LOCUS       DATCUD010000001         2335 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85246, whole genome shotgun sequence.
ACCESSION   DATCUD010000001 DATCUD010000000
VERSION     DATCUD010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85246"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..611)
                     /locus_tag="VIQ99_00005"
     CDS             complement(<1..611)
                     /locus_tag="VIQ99_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007804957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HEY9181547.1"
                     /translation="MSGSAPRSIDEYLQRLRAALVGEDPALIQDALYDAEEYLRSEIA
                     AHAGKSEAEALEAIVGTYGTPDEIAAAYRATEVKVKAALDTPSPRASAEPRSVLASFF
                     AVYLDPRTYSSLFFMLLSMFTGIVYFTFAITGLSLSFGLAVLIIGVPFFLAFIGVARV
                     MSLAECRLLEAITGERMPRRPVHPGAPSGFVARIGAMVSDPRT"
     gene            complement(608..967)
                     /locus_tag="VIQ99_00010"
     CDS             complement(608..967)
                     /locus_tag="VIQ99_00010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEY9181548.1"
                     /translation="MDDSQARKFQKDLNGGLVALVLLAVFAAAQEDLYGYEIAKRLQR
                     ANEGEALFKEGTLYPVLRSLSANGYLTSRIVPSYSGPPRRYYRITDEGRALFAEWRGI
                     WRQTRDFVNRFTEGSAS"
     gene            complement(1005..1262)
                     /locus_tag="VIQ99_00015"
     CDS             complement(1005..1262)
                     /locus_tag="VIQ99_00015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181549.1"
                     /translation="MLGVHERRIALQQIGDAFGELSSLLVAARIEDKRGSPSVMRRSQ
                     EPRAISTRPIDFVPFDYAVAEVACGACIRVRERRLSWIPMY"
     gene            1654..2064
                     /locus_tag="VIQ99_00020"
     CDS             1654..2064
                     /locus_tag="VIQ99_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007224574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181550.1"
                     /translation="MRQPILVLQILVGVVLATPARAHHAFATEFDVNRQVELRGKVTK
                     VELINPHSWIHIEVIGDDGKPVTWMIEGGSPNALVRRGITKNSIPVGSELVIRGYGTR
                     DGSNKAVGRDMTFADGRALFFGGTAAPGEAAATP"
     gene            2061..>2335
                     /locus_tag="VIQ99_00025"
     CDS             2061..>2335
                     /locus_tag="VIQ99_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012523119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181551.1"
                     /translation="MKRLATAAGALLAVLTARAEVLTEIPRAADGHPDLSGVWQTQNT
                     AHWNLEPHVSAYPVVIELGAQFAVPPGHGVVEGGSIPYLPAALAERQ"
BASE COUNT          445 a          755 c          741 g          394 t
ORIGIN      
        1 cacgtgcgtg ggtcgctgac catcgcgccg atgcgtgcga cgaaccccga aggcgcgccg
       61 ggatggacgg gtcggcgcgg catgcgctca cccgtgatcg cctcgagcaa ccggcactcg
      121 gccagcgaca tcacgcgcgc gacgccgatg aacgcgagaa agaacggcac tccgatgatc
      181 agcaccgcga gaccgaacga cagcgacaat cccgtgattg cgaacgtgaa atacacgatg
      241 cccgtgaaca tgctgagcaa catgaagaac agcgacgaat aggttcgcgg atccaagtac
      301 acggcgaaga aactcgcgag cacgctacgc ggctccgcgc tcgcccgcgg actcggcgtg
      361 tcgagagcgg ccttcacctt gacttcggtt gcgcgatacg cagcggctat ttcgtccggc
      421 gtgccgtagg tcccgacgat cgcctcgagc gcctcggctt cggacttgcc ggcgtgagcc
      481 gcgatctcgg atcgcagata ctcctcggcg tcgtacagcg cgtcctggat caatgccggg
      541 tcctcgccaa ccaacgccgc acgcagacgt tgcaggtatt cgtcgatcga gcgcggtgcc
      601 gatccgctca tgatgctgat ccttctgtga agcgattgac gaagtcgcgc gtctggcgcc
      661 agatgccgcg ccactccgcg aacagcgcgc gcccttcatc ggtgatgcgg tagtagcgac
      721 gcggcggacc cgagtacgac ggcacgatcc ggctcgtgag atagccgttg gcgctcaggg
      781 agcgcagcac cgggtacaac gttccttcct tgaacagcgc ttcgccttca ttcgcgcgct
      841 ggaggcgctt cgcgatctcg tagccgtata agtcttcctg cgcggcagcg aagaccgcga
      901 gcaacaccag tgcgacgaga ccgccgttca agtccttctg aaatttgcgg gcttggctat
      961 catccattaa ccagtactgt gcatatcaca ctactagatg tcaactagta cattggaatc
     1021 cacgatagcc tgcgctctcg cacacgaatg caggccccac aggccacttc ggcgaccgcg
     1081 taatcgaaag ggacgaaatc gattggccgc gtcgatatgg ctctcggctc ctgcgagcgc
     1141 cgcatgacgg acggcgagcc gcgtttgtct tcgatccgcg ccgcgacgag caggctcgac
     1201 agctcgccga aggcgtcgcc gatctgctgc agcgcgatcc ggcgctcgtg caccccgagc
     1261 atgatcgacg cggccgtgct ctgctcttcg cctggagcta tggcgtcgta ctgtcgtatt
     1321 gacgcggcag caattcgagg agtcgcgact cggcgaggtg atgcgggaac aacgcgtgat
     1381 ctgcgcggac gagatgaccc accgtgcgac tgcagccttc gagcagcggc tgtggaaaat
     1441 gtaaatgttt ccgtggcaag cgatggagcc gctttcgacc gcgcgaattg cacgtctgat
     1501 cagaagggca tcgcataatc cacggcgtcc gagatcggct tgcccatgac cttcgcgcgg
     1561 cgcgcgcctc gacatttcct gactagtcgt tgccctcggc actcaggcat tatccgaagt
     1621 gcgccgaatc gaacgacgga aggggggccg gccatgcgcc agccgatact ggttctgcaa
     1681 atactcgtag gcgtggtact cgcaacgccg gcacgcgctc atcacgcgtt cgcgaccgaa
     1741 ttcgacgtga accgccaagt cgagctgcgg ggcaaggtca cgaaggtcga gctgatcaat
     1801 ccgcattcat ggatccacat cgaggtcatc ggcgacgacg gcaagcccgt cacgtggatg
     1861 atcgaaggcg gcagcccgaa cgcgctcgtg agacgcggca tcacgaagaa ctcgatcccg
     1921 gtcggctccg agctcgtgat ccgcggctac ggcacgcgtg acggctcgaa caaggccgtc
     1981 ggccgggaca tgacgttcgc cgacgggcgg gcgttgttct tcggcggcac ggcggcaccg
     2041 ggcgaagcgg cagcgacgcc atgaagcgac tcgcgacggc cgcgggcgcg ttactcgccg
     2101 tgctcacggc acgagccgaa gttctcaccg agattccgcg cgccgcggac ggccatcccg
     2161 acctgagcgg cgtctggcag acgcagaaca ctgcacattg gaacctcgag ccgcacgttt
     2221 cggcgtatcc ggtcgtgatc gagctcggcg cgcagttcgc cgtgccgccc gggcatggcg
     2281 tggtcgaggg cggctcgatc ccttatttgc cggctgccct ggccgaacgc cagaa
//
LOCUS       DATCUD010000002         3049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92357, whole genome shotgun sequence.
ACCESSION   DATCUD010000002 DATCUD010000000
VERSION     DATCUD010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92357"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..516)
                     /locus_tag="VIQ99_00030"
     CDS             complement(<1..516)
                     /locus_tag="VIQ99_00030"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9181552.1"
                     /translation="MTAQAKFSWFIPFLGALSALGPLSNDLYVPSLPLVAAGLNANGG
                     AVQLTLSTLLLGLSLGALIYGPLSDQYGRKPVLAAGLAVYVVGGVMAALADDLATLIV
                     WRFLQGLGASSGSVLARAIILDRWRGEQASRALSWMAIVTFLSPVLAPLLGGQIASLG
                     HWPTIFWVHAAA"
     gene            complement(513..1340)
                     /locus_tag="VIQ99_00035"
     CDS             complement(513..1340)
                     /locus_tag="VIQ99_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016452251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extradiol ring-cleavage dioxygenase"
                     /protein_id="HEY9181553.1"
                     /translation="MSLVFAGVCSHAPGITGRAARADARVRDEFYAKLDEMRKRIEAA
                     RPDALIVVAAEHFANFFMNNMPAYCVGMAEHYEGPIEDEQWLAIERHRVPGNAALSRR
                     VIEKLLTDIDVAYAEEWKFDHGIMVPLHFLTPRYDLAVIPVNVNCQGPPLTPLTRAYE
                     FGRALRRACDAQPERIALVGTGGISHWPATPDSGVINEAWDREFLARFLANDREALVS
                     YTDEETLRDAGQGGFEIRTFLTVAGATEGATGELLFYAPIPIFAVGCTVATMTVRSA"
     gene            complement(1337..1648)
                     /locus_tag="VIQ99_00040"
     CDS             complement(1337..1648)
                     /locus_tag="VIQ99_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012202043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-opening dioxygenase subunit LigA"
                     /protein_id="HEY9181554.1"
                     /translation="MSLYYVQKLLYQLNRDPSVRKRFETDRVNLLDDYELTAEERAAI
                     EEGDVGLLYVMGVNGQILMHYAALLGQPWDVYIAAMREGVQKHGPVRAGLYSMLKDRQ
                     R"
     gene            complement(1645..2073)
                     /locus_tag="VIQ99_00045"
     CDS             complement(1645..2073)
                     /locus_tag="VIQ99_00045"
                     /inference="COORDINATES: protein motif:HMM:NF014958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HEY9181555.1"
                     /translation="MYVKPQRDSSLPHLIVEYSANIEDRIALDELLDKLHTCALTTGV
                     FPLGGLRVRAHRADAYRIADKAPENGFVHVTALIGHGRPLDVQQRAGEELFATLTAHL
                     EPLYAKSPLAISLNVQEFHPVLNFKRNNLHEHVKRRGGKP"
     gene            2123..3025
                     /gene="dapA"
                     /locus_tag="VIQ99_00050"
     CDS             2123..3025
                     /gene="dapA"
                     /locus_tag="VIQ99_00050"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006391305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEY9181556.1"
                     /translation="MPQSQKNLAALRGSIPPLITPFTRGAVDYDRYAELVEFQIQQGS
                     HGILVNGTTAEPSTLTTDERNRLVTLAIETATGRVPIVAATGSQSLAESRVLTEHAIA
                     AGADSLLIVTPYYIRPPQRGLVAYYLELAKGHDVPWMIYHIPGRTAVSVTLDTLKAVK
                     ERSPHFVGIKQAVNDLGFVSECLHELGMDFKVFVGLEELSFPMMAVGACGLMNAVGNL
                     RPGVLAKMCDAVVASDFATARALHDQLLEINKAVFFDTNPIPMKYMMKKLGLLADNEH
                     RLPMVSATPELAAKLDGVLERAGL"
BASE COUNT          563 a         1017 c          969 g          500 t
ORIGIN      
        1 tgccgccgca tgcacccaga aaatcgtcgg ccagtggccc agcgacgcga tctgaccgcc
       61 caagagcggc gcgagcaccg gcgataggaa cgtcacgatc gccatccagc tcaaggcccg
      121 cgacgcctgc tcgccgcgcc agcgatcgag gatgatcgcg cgtgcgagca cgctgcccga
      181 cgacgcgccg agcccttgca ggaagcgcca cacgatcaac gtcgcgagat cgtcggcgag
      241 cgcggccatc acgccgccga cgacatagac cgcgagcccg gccgcgagca ccggcttgcg
      301 cccgtattga tccgacagcg gcccgtagat caaagccccg agcgacaacc cgagcagcag
      361 cgtgctgagc gtgagctgca cggcgccgcc gttcgcgttc aagcccgccg cgacgagcgg
      421 cagcgacggt acgtacaggt cgttcgacag agggccgagc gccgagagtg cgcccagaaa
      481 cggtatgaac cagctgaact tcgcttgtgc ggtcacgccg agcgcacggt catcgtcgcg
      541 accgtgcacc ccacggcgaa gatcggtatc ggcgcataga acaggagctc gccggtagct
      601 ccctcggtgg cgccggccac cgtgaggaac gtgcggatct cgaacccccc ctgccccgca
      661 tcgcgcagcg tttcctcgtc cgtatacgac acgagagcct cgcgatcgtt ggcgaggaac
      721 cgcgcgagaa actcccgatc ccacgcctcg ttgatgacgc cggaatcggg cgtcgcgggc
      781 cagtgcgaga tgccgcccgt gccgacgagc gcgatgcgct ccggctgcgc gtcgcacgca
      841 cggcgaagcg cgcggccgaa ctcgtacgcg cgcgtgagtg gagtcaacgg cggcccttga
      901 caattcacgt tcacgggaat cacggccaga tcgtaacgcg gggtcaagaa gtgcagcggc
      961 accatgatgc cgtgatcgaa cttccactcc tcggcgtacg cgacgtcgat gtcggtcaac
     1021 agtttctcga tcacgcgccg cgacaacgcc gcgttgccgg gaacgcgatg gcgctcgatc
     1081 gcgagccact gctcgtcttc gatcggcccc tcgtagtgct cggccatacc gacgcagtac
     1141 gcgggcatgt tgttcatgaa gaagttcgcg aagtgctcgg cggccacgac gatcagcgcg
     1201 tcgggccgcg cggcctcgat gcgcttacgc atctcgtcga gcttcgcgta gaactcgtcg
     1261 cgcacgcgtg cgtccgcacg cgcggcacga cccgtgatac cgggtgcgtg gctacagacg
     1321 cctgcgaaca cgaggctcat cgctgccgat ccttgagcat gctgtacagg ccggcacgga
     1381 ctgggccgtg cttttgcacg ccctcgcgca tcgccgcgat gtagacgtcc cacggctgcc
     1441 cgagcagcgc ggcgtagtgc atcaggatct ggccattcac gcccattacg tacaggagcc
     1501 cgacgtcgcc ttcttcgatc gcggcgcgct cctcggccgt gagctcgtag tcgtcgagca
     1561 ggttcacgcg atcggtctcg aagcgtttgc gcacgctcgg atcgcggttc agctgataca
     1621 acagcttctg cacgtagtag aggctcatgg cttgccgccg cgtcgcttga cgtgctcgtg
     1681 cagattgttg cgcttgaaat tcagcaccgg atgaaactct tgaacgttca gcgagatcgc
     1741 gaggggactc ttcgcataca ggggctcgag atgcgccgtg agcgtcgcga acagctcctc
     1801 gcctgcacgt tgctgcacgt cgagcggccg gccgtggccg atcaacgccg tcacgtgcac
     1861 gaaaccgttt tcgggagcct tgtccgcaat ccgatatgcg tccgctcggt gcgcccgaac
     1921 gcgcaggccg ccgagcggaa acacgccggt cgtaagcgcg cacgtgtgca gcttgtcgag
     1981 caactcatcg agcgcgatcc gatcctcgat gttggcggaa tactcgacga tcaaatgggg
     2041 caaagatgaa tcccgctgcg gcttaacgta cactcgaacg cgactcgaca cggtaaatga
     2101 cggcccaagc cgcgtcaatt tgatgccgca atctcagaaa aacctcgctg cgctgcgcgg
     2161 ctcgatcccg ccgttgatca cgccgttcac ccgcggcgcc gtcgactacg accgttacgc
     2221 agagctcgtc gagttccaga tccagcaggg ctcacacggc atactcgtga acggcacgac
     2281 ggccgagccc tcgacgttga cgacggacga gcgcaatcga ctcgtcacgc tcgcgatcga
     2341 gaccgccacg ggtcgcgtgc cgatcgtcgc ggccacgggc tcgcaatcgt tggccgagag
     2401 ccgcgtgctg accgagcacg cgatcgcggc cggcgccgac tcgttgctga tcgtgacgcc
     2461 gtactacatt cggccgccgc agcgcggact cgtcgcgtat tacctcgagc tcgcgaaggg
     2521 tcacgacgtg ccgtggatga tctatcacat cccgggccgc acggccgtca gcgtcacgct
     2581 cgatacgctg aaggcggtga aggaacgttc gccgcacttc gtcggcatca aacaagccgt
     2641 caacgatctc ggattcgtat ccgagtgcct gcacgagctt gggatggact tcaaagtgtt
     2701 cgtcgggctc gaggagctga gcttcccgat gatggcggtc ggtgcgtgcg gcctcatgaa
     2761 cgcggtcggc aacctgcgcc ccggagtgct cgcgaagatg tgcgatgccg tagtcgcgag
     2821 cgattttgcc acggcgaggg cgttgcacga tcagctgctc gagatcaaca aggccgtgtt
     2881 cttcgatacg aacccgatcc cgatgaagta catgatgaag aagctcgggc tgctcgccga
     2941 caacgagcac cgcctgccga tggtcagcgc gacgccggag ctcgcggcga agctcgatgg
     3001 cgtactagag cgcgcgggtc tgtagcacag atgccaccgt gcgcttctt
//
LOCUS       DATCUD010000003         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35525, whole genome shotgun sequence.
ACCESSION   DATCUD010000003 DATCUD010000000
VERSION     DATCUD010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35525"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..597)
                     /locus_tag="VIQ99_00055"
     CDS             complement(61..597)
                     /locus_tag="VIQ99_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015047742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY9181557.1"
                     /translation="MKFMGRAARMERHHKRHKGGSAINLVSMMDIFTILVFFLLVNSS
                     EVEVLPNAKDIVLPDSTAEEKARESVIVLLTDTQVLVQGRPVAELADVDASDAVIIPE
                     LKAALEDQAGRAILAAEGDDAIADREVTIMGDREIPYSLLKKVMATCTAADYGRLSLA
                     VLQKADNTAGLTVATAGG"
     gene            complement(610..1116)
                     /locus_tag="VIQ99_00060"
     CDS             complement(610..1116)
                     /locus_tag="VIQ99_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY9181558.1"
                     /translation="MSKHRSRRQRHKEAEELNITAFMNLMVVLTPFLLITAVFSRLAI
                     LELNLPAGQSQASADEPPGFQLEITVREAGIEVGDRNAGTLSRIEKVGGDYRLDELSA
                     YLARVKAQFPDKIDATVLLEPEISYQTLVAVMDRVRVAETRDPADNRVVKSDLFPEVS
                     IGDAPVSN"
     gene            complement(1149..1829)
                     /locus_tag="VIQ99_00065"
     CDS             complement(1149..1829)
                     /locus_tag="VIQ99_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005962963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY9181559.1"
                     /translation="MDVYTTMVKFFQEGGLFMYPIAGVLALGLAIAIERWLYLTLTTA
                     KNKALWNAVTPYLKSGNLAGAVQVTSKSQAAIGQIMTYGLNRVRSARRREDVEQAMEE
                     SLMEVMPRLEKRTHYLATFANIATLLGLLGTIVGLISAFTAVSTANPAEKADLLSASI
                     SVAMNTTAFGLVVAIPLLLVHTLLQTKTTEIVDSLEMASVKFLNAITERAADPQPAAP
                     ASKQKAAG"
     gene            complement(1834..>2031)
                     /locus_tag="VIQ99_00070"
     CDS             complement(1834..>2031)
                     /locus_tag="VIQ99_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011828826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181560.1"
                     /translation="TTSITGNAELPKVLYIVPWKRSDLGDLVGRPVNTLLDEVLAPVD
                     PEVFERHLSYYETLHGASQEE"
BASE COUNT          356 a          649 c          637 g          389 t
ORIGIN      
        1 tgtccagggc aggtcgtaga ttcgatagaa aaccgtcgcc gttgcgctca tcggatgacc
       61 ctagccaccg gcggtggcga ccgtgagccc cgccgtattg tcggccttct gtaagaccgc
      121 gagcgacaga cgcccatagt cggcggccgt gcaggtggcc atgacttttt tcagcagact
      181 atacgggatt tcgcgatcgc ccatgatcgt gacctcgcga tccgcgatcg cgtcgtcgcc
      241 ctcggctgcc aggatcgcgc ggcccgcctg atcctcgagc gcggccttga gctcgggaat
      301 gatgacggcg tcggaggcgt cgacgtcggc gagctccgcg accggccggc cctgaaccag
      361 cacttgggtg tcggtcagca agacgatcac cgactcgcgg gccttttcct cggcagtcga
      421 gtcgggcagc acgatgtcct tcgcgttcgg caagacctcg acctcgctcg agttcacgag
      481 caagaagaag acgaggatcg tgaagatgtc catcatcgac acgaggttga tggcggaccc
      541 gcctttgtgg cgcttgtgat gccgctccat acgcgcggcg cgacccatga atttcatcgt
      601 cgcgcgcctc taattcgaca ccggcgcatc gccgatcgag acctcgggaa acaggtcgga
      661 tttcacgact cggttgtccg cggggtcgcg cgtctcggcg acacgcaccc ggtccatgac
      721 cgcgaccagc gtctgataag agatctcggg ctccagcagc accgtggcat cgatcttgtc
      781 cgggaactgt gcttttacgc gcgcgagata cgccgacagc tcgtcgagcc ggtagtcgcc
      841 gccgactttc tcgatgcggc tcagcgtccc cgcgttccgg tcgccgacct cgatacccgc
      901 ttcacgcacg gtgatctcga gctggaaccc cggaggctcg tcggcggatg cctgcgattg
      961 tccggcgggc agattgagct cgaggatcgc gagccgcgag aacacggccg tgatcaacag
     1021 gaacggcgtc agcacgacca tgaggttcat gaacgccgta atgttcagct cctccgcctc
     1081 tttgtggcgc tgccggcgtg aacgatgttt gctcacgaga cgctcctagg tcggctcgac
     1141 ggtcgcggtc agcccgcggc cttttgcttc gacgcggggg cggcgggctg cggatcggcg
     1201 gcgcgctcgg tgatcgcgtt caagaacttc acggaagcca tctcgaggct gtccacgatc
     1261 tcggtcgtct tggtttgcag cagggtatgc acgagcaaca gcggaatcgc gacgacgagg
     1321 ccgaaagcgg tcgtgttcat cgcgaccgag atactggccg agagcaggtc tgccttctcc
     1381 gcggggttcg ccgtcgaaac cgcggtgaac gcgctgatca ggcccacgat cgtaccgagc
     1441 aacccgagca gcgtggcgat gttcgcgaac gtcgcgaggt agtgggtgcg cttctcgagg
     1501 cgcggcatga cttccatcag gctctcttcc atcgcctgct cgacgtcttc gcggcgccgc
     1561 gccgaacgca cacggttcaa gccgtaggtc atgatctgac cgatcgccgc ctgcgacttg
     1621 ctcgtgactt gcaccgcgcc ggccagattg ccggacttca ggtacggagt gacggcgttc
     1681 cacagcgcct tgttcttggc ggtcgtcagc gtcaggtaca gccaacgctc gatcgcgatc
     1741 gcgagaccga gcgccagcac gcccgcgatc ggatacatga acaggccacc ctcctgaaag
     1801 aatttgacca tggtggtata gacgtccatc gactcactcc tcttggcttg cgccgtgcag
     1861 ggtctcgtaa tagctcaggt gccgctcgaa cacttccgga tccacgggcg ccagtacctc
     1921 gtcgagcaat gtgttcacgg ggcggccgac aagatcgccg agatcggacc ttttccaagg
     1981 cacgatgtac agcaccttag gcaattccgc attgcccgtt attgacgtgg t
//
LOCUS       DATCUD010000004         2388 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71056, whole genome shotgun sequence.
ACCESSION   DATCUD010000004 DATCUD010000000
VERSION     DATCUD010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2388)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2388)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2388
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71056"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..905)
                     /locus_tag="VIQ99_00075"
     CDS             complement(<1..905)
                     /locus_tag="VIQ99_00075"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9181561.1"
                     /translation="MRRLLWLVPVVALGGCEQSAPVAAPEVYDAVAVESRDIQVTVDA
                     AGIIEPESTVEVKSKASGEVLKVFGETGDVVEAGTLLVTIDKRTPANNVSQSEAALTA
                     AQARRTIAETQMKRAEALYKSQSLTQADVEKAQLEFANASAEVVRSTVALENARITLE
                     DTDVRAPITGTIIEKTVEPGIVITSPTNAVSGGSVLMKMADLTSVQVRTRVDETDIGK
                     IQPGMFTKVTVAAYPNQPFEGEVLKIEPQAIVEQNVTMFAVLIKIANRGGLLKPGMNA
                     DVQIQIAGREGVAAVPTAALRAETDV"
     gene            complement(908..1606)
                     /locus_tag="VIQ99_00080"
     CDS             complement(908..1606)
                     /locus_tag="VIQ99_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014099065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9181562.1"
                     /translation="MEATIRTHNLQRHYQMGAEMIHALRGVDLTVERGEYVAIMGPSG
                     SGKSTLMNMIGCLDSPDDGEYWLNGKLVSAMNDRELARVRNKEVGFIFQTFNLLPRAN
                     ALHNVELPLIYAGMKRKERMVRAKQALDRVGLGERMMHRPSEMSGGQRQRVAVARALV
                     TEPSILLADEPTGNLDSTTSRDIMLLFDALHAAGHTIVVVTHEHDIAMHARRIITFRD
                     GKIAEDIINKQQIH"
     gene            complement(1710..>2388)
                     /locus_tag="VIQ99_00085"
     CDS             complement(1710..>2388)
                     /locus_tag="VIQ99_00085"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019459670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9181563.1"
                     /translation="SMGKMIRLRAADGHELDAYLAEPKGKAKGGVVVVQEIFGVTDHV
                     KRVADQYAAQGYVAIAPAMFDRIERALTVPYTDVQRGLEHMRKLKWPDTLADVAAAAD
                     EIRRTGLSAVVGFCWGGTVAHVAASDLDIDAAVSYYGGGVAKMLDKKPRCPILYHFGD
                     QDHSIPLPDVEKIKAAYPGSTVHVYPGAAHGFSCDERASFSPRDAQLAFERSIAFLDR
                     QDRPRRT"
BASE COUNT          392 a          796 c          739 g          461 t
ORIGIN      
        1 acgtcggtct cggcgcgcag cgccgccgtc ggcacggccg cgacgccctc acgacccgcg
       61 atctggatct gcacgtcggc gttcatgccg ggcttcagca acccgccgcg attcgcgatc
      121 ttgatcagca ccgcgaacat cgtgacgttc tgctccacga tggcctgcgg ctcgatcttc
      181 agcacctcgc cctcgaacgg ctgattcggg tacgcggcga cggtgacctt cgtgaacatg
      241 ccgggctgaa tcttgccgat gtccgtctcg tcgacgcgcg tgcgcacctg caccgaggtc
      301 agatccgcca tcttcatcag cacggatccg ccgctgaccg cgttcgtcgg cgacgtgatc
      361 acgatgccgg gctcgacggt cttctcgatg atcgtgcccg tgatcggcgc gcgcacgtcg
      421 gtgtcctcga gcgtgatgcg cgcgttctcg agcgccaccg tcgagcgcac gacctctgcg
      481 ctggcattcg cgaactcgag ctgcgccttc tcgacgtcgg cctgcgtcag cgactggctc
      541 ttgtagagcg cctcggcgcg tttcatttgc gtctcggcaa tcgtgcggcg cgcctgggcg
      601 gccgtcagcg ccgcttcgga ttgcgagacg ttgttcgcag gcgtccgctt gtcgatcgtc
      661 acgagcagcg tgccggcctc gacgacatcg ccggtctcgc cgaacacctt caacacctcg
      721 cccgacgctt tcgacttgac ctcgaccgtc gactcgggct cgatgatgcc cgcggcgtcg
      781 accgtgactt ggatatcgcg tgactcgacc gcaacggcgt cgtaaacctc gggcgccgcg
      841 acgggagcgg attgctcgca accgccgaga gcaacgaccg gcaccaacca aagaagtcta
      901 cgcatactca gtgaatttgc tgcttgttga tgatgtcctc cgcgatcttg ccgtcgcgga
      961 aggtgatgat gcggcgcgcg tgcattgcaa tgtcgtgctc gtgcgtcacg accacgatcg
     1021 tgtggccggc tgcgtgtagc gcatcgaaca gcaacatgat gtcgcggctc gtcgtcgaat
     1081 cgaggttgcc cgtaggctcg tcggccaaga ggatgctcgg ctccgtgacg agggcgcgag
     1141 ccacggccac gcgctgccgt tgacctccgg acatttcgct cggccggtgc atcatgcgct
     1201 cgcccaagcc cacgcgatcg agcgcttgct tcgcgcgcac catgcgttcc ttgcgcttca
     1261 tgccggcgta gatcaacggg agctcgacgt tgtgcagcgc gttcgcgcgc ggcaacagat
     1321 tgaacgtctg gaagatgaag ccgacttctt tgttccgaac acgcgcgagc tcgcgatcgt
     1381 tcatcgccga aacgagctta ccgttgagcc agtattcgcc gtcgtccggg gagtcgaggc
     1441 aaccgatcat gttcatcaac gtcgatttgc ccgagcccga aggacccatg atggcaacgt
     1501 actcgccgcg ctcgaccgtg agatccacgc cgcgcagggc gtggatcatc tcggcgccca
     1561 tttggtaatg gcgctgcaag ttgtgcgtgc gaatcgtcgc ttccatgggc gtcttgaacg
     1621 agccgtcaat tcatcggccg caattatggc atcgcgacac cgaaagccga ttcgcgacga
     1681 tgcgcaaatc cttaatgcct atagcattct taagtccgac gaggcctgtc ttgtcggtcg
     1741 agaaatgcga tcgaacgctc gaacgcgagc tgcgcgtctc gtgggctgaa gctcgcgcgc
     1801 tcgtcgcagc tgaagccgtg cgcggcgccc ggatagacgt gcacggtgct gcccggataa
     1861 gcggccttga tcttctcgac atcggggagc ggtatcgaat gatcctggtc gccgaagtgg
     1921 tacaggatcg gacagcgcgg cttcttgtcc agcatcttgg ccacgccgcc gccgtagtaa
     1981 gacacggccg cgtcgatgtc gagatcgctc gcggccacgt gagcgaccgt gccaccccag
     2041 cagaaaccga cgacggccga gagaccggtg cggcgaatct cgtcggcagc ggccgcaacg
     2101 tcggccagcg tgtcgggcca cttcagcttg cgcatgtgct cgaggccgcg ctgaacgtcc
     2161 gtgtacggca cggtcagagc gcgctcgatg cggtcgaaca tcgcgggcgc gattgccacg
     2221 tagccctgcg ccgcgtactg gtccgcaact cgcttcacgt gatccgtgac gccgaagatc
     2281 tcctgcacga cgacgactcc gcccttcgcc ttccccttcg gctccgcgag gtacgcatcg
     2341 agctcgtgcc cgtccgcggc tcgcagtcga atcattttgc ccatgctc
//
LOCUS       DATCUD010000005         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92377, whole genome shotgun sequence.
ACCESSION   DATCUD010000005 DATCUD010000000
VERSION     DATCUD010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92377"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VIQ99_00090"
     CDS             complement(<1..293)
                     /locus_tag="VIQ99_00090"
                     /inference="COORDINATES: protein motif:HMM:NF015557.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEY9181564.1"
                     /translation="MEPMAWVALVIFAITIVVVIANVVDATIAALIGVAVLIWFGVMT
                     EVDAFNYVDWNVMAILVAIWLIAGYFGKSGVPSWLSVQALKLSRGRPGLLVMIL"
     gene            complement(373..>1587)
                     /locus_tag="VIQ99_00095"
     CDS             complement(373..>1587)
                     /locus_tag="VIQ99_00095"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011830840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEY9181565.1"
                     /translation="NELGIDVRRIQWRRVVDMNDRALRDIVIALGGTANGYPREDGFD
                     IVVASEVMAIFCLATSLEDLKKRLGNIVVGYSKDQKPITARDLNAHGAMTVLLKDALA
                     PNLVQTLENNPAFIHGGPFANIAHGCNSVIATQAALKLADYVVTEAGFGADLGAEKFL
                     DIKCRKTGLAPSATVIVATIRALKYHGGVDVKEVNKENLGALEKGLANLERHVENVTK
                     VYNMPCVVSFNRFTFDTPKELDLVKRTVGRLGVPFVLATHWADGGKGAEELARIVVDL
                     CDQPSKPTFVYEDSDTLWDKINKIARKVYRAADVTADAKVRAQIKKLQDDGYGHYPVC
                     VAKTQYSFSTDPGLRNAPTGHVVNVREVRLAAGAEFIVMICGDIMTMPGLPKVPSAVK
                     IDVVDGKVVGLF"
BASE COUNT          259 a          535 c          504 g          289 t
ORIGIN      
        1 aggatcatca ccaggaggcc ggggcgaccg cgcgagagct tcagcgcctg caccgagagc
       61 cagctcggca cgccgctctt gccgaagtag ccggcgatca gccagatcgc caccaggatc
      121 gccatcacgt tccagtcgac gtagttgaac gcgtcgacct cggtcatcac gccgaaccag
      181 atcaacaccg cgaccccgat cagcgccgcg atcgtcgcgt cgacgacatt cgcgatcacg
      241 acgacgatcg tgatcgcgaa gatgacgagc gcgacccacg ccatcggttc catttctacc
      301 gcacctcccc tcggtgaccg ccgttgcccg gcggagcggg cgatcgtgtt cgcttcttct
      361 ccggcgccgc gctcagaaga gcccgaccac tttcccgtcc acgacgtcga tcttgaccgc
      421 cgagggcacc ttcggcagcc ccggcatggt catgatgtcc ccgcagatca tgacgatgaa
      481 ctccgcgccg gcggcgagcc gcacctcgcg gacgttgacc acgtgcccgg tgggagcgtt
      541 gcgcagcccg gggtcggtcg agaacgagta ctgggtcttc gccacgcata ccgggtagtg
      601 gccatagcca tcgtcctgca gcttcttgat ctgcgcgcgc accttggcgt cggccgtcac
      661 gtccgccgcg cggtagacct tgcgcgcgat cttgttgatc ttgtcccaca gagtgtcgga
      721 gtcctcgtag acgaacgtcg gcttcgacgg ctggtcgcac aggtcgacga cgatgcgcgc
      781 gagctcctcc gcacccttac ccccgtcggc ccagtgcgtc gccagcacga agggcacgcc
      841 gagcctgccg acggtgcgct tgacgaggtc gagctccttc ggggtgtcga aagtgaagcg
      901 gttgaacgaa acgacgcaag gcatgttgta gaccttggtc acgttctcga cgtggcgctc
      961 gaggttcgcg aggccctttt ccagcgcgcc aaggttctcc ttgttcacct ccttgacgtc
     1021 gacgccgccg tggtacttga gcgcgcggat cgtcgccacg atgaccgtcg cgctgggcgc
     1081 gaggccggtc ttgcggcact tgatgtcgag aaatttttcc gcgccgaggt cggcgccgaa
     1141 gcccgcctcg gtcaccacgt aatcggcgag cttgagcgcg gcctgggtcg cgatcaccga
     1201 gttgcagccg tgggcgatgt tggcgaacgg gccgccgtgg atgaacgcgg ggttgttctc
     1261 cagcgtctgc accaggttgg gcgcgagcgc gtccttcagc agcaccgtca tcgcgccatg
     1321 cgcgttcaga tcccgcgccg taatgggttt ttggtctttt gaataaccga cgacgatgtt
     1381 tccgaggcgc ttcttcaggt cctcgagcga ggtggcgaga cagaagatcg ccatcacctc
     1441 ggaagccacg acgatgtcga acccgtcctc gcgcggatag ccgttggcgg tgccgccgag
     1501 cgcgatcacg atgtcgcgca gcgcgcggtc gttcatgtcg acgacccgcc gccactggat
     1561 gcgccgcacg tcgatgccga gctcgtt
//
LOCUS       DATCUD010000006         5052 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56856, whole genome shotgun sequence.
ACCESSION   DATCUD010000006 DATCUD010000000
VERSION     DATCUD010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5052
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56856"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..236
                     /locus_tag="VIQ99_00100"
     CDS             <1..236
                     /locus_tag="VIQ99_00100"
                     /inference="COORDINATES: protein motif:HMM:NF025704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4398 domain-containing protein"
                     /protein_id="HEY9181566.1"
                     /translation="APPVQEMSDARQAIMAAEQADAARLAADTLSDARRFLAEAERQI
                     QEEAYGPARMNAVRAKNRAVQALRSSQPTDSTR"
     gene            257..523
                     /locus_tag="VIQ99_00105"
     CDS             257..523
                     /locus_tag="VIQ99_00105"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEY9181567.1"
                     /translation="MAVRCLVSGRVQGVYYRSATVAEAQRLKLDGWVKNLADGRVEVV
                     AAGAPVAVTTLAGWLWQGPPAARVESVLLEEWAEAVPQGFVVAK"
     gene            complement(530..1243)
                     /locus_tag="VIQ99_00110"
     CDS             complement(530..1243)
                     /locus_tag="VIQ99_00110"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019342520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY9181568.1"
                     /translation="MYLSLPLLNTALECDPGRGATGSTARMISVVGNTVPPTSRLPLR
                     SLLAVAWLATSVFGGAEAAVPMSDGRSGPDPELREILVSVIADSNSFADRFDAEVWLT
                     DMSRRLARQVPDPSERLKILRAVHAQATLAGVEPELVLAVIDVESNFDRFAISSATAL
                     GLMQVMPFWVPELGYKDKNQLFDIEINVLLGCRILKYYLEMENGDLVKGLARYNGSVG
                     KRWYADRVIERLRTKWFQH"
     gene            1357..2118
                     /gene="pssA"
                     /locus_tag="VIQ99_00115"
     CDS             1357..2118
                     /gene="pssA"
                     /locus_tag="VIQ99_00115"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019463722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEY9181569.1"
                     /translation="MDGRYSSTRRKGIYLLPNLLTTGGLFAGFYAIVASIDGNFSSAA
                     VAIFAAMLLDGLDGRVARWTSTASEFGKEFDSLADMVSFGLAPAIVVYQWGVERLAEY
                     GAVWGRLGWLAAFLYVAAAAFRLARFNTNVAQDRRFFQGLASPAAAAGVASMIWLATT
                     YEGMDRLAALVAGVTITAVAGLLMMSRFAYVSFKDVNPGKRLRFAQLVLIPLVIIFIA
                     LEPPVTVFALFVVYAASGPVAWLWRRRKRQDPVAP"
     gene            2115..2813
                     /locus_tag="VIQ99_00120"
     CDS             2115..2813
                     /locus_tag="VIQ99_00120"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY9181570.1"
                     /translation="MNEVRSRYLAELGIPVFTLRTPKRAAAETASIVAEPPSALTDRV
                     ASEEVWSELAERVRGCMRCALHKTRTQTVFGVGRRDARLLVIGEAPGADEDRQGEPFV
                     GRAGQLLNAMLRSIGLPRGEVYIANILKCRPPNNRDPLPEEASCCTPYLSQQIALVQP
                     RVLLAVGRISAQWLLQTDTPIGRLRGRALTFGERNIPLVVTYHPAYLLRSPLAKATAW
                     TDLCLVKDLLDQSQ"
     gene            2810..3283
                     /gene="rimI"
                     /locus_tag="VIQ99_00125"
     CDS             2810..3283
                     /gene="rimI"
                     /locus_tag="VIQ99_00125"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008215991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEY9181571.1"
                     /translation="MSAALHPRTEIRLMQPADLKAVAAVERAAYQYPWSLGIFRDCLL
                     AGYQCLVLDVAGSVTGYGIMSIAAGEAHLLNLCVHPNAQHFGYGRRLLNALLLRAAEA
                     DADKVFLEVRPSNEIALRLYRSAGFEQIGIRPAYYQADHGREDAVILAATLQTSR"
     gene            3302..4888
                     /locus_tag="VIQ99_00130"
     CDS             3302..4888
                     /locus_tag="VIQ99_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEY9181572.1"
                     /translation="MHEHLKRRTFAIISHPDAGKTTLTEKLLLFGGAIQMAGAVKGRK
                     ATRHATSDWMRLEQERGISITSSVMQFPYGDAVINLLDTPGHEDFSEDTYRTLTAVDS
                     ALMVIDAAKGVEARTIKLMEVCRLRTTPIISFINKLDRDGRPPVELLDDIESVLDIAC
                     TPMTWPIGMGREFRGIYHLAEDVAHLYQNRDGSRLPEVRQVRGLASPALAAALDERTV
                     AELRESVELVRGATPAFDHAAYLVGKQTPVFFGAAIHNYGIRELLDAFVKLAPPPQPR
                     ATNLRLVSPDESAFSGFVFKIQANMDPAHRDRIAFLRICSGAYEPGMRMYHTRLEREV
                     RVGDAITFMAADRQHVEEAFAGDIIGLHNHGTINIGDSFTQGEPLVFTGIPSFAPELF
                     RRAVLRDPLKLKALQKGLAQLCEEGATQLFRPLLGNDLILGAVGPLQFEVAAYRLRDE
                     YGVEAAFESVAVVAARWVRCDDRAHLDEFAKKLGVNVARDHSGELVYLAPSTVSLALT
                     QERWPKIRFFTTRELSSAAA"
BASE COUNT          844 a         1578 c         1712 g          918 t
ORIGIN      
        1 cggcgccgcc ggttcaagag atgagcgatg cgcgtcaggc gatcatggcc gcagaacagg
       61 ccgacgccgc acgtctcgcc gccgacacct tgagcgacgc tcgacggttc ctggctgaag
      121 ccgagcgcca aatccaagaa gaagcgtacg gcccggctcg catgaacgcc gtgcgtgcga
      181 agaatcgcgc agttcaagca ctgcgctcga gtcagccgac cgactcgaca cgctgatcgt
      241 gacgacttcc gcttcgatgg cggttcgctg tttggtctcg ggacgcgtgc agggcgtgta
      301 ctaccgttcg gcgaccgttg ccgaagcgca gcgactgaaa ctcgatggtt gggtcaagaa
      361 tctcgccgac ggccgtgtgg aggtcgtcgc agcaggagcg ccggtggcgg tgacgacact
      421 cgcgggctgg ctgtggcaag gaccgcccgc ggcgcgcgtg gaatccgtgt tgctcgagga
      481 atgggcggaa gccgttccgc aagggttcgt ggtcgcgaaa tagtcccgct cagtgctgga
      541 accacttcgt ccgtagacgc tcgatcacgc ggtccgcata ccaacgcttg ccgacgctgc
      601 cgttgtaacg cgcgagaccc ttcacgagat cgccgttctc catctcgagg taatatttga
      661 gaatgcggca gccgagcagg acgttgatct caatgtcgaa cagctgattc ttgtctttat
      721 agccgagctc tggcacccag aacggcatca cctgcatgag cccgagtgcc gtggccgacg
      781 agatcgcgaa gcgatcgaag ttgctttcga catcgatcac ggcgagcacg agctcgggct
      841 cgacgcccgc gagcgtagcc tgcgcatgga cagcccgcag tatcttcagc cgctccgagg
      901 gatccggaac ttggcgcgcg agccgtcgcg acatgtccgt gagccacact tcggcgtcga
      961 accgatccgc gaagctattg gagtcggcga tcaccgagac gaggatctcg cgcagctccg
     1021 ggtccggccc ggagcggccg tcgctcatgg ggaccgccgc ttcggcgccg ccgaagacgg
     1081 aagttgcgag ccacgcgact gcgagcagcg agcggagcgg caagcgactg gttggcggca
     1141 ctgtgttacc cacgacggaa atcatgcgcg cagtcgagcc ggttgccccg cgacccgggt
     1201 cacattcgag cgccgtgttc agcaacggca gactcaggta cattggctcg actccggcgc
     1261 gccgcacggc cgacgccgcg gattgtagcg gcggcggcgc attgcggcca agggccgagc
     1321 gcgcgaaggg tcggtggaaa aggaactcga accgaagtgg atggccgata cagcagcacg
     1381 cgccgcaagg gcatctatct cctgccgaac ctgctgacga cgggtgggct gttcgcgggg
     1441 ttctatgcga tcgtggcctc gatcgacggc aatttctcct cggccgcggt cgcgatattc
     1501 gccgcgatgt tgctcgacgg tctggacggg cgcgtcgcgc gttggacgag cacggcgagt
     1561 gagttcggca aggagttcga cagccttgcg gacatggttt cgttcggtct cgcgccggcg
     1621 atcgtcgttt accaatgggg agtcgagcgg cttgccgagt acggggccgt ttggggccgg
     1681 ctcggttggc tcgcggcgtt tctgtacgtg gcggcagcgg cttttcgctt ggcgcgtttc
     1741 aacaccaacg tcgcgcagga tcggcgtttc tttcaggggc tcgcgagccc ggcggccgcc
     1801 gccggcgtcg catcgatgat ctggctcgcg accacgtacg aaggcatgga tcggctcgcg
     1861 gcgctcgtcg cgggcgtgac gatcaccgcc gtcgcgggat tgctgatgat gtcgcgattc
     1921 gcgtacgtga gcttcaagga cgtgaacccc ggcaaacgat tgcgttttgc ccagctcgtg
     1981 ctgatcccgc tcgtgatcat cttcatcgcg ctggaaccgc ctgtgaccgt gttcgcgttg
     2041 ttcgtcgtgt acgctgcgtc gggaccggtc gcttggttgt ggcgtcgccg caagcgccag
     2101 gacccggtgg cgccatgaat gaggtccgga gccgctatct cgcggagctc ggtataccgg
     2161 tgttcacgct ccgaacgccc aagcgggcgg cggcagagac cgcatcgatc gtcgcggagc
     2221 cgccgtccgc gctcaccgat agggtcgcga gcgaggaggt ctggtcggag ctcgcagagc
     2281 gagttcgtgg ctgcatgcgc tgtgcgctgc acaagactcg gacccagacc gtattcggcg
     2341 tcggccgtcg cgacgcgcgg ttgctcgtga tcggcgaggc gccgggagcc gacgaggaca
     2401 ggcagggcga accgttcgtc ggccgcgcag ggcaattgct gaacgcgatg ctgcgttcga
     2461 tcggcttgcc tcgtggcgag gtgtacatcg cgaacattct gaagtgccgc ccgccgaaca
     2521 accgggatcc gctaccggaa gaggcgagtt gttgcacgcc atacctctcg cagcagatcg
     2581 cactcgtgca accgcgcgtg ctgttggcgg tcggccggat ctcggcgcaa tggttgttgc
     2641 agacggatac cccgatcggt aggctgcgtg ggcgagccct gaccttcggt gagcgtaata
     2701 tcccgctggt cgtgacgtat catccggcct acttgctgcg tagcccgctc gcaaaagcga
     2761 ccgcgtggac cgatctctgt ctcgtcaagg acctattgga ccaatcgcaa tgagcgccgc
     2821 cctccatccg cgcacggaga ttcgcctgat gcagccggcc gatctcaagg ccgtcgcggc
     2881 tgtcgagcgc gcggcgtatc aatatccgtg gagcctcggg atctttcgcg actgcctgct
     2941 cgctggttac cagtgtctgg tgctcgacgt cgccggtagc gtcacgggtt acggcatcat
     3001 gtcgatcgcg gccggggagg cacacctgct gaacttgtgc gtgcatccga acgcccagca
     3061 tttcggttat ggccgacggc tgttgaatgc gctgctgctc cgggctgccg aggccgatgc
     3121 cgacaaggtg ttcctcgaag tgcggccgtc gaacgagatc gcattacggc tgtatcgttc
     3181 cgccggtttc gagcagatcg gcattcgtcc ggcctactat caggccgacc atggccgtga
     3241 agacgccgtg atactcgctg cgactctgca gacctctcgc tgatcttctc ccggcacccg
     3301 catgcacgag cacctgaaaa ggcgaacgtt cgcgatcatt tcgcatcctg acgccggcaa
     3361 gaccacgctg accgagaagc tgctgctgtt cggcggcgcg atccaaatgg ccggcgccgt
     3421 gaaggggcgc aaggcgacgc gtcacgcgac gtcggattgg atgcggctcg agcaggagcg
     3481 cggtatctcg atcacgtcgt cggtgatgca gttcccgtac ggcgatgcgg tcatcaacct
     3541 gctcgatacg ccggggcacg aggacttttc ggaggatacg taccgaacgc tgacggccgt
     3601 cgacagcgcg ctgatggtca tcgacgccgc gaaaggcgtg gaggcgcgca ccatcaagct
     3661 catggaggtt tgtcggctgc gcacgacgcc gatcatcagc ttcatcaaca agctcgaccg
     3721 cgacggccgc ccgcctgtgg agttgctcga cgacatcgag tcggtgctcg acatcgcgtg
     3781 cacgccgatg acgtggccga tagggatggg gcgcgagttc cgcggcatct atcacctcgc
     3841 cgaggatgtc gcgcatctct accagaaccg cgacggcagc cgcttgcccg aagtgcgcca
     3901 agtgcggggt ctcgcgagcc cggcgcttgc ggcggcgctc gacgagagga ctgtggccga
     3961 gctccgcgag tcagtggagc tcgtgcgcgg cgcgacgcct gcgttcgatc atgctgcgta
     4021 tctcgttggc aagcagacgc ccgtgttttt cggcgcggcg attcacaact acgggatccg
     4081 cgagctgctc gacgcgttcg tgaagctcgc gccgccaccg cagccgcgcg cgaccaatct
     4141 tcggctcgtg tcacctgatg agagcgcgtt cagcggcttc gtgttcaaga ttcaggcgaa
     4201 catggatcct gcgcatcgcg atcgcatcgc attcttgagg atctgctcgg gcgcctacga
     4261 gcccgggatg cgcatgtatc acacgcgcct cgagcgcgag gtcagagtcg gcgatgcgat
     4321 cacgttcatg gccgccgacc gccagcacgt cgaggaggcg ttcgccggcg acatcatcgg
     4381 cctgcacaac cacggcacga tcaacatcgg tgacagcttc acgcaaggcg agccgctcgt
     4441 gttcacgggc atcccgagct tcgcgccgga gctctttcgc cgcgccgtgc tccgtgatcc
     4501 gctgaagctc aaggcgctgc agaaaggtct cgcacagctg tgcgaggagg gcgcgactca
     4561 gctgttccga ccattgctcg gcaacgactt gatcttgggc gccgtcgggc cgttgcagtt
     4621 cgaggtcgcc gcgtatcggc tgcgggacga gtatggcgtg gaggcggcgt tcgagagtgt
     4681 cgccgtggtg gcggcgcggt gggtacgctg cgacgatcgg gcgcacctcg acgagttcgc
     4741 gaagaagctc ggtgtgaacg ttgcacgcga tcattccggc gagctcgttt atctcgcgcc
     4801 gagcacggtg agtctcgcgc tgacacagga gcggtggccg aagattcggt tcttcacgac
     4861 ccgcgagctg agctcggcgg ctgcgtgagc ctatcggctt gggacggcgc gaagcgcggc
     4921 gacttcctgc tcgagcttga gcaacgccgt gccgtccgcg tcgggttcgt agcgggccgc
     4981 caaatacaac gccgcgacgc tgtgaattcg tgacgcttgc tgcggtagcg cacgcgcagc
     5041 ccgggtcgca ta
//
LOCUS       DATCUD010000007         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99477, whole genome shotgun sequence.
ACCESSION   DATCUD010000007 DATCUD010000000
VERSION     DATCUD010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99477"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..817
                     /locus_tag="VIQ99_00135"
     CDS             <1..817
                     /locus_tag="VIQ99_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013396875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY9181573.1"
                     /translation="EHANDYGVSKRKAEDVLLAHHRATGARLAIYRLPNVFGKWCRPN
                     YNSVVATFCHNIARDLPIRIDDASRTLSLVYVDDVVAELVRCVDGTLPAATFGAVQPV
                     YEATVGELAEKLREFRRCRETLTLGAVGAGLPRALYATYISYLPTERFVYDLHKHEDP
                     RGVFVEFVKSEVGGQLSFFTAHPGVTRGSHYHHSKTEKFLVVKGEALFKFRHLITQER
                     HEVRTSGERPQVVETVPGWVHDITNVGQTEMTVMLWANEVFDRKQPDTYASTV"
     gene            828..>1821
                     /gene="wecB"
                     /locus_tag="VIQ99_00140"
     CDS             828..>1821
                     /gene="wecB"
                     /locus_tag="VIQ99_00140"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003183863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEY9181574.1"
                     /translation="MKVMTVVGTRPEIIRLARVIAKLDRYTEHVLVHTGQNYDYELNE
                     IFFKDLDVRKPDHFLSAAGATGAETIGRVIIATDALLATVKPDAMLILGDTNSCMAAL
                     PAKRRKIPVFHMEAGNRCFDQRVPEEINRRLVDHLADINLTYSSIAREYLLREGLSPE
                     TVIKTGSPMFEVLSHYRAGIDASPVLAELGLTANEFFVVSAHREENVDGDASFGKLVA
                     LLSSLAETYRLPVVVSTHPRTQKRIDTTGAKFHKGVRLVKPMGFKAYNKLQLSARAAL
                     SDSGTITEESSILNFPALNLREAHERPEGMEEGAVMMVGLDTDRVHQALAVLADQ"
BASE COUNT          328 a          613 c          596 g          284 t
ORIGIN      
        1 cgagcacgcg aacgactacg gcgtaagcaa gcgcaaggcc gaggacgtgc tgctcgcgca
       61 ccaccgcgcc accggtgcgc ggctcgcgat ctatcggctg ccgaacgtgt tcggcaaatg
      121 gtgccggccg aactacaact cggtcgtcgc gacgttctgt cacaacatcg cgcgcgatct
      181 gccgatccgc atcgacgatg cgagcaggac gctgtcgctc gtgtacgtcg acgacgtcgt
      241 ggccgagctc gtgcgctgtg tcgacggcac gctgccggcc gcgacgttcg gcgccgtgca
      301 gcccgtgtac gaagcgaccg tcggcgagct cgcggaaaag ctccgcgaat tccggcgctg
      361 ccgcgagacg ctgacgctcg gcgccgtggg cgccgggttg ccgcgcgcgc tgtacgcgac
      421 gtacatcagc tacttgccga ccgagcggtt cgtgtacgac ctgcacaagc acgaggatcc
      481 gcgcggcgta ttcgtcgagt tcgtgaagtc ggaggtgggc ggccagctgt cgttcttcac
      541 ggcgcacccc ggcgtcacac gcggcagcca ctaccatcac tcgaagaccg agaagttcct
      601 cgtcgtcaaa ggcgaggcgc tgttcaagtt ccgccacctg atcacgcagg aacgccacga
      661 ggtccgcacg tccggcgagc ggccgcaggt cgtcgagacc gtgccgggct gggtccacga
      721 catcacgaac gtgggccaga ccgagatgac cgtgatgctg tgggccaacg aggttttcga
      781 tcgtaagcag ccggatacct atgcctcgac cgtctgacac gccgcgcatg aaggtcatga
      841 ccgtggtcgg cacgcggccc gagatcattc ggctcgcgcg cgtgatcgcg aagctcgacc
      901 gctacaccga gcacgtgctc gtgcacacgg gccagaacta cgactacgag ctcaacgaaa
      961 tcttcttcaa ggacttggac gtccggaagc ccgatcattt cctgagcgcc gcgggcgcga
     1021 ccggcgccga gacgatcggc agagtcatca tcgcgaccga cgcgctgctc gcgaccgtga
     1081 agcccgacgc gatgctgatc ctgggcgaca cgaacagctg catggccgcg ctgccggcga
     1141 agcgccgcaa gattccggtg ttccacatgg aggccggcaa ccgctgcttc gaccagcgcg
     1201 tgcccgagga gatcaaccgc cgcctcgtcg atcacctggc cgacatcaat ctcacgtaca
     1261 gctcgatcgc gcgcgagtac ctgctccgcg aagggctgtc gccggagacc gtgatcaaga
     1321 ccggcagccc gatgttcgag gtattgagcc actaccgtgc cggcatcgac gcgtcgccgg
     1381 tgctcgcgga gctcggcctt acggccaacg agttcttcgt cgtcagcgcg catcgcgagg
     1441 agaacgtcga cggcgatgca agcttcggca agctcgtcgc gctcttgagc tcgttggccg
     1501 agacgtaccg gctgcccgtc gtcgtctcga cgcacccgcg cacgcagaag cgcatcgaca
     1561 cgaccggcgc gaagtttcac aagggcgtcc ggctcgtgaa gccgatgggc ttcaaggcct
     1621 acaacaagct ccagctctcg gcgcgcgcgg cgttgtcgga cagcggcacg atcaccgagg
     1681 agtcgtcgat cctgaatttc ccggcgttga acctccgtga ggcgcacgag cggcccgagg
     1741 gcatggagga gggcgccgtg atgatggtgg gcctcgacac cgaccgcgtg caccaggcgc
     1801 ttgccgtgct cgcggaccag c
//
LOCUS       DATCUD010000008         2460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42656, whole genome shotgun sequence.
ACCESSION   DATCUD010000008 DATCUD010000000
VERSION     DATCUD010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42656"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..949)
                     /locus_tag="VIQ99_00145"
     CDS             complement(<1..949)
                     /locus_tag="VIQ99_00145"
                     /inference="COORDINATES: protein motif:HMM:NF020068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HEY9181575.1"
                     /translation="MTPRCVRHFAAWLAGIGAGVAALPGATQPAPGVPLVRTDTATFA
                     EIAVEGSSVLEGDEIDALTSPYENRPITFENLQALRQELSRRYVDRGYVTSGVLLPDQ
                     TANDRVVLQAVEGQLTSVVVEGNRRFSDAAIERRTVHYVETPLNIADLQRGLRTLQND
                     PLVERINAELMPGEALGQSTLRVGVTERKPLELTAFAGNDRAASIGENHAGVGVTYRG
                     LVGNGDALTGRFGGTDGAYDNVLQYHVPLAPGGMALDISVSEQDADIVEEPFTAIDIT
                     SRIETFNVTASRPFVDVADRSLRGFVGFEHMRSESTLLDS"
     gene            complement(958..>2460)
                     /locus_tag="VIQ99_00150"
     CDS             complement(958..>2460)
                     /locus_tag="VIQ99_00150"
                     /inference="COORDINATES: protein motif:HMM:NF024180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAT domain-containing protein"
                     /protein_id="HEY9181576.1"
                     /translation="SSLELATEALRIATDSGDAALIAAARAELGAEHMIAGNPEQALQ
                     ETRLAALAAQNADLDELQYRFEWQLGRVLRDAGRADDALLAYSAAVATLEGTTVAAAT
                     SRRGFRRNVLPLYEEYADVMLAATRGSSGSDATAALRALQRNLEQLRIAEIRNYFENQ
                     CSVPVVFDRPPSIDRAVVIYPMSFADRLELLVSSGDDVTQITVPVSDADLTRTVRLLR
                     DAIERSDSGSAYLPHAQRLYSWLIAPLRQLLERIEPDTLVFVPDGPLRTIPLAVLHDG
                     ERFLIQHYIVATTPGLSLVGAIDVEPVSRVLVNGIIAPTQGFTGLPFVAEELRSIERT
                     FPSRVYADDEFVTATLEREIVAGGYSVVHMATHAQFESDYRRSFLLAHDDVITMDRLE
                     DVMGSQRFTDKPVDLLVLSACQTAAGDERAALGLAGVAVKAGARSALASLWFVNDEST
                     ARLIAEFYRRLADEDGKAAALRGAQLLLLNDERYAHPAYWAPFLMIGDWR"
BASE COUNT          385 a          823 c          855 g          397 t
ORIGIN      
        1 gcgagtcgag cagcgtgctc tcgctgcgca tgtgctcgaa gccgacgaag ccgcgcagcg
       61 agcggtccgc cacatcgacg aacggccggc tggccgtgac gttgaacgtt tcgatccggc
      121 tcgtgatgtc gatggccgtg aacggctcct cgacgatgtc ggcgtcttgc tcgctgaccg
      181 agatatcgag cgccatgccg cccggcgcca acggcacgtg atactgcaac acgttgtcgt
      241 acgcgccgtc cgtgccgccg aagcggcccg tcaacgcatc gccgttgccg acgaggccgc
      301 gatacgtgac gccgacgcca gcgtgattct cgccgatcga agccgcgcgg tcgttgcccg
      361 cgaacgccgt gagctcgagc ggcttgcgtt ccgtgacgcc gacgcgcagc gtgctctggc
      421 cgagcgcctc acccggcatc agctccgcgt tgatgcgctc gaccaacggg tcgttctgca
      481 aggtgcgcag cccgcgctgc aggtcggcga tgttcagcgg cgtctcgacg tagtgcacgg
      541 tgcgccgctc gatcgcggcg tcgctgaagc ggcgattgcc ctcgacgacc acggacgtga
      601 gctgtccctc gacggcctgg agcacgacgc ggtcgttcgc ggtttgatcc ggaagcagaa
      661 cgccggacgt cacgtagccg cgatcgacgt agcggcgcga cagctcctgt cgcagcgctt
      721 gcaggttctc gaatgtgatc gggcgattct cgtacgggct cgtgagcgca tcgatttcgt
      781 cgccctcgag aacggagctg ccttcgaccg cgatctccgc gaacgtcgcc gtatcggtgc
      841 gcacgagcgg cacgcccggg gcgggttgcg tcgcgcccgg caatgccgcg acgccggcgc
      901 caatgccggc gagccacgca gcgaaatgtc gaacgcagcg gggcgtcatc gccgttccta
      961 ccgccagtcg ccgatcatca agaacggcgc ccagtaggcc gggtgcgcgt accgctcgtc
     1021 gttcaagagc agcagctgag cgccgcgcag cgccgcggcc ttgccgtctt cgtccgcgag
     1081 gcgccgatag aactccgcga tcagtctcgc cgtcgactcg tcgttcacga accacagaga
     1141 cgcgagggca ctgcgcgccc cggctttcac ggcgacgccg gcgaggccga gcgccgcacg
     1201 ctcgtcgccg gccgcggttt ggcaggcgct gagcacgagc aagtcgacgg gcttgtccgt
     1261 gaatcgctgg ctgcccatca cgtcctcgag cctatccatc gtgatcacgt cgtcgtgcgc
     1321 gagcaggaac gagcggcgat agtcggactc gaactgcgcg tgtgtcgcca tgtgaacgac
     1381 cgagtagccg ccggcgacga tctcgcgctc gagcgtggcc gtcacgaact cgtcgtccgc
     1441 gtagacgcgc gaagggaacg tgcgctcgat gctacggagc tcctcggcga cgaacggcag
     1501 gccggtgaag ccctgcgtcg gggcgatgat gccgttcacg aggacgcggc tcacgggctc
     1561 gacgtcgatc gcgccgacga gcgacaggcc cggtgtcgtc gcgacgatgt aatgttgaat
     1621 caggaagcgc tctccatcgt ggagcaccgc gagcgggatc gttcgcagcg gcccgtccgg
     1681 aacgaacacc agcgtgtccg gctcgatgcg ctcgagcagc tgccgcaacg gcgcgatcaa
     1741 ccagctgtag agacgttgtg cgtgcgggag gtaggcggag ccgctgtcgc tgcgctcgat
     1801 cgcgtcgcgc agcaggcgta ccgttctggt caggtcggcg tcggagaccg gaaccgtgat
     1861 ctgggtgacg tcgtcgccgc tgctcacgag gagctcgagg cgatccgcga acgacatcgg
     1921 atagatcacg acggcgcgat cgatgctcgg cgggcgatcg aacacgaccg ggaccgagca
     1981 ctggttctcg aagtaattgc ggatctcggc gatcctgagt tgctcgaggt tgcgttgcag
     2041 tgcgcgcagc gcggcggttg catcggagcc ggagctgccg cgcgttgcgg ccagcatcac
     2101 gtccgcgtac tcctcgtaca acggcagcac gttgcgccga aagccgcggc gtgacgtggc
     2161 tgcggcgacc gtggtgccct cgagcgtcgc gacggccgcc gaatatgcga gcagcgcgtc
     2221 gtcggccctg ccggcgtcgc gcagcacgcg gccgagttgc cactcgaagc gatactgaag
     2281 ctcgtccaaa tccgcgttct gcgctgccag agcggcgagc cgggtttcct gcagggcttg
     2341 ctcgggattc cccgcgatca tgtgctccgc gccgagctcc gcgcgtgccg cggcgatcag
     2401 cgcggcgtcg cctgagtctg tcgcgattct cagcgcttcg gtcgcgagct cgagcgagga
//
LOCUS       DATCUD010000009         2991 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42674, whole genome shotgun sequence.
ACCESSION   DATCUD010000009 DATCUD010000000
VERSION     DATCUD010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2991
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42674"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..341)
                     /locus_tag="VIQ99_00155"
     CDS             complement(<1..341)
                     /locus_tag="VIQ99_00155"
                     /inference="COORDINATES: protein motif:HMM:NF013062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic-ring-hydroxylating dioxygenase subunit
                     beta"
                     /protein_id="HEY9181577.1"
                     /translation="MAESGPSKERLVYLDLMREIEDFFFLEADLLDEREYDQWLDLLT
                     EDIVYWMPLRKNVSYANRHKDITAENDLAWFHDDKDTLRKRVKQIQTGIHWADEPISR
                     ISHLITNVRLA"
     gene            complement(352..1680)
                     /locus_tag="VIQ99_00160"
     CDS             complement(352..1680)
                     /locus_tag="VIQ99_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014211481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY9181578.1"
                     /translation="MKRASRAARDLVDTANGEISREIFVSDSIYQEEKERIFARAWLY
                     IGHESQIRNPGDYFVSKMGEESVILARDVDGKVHVFLNSCAHRGMRVCRYDEGNTRAF
                     KCPYHAWTYKTDGTLIGVQDYENAYQPPFDKSKWGLTEVAQLANYMGTIWATWDKNAP
                     PFADYLGEAKFAFDNGLCAWDGSDAETELLGSVQKWKVPCNWKFIAENFSGDWLHGVS
                     HRSVDMVRLGPSGEVGRRDDFGQLVVTAYPEGHGVLYSVYPNRETRTEYAMSPVTSEY
                     YQKCWERRLKNKGALAGTSPLVGTIFPNMSFHGQQPRTLLVSHPTGANETEMWRTYFV
                     DKAAPEEVKQFLREYYMRYSGPAGMTEQDDMENWNYAHEASGGTISRRRPYHYKAGLG
                     AGGRHGVIPGVVTEKPITSEQNPRAFYKRWAEYMDFDTWGELLDAKNGRA"
     gene            complement(1706..2500)
                     /locus_tag="VIQ99_00165"
     CDS             complement(1706..2500)
                     /locus_tag="VIQ99_00165"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9181579.1"
                     /translation="MKVGFIGLGMQGKYMAINLAQAGYDLMVYDTRAEPLEELAAAGA
                     RVAKSNAEVGAHAEIVQVCVLNDAQVEAVVAGARGLLETAKPGTIIVIHSTVEPATIE
                     RLAPLAAAKRVEIMDVPVSGSERGAKAKTMSYMAGGSAEALEKCRPLFLTSGPKIQHV
                     GKLGSGVRAKLAHQIIISINMMAAYEGMKVGVESGLDPEILEKVIHDGLAQSWIADEW
                     SKLSFGPHSRLVFYKDLHLGLKLAHDLGISVPGAGLAQQMLDKIVP"
     gene            2815..>2991
                     /locus_tag="VIQ99_00170"
     CDS             2815..>2991
                     /locus_tag="VIQ99_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004971908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9181580.1"
                     /translation="MEFRHLRYFVAVAEELSFTRAAARLRTAQPSLSQQIRQLEKSIG
                     AKLLDRSRQHVALTN"
BASE COUNT          540 a          970 c          858 g          623 t
ORIGIN      
        1 tccgccagac gaacgttcgt gatcaggtgc gagatccgcg agatcggctc atcggcccaa
       61 tgaatgcccg tctgaatctg cttgacgcgt tttcgcaggg tgtccttgtc gtcgtgaaac
      121 cacgcgaggt cgttctcggc agtgatgtcc ttgtgtcggt tcgcgtagga cacgttcttg
      181 cgcagcggca tccagtagac gatgtcttcc gtcagcagat cgagccactg gtcgtactct
      241 cgctcgtcga gtaggtccgc ctccagaaaa aagaagtcct cgatctcccg catcagatcg
      301 agatagacaa gacgttcctt gctcgggccg gattccgcca tgaccgcgcg ctcaagccct
      361 accgtttttg gcgtcgagca actcgcccca ggtgtcgaaa tccatgtatt cggcccagcg
      421 cttgtagaag gcccgcgggt tttgctcgct cgtgatcggc ttctcggtga cgactccggg
      481 aatcacgcca tggcgcccgc ccgcgccgag gcccgccttg tagtgatacg ggcggcggcg
      541 cgaaatggtt ccgccgcttg cctcatgagc gtagttccaa ttctccatgt cgtcttgctc
      601 ggtcattccg gctgggccgg agtagcgcat gtagtactcg cgcagaaact gcttcacttc
      661 ctcgggagcc gccttgtcga cgaaatacgt gcgccacatt tcggtttcgt tggcacccgt
      721 cggatgggac acgagcagcg tgcgcggctg ctggccgtga aacgacatgt tcggaaaaat
      781 cgtgccgacg agcggagaag ttccggccaa cgcgcctttg ttcttcaagc gccgttccca
      841 gcacttctgg tagtactcgg acgtgaccgg cgacatcgcg tactcggttc gcgtctctct
      901 gttcggatag acgctgtaca gaacgccgtg cccctcggga taggccgtca cgaccaattg
      961 cccgaagtcg tctctgcggc cgacctcgcc gctcggaccc aaacgcacca tgtcgacgga
     1021 tcggtggctg acgccgtgca gccaatcacc ggaaaaattc tcggcgatga acttccagtt
     1081 gcaaggcacc ttccacttct gcacgctgcc gagcagctcg gtctcggcgt cgctgccgtc
     1141 ccacgcgcac aaaccgttgt cgaacgcgaa cttggcctcg ccgaggtaat ccgcgaacgg
     1201 cggtgcattc ttgtcccacg tcgcccagat cgtgcccatg tagttggcga gctgcgccac
     1261 ctcggtcaat ccccatttgg atttgtcgaa cggcggctga tacgcgttct cgtagtcctg
     1321 cacgccgatc agcgtgccat ccgtcttgta cgtccatgca tggtaagggc acttgaacgc
     1381 tcgcgtgttg ccttcgtcgt aacgacagac gcgcatgccc cgatgcgcgc agctgttcaa
     1441 gaacacgtgc accttaccgt cgacgtctcg tgcaaggatc acggactcct cgcccatctt
     1501 cgagacgaag tagtcgcccg ggtttctgat ctggctctcg tgcccgatgt acaaccacgc
     1561 ccgcgcaaaa atccgttcct tctcctcctg atagatcgag tcgctcacga atatctcgcg
     1621 gctgatttcg ccgttggccg tatcgaccag atcgcgtgcg gctcgactcg ctcgtttcat
     1681 ggctcttacc cgttcgagga cttgctcagg ggacgatctt gtccagcatc tgctgggcca
     1741 ggccggcgcc cggcaccgag atgccgagat cgtgggccag cttcaggccc aggtgcagat
     1801 ctttgtagaa gacgagacgt gaatgcggcc cgaacgagag cttggaccat tcgtcggcga
     1861 tccagctctg cgccaacccg tcgtgaatga ccttttccag gatctcgggg tcgagacccg
     1921 attcgacgcc gaccttcatc ccttcgtaag cggccatcat gttgatcgag atgatgatct
     1981 ggtgcgcgag cttggcgcga acgccgctgc cgagcttgcc gacgtgctgg atcttcggcc
     2041 ccgacgtcaa aaacagcggt cgacatttct cgagcgcctc agccgagccg ccggccatgt
     2101 aggacatcgt cttggctttc gccccgcgct cgctgccgct gacgggcacg tccatgatct
     2161 cgacacgctt cgcggccgcg agcggcgcga ggcgctcgat cgtcgcaggc tcgacggtgc
     2221 tgtgaatcac gatgatcgtg cccggcttcg ccgtctcgag caggcctcgc gcgcccgcaa
     2281 cgacggcttc cacctgggcg tcattcaaga cgcagacttg gacgatctcc gcgtgcgcgc
     2341 cgacttcggc gttcgacttg gcgaccctgg cgccagcggc cgccaattcc tcgaggggct
     2401 ccgcgcgagt gtcgtacacc atcagatcgt agcccgcttg cgcgagattg atggccatgt
     2461 acttgccttg catgccaagc ccgatgaagc caactttcat ttgtgagccc ttgatcccaa
     2521 gtccactctt ctctgccggc cggtccagga aagcttggac actttagaag ccggccgcga
     2581 ccgtagaaca tggaggaagc tgcctgacac ttggactttt ccgcaattcg gccgctggag
     2641 cacctgatga gtacactgtc gtgaatgctt cggcaagccc cagaggagca agcatgaacc
     2701 tacacagcct gatcgtggca atggccggcc tcgcgagcgg agcggccgcc gcacacgacg
     2761 cgtgcgcccc gctcgctcga atcgagatcg aagagacact ccgaacagca ccccgtggaa
     2821 tttaggcacc tccgctattt cgttgcggtc gccgaagagc tcagcttcac acgtgcagcg
     2881 gcacgcttgc gcacggctca gccttcgctg agccagcaga ttcgtcagct cgaaaaatcc
     2941 atcggtgcga aattactcga tcgcagtcgg caacacgtcg ccttgaccaa t
//
LOCUS       DATCUD010000010         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56893, whole genome shotgun sequence.
ACCESSION   DATCUD010000010 DATCUD010000000
VERSION     DATCUD010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56893"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..977)
                     /gene="gshA"
                     /locus_tag="VIQ99_00175"
     CDS             complement(<1..977)
                     /gene="gshA"
                     /locus_tag="VIQ99_00175"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF016174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEY9181581.1"
                     /translation="MTRLDWLRDGGRAALIRNGLRGVEKETLRVGPDGRLSHRPHPKS
                     WGAALTHPYITTDYSEALPELVTPPQRTHWETLQFLCDVHAFIARRLDGELLWPASMP
                     CELPPDHEIPIAYYGPSNVGRMKTVYRNGLGHRYGRAMQAIAGVHFNYSLPAAFWAEY
                     AAHERNAEPLRDFRSAEMMGLVRNYRRCAWLVTYLFGGSPALCRSFRPDGHELLTELD
                     PTTWYAPFATSLRMSDLGYQNKTQARLSIRANSLAEYVAGMRGAVTTEEPSYAAIGVV
                     VGGDYRQLNANVLQIENEYYSTIRPKPSKASKRRPLAALAHDGIEYVEVR"
     gene            1148..1486
                     /locus_tag="VIQ99_00180"
     CDS             1148..1486
                     /locus_tag="VIQ99_00180"
                     /inference="COORDINATES: protein motif:HMM:NF022459.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2845 domain-containing protein"
                     /protein_id="HEY9181582.1"
                     /translation="MTIRSKTFCALLAAATLSLITAPAHAFRCGQRIITRGDHADKIL
                     RFCGEPVSVQTRYLERGYVDEYGRRFRGFTEELIVEEWTLNFGPRQLMRVVRLENGFV
                     ADVKVLGYGY"
     gene            complement(1483..1764)
                     /locus_tag="VIQ99_00185"
     CDS             complement(1483..1764)
                     /locus_tag="VIQ99_00185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181583.1"
                     /translation="MDGSFEIIALVLGDGNERRWHAGQLCRGAHRLVRRPDGRVALEP
                     VESEEEFERAARESGCFRRGKPIHDPHTHEVIGYEMEQVPLLRTAQAAG"
     gene            1991..2383
                     /locus_tag="VIQ99_00190"
     CDS             1991..2383
                     /locus_tag="VIQ99_00190"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY9181584.1"
                     /translation="MLNFRRRFQDTGTHATTYLAASGKFVGSITGQGAYVFCGTVEGD
                     CDINGPLTLAEGGRFKGTMKAVDIVVAGTVEGDVIAKQRVEIAGTARINGSLSGNSIA
                     VAEGAIIEGAITVTSGEAPIKFQEKRQA"
     gene            complement(2391..>3135)
                     /locus_tag="VIQ99_00195"
     CDS             complement(2391..>3135)
                     /locus_tag="VIQ99_00195"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9181585.1"
                     /translation="AAASYVVSTAAAAYDAGYDVFRLNFRDHGETFALNRELFHSCRI
                     DEVVGALKGITANHPARRTFLVGHSLGGNFALRVAARAPAAGIELTKVVAICPVLRPH
                     STMRALEDGLWVYRTYFLRRWRRSLLAKARCFPDLYDFGDLHRFPTLTATTEFFATRY
                     AGFPDLDSYLAGYAITGQALAQLTVPTRLIAAADDPVIPIADLKDLAVTPALGIEVLA
                     RGGHCAFLEDYRLKSWLDRAVLAQIEAGI"
BASE COUNT          595 a         1010 c         1010 g          520 t
ORIGIN      
        1 cggacctcga cgtactcgat tccgtcgtgc gcgagcgccg caagcggacg acgcttgctc
       61 gccttgctcg gcttcggccg tatcgtgctg tagtactcgt tctcgatttg cagaacgttg
      121 gcgttcagct gccgatagtc gccaccgacc acgacaccga tcgcggcgta gctcggttcc
      181 tcggtggtga ccgcgccgcg catgccggcc acgtactcgg caagcgagtt cgcgcgaatg
      241 ctcaaacgtg cctgggtctt gttctgataa cccaagtcgc tcatccgcaa cgacgtcgca
      301 aacggcgcat accaggtcgt gggatcgagc tcggtcagga gctcgtgccc atcgggccga
      361 aacgaacgac acagcgccgg cgagccgccg aacaggtagg tcacgagcca cgcgcagcgg
      421 cgatagttgc ggaccaagcc catcatctct gccgaacgaa aatcccgcag cggctccgcg
      481 ttgcgctcgt gagcggcgta ttcggcccag aacgcggctg ggagcgagta attgaaatgg
      541 acgccggcga tcgcctgcat ggctcggccg tagcggtgtc ccaaaccgtt gcggtatacc
      601 gtcttcatgc gcccgacgtt cgacggcccg tagtacgcga tcggtatctc gtggtccggc
      661 ggcagctcgc agggcatgct ggcgggccac aacagctcgc cgtcgagtcg ccgcgcgatg
      721 aacgcatgga cgtcgcagag aaattgcagc gtctcccaat gcgtgcgctg cggcggcgtc
      781 acgagctcgg gcaatgcctc ggaatagtcc gtcgttatgt acggatgcgt gagcgcagcg
      841 ccccagctct taggatgcgg ccggtgcgag agccggccgt cgggcccgac gcgcagcgtc
      901 tctttttcga cgccgcgcaa gccgttgcgg atcagcgcgg cccggccccc atcacgcaac
      961 cagtctaggc gcgtcacgaa cggcccgccg gttgctggat gcgaggatga cgggctcaag
     1021 gtcgacacgc tcgggggaat tgacgaaact ggtccgcatt ataggccggg tcgcaagtat
     1081 cgagccggtt cagcgtgggt tcagagagcc tttgcaaggc tcacggcgcg actgaaagga
     1141 ggccgtcatg acgatcagga gcaagacgtt ctgcgcgctg ctcgcagcgg ccacgctgtc
     1201 cctgatcacg gcgcccgcgc acgcgttccg ctgcggccaa cggatcatca cgcgcggcga
     1261 tcacgccgac aagatcttga ggttctgcgg cgaaccggtg tcggtccaga cgcgctactt
     1321 ggagcgcggt tacgtcgacg agtatggccg ccgattccgc gggttcaccg aagagttgat
     1381 cgtcgaagag tggacgctca atttcgggcc gcgacaactc atgcgtgtcg ttcgactcga
     1441 gaacggtttc gtcgccgacg tcaaagtcct gggctacgga tactagccgg ccgcctgcgc
     1501 ggtccgcagc aacggcactt gttccatttc gtatccgatc acctcgtgcg tgtgcggatc
     1561 gtgaatcggc ttaccgcgac ggaagcagcc cgactcgcga gcggcgcgtt cgaactcttc
     1621 ctccgactcg acgggctcga gtgcgacgcg cccgtcgggc cgccgtacca agcgatgagc
     1681 gccgcggcag agctgaccgg cgtgccaacg ccgctcgttg ccgtcgccaa gtaccaacgc
     1741 gatgatctcg aagctgccgt ccatggtgct gccctttcaa acgggtcgta cggagcctag
     1801 ctaagcaatc cgcgtgccat cggaaaaacg gaccgtataa acaatgggtt acgaaaaacc
     1861 ggcgtgatgg ccgtcacggt cgccaggcga caaaatttgc cacttaacgg cgaattatcg
     1921 ccacgtgacg tggttccagt gagaacgggt tcgcttcggg taccgtggct tctcctaagc
     1981 ggagatagcg atgctgaact tcagacgccg attccaggac acgggcaccc acgcgacgac
     2041 ctacctcgcc gcttcgggga aattcgtcgg ctcgatcacg ggccaaggag cctacgtgtt
     2101 ctgtggaacc gtcgaaggcg attgcgacat caacggcccg ttgacgctgg ccgagggcgg
     2161 ccgcttcaag ggcacgatga aagccgtcga tatcgtcgtc gccggcaccg tcgagggcga
     2221 cgtgatcgcg aagcagcgcg tcgagatcgc cggcacggcg cgcatcaacg gcagcctctc
     2281 tggcaactcg atcgccgtag ccgagggcgc catcatcgag ggagccatca ccgtcacgag
     2341 cggcgaggct ccgatcaagt tccaagagaa gcggcaggcc taacgacgcc tcaaatcccc
     2401 gcctcgatct gcgcgagcac ggcacggtcg agccagctct tgaggcgata gtcctcgagg
     2461 aacgcgcagt gcccaccgcg cgccagcacc tcgataccga gcgccggtgt gaccgcgagg
     2521 tccttcaagt ccgcgatcgg aatcaccggg tcgtcggctg cggcgatcag ccgcgtcggc
     2581 accgtaagct gcgcgagcgc ttgccccgtg atcgcgtagc cggcgagata agaatccaaa
     2641 tcggggaacc ccgcgtaccg cgttgcgaag aactccgtag tcgccgtcaa agtcgggaag
     2701 cggtgcaggt cgccgaaatc gtagagatcg ggaaagcacc gagccttcgc gagcaggctg
     2761 cggcgccaac gccgcaggaa atacgtgcgg tagacccata ggccgtcctc gagcgcgcgc
     2821 atcgtgctat ggggtcgcaa cacggggcag atcgcgacga ccttcgtaag ctcgatgccc
     2881 gcggccggcg cgcgtgccgc gacgcgcaac gcaaaatttc cccccagcga atgtccgacg
     2941 aggaacgtgc gtcgcgccgg atgatttgcg gtgatcccct tcagcgcgcc gacgacctcg
     3001 tcgatccggc acgaatggaa cagctcgcga ttcagcgcaa acgtctcgcc gtggtcgcgg
     3061 aagttcagcc ggaatacgtc gtagccagcg tcgtaagccg cggccgcggt ggacactaca
     3121 taactcgcgg ccgcg
//
LOCUS       DATCUD010000011         4664 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_64036, whole genome shotgun sequence.
ACCESSION   DATCUD010000011 DATCUD010000000
VERSION     DATCUD010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4664
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64036"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..212
                     /locus_tag="VIQ99_00200"
     CDS             <1..212
                     /locus_tag="VIQ99_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020736483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HEY9181586.1"
                     /translation="RRKKMPIYAREGVRNAWLVDPLVQALEVFRLESRRWSRVAAHEG
                     GAKVRAEPFAAIELELGTLWLQEQL"
     gene            complement(209..1681)
                     /gene="xseA"
                     /locus_tag="VIQ99_00205"
                     /pseudo
     CDS             complement(209..1681)
                     /gene="xseA"
                     /locus_tag="VIQ99_00205"
                     /inference="COORDINATES: protein motif:HMM:NF014640.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
     gene            1671..3146
                     /gene="guaB"
                     /locus_tag="VIQ99_00210"
     CDS             1671..3146
                     /gene="guaB"
                     /locus_tag="VIQ99_00210"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEY9181587.1"
                     /translation="MRIIHEALTFDDVLLEPAYSEVLPREVQLKTQLTRSLTLNIPII
                     SAAMDTVTEARLAITLAQEGGIGIIHKNMSPKDQARQVQQVKKFESGVIHDPITVTPD
                     TTIRDVIALTRAKNISGVPVVEGENLVGIVTHRDLRFETQRDAPVSAVMTPKERLVTV
                     PEGAEKEKVLGLLHKHRIEKVLVVDKGEGFKLRGMITVKDIQKAHDYPYACKDARGAL
                     RVGAAVGTGIDTDERVELLVDAGVDVIIVDTAHGHSRGVLDRVRQIKRKYKDLQLIAG
                     NIVTAEAARALVDAGADGVKVGIGPGSICTTRIVAGVGIPQITAVTTVAEALKGTDVP
                     CISDGGIRYSGDIAKAIVAGAYSVMIGGLFAGTEESPGEVELYQGRSYKSYRGMGSIG
                     AMAQRHGSSDRYFQDSAEELEKLVPEGIEGRVPYKGSIVAIVQQLIGGVRAAMGYTGC
                     HNIGEMRTKPKFVRITGAGRRESHVHDVTITKEPPNYRSEV"
     gene            3151..4242
                     /gene="guaA"
                     /locus_tag="VIQ99_00215"
                     /pseudo
     CDS             3151..4242
                     /gene="guaA"
                     /locus_tag="VIQ99_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005369715.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
     gene            complement(4155..>4664)
                     /locus_tag="VIQ99_00220"
     CDS             complement(4155..>4664)
                     /locus_tag="VIQ99_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018874313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181588.1"
                     /translation="EPLRELFKDEVRRIGAELGLPPELIQRHPFPGPGLGVRILGEVK
                     KEYADLLRRADDIFTSELRTQGLYDTVSQAFAVFLPVKSVGVMGDGRRYDYVVALRAV
                     ETVDFMTARWARLPYDFLDHVSRRIMNEVRGVSRVTYDISGKPPTLWCDLIRCALPVF
                     APADSITSG"
BASE COUNT          787 a         1563 c         1593 g          721 t
ORIGIN      
        1 atcgccgcaa gaaaatgccg atctacgcac gcgaaggtgt gaggaatgcg tggctcgtgg
       61 atccgctggt gcaagcgctc gaagtgtttc gcctcgagtc gcggcgttgg tcgagggttg
      121 ccgcccacga aggtggcgca aaggtgcgag ccgagccctt cgccgcgatc gagctcgagc
      181 tcggtacgct ctggttgcaa gaacagctct aacccttctt cggcttgacc gcgccgacgg
      241 tagccgtgag gccgccgcgc gcgagccgca cgtcgatcga cgagccttct ttcactttct
      301 tggtatcgac gagcacgtga ccgcccgcat ccgtcacgat cgcgtagccg cgctcgagcg
      361 tggccaaagg gctcaacgat tgcagcgtgc gtgaggcgag cttcaggcgc tgctgcgtgt
      421 tctcgacttg ccgcagcaat gcacggcgca ggtccgccta cgccctgacc caacgctcgc
      481 gcgcccgcgc gaggtgttgc gcagggctcg catgcgcgac ggccgtcgcg agccgtgcaa
      541 ggcgcagctt tcgggtctcg atccggcgct cgacggcgcg cttgagccgc gcttcgagct
      601 cgtcgaggcg ctgcgcgcgt tcgcgcagat gcacgccggg gtggcagcgc gacaatcgat
      661 gcgagagtcc ggctactcgg cgttcgtcgg tcacgagctg ccgccgcagc acgtgggcga
      721 gccgctcgcc gacgacgtcg aaccgattcc gccactcgcg ttgatccggc accgcgagct
      781 cggcggcctg cgacggggtc ggggcccgca cgtcggccac gaagtccgcg atcgagaagt
      841 cggtctcgtg gccgacgccg acgatgatcg gcagctcgac ggcggccacc gcgcgcgcca
      901 ggatctcctc gttgaacgcc cagaggtcct cgagcgagcc gccgccgcgc gtcaagatca
      961 gcaggtcgca ctcggcgcgg cggtccgcca gctcgagcgt ccgcgcgatc tcttcggccg
     1021 cgccggcgcc ttggacctgg gtcgggtaga tcagcacggc ggtcgccggg aagcggcgcc
     1081 gcagcgcgat cagcacgtcg cggagcgcgg cgccggtcgg cgacgtgatc acgccgatcc
     1141 gccgcggcag cttcggcagc tcccgcttgc gcgcggcgtc gaacagcccc tcggccgcga
     1201 gccggcgctt cagctcctcg aagcggcgcc gcagcgcgcc ttcgccggct tcctccatgt
     1261 agtcgacgac gagctgaaac tcgccgcgcg cctcgtagac gctggcccgt gcgcggacca
     1321 gcaccttacg gccgttcgcg atctcgaacc ccaagccgcg ggtcgccatg cgaaacatcg
     1381 cgcagcggac ctgggcctcg gagtccttca gcgaccagta gagatggccc gacgagggcc
     1441 gcgacaggtt cgagatctcg ccctcgaccc acaccgtgcc gaggccggtc tctatgagcc
     1501 ggcgcgcgtc gcggttcaaa ctcgagaccg agagaatccg ccgctccgcg aatggcagct
     1561 ggagcgagtc gccaggttgc atggcgccag tataacggca gctcgtcgga tttgccggcc
     1621 ggcaggtcag gcagtaaact gcgcggctca aattccccgg gagctccgcc atgcggatca
     1681 ttcacgaggc gctcaccttc gatgacgtcc tcttagagcc cgcttattcc gaggttttgc
     1741 cgcgggaggt ccagctcaag acccagctca cgcgctcgct gacactgaac atccccatca
     1801 tctcggccgc gatggacacg gtcaccgaag cgcgcctcgc gatcacgctc gcgcaggaag
     1861 gcggcatcgg gatcatccac aagaacatgt cgccgaagga tcaggcgcga caggttcaac
     1921 aggtcaagaa attcgagagc ggcgtgatcc acgacccgat cacggtcacg ccggacacga
     1981 cgattcgcga cgtgatcgcg ctgacgcgcg cgaagaacat ctccggcgtg cccgtcgtcg
     2041 agggcgagaa cctggtcggc atcgtcacgc atcgggacct gcgcttcgag acgcagcgcg
     2101 atgcgccggt gtccgcggtc atgacgccga aggagcggct cgtgacggtg cccgagggcg
     2161 ccgagaagga gaaggtcctc gggctcctgc acaagcaccg catcgagaag gtgctcgtgg
     2221 tcgacaaggg cgagggcttc aagctccgcg gcatgatcac cgtgaaggac atccagaagg
     2281 cgcacgacta tccgtacgcg tgcaaggacg cgcgcggcgc gctgcgtgtc ggcgcggccg
     2341 tcggcacggg catcgacacc gacgagcgcg tcgagctgct cgtcgatgcg ggcgtcgacg
     2401 tgatcatcgt cgacacggcg cacggccact cgcgcggcgt gctggaccgc gtgcgccaga
     2461 tcaagcgcaa gtacaaggat ttgcagctga tcgccggcaa catcgtcacg gccgaggcgg
     2521 cgcgtgcgct cgtcgacgcg ggcgccgacg gcgtcaaggt cggcatcggc ccgggctcga
     2581 tctgtacgac gcggatcgtg gccggcgtcg gcatcccgca gatcacggcc gtcacaaccg
     2641 tcgccgaggc gctgaagggc acggacgtgc cgtgcatctc ggacggcggg attcgttact
     2701 ccggggacat cgcgaaagcc atcgtggccg gcgcgtactc ggtcatgatc ggcggtctct
     2761 ttgccggcac cgaggagtcg ccgggcgagg tcgagctgta tcaaggccgc tcgtacaagt
     2821 cgtatcgtgg catgggctcg atcggcgcga tggcgcagcg ccacggctcg tcggatcggt
     2881 acttccagga ttcggccgag gagctcgaga agctcgtgcc cgagggcatc gaaggccgtg
     2941 tgccgtacaa gggcagcatc gtcgcgatcg tccagcagct gatcggcggc gtgcgcgccg
     3001 cgatgggcta cacgggctgc cacaacatcg gcgagatgcg cacgaaaccg aagttcgtgc
     3061 ggatcacggg cgcaggacgc cgcgagagcc acgtccacga cgtgacgatc acgaaggaac
     3121 ccccgaacta ccgctccgag gtatgaacgc gtgaatgcag tcgccgcctc cgatgcctcc
     3181 cggcacgccg agcgcatcct cgtcgtcgac ttcggcggcc agtacacgca gctgatcgcg
     3241 cgccgcgtgc gcgaggtcgg tgtctacagc gagatcctgc cgttcgatgc ctcggccgac
     3301 gagatccgcg cgtttgcgcc gaccggaatc atcctctccg gcggccccga gtccgtcggc
     3361 gaagcgggct cgccgcagat cgcggactcg ctgatcgcgg ccggagtgcc ggtgctcggg
     3421 atctgctacg gcatgcaggc gctggccgcg aagctcggcg gcgcggtcgc gaccgcggag
     3481 catcgcgagt acggctacgc cgaggtccgg ctgaccggcg gtgacccgtt gtttcagggg
     3541 ctcggtcccg gcctcaaggt gtggatgagc cacggcgacc gtgtcgagaa actgcccaag
     3601 ggcttcactg cgatcggctc ctcggcgaac tcgccgctcg cggcgatggc gaacgtcgac
     3661 cgcaagatct acggactcca gttccatccc gaggtcacgc ataccgagca cggcctcgac
     3721 attatccgcc gcttcgtgct cgacatttgc ggctgcgcac cggtgtggac ggccaagaac
     3781 atcgttgccg agcatctcga caagattcgc gcgacggtcg gcaaggaacg cgtgttgctc
     3841 ggcttgtcgg gcggcgtgga ctccacggtc gtcgcggcgc tcgtgcacga ggccatcggc
     3901 gatcagctcg tctgcgtgtt cgtcgacacg ggcttgctgc ggctgaacga aggcgatcag
     3961 gtcatgagcg tcgtcaagaa gcacctcggc gcgaacgtga tccgcgtcga tgcggagagg
     4021 acctttctcg acgcgctggc cggcgtcgcg gatccggagc agaagcgcaa gatcatcggg
     4081 cgcttgttcg tcgaggtgtt cgataccgag gccgcgaaga ttcgcgacgt gcggtggctc
     4141 gcgcaaggca cgatttaccc cgacgtgatc gagtcggccg gtgcgaagac gggcaaggcg
     4201 catctaatca agtcgcacca caacgtcggc ggcttgccgg agatgtcgta cgtcacgcgc
     4261 gaaacgccgc gtacctcgtt catgatccgg cgcgatacgt ggtcgaggaa atcgtacggc
     4321 aaccgcgccc agcgcgccgt catgaagtcg acggtctcga cggctcgcag cgcgacgaca
     4381 tagtcgtagc ggcggccatc gcccatcacg ccgacggact tcacgggcaa gaagaccgcg
     4441 aatgcctggc tcacggtgtc gtacagccct tgcgtgcgca gctcggaggt gaagatgtcg
     4501 tcggcgcggc gcaagagatc tgcgtattcc ttcttgacct cgccgagaat tcgcacgccc
     4561 aatcccgggc ccgggaacgg atggcgctgg atcagctccg gcggcagccc gagctcggcg
     4621 ccgatccggc gcacctcgtc cttgaacagc tcccgcagcg gctc
//
LOCUS       DATCUD010000012         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7221, whole genome shotgun sequence.
ACCESSION   DATCUD010000012 DATCUD010000000
VERSION     DATCUD010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7221"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VIQ99_00225"
     CDS             complement(<1..323)
                     /locus_tag="VIQ99_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013674395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HEY9181589.1"
                     /translation="MPHLRFPTAAVLATLLVSAAPLAAQPTVERFTIDVPEPVLRDLD
                     ERLARTRWPDQLPGTDWSYGADTAYLRELVDYWQRDYDWRAEERRLNRFEHYRASIDG
                     TRIHFV"
     gene            complement(369..626)
                     /locus_tag="VIQ99_00230"
     CDS             complement(369..626)
                     /locus_tag="VIQ99_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181590.1"
                     /translation="MNDRPRFWFPAKRYGWGWGLPVCWQGWLVFAAYAALLYGGIYYF
                     EAQRNAFALLIYLLALTAVLIAIVAVKGEKPLRWRWGGDGR"
     gene            complement(694..1158)
                     /locus_tag="VIQ99_00235"
     CDS             complement(694..1158)
                     /locus_tag="VIQ99_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018061210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEY9181591.1"
                     /translation="MSNRKSRRVALDLRGLSGREELWRFSATEKRDRAVESWLAGDPV
                     DLRAIAQKWFARIRRCGADVRELIHDGCPVACVDGVPFAYVNTFKSHANVGFFQGAAL
                     DDPTHLLAGNGKRMRHVKLVPGGELDDAALSALIDAAYADIKKRIAADRESR"
     gene            complement(1315..2037)
                     /locus_tag="VIQ99_00240"
     CDS             complement(1315..2037)
                     /locus_tag="VIQ99_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008034831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY9181592.1"
                     /translation="MAGNHIRIGLIGDYDATVPAHQAIPIALRLSGEAVGDDVGFDWV
                     PTPEIVNASRVASFDGLWCVPASPYQNGEGALLAIRFAREHARPFLGTCGGFQHAILE
                     YARNVLGWADADHAETAPDAGRAVIALLACALVDATDSVELVPGTRTAAAYGCPRATE
                     GYRCRYGLNPRFQAALVCGPLRASAHDGAGEVRAVELEDHPFFVGTLFQPERAALKGE
                     LPPLVSAFVRASVTQARRKLPS"
BASE COUNT          370 a          733 c          686 g          326 t
ORIGIN      
        1 acgaaatgga tgcgcgtgcc gtcgatcgac gcgcggtagt gctcgaagcg attcagccgg
       61 cgctcctcgg cacgccagtc gtaatccctc tgccagtagt ccacgagctc gcgcagatac
      121 gcggtgtcgg cgccgtagct ccagtccgtg cccggaagct gatcgggcca gcgcgtgcgc
      181 gcgaggcgct cgtcgagatc gcgcagcacg ggctcgggca cgtcgatcgt gaagcgttcg
      241 acggtcggtt gcgcggccaa tggcgctgcg ctcacgagca acgtggccag cacggccgcg
      301 gtcggaaatc ggagatgggg catggcgtca tcccggagtt gttgcagtcg ctctcgccgc
      361 aacggagttt agcgtccgtc tccgccccac cgccaacgca gcggcttctc gcctttgacg
      421 gcgacgatcg cgatgagcac ggccgtcagg gcgagcaggt agatcagcaa cgcgaaggcg
      481 ttgcgttggg cctcgaagta gtagatcccg ccatagagca gcgccgcata ggccgcgaac
      541 acgagccagc cttgccagca cactggtaag ccccagcccc acccgtaccg tttggcgggg
      601 aaccagaacc tcggtcgatc gttcatcgcg cacccccgga gagatcctag ctcaccgcgg
      661 cggcgggctc atctcaagac gccaacgcgc tgatcagcgc gactcgcgat cggcagcgat
      721 ccgtttcttg atgtccgcgt acgcggcgtc gatcagcgcg ctcagcgctg cgtcgtccaa
      781 ctcgccaccg ggaacgagct tcacgtgccg catacgcttg ccgttgcccg cgagcagatg
      841 cgtgggatcg tcgagcgccg caccttggaa gaagcccacg ttggcgtggc tcttgaacgt
      901 gttcacgtac gcgaatggca ccccgtccac gcacgcgacg ggacagccgt cgtgaatcag
      961 ctcccggacg tccgcgccac atcgacggat ccgtgcgaac cacttctgcg cgatcgctcg
     1021 cagatcgacc gggtcgccgg ctaaccagct ttcgactgcg cggtcgcgtt tctcggtcgc
     1081 ggagaaacgc cacagctctt cgcggccgct caacccgcgg aggtccaacg cgacgcgacg
     1141 agatttgcgg ttgctcatgg cctcagggaa cggtgattct cagcagcgcg taatgcagat
     1201 cgacgatctg cgcgacgctg cccgcgacga caccgaaccc caacgcgatc ccgatcgatg
     1261 cgaagcgagg tactggcata ggacgctcca agtgttcagg ctttacggcc taggtcacga
     1321 ggggagttta cgccgggcct gcgtgacgct ggcacgcacg aacgccgaca ccagcggtgg
     1381 gagctcgcct ttcagggcgg cgcgctccgg ctggaacagc gtgccgacga aaaacggatg
     1441 atcctcgagc tcgaccgcgc gtacctcgcc ggcgccgtcg tgcgcgctcg cacgcaatgg
     1501 gccgcacacg agcgccgcct ggaaccgcgg gttcaagccg tagcggcagc gataaccctc
     1561 ggtggcccgc gggcaaccgt aggcggccgc ggtccgcgtc cccgggacca actccacgga
     1621 atcggtcgca tccacgagcg cgcacgcgag caaagcaatc acggcgcggc ctgcgtcagg
     1681 cgccgtctcg gcgtggtccg cgtccgccca ccccagcacg ttgcgcgcgt actcgaggat
     1741 cgcgtgctgg aatcctccgc acgtgcccag gaacggacgc gcatgctcgc gcgcgaagcg
     1801 aatcgcgagc aacgcgcctt ccccgttttg gtacgggctc gcgggaacgc accacaggcc
     1861 gtcgaagctc gcgacgcgcg atgcattcac gatctccggc gtcggcaccc agtcgaatcc
     1921 aacgtcgtca ccgacggcct ccccggagag tcgaagcgcg atcgggatcg cctgatgcgc
     1981 ggggaccgtc gcatcgtagt cgccgatcag tccgatccga atgtggttac ctgccactgc
     2041 gccctcactc gatggccttc agcgcgtgct cgacgaatcg gctggccgga gcgtcgcggc
     2101 acgctgcgat cacga
//
LOCUS       DATCUD010000013         4406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_64037, whole genome shotgun sequence.
ACCESSION   DATCUD010000013 DATCUD010000000
VERSION     DATCUD010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64037"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VIQ99_00245"
     CDS             complement(<1..801)
                     /locus_tag="VIQ99_00245"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEY9181593.1"
                     /translation="MNPVHWPARILLGALVALAAGAALAQDDPPLPPEEVFVYTTRAD
                     GERIYLDFDVLDGHYLYRKRFGFDTATSGVALGAAVFPRGETHTDEFFGEQEIYRHEF
                     SIAIPYRRTSAAANLDLTIELQGCADRGFCYLPQEWSTSVALPKPSLLDLGAGADQTA
                     TGDDQLPVDLAFAMNARFDKPNELTVAWQIAPGYYLYRDKLTLAVDGRIDLGAPVLPE
                     GVAHRDDNFGDVEVYYDFVEIKVPFARASPDALDLTLTAGFQGCKEASI"
     gene            complement(809..1141)
                     /gene="cutA"
                     /locus_tag="VIQ99_00250"
     CDS             complement(809..1141)
                     /gene="cutA"
                     /locus_tag="VIQ99_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016352533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEY9181594.1"
                     /translation="MSAQTMVVLTTCGSSDDAASLAQLLVERRLAACVNVIADVASTY
                     RWQGRVQQDRETLLIVKTMSTRLTEVTAAIVAESKYELPEVIALPVEAGFAPYLKWLG
                     ESVGELKD"
     gene            1345..1635
                     /gene="groES"
                     /locus_tag="VIQ99_00255"
     CDS             1345..1635
                     /gene="groES"
                     /locus_tag="VIQ99_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY9181595.1"
                     /translation="MKLRPLHDRVVIRRTEEERKSPGGIVIPDTATEKPIKGEVVAVG
                     KGKILENGEVRPLDLKKGDKVLFGKYSGTEVKVDGEDLLVMREDDVMAVIEK"
     gene            1679..3316
                     /gene="groL"
                     /locus_tag="VIQ99_00260"
     CDS             1679..3316
                     /gene="groL"
                     /locus_tag="VIQ99_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365183.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY9181596.1"
                     /translation="MATPKEVRFSDDARQRMLKGVNVLANAVKVTLGPKGRNVVLEKS
                     FGAPTVTKDGVSVAKEIELEDKFENMGVQMVKEVASQTSDAAGDGTTTATVLAQAIFR
                     EGLKSVAAGFNPMDLKRGIDKATSAIIDELKKLSQPCKDDKSIAQVGTISANADEEIG
                     KIIAEAMSKVGKEGVITVEEGSGLANELDVVEGMQFDRGYLSLYFINDQATQSANLEN
                     PLILIHDKKISNIRELLPLLEAVAKAGRPLLIIAEDIEGEALATLVVNNIRGIVKVAA
                     VKAPGFGDRRKAMLQDIAILTGGQVISEEVGLSLEKASMNDLGEAKKVQVSKENTTII
                     DGAGKKSDIKGRIDQINKEIEESTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKE
                     KKARVEDALHATRAAVEEGVVPGGGVALLRALKGISTLQGANEDQTVGVNILRKAVEE
                     PLRQIVGNAGTDASVVLNAVVNGKGNYGFNAANGEYGDMVKFGIIDPTKVTRLALQNA
                     ASVAGLLLTTEAMIAEAPKQEKEAAGAPHGHGMDGMM"
     gene            complement(3376..3858)
                     /locus_tag="VIQ99_00265"
     CDS             complement(3376..3858)
                     /locus_tag="VIQ99_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 domain-containing protein"
                     /protein_id="HEY9181597.1"
                     /translation="MTLYYLLLQYVHIVGATVLLGTGAGIAFFMLKAHSTGDAAIIAG
                     VARIVVTADFVFTASAVAVQPVTGFLLARFLGYPIFDGWIALSLVLYVVTGAFWVPVV
                     LMQIRMRDLAAAAARAGSPLPRLYHRLFWRWLAFGFPAFAAVLGILWLMTARPTFSFF
                     "
     gene            complement(3937..>4406)
                     /locus_tag="VIQ99_00270"
     CDS             complement(3937..>4406)
                     /locus_tag="VIQ99_00270"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9181598.1"
                     /translation="EIGTFTGYSALAVALALPADGKLITCDVNAEWAAIGQRFWRKAG
                     VDSRIDLRIKPALETLDALLAEGQAGQFDFAFIDADKPSYSAYYERLLKLVRRGGLIA
                     VDNTLALAGKPVFAQDSVNAKAMHDFNERMHRDERVDLAMLTVGEGLTLLRVR"
BASE COUNT          911 a         1351 c         1430 g          714 t
ORIGIN      
        1 gatgctcgct tctttgcagc cctggaagcc ggccgtcagc gtgaggtcga gcgcgtcggg
       61 gctcgcgcgc gcgaacggca ccttgatctc cacgaagtcg tagtacacct cgacgtcgcc
      121 gaaattgtcg tcgcggtgcg cgacgccctc gggcaagacc ggtgcgccga gatcgatgcg
      181 cccgtcgact gccagcgtga gcttgtcgcg gtagaggtaa tagcccggcg cgatctgcca
      241 tgcgaccgtg agctcgttcg gcttgtcgaa gcgcgcgttc atcgcgaacg cgagatcgac
      301 cggcagctga tcgtcgccgg ttgcggtctg atcggcgccg gccccgagat cgagcagcga
      361 cggcttcggc aacgctaccg atgtcgacca ctcttgcggc aggtaacaga agccgcggtc
      421 cgcgcagcct tgcagttcga tcgtaaggtc gaggttggcg gccgcgctcg tccgccgata
      481 cggaatcgcg atcgaaaact cgtggcgata gatttcttgc tcgccgaaga actcgtcggt
      541 gtgtgtctcg ccgcgcggga acacggctgc gccgagcgca actccgctcg tggccgtgtc
      601 gaagccgaag cgcttgcgat acaagtagtg gccgtcgagg acgtcgaagt cgagataaat
      661 gcgctcgccg tccgcacgcg tcgtatagac gaacacctct tccggcggca gcggcgggtc
      721 gtcttgcgcg agcgccgcgc ccgctgccag agcgacgaga gcgccgagga gaatgcgtgc
      781 aggccagtgg accggattca taagcgcttt agtccttcaa ctcgcccacg gattccccga
      841 gccacttgag atacggcgca aagcccgctt ccacggggag tgcaatgacc tccggcagct
      901 cgtacttcga ctccgccacg atcgcggccg taacctcggt caatcgtgtg ctcatggtct
      961 tgacgatcaa cagcgtctcc cgatcctgtt gcacgcggcc ctgccatcga tacgtcgaag
     1021 caacgtcggc gatcacgttc acgcaggccg caagccggcg ctcgaccaag agctgcgcca
     1081 agctcgccgc gtcgtcggag ctgccgcacg tcgtcagcac gaccatcgtt tgcgcgctca
     1141 tgcggctcac tcgcccggca gtcttagacg gtccaaagca taccggccgg ttgcgaatcg
     1201 tgtcatgact cggctctcac ggtcttgcaa ttggcctttc gatccatatg attagcactc
     1261 actttgaccg agtgctaata gagctgagcc cggtcaggat aatctagtca gaaatcaagt
     1321 gcttaactta agggagagca ttccatgaaa cttcgtcctc tgcatgatcg cgtcgtgatt
     1381 cggcgcacgg aagaagagcg caagtccccg ggcggcatcg tgatcccgga cacggcgacc
     1441 gaaaagccga tcaagggtga ggtcgtcgcg gtcggcaagg gcaagatcct cgaaaacggc
     1501 gaagttcgcc ccttggacct caagaagggc gacaaggtgc tgttcggcaa atactcgggc
     1561 accgaggtca aggtcgacgg cgaagacctg ctcgtgatgc gcgaagacga cgtgatggcc
     1621 gtcatcgaga agtaacccga ttccgtaagc tttcaatcaa ttccaggaga aaagagtcat
     1681 ggcgactccg aaagaagttc gtttttccga tgatgcccgc cagcgaatgc tgaaaggcgt
     1741 caacgttctt gccaatgccg tcaaagtcac gctcggtccg aagggccgca acgtggtgct
     1801 cgaaaagagc ttcggcgctc cgaccgtcac gaaggacggc gtctcggtcg cgaaagagat
     1861 cgagctcgag gacaagttcg agaacatggg cgtccagatg gtgaaggagg tcgcttcgca
     1921 gacttccgac gccgccggcg atggtacgac gacggccacg gtgctcgcgc aagccatctt
     1981 ccgcgagggt ctgaaatccg ttgccgcggg cttcaacccg atggacctga agcgcggcat
     2041 cgacaaagcg accagcgcga tcatcgacga gctcaagaag ctgtcgcagc cgtgcaagga
     2101 cgacaagtcg atcgctcagg tcggcacgat ctcggcgaac gccgacgagg aaatcggcaa
     2161 gatcatcgcc gaggccatga gcaaggtcgg caaggaaggc gtgatcacgg tcgaggaagg
     2221 ctcgggtttg gctaacgagc tcgacgtcgt cgagggcatg cagttcgatc gcggctacct
     2281 ctcgctgtac ttcatcaacg accaggccac gcagtcggcg aatctggaga acccgctgat
     2341 cctgatccac gacaagaaga tctcgaacat ccgcgagctg ttgccgctgc tcgaggccgt
     2401 cgcgaaggcc ggtcggccgc tcttgatcat cgcggaagac atcgaaggcg aagcgctcgc
     2461 cacgctggtc gtgaacaaca tccgcggcat cgtgaaggtc gcggccgtca aggcgcctgg
     2521 cttcggcgat cgccgcaaag ccatgctcca ggacatcgcg atcctgacgg gcggtcaggt
     2581 catctccgag gaagtcggcc tgtcgctcga gaaggcttcg atgaacgatc tcggcgaggc
     2641 caagaaggtg caggtctcga aggagaacac gacgatcatc gacggtgccg gcaagaagtc
     2701 ggacatcaag ggccgcatcg atcagatcaa caaggagatc gaggagtcga cgtcggacta
     2761 cgatcgcgag aagctccaag agcgcgtcgc gaagctggcc ggcggtgttg ccgtcatcaa
     2821 ggtcggcgcc gcaaccgagg tcgagatgaa ggagaagaag gctcgcgtcg aggacgcgct
     2881 gcacgccacg cgcgcggccg tcgaagaggg cgtggtgccg ggcggcggcg tggctctgct
     2941 gcgcgcgctg aagggcatct cgactctgca aggcgcgaac gaggaccaga ctgtcggcgt
     3001 caacatcctg cgcaaggccg tcgaagagcc gctgcgccag atcgtcggca acgccggcac
     3061 cgatgcctcc gtcgtgctga atgccgtcgt gaacggcaag ggcaactacg gcttcaacgc
     3121 cgcgaacggc gagtatggcg acatggtgaa gttcggcatc atcgacccga cgaaggtcac
     3181 gcgtctggcg ctccagaacg cggcgtccgt cgcagggctc ttgctgacga ccgaggcgat
     3241 gatcgccgag gcgccgaagc aggagaagga agccgccggt gcgccgcacg ggcacggcat
     3301 ggacggaatg atgtaagcgt ctctcgagtc ctcaaggctc gaactggaag ccccgcacga
     3361 tgcggggctt tctttttaga agaacgagaa cgtaggtcgc gccgtcatca gccacagaat
     3421 gccgagcacg gctgcgaatg ccgggaagcc gaacgcgagc cacctccaga acaagcgatg
     3481 gtaaaggcgc ggcaacggcg agcctgcgcg tgccgcggcc gcagcgagat cgcgcattcg
     3541 aatctgcatc agcaccacgg gtacccagaa cgcgccggta acgacataga gcacgagcga
     3601 cagggcgatc cagccgtcga agatcgggta gccgaggaag cgcgccagca gaaatcccgt
     3661 caccggctgc acggctacgg ccgacgccgt gaagacgaag tccgcggtca cgacgatgcg
     3721 cgcaacgccg gcgatgatcg cggcgtcgcc ggtcgagtgc gccttcaaca tgaagaatgc
     3781 gatgccggcg ccggttccga gtagcacggt agcgccgacg atgtgcacgt actgcaacag
     3841 caagtagtag agcgtcatcg atcctcgacg atcgtgagcg ccgcgacgcg cactcgtgcg
     3901 ccctgagcga gcaacgccga tcgtgaactg gaagccctag cgcacgcgca acagagtgag
     3961 gccctcgccg accgtcagca tcgcgagatc gacgcgctcg tcgcggtgca tgcgctcgtt
     4021 gaagtcgtgc atggcctttg cgttcacgga gtcctgcgcg aacacaggtt tgccggccag
     4081 tgcgagcgta ttgtccacgg cgatcaggcc gccgcgccgc acgagcttca gcagtctttc
     4141 gtagtaggcc gagtagctcg gcttgtcggc gtcgatgaac gcgaagtcga actggcccgc
     4201 ttggccttcg gcgagcaggg cgtcgagcgt ctcgagcgcc ggcttgatgc gcaggtcgat
     4261 ccgcgaatcc acacccgctt tgcgccagaa gcgttgaccg atcgccgccc attcggcgtt
     4321 cacgtcacag gtgatcagct tgccgtcggc aggcaacgcc agcgcgacgg ccagcgcgga
     4381 gtagcccgtg aacgtgccga tctcaa
//
LOCUS       DATCUD010000014         1626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14340, whole genome shotgun sequence.
ACCESSION   DATCUD010000014 DATCUD010000000
VERSION     DATCUD010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14340"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..1075
                     /locus_tag="VIQ99_00275"
     CDS             329..1075
                     /locus_tag="VIQ99_00275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181599.1"
                     /translation="MAEAEPQVLMPARSATTQVTRRRFYVALAALMTLLVFVGFWPSY
                     YGPLTRGAARAPLILHVHGAIFIGWMALLVVQATLAARGRIRAHRALGNIGIGYGAVM
                     WVVGLIVSFVAPVLHVKAGEWSIDEAAAFLPIPFGDMVLFGSFFAAAVAYRARPEIHK
                     RLMLLATIAIVFAAAFRLQAAGVPQSAAIAIWYSPLVLAMAYDVWKRGRVHPVYFIGA
                     AAMAVALLRLPFGETELWLEVGRPLFAALT"
     gene            complement(1146..>1626)
                     /locus_tag="VIQ99_00280"
     CDS             complement(1146..>1626)
                     /locus_tag="VIQ99_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181600.1"
                     /translation="TGGALPCEPFPPPFISLFPDLRTIEINDATVVMRFEGAIGVPME
                     RVVHLDQSAHPVGVTPSLMGHSIGRWEGETLVIDTVGFTPHRFGVLVFPSGPNKHLVE
                     RFTLTKDRLQLEYTLTLEDPDVLAAPFSFTAIWNHRPDLEFSGVACDPEVARRAVEP"
BASE COUNT          278 a          485 c          560 g          303 t
ORIGIN      
        1 tcacgacacc aacattgcgg tggtggagtc ccgcctccga ggccaaagca gaggagatga
       61 caactctgtt ggcgagtgcg agacgataga gtgccggata acaaccggtt tcagcggacg
      121 gtcatacggc gtcatgtgcg cgccgcaggc gcgccgtggc ccggggcaat gctagtgatc
      181 aagtcgcgtg cctcgacgat agacgccgtg ggcgacctcg atgatacgat tgtcttcgcg
      241 gaggattagg acgcagctgt aggcactcgc gagcattagg cgtcgattta ggaacgccgg
      301 cagtctgcag ttcaacgggg ggactctcat ggccgaggcc gagccgcagg ttttgatgcc
      361 tgctcgcagc gctaccacgc aagttacgcg gcgccggttc tatgtggcgc tggcggcctt
      421 gatgacgctg ctcgtattcg taggcttctg gccgtcgtac tacggcccac tgacgcgcgg
      481 cgccgcccgc gcgccgctga tcctgcacgt gcacggcgcg atcttcatcg gttggatggc
      541 gctgcttgtc gtgcaagcga cgctggcggc gcgcggccgc atacgcgcgc atcgcgcact
      601 cggcaacata ggcatcggct atggtgccgt gatgtgggtg gtggggctca tcgtgagttt
      661 cgttgccccg gttctgcacg tgaaagccgg cgagtggtcc atcgacgagg ccgctgcgtt
      721 tttgccgatt ccgttcggcg acatggtgct cttcggcagc ttcttcgcgg cagcggtggc
      781 ctatcgcgcg cggcccgaga tccacaagcg gctgatgctg ctcgcgacga tcgcgatcgt
      841 gtttgccgca gcgttcagat tgcaggcggc cggtgtcccg cagagcgccg caatcgctat
      901 ctggtattcg ccgctcgtgc tcgccatggc ctacgacgtt tggaagcgtg gccgcgtgca
      961 tcccgtctat ttcattggtg ccgcggcgat ggcggtcgcg ctgctgcgcc tgccgttcgg
     1021 cgagacggag ctctggctcg aggtaggacg gccgctgttc gcggcgctga catgatcgag
     1081 cgagagaacg ggccgtcatc gcgacgaccc gagaccggga gaagcgcagg ctcgaaaaag
     1141 ttcgcctagg gctcaactgc tcgccgcgct acctccgggt cgcacgccac gcccgagaat
     1201 tccaggtccg ggcggtggtt ccagatcgcg gtgaaagaaa acggcgcggc aagaacgtcg
     1261 gggtcctcga gcgttaacgt gtactcgagt tggagacgat ccttcgtgag cgtgaaccgc
     1321 tcgacgagat gcttgttcgg tccggatgga aagacgagca ctccgaagcg atgaggagtg
     1381 aatccgacgg tgtcgatcac cagggtttcg ccctcccatc gcccgatcga atggcccatc
     1441 agcgatggtg tcacgccgac gggatgagca ctctgatcga ggtgaacgac gcgctccatg
     1501 ggcacgccga tggcgccctc gaagcgcatc acgacggtcg cgtcattgat ctcgatcgtg
     1561 cgcaggtcgg gaaagagcga gatgaacggt ggcgggaacg gctcgcacgg caaggcgccg
     1621 ccggtc
//
LOCUS       DATCUD010000015         2067 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21445, whole genome shotgun sequence.
ACCESSION   DATCUD010000015 DATCUD010000000
VERSION     DATCUD010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21445"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..261)
                     /locus_tag="VIQ99_00285"
     CDS             complement(<1..261)
                     /locus_tag="VIQ99_00285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181601.1"
                     /translation="MKLATDLGDQYLATLSEIQENFLKASTAFASKFTPPTPAVELPA
                     AFAAAMPTPAEVTEASFAFAQKLLKQQKSFAEKLLATSTPATK"
     gene            complement(381..1436)
                     /locus_tag="VIQ99_00290"
     CDS             complement(381..1436)
                     /locus_tag="VIQ99_00290"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY9181602.1"
                     /translation="MRRLLQPMVSASAMPAQAEILDVSYPQLRAALEARAVLEAGAVW
                     LRLSRGTISQSTSAALYERLRLMLAQVRNGREFIDRAAFFAANDSFHASVVALAENEH
                     LSLGFKRLRLRDLFLSAMKDTPVAAENLVYFHEFLTDSIAAGDASHAVKAILSWGKQS
                     STSVRLTLAPQGDASSQSALRPAEIVEDLSLAVAKEQDSLAGDIDALVLALDARAALE
                     IGITQSLGTALSVEAERDTLVARLRAFTPLVRGTSASHVLRYIRADDAFHRVFLSLLR
                     NQHLFDIYNAMDLPELMRRVIAVAPISIREVFDDHKGLTNALKSGDADATSAAITEAA
                     NRVRAALAAFLAAANKA"
     gene            complement(1419..2067)
                     /locus_tag="VIQ99_00295"
                     /pseudo
     CDS             complement(1419..2067)
                     /locus_tag="VIQ99_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013133099.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
BASE COUNT          330 a          675 c          701 g          361 t
ORIGIN      
        1 cttcgtcgcg ggcgtgctcg tcgcgagcag cttctcggcg aagctcttct gttgcttcag
       61 cagcttctgc gcgaacgcga agctcgcttc cgtcacctcg gccggggtcg gcatggcggc
      121 ggcgaacgca gccggcagct cgacggccgg ggtcggcggc gtgaacttcg acgcgaacgc
      181 ggtcgaagcc ttcaggaagt tctcttggat ctcgctcaag gtcgcgaggt actggtcgcc
      241 gaggtcggtc gccagcttca cataattcga catcgatcgg gctcctgttt tgcgggggcg
      301 tttcctaacc acgtgcgtag tatgcaacgc acatgcagcg taagtcaagc gcccgatgct
      361 cgggcctgaa aagcagcgga ctaggccttg ttggccgcgg ccaggaaggc cgcgagggcg
      421 gcccggaccc gattggcggc ctcggtaatc gcggcgctcg tggcatccgc atcaccggac
      481 ttgagcgcgt tcgtgaggcc cttgtggtcg tcgaacacct cgcggatcga gatcggggcg
      541 accgcgatca cgcgccgcat cagctccggc agatccatcg cgttgtagat gtcgaacagg
      601 tgctgattcc tgagcaggct caggaacacg cgatggaacg cgtcatcggc gcggatgtag
      661 cgcaggacgt gcgaagccga cgtgccccgc acgagcggcg tgaaggcgcg caagcgggcg
      721 acgagggtat cgcgctcggc ttcgaccgac aacgccgtgc ccagcgattg cgtgatgccg
      781 atctcgagcg ccgcgcgtgc gtcgagcgcg agcacgagcg cgtctatgtc cccggcgagg
      841 ctgtcttgct ccttggccac ggccaacgac aggtcctcga cgatttcggc gggacgcagc
      901 gcgctctgcg agctcgcatc gccttgcggc gcgagggtga gtcgcaccga agtcgagctc
      961 tgcttgcccc acgacagaat cgccttgacc gcgtgcgacg cgtcgccggc cgcgatcgag
     1021 tccgtcagga actcgtggaa atagacgagg ttctcggctg caaccggcgt gtccttcatg
     1081 gccgacagga atagatcccg caaccggagg cgcttgaagc cgagcgacag gtgctcgttc
     1141 tcggcgagag cgacgacgct ggcatggaag ctgtcgttgg ccgcgaagaa tgcggcgcgg
     1201 tcgatgaact cgcggccgtt gcggacctgc gcgagcatca gcctgagcct ttcgtacagc
     1261 gctgccgatg tcgactgcga gatcgtgccg cgcgacaggc gcagccagac cgcgccggct
     1321 tcgagcaccg cgcgcgcctc gagcgcggcg cgcagctgcg ggtacgagac gtcgaggatc
     1381 tcggcctgcg ccggcatcgc gctcgcgctc accatcggct gcagcagccg acgcatgatc
     1441 ttgccgctcg tcgtcttcgg caggtcgtcg aggatctcga cgagacgcgg atacttgtag
     1501 gcggccatgc gctcgcgcgc gaacgctcgg atctcttcgg tcgtgaccgt atgcccgggc
     1561 ttcaagctga tgacggcctt gatggtttct ccgcgatacg ggtccggcac gccgacgacg
     1621 gcggcctcgc gcacggccgg gtgctgatac agcacctcct cgacctcgcg cggccagacc
     1681 ttgaaacccg aggccacgat catgtccttc gagcgatcga cgagatagaa ccagccggcc
     1741 tcgtccatga aaccgacgtc gccggtcttc aagccgtctg gcgtcagtga cttcgccgtc
     1801 tcctcgggct tctgccaata ccccgggacg atctgcgggc ccgcgatcac gaactcgccg
     1861 atctcgtgtg gcgccgcttc gcggccgtct tcggtgacga ccttcacgtg cgtactgaac
     1921 acgggcacgc cgacggacat cgcgccggtg tgaggatcga tcggcgggat cgcgccgtgt
     1981 ggcgtcatgt gcgtgggcga cgtcgcttcg gtcaatccgt ccatcggctg gatccgcacg
     2041 ccggttcgcg tgtgccaatc gtcgagg
//
LOCUS       DATCUD010000016         2219 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49865, whole genome shotgun sequence.
ACCESSION   DATCUD010000016 DATCUD010000000
VERSION     DATCUD010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2219
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49865"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2219
                     /locus_tag="VIQ99_00300"
     CDS             <1..>2219
                     /locus_tag="VIQ99_00300"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017940462.1"
                     /note="DNA-dependent RNA polymerase catalyzes the
                     transcription of DNA into RNA using the four
                     ribonucleoside triphosphates as substrates. Subunit beta'
                     binds to sigma factor allowing it to bind to the -10
                     region of the promoter; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY9181603.1"
                     /translation="YYMTRERANARGEGMSFADVEEVHRAYESGAIELHAKIRVRIRE
                     RVGGVATSKLTNTTVGRALLSEILPDGMPFEQINRAMNKRAISATINLCYRQLGLKET
                     VVFADQLMYTGFHYATRAGVSFGVNDMVVPKEKQSILESAESEVKDIQDQYAAGLVTD
                     GERYNKVVDIWSRTNDQVAKAMMDKLGVELVAEGAGKGTQQESFNSIYMMADSGARGS
                     AAQIRQLAGMRGLMAKPDGSIIETPITANFREGLDVLQYFISTHGARKGLADTALKTA
                     NSGYLTRRLVDVAQDLVVTELDCGTTTGLLMTPLVEGGDIVEPLRERVLGRAAAVDVL
                     APGSDKVVLTAGTLLDESAVKTLEQYSIDQVLVRSPITCETKYGVCAQCYGRDLARGH
                     RVNRGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRSAAVNSVEVKSAGTIRYNNVKT
                     VTHEQKGHRITTSRSGELAVVDEFGRERERYKVPYGASLGVKDGEAVQPGQLVASWDP
                     HTHPVVTEVSGYLKFEDFIDGVTVTSQVDEITGLTSIVVLDAAQRSSDYRPTAKLVDS
                     HGKAVNFPNTDIPAAYALPSGAVLSMENGSRVVVGDVLARLPQESSKTRDITGGLPRV
                     ADLFEARRPKDPAILAEYSGTVSFGKETKGKRRLVITDEEGEEHEELIPKWRHLNVFE
                     GEKVLRGEIIADGEPNPHDILRLQGVEKLADYLVREIQDVYRLQGVKINDKHIEVIIR
                     "
BASE COUNT          420 a          703 c          759 g          337 t
ORIGIN      
        1 tactacatga ctcgcgagcg tgcgaacgcg cgcggcgagg gcatgtcgtt cgccgacgtc
       61 gaggaagtgc atcgcgccta tgagtccggc gcgatcgagc tgcacgcgaa gattcgcgtg
      121 cggattcgcg agagagtcgg cggcgtcgcg acgtcgaagc tcacgaacac gacggtcggt
      181 cgggcgctgc tgtccgagat cctgccggat ggcatgccgt tcgagcagat caaccgcgcc
      241 atgaacaagc gcgcgatctc ggccacgatc aacctgtgct atcgccagct cggcctcaag
      301 gagaccgtgg tcttcgccga ccagctgatg tacacgggct tccactacgc gacgcgcgcc
      361 ggcgtgtcgt tcggcgtgaa cgacatggtc gttccgaagg agaagcaatc gatcctcgag
      421 agcgccgaga gcgaggtcaa ggacattcaa gaccagtacg cggcaggtct cgtgacggac
      481 ggcgagcgct acaacaaagt cgtcgacatc tggtcgcgca ccaacgatca ggttgcgaag
      541 gccatgatgg acaaactcgg cgtcgagctc gtcgccgagg gtgcgggcaa gggcacgcaa
      601 caggagtcgt tcaactcgat ctacatgatg gccgactcgg gcgcgcgcgg ctccgcggcg
      661 cagattcggc agctggccgg catgcgcggc ctcatggcga agcccgacgg ctcaatcatc
      721 gagacgccga tcacggcgaa cttccgtgaa ggtctcgacg tgttgcagta cttcatctcg
      781 acgcacggtg cgcgcaaggg ccttgccgac acggcgctca agaccgcgaa ctcagggtat
      841 ttgacgcgtc gcctcgtcga cgtcgcgcag gatctcgtgg tcaccgagct cgattgcggc
      901 acgactacgg gcctgctcat gacgccgctc gtcgagggcg gagatatcgt cgagccgttg
      961 cgcgagcgcg tgctcggccg cgcggcggcc gtcgacgtgc tggcgccggg ctcggacaag
     1021 gtcgtcctca cggccggcac gctgctcgac gagagcgccg tgaagacgct cgagcagtat
     1081 tcgatcgacc aggtgctcgt gcggtcgccg atcacctgcg agacgaagta cggcgtctgc
     1141 gcccagtgct acggccgcga cttggcgcgc ggtcaccgcg tgaatcgcgg cgaagccgtc
     1201 ggcgtcatcg cggcgcaatc gatcggcgag ccgggcaccc agctcacgat gcgcacgttc
     1261 cacatcggcg gcgcggcatc gcgctcggcc gcggtgaaca gcgtggaggt caagagcgcc
     1321 ggcacgatcc gctacaacaa cgtgaagacg gtcacgcacg agcagaaggg ccaccggatc
     1381 acgacgtcgc gatccggcga gctcgccgtc gtcgacgagt tcggccgcga gcgcgagcgc
     1441 tacaaggttc cgtacggcgc ttcgctcggc gtcaaggatg gcgaggccgt gcagccgggt
     1501 cagctcgtcg cgagctggga tccgcacacg caccccgtcg tcacggaggt cagcggctac
     1561 ttgaagttcg aagatttcat cgacggcgtg accgtgacgt cgcaggtcga cgagattacg
     1621 ggcttgacca gcatcgtggt gctcgacgcg gcgcagcgca gcagcgacta tcggccgacc
     1681 gcgaagctcg tcgacagcca cggtaaggca gtgaacttcc cgaacaccga catcccggcc
     1741 gcgtacgcat tgccgtcggg tgcggtgctc agcatggaga acggctcgcg cgtggtcgtc
     1801 ggtgacgtgc tcgcgcgctt gccgcaggag agctcgaaga cccgcgacat cacgggcggt
     1861 ctacctcgag tcgccgatct gttcgaggcg cgtcgaccca aggatcccgc gatcctggcc
     1921 gaatactcgg gtacggtcag cttcggcaag gagaccaagg gcaagcgccg gctcgtgatc
     1981 accgacgagg agggcgagga gcacgaggag ctgattccga agtggcgcca cttgaacgtg
     2041 ttcgagggcg aaaaggtgct gcgcggcgag atcatcgccg acggcgagcc gaacccgcac
     2101 gacatcctgc ggctgcaggg cgtcgagaag ctggccgact acctcgtgcg cgagatccag
     2161 gacgtctacc gcctgcaggg cgtcaagatc aacgacaagc acatcgaggt catcattcg
//
LOCUS       DATCUD010000017         3108 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78292, whole genome shotgun sequence.
ACCESSION   DATCUD010000017 DATCUD010000000
VERSION     DATCUD010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78292"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2328)
                     /locus_tag="VIQ99_00305"
     CDS             complement(<1..2328)
                     /locus_tag="VIQ99_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008621094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9181604.1"
                     /translation="MERLTTLAFSTLLYGIAIAMKFTAWRHPAFRERLKEQNVTAQIR
                     VKAGTGRYYVIKDGRISSRHGIHPNPDVVVTVKSARLGLQIFTHPNDQLGRINAAKSF
                     SMTLDGPQDKAIWFMFTLEAMMQAGWRYGVDVGNGEIRYVNMANGGPLHVYVKDGKIV
                     RMTPIEFDENDPQPWTIKAKGKEFTPPRKTSLAPHGQTVKSTVYSPDRILYPMKRVDF
                     DPNGERNPQNRGISGYERISWDEALDIVANEIKRQKTVHGNGAIACSHPSHHAWGNIG
                     YYLSALRKFENAVGMTEVHHNPDSWEGWYWGATHHWGGSMRVGQSETYGTVEDCLKEA
                     EMVVFWSSNPESNSGAYGALEGTIRRQWLKEAGIKLVHIDPYYNDSIQLLGGKWIAPR
                     PTSSPALALGIAYVWITEGTYDKKYIETRTHGFDKWRDYVLGKTDGIPKSPEWQEAET
                     GVPASDVRALAREWASKKTYLGAGAWGNGHGGACRNATGIQWARTMVCLIAMQGLGKP
                     GVNMGNLQWGTPLDFNFYFPGYAEGGMSGDFSHTAMGVVLYQRMPQLPSINTNTQIIP
                     RMQLPDAIIEGKAEGYLWNGSSIEAQFQKITYPKPGFSPVHMLWKYGGSLIASMPDSN
                     RYINMFRHPNLECLVSQNIWMHGDTEFADIILPACTNFERYDISEWAGLGGYAHHGEQ
                     QLNHRVIVFQHKCIEPLGESKSDFWIFQKICERLDLAAYFTEGVGELGWVKRQFDGSD
                     LPKYISWKDFIRRGYFVVPTEKEEQRAPLSWNWFYE"
     gene            2542..>3108
                     /locus_tag="VIQ99_00310"
     CDS             2542..>3108
                     /locus_tag="VIQ99_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9181605.1"
                     /translation="MSAVAIEGSEKVLKSVCRSCHGGCSTLMHVKDGKLTKVEGDPEG
                     PLNHGYLCPIGAATTQLVYHPDRLKYPMRRVGPKGSGKWQRISWDEALDEISEKVLKI
                     RAETGPESIAMGTGTGRHHIRWVSRFGNALGTPNWCEPGFAQCFHPRVNTCIQTMGDF
                     PVCDFTGGTPPQVIMYWGHNPPHSGPDGE"
BASE COUNT          515 a          989 c          967 g          637 t
ORIGIN      
        1 ctcgtagaac cagttccacg atagcggcgc gcgctgctct tctttctccg tcgggacgac
       61 gaagtagccc cttcgaatga aatccttcca ggagatgtat ttcggcaagt ccgatccgtc
      121 gaattgccgc ttgacccatc caagctcgcc gacgccttcg gtgaaatagg ccgcgaggtc
      181 gaggcgctcg cagatcttct ggaagatcca gaagtccgat ttcgattcgc cgagcggctc
      241 gatgcacttg tgctggaaca cgatcacgcg atggttcagc tgctgctcgc cgtgatgcgc
      301 gtagccgccc aagcccgccc actcgctgat atcgtagcgc tcgaagttcg tgcaggcggg
      361 caggatgatg tccgcaaact ccgtgtcccc gtgcatccag atgttctggc tcacgaggca
      421 ctcgaggttc gggtgccgga acatgttgat gtagcggttg ctgtccggca tcgacgcgat
      481 caacgagccg ccatacttcc agagcatgtg caccggcgag aatccgggct tcggatacgt
      541 gatcttctgg aactgcgctt cgatgctcga gccgttccag agatacccct ccgctttgcc
      601 ctcgatgatc gcgtcgggca gctgcatgcg cggaatgatc tgcgtgttcg tgttgatcga
      661 cggcagctgc ggcatgcgct gatacagcac gacgcccatc gccgtatggc tgaagtcgcc
      721 cgacatgccg ccttcggcgt agcccgggaa atagaagttg aaatcgagcg gcgtgcccca
      781 ctgcaggttg cccatgttga cgccgggctt gcccaagccc tgcatcgcga tcaggcagac
      841 catcgtgcgc gcccactgaa tgcccgtcgc gttgcggcac gctccgccgt ggccgttgcc
      901 ccaggcgcct gcgccgagat acgtcttctt gctggcccat tcacgcgcga gcgcgcgcac
      961 gtcgctcgcg ggcacgccgg tctcggcttc ctgccactcc ggcgacttcg ggatgccgtc
     1021 ggttttgcct agcacgtagt cgcgccattt gtcgaagccg tgcgtgcgcg tctcgatgta
     1081 cttcttgtcg tacgtgccct cggtgatcca gacgtacgct atgccaagcg cgagcgcggg
     1141 gctcgacgtg ggccgcggcg cgatccactt gccgcccaag agctgaatcg agtcgttgta
     1201 gtacggatcg atgtgcacga gcttgatgcc ggcttccttg agccactgtc ggcgaatcgt
     1261 gccttcgagc gcgccgtacg cgccgctgtt cgattccggg ttgctcgacc agaacacgac
     1321 catctcggct tctttgaggc aatcctcgac ggtcccgtag gtctccgatt ggccgacgcg
     1381 catcgagccg ccccagtgat gcgtcgcgcc ccagtaccaa ccttcccagc tgtccgggtt
     1441 gtgatgcacc tcggtcatac cgaccgcgtt ctcgaacttg cgcagcgccg agaggtagta
     1501 accgatgttg ccccacgcgt gatgcgacgg gtggctgcac gcgatcgcgc cgttgccatg
     1561 cacggtcttc tggcgcttga tctcgttcgc gacgatgtcg agcgcctcgt cccagctgat
     1621 gcgttcgtaa cccgagatgc cgcggttttg cgggttgcgc tcgccgttcg gatcgaagtc
     1681 gacgcgcttc atcggataca agatccggtc cggcgagtag accgtcgact tgacggtctg
     1741 gccgtgggga gcgagcgacg tcttgcgcgg cggcgtgaac tccttacctt tcgccttgat
     1801 cgtccatggc tgcgggtcgt tctcgtcgaa ctcgatcggc gtcatgcgca cgatcttgcc
     1861 gtccttgacg tagacgtgga gcggtccgcc gttcgccatg ttgacgtaac ggatctcgcc
     1921 attgccgaca tcgacgccgt agcgccatcc ggcttgcatc atcgcctcga gcgtgaacat
     1981 gaaccagatg gctttgtcct gcggtccgtc gagcgtcatg ctgaagctct tcgccgcatt
     2041 gatcctgccg agctggtcgt tcggatgcgt gaagatctgt aacccgagcc gagcgctctt
     2101 gaccgtgacg acgacgtcgg gattcgggtg gatgccgtgg cgcgacgaaa tccggccgtc
     2161 cttgatgacg tagtagcggc ccgtcccggc cttcacgcgg atctgcgccg tgacgttctg
     2221 ctccttcagg cgctcgcgaa aggctggatg tcgccacgcg gtgaatttca tagcgatcgc
     2281 gattccgtaa agcagcgtcg aaaacgcgag cgtggtgagt ctttccatca ggcttggcct
     2341 tcccccgttt taacatctgc gtccggctcg ccggtccggg cgctcttttc cgttgcgccg
     2401 cactgttacg cgcgcggcgc gcggtcgttc gggcagcggt ttcaactggg catcataaag
     2461 cgcagggcca accgatcgct agcctgcagg cgttctgcta agctccgtga aaacaaggcc
     2521 ttcgtagttc gggggaacga cgtgagcgct gtagcgatag agggaagcga gaaggttctg
     2581 aagagcgtat gccgcagctg ccacggcggt tgcagcacgt tgatgcacgt caaggacggc
     2641 aagctcacga aggtcgaagg cgatcccgag ggcccgctga atcacggcta tctctgcccg
     2701 atcggtgccg cgaccacgca gctcgtgtat caccccgacc gtttgaagta cccgatgcgc
     2761 cgcgtcgggc cgaaaggctc cggcaagtgg cagcgcatct cgtgggacga agcgctcgac
     2821 gagatcagcg agaaggtgct gaagatccgc gcggagaccg ggcccgagtc gatcgcgatg
     2881 ggcacgggca cgggccgcca ccacatccgt tgggtatcgc gtttcggcaa cgcgctcggc
     2941 actcctaact ggtgcgagcc cggcttcgcg cagtgcttcc acccgcgcgt caacacgtgc
     3001 atccagacga tgggcgattt ccccgtctgc gactttacgg gcggtacgcc cccgcaggtc
     3061 atcatgtatt ggggccacaa tccgccgcat tccggccccg acggtgag
//
LOCUS       DATCUD010000018         1906 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42739, whole genome shotgun sequence.
ACCESSION   DATCUD010000018 DATCUD010000000
VERSION     DATCUD010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42739"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1184
                     /locus_tag="VIQ99_00315"
     CDS             <1..1184
                     /locus_tag="VIQ99_00315"
                     /inference="COORDINATES: protein motif:HMM:NF023591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau C-terminal
                     domain-containing protein"
                     /protein_id="HEY9181606.1"
                     /translation="HVKFLLATTDPQKLPVTVLSRCLQFNLKRFTVAQIQAQLEKICK
                     AEGIAFDTAGLKAIARGAEGSMRDALSLLDQSIAFGAGKIEGAAVNAMLGTIDRSHVL
                     RLIESLAGQDGAALLSEVERLDERAPDYGTLLDELLEGLQRIAVLQLVGGRSDDEDLA
                     MLAPFAEKMSAEDVQLYYQIALNGRRDLPVCRDPRMGFEMTLLRMLAFRPAEEASTPR
                     AQTVRASGGPTSPPATTRVAAPTAVARSDAPPKRESAEPAPRGSVGAAPVAADWTSVV
                     QSLDLRGPARQLADSCDLKSNQAGAWHLIVPADKEHLNTQQLRTRLEAALREQHGRDL
                     RLTITVGKPVRPTPAEARRSSESTRMREVRETLEADANVRAVQAAFDATLEPDSIRSS
                     K"
     gene            1211..1531
                     /locus_tag="VIQ99_00320"
     CDS             1211..1531
                     /locus_tag="VIQ99_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013965806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEY9181607.1"
                     /translation="MKGLSQLMRQAEAMQANMQKAQDELAATEVEGQSGGGMVKVVVT
                     CKHEVRRVTIEDALLRDDKEMLEDLVAAAFNDANRKIEQTVQQKMSSIAGGLGLPGGL
                     KLPF"
     gene            1535..>1906
                     /locus_tag="VIQ99_00325"
     CDS             1535..>1906
                     /locus_tag="VIQ99_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007225031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEY9181608.1"
                     /translation="MADVYSPLLNQLIEAFQCLPGVGSKTAQRLAFHLLDKDREGGTR
                     LAATLERAVSSIRNCERCRMLTEESVCRFCASDKRDSSQLCVVETPADLLAIEQSGAY
                     RGAYFVLMGHLSPIDGIGPAEL"
BASE COUNT          349 a          572 c          672 g          313 t
ORIGIN      
        1 cgcacgtgaa gttcctgctc gcgacgacgg acccgcaaaa gttgccggtc accgtcctgt
       61 cgcggtgcct gcagttcaac ttgaagcgct tcacggtcgc acaaatccag gcgcagctcg
      121 aaaagatctg caaggccgaa ggcatcgcgt tcgacacggc gggtctcaag gcgatcgcgc
      181 ggggcgcgga gggcagcatg cgcgacgcgc tgagcctgct cgaccaaagc atcgcgttcg
      241 gggccggcaa gatcgaaggc gcagccgtga atgcgatgct gggcacgatc gatcgcagcc
      301 acgtcctgcg cctgatcgaa tcgttggcag ggcaggacgg tgccgcgttg ttgagcgagg
      361 tcgagcggct cgacgagcgg gcgcccgact acggcacgtt gctggacgag ctactcgagg
      421 ggttgcagcg aatcgcagtt ctgcagctcg tcggtggccg ttccgacgac gaggatctcg
      481 cgatgctggc gccgttcgcg gaaaaaatgt ccgccgagga cgtgcagctc tattaccaga
      541 ttgctctgaa cggccgccgc gatttgccgg tctgccgcga tccgcgaatg ggtttcgaga
      601 tgaccctgtt gcggatgctc gcgtttcggc cggctgagga agcgagcacg ccgcgcgctc
      661 aaactgtgcg cgcctccggt gggccgacgt cgccgccggc gacgacgcgc gtcgctgctc
      721 cgacggccgt ggcccggtcc gatgcgccgc cgaagaggga gagcgcggag cccgcgcctc
      781 gcgggagcgt cggggcggcg cccgtggctg cggattggac gagcgtcgtg cagagtctcg
      841 acctgcgtgg gcctgcgcgc cagttggccg atagctgcga cctcaagtcg aaccaggcgg
      901 gcgcgtggca cctgatcgtg ccggccgaca aggaacatct gaacacgcag cagctgcgca
      961 cgcggctcga agcggcgttg cgcgagcagc atggtcggga tttgcgcttg acgatcacgg
     1021 tcggcaagcc cgtacggccg acgcctgccg aagctcggcg ctcgagtgag agcacgcgga
     1081 tgcgggaagt cagggagacg ctcgaggccg atgccaacgt cagggccgtg caggccgcct
     1141 tcgatgcgac cttggagccg gatagcattc gttcgagcaa gtaggcggtc atgaagtcga
     1201 gaggtggagt atgaagggct tgagccaatt gatgcggcaa gcggaagcga tgcaggccaa
     1261 catgcagaaa gcacaggacg agcttgcggc cacggaagtc gaaggccaat ccggcggcgg
     1321 catggtcaag gtcgtggtca cctgcaagca cgaagtacgt cgcgtgacga tcgaagacgc
     1381 gttgctgcgc gacgacaagg aaatgctcga agacctcgtc gcggcggcgt tcaatgacgc
     1441 caatcggaag atcgaacaaa ccgtgcagca aaagatgtcg tcgatcgccg gtggccttgg
     1501 gctaccgggc gggctgaagc tgcctttcta gtccgtggcc gacgtctact caccgctgct
     1561 gaaccaactc atcgaggcgt ttcaatgcct gccgggcgtg ggctcgaaaa ccgcgcagcg
     1621 gctcgccttt catttgctcg acaaggatcg cgagggaggg acgcgattgg cggccacgct
     1681 cgagcgcgcc gtgagctcta tccgcaattg cgagcgttgc cgaatgctga ccgaggagtc
     1741 agtctgccgg ttttgcgcca gcgacaagcg ggactcgtct cagctgtgtg tcgtcgaaac
     1801 gcccgccgac cttctggcga tcgagcagtc cggtgcgtat cggggcgcct acttcgtgct
     1861 gatggggcat ttgtcgccga tcgacggaat cggtccggcc gagctc
//
LOCUS       DATCUD010000019         2086 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_28587, whole genome shotgun sequence.
ACCESSION   DATCUD010000019 DATCUD010000000
VERSION     DATCUD010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2086)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28587"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..720
                     /locus_tag="VIQ99_00330"
     CDS             241..720
                     /locus_tag="VIQ99_00330"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9181609.1"
                     /translation="MRVLVSSLALLVVSQVANAAEPVVAASPEAQRAMLASSDPQLAA
                     NKKLVWDMWRTFLQGGDIDAADKYLAPEYHQHNPNAETGLEGVKAYFRAQNRQATPPK
                     DYIDRLVAIVAERDLVTLALVREGKDKDGNAYTTTWFDMFRVANGKIVEHWDTATKP"
     gene            complement(726..1616)
                     /locus_tag="VIQ99_00335"
     CDS             complement(726..1616)
                     /locus_tag="VIQ99_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006980288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HEY9181610.1"
                     /translation="MTPRPLKVGLVQMAMGVEPPPNLDKAIEGVRAAAKRGAQLVVLP
                     ELFRSRYFCQSEDAAHFGLAEAVPGPSTEVLGKLAAELRVTLVASLFEKRAAGLYHNT
                     AAVLDGDKGFIGKYRKMHIPDDPRYYEKYYFTPGDLGFKVFHTQPAELGVLVCWDQWY
                     PEAARLTAMQGAEILAYPTAIGWHPEEKKQYGERQHSAWETIQRSHAVANGCFVIAVN
                     RTGFEPDPRGSGGIEFWGQSFIAGPDGRVIVRGPVDREAVIVEEIDLAEIDSVRAGWP
                     FFRDRRIDAYADITRRFAKD"
     gene            complement(1613..>2086)
                     /locus_tag="VIQ99_00340"
     CDS             complement(1613..>2086)
                     /locus_tag="VIQ99_00340"
                     /inference="COORDINATES: protein motif:HMM:NF037681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEY9181611.1"
                     /translation="EHPDKRAVLVDLTCDSDGKVTHYVSARDNRFLPVHPTVNGTPYY
                     LGFFLMGAYEDIIGDAHNLFGRVTEAHIYADPDEDGDFWIEKIIHGTAVQDMLAQVQY
                     FPNDLHRRMSELVRAKIQQNVVRPTQGMEILDQYMACFPQTTYCDTRDIEREHQR"
BASE COUNT          365 a          680 c          682 g          359 t
ORIGIN      
        1 cgcgtggcca cgtatacgtt ccagaatgcg ctgaagcccg tgtggccgcc gaagagcccg
       61 tggggcgacg cgcacgatca cgacgactgg aaggatcgtg actagtcgct gacggaaggg
      121 acaggcgact cggcctgtcc cttcccgcct cgcgcgcggc tcgcaacgtc ggcgggcacg
      181 ccctgctata gtctgcgtgc tcgaccggac aacaccaacc aacgttttgg agcacaaccc
      241 atgagagttc tcgtcagctc actcgccttg ctcgtcgtat ctcaagtcgc gaacgccgcg
      301 gagcccgtcg tggccgcttc gccggaagct caacgcgcga tgctcgcgag cagcgacccg
      361 cagctcgccg cgaacaagaa gctcgtgtgg gacatgtggc gcacgttctt gcagggcggc
      421 gacatcgacg cggccgacaa atacttggcg cccgagtatc accagcacaa tccgaacgcc
      481 gaaacgggtc tcgaaggcgt gaaggcgtac ttccgcgcgc agaaccgcca agcgacgccg
      541 ccgaaggact acatcgatcg gctggtcgcg atcgtggccg agcgcgatct cgtcacgctc
      601 gcgctcgtgc gcgaaggcaa ggacaaggac ggcaacgcct acacgacgac ctggttcgac
      661 atgttccgcg tggcgaacgg caagatcgtc gagcactggg acacggccac gaagccgtaa
      721 aggcgtcagt ctttcgcgaa ccggcgcgtg atatcggcgt aggcgtcgat gcgccggtcg
      781 cggaagaacg gccaaccggc acggaccgag tcgatctcgg cgaggtcgat ctcctcgacg
      841 atcacggcct cgcgatcgac gggtccgcgc acgatcacgc ggccgtcggg gcccgcgatg
      901 aagctctggc cccagaactc gatgccgccc gagccccgcg ggtcgggctc gaagccggtg
      961 cggttcacgg cgatcacgaa gcagccgttc gcgacggcgt gactgcgctg gatcgtctcc
     1021 caggcactgt gctggcgctc gccgtattgc tttttttcct cggggtgcca accgatcgcg
     1081 gtcggatacg cgagaatctc ggcgccctgc atcgcggtca ggcgcgcggc ctcgggatac
     1141 cactgatccc agcacacgag cacgccgagc tcggccggct gcgtgtgaaa caccttgaac
     1201 ccgaggtcgc cgggcgtgaa gtaatacttc tcgtaatagc gcgggtcgtc gggaatgtgc
     1261 atcttgcgat atttgccgat gaaccccttg tccccgtcga gcacggccgc ggtgttgtga
     1321 tagagcccgg ccgcgcgctt ctcgaatagg ctcgcgacga gcgtgaccct cagttcagcg
     1381 gccagcttgc cgagcacttc ggtgctcggc cccggaacgg cttcggcaag accgaagtgc
     1441 gccgcgtcct cgctctgaca gaaataacgc gagcggaaca actcgggcag cactacgagt
     1501 tgtgcgccgc gcttcgccgc ggcccgcact ccttcgatcg ccttgtcgag gtttggcggg
     1561 ggctcgacgc ccatcgccat ctgcacgagc ccgactttga gcgggcgtgg cgtcatcgct
     1621 ggtgctcgcg ctcgatgtcg cgcgtgtcgc agtaagtcgt ctgcgggaag cacgccatgt
     1681 actgatcgag gatctccatg ccctgcgtcg ggcgcacgac gttctgctgg atcttcgcgc
     1741 gtacgagctc gctcatgcga cggtgcaagt cgttcgggaa gtactgcacc tgcgcgagca
     1801 tgtcctgcac cgccgtgccg tggatgatct tctcgatcca gaaatcgccg tcctcgtcgg
     1861 gatcggcgta gatgtgcgcc tccgtcacgc ggccgaacag attgtgcgcg tcgccgatga
     1921 tgtcttcata ggcgcccatg aggaagaagc ccaagtagta cggcgtaccg ttgacggtgg
     1981 ggtgcacggg caggaagcga ttgtcgcgcg cggacacgta gtgcgtgacc ttgccgtccg
     2041 agtcgcacgt gaggtccacc agcacggcgc gcttgtccgg gtgctc
//
LOCUS       DATCUD010000020         2982 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_64100, whole genome shotgun sequence.
ACCESSION   DATCUD010000020 DATCUD010000000
VERSION     DATCUD010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2982
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64100"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VIQ99_00345"
     CDS             complement(<1..589)
                     /locus_tag="VIQ99_00345"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9181612.1"
                     /translation="MNRIRRVAVVTLLAAASAAHAQQTVPFANGIPVAPEMPIPAMPE
                     HPVEYMTAEGMPIRVSVVTRGISHPWSIAFLPNDVWLVTQTHGGLRVVRNGVLDPAPV
                     AGVPEVKPLRRSGLLEVTLHPSFAANGYVYLTYHKALPDDKGALALARGRWDGKALLD
                     VRDLFVTLPDSGTVSRMVFGPDGKIYMSTAGGDAQD"
     gene            complement(752..1279)
                     /locus_tag="VIQ99_00350"
     CDS             complement(752..1279)
                     /locus_tag="VIQ99_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013030682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase"
                     /protein_id="HEY9181613.1"
                     /translation="MWKTLRQIGSVGIVTEPPPSPADELRVREHLQKKILDTLGRALC
                     IRQVDAGSCNGCELEIHALNNAFYNLEGLGIRFVASPRHADLLLVTGPVARNMELALK
                     RTYDATPDPKLVVAVGDCGATGGIFGTSYASAGPVSSVIPVDVAVPGCPPSPNRILAA
                     ILAAVSTADAKPIAR"
     gene            complement(1286..2815)
                     /locus_tag="VIQ99_00355"
     CDS             complement(1286..2815)
                     /locus_tag="VIQ99_00355"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010810542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY9181614.1"
                     /translation="MTLRNWLDSSRALRGAPGAREIGVDADGWRQAALDLAAGGARLQ
                     ALWTELDPCAVRAVFDGDGFLLAVTLPLPDAEPVYPGLSHIFPSANRMQRAAADLTGV
                     RAEDSDSRPWLRHAAWPADYRPLVAGAAPSPPRELWADDYVFVRVAGDGVHEIPVGPV
                     HAGVIEPGHFRFSVVGEKVLKLEERLGYVHKGIEQRFARMPLLEGHRLAARVSGDSAV
                     AFSWAYCQALEGMTHSAPPPRAVWLRALALESERIANHLGDLGALGNDAGFAFALAQL
                     SRLKELWLRATHAAFGQRYLLDFVVPGGVANDPRPEDLEALVACARDVEKDAAAVRDI
                     FDEHAGVRDRFVGTGIVTPDLAVRLGLVGLAARASGQSKDLRVDLPCEPYTELAVRTA
                     MRRAGDVAARVAVRFDELSESVRLVAAIVARAPSGSLLNAVSTPPQGECGVGAIEGWR
                     GPVIVALTAGDSGGIRRCHPHDPSWQNWPVLEHAIIGNIVPDFPLINKSFNLSYSGHD
                     L"
BASE COUNT          524 a          953 c         1048 g          457 t
ORIGIN      
        1 gatcctgtgc gtcgccgccc gccgtcgaca tgtagatctt gccgtcgggg ccgaagacca
       61 tccgcgacac ggtgcccgag tcgggtagcg tcacgaacaa atcgcgcacg tcgagcagcg
      121 ccttgccgtc ccaacgaccg cgcgcgagcg cgagcgcgcc tttgtcgtcg ggaagggcct
      181 tgtgatacgt gaggtagacg tagccgttag cagcgaagct cggatgcaat gtgacctcga
      241 gcagtcccga gcggcgcaac ggcttcacct cgggcacacc ggcgacgggc gcggggtcga
      301 gcacgccgtt gcgcacgacg cgcaatccgc catgcgtttg agtcacgagc cagacgtcgt
      361 tcggcaggaa cgcgatgctc cacgggtgcg agatgccgcg cgtgaccact gatacgcgga
      421 tcggcattcc ctcggccgtc atgtattcga ccgggtgctc gggcatcgcc gggatcggca
      481 tctcgggcgc gacgggaatg ccgttcgcga acgggacggt ctgttgcgcg tgcgccgcgc
      541 tcgcggcggc gagcagcgtc acgacagcga cgcggcgaat gcggttcatg agactctcct
      601 gtcgatccgt gcgccgggcg cgcgagagtc tcgaatgact cgtgacatcg gcgctctcga
      661 ttgcgtttgt ggaggccgag ccttgcataa tcgccgtcga gcaacaagcg gccggcgcgg
      721 tgaacgcctc cccgcggtcg ccgacaaatg atcagcgcgc gatgggtttc gcgtcggcgg
      781 tgctgaccgc ggccaggata gcggcgagta tgcgattcgg gctcggcggg cagcccggca
      841 ccgcgacgtc gactgggatc acgctgctaa ccgggccggc gctcgcatag ctggtgccga
      901 agatgccgcc cgttgcgcca caatcgccga cggcgacgac gagcttcggg tccggtgtcg
      961 cgtcgtaagt ccgtttgagt gcgagctcca tgttgcgcgc gacggggccg gtcacgagca
     1021 acagatcggc gtggcgtggg ctcgccacga agcggatgcc gagtccctcg aggttataga
     1081 aggcgttatt cagcgcgtga atctcgagct cgcaaccgtt gcaggagcct gcatccacct
     1141 ggcgaatgca tagggcacgg cccagggtgt ccaggatttt tttctggagg tgctcccgca
     1201 cgcgaagctc gtccgcgggc gacggcggcg gttcggtgac gatgcctacg gagccgatct
     1261 gacgcagcgt cttccacata agaggctaga ggtcgtgacc gctgtaggac aggttgaacg
     1321 atttattgat cagcggaaag tcgggcacga tgttgccgat gatcgcatgc tcgagcacgg
     1381 gccaattctg ccaggacgga tcgtgcggat ggcagcgacg aataccgcca ctgtcgcctg
     1441 ccgtgagcgc tacgatcacg ggaccgcgcc acccctcgat cgcgcccacg ccgcattcgc
     1501 cttgcggcgg cgtcgaaacg gcgttcaaaa ggctgcccga cggtgcacga gccacgatcg
     1561 ccgcaacgag acgaaccgat tccgagagct cgtcgaagcg caccgcgact cgcgctgcga
     1621 cgtcgcctgc acgacgcatg gcggtgcgga ctgcaagctc cgtgtacggt tcgcaaggaa
     1681 ggtcgacacg cagatccttg ctctggccgc tggctcgtgc ggcgagaccg acgaggccga
     1741 gccggacagc gagatcgggc gtgacgatgc cggtgccgac gaaccggtcg cggacgccgg
     1801 cgtgctcgtc gaagatgtcc cgaacggccg cggcatcctt ctcgacatca cgcgcgcacg
     1861 ccacgagcgc ctctaggtct tcgggcctgg ggtcgttggc aacgccaccc ggaaccacga
     1921 agtcgagcag gtagcgttga ccgaaagcgg cgtgcgtcgc gcgtagccac aattctttga
     1981 gacgcgagag ctgtgcgagg gcaaacgcaa atccggcgtc gttgccgagc gcgcccaggt
     2041 caccgagatg gttggcgatg cgctcgcttt cgagcgccaa ggcgcggagc catacagcgc
     2101 gcggcggcgg cgcgctgtgt gtcattccct cgagcgcctg acagtacgcc caggaaaatg
     2161 caactgcgga atcgccggaa actcgcgcgg cgagtcgatg gccctcgagc aacggcatgc
     2221 gggcgaaccg ctgctcgatg cccttgtgga cgtagcccag gcgttcctcg agcttcagga
     2281 ccttttcgcc gacgacggag aagcgaaagt gaccgggctc gatcacgccg gcatgcacgg
     2341 gccccacggg tatctcgtgc acaccatcgc cggcgacgcg cacgaacacg tagtcgtcgg
     2401 cccaaagctc gcgcggcggg ctgggtgccg cgcccgcgac gagtggccga tagtcggcgg
     2461 gccaggctgc gtgtcggagc caaggtcgcg aatcggagtc ctccgcgcgc acgcctgtca
     2521 gatcggcggc ggccctttgc atgcgattcg ctgacgggaa gatgtgcgac aagcccgggt
     2581 agacgggctc ggcgtcgggc agcggcagcg tcacggccaa cagaaacccg tcgccgtcga
     2641 acacagcgcg gaccgcgcag gggtcgagct cggtccagag tgcctgaagg cgcgctccac
     2701 ccgcggcgag gtcgagcgcg gcctgtcgcc agccgtccgc gtcgacaccg atctcgcggg
     2761 cgccgggtgc gccgcggagc gctcgggatg agtccagcca gttgcgcagc gtcatagtgt
     2821 gattctgaag cctattggcc ggccaaaagc gctgcagccg tccggtacca gtcggccaag
     2881 tatggcggaa tgaagacgcc gagcagcaag acgatggcga gatgtgcgaa cacgggcagc
     2941 agggccggag aatgcggcag gcgacgcgcg gtcgtctcgc cg
//
LOCUS       DATCUD010000021         1673 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78341, whole genome shotgun sequence.
ACCESSION   DATCUD010000021 DATCUD010000000
VERSION     DATCUD010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78341"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1015)
                     /locus_tag="VIQ99_00360"
     CDS             complement(<1..1015)
                     /locus_tag="VIQ99_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015095569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY9181615.1"
                     /translation="MKVLDWLVSYRREWLSADVMAGLITAAVVIPKAMAYATVAGLPV
                     QSGLYTAFVPIVIYAVLGSSRVLSVTTTTTIAILTGAELAAVAPNGDPALLLTAAATL
                     ALMVGLLLALASMLRLGFLASFISEPVLAGFKAGIGVVIVLDQVPKLLGVHFPKGTFL
                     QNLVALFQSLPSTSMPTLTLAVAMLVLLLGLKWVVPKVPAPLVTVAAGIAAMALLGLG
                     AYGVETVGEIPRGLPSLTLPDVSLAAQMWPAALGITLMSFTETMAAGRAFAATGDPVM
                     RPNQELLATGLATAGGALLGGMAAGGGTSQTAVNRLAGARSQLAGLITAAATLLTLLF
                     LAPL"
     gene            complement(1061..>1673)
                     /locus_tag="VIQ99_00365"
     CDS             complement(1061..>1673)
                     /locus_tag="VIQ99_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004158797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006797 - polyphosphate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PPK2 family polyphosphate kinase"
                     /protein_id="HEY9181616.1"
                     /translation="QGCYVTSYKQPSSEELDHDFLWRYMRNVPSRGQIGIFNRSYYEE
                     VLVVKVHQEILARQKLHPSLITKKIWEQRYEDISNFEEYLSRNGVVVVKFFLHVSKAE
                     QKRRFMERLDQPEKNWKFSASDVAERGYWSEYQDAYEEAIKNTASEHAPWYVVPADNK
                     WFTRLVVAAAVVDAIAKLKLHYPRIDSVKRQALLAARKKLDAE"
BASE COUNT          309 a          575 c          523 g          266 t
ORIGIN      
        1 tcagcggcgc gagaaacagc aacgtcaaca gcgtggcggc cgctgtgatc aaccccgcga
       61 gctggctccg tgcaccggcc aaccggttca cggccgtttg cgacgtgccg ccgcccgccg
      121 ccatgccgcc gagcaacgcg ccgccggccg tggccaaacc ggtcgcgagc aactcctgat
      181 tcggccgcat gacgggatcg ccggtcgccg cgaacgcgcg ccccgcggcc atcgtctcgg
      241 tgaagctcat cagcgtgatg ccgagcgcgg cgggccacat ctgcgcggcc agcgacacgt
      301 ccggcagagt caggctcggc aagccgcgcg gaatctcccc gaccgtttcg acgccgtagg
      361 cgccgaggcc gagcaacgcc atcgcagcga tgccggccgc cacggtcacg agcggcgcag
      421 gcaccttcgg cacgacccac ttcaagccga gcagcaaaac gagcatcgcg accgcgagcg
      481 tcaacgtcgg catcgaggtg ctcggcaggc tctggaacaa cgcaacgagg ttctgcagga
      541 acgtgccttt cgggaaatgc acgccgagca gcttcggcac ttgatcgagc acgatcacga
      601 cgccgatgcc ggccttgaac ccggccaaga ccggctccga gatgaagctg gccaagaatc
      661 cgaggcgcag catcgaagcg agcgcgagca acaagccgac catcagcgcg agcgttgcag
      721 cggcggtcag cagcagggcc ggatcgccgt tcggcgccac ggccgcgagc tcggcgccgg
      781 tcaggatcgc aatcgtcgtc gtggtcgtga cgctcaagac gcgcgagctg ccgagcacgg
      841 cgtagatcac gatcggcacg aacgccgtgt agaggccgga ctgcaccggc aggcccgcga
      901 ccgtcgcgta cgccatcgct ttcggaatca cgaccgcggc cgtgatcagg ccggccatga
      961 cgtcggcgga gagccattcc cgccggtacg agaccagcca gtcgagaacc ttcatcgcag
     1021 cctgactcct acgcgttcgc agcccgccac acgcctgcgg tcattcggca tcgagcttct
     1081 tgcgagccgc caggagcgcc tggcgtttga ccgagtcgat cctcggataa tggagcttga
     1141 gcttcgcgat cgcgtcgacg accgcggccg cgaccacgag ccgcgtgaac catttgttgt
     1201 cggccggcac cacgtaccac ggcgcgtgtt ccgaggccgt gttcttgatc gcctcttcgt
     1261 acgcatcctg atactcggac cagtagccgc gctcggcaac gtcggacgcc gagaatttcc
     1321 agttcttctc gggttggtcg agccgctcca tgaaccgccg cttctgctcg gccttcgata
     1381 cgtgcaggaa gaatttcacg actacgacgc cgttacggct caggtattcc tcgaaattgc
     1441 tgatgtcctc gtaacgctgc tcccaaatct tcttcgtgat caacgacggg tgcagcttct
     1501 ggcgcgccaa gatctcctgg tgcaccttca ctacgaggac ctcctcgtag tacgagcggt
     1561 tgaagatgcc gatctgaccg cggctcggca cgttacgcat gtagcgccag agaaagtcgt
     1621 gatcgagctc ctcgctcgac ggctgcttgt acgacgtgac gtagcagccc tgg
//
LOCUS       DATCUD010000022         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85464, whole genome shotgun sequence.
ACCESSION   DATCUD010000022 DATCUD010000000
VERSION     DATCUD010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85464"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1915)
                     /gene="ligA"
                     /locus_tag="VIQ99_00370"
     CDS             complement(<1..1915)
                     /gene="ligA"
                     /locus_tag="VIQ99_00370"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEY9181617.1"
                     /translation="MERSRTGASKLESEVRELRRAIEAHNYAYHVLDSPTVPDAEYDR
                     LVRRLQEIEQSHPELVTADSPTQRVGATKLEAFREIRHARPMLSLDNVFNDAELEAFD
                     KRTRERLKALDIAVEHVAYWAEPKLDGVAISLRYENGELVFGATRGDGTTGEDVTHNV
                     RTIHSVPLRLRGSRVPRVFEVRGEVFMPKAGFEELNRRALQRGEKTFVNPRNAAAGSV
                     RQLDPRLAADRPLEVFFYALGEVSDDALQGAREQSEIVKLLRHLGLRTCPEAALVEGV
                     AGCREYYAQIGQRRSSLPYDIDGVVYKVNDLGWQQELGFISKAPRWAIAHKFPAQEEM
                     TVIREVDFQVGRTGALTPVARLEPVFVGGVTVSNATLHNMDEVQRKDVRIGDTVIVRR
                     AGDVIPEVVAVVADRRPADARIVTLPRSCPVCGSDVERGEGEAIARCIGGLYCPAQRK
                     EAIRHFASRRALNIEGFGAKLIDQLVDRGIVETPADLYKLTVEQLTELERLGEKSAQK
                     LMAAIQKSKTTTYARFLYGLGIGNVGEATALALANEFSTFRELLDADEERLQQVADIG
                     PVVAAAIHAFFHEPHNVDVIEALLAAGVHWPMSAPKAARESPLRGKTFVITGTLESMT
                     REEAKARLQALGAK"
BASE COUNT          342 a          636 c          603 g          416 t
ORIGIN      
        1 ccttggctcc taatgcttgc agccgcgcct ttgcctcctc gcgtgtcatc gattcgagag
       61 ttccagtgat cacgaacgtc ttgccgcgca acggcgactc tcgcgctgcc ttcggagctg
      121 acatcggcca atgcacaccc gccgccagca atgcttcgat gacgtcgacg ttgtgtggct
      181 cgtgaaaaaa cgcatggatc gctgccgcta cgaccggtcc aatgtccgcc acttgttgca
      241 gcctttcctc gtcggcatcg agcagctctc gaaacgtact gaattcgttg gcgagcgcca
      301 gggcggttgc ttcgccgacg ttgccaatac cgagcccgta caggaatcgt gcgtaggtcg
      361 tcgtcttgct cttctggatc gcggccatga gtttctgcgc cgacttctcg ccgagtcgct
      421 cgagttcggt caactgctcc accgtcaatt tgtagagatc ggccggtgtc tcgacgatgc
      481 ctcgatcgac caactggtcg atgagcttgg cgccgaaacc ttctatgttc agtgcgcggc
      541 gcgacgcgaa gtggcgaatc gcctctttgc gctgggctgg gcagtaaagg ccgcctatgc
      601 accgagcgat ggcttcgccc tcgccccttt cgacatcgga tccacagact ggacagctgc
      661 gaggcagagt gacgatacgt gcgtcggccg ggcgacggtc cgcgaccaca gccacgacct
      721 cggggatcac atcgcccgct cgtcgaacga tgacggtgtc accgatgcgc acatccttac
      781 gctggacctc gtccatattg tgaagcgtgg cattgctgac cgtgacaccg ccgacgaaca
      841 cgggctcgag tcgtgcaacc ggcgtaaggg cacccgtgcg tccgacctgg aagtccactt
      901 cacggattac ggtcatttct tcctgcgccg ggaatttatg ggcgatggcc cagcggggcg
      961 cttttgagat gaacccgagc tcttgctgcc agccgaggtc gttgaccttg taaacgaccc
     1021 catcgatgtc atacggcagg gacgaacgtc gttggccgat ctgcgcatag tattcgcggc
     1081 aacccgcaac gccctcgacg agagctgcct ccggacaggt ccggagcccg agatgcctca
     1141 gcagcttgac gatctcgctc tgctcgcggg caccctggag cgcgtcgtcg ctgacttcgc
     1201 ccaaggcgta aaagaaaacc tcgagcggtc ggtcggccgc gagtcgtggg tcgagttggc
     1261 gcacgctgcc cgccgccgcg ttgcgcgggt tcacgaaggt cttctcgcct cgctgcaacg
     1321 cgcgccggtt cagctcttcg aaaccggctt tgggcatgaa tacttcgccc cgcacttcga
     1381 aaacccgtgg cacgcgggaa ccgcgcaggc gcagcggcac agagtgaatc gtacgcacgt
     1441 tgtgcgtgac gtcctcgcca gtggtgccgt cccctcgcgt agcgccgaac acgagctctc
     1501 cgttttcgta acggaggctg atcgcgacgc cgtccaactt gggttcggcc cagtaggcca
     1561 cgtgctcgac ggcaatatcg agggctttca ggcgttcgcg cgtgcgtttg tcgaacgcct
     1621 cgagctcggc gtcgttgaag acgttgtcga gcgacaacat cggcctcgcg tgacgaatct
     1681 cccgaaatgc ctcgagcttg gttgcgccga cacgctgcgt cggggaatcc gcggttacga
     1741 gctcggggtg tgattgctcg atctcttgga gccgcctaac cagacggtcg tattcggcat
     1801 cggggaccgt cgggctatct aagacgtgat aggcgtagtt gtgcgcctcg atcgcgcggc
     1861 gcaactcacg cacttcggac tctagcttcg atgcgcccgt tcgtgagcgt tccatgctcc
     1921 gtgtctcagc gtctatcgaa ctgatggcga tattcgatga gctcttcgcg cagataacgt
     1981 tcccgctggc tgctcca
//
LOCUS       DATCUD010000023         2262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49963, whole genome shotgun sequence.
ACCESSION   DATCUD010000023 DATCUD010000000
VERSION     DATCUD010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49963"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..1128
                     /locus_tag="VIQ99_00375"
     CDS             7..1128
                     /locus_tag="VIQ99_00375"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012509850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9181618.1"
                     /translation="MKALALAAAVAACGGSDSYAQNQAVFTTAEVAEFNEPWAMAFLP
                     DGRLLVTEKRGALKLYSIEDVATGDVTGVPAVEYGGQGGFGDVVLHPDFASNGLVYLS
                     YAEPGARGTAGAAVARARLALDATGGGALENLAVIWRQSPKVDGRGHYGHRIAFGPDG
                     FLYVSSGERQKFTPAQDMQANLGKIVRLNDDGSVPADNPFADRGGVAAEIWSLGHRNP
                     LGLAFDAQGQLWNVEMGPRGGDELNLVQRGANYGYPVVSNGDHYSGQTIPDHHTRPEF
                     AAPVVFWNPVISPSSLLFYSGSEFPEWQGDAFIGGLSSTSIVRIEFGPGGTAREAARY
                     RMPNRMRAVEQGPDGAIWALEDGRGGKLLKLTAPTAPSR"
     gene            1207..2244
                     /locus_tag="VIQ99_00380"
     CDS             1207..2244
                     /locus_tag="VIQ99_00380"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181619.1"
                     /translation="MRSSHFVTLLAGTGVAGFAGLAAAHHSQAGIFDSRQTIEVTGVI
                     KSISWRNPHGQILLDVTNPDGTHTEWDAETASIAVMRNRGAEPSAVVVGDRVTLSGAP
                     SVRGRNEILTRSMLLSSGYEFTFGGAQAYFPEGKAGRIVGRATIEADVAEATAKADGI
                     FRVWSTIMSDPAAFPMFKGGYPLTAAGRAGLAQWNPRDNSLLKCGTKGTPLIMISPLP
                     MEFVREGETILLKLEEYDTVRTIHMNPNAVAPAEHTLLGFSRGRFDGKTLVVETDHIA
                     PGYFDHEGTPMSDQIKVVERFTPNADYTRLDYTLTTTDPKNFERPFDLTRYYVWKPEN
                     TVHPYECLDRF"
BASE COUNT          380 a          753 c          772 g          357 t
ORIGIN      
        1 aagcacatga aggcgctcgc cctcgccgcc gcggtggctg cgtgcggcgg atcggactcg
       61 tacgcgcaga accaggcggt tttcacgacc gcggaggtcg ccgagttcaa cgagccgtgg
      121 gcgatggcgt tcttgcccga cgggcggttg ctcgtaaccg agaaacgcgg cgcactgaag
      181 ctctactcga tcgaggacgt cgcgaccggc gacgtgacgg gcgtccccgc cgtcgagtac
      241 ggcggccagg gcgggttcgg cgatgtggtc ctgcaccccg atttcgcctc gaacgggctc
      301 gtgtacttga gctacgcgga gccgggcgcg cgtggcaccg cgggcgcggc ggttgcgcgt
      361 gcgcgcctcg cgctggatgc gaccggcggc ggagccctcg agaatctcgc cgtgatctgg
      421 cgccagagcc cgaaggtcga cggccggggc cactacggcc accgcattgc attcgggccc
      481 gacggcttcc tctatgtcag ctccggtgag cggcagaagt tcacaccggc acaagacatg
      541 caggcgaacc tcggcaagat tgtgcgtttg aacgacgacg gcagcgtacc cgcggacaat
      601 ccgttcgcgg accgcggcgg cgtggcggcc gagatctggt cgctcggcca ccgcaacccg
      661 ctcgggctcg cgttcgatgc gcaagggcag ctctggaacg tcgagatggg cccgcgcggc
      721 ggcgacgagc tgaatctcgt gcagcgcggc gcgaactatg gctacccggt cgtcagcaac
      781 ggcgatcact acagcggcca gacgatcccg gatcaccaca cgcggcccga attcgcggcc
      841 cctgtggtgt tctggaatcc cgtgatctcg ccttcgagcc tgctgttcta cagcggcagc
      901 gagtttccgg agtggcaggg cgacgcgttc atcggcgggt tgtcctcgac gtcgatcgtg
      961 cggatcgagt tcggcccggg cggcacggcg cgcgaggccg ctcgctaccg catgccgaac
     1021 cggatgcgtg cggtcgagca gggccccgac ggcgcgatct gggcgctcga ggacggccgc
     1081 ggcgggaagc tgctgaagct cacggcgccg acggcgccga gccgctaacg ctttggtgag
     1141 attgtcggtt tagaatcgag gcattgacgg cgcccataga tgcgccgcgt cacaaagggg
     1201 agccgtatgc gttcgtcgca cttcgtcacg ctgttggccg gcaccggcgt cgccggattc
     1261 gcgggcctcg ctgccgcgca tcacagccag gccggcatct tcgactcacg ccagacgatc
     1321 gaggtcacgg gcgtcatcaa gtcgatctcc tggcgtaatc cgcatggcca aatcctgctc
     1381 gatgtgacca accccgacgg tacgcatacc gagtgggacg cagagacggc ctcgattgca
     1441 gtcatgcgca atcgcggtgc ggaaccgagc gcggtcgtcg tcggcgatcg cgtgacgctc
     1501 tccggtgcgc cgtccgtgcg cggccgcaac gagatcctca cccgcagcat gctgctgtcc
     1561 tccggctacg agttcacgtt cggcggcgcg caggcgtact tccccgaagg caaggccggc
     1621 cgaatcgtcg gccgcgcgac gatcgaagcc gacgtcgccg aggcgacggc gaaggcggac
     1681 ggcatcttcc gcgtgtggtc cacgatcatg agcgatcccg ccgcgttccc gatgttcaag
     1741 ggcggctatc cgctgacggc cgcgggccgc gccgggctcg cgcagtggaa cccgcgcgac
     1801 aactcattgc tgaagtgcgg cacgaagggc acgccgttga tcatgatctc gccgttgccg
     1861 atggagttcg tgcgtgaagg cgagaccatc ctgctcaagc tcgaggagta cgacacggtc
     1921 cgcacgattc acatgaaccc gaacgccgtg gcgccggcgg agcacaccct gctcgggttc
     1981 tcgcgcgggc gcttcgacgg caagacgctc gtcgtcgaaa cggatcacat cgcgccgggc
     2041 tacttcgatc acgaaggtac gccgatgagc gatcagatca aggtggtcga gcggttcacg
     2101 ccgaacgccg actacacgcg cctcgactac acgctgacga cgacggaccc gaagaacttc
     2161 gagcggccgt tcgatctcac gcgctactac gtctggaagc ccgagaacac tgtccacccg
     2221 tacgagtgcc tcgatcgctt ctaaagtagc cgcgcgccgc tg
//
LOCUS       DATCUD010000024         1540 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21562, whole genome shotgun sequence.
ACCESSION   DATCUD010000024 DATCUD010000000
VERSION     DATCUD010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1540
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21562"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VIQ99_00385"
     CDS             <1..384
                     /locus_tag="VIQ99_00385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-bladed beta-propeller"
                     /protein_id="HEY9181620.1"
                     /translation="NRRIQVTDTEGKVLKIVTIDVPAPPNAPVATGNRPPATGGPRQQ
                     EPGSPWAICITPGPNQVLYVSDAYPGRIYKMSLEGEVLGYFGGVGKTAGKFGWIHELA
                     CPSENELYVAELLNWRAQKLVLHPR"
     gene            381..932
                     /locus_tag="VIQ99_00390"
     CDS             381..932
                     /locus_tag="VIQ99_00390"
                     /inference="COORDINATES: protein motif:HMM:NF015957.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0080135 - regulation of cellular response
                     to stress [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEY9181621.1"
                     /translation="MNTTITVELGGKRFTLDEPAYRALRSYLDRASARLGGHPDKAEV
                     LAGLERSIATKLERRAPAGGVCDEPVLTAALGEVGRVDGPDLGRPEDDEPEPSAASYD
                     TPWRTRRLYRLRDGKIAGVCAGLAAFAEIDVGIVRLLFIVAALFSFGLLLAVYVVLMF
                     VLPVAHTDEEIAAAHGGRRGQLL"
     gene            complement(929..1315)
                     /locus_tag="VIQ99_00395"
     CDS             complement(929..1315)
                     /locus_tag="VIQ99_00395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181622.1"
                     /translation="MVAQIRWLRVVILAFLVEAGLLVTALPFVPLLGERVTFTIVVPI
                     ACAIVPFVIVFFGTRKLESGHVPNAFWIGVIAMVMYFALVVTASSIPEAAASYGVPLF
                     VGVNAIRFVSCLAGGHAASRARRRAV"
     gene            complement(1282..>1540)
                     /locus_tag="VIQ99_00400"
     CDS             complement(1282..>1540)
                     /locus_tag="VIQ99_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007871285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9181623.1"
                     /translation="GNAVADFLRGKAEDPCGAFVRSYPKFRTKRLLRWTFDRFQTDFA
                     FNWLLATRPMRAAASVVYFHHKGVFDAEGQPWSRKSAGYES"
BASE COUNT          266 a          523 c          523 g          228 t
ORIGIN      
        1 aaccgccgca ttcaggtcac cgacaccgag ggcaaggtgc tcaagatcgt gacgatcgac
       61 gtgcctgcgc cgccgaacgc gcccgtcgcg accggcaatc gtccgcccgc gaccggcggg
      121 ccgcggcagc aggagcccgg ctcgccgtgg gctatctgca tcacgcccgg gccgaaccaa
      181 gtgctgtatg tgtcggacgc gtacccgggc cgcatctaca agatgtcgct cgagggcgag
      241 gtgctcgggt atttcggcgg cgtcggcaaa accgccggca agttcggctg gattcacgag
      301 ctcgcgtgcc cgagcgagaa cgagctctac gtcgccgagc tactgaactg gcgcgcgcaa
      361 aagctcgtgc tgcatccgcg atgaacacca ccatcaccgt agagctcggc ggcaagcgct
      421 tcacgctcga cgaacccgcg taccgtgcgt tgcgctcgta tctcgaccgc gcgtcggcgc
      481 ggctcggggg ccatccggac aaagccgagg tgctcgcggg gctcgagcgc tcgatcgcaa
      541 cgaagctcga gcggcgggcg ccggcgggcg gtgtgtgcga cgagcccgtg ctgacggccg
      601 cactcggcga ggtcggacgc gtcgacggtc ctgatctcgg ccggcccgag gacgacgagc
      661 ccgagccctc cgccgcgagc tacgacaccc cgtggcgaac gcggcgcctc taccgactgc
      721 gagatggcaa gatcgccggc gtgtgtgccg ggctcgccgc gttcgcggag atcgatgtcg
      781 gcatcgttcg gctgctattc atcgtcgccg cgctgttctc gttcgggttg ctgctcgccg
      841 tctacgtggt gctgatgttc gtgctaccgg tcgcgcacac cgacgaggag atcgcggccg
      901 cacacggcgg ccgtcgtgga cagctgctct agactgcgcg cctgcgcgcg cggctcgcgg
      961 catgaccgcc ggcgaggcac gagacgaatc gaatggcgtt gacgccgacg aacagcggaa
     1021 ccccatagct ggccgccgcc tccggtatcg acgaggcggt gaccacgagc gcgaaataca
     1081 tcaccatggc tatgacgccg atccagaagg cgttcggcac gtggccgctc tcgagcttgc
     1141 gcgtgccgaa gaacacgatc acgaacggca cgatcgcgca cgcgatcggc acgacgatcg
     1201 tgaacgtcac tcgctcgccg agcagcggta cgaacggcag cgccgtcacg agcaacccgg
     1261 cctcgacgag gaacgcgagg atcacgactc gtagccagcg gatttgcgcg accatggttg
     1321 cccctcggcg tcgaacacgc ctttgtggtg gaagtacacg acgcttgccg ccgctcgcat
     1381 cggacgcgtc gcgagcagcc agttgaacgc gaagtcggtc tggaaccgat cgaacgtcca
     1441 ccgcagcaaa cgtttggtgc ggaacttcgg gtacgagcgc acgaacgctc cgcacgggtc
     1501 ctcggctttg ccgcgcagga agtcggcgac cgcgttgccg
//
LOCUS       DATCUD010000025         1506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7350, whole genome shotgun sequence.
ACCESSION   DATCUD010000025 DATCUD010000000
VERSION     DATCUD010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7350"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..>1506
                     /locus_tag="VIQ99_00405"
     CDS             76..>1506
                     /locus_tag="VIQ99_00405"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008951328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase subunit B"
                     /protein_id="HEY9181624.1"
                     /translation="MKKPLLLTELVLRDAHQSLLATRLRIEDMLPIAEKLDAVGFWSV
                     ESWGGATFDACIRYLGEDPWERLRQLKNAMPRTRQQMLLRGQNLLGYRHYADDVVEAF
                     VERAAETGVDVFRIFDALNDIRNLETAVKATLRMRKHAQGTISYTVSPVHTVDLYVDM
                     GKRIEDLGVDSICIKDMAGLLRPYVAFELVSRLKETCRVPIAMQSHATTGMSTTTNIK
                     AAEAGIDMLDTAISSMSMTYGHSATESVVAILEGTDRATGLDLSLLDEIAEYFRDVRK
                     KYAEFEGSLKGVDARILLAQVPGGMLTNMEKQLRDQGASARFDEVLKEIPRVREDLGM
                     IPLVTPTSQIVGTQAVMNVVLGERYKTITKETRGVLTGEYGETPLPVNADLRQRALEG
                     RPPITCRPADLLEPELDRLTAELEGLAAKKGFKTRGRDDVLTYALFPDIGLRFLEHRG
                     DPSKFEPAPGTARAKAAPAPAVAAPPA"
BASE COUNT          276 a          495 c          505 g          230 t
ORIGIN      
        1 agctcgcgac cgtgatcggt gccgctgtca aggcccatcg cgaccgccac gcgggccggt
       61 agactcgggg cgccgatgaa gaagccgctg ctgctgaccg agctcgtgct ccgagatgcg
      121 catcagtcgc tgctcgcgac ccggctgcgg atcgaggaca tgctgccgat cgccgagaag
      181 ctcgatgccg tcgggttctg gtcggtcgag tcgtggggtg gagccacatt cgatgcctgc
      241 atccgctacc ttggagagga tccctgggag cggctgcggc agctcaagaa cgccatgccg
      301 agaacgcgcc agcagatgct gctgcgcggc cagaatctac tcggttaccg gcactatgcc
      361 gacgacgtcg tcgaggcgtt cgtcgaacgc gcggccgaga ccggcgtcga cgtgttccgg
      421 atcttcgacg cgctgaacga catccgcaat ctcgagaccg ccgtcaaggc gacgctgcgg
      481 atgcgcaagc acgcccaggg cacgatctcg tacaccgtga gccccgtgca caccgtggat
      541 ctgtacgtcg acatgggcaa gcgcatcgag gatctcggcg tcgattcgat ctgcatcaaa
      601 gacatggccg ggctgctccg gccgtatgtc gcgttcgagc tcgtatcgcg attgaaagag
      661 acgtgtcgcg tgccgatcgc aatgcaatcg catgcaacca cgggcatgag cacgacgacg
      721 aacatcaagg ccgccgaggc cggcatcgac atgctcgata ccgcgatctc gtcgatgagc
      781 atgacgtacg gccactccgc gaccgagtcc gtcgtcgcga tcctcgaagg tacggaccgc
      841 gccacgggtc tcgacctctc gctgctcgac gaaatcgcgg agtacttccg cgacgttcgc
      901 aagaagtatg cggagttcga aggcagcctg aagggagtcg atgcgcggat tctgctcgcg
      961 caagtgccgg gcgggatgct cacgaacatg gagaagcagc tgcgcgatca aggcgcgtcg
     1021 gcacgcttcg acgaggtgct gaaagagatt ccgcgcgtgc gcgaggatct gggcatgata
     1081 ccgctcgtga cgccgacgtc gcagatcgtc gggacgcagg ccgtgatgaa cgtcgtgctc
     1141 ggcgagcgct acaagaccat cacgaaggaa acgcgcggcg tgttgacggg cgagtacggc
     1201 gagactccgc tgcccgtgaa cgccgacctc cggcaacgcg cgctcgaggg ccggccgccg
     1261 atcacctgcc ggcccgcgga tctgctcgag cccgagctcg acaggctcac ggccgagctc
     1321 gagggcctcg cggcgaagaa aggtttcaag acgcgcggcc gcgacgacgt gctgacgtat
     1381 gcgctgttcc ccgacatcgg cttgcgcttc ctcgagcacc gcggcgaccc gagcaagttc
     1441 gagccggcgc ccggcaccgc gcgcgccaag gccgcaccgg cccctgccgt cgcggcgccg
     1501 ccggct
//
LOCUS       DATCUD010000026         1833 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14467, whole genome shotgun sequence.
ACCESSION   DATCUD010000026 DATCUD010000000
VERSION     DATCUD010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1833)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14467"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VIQ99_00410"
     CDS             <1..759
                     /locus_tag="VIQ99_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HEY9181625.1"
                     /translation="RGVAFDIEIRRGAGAYICGEESAMIESIEGKRGLPRNRPPYIAE
                     VGIFGRPTLNQNVETLWWIRDILEKGPEWFAKQGREGHPGPRSWSVSGRVKKPGVVQA
                     PAGVTVRELIDDYCGGMLDGHEFTAYLPGGASGGILPASMGDIPLDFGGELAKIGAFV
                     GSHAIVVFSDHDDVKGAVVNLLKFFKHESCGQCTPCREGTDKMVALLEAKGAMDELAL
                     RDLETVMRDSSICGLGQAAPNPVNHLLTLFRKGS"
     gene            761..>1833
                     /locus_tag="VIQ99_00415"
     CDS             761..>1833
                     /locus_tag="VIQ99_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009211230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9181626.1"
                     /translation="MTDRIVFMLDGKQVAAAPGETIWDVAKREGTKIPHLCHVDLPGY
                     RVDGNCRACMVEIKGERVLTASCIRKPTPGMDVQTQSERAKKSRGMVFELLASNMRPR
                     EQGPDNQAPFWQWASSMGIAGSSRYASKFDGEHDKAELDLSNPAIAVNLDACIACGAC
                     VRACREVQVNDVIGMGLRGSHAVPVFDIRDPMGLSTCVTCDECVQACPTGALYEKSLM
                     DETATKRAVQKFDKVVNTLCPFCGVGCQTAVAVKDNRIVQVDGRNGYANENRLCVKGR
                     FGYDYVTSPERLTKPLIRRDDAPKTAEPSTMRYEDRFSVFREATWEEALTRAAKGLKT
                     ILDERGGKALSGFGSAKGSNEEA"
BASE COUNT          341 a          548 c          637 g          307 t
ORIGIN      
        1 cgcggcgtcg cgttcgacat cgagatccgc cgcggcgcgg gcgcctacat ctgcggcgaa
       61 gagagcgcga tgatcgagag catcgagggc aagcgcggcc tgccgcggaa tcgcccgccg
      121 tatatcgccg aggtcggtat cttcggccgc ccgacgctga atcaaaacgt cgagactctt
      181 tggtggattc gcgacattct cgagaagggg cccgagtggt ttgcaaagca aggacgcgag
      241 ggccatcccg gcccgcgctc gtggtccgtg tcggggcgcg tcaagaagcc cggcgtcgtg
      301 caagcaccgg ccggcgtgac ggtccgcgag ctgatcgacg attactgcgg cggcatgctc
      361 gacgggcacg agttcacggc ctacctgccc ggcggcgcgt cgggtgggat cctgccggcg
      421 tcgatgggcg atatcccgct cgatttcggc ggcgagctcg cgaagatagg cgcattcgtc
      481 ggctcgcacg cgatcgtggt gttctcggac catgacgacg tgaaaggtgc cgtggtcaat
      541 ctgttgaagt tcttcaagca cgaaagttgt ggccagtgca cgccttgccg cgaaggcacg
      601 gataaaatgg tcgcgctgct cgaggccaaa ggcgcgatgg acgagctcgc gttgcgcgac
      661 ctggagaccg tcatgcgcga ctcgtcgatc tgcggcctcg gtcaggcggc accgaacccc
      721 gtgaaccatc tgctgacgtt gttccggaag ggctcgtgag atgacggatc gaatcgtatt
      781 catgctcgac ggcaagcagg ttgccgccgc ccccggtgaa acgatctggg acgttgcgaa
      841 acgcgagggg acgaagatcc cgcacctgtg tcacgtcgat ctgccgggtt accgcgtcga
      901 cggcaattgc cgcgcctgca tggtggaaat caaaggcgag cgtgtgttga cggcgtcctg
      961 catccgcaag ccgacgcccg gcatggacgt gcagacgcaa tccgagcgtg cgaaaaagtc
     1021 gcgcggaatg gtcttcgagc ttctcgcgag caacatgcgt ccgcgcgagc aggggccgga
     1081 caatcaggcg ccgttctggc aatgggcgtc gtcgatggga attgccggca gctcgcggta
     1141 cgcgtcgaag ttcgatggcg agcacgacaa agccgagctg gacctgtcga atcccgcgat
     1201 cgccgtgaat ctcgacgcat gcatcgcgtg cggcgcgtgc gtgcgcgcgt gccgagaggt
     1261 tcaggtcaac gacgtgatcg gcatgggtct tcgcggcagc catgcggtgc ctgtgttcga
     1321 cattcgcgac ccgatggggc tctcgacctg cgtcacctgt gacgagtgcg tgcaggcgtg
     1381 tccgaccggc gcgctgtacg agaagtcgct gatggacgag acggcaacga agcgcgccgt
     1441 gcagaaattc gacaaggtcg tgaacacgct gtgcccgttc tgcggcgtcg gctgccagac
     1501 tgcggtggcc gtcaaggaca accgcatcgt gcaggtcgac ggccgcaacg gctacgcgaa
     1561 cgagaaccgg ctgtgcgtca aaggtcgttt cggttacgac tacgtgactt cgcccgagcg
     1621 gctcacgaag ccgttgatcc ggcgcgacga cgcgccgaag accgcagaac cttccacgat
     1681 gcgctacgag gaccgtttca gcgttttccg cgaagccacg tgggaagaag cgctgacgcg
     1741 cgcggccaag ggcctgaaga caatactcga cgagcgtggt ggcaaggcgc tatccggctt
     1801 cggctcggcg aaagggtcga acgaggaggc cta
//
LOCUS       DATCUD010000027         1726 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14488, whole genome shotgun sequence.
ACCESSION   DATCUD010000027 DATCUD010000000
VERSION     DATCUD010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14488"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(167..733)
                     /gene="gspH"
                     /locus_tag="VIQ99_00420"
     CDS             complement(167..733)
                     /gene="gspH"
                     /locus_tag="VIQ99_00420"
                     /inference="COORDINATES: protein motif:HMM:TIGR01708.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HEY9181627.1"
                     /translation="MPTSVTGTSEYAVTRTAQRGFSFLELLVVVAIIGLLAAAVSWSI
                     GALGSDRELADETTRLRGMLTLLHEESLMQGRDYGVMFTETGYRFYVYDYQQLAWVEP
                     QGDELLVQHSLRPQLLISLLLDGREVRLDDNFESRDVDTPEPQIMLLASGEVTPFTIE
                     VARDGVDGRFELTAQLDGKITVAEEDFD"
     gene            complement(705..1142)
                     /gene="gspG"
                     /locus_tag="VIQ99_00425"
     CDS             complement(705..1142)
                     /gene="gspG"
                     /locus_tag="VIQ99_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017002223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HEY9181628.1"
                     /translation="MRVIRTPLRVVEQGFTLLEIMVVVVIIGLLVAIVAPNFMGQIDT
                     AAVNRAKADIRGIEAALNLYRLDNFRYPSTLEGLQALVTHPGEASAPNWHQQLERLPR
                     DPWDQPYQYANPGQHGAFDVFSYGADRQEGGEGINADIGNWDL"
     gene            1216..>1726
                     /gene="rrtA"
                     /locus_tag="VIQ99_00430"
     CDS             1216..>1726
                     /gene="rrtA"
                     /locus_tag="VIQ99_00430"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhombosortase"
                     /protein_id="HEY9181629.1"
                     /translation="MSPDRILQRTGVTKRRLMDWVPILAMLVTCFLLAFGDDEVRRLG
                     RYDRVALESGEYWRLLSGHFVHLSWMHLWPNLAALAVIGALFQDVFRASDWVLAGLVS
                     AAAIDAGLYVLDPEVQWYVGLSGVLHGFVAAGAIEWILRRQAIGWVLAVGLTGKLVYE
                     QTVGAMPFSV"
BASE COUNT          322 a          541 c          531 g          332 t
ORIGIN      
        1 cttgttcgtc gcgatccaac tcgcgagcgt cttctcttcc acataggtgg ccgcaacgac
       61 gtaccgattg atctgggtgc tgaccgccat catcccgaac gcaacgatca cgagcgcgac
      121 catcgcctcg atcaacgtga acccggagca gcgtgagcgg ctggcgttaa tcgaagtctt
      181 cctcggctac ggtgatcttg ccgtcgagct gcgccgtgag ctcgaaacgc ccatcgacgc
      241 cgtctcgcgc cacctcgatc gtgaatgggg tcacttcgcc gctcgcaagc aacatgatct
      301 gcggctcggg agtgtccaca tcccgcgact cgaagttgtc gtcgagccgc acctcccggc
      361 cgtcgagtag caaggagatc agcaactgcg gccgcaggga gtgctgcacc agcaactcgt
      421 cgccttgcgg ctccacccag gcgagctgtt gatagtcgta aacatagaat cgataaccgg
      481 tttccgtgaa catgacgccg tagtcgcggc cctgcatcaa cgactcctcg tgcagcaagg
      541 tcagcatgcc gcgaaggcgc gtcgtctcgt ccgcgagctc gcgatcgctg ccgagcgcgc
      601 cgatcgacca cgacacggcc gcggcgagca ggccgataat ggcgacgacg acgagtagct
      661 cgagaaacga gaaaccgcgt tgcgcggtgc gcgtgacggc gtactcagag gtcccagtta
      721 ccgatgtcgg cattgatacc ttcaccgcct tcctggcgat cggcgccata ggagaacacg
      781 tcgaaggcgc cgtgctgtcc cggattcgcg tactggtagg gctgatccca cgggtccctc
      841 ggcaaccgct cgagctgctg atgccagttc ggcgcactcg cttcacccgg atgagtcacg
      901 agagcctgga gtccttccaa ggtgctcggg tagcgaaagt tatccagccg atagagattc
      961 agcgcagctt cgatgccacg gatatccgct ttcgcacgat tgacggccgc ggtgtcgatc
     1021 tgacccatga aattgggtgc gacaatggcc accagcagcc cgatgatcac gacgacgacc
     1081 atgatttcga gcaacgtgaa gccttgctcg acgacgcgta gcggtgttct gatcacgcgc
     1141 atgcaactac cttcgtgcga cagccaaagt gccgatcaat cggaccgaag ataacacaag
     1201 aggttcacgg cattgatgag cccggaccgc attctgcaaa ggacgggtgt cacgaaacgg
     1261 cgactcatgg actgggtgcc gatcctcgcg atgctcgtga cttgcttcct gttggcgttc
     1321 ggcgacgacg aggtgcgtcg cctgggacgc tatgaccgcg tagccctgga aagcggcgaa
     1381 tactggcgtc tcctttccgg ccatttcgtg cacctgagct ggatgcactt gtggcccaat
     1441 ctcgcggcct tggccgtgat cggcgcattg ttccaagacg tcttccgcgc atcggattgg
     1501 gtgctcgccg ggctcgtgtc cgcggctgcg atcgatgccg gtctctacgt gctcgatccc
     1561 gaagtgcagt ggtacgtggg cctgtcgggc gtgctgcacg gcttcgtcgc ggccggcgcc
     1621 atcgaatgga tcctgcgccg ccaagcgatc ggatgggtgc tcgcggtcgg gctcacgggc
     1681 aagctggtct atgagcaaac ggtcggcgcc atgcctttca gcgtcg
//
LOCUS       DATCUD010000028         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85498, whole genome shotgun sequence.
ACCESSION   DATCUD010000028 DATCUD010000000
VERSION     DATCUD010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85498"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..288)
                     /locus_tag="VIQ99_00435"
     CDS             complement(<1..288)
                     /locus_tag="VIQ99_00435"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9181630.1"
                     /translation="MNRSTWVRAAAVALLAIPAASLMAQGTLERIKDRGEFRIGYNPD
                     SRPLSFTQNGEAAGYSVDLCRRIAAGVREHLKLPDMKVTFVATSFTDRFDAI"
     gene            585..887
                     /locus_tag="VIQ99_00440"
     CDS             585..887
                     /locus_tag="VIQ99_00440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181631.1"
                     /translation="MFRKDGTFVRELLVAPRTRGGGSVWDIAFSKDSEQKYLYLADGG
                     NERVCVTERESLDVLTSFGDGGRQPGSSSACTVSQPTRAATSIRRRRSKESACRDS"
     gene            1032..1970
                     /locus_tag="VIQ99_00445"
     CDS             1032..1970
                     /locus_tag="VIQ99_00445"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HEY9181632.1"
                     /translation="MSSAVLGQPKHTHWEPYKNSAAQPSVDQKLADPILVGAIDLHAH
                     YGPDAYPRQWDAFEIAKLAQERGLRAIVLKNHFTETAGLAYLVRKYGAQDIEVFGAVT
                     LDTPVGGVNPQAVRYMVDVTGGWGRIVWLPTHDSEHEVAYNKDDRRSVAVSQDGALLP
                     DVLEVLDLVAEHELTLATGHVTPEETIMILEEARKRGITRSIVTHPLLDPQFTFMTVP
                     QLRAATELGAIVEITAGSLYREGPGRGRVLEALRALGPEDFFVASDSGLVGTPNHTDA
                     LVMAARVLRQNGFDENALDAMFKHNPARLLGLKELR"
     gene            1967..>2169
                     /locus_tag="VIQ99_00450"
     CDS             1967..>2169
                     /locus_tag="VIQ99_00450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181633.1"
                     /translation="MRTIFVTLAVGSLCMLAGASSAQTGRLFLDEAPLDKAVDFPKEK
                     LAAYFEQMTKEQIGVIRLLEGGQ"
BASE COUNT          374 a          673 c          737 g          385 t
ORIGIN      
        1 gatcgcgtcg aaacggtcgg tgaagctggt cgcaacgaac gtgaccttca tgtcgggcag
       61 cttcaggtgc tcccggacgc cagcggcgat gcggcggcaa aggtcgaccg agtatccggc
      121 cgcttcgccg ttctgcgtga aagacaatgg gcgcgagtcc gggttgtagc cgattcgaaa
      181 ctcgcctctg tccttgatgc gctccagtgt tccctgtgcc atcagtgaag ctgctgggat
      241 agccaggagc gcgacggcag cggcgcgaac ccacgtcgac ctgttcatgc ttgtgtcccc
      301 atcgttgttc taagaagcat ccggggaacg catgatgcgg tccggcgggt gcgccagagt
      361 atgactcagg gtttcccggt gcgacaatcg gcgcgggacg gcggaggggg agcgatgacg
      421 cgccgaatgg cgtttttttt ctttgtctgg ccggcgcgtt cgcggggtgc agtcgctccg
      481 aaggcacggc gcccgacgcg cgcgtcgcgc cgcggttcga ggccgccgag ccgactgcgg
      541 acggcctcat ctatgtctgc gatcgcgtca acgaccggct ccacgtgttc cgcaaggacg
      601 gcacgttcgt ccgcgagctg ctcgtggcgc cgcgcacgcg cgggggcggc tcggtgtggg
      661 acatcgcgtt ctcgaaggac tcggagcaga aatatctcta cctcgccgac ggcggcaacg
      721 agcgggtctg cgtcaccgag cgcgagtcgt tggatgtcct gaccagcttc ggcgacggcg
      781 ggcggcaacc gggcagttct tcggcgtgca cagtatcgca accgactcgc gcggcaacat
      841 ctatacgacg gagacgttcg aaggaaagcg cgtgcagaga ttcgtgaacg tcggcgtgtg
      901 gccggtcgag tcggcgtacc tcggcgtcgt ttggcccgaa gcgcgcaccg actgattcga
      961 agtcgcatgt atactcggct cggggtgcct tcatgaaaat aacaacggcc ctagccgcgg
     1021 tcgtgctttc gatgtcgagc gcagtgctcg gccaaccgaa acacacgcac tgggaaccgt
     1081 acaagaacag cgctgcccag ccgtccgtcg atcagaagct cgcggacccg atcctggtcg
     1141 gcgcaatcga tctgcatgct cactacggtc ccgacgcgta tccgcggcag tgggatgcgt
     1201 tcgagatcgc gaagctcgcg caggagcgcg gcttgcgtgc gatcgtgctc aagaatcact
     1261 tcacggagac ggcgggcctc gcgtatctcg tccgcaagta tggggcgcag gacatcgaag
     1321 tgttcggcgc cgtcacgctc gatacgccgg tcggcggcgt gaacccgcag gcggttcgtt
     1381 acatggtcga cgtgacgggc ggctggggcc gcatcgtctg gctgccgacc cacgattccg
     1441 agcacgaggt cgcgtacaac aaggacgacc ggcgctcggt cgccgtctcg caggacggcg
     1501 cgctgttacc ggacgtgctc gaggtgctcg atcttgtagc cgagcacgag ctcacgctcg
     1561 cgaccggcca cgtcacgccc gaggagacga tcatgatcct cgaggaagcg cgcaaacgcg
     1621 gcatcactcg ctcgatcgtg acgcatccgc tgctggaccc gcagttcacg ttcatgaccg
     1681 tgccgcagct gcgcgcggcc accgagctcg gcgcgatcgt cgagatcact gcgggctcgc
     1741 tgtaccgcga gggcccggga cgcgggcgcg tgctcgaggc tctacgcgcg ctcgggcccg
     1801 aggatttctt cgtcgccagc gacagcggcc tcgtcggcac gccgaaccac accgatgcgc
     1861 tcgtgatggc ggcacgagtg ttgcgccaaa acggtttcga cgagaatgcg ctcgacgcga
     1921 tgttcaagca caaccctgcg cgtttgttgg gactcaagga gctacgatga gaacgatctt
     1981 tgtgacgctt gcagtcggct ctctgtgcat gttggccggc gcttcgtcgg cgcaaaccgg
     2041 ccggctgttt ctcgacgagg cgccgctcga caaggccgtc gattttccga aggagaagct
     2101 cgcggcctac ttcgagcaga tgacgaagga gcagatcggc gtgatccggc tgctcgaagg
     2161 tgggcagta
//
LOCUS       DATCUD010000029         3739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_28699, whole genome shotgun sequence.
ACCESSION   DATCUD010000029 DATCUD010000000
VERSION     DATCUD010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28699"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..811)
                     /locus_tag="VIQ99_00455"
     CDS             complement(74..811)
                     /locus_tag="VIQ99_00455"
                     /EC_number="1.5.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pteridine reductase"
                     /protein_id="HEY9181634.1"
                     /translation="MNGRWALVTGAAKRIGAVIARTLHEAGANVAIHYNRSAADAEQL
                     AGELNRLRAKSAFTVAADMLDIDSVERMAKQVLERTAGKLDILVNNASNFYPTPIGTI
                     TPEQWHDLMSSNLKAPLFLSQALLPALRAARGVIINIVDVHSQRPLRDHPVYGAAKAG
                     LAMLTRSLAKDLGPQVRVNGVSPGAILWPDEGMSDALRAAIVKQTALKRSGEPEDIAR
                     TVLFLVRDAPYITGQIIAVDGGRSVGW"
     gene            889..2049
                     /locus_tag="VIQ99_00460"
     CDS             889..2049
                     /locus_tag="VIQ99_00460"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY9181635.1"
                     /translation="MIPTTTAALLPRPSDEALQVSAALAAEIGREIDLSGGWLDFARY
                     MELALYAPGLGYYSAGSAKLGPAGDFVTAPELSAVLGSALAMTIDAELESLGSSTVLE
                     LGAGSGALAAQLLDGFAKRGRDVRYEILETSADFKERQRRVLARFGDRVRWLERLPET
                     PFVGVVIANEVLDALPVARFVKRRGEALALGVVRDGAGFRWGEGRAVPAVATAVRALE
                     LKLGHALPEGFRSEICLALPAWVHGLAASVERGALLLVDYGLVRTDYYHEQRASGTLI
                     CHYRHRAHDDPFAYPGLQDITAWVDFSACADAAVAAELDVAGFTTQGQYLSSALAALS
                     SDLELVLTSPREQAALKTLVLPGEMGERFKLMLLRKGHAGPALPGRDFRHRL"
     gene            2136..3017
                     /locus_tag="VIQ99_00465"
     CDS             2136..3017
                     /locus_tag="VIQ99_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY9181636.1"
                     /translation="MRARQIVATSLIAVIALVSMDALAQPREPLDAKGIWMLGLGGQA
                     DEHSNDSFLGTFDVGVGRNTWLSLAVGHSSSPDDFADIEADTALVGVDHRFENVGFRL
                     SYEEWGDSGVLETEDWGGVVYFDRERWRIGVGYETRDIAIPFTFTGPLGRVFEGEVDV
                     DGERYGLDARVAFGELWTLYLGMAEYDYSRNLNAIPRIDSLNLLSSSTLTLANSFVDQ
                     DRTLGLERRFGRVSLSVRYATDVSAIDDSEFETYDAAVLFPIGRRADLEISLGHGRSE
                     FFETGLYGGLFFLIYSR"
     gene            complement(2991..>3739)
                     /locus_tag="VIQ99_00470"
     CDS             complement(2991..>3739)
                     /locus_tag="VIQ99_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY9181637.1"
                     /translation="EALRAERVWQETVKALGAERPDVYFTTLRDCSALERVFPEVDAL
                     FGVPQPERWHPEIDTGVHTLMALRAAAALSTSEVVRFAVLTHDLGKGTTPTELLPKHL
                     GHEQRSEELLLALCSRLPVPNRYRDLALLVARHHGVVHKATELKPQTVLRIIMAADGI
                     RQPARFEEFLLACEADARGRKGLEDRTYPQAEQWRVALRAARSVDAGKVRAERNVEGE
                     ALGKALHDERLAAIKAALKSTPLAAVDQEE"
BASE COUNT          556 a         1223 c         1283 g          677 t
ORIGIN      
        1 agcgtggcaa gcggccgcgc cgcgcgccgc aatcgagaac atgggtccgc tcgagtcgct
       61 gcgctgactg cggctaccag ccgacgctgc ggccgccgtc gacggcgatg atctggccgg
      121 tgatgtacgg agcgtcgcgc actaggaaca acaccgtgcg cgcgatgtcc tccggctcgc
      181 cgctgcgttt cagcgccgtt tgcttcacga tcgccgcgcg cagcgcgtcc gacatgcctt
      241 cgtcaggcca gaggatcgca cccggcgaca cgccgttcac gcgaacttgc gggcccaagt
      301 ccttcgcaag agagcgcgtc agcatcgcaa ggcccgcctt cgcggcgcca tagaccggat
      361 ggtcgcgcaa tggccgttgc gagtggacat cgacgatgtt gatgatgaca ccgcgcgcag
      421 cgcgcagcgc gggtaacagg gcctgcgaca ggaacagcgg cgctttcaag ttgctgctca
      481 tgagatcgtg ccactgctcc ggcgtaatcg tgccgatcgg cgtcgggtaa aagttggatg
      541 cgttgttcac gaggatgtcg agcttgcccg ccgtgcgctc gagcacttgc ttcgccattc
      601 gttcgaccga gtcgatgtcg agcatgtcgg cggcaaccgt gaacgcggac ttcgcgcgga
      661 gtcgattcag ctccccggcc agttgctccg cgtcggcggc cgagcggttg taatgaatgg
      721 cgacgttggc gccggcctcg tgcagcgtgc gcgcaatcac ggcgccgatg cgtttcgcgg
      781 cgcccgtgac gagcgcccac cggccgttca aagtcgaatc gttgtcggaa cccgtcaccc
      841 tcgctcccgc gtcgtgcttg cgcacaaggt tacactatcg acaagccgat gattcccact
      901 acgactgccg ctctgctgcc gcgtccgagc gacgaggcat tgcaggtgag tgccgcgctc
      961 gcggccgaga tcggccgcga gatcgatctc tctggcggct ggctcgattt tgcgcgttac
     1021 atggagctcg cgctgtatgc accgggtctc ggctactaca gcgcaggcag cgcgaagctc
     1081 ggtccggccg gcgatttcgt gaccgcgccc gagttgagtg cggtgctcgg cagtgcgctc
     1141 gcgatgacga tcgacgccga gctcgagtct ctcggctctt ccacggtgct cgagctcggc
     1201 gccggcagcg gtgcgctcgc agcgcaactg ctcgatgggt tcgcgaagcg gggtcgcgac
     1261 gtgcggtacg agatcctcga gaccagcgcc gatttcaagg agcggcagcg ccgggtgctt
     1321 gctcggttcg gggaccgcgt gcgctggctc gagcgcctcc ccgagacgcc gttcgtgggt
     1381 gtcgtgatcg cgaacgaggt gctcgacgcg ctaccggtcg cgcgcttcgt gaaacggcgc
     1441 ggtgaggcac tcgcgctcgg cgtggtccgc gacggcgccg gcttccgctg gggcgagggt
     1501 cgcgcggtgc cggcggtcgc cacggcggtc cgagcgctcg agctcaagct cggtcacgcg
     1561 ttgccggagg gctttcgctc ggagatttgt ctcgcgttgc ccgcatgggt gcacgggctc
     1621 gcggccagcg tcgagcgtgg cgcgctgctg ctcgtggatt acggcctcgt gcgcacggac
     1681 tactatcacg agcaacgtgc gagcggcacg ctgatctgcc actaccgtca ccgggcgcac
     1741 gacgatccgt tcgcgtatcc cgggttgcag gacatcacgg cgtgggtcga cttcagcgcc
     1801 tgtgcggacg cggccgtcgc cgcggagctc gacgtcgccg gcttcacgac gcaggggcag
     1861 tatctttcga gcgcgctggc ggcgctgtcg tccgatctcg agctcgtgct cacgtcgcct
     1921 cgcgagcagg ccgcgctgaa aacgctcgtg ctgcccggag aaatgggcga gcgcttcaag
     1981 ttgatgttgc tgcggaaggg tcacgcggga cctgcgctcc cgggccggga cttccgtcat
     2041 cgtctgtagg ccaaaggtgt tcgagccgat cacagaacgc gtcgggcctc gggcgtatga
     2101 tggcaattgg tcgcagatgg ctggggtcgc tgccgatgcg cgctcggcaa atcgtcgcta
     2161 cgtcgctgat cgcggtcatc gcgctcgtgt cgatggacgc gctcgcacag ccacgcgaac
     2221 ccctcgacgc gaagggcatc tggatgctcg ggctcggcgg ccaagcggac gagcattcca
     2281 acgacagctt cctcggcacg ttcgacgtcg gtgtcggccg caacacttgg ctgtcgttgg
     2341 cggtggggca cagctcgtct ccggatgact tcgcagacat cgaggccgac accgcgttgg
     2401 tcggtgtgga ccatcgtttc gagaacgtcg gcttccggct ctcgtatgag gagtggggcg
     2461 attccggcgt gctcgagacc gaggactggg gtggtgtcgt gtacttcgat cgcgaacgtt
     2521 ggcggatcgg tgtcggctat gagacgcgcg acatcgcgat tccgtttaca ttcacggggc
     2581 cgctcgggcg ggtgttcgag ggcgaggtcg acgtcgatgg tgagcgttac gggctcgacg
     2641 cgcgcgtggc gttcggcgag ctctggactc tgtatctcgg gatggccgag tacgactact
     2701 cgcgcaacct gaatgcgata ccgcggatcg acagtctgaa cctgctgagc tcgtcgacgt
     2761 tgacgctcgc gaacagcttc gtcgaccagg accgcacgct tgggctggag cgtcgcttcg
     2821 ggcgtgtctc gttgagcgtt cgttatgcga cggacgtctc cgcaatcgac gactcggagt
     2881 tcgagacgta cgacgcagcc gtgctgtttc cgatcgggcg gcgcgccgat ctcgagatca
     2941 gccttggcca cggccgctcg gagttcttcg agacgggtct gtacggcggg ctattcttcc
     3001 tgatctacag ccgctagcgg cgtcgatttc aacgcagcct tgatcgcggc gagccgctcg
     3061 tcgtgcaacg ctttgccgag cgcctcgccc tccacgttcc gctccgcgcg gacctttccc
     3121 gcatcgacgc tgcgcgcggc gcgcagcgcc acgcgccact gctccgcctg cgggtaggtg
     3181 cggtcctcga gccctttgcg accgcgcgcg tccgcctcgc acgcgagcag aaactcctcg
     3241 aaccgggcag gctgacgaat cccgtctgcc gccatgatga tccggagcac ggtctgcggc
     3301 ttgagctccg tggccttgtg cacgacaccg tgatgccgcg cgacgagcag cgcgaggtct
     3361 cgatagcggt tcggcaccgg caggcgcgag cacagcgcca gcagcagctc ctcggagcgc
     3421 tgctcgtgcc ccaagtgctt cggcagcagc tcggtaggcg tagtcccttt gccgaggtcg
     3481 tgcgtgagca ctgcgaagcg cacgacttca ctcgtcgaca acgcggcggc cgcgcgcagc
     3541 gccatcagcg tatgaacgcc ggtatcgatc tcgggatgcc agcgctccgg ctgcggcacg
     3601 ccgaacaatg cgtcgacctc gggaaacacg cgctcgagcg cgctgcaatc gcgcaacgtc
     3661 gtgaaataga catcgggccg ttccgcgccg agcgccttga cggtttcctg ccacacgcgc
     3721 tccgcgcgca gcgcctcca
//
LOCUS       DATCUD010000030         2377 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85506, whole genome shotgun sequence.
ACCESSION   DATCUD010000030 DATCUD010000000
VERSION     DATCUD010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85506"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1270
                     /gene="ftsZ"
                     /locus_tag="VIQ99_00475"
     CDS             119..1270
                     /gene="ftsZ"
                     /locus_tag="VIQ99_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY9181638.1"
                     /translation="MFELMDGYSQTAVIKVLGIGGGGGNAVAHMVRAGLDGVDFICAN
                     TDSQALKGAKVKTGLQIGCNITKGLGAGANPEVGRQAAMEDRDRIQEVIEGADMLFIT
                     AGLGGGTGTGAAPVVAQLAKEMGILTVAVVTKPFSMEGPKRMRVAEQGIAELGRFVDS
                     LITIPNEKLLSVLGPTTTLLDAFRAANEVLQGAVQGIAELITRPGLINVDFADVRTVM
                     SEMGMAMMGSGVASGQDRARIAAEAAISSPLLEDINLSGANGVLVNVTAGPDLSIGEF
                     QEVGDTVKQFASDDATVVIGTVIDPEMNDEIRVTVVATGLGQAAGMAERPMKVVRRAP
                     PVQKGREPNYTELEKPAVTRKRAVGDGVTGNDSLEDLLDIPAFLRRQAD"
     gene            1424..2332
                     /gene="lpxC"
                     /locus_tag="VIQ99_00480"
     CDS             1424..2332
                     /gene="lpxC"
                     /locus_tag="VIQ99_00480"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015475884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEY9181639.1"
                     /translation="MRQRTLKEAIRASGIGLHSGEKVYMTLRPAPANNGIVFRRLDLP
                     EPVDIPADPLGVTETTLGTTLEHGGGKVATVEHLMSAMAGLGIDNAFVDLTAAEVPIM
                     DGSAAPFVFLLQSAGIQEQAAPKRFIRVRERVEVHEGDKWVRLDPHDGFRVNVEIDFE
                     HPALRKYRQAMTMDFSTQVFLKEISRARTFGFLKDLEGARARERALGANLENAIVMDE
                     YRVINEDGLRFRDEFVRHKVLDALGDLYLLGSSLIGEFSGYKCGHKLNNLLLRAMLAA
                     PQSYEAVVFDDDQKPSPVSYQLATSH"
BASE COUNT          446 a          725 c          811 g          395 t
ORIGIN      
        1 cagagcggaa gcgacggcgt ccaagcttgg gttcagcaat gcattcgaac gcatgagagc
       61 gtggtttcaa aagaacttct agggcttcgc ggtattcacc acttgaggag atcaggaaat
      121 gtttgagcta atggacggat acagccagac cgctgtgatc aaagtgctcg ggatcggggg
      181 tggcggcggc aacgccgtgg cgcacatggt gcgcgcaggt ctcgacggtg tggacttcat
      241 ctgcgccaac acggactcgc aagcgctgaa aggcgcaaag gtgaagacgg gcctgcagat
      301 cggctgcaac atcacgaaag ggctcggcgc cggagccaat cccgaagtgg gccggcaggc
      361 ggccatggag gatcgggacc gcatccagga agtcatcgaa ggcgcggaca tgctgttcat
      421 caccgcgggc ttagggggcg gcaccggaac gggcgccgca ccggtcgtgg cgcagctcgc
      481 gaaggagatg ggcattctga ccgtcgccgt cgtgacgaag ccgttctcga tggaaggacc
      541 gaagcgcatg cgcgtcgcgg agcagggcat cgccgagctc ggcaggttcg tcgattcgtt
      601 gatcacgata ccgaacgaga agctgctgtc cgtgctcggc cccacgacga cgttgctcga
      661 cgcgttccgg gcggccaacg aagtgctaca gggcgccgtg caaggcatcg ccgagctgat
      721 cacgcgaccg ggcctcatca acgtggactt cgcggacgtg cgcaccgtga tgtcggagat
      781 gggcatggcg atgatgggct cgggcgttgc gagcggccag gatcgcgcac gcatcgcggc
      841 cgaagccgcg atttcgagcc cgctgctcga ggacatcaac ctgtcgggtg cgaacggcgt
      901 gctcgtgaac gtgactgccg ggcccgatct ctcgatcggc gagttccagg aagtcggcga
      961 taccgtcaag cagttcgcgt ccgacgatgc gaccgtcgtg atcggcaccg tgatcgaccc
     1021 cgagatgaac gacgagatcc gcgtaacggt cgtcgcgacc ggtctcgggc aggcggcggg
     1081 gatggccgag cggccgatga aggtcgtgcg gcgcgcgccg cccgtgcaga aaggccgcga
     1141 gccgaactac acggagctcg agaagcccgc cgtgacccgc aagcgtgccg tcggcgatgg
     1201 cgtcaccggg aacgacagtc tcgaggatct gctcgacatc ccggcgttcc tgcggcggca
     1261 ggccgattga cccatggaaa tctcgtctgg ttccttgccg gccggaacgg cgctatggta
     1321 gtttcgtcgg ccgctcgggc gtgggccgcc gcgtttttgg cgacaccgcg gctcgaacga
     1381 gcagctgacg gactagcatt cacgtcacgg agctacggat agcgtgcgtc aacgcactct
     1441 gaaagaagcg attcgcgcga gcgggatcgg cctgcattcc ggcgaaaagg tctacatgac
     1501 cctgcggccg gcgccggcca ataacggcat cgtgtttcgg cgtttggact taccggagcc
     1561 cgtcgacatc ccggccgatc cgctcggcgt gacggagacg acgctcggca ccacgctcga
     1621 gcacggtggc ggcaaggtcg ccacggtcga gcatctcatg tccgcgatgg cgggattggg
     1681 catcgacaac gcgttcgtcg acctcacggc cgccgaagtg ccgatcatgg acggcagcgc
     1741 ggccccgttc gtattcctgc tccagtcggc cggcatccag gaacaggccg cgccgaaacg
     1801 cttcatccgc gtgcgcgagc gcgtcgaggt tcacgaaggc gacaaatggg tcaggctcga
     1861 tccgcacgac ggcttccgcg tgaacgtcga gatcgacttc gagcatcccg cgctgcgcaa
     1921 gtatcgccaa gccatgacga tggacttctc cacgcaggtt ttcttgaagg agatcagccg
     1981 tgcccggacg ttcggtttcc tgaaggacct cgaaggtgcg agggcgcgtg agcgagcgct
     2041 cggggccaac ctcgagaacg cgatcgtgat ggacgagtac cgcgtgatca acgaggacgg
     2101 cctgcgtttc cgcgacgagt tcgttcggca caaggtgttg gacgcgcttg gcgatttgta
     2161 cctgctcggc tcgtcgctga tcggcgagtt ctcgggctac aagtgcggcc acaagctcaa
     2221 caacctgctg ctgcgcgcga tgctcgccgc gccgcaatcg tacgaggccg tcgtgttcga
     2281 cgacgatcaa aagccttcgc cggtttcgta tcagctcgcg acgagccact gagcgcgtag
     2341 gcgctcggtc ccacatccct ctcgatcaga ccggatt
//
LOCUS       DATCUD010000031         1941 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_64226, whole genome shotgun sequence.
ACCESSION   DATCUD010000031 DATCUD010000000
VERSION     DATCUD010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64226"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..>1941)
                     /gene="glgP"
                     /locus_tag="VIQ99_00485"
     CDS             complement(121..>1941)
                     /gene="glgP"
                     /locus_tag="VIQ99_00485"
                     /inference="COORDINATES: protein motif:HMM:TIGR02094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEY9181640.1"
                     /translation="VWHINEGHAAFLVLERLREHTTAGLPFAAALEVTAASTVFTTHT
                     PVSAGHDVFPRERVARQFASLLGELDISPDQLLDLGRAPERPDVFNMTRFALRGSAAV
                     NGVSRIHGRVSSRLCASAWPEVPPAENPMGYVTNGVHVATFLRHTWAQLFDRHIGADW
                     RERMTDRAVIARIGAIPDTLFWETNQDVKSQMLRVLRERLTQQYQRNGLSEAHVHRLL
                     KLVDPEKCDVLTIGFGRRFATYKRATLLLADLGWLEQLVSNEDRPVVFVFAGKAHPAD
                     EPAQWMMREIARVAALPPFIGKVLMCEGYDLALGRLLTSGVDVWLNTPVHPFEASGTS
                     GMKAAINGTVNLSVLDGWWAEAYDPHRETRNGWGIPPARDEQGDAERDRYDSTTLYET
                     LQDEVIPLYYARDAKLGYSPEWVRICKRSMVSVLPAFNSERVLHDYLRDFYVPAARHG
                     RLLATDGFKAARELGEWKEKVRTAWPGVALKMLGEPAGEISFAQRVTLEVEVVLNGLE
                     PRDVRVECQVRRVLGSEVAVPVQGYAENRRPKHGVDYREGEPVLLAAFTPGDIGQEGA
                     CRYRLDLQPPWAGTLHYEVRAVPDHPHLSHPYELGLMRRL"
BASE COUNT          322 a          687 c          627 g          305 t
ORIGIN      
        1 gcgtggcccg cgggctatag atgcagaaat tgacgccgcc gtcccgcgtc gaggcgccga
       61 gtggctgccg cgagcccgcg aggatcgcga gcttcgcccg cggattgaac ttccggtcgc
      121 tcaaagcctg cgcatcaacc cgagctcgta cgggtgcgac aggtgcggat ggtcgggtac
      181 ggcccgcacc tcgtaatgca gcgtgccggc ccacgggggc tgcaagtcga gccggtagcg
      241 gcacgcgccc tcctgaccga tatcgccggg cgtgaacgcc gcgagcagca ccggctcccc
      301 ttcgcgatag tcgacgccgt gcttcggccg gcggttctcg gcatacccct ggacgggcac
      361 ggcgacctcc gacccgagca cacgccgcac ctggcattcg acgcgcacgt cgcgcggctc
      421 gagcccgttc agcacgacct cgacctcgag cgttacgcgc tgcgcgaacg agatttcgcc
      481 ggccggttca ccgagcatct tgagcgcaac gccaggccaa gcggtccgca ccttttcctt
      541 ccactcgccg agctcgcgcg cggccttgaa tccgtctgtc gccagcaacc ggccatggcg
      601 cgcagccgga acgtagaagt cacgcagata gtcgtggagc acgcgctcgc tattgaaggc
      661 gggcagcacg ctcaccatcg agcgcttgca gatccgcacc cactcgggcg aatagccgag
      721 cttggcatcg cgcgcgtagt acaacggaat gacttcgtcc tgaagcgtct cgtagagcgt
      781 cgtcgagtcg taacgatcgc gctcggcgtc gccctgctcg tcgcgcgccg gaggtatgcc
      841 ccagccgttg cgcgtttcgc ggtgcggatc ataggcctcg gcccaccagc cgtcgagcac
      901 gctcaagttc actgtgccgt tgatggcggc cttcataccg gacgttccgc tcgcttcgaa
      961 gggatgcacg ggcgtgttga gccaaacgtc gacgcccgac gtcaacagcc ggccgagcgc
     1021 gagatcgtag ccctcgcaca tcaacacctt gccgatgaac ggcggcaagg ccgcgacgcg
     1081 cgcgatctca cgcatcatcc actgcgcggg ctcgtcggcg gggtgcgcct tgccggcgaa
     1141 cacgaacacc acgggccggt cttcgttgct gacgagctgc tcgagccacc ccaagtccgc
     1201 cagcagcagc gtcgcgcgct tgtacgtcgc gaaacggcgc ccgaacccga tcgtcagcac
     1261 gtcgcacttc tcgggatcca cgagcttcag gagccgatgc acgtgcgcct cgctcaagcc
     1321 gttgcgctgg tattgctgcg tcagccgctc acgcaacacg cgcagcattt ggctcttgac
     1381 gtcctggttc gtttcccaga acagcgtgtc ggggatcgcc ccgatgcgcg cgatcaccgc
     1441 gcgatcggtc atgcgctcgc gccagtcggc gccgatgtgg cgatcgaaaa gctgggccca
     1501 cgtgtgccgg agaaacgtcg ccacatgaac gccgttcgtc acgtaaccca tcgggttctc
     1561 ggccggcggc acctcgggcc aagcgctggc gcacaaccgc gacgacacgc ggccgtgaat
     1621 cctgctgacg ccgttgaccg ccgcggaccc gcgcagcgcg aaccgggtca tgttgaacac
     1681 gtccgggcgc tccggagcgc ggcccaagtc gagcagctgg tccggcgaga tatcgagctc
     1741 acccaggagg ctcgcgaact gccgtgccac gcgctcgcgc ggaaatacgt cgtgcccggc
     1801 gctgacgggg gtgtgagtcg tgaacacggt gctcgccgcc gtcacctcca gcgctgccgc
     1861 gaacggcaga cctgccgtcg tgtgctcacg caggcgctcg aggacgagaa aggccgcgtg
     1921 cccttcgttg atgtgccaga c
//
LOCUS       DATCUD010000032         3184 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85529, whole genome shotgun sequence.
ACCESSION   DATCUD010000032 DATCUD010000000
VERSION     DATCUD010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3184
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85529"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VIQ99_00490"
     CDS             complement(<1..514)
                     /locus_tag="VIQ99_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181641.1"
                     /translation="MLTPAEQLGLAGAALDARVRQAVNYIPDSTLVHVARQLAEDARA
                     NDVVYTHDGAVETVRVMLRPLLVMPEQLSYLHHVCARIMGALARVPELYARDPDIRAV
                     LPLAGDERAWLEEVWPDLARSESPLYGRLDAVCDFTSARWQDSLRFMEPNLSGVGGIH
                     MGPLAETLVMR"
     gene            complement(528..1640)
                     /locus_tag="VIQ99_00495"
     CDS             complement(528..1640)
                     /locus_tag="VIQ99_00495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY9181642.1"
                     /translation="MAKKTAGKKAEAGNVGNDDILTTTELVRLAKQRLPEAGWEFIVG
                     GAETETTMIRNRHALDAIAFRPRVLRNVERATPATTFLGMKHRIPVLLAPIASLTDVD
                     PEGALPVARAAAGFGCLMLVSSVTQPSFEAVAKVAGERWGLQLYVDGDEKWVVAMAKR
                     AVQAGAKAICVTADVPTFGRRERHIHRRAAMAGRPFGALREGEAHRARTEWKVVDALK
                     RAVDVPLMLKGVQTAEDADLCVKHGVDIIYVSNHGGRQLDHGRGAIELLPEVVSQARG
                     KAQFVIDGGFVRGTDIMKALARGAAMVGIGKLQALALGAAGERGVARMLEILETELTV
                     NMKLLGANTCDDLDGTCLQPATPVTVPGILSALPLL"
     gene            1837..2811
                     /locus_tag="VIQ99_00500"
     CDS             1837..2811
                     /locus_tag="VIQ99_00500"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9181643.1"
                     /translation="MGLATLGLARPLLAQPAAANRSEPMPGTRLVLLGTRGGPGVGPD
                     RGESASAVVVDGVPYLVDCGYGTMRALTVAGIGYQNVSTIFLTHLHNDHTADLAAFLS
                     HQWTGNKATPTNVYGPYATESTVAGALAFMRADVEIRTIDEGRTVSPEDQFFGHDADV
                     GNEPKRVFADERVIVTAATNTHFPERAVAQMRHRSLGYRFETSTRSIVFSGDTAYSAN
                     IVSLARGADVFVCEVMDHALYEQNMARARADAEAGRENSVARHVAETHSTPMDVGRMA
                     SEAEVGTVVLNHQLRGPAARGWTISAFIDGVRSAFDGPVIVGEDQAVI"
     gene            complement(2828..>3184)
                     /locus_tag="VIQ99_00505"
     CDS             complement(2828..>3184)
                     /locus_tag="VIQ99_00505"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9181644.1"
                     /translation="SADRPEAQAFFGIQARNLARLSREGVKIALGTDGNIPWSAHIEM
                     TDMVAAGMTPSEVIVASTSNAAEFMRLADAGTVASGKSADFIVLEANPLDDIANTRRI
                     RDVYLRGERIDRSAYP"
BASE COUNT          522 a         1106 c         1044 g          512 t
ORIGIN      
        1 cgcgcatcac gagcgtttcg gccagcggac ccatgtggat gccgccgacg cccgacaggt
       61 taggctccat gaaacgcagc gagtcttgcc agcgcgcgct ggtgaaatcg cagacggcgt
      121 cgaggcggcc atagagcggg ctctcggacc gcgcgaggtc gggccatacc tcctcgagcc
      181 acgcgcgctc gtcgccggcc agcggcaata ccgcgcgaat gtccgggtcg cgcgcgtaga
      241 gctccgggac tcgcgcgagc gcccccatga tgcgggcgca gacgtgatgc aagtaactca
      301 gctgctcggg catcacgagc aacggacgca acatcacgcg cacggtctcg acagcgccat
      361 cgtgagtgta aacgacgtcg ttggcgcgcg cgtcctcggc gagctgtcgc gctacgtgga
      421 ccagcgtgga atccgggatg tagttgacgg cctggcggac gcgcgcgtcg agcgcggcgc
      481 ccgcgagccc gagctgctcg gcgggagtca acaaggcggg cccagcctca tagcaacggc
      541 agtgcgctca agatcccggg aacggtcacg ggtgtcgcgg gctgcaggca cgtcccgtcg
      601 aggtcgtcac acgtgttcgc gccgagcaac ttcatattca ccgtgagctc ggtctccaag
      661 atctcgagca tcctggccac tccgcgctct ccggccgcac cgagcgccaa ggcctgtagc
      721 ttgccgatcc cgaccatcgc ggcgccacgc gcgagcgcct tcatgatgtc cgtgccgcgc
      781 acgaacccac catcgatcac gaactgtgct ttgccgcgcg cctggctcac gacctccggc
      841 aacagctcga tcgcgccgcg cccgtgatcg agctgccggc cgccgtggtt cgacacgtag
      901 atgatgtcga cgccgtgctt gacgcagagg tccgcgtctt cggcggtttg aacgcccttc
      961 agcatcagcg gcacgtcgac ggcgcgcttc agcgcgtcga cgactttcca ttcggtccga
     1021 gcacgatgcg cctctccttc gcgcagcgcg ccgaacggcc gtcccgccat cgccgcgcga
     1081 cgatgaatgt gacgctcgcg ccggccgaac gtcggcacgt ccgctgtgac acagattgcc
     1141 ttggcgccgg cctgcacggc gcgcttcgcc atcgcgacga cccacttttc gtcgccgtcc
     1201 acgtacagct gcaaccccca ccgctcgccg gcgaccttcg cgacggcttc gaagctcggc
     1261 tgcgtgacgc tactcacgag catcaaacag ccgaacccgg cggctgcgcg tgcgacgggc
     1321 agcgcaccct cggggtcgac atccgtgagg ctcgcgatcg gcgcgagcag cacgggaatc
     1381 cgatgtttca tgccgagaaa tgtcgtggcc ggcgtcgcgc gctcgacgtt gcggagcacg
     1441 cgcggtcgga acgctatcgc atcgagcgcg tgtcgattcc gaatcatcgt cgtttccgtc
     1501 tcggcgccgc cgacgatgaa ctcccacccg gcctcgggca gtcgttgctt cgcgagccgc
     1561 acgagctcgg tcgtcgtcag aatgtcgtcg ttaccgacgt tgccggcctc ggccttcttg
     1621 ccggccgttt tcttcgccat cgcagcgtgt ctccgcgcaa tcgtgactgg tgcgaagttt
     1681 acggtgcggc agcaggctgc gatacctgcg cgccggatgc tcgccaagct cgaagctacc
     1741 acgcttcccg ggtaagatcc gcccgacacg gggatcgaag tgatgacggg acaccgacgc
     1801 tccaggttta gtcggcgcac gctgctcgaa ggcgccatgg gtttggccac actcggcttg
     1861 gcgcgaccat tgctcgcgca gcccgccgcc gcgaaccgct ccgagcccat gcccggcacg
     1921 aggctcgtgt tgctcggcac gcgcggcggc cccggcgtag ggcccgatcg cggcgagagc
     1981 gcaagcgcgg tcgtcgtcga cggcgtgccg tacctcgtcg attgcggcta cggcacgatg
     2041 cgagcgctga cggtggccgg catcggctac cagaacgtca gcacgatatt cctcacgcac
     2101 ttgcacaacg atcacacggc agatctcgcc gcgttcttgt cgcaccaatg gaccggcaac
     2161 aaagccacgc cgacgaacgt ctacggcccc tacgcgaccg agtccacggt ggcgggagca
     2221 cttgcgttca tgcgcgccga cgtcgagatc cgcacgatcg acgaaggccg taccgtttcg
     2281 ccggaggatc aattcttcgg tcacgacgcc gacgtcggca acgagccgaa acgcgtgttc
     2341 gccgacgagc gcgtgatcgt gactgcggcc acgaacacgc acttccccga gcgcgccgtg
     2401 gcgcagatgc ggcatcgctc gctcggctac cggttcgaga ccagcactcg gtcgatcgtg
     2461 ttctccggcg acacggccta ctcggccaat atcgtgagcc tcgcgcgcgg cgccgacgtg
     2521 ttcgtctgcg aggttatgga tcacgcgctg tacgagcaga acatggcgcg ggcgcgcgcg
     2581 gatgccgaag cgggccgcga aaacagcgtc gcgcggcacg tggccgagac gcactccact
     2641 ccgatggacg tagggcgcat ggccagcgag gccgaagtcg gcaccgtcgt gctgaaccat
     2701 cagctgcgcg gcccggcggc gcgcggctgg acgatctcgg cgttcatcga cggcgtccgc
     2761 agtgcattcg atggcccggt catcgtcggc gaagaccaag cagtgatcta ggcgagcgcc
     2821 gcgctcctca aggataggcc gagcgatcga tgcgctcgcc gcgcaggtag acgtcgcgga
     2881 tgcggcgagt gttcgcgatg tcgtcgagcg ggttcgcctc gagcacgatg aagtcggcgc
     2941 tcttgccgga cgctacggtg ccggcgtcag cgagcctcat gaactccgcc gcgttgctcg
     3001 tcgaggccac gatgacctcg gacggcgtca tgccggcggc caccatgtcg gtcatctcga
     3061 tatgcgcgct ccacggtatg ttaccgtcgg tcccgagcgc gatcttgacg ccctcacggg
     3121 acaaccgcgc gaggttgcgt gcctgaattc cgaagaacgc ctgggcctcg ggacgatcgg
     3181 caga
//
LOCUS       DATCUD010000033         2406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78482, whole genome shotgun sequence.
ACCESSION   DATCUD010000033 DATCUD010000000
VERSION     DATCUD010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78482"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..541)
                     /locus_tag="VIQ99_00510"
     CDS             complement(<1..541)
                     /locus_tag="VIQ99_00510"
                     /inference="COORDINATES: protein motif:HMM:NF023580.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3592 domain-containing protein"
                     /protein_id="HEY9181645.1"
                     /translation="MITNENFWIWFGGIWLVVGLAFLGIGGGIGWHSRTLDARFDAEG
                     EPTEGMVLAKEIVSPSDRPQRYTVTFRFTDSRGETVRGSADLDAETWDTLVERGPIEV
                     VYLPASPSAYRVLGQGNANAVLLFVFPLIGAVLAAVGGVIVVNALRKRGIRRELMRSG
                     AIAAGTVFDVGPGSLRINGI"
     gene            complement(579..>2406)
                     /locus_tag="VIQ99_00515"
     CDS             complement(579..>2406)
                     /locus_tag="VIQ99_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181646.1"
                     /translation="EDWWDDSSDDLADLWDEAQNCFSDHVLPGGTVPVRFDIEPAMRV
                     NLSQSGSRGSATGNVTGSVGLGIPMDGDLQAKVDFFYIPCLPFVVRPRSITVTGDLTV
                     GQVIGIQATATGAFNQRYTIPPTGGPRIPIQVIPIIIGGVPVAIIDVSAYIEGEVDVT
                     ANGSVVGTATLSNEHTSTFDFTCDGHGCEAGPGGQPTESTPVTTTQSVQIEGKVTAKP
                     GIYTALMLTLNVNVLGARLGPQPFLEGTAVGCGAATATQTDGDQNAALAADLDWGVGF
                     RAEALVGGKVLPNEYRREITGENHIWFKDLIPGGSSALRAAIAGPTEAATGQATAYKL
                     SLPSCYPYEEDAKYRVTWTGNATPSSTPASACDWQAGRGDCRFDPTRELDVRFAWPAA
                     GNYSLTAAVIGDEHRTFDPAPAAVELAVAVTGEASTTAGSGAGGGAAGPTASGGQRGG
                     TSTAPTVSRTGAAGGSQCCDIVPNAAMRGRLGRVVVAYPEKVSARIDVFRPGETRAVA
                     SGYGDAAFDLFPGTYDVTISGKRVTGVTVRSGNDTKIRVGVLHVTASTGTRVDLVDPA
                     DGRSLTSGYGTGAYGLPIGELGVQIAGQTEAVVIEAGQVTDF"
BASE COUNT          378 a          841 c          787 g          400 t
ORIGIN      
        1 gaataccgtt gatgcgcaga ctgcctggac cgacatcgaa gacggtgccg gccgcgattg
       61 cgccgctgcg catgagctcg cggcggatgc cgcgcttgcg caacgcgttg acgacgatga
      121 ctccgccgac ggcggccagc acggccccga tcagcgggaa cacgaacaga agcacggcgt
      181 tggcgttgcc ttgcccgagc acccgatagg ccgacgggct cgcaggcagg tagacgacct
      241 cgatcggccc gcgctcgacg agcgtgtccc acgtttccgc gtcgaggtcg gccgagccgc
      301 gcacggtctc gccgcgagag tctgtgaagc gaaacgtgac cgtatagcgc tgcgggcgat
      361 cgctcggcga gacgatctct ttggcgagca ccatgccttc ggtgggttcg ccttcggcgt
      421 cgaagcgggc atcgagcgtg cgcgagtgcc agccgatgcc gccaccgatg ccgaggaacg
      481 cgagccccac gacgagccag ataccgccga accagatcca gaagttctcg ttcgtgatca
      541 cgcgtgtcgg cctcagggaa cgcggcaatc gagccgcgtc agaaatcggt gacctgcccg
      601 gcctcgatca cgaccgcttc ggtctggccc gcgatctgca cgccgagctc gccgatcggc
      661 aaaccgtacg cgccggtccc atagccgctc gtcaagcttc ggccgtctgc cggatcgacc
      721 aagtcgacgc gcgtaccggt gctggcggtc acatgcaaca cgccgaccct gatcttcgta
      781 tcgttgccgg agcgcacggt cacgcccgtg actcgcttac ccgagatcgt gacgtcatag
      841 gttccgggaa agagatcgaa cgctgcgtcg ccgtagccgc tggcgacggc ccgcgtttca
      901 cctgggcgaa acacgtcgat gcgcgccgac actttttcgg ggtacgcgac gacgacgcgg
      961 ccgagccgcc cgcgcatggc agcgttcggc acgatgtcgc agcactgcga gcccccggcc
     1021 gcacccgtcc ggctcacggt cggcgccgtc gaggtaccgc cgcgttgccc gccgctcgcc
     1081 gttggcccgg cggcaccgcc gcccgcgccg ctgcccgccg tcgtgctcgc ttctcccgtg
     1141 accgcgacgg cgagctcgac cgccgccggt gcgggatcga acgtccgatg ctcgtcgccg
     1201 atcaccgcgg ccgtcagcga atagttgccg gccgccggcc acgcaaagcg cacgtcgagc
     1261 tcgcgtgtcg gatcgaaccg gcagtcgccg cgtcccgctt gccagtcaca ggcggaggcc
     1321 ggtgtcgacg agggcgtcgc gttgccggtc caggtgacac ggtatttcgc gtcttcctcg
     1381 tacggatagc agctcggcaa gctcagcttg tacgcggtcg cctgtcccgt tgcggcctcg
     1441 gtcgggcctg cgatcgcggc gcggagtgcg ctcgaccccc cggggatcag atccttgaac
     1501 cagatgtggt tctcgccggt gatctctcgg cggtattcgt tggggaggac tttaccgccg
     1561 accagcgctt cggcgcgaaa accgacgccc caatcgaggt cggccgcgag cgcggcgttc
     1621 tggtcgccgt ccgtctgggt ggccgtcgcg gcaccgcatc ccactgcggt gccctcgagg
     1681 aacggctgcg gccccaagcg cgcgccaagc acattgacgt tgagcgtcaa catcagagcc
     1741 gtgtaaatgc ccggcttcgc cgtgaccttg ccctcgatct gcacgctctg cgtggtcgtc
     1801 acgggagtgc tctccgtcgg ctggccgccc ggacccgctt cgcagccgtg gccgtcgcac
     1861 gtgaagtcga acgtcgacgt gtgctcgttg ctgagcgtgg cggtgccaac gacgctgccg
     1921 tttgcggtga catcgacctc gccttcgata tatgcgctga cgtcgatgat cgcgacgggc
     1981 acgccgccga tgatgatcgg aatcacttgg atcggaattc gcggcccgcc cgtcggcgga
     2041 atcgtgtacc tctggttgaa cgcaccggtc gccgtcgcct gaatcccgat cacctggccg
     2101 accgtcaaat cgccggttac cgttatgctg cgcggtcgca cgacgaacgg caggcagggg
     2161 atgtagaaga aatccacttt tgcctgcagg tctccgtcca tcggaatacc caaaccgacg
     2221 ctgccggtga cattgcccgt cgccgacccg cgtgagccgc tctgcgagag gttcaccctc
     2281 atcgccggct cgatgtcgaa gcggacgggc acggtgccgc ccggcaagac atggtccgag
     2341 aagcagttct gcgcctcgtc ccagaggtcc gcgagatcgt ccgaggagtc gtcccaccaa
     2401 tcctcg
//
LOCUS       DATCUD010000034         1641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_64246, whole genome shotgun sequence.
ACCESSION   DATCUD010000034 DATCUD010000000
VERSION     DATCUD010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64246"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            220..933
                     /locus_tag="VIQ99_00520"
     CDS             220..933
                     /locus_tag="VIQ99_00520"
                     /inference="COORDINATES: protein motif:HMM:NF016236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEY9181647.1"
                     /translation="MSAGVVREDVPDRFERLNRGVYKFNRALDKAVVRPIARGYDRVV
                     PAPVDRHTRNFFTNLAAPIDIMNNFLQAKFKPGFSDFGRFLLNTVAGAGFFDPAAKLG
                     LERHPEDFGQTLAVWGVPSGGPLMLPILGMGTVRDWGGWTVDLQGDLLWHNDEDDVKL
                     GLVLWRFTSDRAALLPAEAALEASFDEYAFIRRAYLQRRRYEVYDGAPPEEDLGLDPE
                     SDLELDPELELDPELNLHE"
     gene            926..>1641
                     /locus_tag="VIQ99_00525"
     CDS             926..>1641
                     /locus_tag="VIQ99_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006915345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9181648.1"
                     /translation="MNDSSAADAIVDMRGVEYSIGSRVILSGLDLAVRRGRITAIMGP
                     SGAGKTTLLKLITAQAAPTRGQVLVFGADLATLRRPQVFALRKRMGMLFQNGALLTDL
                     DAFENVAFPLREHTDLSEPLIRALVIAKLNAVGLRGAATMMPAELSGGMARRVALARA
                     IAMDPELLIYDEPFVGLDPISRGVILRLIRQMNDGLGITSIVVSHDVHDLAEIADDGY
                     LISGGKVVAHGTPRELLASGS"
BASE COUNT          260 a          514 c          555 g          312 t
ORIGIN      
        1 gtcgttcgca tacactatcg gcggtttcga tcagctgagc gccgcaaccc gatgggcatg
       61 gaaagatcgg ctattccgca ggtcttttcg tgacgccgga cgcatcttca tgcgcgtgtc
      121 cacggctgaa ttggcggacc atagttgggc gtgacccgga tgcgattgct gctgtcgaca
      181 tgcgcgctct tggccgcaac gatgtgttgt ggctgttcca tgtctgcggg cgtcgtgcgc
      241 gaggacgtgc cggatcgctt cgagcgtttg aaccgcgggg tctacaagtt caaccgggcc
      301 ttggacaaag cagtcgtgag gccaatcgcg cgcggctacg atcgagtcgt gcccgcgccc
      361 gtggaccgac acacgcgcaa ctttttcacg aacttggccg ctccgatcga catcatgaac
      421 aacttcctgc aggccaaatt caagccgggg ttctccgact tcgggcgctt cttgctgaac
      481 acggtggccg gcgctggatt tttcgatccg gcggcgaagc tcgggctcga gcggcatccc
      541 gaggacttcg gacagacgct ggccgtgtgg ggcgtgccgt cgggcggacc gctgatgctg
      601 ccgatcctcg ggatgggaac cgtgcgcgat tggggcggct ggacggtcga cctgcaaggc
      661 gacttgctct ggcacaacga cgaggacgac gtgaagctgg ggctcgtgct ttggcgcttc
      721 acctcggatc gagcggcgct gctcccggcc gaggctgcgc tcgaagcgtc gttcgacgag
      781 tacgcgttca tccgcagggc gtatctgcaa cggcgccgct atgaagtcta cgacggagcg
      841 ccaccggaag aggacctcgg gctcgatccc gagtcggacc tcgagttgga tcccgagctc
      901 gagctggatc ccgagttgaa tctccatgaa tgattcgagc gccgccgacg cgatcgtcga
      961 catgcgcggg gtcgaatact cgatcggctc gcgcgtgatt ctctccgggc tcgacctcgc
     1021 ggtgcgccgc ggccgcatca cggcgatcat ggggccgagc ggcgccggca agaccacgct
     1081 tctgaagctg atcacggcac aggctgcgcc gactcgcggg caggtcctgg tgttcggcgc
     1141 ggacctcgcg acgcttcgtc gcccgcaagt attcgccctg cgcaagcgca tgggtatgtt
     1201 gtttcagaac ggcgccttgc tcacggattt ggacgcgttc gagaacgtcg cgtttccgtt
     1261 gcgcgagcac acggacttga gcgagccgct gatccgcgcg ctcgtgatcg cgaagctgaa
     1321 cgcggtgggc ctgcgcggcg ccgccacgat gatgccggcc gagctgtccg gcggaatggc
     1381 gcggcgggtc gcgctcgcgc gtgcgatcgc gatggatccc gagctcttga tctacgacga
     1441 gcccttcgtg ggcctcgatc cgatctcgcg cggcgtgata ctgcgcctga ttcgccagat
     1501 gaacgacggt ttggggatca ccagcatcgt ggtctcgcac gacgtgcacg acctcgcaga
     1561 gatcgccgac gacggctact tgatttccgg cggcaaggtc gtcgcgcatg gcacgccccg
     1621 cgagctcctc gcgagcggct c
//
LOCUS       DATCUD010000035         2550 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14552, whole genome shotgun sequence.
ACCESSION   DATCUD010000035 DATCUD010000000
VERSION     DATCUD010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14552"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VIQ99_00530"
     CDS             complement(<1..800)
                     /locus_tag="VIQ99_00530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003983348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9181649.1"
                     /translation="MTNVSAEPLVFAPARELAARIARRDVSVVEVMRAFLAQIERVNP
                     LVNAIVTLRPSDELLAEAESADRRLTSGEPAGPLHGLPIAIKDLSLTRGLRTTFGSTL
                     YRNFVPTSDDLYVDRLRRAGAIVIGKTNTPEFGAGSQTFNALFGATRNPYDPTKTCGG
                     SSGGAAVALACGMLPLADGTDLGGSLRNPASFCNVVGFRPSPGRVPRLHARPDDTLGV
                     HGPMARSVDDLALLLSVMAGPDPRDPMSLPEPGTTLRDVPARAYTGVRV"
     gene            complement(826..2508)
                     /gene="leuA"
                     /locus_tag="VIQ99_00535"
     CDS             complement(826..2508)
                     /gene="leuA"
                     /locus_tag="VIQ99_00535"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019642147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEY9181650.1"
                     /translation="MRQFDYRKYRPYRPISLADRSWPNRTIERAPDWCSVDLRDGNQA
                     LVQPMSVAKKLEMFALLTEIGFKEIEIGFPSASQTEYDFARRLIDKGLIPDDVTVQVL
                     TQARRELIERTFEALRGVKRAVVHVYNSTSPVQREQVFKAGKQEIIGIAVNGARLLQD
                     GAARHRGVDWTFEYSPESFSGTEPDFAVDVCNAVIDVWQPQRGQKVVINLPATVEMTT
                     ANVFADQVEYFCRHVAQREHIRVSLHTHNDRGCAVAASELGLLAGADRIEGTLFGNGE
                     RTGNMDIVTLAMNLYSQGIDPKLDFGDMSRIIEVYKRCTDMPVHPRHPWAGDLVYAAF
                     SGSHQDAIRKSMAFHRDHGLPHWAVAYLPIDPKDLGRRYEEVVRINSQSGKGGVALVL
                     ERDHGITVPKWLHPAVSRVVQAEADATGEEISSRQIGALFDKHFLSVPDGWRLDGYDL
                     HSEAQRTHGKFRLAAKGAELVLTGDGQGLIEALIDAVNRRFGVSIEVVDFDEHAMSAG
                     TEAKALASVTVEIAGTKASACCIHEDTSLASLQATLSAIGRALAAQSLRQAI"
BASE COUNT          432 a          864 c          834 g          420 t
ORIGIN      
        1 acgcgaacgc cagtgtaggc gcgcgccggc acgtcgcgga gggtcgtgcc gggctccggc
       61 agcgacatcg gatcgcgcgg gtcaggcccg gccattacgg acaacagcag cgcgagatcg
      121 tcgacactgc gcgccatcgg accgtgcacg ccgagcgtat cgtccgggcg cgcgtgcagg
      181 cgcggaactc gcccgggaga cggcctaaat cccacgacgt tgcagaagct cgccgggttt
      241 cgcagcgagc cgcccaagtc cgtgccgtcc gcgagcggca gcatgccgca cgcgagcgcg
      301 accgccgcgc caccgctgct gccaccgcac gtcttcgtcg ggtcgtatgg attccgtgtc
      361 gcaccgaaca gcgcgttgaa cgtctgcgag cccgcgccga actccggcgt gttggtcttg
      421 ccgatcacga tcgcacccgc gcgccgcaag cggtcaacgt acagatcgtc cgacgtcggc
      481 acgaagttcc ggtacagcgt cgagccgaac gtcgtgcgca acccgcgcgt gaggctcaag
      541 tccttgatcg cgatcggcag gccatgcagc gggcccgcgg gctcaccgga cgtgagccgt
      601 cgatcggcgc tctcggcttc ggcgagcagc tcatcggagg gacgcagagt cacgatcgcg
      661 ttcacgagcg gattcacgcg ctcgatctgc gcaagaaatg cgcgcatgac ctcgacgacc
      721 gaaacgtcgc gacgcgcgat gcgcgcggcg agctcgcgcg ccggcgcgaa cacgagcggc
      781 tccgctgaaa cgttggtcac cggcggacgc cgcgaagggg gcgagctaga ttgcctggcg
      841 caagctctga gccgcgagcg cgcgaccgat cgcggacagc gtcgcctgta acgacgcgag
      901 cgaggtgtcc tcgtgaatgc agcacgcgct cgccttggtg ccggcgattt cgacggtgac
      961 cgacgcgagc gccttcgcct ccgtgccggc cgacatcgcg tgctcgtcga agtcgacgac
     1021 ctcgatgctg acgccgaagc ggcggttcac ggcgtcgatc agcgcctcga tcaacccttg
     1081 gccgtcgccg gtgaggacga gctcggcacc cttcgccgcc aaccggaact tgccgtgagt
     1141 gcgctgcgct tcggagtgca gatcgtagcc gtcgagacgc cagccatccg gcacgctcaa
     1201 aaaatgcttg tcgaagagcg cgccgatctg ccgcgacgag atctcctcgc cggttgcgtc
     1261 ggcctccgcc tgcacgacgc ggctcacggc cggatgcagc catttcggca ccgtgatgcc
     1321 gtgatcgcgc tccagcacga gcgcgacccc acccttgccg gactggctgt tgatgcgcac
     1381 gacctcttcg taacggcgcc cgagatcctt cggatcgatg ggcagatacg caacggccca
     1441 atgcggcaac ccgtggtcgc gatggaatgc catcgacttc ctgatcgcgt cctggtgact
     1501 gcctgaaaac gccgcgtaga ccaggtcgcc ggcccagggg tgacgcggat gcacgggcat
     1561 gtccgtacag cgcttgtaga cctcgatgat tcggctcatg tcgccgaaat cgagcttcgg
     1621 gtcgataccc tgcgagtaga gattcatggc caacgtgacg atgtccatgt tgccggtacg
     1681 ctcgccgttg ccgaacaacg tgccttcgat gcgatcggcg cccgcgagca agccgagctc
     1741 ggacgccgcg acggcgcagc cgcggtcgtt gtgcgtgtgc aagctgacgc gaatgtgctc
     1801 gcgttgcgcg acgtggcggc agaaatactc gacctgatcc gcgaacacgt tcgcggtcgt
     1861 catctcgacc gtcgccggga ggttgatcac gaccttctga ccgcgttgcg gctgccacac
     1921 gtcgatgacg gcgttgcaga cgtcgacggc gaagtccggc tccgtgcccg agaagctctc
     1981 gggcgaatat tcgaacgtcc agtccacacc acggtgtcgc gccgcgccgt cctgcagcaa
     2041 tcgtgcgccg ttcacggcga tgccgatgat ctcctgctta ccggccttga agacctgctc
     2101 gcgctgcacg ggcgatgtgg agttgtagac gtgcacgacc gcacgcttca cgccgcgcag
     2161 cgcctcgaac gtgcgctcga tcagctcgcg tcgcgcctgc gtcaggacct gtaccgtaac
     2221 gtcgtcgggg atcagtccct tgtcgatcag ccggcgcgcg aagtcgtact cggtctgcga
     2281 tgccgacggg aaaccgatct cgatctcctt gaacccgatt tccgtcagca gcgcgaacat
     2341 ctcgagcttt ttcgccaccg acatcggctg cacgagcgcc tgattgccgt cgcgaagatc
     2401 gaccgagcac cagtcgggcg cgcgctcgat cgtgcgattg ggccacgacc gatcggccag
     2461 cgagatcggc cggtacggtc ggtatttgcg atagtcgaac tgcctcatga tgatccttcg
     2521 ggcggccgta tcggccatca gtgcggagca
//
LOCUS       DATCUD010000036         2138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_28755, whole genome shotgun sequence.
ACCESSION   DATCUD010000036 DATCUD010000000
VERSION     DATCUD010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28755"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2138
                     /locus_tag="VIQ99_00540"
     CDS             <1..>2138
                     /locus_tag="VIQ99_00540"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEY9181651.1"
                     /translation="LEGFAARMEPAAVPPRAAPAGAAPASTASVPAAPTPAAPAPAVT
                     APAEGAFDPEIAAIFAEEAAEILDSAQAALQDVRQRQEQGSVAMLQRYLHTLKGGARM
                     AGVMPMGDLSHALETLLARVAEGRSRPTQAALDLVQRGLDELQQMRDAIDAGRRVTPV
                     AALIAELEGSEAPVVASAAAAATAPPVAPAPPAKPAVAAPRAVPPPPEPVGMPAIDLT
                     EADLRQLEEIELPPPSHDTLIEDFRAAAEVVEEPTVEEPAAIEEALVAHEQTVVEPPG
                     VVVGRADALAEEPPEIEAPAPQAAPPPVVEARTPERAEIARVDASLLDVLLNGAGEIN
                     IFQSRLSQQLHSIEFHLGELGGTVSRLREQLRKLEAETEAQILHRHQDDADVQSGFDP
                     LELDRYSTIQQLSRALAESANDVASINELLNGLTGEADTLLTQQARVTSELQNGLMQT
                     RMVPFNRHVPRLERIVRQACADTGKQAELVVEGEASEIDRQVLESMLPAFEHLLRNAV
                     AHGIETAAVRRKRGKPELGKVLLKIRREGSEVITEVSDDGGGLDLAAIRRKAFEKGFV
                     AENQRITDEQAIELILQPGFSTASELTHAAGRGVGMDVVDNEIKKLGGSLRIETTPGQ
                     GTRFVIRLPYTLAITHALIVNVGDETFALPLPTVEGITRLSRDKILKHLTQDEPKLDY
                     GGVVYRIQHLGSLVGAAPSALPEDENAVSLV"
BASE COUNT          373 a          720 c          743 g          302 t
ORIGIN      
        1 ctcgagggat tcgctgcgcg catggagccc gccgcggttc cgccgcgggc cgcgcccgct
       61 ggcgcggctc cggcgtccac agcgtccgtt cctgcagcgc ccacgcccgc agccccggcg
      121 ccagccgtca cggcacccgc ggagggcgcg ttcgatcccg agatcgcggc gatcttcgcc
      181 gaagaagccg ccgagatact cgacagcgcc caagccgcgc tccaagacgt ccgacagcgt
      241 caagagcaag gctccgtcgc gatgttgcag cgctacctgc acacgttgaa gggcggagcc
      301 cggatggccg gtgtcatgcc gatgggcgac ctcagccatg cgctcgaaac gttgctcgcg
      361 cgagtcgccg aaggacgcag ccggccgacg caggctgcgc tcgatctcgt gcagcgcggc
      421 ctcgacgagc tgcaacagat gcgcgatgcg atcgatgccg ggcgccgcgt cacgccggtg
      481 gcggcgttga tcgcggagct cgagggctcc gaagctccgg tcgtcgcgag cgccgcggcg
      541 gctgcgacgg caccaccggt tgcccccgcg ccccccgcca agccggcggt cgctgcgccg
      601 cgagccgttc cgccgccgcc ggaacccgtc gggatgccgg cgatcgatct gaccgaagcc
      661 gatctacgcc agctcgaaga gatagagctc ccgccgccgt cccacgacac cttgatcgag
      721 gattttcgag ccgccgccga agtcgtcgag gagccgacgg tcgaggagcc ggcggcgatc
      781 gaagaagcac tagtggctca cgagcaaacc gtcgtcgaac cgccgggcgt ggtcgtaggg
      841 cgggcggacg cgctcgcaga agagccgcct gaaatcgaag cgccggcgcc gcaggccgcg
      901 ccgccgcccg tcgtcgaggc gcgaaccccc gagcgggccg agatcgcgcg cgtcgacgcg
      961 agcttgctcg acgtgctgtt gaacggcgcc ggcgagatca acatcttcca gtcgcgcctg
     1021 agccagcagc tgcactcgat agaatttcac ttgggcgagc tcggcggcac ggtgtcgcgc
     1081 cttcgagagc agctgcggaa gctcgaggcc gaaacggagg cccagatcct gcatcggcat
     1141 caggatgacg ccgacgtcca gagcggtttc gatccgctcg agctcgatcg ttactcgacg
     1201 attcagcagc tgtcgcgcgc gctcgcggag tccgcgaacg acgtcgcgag catcaacgag
     1261 ctcttgaacg gattgacggg tgaggccgac acgctgctga cccaacaagc gcgcgtcacg
     1321 tctgagcttc agaacggcct gatgcagacg cgcatggtgc cgttcaaccg gcacgtgccg
     1381 cggctggaac gcatcgtccg gcaggcgtgc gccgataccg gcaagcaggc ggagctcgtc
     1441 gtcgaaggcg aggccagcga gatcgaccgt caggtcttgg agtcgatgct gccggcgttc
     1501 gagcatttgc tccggaatgc cgttgcgcat ggcatcgaga ccgcggccgt gcggcggaag
     1561 cgcggcaagc cggaattggg caaggtgctg ctgaagatcc ggcgcgaggg atccgaggtc
     1621 atcaccgagg tcagcgacga cggtggcggg ctggatctcg ccgccatccg ccgcaaagcc
     1681 ttcgagaagg gcttcgtggc cgagaaccag aggatcaccg acgagcaggc catcgagctg
     1741 atcctgcaac cgggcttcag caccgcgagc gagttgactc acgcggccgg tcgcggcgtc
     1801 ggaatggacg tagtcgacaa cgagatcaag aagctcggcg ggtcgctcag gatcgagacg
     1861 acgccgggcc aaggcacgcg cttcgtgatc cggctgccgt acacgctcgc gatcacgcac
     1921 gcgctgatcg tgaacgtcgg cgatgaaacc ttcgcgttgc cgctgccgac cgtcgagggc
     1981 atcacgcgtc tgtcgcgcga caagatcctg aagcacctca cgcaggacga gccgaagctc
     2041 gactatggcg gcgtcgtgta tcgaattcag cacctgggta gtctcgtcgg tgccgcgccg
     2101 tcggcgttgc ccgaggacga gaatgcggtg tcgctggt
//
LOCUS       DATCUD010000037         2314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85571, whole genome shotgun sequence.
ACCESSION   DATCUD010000037 DATCUD010000000
VERSION     DATCUD010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85571"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1515
                     /locus_tag="VIQ99_00545"
     CDS             <1..1515
                     /locus_tag="VIQ99_00545"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HEY9181652.1"
                     /translation="SVLRNYPLIGHLRFLLEFIRPEIRQYFIESDNEETPFSRQQRSI
                     VYQRAKGESDKRPFGTQLDQRTTGYEWLNHSLMPTDIASQDFRVTVGSASSCTQPYSA
                     SVLNISAMSFGALSANAILALNGGAKKGGFAHDTGEGAISPYHRVHGGDLIWEVASGY
                     FGCRDEHGRFSEERFVANATSPQVKMIEVKLSQGAKPGHGGVLPGSKVTPEIAATRGV
                     RSGEECLSPARHSEFSTPIELLQFVERLRKLSGGKPTGFKLCIGHPWEWFAIVKAMLE
                     TGLRPDFIVVDGSEGGTGAAPLEFADHVGTPLQEGVLLVHNTLVGVNLRDRIKIGCSG
                     KIISAFDIARAMALGADWCNSARGFMFALGCLQAQTCHTGNCPTGVATQNPLRQKALA
                     VPDKMERVYRFHHHTLGALKEITQAAGLMHPNEFRTTHLVVRVSQHDVRLLANLLPQV
                     RPGQLLEAEAGQAEWPHKAFTIYWPLANAHSFAPNPVQVSGTADVQGLLRESAA"
     gene            1622..>2314
                     /locus_tag="VIQ99_00550"
     CDS             1622..>2314
                     /locus_tag="VIQ99_00550"
                     /inference="COORDINATES: protein motif:HMM:NF014827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase dimerization
                     domain-containing protein"
                     /protein_id="HEY9181653.1"
                     /translation="MVRARPPRPKGQKDRKAAARRSQIAGSREEWHVSAFDNALEQFD
                     AAARRLRLSDNQIAMIKLPRRMTEVLLPVRMDDGTIRTFRAFRVQHNVARGPAKGGIR
                     FHQDVTIDEVKALAFWMTFKCAVVGIPMGGAKGGVVVDPRTLSAREREQLSRRYMAEL
                     IDLFGPDSDVPGPDVNTGPQVMGWMLDTYVMHKRDYLPAVITGKPTVLGGSAGRQSAT
                     SRGLHCCVNQAAD"
BASE COUNT          409 a          753 c          782 g          370 t
ORIGIN      
        1 tcggtgctgc gcaactatcc gctgatcggt cacctgcggt ttctgctcga gttcatccgc
       61 cccgagatcc ggcagtactt catcgagagc gacaatgagg aaaccccgtt ctcgcggcaa
      121 cagcgctcga tcgtctatca acgcgcgaag ggcgaatccg acaaacggcc gttcggcacc
      181 cagctcgacc agcgcaccac gggctacgag tggctgaacc attcgctgat gcccacggat
      241 atcgcgtcgc aggactttcg cgtcacggtt gggtccgcgt cgagctgcac gcagccgtac
      301 agtgcaagcg tgctcaatat ttcggcgatg agcttcggcg cgttgtccgc aaacgcgatt
      361 ctggcgctga acggcggcgc gaagaagggt ggctttgcgc acgacaccgg cgagggcgcg
      421 atcagcccct accatcgcgt gcacggcggc gacctgatct gggaagtggc ttcgggctac
      481 ttcggctgcc gcgacgagca cggccgcttc agtgaggagc gcttcgttgc gaatgcgacg
      541 agcccgcagg tcaagatgat cgaggtcaag ctatcgcaag gcgcgaagcc gggccacggc
      601 ggcgtgctgc cggggtcgaa ggtgacgccc gagatcgccg cgacacgcgg cgtacgcagc
      661 ggcgaagaat gcctgagccc cgcgcggcac agtgagttca gcacgccgat cgagcttctg
      721 cagttcgtcg agcggctgcg gaagctgtcg ggcggcaagc cgaccggttt caagctctgc
      781 atcggccatc cgtgggagtg gttcgcgatc gtcaaggcga tgctcgagac cggcctacgg
      841 cccgatttca tcgtcgtcga cggttccgaa ggcggcacgg gcgccgcacc gctcgagttc
      901 gcggaccacg tcggcacccc gctccaggaa ggtgtgctcc tggtccacaa cacgctcgtc
      961 ggcgtcaacc tgcgcgaccg catcaagatc ggctgcagcg gcaagatcat cagcgcgttc
     1021 gacatcgcgc gggcgatggc gctcggtgcg gattggtgca actcggcgcg cggtttcatg
     1081 ttcgcgttgg gctgcctgca ggcgcagacg tgccacacgg gcaattgccc gaccggcgtc
     1141 gcgacgcaga atccgctgcg ccaaaaggcg ctggccgtgc ccgacaagat ggagcgtgtg
     1201 tatcgtttcc accatcacac cctcggtgcg ctgaaggaaa tcacgcaggc cgcggggctg
     1261 atgcatccga acgagttccg caccacgcat ctcgtggtgc gcgtgtcgca gcacgacgtc
     1321 cgcctgctcg cgaacctatt gccgcaggtt cggcccgggc agttgctcga ggcagaggcc
     1381 ggccaggccg agtggccgca caaggccttc acgatctatt ggccgctggc gaacgcgcat
     1441 tcgttcgctc cgaacccggt gcaggtgtcg ggcacggccg atgtccaagg cttgctgcgt
     1501 gaatccgcgg cctagcgcca ccaaacccca ctaggcgccg cagacgcgcg ctggcccggt
     1561 gaccgacgga tcgcgagcgg ggtgcccacg atccggcgca ccggctagaa tcggcgtcgt
     1621 catggtaaga gcaagaccgc cgcgtccgaa aggacagaag gaccgcaagg ccgcagcgcg
     1681 ccgctcgcag attgccggtt cccgcgagga gtggcacgtc tccgcgttcg acaacgcgct
     1741 ggaacagttc gacgcggccg cgcgtcggtt gcgcctcagc gacaatcaaa tcgcgatgat
     1801 caagttgccg cggcgcatga ccgaggtcct gctgcccgtg cgcatggacg atggcacaat
     1861 ccgcacgttc cgcgcgttca gggtccagca caacgtcgcg cgtggacctg cgaagggcgg
     1921 cattcgtttc caccaggacg tgaccatcga cgaggtcaag gcgctcgcgt tctggatgac
     1981 gttcaagtgt gcggtcgtcg gcatccccat gggcggtgcg aaaggcggag tcgtcgtcga
     2041 cccgcgaacg ctttcggcca gggagcgtga gcagctatcg cggcgctaca tggccgagct
     2101 gatcgacctg ttcgggccgg acagcgacgt gccgggcccg gacgtgaaca cgggcccgca
     2161 ggtcatgggg tggatgctcg acacctatgt catgcacaag cgcgactatc tgccggccgt
     2221 gatcacgggc aagccgaccg tgctcggcgg ctcggcggga cggcagagcg cgacgtcgcg
     2281 cggcctccat tgctgcgtga accaagcggc cgac
//
LOCUS       DATCUD010000038         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42965, whole genome shotgun sequence.
ACCESSION   DATCUD010000038 DATCUD010000000
VERSION     DATCUD010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42965"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1616
                     /gene="secD"
                     /locus_tag="VIQ99_00555"
     CDS             <1..1616
                     /gene="secD"
                     /locus_tag="VIQ99_00555"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEY9181654.1"
                     /translation="RFLGLEPMLLGLDLRGGVHLLYQVDLSAAVSQYLETYESTLRTQ
                     FRQANIRSDVRVVDANLRVAIVEPSDMDRAEAIIRRLEQGDQLLQLGQLTSRLIIDRA
                     QVDGRSGFNVRLTEVAIRERQDFAIQQNTLTMRNRVNQLGVAEAVVQRQGLDRILVQL
                     PGIQDPGRAKDILSSTATLEFHLVDHNNDAFEAERRNRAPLGSELHHREDGSPILLQR
                     EVVASGDQLLDAIQTYQQGRPVVSIQLDATGGRRMLDATIDNVGRNLAVLFIEDRPQF
                     IERDGERVPGPPVRTERVISDATINSALSNNFVITGLSVFEGQRLALLLRAGSLAAPI
                     VPIEERTIGPSLGRDNIERGIDATLIGYLLVVIFIGIWYRMFGMLANVALFMNVIMIV
                     ALMSLIPGAALTLPGIAGIVLTVGMSVDANVLIFERIREELGNGNTPQNSIRAGWDKA
                     YTTIVDSNLTTVIAAIVLFMFGTGPIKGFAVTLTLGIATSMFTAITVTRALVNLVYGG
                     RKNVKSLSIGGRHIQSEAVASLTKAKASS"
BASE COUNT          287 a          500 c          524 g          307 t
ORIGIN      
        1 tgaggttcct gggtctcgag ccgatgctgc tcggcctcga tttgcgcggc ggcgtgcact
       61 tgctctacca ggtcgacctg agcgcggccg tttcacagta tctcgagacg tacgagagca
      121 ccctgcgaac gcagttccgg caggcgaaca tccgtagtga cgtccgtgtc gtcgacgcca
      181 atttgcgggt tgctatcgtc gagccgtccg acatggaccg cgccgaggcc atcattcgcc
      241 gactcgagca aggcgatcag ctgcttcagc tcggccagct cacgagccgg ctgatcatcg
      301 atcgcgcgca ggtcgacggg cgttccggct tcaacgtgcg gctgacagag gtcgcgattc
      361 gggaacgcca ggacttcgcg atccaacaga acacgttgac gatgcgcaac cgcgtcaacc
      421 agctcggcgt ggcggaagcc gtcgtgcagc gccaaggcct cgaccggatc ctggtccagc
      481 tgcccggcat tcaggacccg ggcagggcga aggacatctt gagctcgacg gccacactcg
      541 agtttcattt ggtcgaccac aacaacgatg cgttcgaagc agaacgacgc aatcgcgcgc
      601 cgctcggctc ggagctgcat catcgtgagg acggctcgcc gatcctgctg cagcgcgagg
      661 tcgttgcctc cggcgatcag ctgctcgacg cgattcagac ctaccagcag gggcggccgg
      721 tcgtcagcat ccagctcgac gccaccggcg gtcgccggat gctcgatgcg accatcgaca
      781 acgtcggacg taatctcgcg gtgctcttca tcgaggatcg gccgcaattc atcgagcgtg
      841 atggcgagcg cgtgcccggc cctccggtgc gcacggaacg agtcatcagc gacgcgacta
      901 tcaactccgc gctgtcgaac aatttcgtga tcacgggttt gtccgtgttc gaggggcaga
      961 ggctcgcgct gttgctgcgc gccggctcgc tggccgcacc gatcgtaccg atcgaggaac
     1021 gcacgattgg cccgagcttg gggcgcgaca atatcgagcg cggcatcgac gcgacgctga
     1081 ttggctactt gctcgtcgtg attttcatcg gcatctggta tcgcatgttc ggcatgctcg
     1141 cgaacgtcgc gctgttcatg aacgtgatca tgatcgtggc gctgatgtcg ttgattccgg
     1201 gtgccgctct cacgctgccg ggtatcgccg gcatcgtgct cacggtcggc atgtcggtgg
     1261 atgcgaacgt gttgatcttc gagcgtatcc gcgaggagct cggcaacggc aacacaccgc
     1321 agaacagtat ccgtgcgggt tgggacaagg cgtacacgac gatcgtggac tcgaacttga
     1381 cgaccgtgat cgctgcgatc gtgctgttca tgttcggcac cgggccgatc aaggggttcg
     1441 cggtgacgct gacgctcggc atcgcgacgt cgatgttcac ggcgatcacc gtcacgcgcg
     1501 cgctcgtgaa tctcgtctac ggcggccgca agaacgtgaa gtcgctgtcg ataggcgggc
     1561 gccacattca gagcgaggcg gtcgcctcgc tgacgaaggc gaaagcttcg agttgagt
//
LOCUS       DATCUD010000039         1516 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35887, whole genome shotgun sequence.
ACCESSION   DATCUD010000039 DATCUD010000000
VERSION     DATCUD010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1516
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35887"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1516)
                     /gene="acnA"
                     /locus_tag="VIQ99_00560"
     CDS             complement(<1..>1516)
                     /gene="acnA"
                     /locus_tag="VIQ99_00560"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017908729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY9181655.1"
                     /translation="LEYLSRVVFEKQVGKHRFAYPDTLVGTDSHTTMINGLGILGWGV
                     GGIEAEAAMLGQPITMLIPQVVGFELKGRLAEGATATDLVLTVTEMLRKHGVVGKFVE
                     FYGDGLDHLPLADRATIGNMSPEFGSTCAVFPIDAETLRYLELSGRSREQIELVEAYA
                     KTQGLWRSSKKARYSSVLSLDLAAVEPSISGPKRPQDRIALKGAGAKVGELLKAAGKG
                     TKAPVTAGSQKYDLEDGAVVIAAITSCTNTSNPAVMVGAGLLARNAAAKGLTRKPWVK
                     TSLAPGSKVVTDYLKACNLLDDLDQIGFNLVGYGCTTCIGNSGPLPDEIAAALGKSDV
                     VACSVLSGNRNFEGRIHPQVKMNFLASPPLVVAYAIAGSMKLDLTKDPLGVGKDGKPV
                     YLKDVWPSSKEIHDLIAKHVTSAQFKSSYASVFQGDTNWQSVATPKGENFTWSDDSTY
                     VKHPPYFEGMTLKTGTPQNIKGARVLAMLGDSVTTDHISPAGNIASTSPAAKYLE"
BASE COUNT          220 a          493 c          520 g          283 t
ORIGIN      
        1 tctccaggta tttcgcggcc gggctggtcg aggcgatgtt gccggccggc gagatgtgat
       61 ccgtcgtgac cgagtcgccc agcatcgcga gcacgcgcgc gcccttgatg ttctgcggcg
      121 tgcccgtctt gagcgtcatg ccttcgaagt acggcgggtg cttcacgtac gtcgagtcgt
      181 cgctccacgt gaagttctcg cccttcggcg tcgccacgga ttgccagttc gtatcgccct
      241 ggaacacgct cgcgtagctc gacttgaact gcgccgatgt cacgtgcttc gcgatcaggt
      301 cgtgaatctc cttcgacgac ggccacacgt ccttgaggta gacgggcttg ccgtccttgc
      361 cgacgccgag cggatccttc gtgagatcga gcttcatgct gccggcgatc gcgtacgcaa
      421 cgacgagcgg cggcgacgcc aggaagttca tcttgacctg cgggtggatg cggccttcga
      481 aattgcggtt gccggagagc acggagcagg cgacgacgtc gctcttgccg agcgcggccg
      541 cgatctcgtc gggaagtggg ccggagttgc cgatgcaggt cgtgcacccg tagccgacga
      601 ggttgaagcc gatctggtcg aggtcgtcga gcaggttgca ggccttcagg tagtcggtca
      661 cgaccttcga gcccggcgcc aggctcgtct tgacccacgg cttgcgcgtg aggcctttgg
      721 ccgcggcgtt gcgcgcgagc aggccggcac cgaccatcac ggccgggttc gacgtgttcg
      781 tgcagctcgt gattgccgcg atcacgacgg cgccgtcctc gaggtcgtat ttctgggagc
      841 cggcggtcac gggagccttc gtgcctttcc cggcggcctt cagaagctcg ccgaccttcg
      901 cgccggcacc cttgagcgcg atccgatcct gcgggcgctt cggtccggag atgctgggct
      961 cgacggctgc gaggtcgagc gacaggacgc tgctgtagcg cgccttcttc gagctgcgcc
     1021 agaggccctg agtcttcgcg tacgcctcga cgagctcgat ctgctcgcgc gagcggcccg
     1081 agagctcgag gtaccgcagc gtctcggcgt cgatcgggaa cacggcgcac gtgctgccga
     1141 actccggcga catgttgccg atcgtcgcgc ggtcggcgag cggcaggtga tccagcccgt
     1201 cgccgtagaa ctcgacgaac ttgccgacga cgccgtgctt gcggagcatc tcggtgacgg
     1261 tcagcacgag gtccgtggcc gtcgcgccct cggcgagccg acccttgagc tcgaagccga
     1321 cgacctgcgg gatcagcatc gtgatcggct gcccgagcat ggcggcttcg gcctcgatgc
     1381 cgccgacgcc ccagccgagg atgccgagcc cgttgatcat cgtcgtgtgc gaatcggtgc
     1441 ccacgagcgt gtcggggtag gcgaagcggt gcttcccgac ctgtttctcg aagaccacac
     1501 ggctcaagta ctcgag
//
LOCUS       DATCUD010000040         2611 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92738, whole genome shotgun sequence.
ACCESSION   DATCUD010000040 DATCUD010000000
VERSION     DATCUD010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2611
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92738"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VIQ99_00565"
     CDS             <1..403
                     /locus_tag="VIQ99_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003817154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY9181656.1"
                     /translation="IRLAITVEGLQVTVVDEQNRPMFDTGGADIKDYTRDVMRAIGEL
                     LNDVDNAISLAGHTDAVQYARGERGYSNWELSADRANASRRELVAGGMKENKVLRVVG
                     LGSSLPLDAADPLNPMNRRISLVVLNDKTER"
     gene            complement(585..770)
                     /locus_tag="VIQ99_00570"
     CDS             complement(585..770)
                     /locus_tag="VIQ99_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013441187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEY9181657.1"
                     /translation="MIAGLRRAWVLFRELTGDDAYERYLRHWRDHHASGGGEPLDRAA
                     FYRDEQRRKWDGVRRCC"
     gene            complement(776..>2611)
                     /locus_tag="VIQ99_00575"
     CDS             complement(776..>2611)
                     /locus_tag="VIQ99_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020481424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEY9181658.1"
                     /translation="ENGRDFVPTHRWIVFGHHFAAIAGPGPLIGPTLAAQFGYLPGTL
                     WILIGAVLGGCVQDFVALFCSIRRDGRSLGQMARDELGPIGGAVALIGVMAIMIILIA
                     VLGLVVVNAMRHSPWATSTVAATIPIAVMIGLFMRHLRPGRVLEGTAIGVVLLLAAVF
                     GGGWIDDHSTLRTWFDYDAPALALMVIAYGFAAAVLPVWLLLAPRDYLSTFMKIGTIV
                     ALAIAILVLNPAVKMPALTQFIDGTGPIFGGNVFPFVFITIACGAISGFHSLIASGTT
                     PKLLANERDARIIGYGAMAMESFVAVMAMVAACVLDPGVFFAINSPAGVVGAQAADAV
                     ATITSWGYPVTVAQMDLLAQEMGESSLFARTGGAPSLAVGMASIFSNAFGNTLLSVWY
                     HFAIMFEALFILTTVDAGTRVARFMLQDLLGNVARPLGRTSWYPSVLLCSALVVAGWG
                     YFLYFGTIDPLGGINSLWPLFGIANQMLAAIALCVATTVLVKSGRVRFVWVTALPLLW
                     LVAVTTMAAWEKLFSPDLRVGFLSHADDLAAQLAAGTLSDAAAAQAPQLIFNDRLDAA
                     LTLFFLVTVWVLIVETARICHASLSGRQCPPLAETPHVPTRLAEG"
BASE COUNT          541 a          836 c          862 g          372 t
ORIGIN      
        1 gatccgcctc gctatcacgg tcgaaggttt gcaggtcacc gtcgtcgacg agcaaaaccg
       61 cccgatgttc gataccgggg gtgccgacat caaggactac acgcgcgacg tcatgcgcgc
      121 gatcggtgag ttgttgaacg atgtggacaa cgcgatctcg ctggcgggcc atacggacgc
      181 ggtccaatac gcgcgcggcg agcggggcta ttcgaactgg gagctttcgg cggaccgcgc
      241 caacgcatcg aggcgcgagc tcgtggccgg cggcatgaag gagaacaagg tcctgcgcgt
      301 cgtcggtctc ggttcgtcgt tgccgctcga tgcggcagac ccgttgaacc cgatgaaccg
      361 gcgcatcagc ctggtggtgc tgaacgacaa gactgagcgc taaattcgcg ggctgcccga
      421 ggagcccgag gaagaaattc aaaccgaggc cgacgcggca cagttgctcg ggcagggtgc
      481 gggcgccgag ggtggcggtg tcccggtcga cgcagccgcg ctagagccgc aggtggcgca
      541 gcccgaggcc gcgcgagcgc cgctctaacg tcttctggct cggatcaaca acagcggcgc
      601 acgccatccc acttgcggcg ctgctcgtcg cggtagaagg cggcgcggtc cagcggctcg
      661 ccacctccgc ttgcgtgatg gtcgcgccag tgacgcagat aacgctcgta agcgtcgtct
      721 ccggtcagct cgcggaacag aacccaagcg cggcgaagcc cggcaatcat ttgccttaac
      781 cctcggcgag tcgggtagga acgtgcggcg tctccgcaag cggaggacac tgccggcccg
      841 acaacgacgc gtgacagatg cgcgccgttt cgacgatcaa gacccacact gtgaccagga
      901 agaacaacgt cagcgcggca tccagccggt cgttgaagat cagctgcggc gcttgggcgg
      961 ctgcggcgtc ggacagagta ccggcggcga gttgcgcagc caagtcgtcg gcgtgcgaga
     1021 ggaagccgac gcgcaagtcc gggctgaaga gcttttccca agcagccatc gtcgttacgg
     1081 cgacgagcca gagcaacggt agcgcggtca cccagacgaa tcgtacgcgg cccgatttca
     1141 cgagcaccgt tgtcgcgacg cacaacgcga tcgcggccaa catctggttt gcgatcccga
     1201 acaggggcca caggctgttg atgccgccga gcggatcgat ggtgccgaaa tacaggaaat
     1261 agccccagcc ggcgaccacg agcgcgctgc acagcaacac actcgggtac cagctcgtgc
     1321 ggccgagcgg ccgcgccacg ttgccgagta aatcttgaag catgaaccgg gcgacgcgcg
     1381 taccggcgtc gaccgttgtc aggatgaaca acgcttcgaa catgatcgcg aagtgatacc
     1441 agaccgaaag cagcgtgttg ccgaacgcgt tcgagaagat gctggccata ccgactgcga
     1501 gcgagggtgc gccgccggtg cgggcgaaca aactcgattc gcccatctcc tgcgcgagca
     1561 agtccatctg cgccacggtg acgggatagc cccacgaggt gatcgtcgcc accgcgtcag
     1621 ccgcttgcgc gcccacgaca ccggccgggc tgttgatcgc gaagaagacg ccgggatcga
     1681 gcacgcacgc ggcgaccatc gccatcacgg cgacgaacga ttccatcgcc atggcgccgt
     1741 agccgatgat tcgtgcgtcg cgttcgttcg cgagcaactt cggcgtcgtg ccggacgcga
     1801 tcaacgagtg gaagcccgag atcgcaccgc acgcaatcgt gatgaacacg aacgggaaca
     1861 cgttgccgcc gaagatcggc ccggtgccgt cgatgaattg cgtcagtgcc ggcatcttca
     1921 cggcaggatt caggaccaag attgcgattg cgagcgcgac gatcgtgccg atcttcatga
     1981 acgtcgacag ataatcgcga ggtgcgagca acaaccatac cggcagcacc gcggctgcga
     2041 agccgtaggc aatcaccatc aacgccagag cgggagcgtc gtaatcgaac cacgtgcgga
     2101 gcgtcgaatg gtcgtcgatc cagccgccgc cgaagaccgc ggccagcaac agcacgacgc
     2161 cgatggccgt gccttcgagc acgcggccgg gacgaaggtg acgcatgaag agcccgatca
     2221 tcaccgcgat cggaatcgtg gcggcgaccg tggacgtggc ccacgggctg tgccgcatcg
     2281 cgttcacgac tacgaggccg agcacggcga tcaagatgat catgatcgcc atgacaccga
     2341 tcagcgcgac cgcgcccccg atcgggccca gctcatcgcg cgccatctgt ccgagcgacc
     2401 tgccgtcgcg gcgaatcgag cagaacaacg cgacaaagtc ttggacgcag ccgccgagca
     2461 cggcgccgat cagaatccaa agagtgccgg gcaagtaacc gaattgtgcg gccagcgtcg
     2521 gcccgatcaa cggaccgggg cccgcgatcg cggcgaagtg atggccgaac acgatccacc
     2581 gatgcgtcgg cacgaagtcg cggccgttct c
//
LOCUS       DATCUD010000041         1557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14622, whole genome shotgun sequence.
ACCESSION   DATCUD010000041 DATCUD010000000
VERSION     DATCUD010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14622"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..981
                     /locus_tag="VIQ99_00580"
     CDS             <1..981
                     /locus_tag="VIQ99_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012470593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HEY9181659.1"
                     /translation="PSSLLVFDHLTRRVALLHAGSESERQALRTQVIKALRGGLDARD
                     NGGHFSPATASMTEREHAAAVTKGKAHIKAGDIYQIVLSVRFAGRTDLDPFQVYRGLR
                     LLNPSPYMYFFELGNLRIAGSSPEALVRLAGRTASLRPIAGTRPRGATPEHDLALEQE
                     LLADPKENAEHVMLVDLARNDLGRVASSGSVHVNPYRRIERYSHVMHIVSGVQGLLAP
                     DKDAFDLFAAAFPAGTLVGAPKVRAMQLIAELEPTGRGLYGGTVGYFAKNGNMDQAIT
                     IRTMVFNGDEYSFQAGGGIVADSVTAAEYQEVMAKSAILRRALELAEEGL"
     gene            978..>1557
                     /locus_tag="VIQ99_00585"
     CDS             978..>1557
                     /locus_tag="VIQ99_00585"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013822933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEY9181660.1"
                     /translation="MSARLLLIDNYDSFTYNLVQAFLVLEADVLVYRNDALSVADATK
                     LKPTHLVISPGPGRPDDAGVSLAMIDAFAGKIPVLGVCLGHQSIVQHFGGEIIGAAAL
                     MHGKTSIVQHDGATIYRGLSNPFEVGRYHSLAANREKMPPDLIVTARTTDGEIMGVRH
                     RKLNVEGVQFHPESVLTPDGPALIGNFLKMSGG"
BASE COUNT          267 a          518 c          526 g          246 t
ORIGIN      
        1 ccgagctcgc tcctggtgtt cgatcacctg acgcggcgcg tcgcgctgct gcacgcgggc
       61 tcggagagcg agcgccaagc gttgcgcacg caggtcatca aggcgctgcg cggcggcctc
      121 gacgcgcgcg acaacggcgg ccacttctcg cccgcgaccg cgagcatgac ggagcgcgag
      181 cacgcggctg cggtgacgaa gggcaaagcg cacatcaaag ccggcgacat ctatcagatc
      241 gtgctgtcgg tgcgcttcgc gggccgcacg gatctagacc cgtttcaggt ctatcgtggg
      301 ctcaggctgc tgaatccctc gccttatatg tacttcttcg agctcgggaa cttaaggatc
      361 gcggggtcct cgcccgaggc gctcgttcgg ctcgcgggcc ggaccgcgtc gctccggccg
      421 atcgcgggca cgcggccgcg cggcgccacg ccggagcacg acttggcgct cgagcaagag
      481 ctgctcgcgg atccgaaaga gaacgccgag cacgtgatgc tcgtggacct cgcacgcaac
      541 gacttgggca gggtcgcgag ctcgggctcc gtgcacgtga acccgtatcg caggatcgag
      601 cgctacagcc acgtgatgca catcgtcagc ggcgtgcagg gcctcttggc ccccgacaaa
      661 gacgcgttcg acttgttcgc ggctgcattc ccggccggca cgctcgtcgg cgccccgaaa
      721 gtccgcgcga tgcagctgat cgccgagctc gagccgaccg ggcgcgggct ctacggcggc
      781 acggtcggct acttcgcgaa gaacggcaac atggatcaag cgatcacgat taggacgatg
      841 gtgttcaacg gcgacgaata cagcttccaa gcgggcggcg ggatcgtcgc cgacagcgtc
      901 acggccgcgg agtatcagga agtcatggcg aagagcgcga tcctgcgccg cgctctcgag
      961 ctcgcggagg agggactatg agcgcgcggc tcctgctgat cgacaactac gattcgttca
     1021 cctacaacct cgtgcaagcg ttcctcgtgc tcgaggccga cgtgctcgtg taccgcaacg
     1081 acgcgttgtc ggtcgcggac gcgacgaagc tcaagcccac gcatctcgtg atctcgccgg
     1141 gcccgggccg ccccgacgac gcgggcgtct cgctcgcgat gatcgacgct ttcgccggca
     1201 agatcccggt gctcggcgtg tgcttggggc accagagcat cgtccagcac ttcggcggcg
     1261 agatcatcgg cgcggcggcg ttgatgcacg gcaagacctc gatcgtgcag catgacggcg
     1321 ccacgatcta tcgcggcctc tcgaatccgt tcgaggtcgg gcgctaccac tcgctcgccg
     1381 cgaaccgcga gaagatgccg ccggatctga tcgtcacggc gcgcacgacg gatggcgaga
     1441 tcatgggagt gcgccatcgc aagctcaacg tcgagggcgt gcagttccat cccgagagcg
     1501 tgctgacacc ggacggtccc gcgctgatcg gcaatttcct caagatgagc gggggcc
//
LOCUS       DATCUD010000042         1647 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21716, whole genome shotgun sequence.
ACCESSION   DATCUD010000042 DATCUD010000000
VERSION     DATCUD010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21716"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIQ99_00590"
     CDS             complement(<1..280)
                     /locus_tag="VIQ99_00590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006411276.1"
                     /note="dGTPase family type 2 subfamily; presumably
                     hydrolyzes dGTP to deoxyguanosine and triphosphate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEY9181661.1"
                     /translation="MSERDAGLAPYAASAASSRGRRHPEPPPALRTEFQRDRDRVIHS
                     TAFRRLVYKTQVFVNYEGDLYRTRLTHSLEVAQIARTVARALRLNEDLV"
     gene            complement(277..1347)
                     /gene="aroB"
                     /locus_tag="VIQ99_00595"
     CDS             complement(277..1347)
                     /gene="aroB"
                     /locus_tag="VIQ99_00595"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011830683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY9181662.1"
                     /translation="METIVVALGARSYPIHIGPGLLGLPVLYGTDARQVCIVTNEIVA
                     PLYLQRVQDALRGRAVETVIVPDGERHKTLATFAAVIDRLVDARFHRDSCLVALGGGV
                     IGDLTGFAAASYQRGVDFVQIPTTLLAQVDSSVGGKTAVNHERAKNMIGAFHQPIAVL
                     ADLDTLATLPPRELSAGLAEVIKYGVIVDAEFFAWLETHIDELRGLDAAALTHAIRRS
                     CEIKAAIVTEDEREHGRRALLNLGHTFGHGLEALGRYERWLHGEAVAIGMALAARTSL
                     ALGWLGPRDVERIERLLTRAGLPTRASGVDPDELLEAMRGDKKADQAGLKLILVEGLG
                     RSVAARSPARAQLRAVLAEQLE"
     gene            complement(1361..>1647)
                     /locus_tag="VIQ99_00600"
     CDS             complement(1361..>1647)
                     /locus_tag="VIQ99_00600"
                     /inference="COORDINATES: protein motif:HMM:NF013375.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEY9181663.1"
                     /translation="LDPKNRERLAATGVVVYLETGIDTLVRRTKTGKSRPLLLGDDPR
                     AVFENLMLVRRPLYEAIADLRVETTGRQVRAVAADLEQRLAGRVAKAGAP"
BASE COUNT          255 a          567 c          560 g          265 t
ORIGIN      
        1 cgacgaggtc ttcgttcaga cgcagagcgc gcgccaccgt gcgggcgatc tgggccacct
       61 cgagcgaatg cgtgagccgc gtccgataca agtcgccttc gtagttcacg aatacctgcg
      121 tcttgtacac gagccgccgg aacgccgtgg agtggatcac acggtcgcga tcgcgctgaa
      181 actccgtgcg cagcgccggc ggcggttcgg ggtggcggcg gccgcgcgag cttgcggcgg
      241 aagcggcgta cggcgcgagc ccggcgtcgc gctcgctcac tcgagctgct cggcgagcac
      301 ggcgcgcaat tgtgccctcg ccggcgatcg agccgcgacc gatcgaccga gcccctcgac
      361 gaggatcagc ttgaggccgg cctggtcggc cttcttgtcg ccgcgcatcg cttcgagcag
      421 ctcgtcggga tcgacgccgc tcgccctcgt cggcaacccc gcgcgcgtga gcaggcgttc
      481 gatgcgctcg acgtctcgcg ggccgagcca gcccagcgcg agcgacgtgc gtgcggccag
      541 cgccattccg atcgcgacgg cctcgccgtg cagccaacgc tcgtagcggc cgagcgcctc
      601 gagcccgtgg ccgaacgtgt gccccaagtt caacagcgcc ctgcggccgt gctcgcgctc
      661 gtcttcggtg acgatcgcgg ccttgatctc gcagctgcgg cgaattgcgt gagtcaaggc
      721 cgcagcatcg agcccacgca gctcgtcgat gtgcgtttcg agccaggcga agaattcggc
      781 atcgacgatg acgccgtact tgatgacctc ggccagtccc gcggacagct cgcgcggcgg
      841 cagcgtggcg agcgtgtcga gatccgcaag cactgcgatc ggctgatgaa acgcgccgat
      901 catgttcttg gcgcgctcat gattgacggc cgtcttgccg ccgaccgacg agtcgacctg
      961 agcgagcagc gtcgtcggga tctgcacgaa gtcgacgccg cgttggtagc tggcggcggc
     1021 gaatccggtt aggtcgccga tcacgccgcc gccgagcgcg acgaggcacg agtcgcgatg
     1081 gaagcgcgca tcgacgagcc gatcgatcac ggccgcaaac gtggcgagcg tcttgtgccg
     1141 ctcgccatcg ggcacgatca cggtttcaac cgcgcggccg cgtaacgcgt cctggacccg
     1201 ctgcagatac agtggcgcca cgatttcgtt cgtgacgatg cacacctggc gggcgtccgt
     1261 gccgtacagc accggtagcc caagcagtcc cggccctatg tggatcgggt agctgcgcgc
     1321 gccgagcgcg acgacgatgg tttccacgcg ccgaaggttc tcagggcgcg ccggcttttg
     1381 caacgcggcc cgcgagtcgc tgctcgagat ctgcggcaac ggctcgtacc tgccggccgg
     1441 tcgtttccac acggaggtcc gcaatggcct cgtacaacgg ccggcggacc agcatcaggt
     1501 tctcgaacac cgctcgcggg tcgtcaccga gcaagagcgg tcggctctta cccgtcttcg
     1561 tgcggcgcac cagcgtgtcg atgccggtct cgaggtacac cacgacaccg gtcgctgcca
     1621 gccgctcgcg atttttcgga tccagga
//
LOCUS       DATCUD010000043         1628 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85652, whole genome shotgun sequence.
ACCESSION   DATCUD010000043 DATCUD010000000
VERSION     DATCUD010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85652"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /gene="glgP"
                     /locus_tag="VIQ99_00605"
     CDS             <1..850
                     /gene="glgP"
                     /locus_tag="VIQ99_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013032725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-glucan family phosphorylase"
                     /protein_id="HEY9181664.1"
                     /translation="AQRLYPEHRVGAITNGVHPSTWASPAFARLYDSRLAGWRLEPER
                     LMRAEVALADDEVWRCHTEAKRALIDRVHAAAGVELDPDLPLIGYARRMTQYKRPELF
                     FTDVERLRSIAARQPFQAVFAGKAHPQDQGGKEAIERLHQWMREVASSIRIAFLPDYT
                     MATALAMVSGADVWLNTPQPPLEASGTSGMKAALNGVPNLSVLDGWWVEGHMEGITGW
                     AIGNGDRQSSDAASLYDKLEHVVLPLYRVKSDWIRIMKGAISRNASLFHSHRMMRRYA
                     ADAYFG"
     gene            complement(861..>1628)
                     /locus_tag="VIQ99_00610"
     CDS             complement(861..>1628)
                     /locus_tag="VIQ99_00610"
                     /inference="COORDINATES: protein motif:HMM:NF025873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY9181665.1"
                     /translation="AQTLESLPQDARAVVAARGLSGLTELPFIGEGIAQAIVEIVKTG
                     RLARLDRLRGAAEPEAQLRMVPGIGAALAKRIHDTLDIDTLEALEQAAWDGSLETLDG
                     IGARRLAAIRAGAASLLGRPTARHAPENDAPSVATLLDVDAEYRRAAAANELPMLAPR
                     RFNPTHKAWLPVLHTDRGEWHFTALYSNTARAHQLGRTRDWVVLYFYDSHHREAQRTV
                     VTETHGPLQGRRVVRGSEADCAAYYGSSEYRVTTLSA"
BASE COUNT          264 a          532 c          564 g          268 t
ORIGIN      
        1 cgcgcagcgg ctctatcccg agcatcgcgt gggggcgatc acgaacggag ttcatccgtc
       61 cacgtgggcg agcccggcgt tcgcgcgtct gtacgactca cgtctcgccg gctggcgcct
      121 cgagcccgag cggctcatgc gcgccgaggt tgcactcgcc gacgatgagg tttggcgctg
      181 tcacacggag gcgaaacggg cgctgatcga tcgcgtgcac gcggctgccg gcgtcgagct
      241 cgaccccgat ctcccgttga tcggctacgc gcggcgcatg acgcagtaca aacggcccga
      301 gcttttcttc acggacgtgg agcgcttgag atcgatcgcg gcgcggcagc cgtttcaagc
      361 cgtgttcgcc ggcaaggcgc atccgcagga ccaaggcggc aaggaagcga tcgagcgttt
      421 gcaccaatgg atgcgcgagg tcgcgagctc gattcgtatc gcgttcctac ccgactacac
      481 gatggcgacg gcgcttgcga tggtctcggg ggccgacgtc tggctcaaca cgccgcagcc
      541 gccgctcgag gcgtccggca cgagcggcat gaaagcggca ttgaacggcg tgccgaactt
      601 gagcgtgctc gacggctggt gggtcgaagg tcacatggaa gggatcacgg gttgggcgat
      661 cggcaacggg gaccgccaaa gctccgacgc cgcgtcgctc tacgacaagc tcgagcacgt
      721 cgtgctgccg ctttaccgag tgaaaagtga ctggatcagg atcatgaagg gcgcaatctc
      781 gcgcaacgcg tcgttgttcc acagccatcg aatgatgcga cgttacgccg ccgacgcgta
      841 tttcggctga caggccgagg ctacgccgaa agcgtcgtca cccggtattc ggacgatccg
      901 tagtacgcag cacagtcggc ttcgctgccg cggacgacac gccggccctg gagcgggccg
      961 tgggtttcgg tcacgacggt ccgctgcgct tcgcgatggt ggctgtcgta gaagtagagc
     1021 acgacccaat cccgtgttcg gcccaactga tgtgcgcgcg ccgtgttcga atacagcgcc
     1081 gtgaagtgcc attcgccgcg atcggtgtgt agtaccggca gccacgcctt gtgcgtcgga
     1141 ttgaagcgcc gcggcgccag catcggcagc tcgttcgccg ccgcggcacg ccggtactcg
     1201 gcgtcgacgt cgagcagtgt cgcgaccgaa ggcgcatcgt tttcgggtgc gtgacgcgcg
     1261 gtcggtcggc cgagcaggct cgccgcgccc gcgcggatcg ccgcgagacg ccgtgcaccg
     1321 atgccatcga gcgtctcgag gctcccatcc caagcggctt gctcgagcgc ctcgagcgta
     1381 tcgatgtcga gtgtgtcgtg aatgcgtttc gcgagcgccg cgccaatgcc ggggaccatg
     1441 cggagctgcg cttcgggctc ggccgcaccg cgcaggcgat cgagccgcgc aagccggccg
     1501 gtcttcacga tctccacgat cgcttgcgcg atgccctcgc cgatgaacgg cagctcggtg
     1561 aggccgctga ggccgcgagc cgcgacgacg gcacgcgcat cctgcggcag ggactcgagc
     1621 gtctgcgc
//
LOCUS       DATCUD010000044         1573 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43018, whole genome shotgun sequence.
ACCESSION   DATCUD010000044 DATCUD010000000
VERSION     DATCUD010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43018"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..973
                     /locus_tag="VIQ99_00615"
     CDS             <1..973
                     /locus_tag="VIQ99_00615"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181666.1"
                     /translation="SEDPAYQPLYRFWRPRFWSAWAFYLWLRFTALLPLRAALSLYRS
                     IGRIIYRVASRQRRTVRRNLEICFPELSAEAREQLVRRHFESLGMSIAECAFAWFASD
                     RRLARCFTIHGLEHLKRALERGKGVILYTGHFATIEICGRPLKHATPLFACMFSRRSN
                     ELLDEVQRRGRMREAHEAVPSDNVRAMIRSLRRNAAVSYAPDQTYLEGELVPFFHELA
                     MTNVATGKLARLTGAVVLPFAYRRTDSKGRYELTLHPPLDDFPTDDPAADTRRLVRYL
                     EAFIRAAPEQYQWMHRRFKGRPAPLPDLYNTEGAVHVTQPSADTSVS"
     gene            981..>1573
                     /locus_tag="VIQ99_00620"
     CDS             981..>1573
                     /locus_tag="VIQ99_00620"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY9181667.1"
                     /translation="MSPRVSVVVPLNNEQANVEPLLDELREALRGLDPYEIIVVDDGS
                     TDGTAAEIRRIGHETCGIRLLRHDTQRGQSTAIYNGVYAARADVVVTLDGDLQNHPGD
                     IPPLLDRFSADPTPDNLGLLIGHRTKRRDSLIRRVSSVIANTVRARVLHDDTPDTGCG
                     LKVFRRSVFMRLPYFDHMHRFLPALMLRAGYRVKSVAV"
BASE COUNT          264 a          519 c          481 g          309 t
ORIGIN      
        1 ctccgaggac ccggcgtacc agccgctcta tcggttttgg cgcccgcgtt tttggtccgc
       61 gtgggcgttc tatctgtggc ttcgattcac ggcattgctg ccgctgcgcg cagcgctgtc
      121 cctgtaccgc agcatcggcc gcatcatcta tcgagtggca tcgcgccaac gacgaacggt
      181 ccggcgcaac ctcgagatct gtttcccgga gctctccgcg gaggcgcgcg agcagctcgt
      241 gcgacgccat ttcgaatcct tgggcatgtc gatcgccgag tgtgcgttcg cttggttcgc
      301 gtccgatcga cgcctcgccc gctgcttcac gatccacggg ttggagcact tgaaacgcgc
      361 gctggaacgc ggcaagggtg taatccttta cacgggccat tttgcgacga tcgagatctg
      421 cgggcgcccg ctgaagcacg cgacgccgtt gttcgcttgc atgttcagcc gtcgcagcaa
      481 cgagctgctc gacgaggtgc aacgccgggg ccgtatgcgc gaggcccacg aggccgttcc
      541 gagcgacaac gtgcgcgcga tgattcgcag cttgcggcgc aatgcggcgg tctcgtacgc
      601 gccggaccag acctacctcg aaggcgaatt ggtaccgttc tttcacgagc tcgccatgac
      661 gaacgtcgct actggcaagc tagcccggct caccggtgcc gtggtgttgc cgttcgcgta
      721 ccggcgcacc gattccaaag gtcgctacga gctgacgctg catccgccgc tcgacgattt
      781 cccgaccgac gatcctgccg cggacacgcg gcgactcgtt cgctaccttg aagcctttat
      841 ccgcgccgcg cccgagcaat accaatggat gcaccggcgc ttcaagggtc gccccgcacc
      901 gcttccggat ctgtataaca ccgagggagc ggtacacgtt acgcagcctt cggccgacac
      961 gagtgtgagc taggtgcacg atgtcgccgc gcgtctccgt agtagtgcca ctgaacaacg
     1021 agcaggcgaa cgtagagccg ctgctcgacg agctgcgcga ggcgctgaga gggctcgacc
     1081 cctacgagat catcgtcgtc gatgatggca gcaccgacgg aacggccgcc gagattcgtc
     1141 gtattggtca tgagacctgc ggtatccgcc tactgcgcca tgacacgcaa cgcggtcaaa
     1201 gcacggcgat ctacaacggc gtctacgcgg cgcgtgccga tgtcgtcgtc acgctcgacg
     1261 gcgacttgca gaaccatcca ggcgacattc cgccgctgct cgaccgtttt tccgcggatc
     1321 cgacgcccga caacctcggc ttgctgatcg gccatcgcac gaaacgccgc gattctctga
     1381 ttcgtcgggt gtcatcggtg atcgccaaca cggttcgtgc gcgcgtgcta cacgacgaca
     1441 ctccggacac cggctgcggc ctaaaggtct ttcgacggtc ggtgttcatg cggttgccgt
     1501 attttgacca catgcatcgt ttcttgccgg cattgatgct gcgcgccggc tatcgcgtga
     1561 agtcggtcgc cgt
//
LOCUS       DATCUD010000045         2816 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85676, whole genome shotgun sequence.
ACCESSION   DATCUD010000045 DATCUD010000000
VERSION     DATCUD010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2816)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2816)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2816
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85676"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..639)
                     /locus_tag="VIQ99_00625"
     CDS             complement(<1..639)
                     /locus_tag="VIQ99_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181668.1"
                     /translation="MILRFALALGVTGFVAGFFGPIALNPEANQGPLLGIFITGPLGA
                     LAGLALGTLFRFLPVTDAFRHRALALLCAALGIGTLYACLPEPAVRGHVIEAHLEACA
                     SPAQAFATSLAEWEDAVERVTWATPPANWKDTARRNVERDTGAVVTMRVTRRASIYEH
                     RKPWNSGRKTAGPWVTVDEAERYYVGDAGTACAAYAARGRELYTPFSDSTYDS"
     gene            complement(685..1536)
                     /locus_tag="VIQ99_00630"
     CDS             complement(685..1536)
                     /locus_tag="VIQ99_00630"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9181669.1"
                     /translation="MQRTLGNTGLAVEAIGLGGMPLSIQNRPDEQTARSVIAAFVAGG
                     GNHIDTAISYCLDDDDFGHNERLIATTLKELGHADVVVATKGGLTRPGGRWDVDCSPK
                     WLRRCCEQSARTLGAPLALYYLHTVDPRVPLADSVGELVRLRDEGKIARIGLSNVTAG
                     HLEEALRLTPIAAVQNRCNVLDRRDFENGLVERCRALGIAYVPYSSVGGHGGHRRLKQ
                     YPVLARIAAKHSTTIYAIALKWLLAKGPHILPIPGATKISSVENSLSAEHVLLDSDDL
                     AALDALS"
     gene            1584..2672
                     /locus_tag="VIQ99_00635"
     CDS             1584..2672
                     /locus_tag="VIQ99_00635"
                     /EC_number="5.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalomesaconate tautomerase"
                     /protein_id="HEY9181670.1"
                     /translation="MQTAIPCFLMRGGSSKGLYFRKEDLPADEALRDRVLVAAVGSDS
                     RQIDGAGGAHPLTSKVAVVSRSESKDTDIDYLFVQVVVGEGRVDTTPNCGNILAGVAP
                     FAIENGLVEARAGITPVRVRMLNSDNLCELLIETPGKRVNYDGNAKIDGVPGTAAPIV
                     CNYLDVAGSATGALLPTGHVRDVVGGVEITCIDNGMPVVVLRARDLGVSGYETPKELD
                     ANKTLKAKIESIRLQIGPKMNLGDVTKKVVPKMSLIAPARAGGHVCTRTFIPHDCHAA
                     IGVLGAVSVATACILPGSVTEGVATVPEGAVKQMSVEHPTGEFSVTLEVGGTREQPTV
                     QKAVLLRTARLIMRGEVFVPASIWDGSR"
     gene            2678..>2816
                     /locus_tag="VIQ99_00640"
     CDS             2678..>2816
                     /locus_tag="VIQ99_00640"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018976925.1"
                     /note="catalyzes the formation of
                     tetrahydropteroyl-L-glutamate and methionine from
                     L-homocysteine and
                     5-methyltetrahydropteroyltri-L-glutamate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /protein_id="HEY9181671.1"
                     /translation="MSSRAPFRADQVGSLLRPAALKEARQRHAAGELDAVGLAAVEDR
                     EI"
BASE COUNT          450 a          943 c          989 g          434 t
ORIGIN      
        1 tgagtcgtac gtcgagtcgc tgaacggcgt gtagagctcg cgaccgcgcg ccgcgtacgc
       61 ggcgcacgcc gtgcctgcgt cgccgacgta gtagcgctcc gcctcgtcga ccgtgaccca
      121 cggtccggcg gtcttacggc cggagttcca cggcttgcga tgctcgtaga tcgacgcgcg
      181 ccgcgtcacg cgcatcgtca caaccgcccc cgtgtcgcgc tcgacgttgc gacgcgccgt
      241 gtccttccag ttcgcgggcg gagtggccca ggtcacgcgc tcaacagcgt cttcccactc
      301 ggcgagcgag gtcgcgaacg cttgtgccgg cgacgcgcat gcctcgaggt gcgcctcgat
      361 cacgtgacct cgcacggccg gctccggcag gcaagcatac agcgtgccta tgccgagggc
      421 ggcgcaaaga agtgccagcg cgcggtgccg gaacgcgtcc gtcacgggca ggaaccggaa
      481 cagcgtgccg agcgcgagac ccgcgagcgc accgagcggc cccgtgatga agatgccgag
      541 cagcggcccc tgattcgcct ccggattcag cgcgatcggt ccgaagaatc cggcgacgaa
      601 cccagtcaca ccgagcgcga gcgcgaacct caagatcatg ggctgcagcc tgcaccagcg
      661 tcccggcgca ggacgtgatc gcgctcacga aagcgcgtcg agcgccgcga ggtcgtccga
      721 atcgagaagc acgtgctcgg ccgacaagct gttctcgacg ctgctgatct tcgtggcgcc
      781 cggaatcggc aggatgtgcg ggcctttcgc gagcagccac ttcagcgcga tcgcgtagat
      841 cgtcgtcgaa tgtttcgcgg caatccgcgc gagcacggga tactgcttga ggcgccgatg
      901 tcccccgtgc ccgccgaccg acgagtaggg cacgtacgcg atgccgagcg cgcggcatcg
      961 ctcgacgagc ccgttctcga aatcgcgtct gtcgagcacg ttgcagcggt tctgcactgc
     1021 cgcgatcggg gtcaaccgca gcgcctcctc gaggtgaccc gcagtcacgt tcgagaggcc
     1081 gatccgcgcg atcttgccct cgtcgcgcag gcgcacgagc tcgccgaccg agtccgcgag
     1141 cggcacgcgc gggtccacgg tatgcaggta atacagcgcg agcggcgcgc ccagcgtgcg
     1201 cgcgctctgc tcgcagcagc ggcgcagcca cttcgggctg cagtcgacgt cccaccggcc
     1261 gccgggccgc gtgagcccac ccttcgtcgc gacgacgacg tccgcatggc cgagctcctt
     1321 cagcgttgtc gcgatcaggc gttcgttgtg gccgaagtcg tcgtcgtcga ggcaatagct
     1381 gatcgccgtg tcgatgtggt tgccgccgcc ggccacgaac gctgcgatca cgctgcgtgc
     1441 cgtctgctcg tcggggcgat tctggatcga cagcggcatg ccgcccaagc cgatggcttc
     1501 gaccgcaaga cccgtgttgc cgagggttcg ctgcatgaag ggagtgtagc agcggcccgc
     1561 gcgcgcgccg taccataccg gccatgcaaa cagcgatccc gtgtttcttg atgcgcggcg
     1621 gcagctcgaa ggggctgtat tttcgcaagg aagatctgcc ggccgacgag gcgttacgcg
     1681 accgagtgct cgtggccgcg gttggtagcg attcgcggca gatcgacggc gcgggcggcg
     1741 cgcacccgct cacgagcaag gtcgcggtcg tgagccgctc ggagtcgaag gacaccgaca
     1801 tcgactatct gttcgtgcag gtggtcgtcg gcgaggggcg tgtcgacacg acgccgaact
     1861 gcggcaacat cctggccggc gttgcgccgt tcgcgatcga gaacggcttg gtcgaagccc
     1921 gcgctgggat cacgccggtg cgggtgcgga tgttgaacag cgacaacctc tgcgagctct
     1981 tgatcgagac gccgggcaag cgcgtgaatt acgacggcaa cgcgaagatc gacggcgtgc
     2041 ccggcacggc cgcgccgatc gtctgcaatt acctcgacgt cgcgggctcc gcgaccggcg
     2101 cgctgttgcc gaccggccac gtgcgcgacg tcgtcggcgg cgtcgagatc acgtgcatcg
     2161 acaacggcat gccggtcgtc gtgctgcgag cgcgcgacct cggtgtctcg ggctacgaga
     2221 cgccgaagga gctcgacgcg aacaagacgc tgaaggccaa gatcgaatcg attcggttgc
     2281 agatcggtcc gaagatgaat ctcggtgacg tcacgaagaa ggtcgtgccg aagatgagcc
     2341 tgattgcgcc ggcgcgcgcg ggcggccacg tgtgcacgcg cacgttcatc ccgcacgatt
     2401 gccacgccgc gatcggcgtg ctcggcgccg tgtcggtcgc gaccgcgtgc atcctgccgg
     2461 gctccgtgac cgaaggggtc gccacggttc cggagggcgc cgtgaagcag atgtcggtcg
     2521 agcacccgac cggcgagttc tcggtgacgc tcgaggtcgg cggtacgcgc gagcagccaa
     2581 ccgtgcagaa ggccgtattg ctgcgtacgg cgcggctgat catgcgcggc gaggtcttcg
     2641 tgccggcgtc gatctgggac ggcagccgct gacgccgatg tcgagccggg caccgtttcg
     2701 cgccgaccag gtcggcagct tgctgcgtcc cgcggcgctg aaggaagcgc ggcagcgaca
     2761 cgcggccggc gagctcgatg cggtcggcct cgccgccgtc gaagatcgcg agatcg
//
LOCUS       DATCUD010000046         2623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92808, whole genome shotgun sequence.
ACCESSION   DATCUD010000046 DATCUD010000000
VERSION     DATCUD010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2623
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92808"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2015)
                     /locus_tag="VIQ99_00645"
     CDS             complement(<1..2015)
                     /locus_tag="VIQ99_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY9181672.1"
                     /translation="MSSISMGTSDVDWHRLSAAESLHRLKSRPAGLSPEESANRRAEY
                     GFNVIDEAPPRSPYLMFAAQFADYMILVLVGAAIASGIVGDIADALVIVAIIVLNAIV
                     GFVQEFRAERALAALKAMTAPVATVLRAGSPRAEPAAHLVPGDIVRVEAGSIVPADLR
                     ILESASLRVDEAALTGESVPVDKAHAAIHETDVAVADRRNIAHKGTLVTYGRGLGLVV
                     ATGMRTEFGKIARLLHQARLVETPLQRRLAVFGRRLALIVLAICTIVFASGLMRGEPA
                     LPMLLTAVSLAVAAIPEALPAVVSIALALGARKMMRQHALIRRLPAVETLGSVTTICS
                     DKTGTLTANEMRLERYYCDGAVADSPGVTEPWRLLELALTVSHDAVRDDAGQFSGDPT
                     EVALFRAALAAGSDPAREMARWPRVDEIPFDSVRKCMSTLHRTPEGEWLSIAKGAAEV
                     IVNGCDAVALGPNRLPIERADLLAQADRFAAEGLRVLAVAVRNFTERPEPYDSAVAER
                     NLVFLGFVGLIDPPRPETMAAIATCHSAGIVPVMITGDHQLTARAIAKRVGLVADDRA
                     VITGAALARLSPAELAERVRELRVYARVSPEQKLAIVAALQGRGEVVAVTGDGVNDAP
                     ALRQADIGVAMGIAGTDVAKEVSGMVLLDDNFATIVGAVREGRRIYD"
     gene            complement(2012..>2623)
                     /locus_tag="VIQ99_00650"
     CDS             complement(2012..>2623)
                     /locus_tag="VIQ99_00650"
                     /inference="COORDINATES: protein motif:HMM:NF021645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoPQ-activated protein PqaA family protein"
                     /protein_id="HEY9181673.1"
                     /translation="GEPLRQIIDPYRYRAHLTQPKLVMLATNDEYFPLDSANLYWDEL
                     EEPKRLLYLPNQPHGIDDVEPVVRGLRALHAAAGDGKPLPQLDWEYRWGDTVTLCIHS
                     DEARLLRVWQAVSPGRDFRAAVWQPAAISKRSSGRFEIAHPAGGYVAVFGEATFGRGR
                     AAFMLSTNVAIIAAPPEPAYGTEPRGTPGICEALGVDGPVAVR"
BASE COUNT          454 a          920 c          854 g          395 t
ORIGIN      
        1 ttgtcgtaga tgcgtcgacc ttcccgcacc gcgccaacga tcgtcgcgaa gttgtcgtcg
       61 agcagcacca tgccgctgac ttctttcgcg acgtccgtgc ccgcgatgcc catggctacg
      121 ccgatgtccg cctgccgaag cgcgggtgcg tcgttgacgc cgtcccccgt gacggcgaca
      181 acctcgccgc gcccctgtag cgccgccacg atcgcgagct tctgctccgg agagacgcgc
      241 gcatacacgc gcagctcgcg cactcgctcg gccaactcgg ccggtgaaag ccgcgcgagc
      301 gcagcaccgg tgatcaccgc gcgatcgtcc gcaacgagac ccacgcgctt cgcgatcgct
      361 cgagccgtca gctgatgatc gcccgtgatc atcaccggca cgatgccggc gctgtggcaa
      421 gttgcgatag cggccatggt ctcgggccga ggcggatcga tcaacccgac gaagccgagg
      481 aacacgaggt tccgctccgc gactgcggaa tcgtagggct ctggacgctc cgtgaaattc
      541 cggacggcca cggccaacac acgcaagcct tcggccgcga aacgatccgc ctgcgcgagc
      601 aggtccgcgc gctcgatcgg cagcctattc gggccgagcg caacggcgtc acaaccattt
      661 acgatcacct cggccgcacc cttcgcgatc gacagccact cgccttccgg cgtgcgatgc
      721 aacgtgctca tgcatttgcg caccgaatcg aagggaatct cgtcgactcg cggccagcgc
      781 gccatttccc gcgccgggtc cgaaccggcc gcgagcgccg cgcgaaacaa cgcaacttcg
      841 gttgggtcgc ccgaaaactg gcccgcgtcg tcgcgtactg cgtcgtgact gacggtcagc
      901 gcgagctcga gcagtctcca cggctctgta acccccggcg aatcggcgac tgcgccgtcg
      961 caataatacc gctcgagccg catctcgttc gccgtcaacg tgcccgtctt gtcggagcag
     1021 atcgtcgtca cggagccgag tgtttcgact gccggaagcc gccgaatcaa cgcgtgctgc
     1081 cgcatcatct tgcgagcacc cagcgcgagc gcgatgctca cgacggccgg cagcgcctcg
     1141 ggaatcgctg cgaccgcgag gctgacagcc gtcagcaaca tcggcaacgc cggctcgccg
     1201 cgcatgaggc ccgaggcgaa gacgatcgtg cagatcgcga gcacgatcag agccaagcgc
     1261 cggccgaaca ccgccaggcg ccgttgcagc ggcgtctcga cgagccgtgc ctgatgcaag
     1321 agccgtgcga tcttgccgaa ttcggtgcgc atgcccgtcg cgacgacgag ccccaagccg
     1381 cgaccgtacg tcacgagggt gcccttgtgc gcgatgttgc ggcgatccgc gacggcaacg
     1441 tcggtctcgt ggatcgcggc atgcgccttg tcgaccggca ccgactcgcc ggtcagagcg
     1501 gcctcgtcga cgcgcaggct cgccgactcg aggatgcgca agtcggccgg cacgatgctg
     1561 cccgcctcga ctcggacgat atcgccgggg acgagatgcg cagccggctc cgcgcgcgga
     1621 ctcccggccc gcagcaccgt tgcgaccggt gccgtcatcg ccttgagggc cgcgagcgcg
     1681 cgctcggcac gaaactcctg cacgaagccc acgatggcgt tcaacacgat gatcgcgacg
     1741 atcacgagcg cgtccgcgat gtcgccgacg atgccggagg cgattgcggc gccgacgagc
     1801 accaggatca tatagtcggc gaactgcgcg gcgaacatca ggtacggtga acgcggcggc
     1861 gcttcgtcga tgacgttgaa tccatactcg gcgcgccgat tcgcgctttc ctcgggcgag
     1921 agacctgccg gccggctctt cagtcggtgc aacgactcgg cagcggagag gcggtgccaa
     1981 tcgacgtcgc tcgtgcccat cgagatcgag ctcaccgcac cgcaacgggg ccgtcgacgc
     2041 cgagggcctc gcagatgcca ggcgtgccgc gcggctcggt gccgtaagcg ggctcgggcg
     2101 gcgccgcgat gatcgcgaca ttcgtcgaca gcatgaaagc cgcgcgtccc ctgccgaagg
     2161 tggcctcgcc gaataccgcg acgtagccgc cggcgggatg cgcgatctcg aagcggccgc
     2221 tcgaacgctt ggagatggcg gccggctgcc agacggcggc acgaaaatcg cgcccgggcg
     2281 agacggcttg ccacactcgc agcaaccggg cttcgtccga gtggatacag agtgtcaccg
     2341 tgtcgcccca acggtattcc caatccagct gcggcaacgg cttcccgtcc cctgcggcgg
     2401 catggagcgc gcggaggccg cggacgactg gctcgacatc gtcgataccg tgcggctggt
     2461 tcggcagata caacaaccgc ttcggctctt ccagctcgtc ccagtacaga ttggccgaat
     2521 cgagcgggaa gtattcatcg ttcgtcgcga gcatcacgag cttcggctgc gtgaggtggg
     2581 cgcgatagcg atagggatcg atgatctgcc gcaacggctc gcc
//
LOCUS       DATCUD010000047         3748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_57262, whole genome shotgun sequence.
ACCESSION   DATCUD010000047 DATCUD010000000
VERSION     DATCUD010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57262"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VIQ99_00655"
     CDS             complement(<1..544)
                     /locus_tag="VIQ99_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014403427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HEY9181674.1"
                     /translation="MAARKWLPGPAGARALDARDELAPFRREFELPREQGRTLTYLCG
                     HSLGLMPRATRRVVNAEMDRWAVLGVDGHFADARPPRGRPRPLRGAHGGWLDYHTQFA
                     APLAALVGAYRDEVVAMNTLTVNLHLMLATFFRPTKERYKILIERDAFSSDRYAIESQ
                     LKWHGLEPSTALLELKFRPGG"
     gene            complement(547..1059)
                     /locus_tag="VIQ99_00660"
     CDS             complement(547..1059)
                     /locus_tag="VIQ99_00660"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008208248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HEY9181675.1"
                     /translation="MKITMPFKLLDWIDDNREHLKPPVCNKQMFESGDFIVQVVGGPN
                     SRTDYHVDEGPELFYQVEGEMLLKTVQDGAFVDIPIREGEIFLLPPRVPHSPQRFRNT
                     VGVVVERTRAAHELDGFLWFCTKCANKLHEEYLHVSDIVKDLPPVFDRFYGSVEARTC
                     KRCGTVMPSR"
     gene            complement(1103..1873)
                     /gene="rsmA"
                     /locus_tag="VIQ99_00665"
     CDS             complement(1103..1873)
                     /gene="rsmA"
                     /locus_tag="VIQ99_00665"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005244355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEY9181676.1"
                     /translation="MRAKKRLGQHFLHDPAVIRRLVDAIRPRHDDTMVEIGGGPGALT
                     APLVEKLDRLHVVEVDRELAAALPGRVAHPERLVVHAEDALRFDFGALATEPRSLRVV
                     GNLPYNISTPLLFHLSSFGNAIKDLHVMLQREVVERMTASPGGKAYGRLTVMLGLWAK
                     CEVCFHVGPGAFSPPPKVWSTVVRLTPHESAPFVVRDRQRFAALVAHLFSMRRKTLGR
                     ALKGRLTPQQIAAAGIDPGARPETLAPADFATLSALEQ"
     gene            complement(1881..2834)
                     /gene="pdxA"
                     /locus_tag="VIQ99_00670"
     CDS             complement(1881..2834)
                     /gene="pdxA"
                     /locus_tag="VIQ99_00670"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY9181677.1"
                     /translation="MSSGEPAGIGPDISLALSIRPFAARIAVLGDPDLLAQRARLLDQ
                     RVELKPCADLTALGTHRPGSLHIIPIALAAPATPGTLDTRNAAYVLTMLRRATELCVA
                     GAAQALVTAPVQKSVITRSGVAFSGHTEFLAELTGARQPVMLLTGNKLRVALATTHLP
                     LRDVAAALDRNKLVSSIRILDGDLKRRFRIPKPRLLVLGLNPHAGESGTLGTEEQDVI
                     EPAIRTLTAEGLDVRGPVSADTAFTPESLRGCDAVVAMYHDQGLPALKALSFGEIVNV
                     TLGLPIVRTSVDHGTALSLAGTGRARPDSLFAAVELALQLV"
     gene            complement(2906..>3748)
                     /locus_tag="VIQ99_00675"
     CDS             complement(2906..>3748)
                     /locus_tag="VIQ99_00675"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9181678.1"
                     /translation="VIARIAITPREIDQCLADTDASATNEFDYNISHILIAIPANATQ
                     ADVEAARRRIEDIHARLVAGEEFAQLAIQVSQAQTALEGGSLGWRKGSQLPTLFADVV
                     VRMQPGEFSEPLQSSGSFQIVRLNEMRGAERTMVDQLHARHILLRPNEILDDDATKQK
                     MIGVRAQIVGGDDFATVARAVSDDTASATDGGDLGWLSPGDTVPEFEQVMAELPIGQL
                     SEPIKSRYGWHLIEVLERRSYDTTDENKRATCVRQIRAAKAEEERELWLRRLRAQAYV
                     DIRQ"
BASE COUNT          595 a         1260 c         1292 g          601 t
ORIGIN      
        1 agccgccggg gcggaacttg agttcgagca gcgccgtgct cggctcgagg ccgtgccact
       61 tcagctgcga ctcgatcgca tagcggtccg acgagaacgc gtcgcgctcg atcaagatct
      121 tgtagcgctc cttcgtaggc cggaaaaacg tcgcgagcat caggtgcaag ttcaccgtca
      181 gcgtgttcat cgcgacgacc tcgtcgcgat aggcgccgac gagcgcggcg agcggcgccg
      241 cgaactgggt gtggtagtcg agccagccgc cgtgcgcccc gcgcagcggc cgcggccggc
      301 cgcgcggcgg gcgcgcgtcg gcgaaatgac cgtcgacgcc gagcacggcc cagcgatcca
      361 tctcggcgtt cacgacgcgg cgcgtcgcgc gcggcatgag accgagcgag tggccgcaca
      421 agtaggtcag tgtgcggccc tgctcgcgcg gcagctcgaa ctcgcgccga aagggggcga
      481 gctcgtcccg cgcatcgagt gcacgcgcac cggccgggcc cggcaaccac ttcctcgcgg
      541 ccacggctac ctcgacggca tcacggtgcc gcagcgctta caggtgcggg cttcgacact
      601 gccgtagaaa cggtcgaata ccggcggcag gtctttgacg atgtcggaca cgtgcaggta
      661 ttcctcgtgc agcttgttcg cgcacttcgt gcagaaccac aggaacccgt cgagctcgtg
      721 cgcggcgcgc gtccgctcga cgaccacgcc cacggtattg cggaagcgtt gcggcgagtg
      781 cggcacgcgc ggcggcaaca ggaagatctc gccttcgcgg atcgggatgt cgacgaacgc
      841 gccgtcctgc acggtcttca gcagcatctc cccttcgacc tgatagaaca gctcgggccc
      901 ctcgtcgacg tggtaatcgg tgcgcgagtt cggcccgccg acgacctgca cgatgaaatc
      961 gccgctttcg aacatctgct tgttgcagac cggcggcttc aagtgctcgc ggttgtcgtc
     1021 gatccaatcg agcagcttga acggcatcgt gattttcatg agagcaatta tgccgtggtc
     1081 ggcgctcgga cggcgtgtgt attcactgct cgagcgccga cagcgtggcg aagtccgccg
     1141 gggccagcgt ctcggggcgt gcgccggggt cgatgccggc ggcggcgatc tgctgcggcg
     1201 tgagccgccc tttgagcgcg cggcccagcg tcttgcgccg catcgagaac aggtgtgcga
     1261 cgagcgcggc aaagcgctgt cgatcgcgca cgacgaacgg cgcggactcg tgcggcgtca
     1321 agcgcacgac cgtcgaccag accttcggcg gcggagagaa tgcgccgggc ccgacgtgaa
     1381 agcagacctc gcatttcgcc cacagcccga gcatcacggt gagccggccg taagccttgc
     1441 cgccgggaga ggccgtcatg cgctcgacga cctcgcgctg cagcatcacg tgcaggtcct
     1501 tgatggcgtt gccgaagctc gagagatgga atagcagcgg cgtggagatg ttgtacggca
     1561 agttgccgac gactcgcagc gagcgcggtt cggtcgccag tgcgccgaag tcgaagcgca
     1621 gcgcgtcttc cgcgtgaacg acgagtcgct caggatgtgc gacacggccc ggcaatgcgg
     1681 ccgcaagctc gcgatcgacc tcgacgacgt ggagccggtc gagcttctcg acgagcggag
     1741 ccgtcagcgc tccgggcccg ccgccgatct cgaccatcgt atcgtcgtgt cgtgggcgga
     1801 tggcgtcgac gagccggcgg atcacggcag ggtcgtgcag gaaatgctgg ccgagccgtt
     1861 tcttcgcgcg caccggcggc tcagacgagt tgcagcgcga gctcgaccgc cgcgaacagg
     1921 ctatcgggcc gcgcgcggcc cgtgcccgcg agcgacaacg ccgtgccgtg atcgaccgag
     1981 gtccgcacga tcggcaagcc cagtgtcaca ttgacgatct cgccgaacga cagcgctttc
     2041 aacgccggca gcccttgatc gtgatacatc gcgaccacgg cgtcgcaacc tcgcagcgac
     2101 tccggcgtga acgcggtgtc ggcggacacg gggccgcgca cgtcgagccc ttcggcggtg
     2161 agcgtgcgaa tcgccggctc gatgacgtct tgctcctcgg tgccgagcgt gccgctctcg
     2221 ccggcgtgcg ggttcagtcc gagcaccagc agccgcggct tcgggatccg aaaacgccgt
     2281 ttcagatcgc cgtccaggat ccggatcgag ctcacgagct tgtttcggtc caacgccgcc
     2341 gcgacgtcgc gcaacggcag atgcgtcgtc gcgagcgcca cgcggagctt gttgccggtc
     2401 aacagcatca cgggctgccg cgcccccgtg agctcagcca agaactccgt gtgccccgag
     2461 aatgcgacgc ccgaacgcgt gatcacgctc ttttgcacgg gtgcggtcac gagcgcctgt
     2521 gcggcgcccg cgacgcagag ctccgtcgcg cgccggagca tcgtcagcac gtaggcggcg
     2581 ttacgtgtgt cgagcgttcc gggcgttgcg ggtgccgcca acgcgatcgg gattatgtgc
     2641 agcgagcccg gccggtgcgt tcccaatgcg gtgaggtcgg cacacggctt caactcgacg
     2701 cgctgatcga gaaggcgcgc gcgctgggcg agcagatccg gatccccgag cacggcaatc
     2761 cgcgctgcga acgggcggat gctgagcgct agcgagatgt cgggaccgat gccggccggc
     2821 tcgccggagc tcacgacgac gaccggtgcg gtcgcgctcg cgacgcgacg ccgaccgcgg
     2881 ccgggcccgg cgccccgccg tgcgcctatt ggcgaatgtc gacgtacgct tgggcgcgca
     2941 ggcggcgcaa ccacagctcg cgctcttctt cggccttggc ggcgcggatc tggcgcacgc
     3001 acgtcgcgcg cttgttctcg tcggtcgtgt cgtaggagcg gcgctcgaga acctcgatca
     3061 agtgccaacc gtagcgggac ttgatcggct cgctgagctg accgatcggc agctccgcca
     3121 tgacctgctc gaactcgggc accgtatcgc ctggggacag ccagccgaga tcgccgccat
     3181 cggttgcgga cgcggtgtcg tcggacacgg cgcgtgcgac cgttgcgaag tcgtccccgc
     3241 ccacgatctg cgcacgcacg ccaatcatct tctgcttcgt cgcgtcgtcg tcgaggatct
     3301 cgttcgggcg cagcagaatg tggcgcgcgt gcagctggtc gaccatcgtg cgctcggcgc
     3361 cgcgcatctc gttgagcctc acgatctgga agctgccgct gctttgcagc ggctccgaga
     3421 actcgccggg ctgcatgcgg accacgacat cggcgaacag cgtaggaagc tgcgagccct
     3481 tgcgccaacc caggcttccg ccttcgagcg ccgtctgggc ctgcgagact tggatcgcca
     3541 actgcgcgaa ctcctcgcct gcgacgagcc gagcgtggat gtcctcgatc cgtcgccgcg
     3601 cggcctcgac atcggcttgc gtcgcgttcg cggggatcgc gatcaggata tgagagatgt
     3661 tgtagtcgaa ctcgttggtc gcgctcgcat ccgtatccgc gaggcactga tcgatctcgc
     3721 gcggtgtgat cgcgatacgc gcgatcac
//
LOCUS       DATCUD010000048         2024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71530, whole genome shotgun sequence.
ACCESSION   DATCUD010000048 DATCUD010000000
VERSION     DATCUD010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71530"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..588
                     /locus_tag="VIQ99_00680"
     CDS             43..588
                     /locus_tag="VIQ99_00680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEY9181679.1"
                     /translation="MQSALIFLFKTLADLYLLTFLLRLIMQWVRASYYNPLAQFVLKV
                     TSPLVVPARRVIPSVSGLDTATLVVLTALEILATFILVRLTGVSVPAPVLLLYSALRL
                     VALVVWFYTVALFIYVLLSWFGDRGMNPMAALLGQLVEPLLRPARRLLPPIGGLDLSP
                     LIVLLLLQAVRIALPLPLWLR"
     gene            663..1163
                     /locus_tag="VIQ99_00685"
     CDS             663..1163
                     /locus_tag="VIQ99_00685"
                     /inference="COORDINATES: protein motif:HMM:NF025822.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4426 domain-containing protein"
                     /protein_id="HEY9181680.1"
                     /translation="MVRRIRTLACLIVVAGLAACEPSTSVDITNTQEGVLPATESSKD
                     FGEYVLYFNALNTDQLSPEIAREYGIVRSKSRALLNVSIHRKQDGGPTQAITAAVSAS
                     AINLNGQLKTMTLREIREEAAIYYIGELAITDGEVLIYTIDATPTNDPSRGFTVRFKK
                     QFFVEE"
     gene            complement(1167..1622)
                     /locus_tag="VIQ99_00690"
     CDS             complement(1167..1622)
                     /locus_tag="VIQ99_00690"
                     /inference="COORDINATES: protein motif:HMM:NF016955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEY9181681.1"
                     /translation="MLTKLTAFFDRAFASDREDPAAREQALRVATALLLIEVARADYA
                     SDYAEDAAIRASLKQFFALDDTQATLLFEEARSAADQAVELQQFTRRLHEQLSNAEKL
                     RVVEMLWQVALADRRLDKHEDHLVRRIAELLYVAHSDLIRIRNRVRGAG"
     gene            complement(1627..>2024)
                     /locus_tag="VIQ99_00695"
     CDS             complement(1627..>2024)
                     /locus_tag="VIQ99_00695"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9181682.1"
                     /translation="IGEREDALAVVDWCRARWPERPLYLGGFSFGGALAIAIAARAAP
                     RGLVTVAPPVDRLPRDLNLPTCPWVLVHGDADEIVTPGPVLDWCATLAAPPKIVLLKG
                     VGHFFHGRLSDITQAVRDMFGPDFAARRR"
BASE COUNT          371 a          665 c          612 g          376 t
ORIGIN      
        1 acgtcgtggt atcttcggct ctctcgatgg acgaaagcac caatgcaaag cgcactgatc
       61 tttctcttca agacgctggc cgatctgtat ctgctcacgt tcctgctgcg cctgatcatg
      121 caatgggtac gcgcgagcta ctacaatccg ctcgcgcagt tcgtgctcaa ggtgacgagt
      181 ccgctggtcg tgccagcgcg ccgcgtgata ccgagcgtgt ccgggttgga cactgccaca
      241 ttggtcgtgt tgaccgcgct cgagattctc gcgacgttca tcttggtgcg ccttaccggc
      301 gtctccgtgc cggcacccgt gctgctgctt tactccgcac tgcggctcgt cgcattggtc
      361 gtgtggtttt acacggtcgc gctcttcatc tacgttctat tgagttggtt cggcgatcgc
      421 ggcatgaacc ctatggccgc gctgctcggt caactggtcg agccgctgct gcgcccggca
      481 cgccgtctgc tgccaccgat cggcggtctc gatctatcgc cgttgatcgt cctgttgctc
      541 ttgcaagccg tcaggattgc gttgccgctc ccactttggc ttcgctagac agtattcgtg
      601 cacccgcgta atgtcgggcg tgggcgcaga acgacaatat ggcgccaggc ttggagggga
      661 gcatggttag acgcattcgc acgctcgctt gcctcatcgt cgttgcaggg ctcgccgcct
      721 gcgagccgtc gacgagcgtc gacatcacga acacccaaga gggcgtgctg cccgcgaccg
      781 agagctcgaa ggacttcggc gagtacgtgc tctatttcaa cgccctgaac accgatcagc
      841 tctcacccga gatcgcccgc gaatacggaa tcgtgcgtag caagagccgg gcgttgctga
      901 atgtcagcat tcaccgcaag caggacggtg gccccacgca ggcgatcacc gccgccgtgt
      961 cggcctccgc gatcaacttg aacggccagc tgaagacgat gacgctgcgc gagatccgtg
     1021 aagaagcagc gatctactac atcggcgagc tcgcaatcac ggacggcgaa gtgttgatct
     1081 atacgatcga cgcaacgccc accaacgacc cgagtcgcgg cttcacggtg cggttcaaga
     1141 agcagttctt cgtcgaggaa tagggctcaa cccgcaccgc gtacgcggtt gcgtatccga
     1201 atcaggtcgg agtgtgccac gtagagcagc tccgcgattc gccgcacgag atgatcctcg
     1261 tgcttgtcga ggcgacggtc cgcgagtgcc acctgccata gcatctcgac cacgcgcagc
     1321 ttctcggcgt tcgacagctg ctcgtgtaaa cggcgtgtga actgctggag ctccacggcc
     1381 tgatcggccg cgctgcgcgc ctcctcgaac aacaaggtgg cctgcgtatc gtcgagcgcg
     1441 aaaaactgct tcagcgatgc gcgaatcgcc gcatcctccg cgtagtcgct ggcgtagtcc
     1501 gcgcgggcaa cctcgatcag cagcagggcc gtcgccacac gaagtgcctg ctcgcgtgcg
     1561 gccggatcct cgcggtcact cgcgaatgca cgatcgaaaa acgcagtcag cttggtcagc
     1621 acagcctcac cggcgcctcg ccgcaaaatc ggggccgaac atgtcgcgaa cggcctgcgt
     1681 gatatcggac aatcgcccgt ggaagaaatg cccgacgccc ttcaagagca cgatcttcgg
     1741 cggcgcggcc agagttgcgc accaatcgag cacgggcccc ggcgtcacga tttcatcggc
     1801 atcgccgtgc acgagcaccc acgggcacgt cggcagattc aggtctcgtg gcagccggtc
     1861 gaccggtggt gcgaccgtga cgagccctcg gggcgcggcg cgcgcagcga tcgcgatcgc
     1921 aagcgcccca ccgaaggaga acccaccgag atacaggggg cgctcaggcc aacgagcccg
     1981 acaccaatcg acgaccgcga gcgcatcctc acgctcgccg attc
//
LOCUS       DATCUD010000049         3663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7622, whole genome shotgun sequence.
ACCESSION   DATCUD010000049 DATCUD010000000
VERSION     DATCUD010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7622"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1487)
                     /locus_tag="VIQ99_00700"
     CDS             complement(<1..1487)
                     /locus_tag="VIQ99_00700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY9181683.1"
                     /translation="MAVLPPGVSADNFAAAIRELEAAVGKDWVMTSDEDLHPYRDHFS
                     YIKDQPNELVPSAAVGPDTTEQVQAIVRVANKYKLPLYAISTGKNFAYGGPSPNVRGS
                     VTVDLKRMNRILEVDDKRHFAVIEPGVSYNDLYRYIQERGLKVWIDTPDPGWGSLIGN
                     AMDHGIGYTMGFFRDHFGAHCGMEVVLPSGEVMRTGMGALPGSKSWHEYKHGFGPDPS
                     GLFGQGNFGIVTKMGFRLMPQPEHWRNGLVTVPKRADLVPLVDTVNYITDMGMAGEPW
                     YGSPLMALAGNREFLDAANRFDEAALDRLAAAANLHSWQVELQFYGSEKTTLAQWEYA
                     KELVARAIPGARLTDGESLPVPLTREQIEKTTGPYPTNMRRNVTQGVPGLGVWYMVGR
                     TEQSPNTWNETHIGLFSLVARTGEAVMQAQKDFAEITQKLGTPNLFPNALATPVNWYQ
                     FAFIMGNGFGMSMGENTPEGKKRATERLREVLKENAARGYGDYRGP"
     gene            1669..2841
                     /locus_tag="VIQ99_00705"
     CDS             1669..2841
                     /locus_tag="VIQ99_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008905406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9181684.1"
                     /translation="MSIGAAPSFDPADEAPLLDAIDRWIEREVRPIVREYDHADRYPA
                     HLVEQMKELGLFGATVSREHGGLGLPATTYAKLVMRIAAVWMSITGIFNSHLMLALLV
                     EKFGTPAQKRQWLPKLASGEIRGGLALTEPDAGTDLQGIRMTARRDGDGYVINGTKTW
                     ITNGIEGSCVGLLVKTDPNAEPRHKGMSLFIAPKAEGFTVGKKLDKLGYKSIDSAELV
                     FDDYRVPTDHLIGGVEGQGFYQVTGGLELGRINVAARGVGIAEGALELAGDYAQTRKT
                     FGRPICEHQAIQLKLGEMATRARAARLLTLDAAAAFDRGERCDLEAGMAKYFASEAAL
                     ENSIESMRIHGAYGYSKEYDIERLYRDAPLTVIGEGTNEIQRVIIAKQWLKRNPLA"
     gene            2838..>3663
                     /locus_tag="VIQ99_00710"
     CDS             2838..>3663
                     /locus_tag="VIQ99_00710"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009816163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9181685.1"
                     /translation="MRPLEGLRILSLEVWGAGPYGSQLLAAHGAEIIKIENPATGGDP
                     AREVGPHFLGNGDSQYFQAWNTSKRSVALDLKSTEGQLELAELVKTSAAVMNNLRGDQ
                     PAKLGLDYAALGKINPAIVCAHISAYGRDNERTAWPGYDFLMQAEAGLMSLTGEPDGP
                     PARFGPSIIDFMTGATAMVGLLSCLLNAQRTGRGCDVDVSLFDVALHQLNYSATWYLN
                     TGEAPTRLERSSHFSMAPVQTFPTADGWIFVMCMKDRFWRELLDALSRPDLGKDARF"
BASE COUNT          624 a         1183 c         1227 g          629 t
ORIGIN      
        1 ggcccgcgat agtcgccgta gccgcgagcg gcgttctcct tcagcacctc gcgtagccgc
       61 tcggtcgcgc gtttcttacc ttcgggcgtg ttctcgccca tgctcatgcc gaagccgttg
      121 cccatgatga acgcgaactg ataccagttc acgggcgtcg ccaacgcgtt cggaaacaga
      181 ttcggcgtgc cgagcttctg tgtgatctcc gcaaaatcct tctgtgcctg catgacggct
      241 tcgccggtgc gcgcaacgag cgagaacaac ccgatgtgcg tctcgttcca ggtgttcggg
      301 ctctgctcgg tgcggccgac catgtaccac acgccgagcc cgggcacgcc ctgcgtgacg
      361 ttgcggcgca tgttggtcgg gtacggcccc gtcgtcttct cgatctgctc gcgagtcagc
      421 ggcaccggca gcgattcgcc gtccgtcaag cgggcgcccg ggatcgctcg cgcgacgagc
      481 tccttcgcgt actcccactg cgcgagcgtc gtcttctcgg agccatagaa ctggagctcg
      541 acctgccacg aatgcagatt cgccgcggcc gcgaggcgat ccagggccgc ctcgtcgaat
      601 cgattcgcgg catcgaggaa ctcgcgattg ccggccagcg ccatcagcgg ggagccgtac
      661 cagggctcgc cggccattcc catgtccgtg atgtagttga ccgtatcgac gagcggaacc
      721 agatccgcgc gcttcggcac cgtgaccagg ccgttgcgcc agtgctcggg ctgcggcatg
      781 agcctgaagc ccatcttcgt gacgatgccg aagttgccct ggccgaacag gccggaaggg
      841 tcggggccga acccatgctt gtactcgtgc cagctcttcg agcccggcag cgcgcccatg
      901 ccggtccgca tgacctcgcc actcggcagc acgacctcca tgccgcagtg cgcgccgaag
      961 tgatcgcgaa agaaccccat cgtgtagccg atgccgtggt ccatcgcgtt gccgatcagg
     1021 ctgccccagc cgggatccgg cgtgtcgatc cagaccttga ggccgcgctc ttgaatgtag
     1081 cggtacagat cgttgtacga gactccgggc tcgatcacgg cgaagtgccg cttgtcgtcg
     1141 acctcgagga tccggttcat gcgcttcaag tcgaccgtga cgctgccgcg cacgttcggc
     1201 gaagggccgc cgtaggcgaa gttcttgccc gtggagatcg cgtacagcgg aagcttgtac
     1261 ttgttcgcga cgcggacgat cgcctgcacc tgctcggtcg tgtcggggcc gaccgccgcg
     1321 gacggcacga gctcgttcgg ttgatccttg atgtacgaga agtggtcccg ataaggatgc
     1381 aagtcctcgt cgctggtcat gacccagtct ttgccgacgg cggcctcgag ctcgcggatc
     1441 gcggcggcga aattgtcggc gctgacgccg ggtggtagca cggccatgat cattccctcc
     1501 gcgaatccgt ttcttgctgt cggaacgagt gtagatgata cgtgcgcgcg aacccacggt
     1561 tcagcttgtc acgcagcgga gcgcccctta gcctaggcga gaggcttgaa aaggagccgc
     1621 gcaggtgtcc ggacaattgg gcgtgcatcg gcacgcggga gagcggcgat gagcatcggc
     1681 gctgccccgt cgttcgatcc ggcggacgag gcgccactcc tggacgcgat cgatcgatgg
     1741 atcgagcgcg aggtgaggcc gatcgtgcgc gagtacgacc acgccgatcg ctatcccgct
     1801 cacctcgtcg agcagatgaa ggagctcggg ttgttcggtg ccaccgtgag ccgcgagcac
     1861 ggcgggctcg ggctgccggc gacgacatac gcgaagctcg tcatgcggat cgccgcggtg
     1921 tggatgtcga tcacgggtat cttcaactcg cacctgatgc tcgcgctctt ggtcgagaag
     1981 ttcggtacgc ccgcgcagaa gaggcaatgg ctgccgaagc tcgcgtccgg agagattcgc
     2041 ggcgggctcg cgttgacgga acccgatgcc ggcacggact tgcagggcat tcgcatgacg
     2101 gcgcgccgcg acggcgacgg gtacgtgatc aacggcacga agacctggat cacgaacggg
     2161 atcgagggct cgtgcgtcgg gttgctcgtg aagaccgatc cgaacgccga gccgcgtcac
     2221 aaaggcatga gcctgttcat cgcaccgaag gccgagggct tcaccgtcgg caagaagctc
     2281 gacaagctcg gctacaagtc gatcgactcg gccgagctcg tgttcgacga ctatcgcgtg
     2341 cccacggatc acctcatcgg tggcgtcgag ggccaggggt tctatcaggt caccgggggg
     2401 ctcgagctcg ggcgcatcaa cgtcgcggcg cgcggcgtcg gtattgccga gggagcgctg
     2461 gagctggccg gcgactatgc gcagacgcgc aagacgttcg gcaggccgat ctgcgagcac
     2521 caagcaattc aattgaagct cggcgagatg gcgacgcgcg cgcgtgcggc gcggctgctc
     2581 acgctcgacg cggccgccgc gttcgatcgc ggcgaacggt gcgatctcga ggccggcatg
     2641 gcgaagtatt tcgcgtccga ggctgcgctc gaaaacagca tcgagtcgat gcggatccac
     2701 ggcgcatacg gctactcgaa ggaatacgac atcgagcgtc tgtatcgcga cgcgccgctg
     2761 accgtgatcg gcgagggcac gaacgagatc cagcgcgtga tcatcgcgaa gcagtggctg
     2821 aagcggaatc cgctcgcatg aggccgctcg agggcctacg gatcttgagc ctcgaggtct
     2881 ggggcgcggg gccctacggc tcgcagctgc tcgcggcgca cggcgccgag atcatcaaga
     2941 tcgagaatcc cgcgaccgga ggcgatcctg cgcgtgaggt cggcccgcat ttcttgggca
     3001 acggcgacag ccagtatttc caggcgtgga acacgagcaa gcgcagcgtc gcgctggatc
     3061 tgaaatccac ggaagggcag ctcgagctcg cggagctcgt gaagacgtcg gcggccgtca
     3121 tgaacaacct gcgcggcgac cagcccgcaa agctcggcct cgactacgcc gcgctcggca
     3181 agatcaatcc cgcgatcgtc tgtgcgcaca tctcggccta cgggcgcgac aacgagcgca
     3241 cggcctggcc cggctacgac tttctgatgc aggccgaagc cgggctcatg agcctgaccg
     3301 gtgagcccga cgggccgccc gcgcgcttcg ggccctcgat catcgacttc atgaccggcg
     3361 cgaccgcgat ggtcgggttg ctgtcttgcc ttttaaacgc gcagcgcacc ggccgaggct
     3421 gcgacgtcga cgtctcgctg ttcgacgtcg cgctgcacca gctgaactac tcggccacct
     3481 ggtatctgaa caccggggag gcaccgacgc ggctcgagcg cagcagtcac ttctcgatgg
     3541 cgcccgtgca gacgttcccg accgccgacg gctggatctt cgtgatgtgc atgaaggacc
     3601 gcttctggcg cgagctgctc gacgcgctgt cgcgccctga tctgggaaag gacgcgcgct
     3661 tcg
//
LOCUS       DATCUD010000050         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85768, whole genome shotgun sequence.
ACCESSION   DATCUD010000050 DATCUD010000000
VERSION     DATCUD010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85768"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VIQ99_00715"
     CDS             complement(<1..615)
                     /locus_tag="VIQ99_00715"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9181686.1"
                     /translation="MPLEKHANTAVLFADISGSTKLYVDVGDERAREIVARTLGLWSA
                     LTVEGGGSVIQLRGDGMLSMFPTVDAALLTVVRMRDLPYQPPLSMHAGIHAGKVLQEA
                     EQLYGDVVNTAARMADIAKRFEIVLTAAAQQQLTDAARWRNLRLIRGVPVKGKSAPMD
                     VYLLADDRRGLTDYQPPLRKVAAGELSLRYAGRAFRIGAQGGACL"
     gene            703..>1781
                     /locus_tag="VIQ99_00720"
     CDS             703..>1781
                     /locus_tag="VIQ99_00720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HEY9181687.1"
                     /translation="MPARTIGPAALAAIVLACVACQPAGTTGEWRSYGSDLGATKYSS
                     LDQIDKTNVARLEIAWRRPALDAIVTTQSPQMRPGRNFRSTPLMVGGVLYAPNGAGFV
                     EAFDPATGETLWVEPPFEPGPNGYGGTATRGVGYWESGGDRRILTQHNEHLFALDAAT
                     GRPIPSFGDQGRVYLSAGMGGDIRYTWTGAPFVIGDVVVLGMSPLDEFANKEATRGDV
                     RAYDVRTGQLRWTFHVIPQAGEFGVETWENDSWQYTGHAPVWSLFSGDPKLGLVYMPI
                     TAPTNDMYGGHRLGDNLFTQSIVAVEAATGRRVWHFQTVRHDLWDYDPPAAPILVDIL
                     VDGRPIEAVVLLTKQAYAYVLDRRTG"
BASE COUNT          301 a          605 c          591 g          284 t
ORIGIN      
        1 caaacaagcg ccgccctgcg ccccgatccg gaacgcgcgc cccgcatagc gcaagctgag
       61 ctcgccggcc gcgaccttgc gcaagggcgg ctggtaatcg gtcagcccac gccggtcatc
      121 ggccagcaga tagacgtcca tcggcgcgct cttgcccttc acgggcacgc cgcggatcaa
      181 acgcaggttc ctccagcgcg cggcatccgt gagctgctgt tgcgccgccg cggtcaggac
      241 gatctcgaac cgtttcgcga tatcggccat gcgcgcagcc gtgttcacga cgtcgccata
      301 gagctgctcc gcctcttgga gcaccttccc cgcgtgaata ccggcatgca tcgacagagg
      361 cggttgatac ggcagatcgc gcatgcgcac gaccgtgagc agtgcggcat cgaccgtcgg
      421 gaacatcgag agcatgccgt cgccacgcag ctggatcacg ctgccgccgc cctcgacggt
      481 cagagccgac cacaaaccga gcgtgcgcgc gacgatttcg cgggcacgct cgtcgccgac
      541 gtcgacgtac agcttcgtgc tgccgctgat gtcggcgaac aagacggcgg tgttggcgtg
      601 cttctcgagc ggcacgggaa tcaataatgc ctcgaacgtt cggcggaaag gaatgatcgc
      661 ctatactcgg cggcgcggct acgacgcctg acagggggaa tcatgccggc gcgaacgatc
      721 ggtcccgcgg ccctcgccgc catcgtgctg gcgtgcgttg cctgtcaacc agccgggacc
      781 accggcgagt ggcgctcgta cggcagcgat ctcggcgcca cgaagtactc gtcgctggac
      841 cagatcgaca agaccaacgt tgcacgcctc gagatcgcct ggcgccgccc cgcgctcgac
      901 gcgatcgtca cgacgcagtc gccgcagatg cgccctggcc gcaactttcg cagcactcct
      961 ctcatggtcg gcggtgtgct gtacgcgccg aacggtgccg gcttcgtcga ggcgttcgat
     1021 cccgccaccg gcgagacgct gtgggtcgag ccgccgttcg agccgggccc gaacgggtac
     1081 ggcggcactg cgacacgcgg cgtcggctat tgggaaagcg gcggagaccg gcgcatcctg
     1141 acgcagcaca acgagcatct gttcgcactc gacgctgcca ccggccggcc gatcccaagc
     1201 ttcggggatc agggtcgcgt atacctctcg gccggcatgg gcggcgacat tcgctacacg
     1261 tggacgggcg cgccgttcgt gatcggcgac gtcgtcgtgc tcggtatgtc accgctcgac
     1321 gagttcgcga acaaggaagc cacgcgtggc gacgtgcgcg cctatgacgt gcgcacggga
     1381 cagctgcgct ggacgttcca tgtgattccg caggccggcg agttcggcgt cgagacgtgg
     1441 gaaaacgact cgtggcagta caccggccac gcgcccgtgt ggtcgttgtt cagcggcgat
     1501 ccgaagctcg ggctcgtgta catgccgatc acggcgccga cgaacgatat gtacggcggt
     1561 catcggctcg gcgacaacct gttcacgcag agcatcgtgg ctgtcgaggc cgcaacgggg
     1621 cggcgcgtgt ggcattttca aacggtccgt cacgatctct gggactacga tccgccggcc
     1681 gcgccgatac tcgtggacat cctggtcgac ggccggccga tcgaagccgt ggtgctgctc
     1741 acgaagcagg cctacgcgta cgtgctcgat cgccgcaccg g
//
LOCUS       DATCUD010000051         2984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99943, whole genome shotgun sequence.
ACCESSION   DATCUD010000051 DATCUD010000000
VERSION     DATCUD010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99943"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1737
                     /locus_tag="VIQ99_00725"
     CDS             <1..1737
                     /locus_tag="VIQ99_00725"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF007000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEY9181688.1"
                     /translation="ASGAEIPCFALTSPRVGSDATALVDTGVVCRGVQDGREIVGIRL
                     NWDKRYITLAPIATVVGLAFKLYDPDHLIGDVDDYGITAALVPTSLPGIEIGRRHLPV
                     GIPFQNGPTRGRDVFVPLDAIIGGTKMAGQGWRMLVQQLAVGRSIVLPSNALGAAQAA
                     VYASGAYAKLRRQFNLPIGKFHGVGEALARMAGAVYTMMAASRVTCTAITNGEKPAVP
                     SAILKYHNTELGRRVANDAMDVHGGKGIMLGPKNYLARGYESVPIAITVEGANILTRN
                     LIIFGQGAIRCHPFVRAEMEAARNPDRDAGLVEFDRLLFKHLGYALSNAARSLTMAVT
                     LARFTEVPAVGPPRRYYQHINRYSASFALITDAAMFTLGGELKRRELLSARLGDILSY
                     LYLASMVLKHYQDQGEPPEDLPLVEWSCRTLLYKTQEQFHGLLRNFPNRWVAALLRLC
                     IFPRGRTYSAPSDELGQRIVELIINPTSTRERLAAGAYTAVEPGNPLGLLQQAMLLAE
                     QVKPLERRVFDARRAGEIKADDIPGQIDEAEKKGILTAAEAEAVRAFDARVLDLTGVD
                     DFDPSELRRRGA"
     gene            1763..2857
                     /locus_tag="VIQ99_00730"
     CDS             1763..2857
                     /locus_tag="VIQ99_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181689.1"
                     /translation="MYARFTASALALGFVSTSFSSIALAQSDEIAAIPRVATTTTSRA
                     ASCNRACLEGWVDRYFAALIADNPSAVPLAPNVRFTENGQVLPVGEGLWKSMKSAGKY
                     RLPVTDADAGQIALITTVVEDHADPAQGTPALLALRLKVADGRITEIEQIVERNPQTA
                     QRVEAMGSPRAAFSTPIPAAKRMSRTELIATADKYFAGMQRNDGKGDYPFHPRCDRIE
                     NGGRSTNVPTPAGQTRPDPKTATGYSGQWSCLEQFQSGLLYFVSRIRDRRYVAVDQEN
                     GVVAAFAFFDHMAGSTRNFTRPDGRPHTAGPAQPWTWEILEFFKIEDGQLAEIEAFLT
                     RPPYGMLSGWSTWEDGMSDKIQDVTGYREP"
BASE COUNT          524 a          984 c          989 g          487 t
ORIGIN      
        1 gcgagcggcg ccgagattcc gtgcttcgcc ctcacctcgc cgcgcgtcgg ctcggacgcc
       61 accgcgctcg tcgatacggg cgtggtttgc cggggcgtcc aggacggacg cgagatcgtc
      121 ggcatccgcc tgaattggga caagcgctac atcacgctcg cgccgatcgc gaccgtggtc
      181 ggcctcgcgt tcaagctcta cgatcccgac catttgatcg gcgatgtaga cgactacggc
      241 atcacggccg ctctggttcc gacgagcttg cccggcatcg agatcggccg gcggcacttg
      301 cccgtaggca tcccgttcca gaacgggccg acccgcggcc gcgacgtgtt cgtgccgctc
      361 gacgcgatca tcggcggcac gaagatggcg ggccagggct ggcgcatgct cgtgcagcag
      421 ctggctgtcg gacgcagcat cgtgctgccg agcaacgcgc tcggcgcggc gcaagcggcg
      481 gtctacgcgt cgggcgccta cgccaagctg cgccggcagt tcaacctgcc gatcggcaag
      541 ttccacggcg tcggcgaggc gctcgcacgg atggccggcg ccgtttacac aatgatggcg
      601 gcatcgcgcg tcacgtgcac ggcgatcacg aacggcgaga agccggccgt gccgtctgcg
      661 atcttgaaat atcacaacac cgagctcggg cgccgagtcg cgaacgacgc gatggatgtt
      721 cacggcggca agggcatcat gctcggcccc aagaactacc tcgcgcgcgg ctacgagtcc
      781 gtgccgattg cgatcacggt cgagggcgcg aacattttga cacgcaacct gatcatcttc
      841 ggccaaggtg cgatccgctg ccatccgttc gtgcgcgccg agatggaggc cgcgcggaat
      901 cccgatcgcg atgcagggct cgtcgagttc gatcggctgc tgttcaagca tttgggctat
      961 gcgctgtcga acgcggcccg ctcgctgacc atggccgtca cgctcgcgcg cttcaccgaa
     1021 gttccggccg tcgggccgcc gcgccgctac taccagcaca tcaatcgcta cagcgcgtcg
     1081 ttcgcgctga tcacggacgc cgcgatgttc acgctcggcg gcgagctcaa gcggcgcgag
     1141 ctgctttcgg cgcggctcgg tgacattctg agctacctct atctcgcttc gatggtgttg
     1201 aagcactacc aggaccaagg cgagccgccc gaggatctgc cgctcgtcga atggtcgtgc
     1261 cgcacgctgc tctacaagac gcaagagcag tttcacggac tgctgcgaaa cttcccgaac
     1321 cgttgggtag cggctctgct gcggctctgc attttcccgc gcggccgcac gtattccgcg
     1381 ccgtccgacg agctcggcca gcggatcgtc gagctgatca tcaacccgac atcgacgcgc
     1441 gagcggctcg cggccggagc gtatacggcc gtggagcccg gcaatccgct cgggctactg
     1501 caacaagcca tgctcctcgc ggagcaggtc aagccgttgg aacggcgcgt gttcgacgcg
     1561 cgccgcgcag gcgagatcaa ggccgacgac attccgggac agatcgacga ggcggaaaag
     1621 aagggtattc tgacggctgc cgaggccgag gccgtgcgtg cgttcgacgc gcgagtcctc
     1681 gatctcacgg gcgtagacga tttcgatccg agcgagttgc gccgtcgcgg cgcctgaacg
     1741 aaaacaacga gggggagctc cgatgtacgc gagattcacg gcgagcgcgc tggcgctcgg
     1801 cttcgtgtcg acgtccttca gcagcatcgc gcttgcgcag agcgacgaga tcgcagcgat
     1861 tccccgcgtc gcgacgacga cgacttcgcg cgccgcgagc tgcaaccgcg cttgcctcga
     1921 aggctgggtc gatcggtatt tcgcggccct gatcgccgat aacccgagcg cagtgccact
     1981 cgcgccgaac gtgcggttca ccgagaacgg acaggtccta ccggtcggcg aagggctgtg
     2041 gaagagtatg aagtcggccg gcaagtaccg cctacccgtc acggatgcgg acgcgggcca
     2101 gatcgcgctg atcacgaccg tcgtcgagga tcatgccgat ccggcgcaag gcaccccggc
     2161 gctgttggcg ctgcgtctga aggtggccga cggccgcatc acggagatcg agcagatcgt
     2221 ggagcgcaat ccgcaaacgg cgcagcgcgt cgaagccatg ggttcgccgc gcgccgcatt
     2281 ctcgacgccg atcccggccg caaagcgcat gtcgcggaca gagctgatcg cgacggccga
     2341 caagtacttc gcgggaatgc agcgcaacga cggcaaaggc gactatccgt ttcatccgcg
     2401 ttgcgaccgc atcgagaatg gcggacgctc gacgaatgtg ccgacgccgg cgggccagac
     2461 gcgtccggat cctaagaccg cgaccggtta ctccggccag tggtcgtgcc tcgagcagtt
     2521 ccaatcgggg ctcctgtatt tcgtatcgcg gattcgcgac cgccgctacg ttgccgtcga
     2581 tcaggaaaac ggcgtcgtcg ccgccttcgc attcttcgat cacatggccg gcagcacgcg
     2641 caacttcacg cggcccgatg ggcgccccca cacggccggt cccgcgcagc cctggacgtg
     2701 ggagatactc gagttcttca agatcgagga cggccagctc gccgagatcg aggcgttcct
     2761 gacacgtccg ccgtacggca tgctatcggg ctggagcacg tgggaagacg gcatgtcgga
     2821 caagatccag gacgtgacgg gctatcgcga accctaggcg cggcgccggt cgcgggatct
     2881 gcggcgaaaa acccgtgcta gagtggtccg aaacgaacac ggggagcctg ccgatgagca
     2941 aaaccggtgt cttgatactg gcctgcgtga ttctcgcggc tttt
//
LOCUS       DATCUD010000052         6705 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7640, whole genome shotgun sequence.
ACCESSION   DATCUD010000052 DATCUD010000000
VERSION     DATCUD010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6705
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7640"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..740)
                     /locus_tag="VIQ99_00735"
     CDS             complement(<1..740)
                     /locus_tag="VIQ99_00735"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181690.1"
                     /translation="MSSEGFWSAKFAAARYVVAWLGYAWMRLVVLLPFRLQLAFGSAL
                     GRTLALVPSRRRIAARNIAVCLPELSAEAQADILERHFVSLGFSLMEMGMGWFGRPER
                     IRERVQIEGAEHLTGALERGRGVILFAAHFTTIEFFWPALRQLCPKLCGMYKWQRNPV
                     MNKMMTRGRGRCFDVMISKDNVREMMRCLRDNGVVWYAADQSYGGKSSVLLPFRLQLG
                     FGSALGRTLALVPSRRRIAARNIAVCLP"
     gene            875..1765
                     /gene="htpX"
                     /locus_tag="VIQ99_00740"
     CDS             875..1765
                     /gene="htpX"
                     /locus_tag="VIQ99_00740"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEY9181691.1"
                     /translation="MKRIALFLVTNLAVLAVIYIVLNVLGVERALTQGGTQLDLGALL
                     MFSAVVGFSGALVSLAISKWTAKMSTGAVVITTPRNATESWLLNTVYTQADRVGIRRP
                     EVAIYDSPDINAFATGPTRNNALVAVSTGLLAQLPQREVEAVLGHEVSHVANGDMVTL
                     TLIQGVLNTFVVFLSRIVGFVVDRVLLRNEGRSTGPGFFLASFVAQILLGILASMIVM
                     WFSRQREFRADTGGAALAGRDSMIRALETLRRAHEPPRLPESLHAFGIFGGGASGLRR
                     LLMSHPPLEERIAALRNAGR"
     gene            1844..2362
                     /locus_tag="VIQ99_00745"
     CDS             1844..2362
                     /locus_tag="VIQ99_00745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020505363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY9181692.1"
                     /translation="MIRFHAKLALVGLGLLISSAPVRSQQSVPVPDHADFVLVDKSDR
                     KLYLFKAGRVLREFDVSLGLVPNGPKQREGDFKTPEGRYVLDSRNVNSDYFLSIHVSY
                     PDESDRARAREQGVDPGNGIMIHGLPNELKRDLSSYLATDWTDGCIAVSNSDMVDIWL
                     MTRDPTPIEIRP"
     gene            2387..3745
                     /gene="ppnN"
                     /locus_tag="VIQ99_00750"
     CDS             2387..3745
                     /gene="ppnN"
                     /locus_tag="VIQ99_00750"
                     /EC_number="3.2.2.10"
                     /EC_number="3.2.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015724720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase PpnN"
                     /protein_id="HEY9181693.1"
                     /translation="MDALIAPEGSLEILSRLETSLLRDAGEGGLYGLWRQCSLAVLNS
                     GASDDDVRRILSRHESFRIAVVQYEGGIALELKNAPDIAFVGGSMIRGIKEHLFAVLR
                     DLLYAHDDVLSNPRFDLTSSAGITDAVFHILRNARVLRAHEEPRLVVCWGGHAIEREE
                     YDYTKVVGYALGLEGLDICTGCGAGAMKGPMKGATVGHAKQRIRTGRYLGLTEPTIIA
                     AESPNPIVNELVILPDMEKRLEAFVRMAHAIVVFPGGVGTAEEILYLLGLLLSPENED
                     ERLPLVFTGPASSKRYFDRLHAFIGATIGPIAQQRYRLILGDPAQVAAEVKRGLDRVR
                     ERRAAEDNAYFFNWSLDIGLELQQPFEATHESMRALELHRDQPAHRLAFQLRRAFSGV
                     VAGNVREAGIARVEKYGPFELRGDPQVIAALGQLLEDFVAERRMRLSEPSAYVPCYRI
                     VA"
     gene            3890..4129
                     /locus_tag="VIQ99_00755"
     CDS             3890..4129
                     /locus_tag="VIQ99_00755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181694.1"
                     /translation="MSEQKQHQFRPALFSKDGTNDDPSSSSGAEQHGWDAYRKWLSRV
                     STKPTGERAPLDHSIYSWRGYHNWADKIRQGWKDG"
     gene            complement(4126..4911)
                     /locus_tag="VIQ99_00760"
     CDS             complement(4126..4911)
                     /locus_tag="VIQ99_00760"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY9181695.1"
                     /translation="MQKIVVLNPKGGSGKTTIATNLAACYAATGQRPTLIDLDAQGSS
                     MRWLRKRPDDAAAIHGIAGFERSTTVTRSWQMRIPAESQTVIIDTPAAVEPHALPDLT
                     RGADAVLVPVMPSEIDIHATAKCIADLLLVAKIRRSEKRIAIIANRVRNNTRVSQSLQ
                     RFLVSLDIPLVATLRDTQNYVRSAEIGLGVYEMPRWQTQQDLTHWQLLLAWLTARRRE
                     ARNGVKTAKVVAIERPSGGPELTQVASTSGLASAAGRESLRPT"
     gene            5028..5204
                     /locus_tag="VIQ99_00765"
     CDS             5028..5204
                     /locus_tag="VIQ99_00765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181696.1"
                     /translation="MDAKDHGEQSSEQNGICRLEWIAWAIDAARRHKEEEQRDPPPRA
                     STHLTPLKSVAGRE"
     gene            5225..5491
                     /locus_tag="VIQ99_00770"
     CDS             5225..5491
                     /locus_tag="VIQ99_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181697.1"
                     /translation="MEVVLLWLDDLDDLVFSAALVFERLRGVLLKVGLAASYGIVGAE
                     LSIVTTHWAPTLAVVAAASVSAWLIGTTSHALYHRHNKASVTAA"
     gene            5555..>6705
                     /gene="htpG"
                     /locus_tag="VIQ99_00775"
     CDS             5555..>6705
                     /gene="htpG"
                     /locus_tag="VIQ99_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017939325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HEY9181698.1"
                     /translation="MDSSGPATFTFQAEVKQLLHLMVHSLYSDREIFLRELISNASDA
                     NDRLRFESLARPDLLGSDPELAIRVSVDAASRTLTVTDNGIGMSREEVIDNLGTIARS
                     GTGQFIARLTGDQRKDAQLIGQFGVGFYSAFIVADEVTVSTRRADADPSQGVSWGSDG
                     QGEYRVATIERPERGTAVQLKLKQDADEFLRPERLKALIRKYSDHIAFPVRFVDGGSD
                     EPVNRAKALWTRPRAEISDDEYVEFYKHIAHDTEAPLTFSHNRVEGKREYTSLLYVPS
                     AAPFDLWNRESPKGVKLYVQRVFITDQATQFLPLYLRFIRGIVDSSELTLNVSRELLQ
                     QDEAIGAMRSALTRRVLDMLERLADDPEKYQKFWNEFGLLMKEGLVEDFA"
BASE COUNT         1244 a         2100 c         2145 g         1216 t
ORIGIN      
        1 tcgggtaggc agacggcgat gttgcgcgcc gcgatccgcc ggcgtgaggg cacgagggcc
       61 agcgtgcggc ccaaggcgct tccgaagccc agctggagcc gaaacggcag cagcacgctg
      121 ctcttgccgc cgtagctttg gtcggcggcg taccagacca cgccgttgtc gcgcaagcag
      181 cgcatcatct cgcggacatt gtccttcgag atcatcacgt cgaagcagcg gccacggccg
      241 cgcgtcatca tcttgttcat cacggggttg cgctgccact tgtacatgcc gcacagcttg
      301 gggcagagct gccgcagcgc cggccaaaaa aactcgatcg tcgtgaagtg cgccgcgaac
      361 aggatgacgc cgcggcctct ctcgagcgcg cccgtcaggt gctccgctcc ctcgatctgc
      421 acacgctcgc ggattctctc gggacggccg aaccaaccca tgcccatctc catcagggag
      481 aatcccagcg acacgaaatg ccgctcgagg atgtcggcct gggcctcggc ggacagctcg
      541 ggtaggcaga cggcgatgtt gcgcgccgcg atccgccggc gtgagggcac gagggccagc
      601 gtgcggccca aggcgcttcc gaaggccagc tgaagccgaa acggcagcag cacgaccaac
      661 cgcatccaag cgtagccgag ccacgccacg acgtaacgag cggccgcgaa ctttgcgctc
      721 caaaaaccct ctgaggacat gtggccggga agcgtgctca ggtcatgcct ggcccggatt
      781 ttagcagtaa gcgcgagccc gtccggcttg aattctcgga cgggcgccgt catgttcgcc
      841 gtctgcacaa actcgagcgg agtgatcgaa gagaatgaag cgcatcgcgt tgtttcttgt
      901 caccaacctc gcggttctcg cagtgatcta catcgtgctg aacgtgctcg gtgtcgagcg
      961 cgcgctcacg caaggcggca cccagctcga tctgggggcg ctattgatgt tctccgcggt
     1021 ggtcggtttc tcgggtgcgc tcgtgtcgct cgcgatttcg aaatggacgg cgaagatgtc
     1081 gaccggagcg gtcgtgatca cgacgccgcg aaacgcgacc gagagctggc tgctgaacac
     1141 cgtatacacc caggcggata gagtcggcat tcggcgcccg gaggtagcga tctacgactc
     1201 gccggacatc aatgccttcg ccacaggtcc gactcgcaac aacgcgctcg tagccgtcag
     1261 caccgggctg ctcgcgcagc tgccgcagcg cgaggtagag gccgtgctcg ggcatgaggt
     1321 cagccacgtc gcaaacggcg acatggtgac gttgacgttg atccaaggtg tgctgaatac
     1381 gttcgtcgtg ttcctgtcgc ggatcgtcgg attcgtcgtc gatcgcgtct tgctccgcaa
     1441 cgagggtcgt tccacggggc ccgggttctt cctcgcctcc ttcgtggccc agattctgct
     1501 cggcatcctc gccagcatga tcgtgatgtg gttctcgcgg cagcgcgagt tccgcgcgga
     1561 cacgggcggt gcggctttgg ccggccgtga ctcgatgatt cgcgccttgg agacgttgcg
     1621 ccgcgcccac gagccgccgc gcctgccgga atcgctgcac gcattcggga tcttcggtgg
     1681 cggtgcgagc gggctccggc gcctcctgat gtcgcatcca cccctcgagg agcgcatcgc
     1741 cgccctgcgg aacgccggcc gctaggattc cgaccatgcc gtgatcgagg ccggacgcag
     1801 ttcgttgcaa ttttttccgc gcttgttcta gagtctcaag cgcatgatcc gattccacgc
     1861 gaagctcgcc ctcgtcggcc tggggctctt gatatcgagc gcaccggttc gaagccaaca
     1921 aagcgttccg gtgccggatc atgcggactt cgtcctcgtc gacaagtcgg atcgcaagct
     1981 ttacctgttc aaggctgggc gcgtgctgcg cgagttcgac gtttcgctgg gactcgttcc
     2041 gaatgggccg aagcagcgcg aaggcgattt caagacgccg gaaggtcgat acgtgctcga
     2101 ttcgcgcaac gtgaatagcg actacttcct ttcgatccac gtatcgtatc ccgatgagtc
     2161 ggaccgggcg cgcgcgagag agcagggcgt cgacccgggt aacggaatca tgattcacgg
     2221 gctgccgaac gagctcaagc gggacctgag cagctacctg gccacggatt ggaccgacgg
     2281 ctgcatcgcg gtcagcaact cggatatggt cgacatctgg ctcatgactc gcgacccgac
     2341 gccgatcgaa attcgcccct aacgctcacc aagaagacac tgcgcaatgg acgcgttgat
     2401 cgctcccgag ggcagtctcg agatactttc tcggctcgag acgagcttgc ttcgcgacgc
     2461 gggggagggc gggctctacg ggctctggcg gcagtgctcg ctcgcggtgc tgaactccgg
     2521 agcttcggat gacgacgtcc gcagaatatt gagccgtcac gagagcttcc ggatcgccgt
     2581 cgtgcaatac gaaggcggca tcgcgctaga gctcaagaac gcacccgaca tcgcattcgt
     2641 cgggggaagc atgattcgcg gcatcaagga acatctgttc gcggtgctgc gcgatctgct
     2701 ctatgcgcac gacgacgtat tgagcaatcc gcgcttcgat ctcacgagct ctgcgggaat
     2761 caccgacgcg gtatttcaca ttctgcgcaa cgcgagggtg ctgcgtgccc acgaggagcc
     2821 gcggctcgtc gtgtgctggg gtggccatgc tatcgagcgc gaggagtacg actacacgaa
     2881 agtcgtcggc tacgcgctgg ggctcgaagg cctcgacatc tgcaccggct gcggagccgg
     2941 ggcgatgaag ggccccatga agggggcgac cgtcggccac gccaagcagc ggatccgcac
     3001 ggggcgctac ctcgggctga ccgagcccac gatcatcgcg gcggagtcgc cgaatcccat
     3061 cgtcaacgag ctcgtgatcc tgccggatat ggagaagcgg ctcgaggcgt tcgtgcggat
     3121 ggcgcacgcc atcgtcgtct tcccgggcgg tgtcggaacc gccgaggaga tcctctactt
     3181 gctcggtctc ttgttgagcc ccgagaacga agacgaacgc ttgccgctgg ttttcaccgg
     3241 gcctgcgtcg agcaagagat acttcgaccg cctgcatgcg ttcatcggag ccacgatcgg
     3301 gccgatcgcg caacagcgct accgtttgat cctcggagac cctgcccaag tagcggccga
     3361 agtgaagcgc gggctcgatc gcgtgcgcga gcgacgggcc gccgaggaca atgcgtactt
     3421 cttcaattgg tcgctcgata ttggcctcga actccagcag ccgttcgagg cgacccacga
     3481 gtcgatgcgc gccctggagc ttcatcgaga tcaaccggcg caccgtctgg cgttccagct
     3541 gcgtcgtgcg ttctcgggtg tagtcgcggg caacgttcgt gaagcaggca tcgcgcgcgt
     3601 cgagaaatac ggcccgttcg agctgcgcgg cgatccgcaa gtcattgcgg cgctgggtca
     3661 gctgctcgag gacttcgtcg cggaacgccg catgcgtttg tcggagccga gcgcgtacgt
     3721 gccttgctac cgaatcgtcg cttgaccgag gtcacgccag acgcgtcatt atcgtcaaac
     3781 gagttgctgc actgcgtgcg acttcgtcgt tgctgtgaat tggttcctcg gctcgagcgc
     3841 gagcacggag tagccttcgc tcatctggga caaggattgt ctttagacca tgagcgagca
     3901 gaaacagcat cagttccgac cggcgctgtt ctcgaaagat ggcacaaacg acgatccatc
     3961 gtcgtcgtcg ggcgcagagc agcacggttg ggacgcgtat cgaaaatggc tatcgcgcgt
     4021 gagcaccaaa ccgaccggtg aacgcgcccc gctcgatcat tcgatctaca gctggcgcgg
     4081 ctaccacaac tgggccgaca agattcgcca gggctggaag gacggctaag tcggtcgtag
     4141 cgactcccgg ccggccgcgg aggccaagcc gctcgtcgag gcgacctgcg tcagctccgg
     4201 acccccgctc ggccgttcga tcgcaacgac tttcgccgtc ttgaccccgt ttcttgcctc
     4261 ccgccgtctg gcggtgagcc acgccagcaa tagctgccag tgcgtgagat cctgttgggt
     4321 ctgccaacgc ggcatctcat aaaccccgag cccaatctcc gcggagcgaa cgtagttttg
     4381 cgtgtcgcgc aaggtcgcga ccaaggggat gtcgaggctc acgagaaatc gttgcagcga
     4441 ctgcgatact cgtgtgttgt tgcggacgcg attcgcgatg atcgcgatgc gcttctcgga
     4501 ccgccgtatc ttggccacta gcaacagatc ggcgatgcat ttcgccgtcg catgaatgtc
     4561 gatctcggac ggcatcacgg gcacgagtac ggcatcggcg ccccgcgtga gatccggcag
     4621 ggcgtggggc tcgacggcgg ccggagtgtc gatgatgacg gtttggctct cggcaggtat
     4681 ccgcatctgc cagctgcgcg tgacggtcgt tgagcgctcg aagcccgcga tgccatggat
     4741 ggccgcagcg tcatcgggcc gtttgcgcaa ccaccgcatg ctcgaccctt gggcatcgag
     4801 atcgatcaat gtgggacgct gaccagtcgc ggcgtagcac gcagcgagat tggtcgcgat
     4861 cgtggttttt ccggaaccgc cctttgggtt aaggacgacg atcttctgca taggtgacga
     4921 caacttacaa taagtaaaaa actttgtcgc cccggcgaga taatcctcac agcccctgtc
     4981 ggcagcgagg tctatagttc aacggtcaag acgcgggtct taaagcaatg gacgcaaaag
     5041 atcacggcga acaatcatcc gagcaaaacg gaatctgcag gctggaatgg atcgcatggg
     5101 cgatcgatgc cgcccgccgc cacaaggaag aagagcagcg tgacccgccg ccgcgagcgt
     5161 cgacgcacct gaccccgctc aagagcgtag cggggcgcga ataacgagcc caaggcgaat
     5221 cgacatggaa gtcgtgctgc tctggctgga cgatctcgac gatctcgtgt tttcggccgc
     5281 gctcgtcttc gagcggctac gcggggtgct gctcaaggtc ggccttgcgg cgtcctacgg
     5341 catcgtgggc gccgagctgt cgatcgtgac gacgcactgg gcacccacgt tggcggtcgt
     5401 cgccgcagcg agcgtgagcg cctggttgat cggtacgacg tcgcacgccc tctaccaccg
     5461 ccacaacaag gcttccgtca cggccgcttg aaaaaacgtg ggctgcgcct aacctagcgc
     5521 cccatcgatt tcacgcggca agggttgggc gccgatggac agcagcgggc cggctacgtt
     5581 cacttttcag gcggaggtca aacagcttct gcacctcatg gtgcattcgc tgtatagcga
     5641 ccgcgaaatc ttcctccgcg agctgatctc gaacgcctcg gacgcgaacg accgcttgcg
     5701 attcgagagt ctcgctcggc ccgatctgct cggcagcgat ccggagctcg cgatacgcgt
     5761 gagcgtcgac gccgcatcgc gcacgttgac cgtcaccgac aacggaatcg gaatgagccg
     5821 cgaagaggtc atcgacaacc tcggcacgat cgcgcgctcg ggcaccgggc aattcatcgc
     5881 gcgcctgacc ggcgaccagc gcaaggatgc gcagctgatc ggccagttcg gcgtgggttt
     5941 ctactcggcg ttcatcgtgg cagacgaggt cacggtgtcg acgcggcgcg ccgacgccga
     6001 tccgagccaa ggcgtttctt ggggctcgga cgggcagggc gaataccgag tcgccacgat
     6061 cgagcgaccg gagcgcggta ccgccgtgca gctgaagctc aagcaagacg ccgacgagtt
     6121 ccttcgcccg gagcggctga aagcgctgat ccggaagtac tcggaccaca tcgcgttccc
     6181 cgtgcggttc gtcgacggcg gttccgatga gcccgtcaat cgtgcaaagg ccttgtggac
     6241 ccggccgcgg gcagaaatca gcgacgacga gtacgtggag ttctacaagc acatcgccca
     6301 cgacacggag gcgccgctga ccttcagtca caatcgcgtc gaaggaaaac gggagtacac
     6361 gagcctgttg tacgttccct ctgctgcgcc gttcgatttg tggaaccgcg aatcgccgaa
     6421 gggcgtgaag ctgtacgtcc aacgagtctt catcaccgac caggccacgc agttcctgcc
     6481 cctgtatctg cgcttcatcc gcggcatcgt cgactcgagc gagctcacgt tgaacgtttc
     6541 ccgcgagctt ctgcagcagg atgaagcgat cggagccatg cgcagcgcgc tcacgcgccg
     6601 cgtgctcgac atgctcgagc gtctcgccga cgaccccgag aaatatcaga aattctggaa
     6661 cgagttcggg ttgctgatga aagaagggct cgtggaggat ttcgc
//
LOCUS       DATCUD010000053         3030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_594, whole genome shotgun sequence.
ACCESSION   DATCUD010000053 DATCUD010000000
VERSION     DATCUD010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_594"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="VIQ99_00780"
     CDS             <1..281
                     /locus_tag="VIQ99_00780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181699.1"
                     /translation="FQHACALLADVDDRGPFRLVGLAVYDLERRATELQLSLVAEDSR
                     ARRLETALDQVAERFGRGAVMRATELTGDRGLGLAANLDFLDEEQGGG"
     gene            complement(278..2203)
                     /locus_tag="VIQ99_00785"
     CDS             complement(278..2203)
                     /locus_tag="VIQ99_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9181700.1"
                     /translation="MAPLIRFDNVSVAFGEQKILVGASFAIESHERVCLIGRNGAGKS
                     TTLKLITGAIEPDDGKVDRPSSLRLSLLDQKLAEESSLTVREFVMLGMAAQLERIARF
                     QALTAITDPDKATIQDLDQLHREIDAGGGFSMDVAVRTIVSELGLPADRRMSELSGGW
                     RRRVALAQALVSKPELLLLDEPTNHLDISTIVWLEDAVRRYPGAVLFVTHDRTFVERV
                     ATRIVDIDRGALRSWPGGYVDYLRQKAAAEEQEDRQNALFDKKLAEEETWVRQGVKAR
                     QTRNEGRVRALEELRDIRAQRIKRPRTARIALNESPELSGRKVIEARNVTHGYAGRKL
                     LDGFSLRIMRGDRIGIIGNNGVGKTTLLRILLGELVPDQGTVKLGTNLEVGYFDQLRR
                     ELDPSKTVAETIGEGRDYIVIQGHKKHVVAYLTDFLFSAKRALTPIAALSGGERNRVI
                     LAKLFTRAANLLVLDEPTNDLDVETLEALEQRLVEYDGTLIVVSHDRYFLDAVVTSTL
                     VFEDDGEIRRHAGGYSDWLERHRNLAVTDQPTAAKIVTPRDNRDKPPQRKLSYKLQRE
                     LDALPAQIAELESRVTELRTLVNDPALYQREGNEARDRLSELEDAERQLEAAFERWAE
                     LEQVALRIATSEASAEG"
     gene            2453..3007
                     /locus_tag="VIQ99_00790"
     CDS             2453..3007
                     /locus_tag="VIQ99_00790"
                     /inference="COORDINATES: protein motif:HMM:NF018693.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181701.1"
                     /translation="MVGFALALACIGSAATAQSNGSWDIVLNGRSHHIDAAYQWNEDN
                     WGLGVEREFASAGPWIKVALGNTFMDSMNNPSYMAGGGLKRRFRFRSDDFYVDLGGIA
                     FLMTRDNVNGDRPFPGLLPAATFGFKRVALNVTYLPESVVDSVTNSHRYDPSMKGVFF
                     LQLKLDAALFGPANSDRQWLAQGW"
BASE COUNT          516 a          917 c          971 g          626 t
ORIGIN      
        1 tgttccaaca cgcatgtgcg ttgttggccg atgtcgatga tcgcgggccg ttccggttgg
       61 tcgggctcgc ggtttacgat ctcgagcgac gcgccacaga gctgcagctc tccctggtcg
      121 cagaggactc gcgcgcgcgt cgcctggaga cggcgctcga tcaggtggcg gaacggttcg
      181 gtcgcggcgc ggtgatgcgg gcgacggagc tgaccggcga ccgggggctc gggctcgcgg
      241 cgaatctgga tttcctcgac gaagagcagg gcggcggcta gccctctgcc gaggcttccg
      301 atgtggctat tcggagcgcg acctgctcga gctccgccca acgctcgaaa gccgcctcca
      361 attgccgctc cgcgtcctcg agctcggaga ggcgatcccg cgcttcgttg ccttcacgtt
      421 ggtacaacgc ggggtcgttg acgagcgtgc gaagctcggt cacgcgcgat tcaagctcgg
      481 cgatctgagc cggcaatgcg tcgagctcgc gctgcagctt ataggacaat ttgcgttgtg
      541 gaggcttgtc gcgattgtcg cgtggcgtca cgattttggc cgccgtgggc tggtcggtga
      601 ccgcgaggtt gcgatggcgc tccaaccagt cgctgtagcc gcccgcgtgg cgccgaattt
      661 ctccatcgtc ttcgaacacg agcgtcgagg tgacgaccgc atccaggaaa taccggtcgt
      721 gactgaccac gatcaatgtc ccgtcgtact ccacgaggcg ttgctcgagt gcttccagtg
      781 tttccacgtc gagatcattg gtcggctcat cgagcaccaa taagttcgcg gcgcgcgtga
      841 acagtttcgc gagaatcacg cgattgcgct cgccgcccga caatgcggcg atcggtgtca
      901 gagcgcgctt ggcgctgaac agaaaatcgg tcagatacgc gacgacgtgt ttcttgtgac
      961 cttggatcac gatgtagtcg cggccctcgc cgatagtctc cgcgacggtc ttgctcggat
     1021 cgagctcgcg gcgcagttga tcgaagtagc cgacttcgag attcgtgccg agcttgaccg
     1081 tgccttggtc aggcacgagc tcgccgagta gaattcgcaa caacgtcgtt ttgccgacac
     1141 cgttgttgcc gatgatgccg atgcgatcgc cgcgcatgat ccgcaacgag aatccgtcga
     1201 gcagcttccg gccggcgtat ccatgcgtga cgttgcgagc ctcgatgacc ttgcggccgg
     1261 aaagctcggg gctttcgttt agcgcaatac gggcggtgcg cggccgcttg atccgctgcg
     1321 cgcggatgtc gcgtaactct tcgagtgcgc gtacgcggcc ctcgttgcgg gtctggcgag
     1381 ccttgacgcc ttgtcggacc caggtttctt cctcggcgag cttcttgtcg aacagcgcgt
     1441 tttgccgatc ctcttgctcc tcagcggcgg ctttctggcg caagtagtcg acgtaaccgc
     1501 ctggccaact gcgcagtgcg ccgcgatcga tgtcgacgat tcgtgtggcg acgcgttcga
     1561 cgaatgtgcg gtcgtgggtc acgaaaagca ccgcacccgg gtaacggcgg acggcgtcct
     1621 cgagccaaac gatcgtactg atgtcgagat gattcgtggg ctcgtcgagc agcagcagct
     1681 caggcttcga gaccaacgcc tgcgcgagcg cgacgcgccg ccgccaaccg ccggaaagct
     1741 cgctcatgcg ccgatcggcc ggtagcccga gctcgctcac gatcgtgcgg acggccacgt
     1801 ccatcgagaa cccgccgcct gcgtcgattt cccgatggag ctgatcgagg tcttggatgg
     1861 tcgctttgtc ggggtccgtg atcgcggtta gcgcctgaaa gcgagcgatg cgctcgagct
     1921 gtgccgccat gccgagcatc acgaactcgc ggaccgtgag actcgattcc tcggcgagct
     1981 tctgatcgag cagactgagc ctcaggctgc tggggcggtc gaccttgccg tcgtcgggct
     2041 cgattgcgcc cgtgatcagc ttcaacgtcg tcgatttgcc ggcgccgttt cgcccaatca
     2101 ggcagacgcg ctcgtgggat tcgatcgcga acgatgctcc gacgagaatc ttttgctcgc
     2161 cgaatgcgac ggagacgtta tcgaatcgaa tcagcggagc catgcgcgaa tcgcggcgga
     2221 cccaaaaagc ggagcgggta ctgtagcgac gagtcgcgaa gcgtcaacgg ctgctaggga
     2281 tagcggcccc gctgagccca gatcttgatt taaacataat atacattatg cgattctggt
     2341 cgggacagcg tcggtccggt ttacaggtct tctcaggatt cgcagctaac cgattgtttt
     2401 gattaaatgg cacgcgtctt gctgcttgct gcgcatgcag ccgaggacat ggatggtcgg
     2461 gttcgctttg gcgctggcct gcattggcag cgcggcaacc gcgcagtcga acggcagttg
     2521 ggacatcgtt ctgaacggtc gttcccatca catcgacgcg gcctaccaat ggaacgagga
     2581 caactgggga ctcggggtcg aacgcgagtt cgcttcggca ggcccctgga tcaaggtggc
     2641 gctcggcaac acgttcatgg acagcatgaa caacccttcg tacatggcag gcggcggcct
     2701 caagcggcgg tttcgcttcc gctcggatga tttttacgtc gatctcggcg gtatcgcgtt
     2761 cttgatgacc cgcgacaacg tgaacggcga tcggccattt ccggggctct tgccggccgc
     2821 gacattcggc ttcaagcgcg tggcgctcaa cgtcacgtac ttgccggaaa gcgtcgtcga
     2881 cagcgtcacc aattcgcacc gctacgaccc ctccatgaag ggtgtgttct tcctgcagct
     2941 caagctcgac gccgcgttat tcggtcccgc gaacagcgac cgtcagtggc ttgctcaggg
     3001 ttggtaaacc cctggtttca agccattttc
//
LOCUS       DATCUD010000054         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71598, whole genome shotgun sequence.
ACCESSION   DATCUD010000054 DATCUD010000000
VERSION     DATCUD010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71598"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..340)
                     /locus_tag="VIQ99_00795"
     CDS             complement(<1..340)
                     /locus_tag="VIQ99_00795"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9181702.1"
                     /translation="MLALIWGYNWVVMKVALQYIGPMDFAALRGVFGTVLLFGALWVV
                     GAPLRPRYIGKTICLGLFQTAGFVGLISWALDIGAAGKSAVLGYTMPFWVIVFGWPFL
                     PDRLRGWQWPA"
     gene            complement(464..856)
                     /locus_tag="VIQ99_00800"
     CDS             complement(464..856)
                     /locus_tag="VIQ99_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011378450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY9181703.1"
                     /translation="MTRKNFSSGSKWEPIVGYSRAVRVGPYVHVSGTTAGGPDGHIVG
                     IGDLAAQTRQCLHNIEAALEKAGAKLGDVVRTRMFVVNIGEWEKAGKAHGEFFGAIRP
                     TTTMVEVSKLIAPEMLIEIEADAYVGTD"
     gene            complement(873..1823)
                     /locus_tag="VIQ99_00805"
     CDS             complement(873..1823)
                     /locus_tag="VIQ99_00805"
                     /inference="COORDINATES: protein motif:HMM:NF017206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HEY9181704.1"
                     /translation="MRQLVVWLALLGACTCVSAQDRIIVSGASGQLGSLVIDELLARN
                     VAPENLILVSRTPNTDHLKAYAARGASVRFGDFNEPASLAAAYRGGTRMLLISINGGG
                     GDRPALHKVAIDAAVRAGVKQIAYTSYVNADQNQASTIAVDHRRTERILQDSGVAWTM
                     LRNQIYANGLVDQIAQIIRDGRYVTHTPDARVAYVTREDCAAAAAAVLATPGHENKAY
                     NITGPDAVGPRELVALAGEISGRSIELIVLTEAEYRRQLAANGTPEGAINGTISFAAE
                     LDSPYLREPSTAVADLTGRPATSVRTLLTQNRERLRAAAQ"
     gene            complement(1846..>2481)
                     /locus_tag="VIQ99_00810"
     CDS             complement(1846..>2481)
                     /locus_tag="VIQ99_00810"
                     /inference="COORDINATES: protein motif:HMM:TIGR00093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY9181705.1"
                     /translation="LGEQLQGRERVCFDGKPVRLTAAKLARPQQDFLAYYKPGATRGT
                     EEGAILKLPRPRHGRWIDVSPLDRNTSGLVVLTTDGELASRLMHPSAVVEREYAVRLL
                     GEVSPSQQEQLAEGITLDTGLAKIESIEVGKGSGSNAWYHVTLREARHRDLRPMLAAV
                     GLAVSRVIRVRYDTIVLGELFRGASRALTPAETKSLYKIADATPRRKAGAH"
BASE COUNT          424 a          848 c          767 g          442 t
ORIGIN      
        1 cggccggcca ctgccagccg cggagccgat cgggtaggaa cggccaaccg aacacgatga
       61 cccaaaacgg catcgtgtaa ccgagcaccg cactcttccc ggccgctccg atgtcgagcg
      121 cccacgagat cagtccaacg aacccggccg tttggaacag gccgaggcaa atcgtcttgc
      181 cgatgtagcg ggggcgcagc ggcgcgccga ccacccatag agcgccaaac aacagaacgg
      241 tgccgaagac gccgcgcagc gcggcgaaat ccatcggtcc gatgtactga agggccacct
      301 tcatcacgac ccagttgtac ccccagatca gggccagcaa accgagtgcg atcagggggc
      361 cggtgttcga agtgccagct gccgcgccag taccgggagc gttcatcgag gcctagggca
      421 cgacatcgcg ggcgacacag gttgctctca agggcgtgtt cgctcagtcg gtgccgacgt
      481 aggcatcggc ctcgatttcg atcagcatct caggagcgat gagcttcgac acctctacca
      541 tcgtggtcgt cgggcgaatg gcgccgaaga attccccgtg agctttgccg gctttctccc
      601 actcgccgat gttcacgacg aacatgcgcg tccgcacgac gtcgccgagc ttggcgcccg
      661 ctttctcgag cgcggcttcg atgttgtgca agcactggcg cgtctgcgcc gcgagatcgc
      721 cgattccgac gatatggccg tccggcccgc ccgccgtcgt tcccgagacg tgaacgtatg
      781 gaccgacgcg caccgcgcgc gagtacccga cgatcggttc ccacttcgag cccgacgaga
      841 aattcttgcg agtcatttgc ctggcttctc cgtcattgcg cggccgcgcg gagccgctcg
      901 cggttttggg tcagcagcgt gcgcacgctt gtcgccggac ggcccgtcaa atccgccact
      961 gccgtgctcg gctcgcgcag gtacggcgaa tcgagctccg cagcgaacga gatcgtgccg
     1021 ttgatggccc cctccggcgt tccattcgcc gcgagctggc gacgatactc ggcctcggtc
     1081 aagacgatga gctcgatcga cctaccgctg atctcgcccg cgagcgcgac gagctcccgc
     1141 ggtccgaccg catcggggcc cgtgatgttg tacgccttgt tctcgtgccc cggagtcgca
     1201 agaacggcag ctgccgccgc ggcgcaatcc tctcgcgtca cgtacgcgac gcgggcatcg
     1261 ggcgtgtgcg tgacgtagcg cccgtcgcga atgatttgtg cgatctggtc gacaagtccg
     1321 ttcgcgtaga tctgattccg aagcatcgtc caagcgacac cactatcctg caggattcgt
     1381 tccgtgcgac ggtgatcgac tgcaatcgtc gacgcctgat tctggtccgc attcacatag
     1441 gacgtgtacg caatctgctt cacgccagct cgcacggcgg catcgatcgc gaccttgtgc
     1501 agcgcgggcc ggtcgccgcc cccaccgttg atactgatca acagcatgcg tgtgcccccg
     1561 cggtaggcgg cagccagcga ggctggttcg ttgaagtcgc cgaagcgcac gctcgcgccc
     1621 cgcgcggcgt acgccttgag atgatccgta ttgggcgtcc ggctcacgag gattaagttc
     1681 tcaggtgcca cgttgcgggc caacagttcg tcgatcacta ggctgccgag ctggcccgat
     1741 gctccggaca cgatgatcct gtcttgtgcc gaaacgcacg tgcacgcgcc gagcaacgcg
     1801 agccatacaa ccaactgcct catccttgcc tctcgccttg aatcatcaat gagcgccggc
     1861 cttgcgacgc ggcgttgcgt ccgcgatctt atacaggctc ttggtttctg ccggcgtcag
     1921 cgcccggctc gcgccgcgga acagctcgcc gagcacgatc gtgtcgtaac gaacacggat
     1981 cacgcggctg accgcaaggc cgaccgcggc gagcatcggc cgcagatcgc gatgacgcgc
     2041 ctcgcgcagc gtcacgtgat accaagcgtt gctgccgctg cccttcccga cctcgatcga
     2101 ctcgattttg gcgaggcccg tgtcgagggt gatcccttcc gcaagttgct cctgctgcga
     2161 cggtgaaacc tcgccgagca gacgcaccgc atactcgcgc tcgaccaccg cgctgggatg
     2221 cattaggcgg ctcgcgagct cgccatccgt cgtgaggacg acgagccccg aggtattgcg
     2281 atcgagcggg ctcacgtcga tccaacggcc gtgacgcggg cgcggtagct tcagtatcgc
     2341 cccctcttcc gtcccgcgcg tggctcccgg tttgtagtat gcgaggaagt cctgttgcgg
     2401 acgcgcgagt ttcgccgcgg tcaagcgaac cggcttgccg tcgaagcaca cacgctcgcg
     2461 gccttgtagc tgctccccga g
//
LOCUS       DATCUD010000055         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92922, whole genome shotgun sequence.
ACCESSION   DATCUD010000055 DATCUD010000000
VERSION     DATCUD010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92922"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="VIQ99_00815"
     CDS             <1..222
                     /locus_tag="VIQ99_00815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181706.1"
                     /translation="PIYVWDWFTIPSPYGPSMELFSALHTVHIWGSRIIIIGTVLHLG
                     GVYKHAAFNQDGTFGKMLVAAREDRELNA"
     gene            complement(212..1279)
                     /gene="rsgA"
                     /locus_tag="VIQ99_00820"
     CDS             complement(212..1279)
                     /gene="rsgA"
                     /locus_tag="VIQ99_00820"
                     /inference="COORDINATES: protein motif:HMM:TIGR00157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEY9181707.1"
                     /translation="MTTLQSLGFDEFFAAQHEQRADRAWVPARVVAEGQSAFHLAGCR
                     APLGDLAGKLLGSLTKLERPVVGDWVEVVDGETRASIQRVLDRRTTLVRRAANTLAEP
                     QVVAVNVDVFFVVTAVNRDFNERRLERYVTAVWNSGAEPVIVLNKVDLETDLAPLLEA
                     IDRAAIGVPVVRASAASGEGLDELRAHIAPGKTVGFIGSSGVGKSSLTNRLLGRAVQA
                     VAGLRHDQRGRHTTTARQLIELPEGGVLIDTPGMRELGLLDDAGGVETSFADVAMFAE
                     RCRFRDCAHETEPGCGVLAAVQSGELPAERLASYRKLLAEIAAAERKRDPILAGRSKA
                     RWKAIHRALRERAKIDPKLKR"
     gene            1485..1561
                     /locus_tag="VIQ99_00825"
     tRNA            1485..1561
                     /locus_tag="VIQ99_00825"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1519..1521,aa:Pro,seq:cgg)
     gene            complement(1605..>1792)
                     /locus_tag="VIQ99_00830"
     CDS             complement(1605..>1792)
                     /locus_tag="VIQ99_00830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181708.1"
                     /translation="WPMAAMRAFMPDSQILFGTDYSPEPIESTVNELPGLSLPKEFEQ
                     MMLRGNAERLFPRFKVA"
BASE COUNT          294 a          610 c          575 g          313 t
ORIGIN      
        1 ccgatctacg tgtgggattg gttcacgatc ccgtcgccct acggtcccag catggagctg
       61 ttcagcgcct tgcacacggt ccacatctgg ggctcgcgca tcatcatcat cggcaccgtg
      121 ttgcatctcg gcggtgtgta caagcacgcc gcgttcaatc aggacggtac gttcggcaag
      181 atgctcgtcg ccgcgcgcga ggatcgcgag ctcaacgctt gagcttcgga tcgatcttgg
      241 cgcgctctct caaggcccga tggatcgctt tccagcgagc cttgctacgc cccgcgagga
      301 tcgggtcgcg cttgcgctcg gcggctgcga tctccgcgag caacttgcgg tagctcgcga
      361 ggcgctcggc cggcagctcg ccgctttgga ccgccgcgag cacgccgcac ccgggctcgg
      421 tttcatgggc gcagtcgcga aaccggcagc gctccgcgaa catcgcgaca tccgcgaagc
      481 tcgtttcgac gcctccggcg tcgtcgagca atccgagctc gcgcatcccc ggcgtgtcga
      541 tcaacacgcc gccttcgggc agctcgatga gttgccgtgc cgtcgtcgtg tgccggccgc
      601 gctggtcgtg gcgtaatccg gccacggctt gcaccgcgcg acccagcagg cgattcgtca
      661 acgaggactt ccctactccg gacgacccga tgaagccgac ggtcttgccg ggcgcgatat
      721 gggcgcgaag ctcatcgagc ccctctccgg aagccgcgct cgcacgcacg acgggcacgc
      781 cgatcgcggc ccggtcgatc gcttcgagca atggcgccag atcggtctcg agatccactt
      841 tgttcaacac gatcacgggc tcggcgccgc tgttccagac ggccgtcacg taccgctcga
      901 gccggcgttc gttgaaatcg cgattcacgg cggtcacgac gaagaacaca tcgacgttga
      961 cggcgacgac ctgcggctcg gcgagcgtgt tcgcggcgcg ccgtaccagc gtcgtgcggc
     1021 ggtcgaggac gcgttgaatc gacgcgcgtg tttcgccgtc gacgacctcc acccaatcac
     1081 cgaccacggg ccgctcgagc ttcgtcagag agccgagcag cttgcccgcg agatcgccga
     1141 gcggcgcgcg gcagcccgcg agatgaaacg cgctctgacc ttcggcgacg acgcgcgcgg
     1201 gaacccacgc gcgatccgca cgctgttcgt gctgcgcggc aaagaattcg tcgaaaccga
     1261 gtgactgaag cgtcgtcaaa gtgccgatga aacgcgtggc gtttgcgaga ttatgcgccc
     1321 gcgcggagca cgcgccatta cgtcacagat gtatacgccc gggcttgccc ttgccggggt
     1381 cggaagcgta taaaggcgcc ctcttttcgc gcgccggcgc ggcgagcggg cggcaccccg
     1441 aagccgccga tgctatgctt gtcgcgccgc ttctcgcacc gtgtcggggt gtagctcagc
     1501 ctggtagagc actgcgttcg ggacgcaggg gtcgtaggtt caaatcctgt caccccgacc
     1561 aactttgccc taagcgattc ccggctcgtt cgactcagcg tggcctacgc caccttgaag
     1621 cgcgggaaca agcgttccgc gttgccgcgc agcatcatct gctcgaactc tttgggcagc
     1681 gacaaacccg gcagctcgtt cacggtcgac tcgatcggct ccggcgagta gtcggtgccg
     1741 aacaagatct gagagtcggg catgaacgct cgcatcgcgg ccatgggcca gg
//
LOCUS       DATCUD010000056         2113 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_28982, whole genome shotgun sequence.
ACCESSION   DATCUD010000056 DATCUD010000000
VERSION     DATCUD010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2113
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28982"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..484)
                     /locus_tag="VIQ99_00835"
     CDS             complement(<1..484)
                     /locus_tag="VIQ99_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008168912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9181709.1"
                     /translation="MSRSSITEPRRQTPIYGDYEVVVVGGGPAGLAAALAAGRAGRST
                     ICIERYGFMGGAGTAAGLSTFCGLHAVVHGKHEQVVHGLADDILDRLGAMDGLNKPHL
                     TIQNQIMAQAYDISALKIAADDLMAAAKVHVLFHAFATGVAMADENRIEAVFVETKSG
                     R"
     gene            complement(505..1071)
                     /locus_tag="VIQ99_00840"
     CDS             complement(505..1071)
                     /locus_tag="VIQ99_00840"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY9181710.1"
                     /translation="MRSLHLAMAGVAACFVAELARAAEDGIYIGAGRGQVETDDTLGL
                     GEVYDDQDTVNKLILGWRPIDWFAVEASYFDLGAVTLSQSQPALAPYRLEQDGWNVFA
                     AFMLELGVFDLYAKGGIVKSSADLTQSVGAGQASSVDKDTDFGWGAGAQVRIRKVAAR
                     IEYEEFHISNGDRFDFPKMVSLGITWTF"
     gene            complement(1089..>2113)
                     /locus_tag="VIQ99_00845"
     CDS             complement(1089..>2113)
                     /locus_tag="VIQ99_00845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181711.1"
                     /translation="FILTDGDPQSDRSNTLAGADFRYRNSRLPGGRVLEGQTWYQETD
                     TEGVVGDNKAYGFGVSSPNNTGWRGGTEFRQIEQNFDPAVGFVNETGIRTLDFEIGYR
                     HRFVNRVLRSVLGGVEGSRVERLDTGLLDRQDFGLRLNIEGSSQERGFMMISTNEENI
                     PTDFTIYRPPNNVPGTPSYDPARDVVIPAGNYTWEQVFGGMRTGNQRKLSGFIGAGSG
                     EYYDGERTQLSGDIDWRPSEHLRLGLSYSANDVSLPDGDFVVRISSFRAQYAFSSRLS
                     WVNLIQYDNVSENLGFNSRLHWIPQAGREGFIVLNHGMSDIDQNDSFHSLNADVTVKF
                     SYTFRF"
BASE COUNT          363 a          676 c          669 g          405 t
ORIGIN      
        1 accggcccga tttcgtctcg acgaacacgg cttcgatccg gttttcgtcg gccattgcga
       61 cgccagtcgc gaacgcgtga aacagaacgt gcaccttcgc cgctgccatg aggtcgtcgg
      121 ctgcgatctt gagcgccgag atgtcgtagg cctgcgccat gatctggttc tggatcgtga
      181 gatgcggctt gttcaggcca tccatcgctc ccaaacgatc caggatgtcg tcggcgagcc
      241 cgtgcacgac ttgttcgtgc ttgccgtgca cgacggcgtg caagccgcag aacgtgctca
      301 aacccgcggc cgtgccggcg ccgcccatga agccgtagcg ctcgatgcag atcgtcgagc
      361 gccccgctcg ccccgccgcg agcgcggcgg cgaggccggc ggggccgccg ccgaccacga
      421 cgacttcgta gtcgccgtag atgggcgttt gccggcgcgg ttcggtgatc gaggagcgtg
      481 acatcgggcg ttatcgtagc cgagttagaa cgtccaagtg attccgagcg agaccatctt
      541 cgggaagtcg aagcggtcgc cgttgctgat gtggaattct tcgtattcga tccgcgccgc
      601 caccttacgg atccggacct gtgcgccggc gccccagccg aaatccgtgt ctttgtccac
      661 cgagctcgcc tgccctgcgc cgacgctctg cgtcaggtcg gcggacgatt tcacgatgcc
      721 ccccttcgca tacaaatcga agactccgag ctcgagcatg aaggcggcga agacgttcca
      781 gccgtcctgc tccagtcggt acggcgcgag cgcgggttgg ctctgcgaca aggtgaccgc
      841 gcccaagtcg aagtagctcg cctcgaccgc gaaccagtcg atcggccgcc agcccaagat
      901 cagcttgttg acggtgtctt gatcgtcgta aacctcgccg agcccgagtg tgtcgtcggt
      961 ttcgacttga ccgcgcccgg caccgatgta gatcccatcc tcggctgcgc gagcgagctc
     1021 cgcaacgaag cacgcagcaa cgccggccat cgcgagatgc agtgatcgca ttgggcggcc
     1081 tccttcgatt agaagcggaa cgtatagctg aactttacgg tgacgtcagc gttcaaggaa
     1141 tggaacgagt cgttctgatc gatgtcgctc atgccgtggt tcagcacgat gaagccctcg
     1201 cgcccggcct gcgggatcca gtgcaggcgg ctgttgaacc ctaagttctc cgaaacattg
     1261 tcgtattgga tcaggttgac ccacgacaag cgcgacgaga acgcgtattg cgcgcggaac
     1321 gacgagatcc gcacgacgaa gtcgccgtcg gggaggctca cgtcgttggc cgagtacgag
     1381 aggccgaggc gcagatgctc cgacgggcgc cagtcgatgt cgccgctcag ctgcgttcgt
     1441 tcgccgtcgt aatattcgcc gctgcccgcg ccgatgaatc ccgagagctt gcgttgattg
     1501 ccggtccgca tgccgccgaa cacttgttcc cacgtgtagt tgccggccgg gatcacgacg
     1561 tcgcgcgccg ggtcgtaaga cggtgtgccg ggcacgttgt tcggcggccg gtagatcgtg
     1621 aaatccgtcg ggatgttttc ctcgttcgtc gaaatcatca tgaagccgcg ttcctggctc
     1681 gagccctcga tgttgagtct caagccgaag tcctggcggt cgagcaatcc ggtatcgagc
     1741 cgctcgacgc gcgagccttc gacgccgccg agcaccgagc gcagcactct gttcacgaac
     1801 cggtggcgat agccgatctc gaaatccaac gtgcgaattc cggtctcgtt cacgaagccg
     1861 accgcgggat cgaagttctg ctcgatctgc cggaactccg tgccgccgcg ccagcccgtg
     1921 ttgttcggcg agctcacgcc gaaaccgtag gccttgttgt cgccgacgac gccttcggtg
     1981 tcggtttcct ggtaccacgt ttggccttcg agcaccctac cgcccggcag gcgcgagttg
     2041 cggtaacgaa agtcggcgcc cgcgagcgtg ttgctgcgat ccgactgcgg gtcgccgtcg
     2101 gtgaggatga aac
//
LOCUS       DATCUD010000057         2415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7673, whole genome shotgun sequence.
ACCESSION   DATCUD010000057 DATCUD010000000
VERSION     DATCUD010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7673"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..578)
                     /locus_tag="VIQ99_00850"
     CDS             complement(<1..578)
                     /locus_tag="VIQ99_00850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181712.1"
                     /translation="MSESTATIQSLRDRLTGLLADWGAELAVVLKELEDKRARLAELE
                     GRQDEVRALQQRIEGQNNLIEALRTDAEESQKLRAEVRSRDLELERVTSELESKKELV
                     RALRRDAEGGEKFKADSKQKERELDELKAKLKSADRQAAEAAEQLAALREAAAQTASE
                     ENSELEVLRSELEARKTMIKSLRADQERVTAL"
     gene            complement(801..1856)
                     /locus_tag="VIQ99_00855"
     CDS             complement(801..1856)
                     /locus_tag="VIQ99_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEY9181713.1"
                     /translation="MTSTPKPKIIHEGLRRNALGLTIRDYEGGMSTLCAGCGHDSITA
                     AIVQAFFELDIPPHGVAKMSGIGCSSKTPAYFLSASHGFNSVHGRMPSIATGASAANR
                     ELYLLGVSGDGDSLSIGLGQFMHALRRNLDMTYIIENNGVYGLTKGQFSASADVGSTA
                     KRGEVNKQPPIDPVQMALAVGGSFVARSFSGDKEQLVPLIKAGVSHRGFALIDVISPC
                     VTFNDHEDSTKSYAYTREFNHRAIHADFVPPATEIKAAYEEGEVMPVEMHDGSRVLLR
                     KVAKDYDPSSRGAAIEYIRARHRAGELVTGLLYIDESQPDLHEVNSTVATPLNRIPYE
                     DLCPGRDALIALQKRFR"
     gene            complement(1853..>2415)
                     /locus_tag="VIQ99_00860"
     CDS             complement(1853..>2415)
                     /locus_tag="VIQ99_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEY9181714.1"
                     /translation="KTFYRYLDVDGDGIPQRTLPGVHPRGAYFVRGSGHNERGAYTED
                     SAEYQQVVDRLTRKWATAASLVPEPAIRRTRKGASFGIVAVGSCDAAIHEALDKLARK
                     GVYADYCRVRAFPFGAKVRQFLEQHDHVFVVEQNRDAQLKTLLVAETEYPPARLESIL
                     NYGGLPMDCRCVMEALERRAAQGVAA"
BASE COUNT          371 a          819 c          781 g          444 t
ORIGIN      
        1 tgcaacgcgg tcacgcgctc ctggtccgca cgcagactct tgatcatcgt cttgcgcgcc
       61 tcgagctcgg aacgcaggac ctcgagctcg gaattctctt cactggccgt ctgagccgcg
      121 gcctcgcgca acgccgcgag ctgctcggcg gcctcggcgg cctgacggtc cgcgctcttg
      181 agctttgcct tcaactcgtc gagctcgcgt tctttctgct tgctgtcggc cttgaacttc
      241 tcgccgccct cggcgtcgcg acgcagcgcc cgcacgagct ccttcttgct ctcgagctcg
      301 gaggtcacgc gctcgagctc gagatcgcgg ctgcggacct cggcgcggag cttctgcgat
      361 tcctcggcgt cggtgcgcag cgcctcgatc agattgttct gcccctctat gcgctgctga
      421 agcgcacgga cttcgtcctg acggccctcg agctcggcga gccgcgcgcg cttgtcctcg
      481 agctccttca agacgactgc gagctcggcg ccccaatcgg caagcaagcc cgtcaggcga
      541 tcgcgcaagc tctggatcgt tgcagttgat tcgctcattt gcctaagcac cgcgtgggtt
      601 tgcgtcgctt aagctgccgg ttttaccgtc agattacggt gaatcacgtc acagcttcgc
      661 ggccccgcga agggctgcga cccgcgccaa tcctgggcag ccgggggttc gtggtaccca
      721 aaccctgacg gagcgctggt cgcggcgtcc ctggccgacc cctcacacgc cggccgccag
      781 gacggaacgc tggcacgcac tcagcggaag cgtttctgca gcgcgatcag cgcgtcgcgg
      841 ccggggcaga ggtcttcgta agggatgcgg ttgagaggag tggcgacggt gctgttgacc
      901 tcgtggaggt ccggctgcga ctcgtcgatg tagagcagcc ccgtcacgag ctcgcccgcg
      961 cgatgccgcg cccgaatgta ctcgatcgcc gcgccgcggc tgctcgggtc gtagtctttc
     1021 gcgaccttcc gcaacagcac gcggctgccg tcgtgcatct cgactggcat cacctcaccc
     1081 tcctcgtacg cggctttgat ctccgtggcc ggcggcacga agtcggcatg gatcgcgcgg
     1141 tgattgaact cgcgcgtgta tgcgtagctc ttcgtcgaat cctcgtgatc gttgaacgtc
     1201 acgcacggcg agatcacgtc gatcaacgcg aagccgcgat ggctcacgcc ggccttgatc
     1261 agcggcacga gctgctcctt gtcgccggag aagctgcgtg cgacgaacga gccgccgacc
     1321 gccaacgcca tttgcacggg gtcgatcggc ggttgcttgt tgacctcgcc gcgcttcgcg
     1381 gtcgacccga cgtccgcaga cgccgagaac tggcccttcg tgagcccgta cacgccgttg
     1441 ttctcgatga tgtaggtcat gtcgagattc cggcgtagcg catgcatgaa ctggccgagc
     1501 ccgatcgaca acgaatcgcc gtcgccggag acgccgagca gatacagctc gcggttcgcg
     1561 gccgaggcgc cggtcgcgat cgaaggcatg cggccatgca cggaattgaa gccgtgcgaa
     1621 gcggacagga agtacgccgg cgtcttcgac gagcatccga tgccgctcat cttcgcgacg
     1681 ccgtgcggcg ggatgtcgag ctcgaagaac gcctgaacga tggcagccgt gatcgaatca
     1741 tgaccgcagc cggcgcacag agtcgacatt ccgccctcgt agtcgcggat cgtgagcccg
     1801 agcgcgttgc gccggaggcc ctcgtggatg atcttcggct tcggcgtcga cgtcatgcgg
     1861 ccacgccctg cgcagctcgt cgctcgagcg cttccatgac acatcggcag tccatcggca
     1921 gaccgccgta attcaagatc gattcgagcc gcgcgggtgg atactcggtc tcggccacga
     1981 gcagcgtctt gagctgagcg tcgcggttct gctccacgac gaacacgtga tcgtgctgct
     2041 cgaggaactg cctgaccttg gcgccgaacg ggaacgcccg tacccggcaa tagtccgcgt
     2101 acacgccctt gcgcgcgagc ttgtcgagcg cttcgtggat cgcggcgtcg cagctaccaa
     2161 ccgccacgat accgaacgat gcgcctttgc gcgtgcggcg gatcgcgggc tccggcacga
     2221 gcgatgctgc cgtcgcccac ttccgcgtga gccgatccac gacctgctgg tactcggccg
     2281 aatcctcggt gtacgcgccg cgctcgttgt ggccggagcc gcgcacgaag tacgcgccgc
     2341 gcggatggac accgggcagc gtgcgctgcg ggatgccgtc gccgtcgacg tcgaggtagc
     2401 ggtagaacgt cttgg
//
LOCUS       DATCUD010000058         2350 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14821, whole genome shotgun sequence.
ACCESSION   DATCUD010000058 DATCUD010000000
VERSION     DATCUD010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2350)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2350)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2350
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14821"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..758
                     /locus_tag="VIQ99_00865"
     CDS             <1..758
                     /locus_tag="VIQ99_00865"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEY9181715.1"
                     /translation="VVGLGAIGVEVANAALKLGMNVLGYDPAITVQHAWALSSGVQKA
                     VNLDDLFARADAVTVHVPLNKSTDKLVNAARIESMRRGSVVLNFSRDAIVDAQAVAAG
                     LDSGKLRAYVTDFPTRELLDHGKVICLPHLGASTVEAEENCAVMVVDNVREFLENGNV
                     TRSVNFPETVLNRTRPHRIAIPHKNVPNMVAQILTALAAQNINIADMLNHSRDELSYT
                     LVDLDAAPNEATIARIRGIDGILSVRVLPIIDA"
     gene            776..1921
                     /gene="pheA"
                     /locus_tag="VIQ99_00870"
     CDS             776..1921
                     /gene="pheA"
                     /locus_tag="VIQ99_00870"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014160619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEY9181716.1"
                     /translation="MPKRTSKPRAKTQRKTAQAGSDDALAALRGKIDAVDGEIQKLIA
                     ERARYAKEIGVVKGITKTAEFYRPEREAQVLRRVVERNKGPLRDEEMVRLFRELMSAC
                     LAQEEPLKVAYLGPEGTFTQSAVLKHFGHSVHALSVPTVDEVFHEVESGAADFGVAPI
                     ENSSEGTVNIHTLDMFLTSPLKICGEIELRIHQHLMGRMDGLKDIKRVCSHPQSLAQC
                     RGWLAQNLPDVEKVPVASNAEGARRARDEDGTAALAGEAAAKVYGLRILFNTVEDRDD
                     NTTRFVVIGRKLFPPSGNDKTTVLVSARESEGPGVLLHLLAPLSEHGVNMTRIESRPS
                     RKRKWDYVFFLDLDGHAEDPKVRKALDKMKTKASLLKVLGAFPKAIL"
     gene            1932..>2350
                     /locus_tag="VIQ99_00875"
     CDS             1932..>2350
                     /locus_tag="VIQ99_00875"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932236.1"
                     /note="catalyzes the formation of
                     5-O-(1-carboxyvinyl)-3-phosphoshikimate from
                     phosphoenolpyruvate and 3-phosphoshikimate in tryptophan
                     biosynthesis; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEY9181717.1"
                     /translation="MPHHPNRFLAEPTRRVGGQITVPGDKSISHRALMLGSIAEGRTV
                     VHGFLASEDCLATEAALAAMGVDIERTAIGTVRIDGVGMQGLRAPTRTLDLGNSGTAI
                     RLLMGLLAGQPFDCELTGDASLRQRPMERVAAPLRTMG"
BASE COUNT          449 a          737 c          765 g          399 t
ORIGIN      
        1 gtgtcgtcgg tttgggagcg atcggcgtcg aggtggccaa cgcggccctg aagctcggca
       61 tgaacgtgct ggggtacgac ccggcgatca ccgtgcagca tgcatgggcg ctctcgtcgg
      121 gcgtccagaa ggcagtgaac ctcgacgatc tgttcgcgcg cgccgacgcg gtcacggtgc
      181 acgtgcctct gaacaagagc acggacaagc tcgtgaatgc ggcgcggatc gaatcgatgc
      241 gccgaggttc cgtcgtcctg aacttctctc gcgatgcgat cgtcgacgcg caggccgtcg
      301 ccgcagggct ggattccggg aaactgcgcg cctacgtcac ggattttccg actcgcgagc
      361 tgctggacca tggcaaggtg atttgtttgc cgcacctcgg cgcttcgacc gtcgaagccg
      421 aggagaactg cgcggtcatg gtcgtcgaca acgtgcgtga gttcctagag aacggcaacg
      481 tcacacgctc cgtgaacttt cccgagaccg tgctgaaccg cacgcgcccg catcgcatcg
      541 ccattccgca caagaatgtg ccgaacatgg tggcgcagat tctgaccgcg ctcgcggcac
      601 agaacatcaa catcgccgac atgctgaacc attcgcgcga cgagctttcg tacacgctcg
      661 tggacctcga cgcggcaccg aacgaggcga cgatcgcgcg aatccgcggc atcgacggta
      721 tcttgtctgt acgcgtcctg ccgatcatcg acgcttgagc gtaccgggag cggccatgcc
      781 gaaacgcacc tccaagccca gggcgaaaac gcaacgtaag actgcccaag ctggaagcga
      841 cgacgcgttg gccgcgttgc gagggaagat cgacgcggtc gatggcgaga tccaaaagct
      901 gatcgccgag cgtgccagat acgctaagga gatcggtgtc gtgaagggca tcacgaagac
      961 tgccgagttc taccgccccg agcgcgaagc gcaggtgcta cgccgcgtcg tcgagcgcaa
     1021 caaagggccg ctgcgcgacg aagagatggt ccggctgttt cgcgagctga tgtcggcgtg
     1081 cctcgctcaa gaggagccgc tcaaggtcgc ctatctcgga cccgaaggga cctttacgca
     1141 gtccgcggtc ttgaagcact tcgggcattc cgtgcacgcc ttgtcggtgc ccacggtcga
     1201 cgaggttttt cacgaggtcg agagtggcgc cgcagacttc ggcgtcgcac cgatcgaaaa
     1261 ctcgagcgaa ggcacggtga acattcatac gctcgacatg ttcctgacct cgccgctgaa
     1321 gatctgcggc gagatcgagc tgcgcatcca tcagcacctg atgggacgca tggacggcct
     1381 caaagacatc aagcgcgtgt gctctcatcc acaatcgctg gctcagtgtc gcggctggct
     1441 cgcgcagaat ttgccggacg tggagaaggt ccctgttgcg agcaacgcgg aaggcgcgcg
     1501 gcgtgcccgg gacgaagacg ggaccgccgc cctcgccggt gaagccgctg ccaaggtgta
     1561 tgggctgcgt atcctcttca acaccgtcga ggatcgcgac gacaacacga cccgcttcgt
     1621 cgtgatcggt cggaagctgt ttccgccgag cggcaacgac aagacgacgg tgctcgtgtc
     1681 ggctcgcgag tccgagggcc ccggcgtgct tctgcatctg ctcgcgccgc tgtcggagca
     1741 tggcgtgaac atgacgagaa tcgagtcccg gccttcacgg aagcggaaat gggactatgt
     1801 gttcttcttg gatctcgacg gccacgccga ggatccgaag gtccgcaagg ccctcgacaa
     1861 gatgaagacg aaggcgtcgc tgctgaaggt gctcggcgca ttcccgaagg cgattctcta
     1921 gctcgcgact cgtgccgcat catcccaatc gctttcttgc ggagcccacg cggcgcgtcg
     1981 gcgggcagat aacggtaccc ggcgacaagt cgatctcgca ccgcgccttg atgctcggct
     2041 cgatcgccga ggggagaacc gtcgtgcacg gcttcctcgc gagcgaggac tgcctcgcca
     2101 cggaagcggc gctcgcagcc atgggcgtcg acatcgagcg cacggcgatc gggacagtcc
     2161 gaatcgatgg cgtcggcatg caaggccttc gagcgccgac ccggacgctc gacctcggca
     2221 attccgggac agcgattcga ttgctgatgg ggcttctcgc ggggcagccc ttcgattgcg
     2281 agctcaccgg cgacgcatcg ctcagacagc gcccgatgga gcgagtcgca gcaccgctgc
     2341 gtacgatggg
//
LOCUS       DATCUD010000059         1823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43171, whole genome shotgun sequence.
ACCESSION   DATCUD010000059 DATCUD010000000
VERSION     DATCUD010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43171"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VIQ99_00880"
     CDS             <1..309
                     /locus_tag="VIQ99_00880"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9181718.1"
                     /translation="AIEGRERLAEISGGGSRGCKNVPWIEQGVRHIYTNHVITPTAEG
                     ATGVVDMLMIGLGGDPNKIEYDGHYVDTYVRTPQGWRFKQRVHHALLREGQRVTPAAE
                     "
     gene            complement(319..1407)
                     /locus_tag="VIQ99_00885"
     CDS             complement(319..1407)
                     /locus_tag="VIQ99_00885"
                     /inference="COORDINATES: protein motif:HMM:NF028266.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative porin"
                     /protein_id="HEY9181719.1"
                     /translation="MATTLRAAPAVVLSALAFSATAEDFSWQVSGGYGATELAPYADT
                     ERTVLDATYYFDPVDDSRGPYALAPFLNRSSRVTAGVVREKTTLTTLVATIGSPPPGT
                     PTAIDVTEDSTGYVFGGRYVWPRSGWYVGASYRNEEMDHEPSSSSLLQDTTTDGYQLF
                     GGRYLGESTTVDLGAGTTEQTTELVITCITSLCLSGRTATHVDTEDWSIGTTHVRRGP
                     RLSYAITGRFSRADVTPSIDELVLAPPVGTFPLRPTTPMTIAGGVSVAAFTPIAAPFS
                     GPSPVEDERDVLSLGGELFPTDRLGVRIGFARAEGDYIEDDTLDLGATWFFKPGIAIE
                     LVVARTETEIGALERDIDRAEVRFLGRL"
     gene            1605..>1823
                     /locus_tag="VIQ99_00890"
     CDS             1605..>1823
                     /locus_tag="VIQ99_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181720.1"
                     /translation="MLRGRWAILVPMSLLGLALAIPSPAAAQTDVVTLHNGDRLTGEI
                     KSLDRGILFFDPPYSDTIQITWEHVATLV"
BASE COUNT          318 a          577 c          619 g          309 t
ORIGIN      
        1 gcgattgagg ggcgagagcg gctcgccgag atctcgggcg gcggctcacg cgggtgcaag
       61 aacgtgccgt ggatcgagca gggagtccgg cacatctata cgaatcacgt gatcacgccg
      121 accgcggaag gcgccaccgg cgtcgtcgac atgctcatga tcggtctcgg cggagatccg
      181 aacaagatcg agtacgacgg tcactacgtg gacacgtacg tgcgcacgcc gcagggttgg
      241 cgcttcaagc agcgcgtgca tcacgcgctg cttcgcgaag ggcagcgcgt cacgccggcg
      301 gcggaataga gcacaacctc agagtctgcc gaggaatcgg acctcggctc tgtcgatgtc
      361 gcgctcgagc gcgccgatct cggtttcggt gcgcgcgacc acgagctcga tcgctattcc
      421 cggcttgaag aaccacgtgg ccccgagatc gagcgtgtcg tcctcgatgt aatcgccttc
      481 tgcgcgggcg aagccgattc ggacgccgag ccgatccgtc gggaacagct cgccgccgag
      541 cgaaaggacg tcgcgctcgt cctcgacggg ggaaggcccg gaaaacgggg cggcgatcgg
      601 cgtgaatgcc gccacactga ctccgccggc gatcgtcatc ggtgtcgtcg gccggagtgg
      661 gaaagtgccg acgggcggcg cgagcaccag ctcgtcgatg ctcggcgtta cgtcggcgcg
      721 cgagaagcgg cccgtgatcg cgtagctgag ccgaggaccg cgccgaacat gtgtcgtacc
      781 gatgctccag tcctcggtgt cgacgtgcgt cgccgtgcgg ccggacaaac acagggaggt
      841 gatacaggtg atgaccagct ccgtggtctg ctcggtcgtg cccgcgccga gatccaccgt
      901 ggtcgactcg ccgagatagc gaccgccgaa cagctgatac ccatcggtcg tcgtgtcctg
      961 gagcaacgac gacgagctcg gctcgtgatc catttcctcg tttcggtagc tggccccgac
     1021 gtaccagccg gatctcggcc aaacgtagcg gcctccgaac acatagccgg tcgagtcctc
     1081 ggtcacgtcg atcgcggtcg gcgtgcccgg tgggggcgaa ccgatcgtgg ctaccagcgt
     1141 cgtgagcgtg gtcttctcgc gcacgacgcc ggccgtcacg cggctgctgc ggttcaagaa
     1201 cggtgcgagc gcgtacggac cgcgcgagtc atcgacgggg tcgaagtaat acgtggcatc
     1261 gagcacggtt ctttcagtgt ccgcataagg agcgagctcg gttgcgccgt agccgcccga
     1321 gacctgccac gagaagtcct cggccgtcgc gctgaaagcc agtgccgaca acacgaccgc
     1381 gggggcggcg cggagcgtgg tggccattgg ggatttctga tgcatcgcga atctcggcaa
     1441 agggtgccgt cgtttttctc cgcgtgcgcc cgttgagcgc gcgcgaattg tcgccgatca
     1501 tgctgcctgg ccatgcgcgg atgcaacaac gcccgcgctc gtgacacaac aagggtggcg
     1561 tgcagatgct gacgcgatcg atccgacccg gcttagggtc tcaagtgctt cgaggacgct
     1621 gggcgatctt ggtgccgatg tcgttgctgg ggctcgctct cgccatcccg agcccggccg
     1681 ccgcccagac ggatgtcgtg acgctccaca acggcgatcg cctgaccggc gaaatcaagt
     1741 cgctcgatcg cggaattttg tttttcgacc ctccatacag cgacaccatc caaatcacgt
     1801 gggagcacgt cgcgacgttg gtc
//
LOCUS       DATCUD010000060         1593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50325, whole genome shotgun sequence.
ACCESSION   DATCUD010000060 DATCUD010000000
VERSION     DATCUD010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50325"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="VIQ99_00895"
     CDS             <1..847
                     /locus_tag="VIQ99_00895"
                     /inference="COORDINATES: protein motif:HMM:NF014881.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HEY9181721.1"
                     /translation="LKLGRPPALAIVLVGDDPASEVYVRNKLKTAEDAGMGVQFERLP
                     SSSSLTAVLGVVERFNKDPKIDGILVQSPLPKALGADAEQRVFDTIDPSKDVDGFNPI
                     SAGRVQQNREGFAPCTPAGVIELLVRAKIPIEGQHAVVIGRSDIVGKPMAALLLHKNA
                     TVTICHSRTRDLPAMARTADILVAAIGRPAFVTKDFVKPGAVVIDVGINSVTNADEAK
                     RIFAAYPERLEVFKKRGSVLVGDVHPEVAATAGALTPVPGGVGPLTIAMLMANTVKAA
                     ELRAR"
     gene            884..1459
                     /locus_tag="VIQ99_00900"
     CDS             884..1459
                     /locus_tag="VIQ99_00900"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019938410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9181722.1"
                     /translation="MRVASLLLCLALVPPLGAAQETSAVAVHPRVRVVTTAGSFVIEL
                     DQNRAPKTVEAFLKYAKAGFYSGTIFHRVVAGFIAQAGGYDKDLQPKPVTENIVNESG
                     NGLSNLRGTVALARTTEPHSATSQFYVNLADNIDLNPRPTRWGYAVFGRVTEGMEVVD
                     DIGHRPTAGGGPFDRNVPVEPVVIERIELLE"
BASE COUNT          278 a          538 c          524 g          253 t
ORIGIN      
        1 cttgaagctc ggtcgccccc cggcgctcgc gatcgtgctc gtcggcgacg atccggcgtc
       61 ggaggtctac gtgcgcaaca agctcaagac ggccgaggac gccgggatgg gcgtgcagtt
      121 cgagcgcctg ccgagctcgt catcgctcac cgccgtgctc ggcgtcgtcg agcgcttcaa
      181 caaagacccg aaaatcgacg gcatcctcgt ccaatcgccg ctgccgaaag cgctcggtgc
      241 ggacgccgag cagcgcgtgt tcgacacgat cgaccccagc aaggacgtcg acggcttcaa
      301 cccgatctcg gcgggccgtg tgcaacagaa ccgcgaggga ttcgcgccgt gcacgccggc
      361 cggcgtgatc gagctgctcg tgcgcgcgaa gatcccgatc gaaggccagc atgcggtcgt
      421 gatcgggcgt tccgacatcg tcggcaagcc gatggccgcg ttgttgctgc acaagaacgc
      481 gaccgtgacg atctgtcact cgcgcacgcg cgacctgccg gccatggcgc gcacggccga
      541 catcctcgtc gccgcgatcg gccgccccgc gttcgtcacg aaggacttcg tgaaaccggg
      601 cgccgtcgtg atcgacgtcg gcatcaactc cgtgaccaac gccgacgaag ccaagcgcat
      661 cttcgccgct tacccggagc gtctcgaggt gttcaagaag cgcggctccg tgctcgtcgg
      721 cgacgtgcac cccgaggtcg cggccaccgc cggggcactg acgccggtgc cgggcggcgt
      781 cgggccgttg acgatcgcga tgctgatggc caacacggtc aaggcagccg agctgcgcgc
      841 gcgctagaat cggctcgaag cgcggactca cgaggggacc ctgatgcgcg ttgccagctt
      901 gttgctctgc ctggccttgg tgccgccgct cggagcggcg caggaaacct cggcggtcgc
      961 ggtgcacccg cgggtccgcg tggtcacgac cgcgggaagc ttcgtgatcg agctcgacca
     1021 gaaccgcgcg ccgaagaccg tcgaagcgtt cctgaagtac gcgaaggccg gtttttattc
     1081 cggcacgata tttcaccgcg tcgtggccgg cttcatcgcg caagccggcg gctatgacaa
     1141 agacctccag ccgaaacccg ttacggagaa catcgtcaac gagtccggca acggcttgag
     1201 caacctgcgc ggcacggtgg cgctcgcgcg cacgaccgag ccgcactccg cgacgagtca
     1261 gttctacgtg aacttggccg acaacatcga cttgaaccca cgacccaccc gttggggata
     1321 cgcggtgttc ggccgagtca cggaaggaat ggaggtcgtc gacgacatcg gtcaccgacc
     1381 gacggccggt ggtggcccgt tcgaccgtaa cgttcccgtc gagcccgtcg tcatcgagcg
     1441 catcgagctg ctcgagtagc gctcgatgag cgcgttgttc atctccgacc tgcatctcca
     1501 tgcgggcgac gcggaggcga ttcgccgatt catcgagctc accgacggcg aagcgcggaa
     1561 gtgccgcgaa gtctacatat tgggcgacct gtt
//
LOCUS       DATCUD010000061         2389 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71639, whole genome shotgun sequence.
ACCESSION   DATCUD010000061 DATCUD010000000
VERSION     DATCUD010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2389
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71639"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..842
                     /locus_tag="VIQ99_00905"
     CDS             <1..842
                     /locus_tag="VIQ99_00905"
                     /inference="COORDINATES: protein motif:HMM:NF025930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEY9181723.1"
                     /translation="NSQPMGFYAPGQLVRSAREHGVEVRAVDVNYSDWESTLERSHDG
                     SAAVRLGMSLTKGLARDAGTRVCEARRAAPFANVQDLAERARLGRKDLGALASSGALK
                     GIASNRHRARWDVAGVERPTALLDRVRFAEALPMLRRPTEGEDIAADYRHVGISLGRH
                     PLALLRARLDEAGVLTARSVAESAQGSRVRAAGLVITRQRPGSASGVTFVTLEDETGY
                     LNLVVWEKLAERDRKILLGARLLGVSGAVQKQDGVLHVIAERLFDHSELLGRFVTYSR
                     DFH"
     gene            complement(855..1136)
                     /locus_tag="VIQ99_00910"
     CDS             complement(855..1136)
                     /locus_tag="VIQ99_00910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181724.1"
                     /translation="MKVKESDKKKEEEELEDEDEEDAEDEESEGTPETDNVGDPSVEI
                     NVEELIHELEVDTVARPDREQAAKRRLEELMERKRAKRELEDFDDYEIE"
     gene            complement(1277..>2389)
                     /gene="gspF"
                     /locus_tag="VIQ99_00915"
     CDS             complement(1277..>2389)
                     /gene="gspF"
                     /locus_tag="VIQ99_00915"
                     /inference="COORDINATES: protein motif:HMM:TIGR02120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HEY9181725.1"
                     /translation="RQLLPVEVAEVEARERKAQRHFSLFRGISGLDLAMLTRQLATLV
                     KAGLPLDEALLAVSEHTEKPRLKSIILGVRGKVLEGHSLAAGLDEFPYAFPTVYRATI
                     MAGEQAGQLDSVLDRLADYTESRHGLRQKVAQAMVYPVLLTVIALIIVIVMLIVVVPK
                     VVSVFETTGQELPVMTRALIALSNLVQHWWFLIAGGLIAAIVIVVRLLRHEHVRRRVH
                     GWLLRTPLIGRVTRGLNTARFTRTLSILTASGVPALEALRISASVIANLPMRAAVEHA
                     AIRVREGGAIGRSLAQSKLFPAISIHLISSGEASGELDKMLERAANHQESEMDGLLAT
                     MLSVLEPLLIVVMGLVVLAIVMAILLPIFQINQLVR"
BASE COUNT          418 a          737 c          779 g          455 t
ORIGIN      
        1 tgaacagtca gccgatgggg ttctacgctc cggggcagtt ggtgcgctcg gcgcgcgagc
       61 atggtgtcga ggtccgcgcc gtcgacgtca attacagcga ctgggaatcg accttggagc
      121 ggtcccatga tggcagcgca gccgtgcgtc tcggcatgag tttgacgaag gggttggcgc
      181 gcgatgccgg tacccgcgtg tgcgaagcac gcagagcggc tccattcgcg aacgtgcagg
      241 acttggcgga acgagcacgc ctcggccgca aggatctggg cgcgcttgcg tcgagtggtg
      301 ctctgaaggg gatcgcgagc aaccgccatc gcgcccgctg ggacgtggcc ggcgtggagc
      361 ggccaacggc gttgctcgat cgcgtgcgtt tcgcagaggc tttgccgatg ctgcgtcgcc
      421 cgaccgaggg cgaggacatc gccgccgatt atcgtcacgt cggcatcagc ttaggccgac
      481 atccgctggc cttgctgcgg gcgagattgg acgaggccgg ggtgctcacg gctcgctcgg
      541 tggcggaatc ggctcaggga tcacgagtac gcgcggccgg cctcgtcatt acgaggcaac
      601 ggcccgggag cgcgtccggc gttacgttcg taaccctcga agacgaaacg ggttatttga
      661 atctcgtggt ctgggaaaaa ctcgcggaac gggaccgaaa gatactgctc ggcgcgaggc
      721 tgctcggcgt gtccggggcc gtgcaaaaac aagacggggt gttacacgtg attgcggagc
      781 ggctgttcga tcacagcgag ctcctcggca gattcgttac gtattcgcgc gacttccact
      841 agcgcgcgaa cggcctattc gatttcgtag tcgtcgaagt cttcgagctc gcgtttggct
      901 cgtttccgtt ccatgagctc ctcgagccgg cgcttcgcgg cttgctcgcg atcgggacga
      961 gctaccgtgt cgacttcgag ctcgtgaatg agctcttcga cattgatctc tacggaaggg
     1021 tcgccgacgt tgtccgtttc aggcgtacct tcggactctt cgtcctccgc atcctcttcg
     1081 tcttcgtcct cgagctcttc ttcttctttt ttcttgtccg actctttgac cttcattcct
     1141 ccctccgtac cgagtcggtg aaccccgaaa gtcgcagtcg gcgcttttat aaacccggct
     1201 acatcagctt ggcaataccc ttggaaagag cttttgtgac cgagtgcaca acgcccgaaa
     1261 aaagggcgta agaggttcag cgaacgagct gattgatctg gaagatcggc agcaggattg
     1321 ccatgacgat cgcgagcacg acgagcccca tgaccacgat caacagcggc tcgagcacgc
     1381 tcagcatcgt ggccagcagg ccgtccatct cgctttcttg gtgattcgcg gctcgctcga
     1441 gcattttatc gagctcgccg ctggcttcgc cgctcgagat caggtgaata ctgattgccg
     1501 ggaaaagttt cgactgggct agagagcgac cgattgcgcc gccctcgcgg acgcgtatcg
     1561 cagcgtgctc gacggccgcg cgcatgggca gattcgcgat tacggacgcg ctgatacgca
     1621 gcgcctccaa ggcgggcacg ccgctcgccg tgaggatgct gagcgtgcgc gtgaagcgtg
     1681 cggtgttgag gccgcgcgtc acgcggccga tcagcggcgt gcgcagcagc cagccgtgga
     1741 cgcgcctgcg cacgtgctcg tgccggagca ggcgaacgac gatcacgatc gcggcgatca
     1801 agccgcccgc aatcaggaac caccagtgct ggaccaggtt cgacagggcg atcagggccc
     1861 gcgtcatcac cggcagctct tggcccgtgg tttcgaacac gctgacgacc ttgggcacga
     1921 ccacgatcag catcacgatc acgatgatca gcgcgatcac ggtcagaagg acggggtaga
     1981 ccatcgcctg cgcgactttt tgccgcaggc cgtggcgcga ctccgtgtag tccgcgagtc
     2041 gatcgaggac cgagtcgagc tgcccggctt gctcaccggc catgatagtc gcgcggtata
     2101 cagtcgggaa cgcgtacgga aactcgtcga gaccggccgc cagcgaatgg ccttcgagga
     2161 ctttgccgcg cactcccagg atgatgctct tcaggcgcgg cttctcggtg tgctcgctga
     2221 cggcgagcag cgcctcgtcg agcggcagcc ccgctttcac gagcgtcgcg agctgacgag
     2281 tcagcatcgc gagatccagg cccgagatgc ctcggaacaa cgagaagtgg cgctgtgcct
     2341 tgcgctcacg cgcctcgacc tcggcgacct cgaccggcag cagctgccg
//
LOCUS       DATCUD010000062         2534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78773, whole genome shotgun sequence.
ACCESSION   DATCUD010000062 DATCUD010000000
VERSION     DATCUD010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78773"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..780)
                     /locus_tag="VIQ99_00920"
     CDS             complement(<1..780)
                     /locus_tag="VIQ99_00920"
                     /inference="COORDINATES: protein motif:HMM:NF039296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5924 family protein"
                     /protein_id="HEY9181726.1"
                     /translation="MKSLFLRLLTLERRYPWVLPLASFLTGWLGFAMVKRGEGLARII
                     AVLALLGWFWLLIEPWIRRRIERRRPRAGNLVVNFVTQSLQQELLFFSLPFLIGATQL
                     DVGQLAFTGLVAVAALLSTIDPVYERVIAKRAARRMSFHAFCSWIAALVVLPMATSMP
                     LEQALPISLIGATAWLLLTLPMSLHSLVRRRSQLVWVAGMIGVPILFWQLRAQVPPAG
                     LAVTDARITQTIDGLTPGLSVRRVRQEDLDEGVIAFAAIRAP"
     gene            complement(820..2055)
                     /locus_tag="VIQ99_00925"
     CDS             complement(820..2055)
                     /locus_tag="VIQ99_00925"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY9181727.1"
                     /translation="MAAFSFNEFYQRNRRIVIWVILFGLLWLLRDFFAVVFLTFVLAI
                     MAVPATDFAMRHVKRLPHWLAVTIVYVIFLVVLVSFVRFVVPSVAAELNRMIGNLPAI
                     EITLIENKNRLVDRYPTLRQPLNGFIRSAVADDRLAIVDSQMRIERDRLGLTDEAVSL
                     AEDSVVAPTGALAEYFNRRDQLLLNALIAVQFQQVRQYAPAVVNMLYRATATVLLALL
                     FSYLILIDMNRLKAGISRLRNSRVGDFYAEAAQPIARFGILLGRAIEAQAAIAVVNTA
                     LTLVGLLLLDIPLVAMLSVIVFVCSFVPVLGVFISTTPIVLVALNAGGPQLSLVAIGL
                     VVVIHAIEAYLLNPVIYGKHLKLNPVLTLIILYVGYHAFGLWGMLLGVPVARYFFHDV
                     LGVPFRERNPPAPPAPRAA"
     gene            complement(2123..>2534)
                     /locus_tag="VIQ99_00930"
     CDS             complement(2123..>2534)
                     /locus_tag="VIQ99_00930"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEY9181728.1"
                     /translation="FLVGLLHEIGKLYILMRAKDIGPALEVDAALQSVLGGWHARVGR
                     AVIETWELPSELAVAVGDHESVSLEAADPPTLTAVLAVANYLAEHSEAACADPEFHSK
                     APSFGALGMDQRTFDWLIRSADVDVRLLMIAFGV"
BASE COUNT          550 a          840 c          800 g          344 t
ORIGIN      
        1 cggtgcccgg atcgcggcga atgcgatgac gccctcatcg aggtcctctt gccggacccg
       61 ccgcacggac agtcccggcg tgagcccgtc gatcgtctgc gtgatccgcg cgtcggtgac
      121 ggccaacccg gccggcggca cttgcgcccg cagctgccag aacagtatcg gcacaccgat
      181 catgccggcg acccatacca gctggctgcg gcgccgcacc agcgaatgca aggacatcgg
      241 cagcgtcaac agcaaccaag cggtcgcgcc gatcaacgag atcggcagcg cctgctcgag
      301 cggcatcgac gtcgccatcg gcaagacgac gagcgcggcg atccagctgc agaacgcgtg
      361 aaacgacatg cgacgtgccg ctcgcttcgc aatcacgcgc tcgtacacag ggtcgatcgt
      421 gctcagcagc gccgccacgg caacgagccc agtgaacgcc aactgaccga cgtccaattg
      481 cgtcgcgccg atcaggaacg gcaggctgaa gaacagcagc tcctgctgta gcgactgggt
      541 cacgaagttg acgacgagat tgccggcgcg tggccggcgc cgctcgatgc gccggcgtat
      601 ccacggctcg atcaagagcc agaaccaccc gagcagcgcg agcaccgcga tgatccgcgc
      661 gagcccttcc ccgcgcttca ccatcgcgaa gccgagccaa ccggtcaaga agctcgcgag
      721 cggcaacacc cagggatacc gacgctcgag cgtcagcaga cgcagaaaca aggatttcac
      781 gcggcagagc ctcgcacgaa accaaccgtc gagatgattc tacgcagcgc gcggcgcggg
      841 cggtgcgggc gggttgcgct cgcgaaacgg cacgccgagc acgtcgtgaa agaagtatcg
      901 cgcgacgggc acgccgagca gcattcccca gagaccaaat gcgtggtagc cgacgtacaa
      961 gatgatcagc gtgagcacgg ggttcaactt caggtgcttg ccatagatga ctggattgag
     1021 cagataggcc tcgatcgcat gaatcacgac gacgaggccg atcgcgacga gcgacagctg
     1081 cggcccgccg gcgttcagcg ctacgagcac gatcggtgtc gtcgagatga acacgccgag
     1141 cacgggaacg aagctgcaga cgaagacgat caccgacagc atcgccacga gcggaatgtc
     1201 gagcagcaac aaacccacga gcgtgagcgc cgtgttcacg accgcgatcg cggcctgcgc
     1261 ttcgatcgcg cgtccgagca agatgccgaa gcgcgcgatc ggttgcgcag cctccgcata
     1321 gaagtcgccg acgcgcgagt tccggagacg gctgataccg gctttcaggc gattcatgtc
     1381 gatcaagatc aggtagctga acaacagcgc caacaacacg gtggcggtcg cgcgatacag
     1441 catgttcacg acggccggcg cgtactggcg cacctgctgg aactgcacgg cgatcaacgc
     1501 gttcagcaac agctgatccc ggcggttgaa gtactccgcg agtgcgcccg tcggcgctac
     1561 gacgctgtcc tcggccaacg atacggcctc gtcggtcaga ccgagccggt cgcgctcgat
     1621 ccgcatctgc gaatccacga tcgcgagccg gtcgtcggca accgcgctgc gaatgaagcc
     1681 gttcaacggc tggcgcagcg tcggataccg gtcgacgagc cggttcttgt tttcgatcaa
     1741 cgtgatctcg atcgcgggca gattgccgat catgcgattc agctcggccg ccacgctcgg
     1801 caccacgaac cgcacgaacg agacgaggac gacgaggaag atcacgtaga caatcgtcac
     1861 ggccagccaa tgcggcaaac gcttcacgtg acgcatcgcg aagtccgtgg ccggcacggc
     1921 catgatcgcg agcacgaacg tcaagaacac gactgcgaag aaatcccgca acagccacag
     1981 caggccgaac aggatgaccc agatgacaat gcgccggttg cgctggtaga actcgttgaa
     2041 gctgaacgcg gccactggcg cctagtatag ggactcgcgc gacgccgcgg ggaagcaaaa
     2101 cgacggcggg cggatcgaga ccctagacgc cgaaggcgat catcaacaat cggacgtcga
     2161 catcggccga acgaatcagc caatcgaacg tgcgttgatc catgccgagc gcaccgaagc
     2221 tcggcgcctt cgagtgaaac tccgggtcgg cgcatgcggc ttcgctgtgc tctgcaagat
     2281 agttggcgac ggccaggacg gcggtcagcg tcggcggatc cgcggcctcg aggctcacgc
     2341 tctcgtggtc gccgaccgcg accgcaagct cggaaggcaa ctcccaggtc tcgatcaccg
     2401 cgcgcccgac gcgcgcgtgc cagccaccga gcaccgactg cagcgccgcg tccacctcga
     2461 gcgccgggcc gatgtccttg gcccgcatca ggatgtacag cttaccgatc tcgtgcagca
     2521 atcccacgag gaac
//
LOCUS       DATCUD010000063         2114 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78795, whole genome shotgun sequence.
ACCESSION   DATCUD010000063 DATCUD010000000
VERSION     DATCUD010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78795"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1743
                     /locus_tag="VIQ99_00935"
     CDS             <1..1743
                     /locus_tag="VIQ99_00935"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9181729.1"
                     /translation="QYTITGDLQRVGADFRALVDTLEAAWEQQQPPGEGARALLQRVA
                     AQPQQLPESLFQMQGSASQEARLSNSHETFTTAIGDAAVLAGQLIDDQTEYAAAVAFL
                     RESGATVIQDIRAAGLDRAAADAFQLVVGTLDFAGKDASVRGAELERLLLTLSRDQRV
                     DQMPGDVALLRSSVATILTNKPLIESRLKQLVETPVGEHAEALGIAAQDMYTIAATRI
                     EQARLMLGVYAVVLLVAVGFVAFRLHGSYREINRTNADLAVLNESLEQRVATRTQELS
                     GTLADLKESQVQLVQAEKMSSLGQLVAGISHEINTPLLYLANNAELVRERLEPLRDFI
                     ASCTAAFSIKSEDFPDRATYQTQFVNALKDVKTQLRDFELEATVEEIQDLTRDSIAGL
                     GELTEMAQSLKDFSRLDRAPIASFDVNAGLDKTLVIAKNIVKNKALVSKFYGEVPEIE
                     CSPSQINQVFLNIITNAAQAIESHGEIVIETKLRDENHVAIRIADTGCGIPEENLSKI
                     RDPFFTTKEVGTGTGLGLSIVDEIIRSHHGELLVESVVGKGSAFTVILPIRRPDAAAP
                     QPAEDALPPLKEAV"
     gene            1747..>2114
                     /locus_tag="VIQ99_00940"
     CDS             1747..>2114
                     /locus_tag="VIQ99_00940"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9181730.1"
                     /translation="MQVQQAQVQRPRLLFVDDEQRVLNSMRIMFRRQFDLFLASHGAE
                     ALDIVRDKDIDVIVADHRMPKMTGVEVLSKVRALSPRTVRILLTGYADLDAVEGSIND
                     SEVFRFLTKPCAPQQLRETI"
BASE COUNT          421 a          694 c          667 g          332 t
ORIGIN      
        1 caatacacga tcaccggcga tctgcagcgc gtcggcgcgg actttcgcgc gctcgtcgat
       61 acgctcgagg cggcgtggga acagcagcaa ccgccgggtg aaggcgctcg cgcgctgctc
      121 caacgtgtcg cggcccaacc gcagcagctc cccgagtccc tgttccagat gcagggcagc
      181 gcgagccagg aagcccgctt gagcaacagc cacgaaacgt tcacgacggc gatcggcgat
      241 gccgcagtgc tcgcggggca gctgatcgac gaccaaacag agtacgccgc ggccgtcgca
      301 ttcctccgcg agtcgggcgc cacggtgatt caggacatcc gtgcggcggg gctcgatcgc
      361 gcggccgccg acgcattcca gctcgtcgtc ggcacgctcg acttcgccgg caaggacgcg
      421 tcggtccgcg gcgccgagct cgaacgcctg ctcctgacgt tgagccgcga tcaacgcgtc
      481 gaccaaatgc ccggcgacgt cgcgctgctg cgaagctccg ttgcgacgat cctcacgaac
      541 aagccactga tcgaaagcag gctcaagcag ctcgtcgaga cgccggtcgg cgagcacgcc
      601 gaggcgctcg gcatcgcggc gcaggacatg tacacgattg cggcgacgcg catcgagcaa
      661 gcgcgcctaa tgctcggcgt ctatgccgtc gtgctactcg tggccgtcgg cttcgtcgcg
      721 ttccgactcc acggtagcta tcgcgagatc aaccgcacca acgccgatct cgcggtattg
      781 aacgaatcgc tcgagcaacg cgtggccact cgcactcaag agctcagcgg cacgctggcg
      841 gacctcaaag agtcgcaggt acagctagtg caggcggaaa aaatgtcgtc gctgggccag
      901 ctggtcgccg gcatcagcca cgagatcaac acgccgctgc tctatctcgc gaacaacgcg
      961 gagctcgtcc gcgagcgact cgagccactg cgcgatttca tcgcgagctg cacggccgcg
     1021 ttctcgatca agtcggagga cttcccggat cgcgcgacct atcaaactca gttcgtgaac
     1081 gcgctgaagg acgtgaagac ccagcttcgc gatttcgagc tcgaggcgac cgttgaggag
     1141 atccaagacc tcacccgcga cagcatcgcg ggcctcggcg agctcacgga gatggcacag
     1201 agcttgaagg atttcagccg gttggaccgc gcgccgatcg caagcttcga cgtcaacgcc
     1261 ggcctcgaca agacgctggt gatcgccaag aacatcgtca agaacaaggc gctggtcagc
     1321 aagttctacg gcgaggtacc cgagatcgaa tgctcgccgt cgcagatcaa ccaggtattc
     1381 ctgaacatca tcacgaacgc tgcgcaagcc atcgagagcc acggcgagat cgtgatcgaa
     1441 acgaagctcc gcgacgagaa tcacgtggcg atccgcatcg ccgacacggg ctgcggcatc
     1501 cccgaggaga acttgagcaa gatccgcgac ccgttcttca cgaccaagga agtcggcacg
     1561 ggcacgggct tgggtctgtc gatcgtcgac gagatcatcc gcagtcacca cggcgagctg
     1621 ctcgtcgagt ccgtcgtcgg caagggttcc gcgttcacgg tcattctgcc gatccggcga
     1681 cccgacgccg ccgcgcccca gccggcggag gacgcgctgc cgccgctcaa ggaagcggtg
     1741 tagctcatgc aggtgcagca agcacaagtc cagcgaccgc ggctcctgtt cgtcgacgac
     1801 gagcagcggg tgttgaactc gatgcggatc atgttccgtc gccagttcga tttgttcctg
     1861 gcgtcgcatg gcgccgaggc gctggacatc gtccgtgaca aggacatcga cgtgatcgtg
     1921 gccgatcacc gcatgccgaa gatgacgggc gtcgaagtgt tgtcgaaagt ccgcgcgctg
     1981 tcgccgcgaa ccgtgcgcat tctgctgacg ggctatgcgg atctcgatgc ggtcgaaggc
     2041 tcgatcaacg acagcgaagt cttccggttc ctgacgaagc cgtgcgcgcc acagcagctg
     2101 cgcgaaacga tcga
//
LOCUS       DATCUD010000064         1513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7716, whole genome shotgun sequence.
ACCESSION   DATCUD010000064 DATCUD010000000
VERSION     DATCUD010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7716"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1506
                     /locus_tag="VIQ99_00945"
     CDS             <1..1506
                     /locus_tag="VIQ99_00945"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9181731.1"
                     /translation="FDGTEFLVTTDDIVEFRENQTIELHLSGSTPNGRISWLAGYYSL
                     EEDITRRFYRWGMWEFVTPNTVGGVAPTVNTLPSEYVRQTAILLGLNGVINSPPGQPV
                     VNSGGNMLTPNAAPVLFAPAGRYPWNFGFISADQLTNSFDDDEAWFGEATFGLTEKLD
                     ITLGARLSDKTGGDISYTPIDAFRTADPGVRPQGDMLAGTAPVVFTDTDQPTIETYKF
                     AVTYRPTESMMLYATYAEGFTSASEPLVNIGATAVPPTGCTNRIPGGNNVRCTLQPEL
                     VDTNEIGLRSDWLDGQLRFNATYFDSQWEGMRVWLLPRDAAGNTQPFPYQDGSGEGTA
                     DGFEFEVVWVPTDRLQMNFGLGLIDTNYVQQGFFDGTTGQYPGAPFAYAAEESGTIGA
                     NYEIPLGNGGHILLVGNYGYMGDYARDSAYQRTLVDANGKPVLEPGYGILNARFVYEP
                     ADRNFAIEIWGKNLTDELYINGGFDTRDTWGYDFAIVGRSREYGVGLSFTF"
BASE COUNT          303 a          466 c          462 g          282 t
ORIGIN      
        1 ttcgacggca ccgagttcct cgtcaccacg gacgacatcg tcgaatttcg cgagaaccag
       61 acgattgagc tgcacctgtc gggctcgaca cctaacggcc gtatcagctg gctcgccgga
      121 tactattcgc tcgaggaaga catcactcga cgcttttatc gctggggcat gtgggagttt
      181 gtcaccccga acaccgtcgg cggcgtggcg ccgaccgtca atacgctccc gagcgagtac
      241 gtgcggcaga cggccatctt gctcggcctg aatggcgtca tcaattcgcc accgggtcag
      301 cccgttgtga attcgggcgg caacatgctg acgccgaacg ccgcgcccgt cctgttcgca
      361 ccggcaggcc gttacccgtg gaactttggc ttcatcagtg ccgaccagtt gacgaactct
      421 ttcgatgacg atgaggcctg gttcggcgaa gcaacgttcg gactgaccga gaagctcgat
      481 atcacgctcg gggctcgact cagcgacaag accggcggcg acatcagcta cacgcctatc
      541 gacgcgtttc gcaccgccga tcccggcgtg cgcccgcagg gcgacatgct cgcgggaaca
      601 gcgcctgtgg tcttcaccga tacggaccag ccgaccatcg agacctacaa gtttgcggtc
      661 acgtaccgac caaccgagtc gatgatgttg tatgcaacgt acgccgaagg gttcacgtcc
      721 gcgagcgagc ccctcgtcaa catcggcgcg accgcggtgc cgccgacggg ttgcacaaac
      781 cgcattcccg gtggcaacaa cgtacgatgt acgctccagc ccgaactggt cgacaccaat
      841 gaaatagggc tgcgctcaga ttggctcgac ggacaactgc gattcaatgc gacgtatttc
      901 gactcgcaat gggagggcat gcgcgtttgg ctgttgccga gagatgcggc gggcaacacg
      961 cagccattcc cctatcagga tggcagcggc gagggaacgg cggatggctt cgagttcgag
     1021 gtcgtttggg tcccgaccga caggctccag atgaacttcg gtttgggtct gatcgacacg
     1081 aactacgttc aacaggggtt cttcgacggc actacgggcc agtacccggg cgcgccgttc
     1141 gcatacgccg cggaagaaag cggaacgatc ggcgccaatt acgagattcc actcgggaat
     1201 ggcggccaca tcctgctcgt cggcaactat gggtacatgg gtgactacgc gcgcgattcg
     1261 gcgtatcaac gcacgctggt cgacgcgaac gggaaaccgg tcctcgagcc cggctacggc
     1321 atcctgaatg cgcggttcgt ttacgagccg gcggatcgca acttcgcgat cgagatctgg
     1381 ggcaagaacc tgaccgacga gctctacatc aatggcggct tcgatacgcg cgacacgtgg
     1441 ggctacgact tcgcaatcgt cggtcgctcg cgtgaatacg gcgtgggttt gagcttcacg
     1501 ttctagtcct tcg
//
LOCUS       DATCUD010000065         2908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71672, whole genome shotgun sequence.
ACCESSION   DATCUD010000065 DATCUD010000000
VERSION     DATCUD010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71672"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..686
                     /gene="hpnH"
                     /locus_tag="VIQ99_00950"
     CDS             <1..686
                     /gene="hpnH"
                     /locus_tag="VIQ99_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HEY9181732.1"
                     /translation="EGTFDKAVAAIKNARDKGFRVTANCTLYAGEDPEDVANFFDFCM
                     TLGVEGVMMSPGYSYQHAPRQDVFLGRRKSKELFREIFRIGKKRGSKWHFNQSSLFVD
                     FLAGNQSYQCTPWANPTYNVFGWQKPCYLLVDEGYAKSFKELMETTEWEKYGVGRNPK
                     CDNCMAHCGYEGTAVEHTISSPLTALNVFLFGPRLEGEMAPELPVLHSGAPGVAIPVD
                     QIGRINRKS"
     gene            728..1858
                     /locus_tag="VIQ99_00955"
     CDS             728..1858
                     /locus_tag="VIQ99_00955"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012700671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9181733.1"
                     /translation="MTVLLAFTGFALVAWIAVLVAPAQAHRTRERLEADPAAPDDLAS
                     VAVLIPARDEAESIGRTIAALAKQGRNLAVVVVDDQSSDGTADVARAASREIDLTVIS
                     GRPLPDGWAGKLWALEQGLAAVERPFVLLLDADIELVPRMVPTLLREAHARDASLVSI
                     MAELHCATFWERLLTPAFVFFFKLLYPFAASNDPRRRTAAAAGGCMLVRTDVLRAIGG
                     FAAIRDALIDDCTLAAAVKRHRSPIWLGMSHSVRSLRVYAELREFWRMVSRSAFTQLR
                     YSTPSLLLATLLMVATLLAPVAGVLVASAEPHIALLAVAAWLAMSAAYWPIVRFYRLP
                     AAWALTLPIAGALFLAMTWSSALDHWRGASAQWKNRVYVGRG"
     gene            complement(1890..2288)
                     /locus_tag="VIQ99_00960"
     CDS             complement(1890..2288)
                     /locus_tag="VIQ99_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015171063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY9181734.1"
                     /translation="MQQDDDPAMITHTGGCHCGRVRFEVIAPASFEVTDCDCSICSKS
                     GYLHLIVPKSRFRLLSGADVLTTYEFNTRTAKHLFCSVCGIKAFYVPRSHPDGYSVNA
                     RCLDEGTVERMTVVKSDGKNWEKTHGGRAK"
     gene            complement(2272..2427)
                     /locus_tag="VIQ99_00965"
     CDS             complement(2272..2427)
                     /locus_tag="VIQ99_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181735.1"
                     /translation="MDTTSQRAKVIELFEKHRAAPGAPPRAVYDSFRGLRRFNAFVRA
                     RIDAAGR"
     gene            complement(2437..>2908)
                     /locus_tag="VIQ99_00970"
     CDS             complement(2437..>2908)
                     /locus_tag="VIQ99_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9181736.1"
                     /translation="MRIEIDDVSRPEVLALLEEHLRNMHEITPSEFVFAFDANKLRAP
                     DVVFWTAWDDETLLGCAALKELSPTRGEIKSMRTPAKRRRRGVGRALLNHVLDVARKR
                     GYRELLLETGNHPAFTPAQTLYRSVGFELCGPFSDYEDNGFSVFMSLRLDGNAS"
BASE COUNT          466 a          896 c          992 g          554 t
ORIGIN      
        1 gcgagggcac gttcgacaag gccgtcgccg cgatcaagaa cgcgcgcgac aagggtttcc
       61 gcgtcacggc gaactgcacg ctttacgcgg gcgaggatcc cgaggacgtc gcgaactttt
      121 tcgacttttg catgacgctc ggggtcgagg gcgtgatgat gtcgccgggc tacagctacc
      181 agcacgcgcc gcgccaggac gtgttcctgg gccgccgcaa gtcgaaggag ctgttccgtg
      241 aaatcttccg catcggcaag aaacgcggca gcaagtggca cttcaatcag tcgagcctgt
      301 tcgtcgattt cctggccggc aatcagagct accagtgcac gccgtgggct aatccgacgt
      361 acaacgtgtt cggttggcag aagccgtgct acctgctggt cgacgaaggt tacgccaaga
      421 gcttcaaaga gctcatggag accacggagt gggagaagta cggcgtcggc cggaatccga
      481 agtgcgacaa ctgcatggcg cactgcggat acgagggcac ggcggtcgag cacacgatct
      541 cgagcccgtt gacggcgttg aacgtgtttc tgttcgggcc gcggctcgag ggcgagatgg
      601 cgccggagtt gccggtgctg cacagcggtg cgcctggcgt cgcgattccc gtggatcaga
      661 tcgggcggat caaccgcaag tcctagtcga ttcgcgcacg gcgagaaatc tgtagtaacg
      721 acctcccgtg acagtactct tggcgttcac ggggtttgcg ctcgtcgcgt ggattgccgt
      781 tctggtggcg ccggcgcagg cgcatcggac gcgcgagcgg ctcgaggccg atcccgcggc
      841 gcccgacgac ttggcgtctg ttgccgtgct gattccggcg cgggacgagg cggagtccat
      901 cggccggacc atcgccgctc tggcgaagca ggggcgcaat ctcgcggtgg tggtggtcga
      961 cgatcagtcg agtgacggaa ctgcggatgt cgcgcgtgcc gcttctcgtg agatcgacct
     1021 tacggtgatc tccggccgtc ctttgcccga cgggtgggcg gggaagttgt gggcgctcga
     1081 gcaggggctc gccgcggtcg agcggccgtt cgtgttgttg ctcgatgcgg atatcgagct
     1141 ggtgccccgc atggtgccga cgctgctgcg cgaggcgcat gcacgcgatg cgagcctcgt
     1201 gtcgatcatg gcagagctgc attgcgcgac gttctgggag cgcttgctga cgcccgcgtt
     1261 cgtgttcttc ttcaagctgc tgtacccgtt cgcggccagc aacgatccgc gccggcgcac
     1321 ggcggctgcg gccggcggct gcatgctcgt gcgcaccgac gtgctgcgcg cgatcggcgg
     1381 ctttgctgcg attcgcgacg cgttgatcga cgattgcacg ctcgcggcgg ccgtgaagcg
     1441 gcatcgctcg ccgatctggc tcgggatgag tcattctgta cggagcttgc gcgtgtacgc
     1501 cgagctgcgc gagttctggc gcatggtcag ccgcagcgca ttcacgcagc tcaggtactc
     1561 gacgccgtcg ttgttgctcg cgacgctgtt gatggttgcg acgttgctcg cgcccgttgc
     1621 gggcgttctt gtggcgtcgg ccgagccgca catcgccttg ttggctgtgg ccgcgtggct
     1681 cgcgatgagc gcggcgtact ggccgatcgt ccgcttctat cggttgccgg ccgcgtgggc
     1741 actcacctta ccgattgccg gcgcgttgtt tctcgcgatg acctggagct cggcgctcga
     1801 tcattggcgc ggcgcaagcg cgcagtggaa gaatcgcgtc tacgtcgggc gcgggtaggt
     1861 ctacggcgcg gccgagcgcg gaaaccgtct cacttcgcgc gcccaccgtg cgtcttttcc
     1921 cagttcttgc cgtcggactt cacgacggtc atgcgctcga cggttccctc gtccaaacaa
     1981 cgcgcgttca cgctgtagcc gtcgggatgt gagcgcggaa cgtaaaacgc tttgatcccg
     2041 cacacggagc aaaacaggtg tttcgcggtt cgcgtgttga actcgtacgt ggtgagaacg
     2101 tccgctccag acagcagccg gaaccgtgac ttcggcacga tcaggtgcag atacccggac
     2161 ttcgagcaga tcgagcaatc gcagtccgta acctcgaagc tcgcgggtgc gatgacctcg
     2221 aagcgcacgc gcccgcaatg gcaaccaccg gtgtgcgtga tcatcgcggg gtcatcgtcc
     2281 tgctgcatcg atccgggccc gaacgaatgc gttgaaacgc cgcaagccgc ggaagctgtc
     2341 gtacacggcc cgcggcggcg cgcccggcgc ggctcgatgt ttctcgaaca gctcgatgac
     2401 cttggcgcgt tgcgacgtcg tgtccatgcg agatgtctac gaggcgttgc cgtccaaacg
     2461 cagggacatg aacacgctga agccgttgtc ttcatagtcg ctgaaaggcc cgcacagctc
     2521 gaagccgacg ctgcgataca gcgtttgagc cggcgtaaac gccgggtggt tgccggtctc
     2581 gagcagcagc tcgcggtatc ctcgtttcct ggccacgtct agaacgtgat tcagcagggc
     2641 gcggccgaca ccgcgccggc gacgcttggc cggcgtgcgc atcgacttga tctcgcctcg
     2701 agtcggggac agctccttca gcgcagcgca gccgagcagc gtctcgtcgt cccaggccgt
     2761 ccagaaaacg acatccggcg cgcgcagctt gttggcgtcg aacgcgaaca cgaactcgga
     2821 tggagtgatc tcgtgcatgt tccgcaggtg ctcctcgagc agcgcgagga cctcgggcct
     2881 ggagacgtcg tcgatctcga tcctcatg
//
LOCUS       DATCUD010000066         1962 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36173, whole genome shotgun sequence.
ACCESSION   DATCUD010000066 DATCUD010000000
VERSION     DATCUD010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36173"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VIQ99_00975"
     CDS             <1..511
                     /locus_tag="VIQ99_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181737.1"
                     /translation="VMGARGIATSALDDGDVTRLYLELEQLWQRGSIAVAGFTQFGPM
                     LVVERLALERGMRLAMRVDHGAASTGSLLHRLVGPADTLALAAGFDALSADWPGLMAT
                     LACRVAADDSPSRTMELLTAELAPPTLAASTESSFIHYYTPQAEQQGHGPALNGLLYS
                     WVVAPRERG"
     gene            516..>1962
                     /locus_tag="VIQ99_00980"
     CDS             516..>1962
                     /locus_tag="VIQ99_00980"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9181738.1"
                     /translation="MPAPPPGVSAADFAIALRKLEAAVGEQWVFKSDEDVALYRDAYS
                     PERDEPTERLASAAVAPISVEQVQQVVRIANEHKLPLYPISTGKNLGYGGSAPILSGS
                     VVVDLKRMNRILSVDAGRCQAIVEPGVSYFDLYRHIEERNLEVWIDTPDPGWGSVVGN
                     ALDHGVGYTYGQYRDHFGSHCGMEVVLPNGELMRTGMAALANDASWADYKYGFGPYVA
                     GLFGQANFGIVTKMGFWLLPRPEAYRRGTVSVPKRRDIVKLVEHVNYLENLGLIGMPG
                     FRSPLGFAQAREPELRALIAKPDGPSDEELDRFAEAKGLPSWSVELQFYGPERTIAGS
                     WDYVQQRIGASIPGARFEEGPVYRFPLTAQQQAEVQRVHRLVDIGIPNMSIFAIAGGR
                     TPQNPDSADGGQFYFAPMIPRTGEAILEANRVLGQAYRDAGLPYNQYFSAPACWHYRA
                     FIMITSLPVSRLDPEINRRSRAAFQAIAKVAA"
BASE COUNT          320 a          651 c          666 g          325 t
ORIGIN      
        1 cgtgatgggc gcgcgaggca tcgcgacgag cgcgctcgat gatggcgacg tcacgcggct
       61 ctatctcgag ctcgagcagc tttggcagcg tggctcaata gcggtcgccg ggttcacgca
      121 attcggtccg atgctcgtcg tcgagcgcct ggcgctcgag cgcggcatgc gcttggcgat
      181 gcgcgtcgat catggcgccg caagcaccgg ctcgctgctg catcgcctcg tggggcccgc
      241 ggacacgctc gcgctcgcag cgggattcga cgccttgagt gcggattggc cggggctcat
      301 ggcgacgctc gcgtgtcgcg tcgccgcgga cgattcaccg tcccgcacca tggagctcct
      361 gacggcggag cttgcgccgc caacgctggc ggcgagcacc gagtcgtcgt tcatccacta
      421 ctacacgccc caggccgagc agcaagggca tggtcctgcg ctgaacgggc ttctgtattc
      481 ctgggtcgtc gcgccacgcg agcgagggta ggccgatgcc agcaccaccg ccgggagtca
      541 gcgccgcgga cttcgccatc gcgctccgca agctcgaagc cgccgtcggc gagcaatggg
      601 tcttcaagtc ggacgaagat gtcgcgctct atcgagacgc ctattcgccg gagcgtgacg
      661 agccgacgga gcgcctcgcg tcggcggcgg tcgcgccgat cagcgtcgag caggtgcagc
      721 aggtcgtgcg catcgcgaac gagcacaagc ttccgctgta tccgatctcg accggcaaga
      781 acttgggcta cggcggctcg gcgccgattc tctcgggcag cgtcgtcgtc gatttgaagc
      841 gcatgaaccg gatcctgtcc gtggacgcag gccggtgcca agcgatcgtc gagcccggcg
      901 tgtcgtattt cgacctgtat cggcacatcg aagagcgcaa cctcgaggtc tggatcgaca
      961 caccggaccc cggatggggc agtgtggtcg gcaacgcgct cgaccatggc gtcggctaca
     1021 cgtacgggca gtatcgcgac catttcggca gtcactgcgg catggaggtc gtgctgccga
     1081 acggcgagct catgcgcacc ggaatggccg cgctcgcgaa cgatgcctcg tgggccgact
     1141 acaaatacgg cttcgggcct tacgtcgcgg ggcttttcgg ccaagccaac ttcggcatcg
     1201 tgacgaagat gggcttttgg ctgttgccgc gacccgaggc gtatcggcgc ggcaccgtgt
     1261 ccgtgccgaa gcggcgcgat atcgtcaagc tcgtcgagca cgtgaactat ctcgagaacc
     1321 tggggttgat cggcatgccg ggctttcgca gcccgctggg tttcgcgcag gcgcgcgagc
     1381 ccgagctgcg agcgctcatc gcgaagccgg atgggcccag cgacgaggag ctcgaccgct
     1441 tcgccgaggc gaaaggccta ccgtcgtgga gcgtcgagct ccagttctac ggccccgaga
     1501 ggacgatcgc cggcagctgg gactacgtgc agcagcgcat cggtgcgtcg attcccggcg
     1561 cgcggttcga ggagggcccc gtttaccgct tcccgttgac cgcgcagcaa caggcggagg
     1621 ttcagcgcgt gcaccggctc gtcgacatcg gcatcccgaa catgagcatc ttcgcgatcg
     1681 cgggcggacg cacgccgcag aaccccgact cggccgacgg cggtcaattc tatttcgccc
     1741 cgatgattcc ccgcacaggc gaggcgatcc tcgaggcgaa ccgcgtgctg ggacaggcct
     1801 accgcgacgc cggcttgccg tacaaccagt acttctcggc gccggcgtgc tggcactatc
     1861 gcgcattcat catgatcacg agcctgccgg tgagcaggct cgaccccgag atcaatcgcc
     1921 gctcacgagc cgcattccag gcgatcgcga aggtcgccgc gg
//
LOCUS       DATCUD010000067         2200 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43232, whole genome shotgun sequence.
ACCESSION   DATCUD010000067 DATCUD010000000
VERSION     DATCUD010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43232"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VIQ99_00985"
     CDS             <1..278
                     /locus_tag="VIQ99_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020648138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9181739.1"
                     /translation="HTFGELCLSPVGLSNVTKLAPPRFVGQMMGTWFLGSAVGNLFAG
                     LIGGEIGGADASEIPARLMEMTLVGVGAGALMLVFSRPIRNWMGGVR"
     gene            286..>2200
                     /locus_tag="VIQ99_00990"
     CDS             286..>2200
                     /locus_tag="VIQ99_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020650749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEY9181740.1"
                     /translation="MSAQPLPPQLTARAIILAVVLAMILAAANTYLGLFAGMTIASAI
                     PAAVVSMAVLRVLGGGGILENNIVQTGGSAGASLASGVIFTIPALVILGFWDDFDFLW
                     VVAIAALGGLLGVLFSVPLRRSLIVDQKLAFPEGKAAAEVLRTGENPAQGVKILGGAA
                     LGGGLVKLAAASGLGLIPDTAAVAAYAGRSIAYFGTNLSPALLAVGYIVGLNIGTVVL
                     LGGVISWNIAIPLYAAFGLDGNPDLASTVAGLPAEDAANVLWSRQIRYLGVGAMLVGG
                     LWALFSLRKSLLSGVKSGLAAARAGSQTAIAHTERDLPMQGVLIGIVLFALPLLVLYQ
                     NIVGSFAVSVPMTIIMIVAGFLFCSVSAYMAGLVGTSNNPVSGMTIGTILFSAVVLLV
                     LMGPGSATGPVAAIMIGAVVCCAACIAGDNLQDLKCGYIVGATPWRQQVMLAIGAFAS
                     ALVMAPVLNLLARAYGIGIPTEAHPDPLIAPQATLMASVARGLFGGSLPWPTIAVGAG
                     IGAAIIALDEWLKAKGAKFRTPVLAAAVGIYLPLELSVPIFLGGLLAWFCERTLKARD
                     PGATVEHVERIARKGMLFAAGMITGEALMGIVIAIPIVVYSRADVLALPANLRIGSSA
                     VGEWLGLAVLALLA"
BASE COUNT          294 a          718 c          753 g          435 t
ORIGIN      
        1 tgcatacgtt cggcgagctc tgtttgtcgc cggtcggcct ctcgaacgtc acgaagctcg
       61 ccccgcctcg cttcgtgggt cagatgatgg gtacctggtt cctcggctcc gcggtcggaa
      121 acttgttcgc cggactgatc ggcggcgaga tcggcggcgc ggacgcgagc gagatcccgg
      181 cgcggctcat ggaaatgacg ttggtcggcg taggcgcggg agcgctgatg ctcgtcttct
      241 cgcgacccat ccggaattgg atgggcggcg ttcgctagcg agcggatgag cgcccaaccg
      301 ctgccgccgc agctcaccgc tcgcgcgatc atcctcgccg tcgtgctcgc gatgatcctc
      361 gcggccgcga acacctacct cggcctcttc gcgggaatga cgatcgcatc cgcgatcccg
      421 gctgcagtgg tttcgatggc ggtgctgcgc gtgctcggcg gcggcgggat tctcgagaac
      481 aacatcgtgc aaaccggcgg ctctgccggg gcttcgctcg cctcgggcgt gatcttcacg
      541 attcccgcgc tcgtgatctt gggcttctgg gacgacttcg acttcctatg ggtcgtcgcg
      601 atcgcggcac tcggcgggct cctcggcgtg ttgttctcgg tgccgctgcg ccgctcgttg
      661 atcgtcgatc aaaaactcgc gttcccggaa ggtaaggccg cggccgaggt gctgcgaacg
      721 ggcgagaacc cggcgcaagg cgtcaagatc ctcgggggcg cggcgctcgg cggcgggctc
      781 gtgaagctcg cggcggctag cggcctcggc ctgatcccgg acacagcggc agtggcagcc
      841 tatgccggca ggagcatcgc gtacttcggc acgaaccttt cgccggcgtt gctcgcggtc
      901 ggctatatcg tcgggctgaa catcggcacc gtcgtgctct tgggcggcgt gatctcctgg
      961 aacatcgcga tcccgctgta tgccgcgttc gggctcgacg ggaatccgga tctcgcgagc
     1021 accgtggcgg ggctcccggc cgaagatgcg gcgaacgttc tctggagtcg gcaaatccgt
     1081 tacctcggcg tcggcgcgat gctggtcggc gggctctggg ccctgttcag tctgcgcaaa
     1141 tcgttgctct ccggcgtcaa gagcggtctt gccgcggcgc gagccggctc gcaaacggcg
     1201 atcgcgcaca cggaacgcga cttgcccatg cagggagtgc tgatcggtat cgtgctgttc
     1261 gcgctgccgc tgctcgtgct ctaccagaat atcgtcggct cgttcgcggt cagcgtgcca
     1321 atgacgatca tcatgatcgt cgccggattc ctgttctgct cggtctccgc atacatggcc
     1381 ggcctcgtcg ggacgtcgaa caaccccgtg tccggcatga cgatcggcac gatcctgttc
     1441 tcggcggtcg tgctgctcgt gttgatgggg ccgggctctg ccaccggccc ggtcgccgca
     1501 atcatgatcg gcgccgtcgt ctgctgcgcg gcgtgcatcg ccggcgacaa cctccaggac
     1561 ctgaagtgcg gctacatcgt cggcgcgacc ccgtggcgtc aacaggtcat gctcgcgatc
     1621 ggcgcattcg cgagcgcgct cgtgatggcg ccggtcctga accttctcgc gcgcgcctat
     1681 ggcatcggta taccgaccga ggcgcatccg gacccgctga tcgctccgca ggcgacgttg
     1741 atggcgtcgg tggcacgagg actgttcggc ggctcgttac cttggccgac cattgccgtc
     1801 ggtgcgggca tcggcgccgc gatcatcgcc ctcgacgagt ggctcaaggc gaagggtgcg
     1861 aagttccgca cgccggtgct cgctgcggcg gtcggcattt acctgccgct cgagctctcc
     1921 gtgccgattt tcttgggcgg tctgctcgct tggttctgcg agcgcacgct caaggcgagg
     1981 gatcccggcg caaccgtcga gcatgtcgag cgaatcgcac gcaagggcat gctgttcgca
     2041 gcgggcatga tcacgggcga ggctttgatg ggcatcgtga tcgcaattcc gatcgtcgtt
     2101 tacagtcgcg ccgacgtgct cgcgctgccg gccaatttgc gcatcggctc gtcggccgtc
     2161 ggcgaatggc tcgggctcgc ggtgctcgcg ctgctcgcgt
//
LOCUS       DATCUD010000068         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7762, whole genome shotgun sequence.
ACCESSION   DATCUD010000068 DATCUD010000000
VERSION     DATCUD010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7762"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="VIQ99_00995"
     CDS             complement(<1..1029)
                     /locus_tag="VIQ99_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9181741.1"
                     /translation="MLKESTVLRHSHEIEASSQLKNVRYEIRGKLARRAHELERQGYE
                     ITQLNIGNPGLFGLRTPETMRLAMIENLPSAEAYCNQKGIFPAREAVVMQQQARGIEG
                     VDADHVFMGNGVSELIDLTLRGLLNPGDEVLIPSPDYPLWTAATVLNGGRAVYYPCPE
                     SQGFNPDPDAIEKLITPRTRAIVIINPNNPTGAVYSRERLTAIARLAERHNLVVMSDE
                     IYDQMLYDGAEFVPMATLARDTLCATFSGLSKIYRACGYRVGWVSFSGAVDRSEKYMS
                     ALDLLAALRLCSNVPGQWAVQTALGGFQSIHKLCSPGGRLYQSRQAIIDGVKRSRFLN
                     LVAPRGAMY"
     gene            complement(1116..>1515)
                     /locus_tag="VIQ99_01000"
     CDS             complement(1116..>1515)
                     /locus_tag="VIQ99_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007184549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY9181742.1"
                     /translation="QDGAVATSEVAAAQAAGDLLVDARAAPRYRGEQEPIDPKAGHVP
                     GALNRPFSANVTPAGRFRPPAELRAELTELLGGRSPDRLIAMCGSGVTAAHLLLAMEV
                     AGLPGGRLYAGSWSEWIRDPARPIRTGAEP"
BASE COUNT          246 a          499 c          504 g          266 t
ORIGIN      
        1 gtacatcgcg ccgcgcggtg cgacgagatt caagaagcga ctccgcttca caccgtcgat
       61 gatcgcttgc cgcgattgat acagcctacc gcccggcgag cagagcttgt gaatgctctg
      121 aaagccgccg agcgcggttt gcactgccca ctggcccgga acgttgctgc acagacgcaa
      181 tgcggccaac agatcgagcg cgctcatgta tttctccgag cggtcgacgg cgccgctgaa
      241 tgacacccag ccgacgcgat aaccgcacgc gcgatagatc ttcgacaagc cgctgaacgt
      301 cgcgcagagc gtgtcgcggg cgagcgttgc catcggcacg aattcggcgc cgtcgtacaa
      361 catctggtcg tagatctcgt cgctcatgac gacgaggttg tgccgttccg caagccgcgc
      421 gatcgccgta agccgctcgc ggctgtagac ggcgccggtc gggttgttcg gattgatgat
      481 gacgatcgcg cgcgtgcgcg gcgtgatcaa cttttcgatt gcgtcggggt cgggattgaa
      541 cccttgcgac tccgggcacg ggtagtagac ggcgcggccg ccgttcaaca ccgtagccgc
      601 ggtccagagc ggatagtccg ggctcgggat caagacttcg tcgccggggt tcaagaggcc
      661 gcgcagcgtg aggtcgatga gctcgctgac gccgttgccc atgaacacgt ggtcggcgtc
      721 gacgccctcg atgccgcgtg cttgctgctg catcacgacg gcttcgcgcg ccggaaagat
      781 gcctttctgg ttgcagtagg cctcggccga cggcaggttc tcgatcatcg cgaggcgcat
      841 cgtctcgggc gtgcggaggc caaacaggcc cggattgccg atgttcagct gcgtgatctc
      901 gtagccttgc cgctcgagct cgtgggcgcg ccgggccagc ttgccgcgta tttcatagcg
      961 gacattcttg agctgggagc tcgcttcgat ctcatgagag tggcgcaaca cggtcgattc
     1021 cttcagcaaa acgcttggat gcagggagtg tctttaccat gctccgccgc tcgggccaag
     1081 cgcctgcgta gcagtcggag caaagaagcg ccttcttacg gctcagcccc ggtgcggatc
     1141 gggcgggccg gatcgcggat ccattcgctc cacgaccccg catagaggcg gccgcccggc
     1201 agccccgcca cctccatcgc gagcagcaaa tgagcggccg tgacaccgga gccgcacatc
     1261 gcgatgagcc ggtcgggact gcggccgccg aggagctcgg tgagctcggc gcgcagctca
     1321 gccggcggcc ggaaccgccc cgccggcgtc acgttcgccg agaacggccg attcagcgcc
     1381 cccggcacgt gcccggcctt cgggtcgatc ggttcttgct caccgcgata acgcggcgcg
     1441 gcacgtgcgt cgacgagcag gtcgccggcc gcttgcgccg ccgcgacttc gctcgttgcc
     1501 acggcgccgt cttgt
//
LOCUS       DATCUD010000069         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_57455, whole genome shotgun sequence.
ACCESSION   DATCUD010000069 DATCUD010000000
VERSION     DATCUD010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57455"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1599
                     /locus_tag="VIQ99_01005"
     CDS             <1..>1599
                     /locus_tag="VIQ99_01005"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9181743.1"
                     /translation="AFLRDSIGRVFAELAVTIAAAVIFSSVLALSLSPMMCSKLLRSS
                     VKESKLTHTLDNAFVWLSNRYQAVLRTTLRAPWVSVAACAGIAFAAYVLLQNIPQEYA
                     PVEDRGQFNGQIQAPEGASYERLRQSALRVEEALQPYFADGSIQRGVISVPGWGNNGS
                     GIVNVTLKPWGERKIGTQDMLNDLNKKWEEIPDVRVNAFVSSGNRGGGGGGGGGSPVQ
                     IVIGGPNYEELARWRDIIIARASEENPRLIRLDSDLRETQPQVLVRVDSDRAASLGVT
                     ARSIGSTLQTLMSERQVTTYVVDGEEYDVVLQAKPEQRASYSDLSNIFVRAERGGGLI
                     PLSNLTKLEDMAGPSQLQRHNRMRAVTLSANLAPGYTLGEALTYLENIIRTELPDTAQ
                     IDYRGESLEYKEASGALYFTFGIALFVVFLVLAAQFESFIHPLVIMVTVPLAVAGGLL
                     GLWMSGKTLNIYSQIGIIMLVGIAAKNGVLIVEFINQLRDQGLEFKEAIVEASRIRLR
                     PVIMTAFAAVMGAVPLIFAEGPGSA"
BASE COUNT          277 a          512 c          533 g          277 t
ORIGIN      
        1 gcgttcttgc gcgacagcat cgggcgcgtg ttcgcggagc tcgccgtgac gatcgcggcc
       61 gccgtgatct tctcgtccgt gctcgcgctg tcgctgtcgc cgatgatgtg ctcgaagctg
      121 ctgcgctcga gcgtcaagga aagcaagctc acgcacacgc tcgacaacgc gttcgtatgg
      181 ttgtcgaacc gttaccaagc cgtgcttcgc acgacgctgc gcgcgccgtg ggtgtcggtg
      241 gccgcgtgcg ccggcatcgc gttcgccgcg tacgtgctgc tccagaacat cccgcaggag
      301 tacgcgcccg tcgaggatcg cggccagttc aacggccaga tccaagcgcc ggagggcgcg
      361 agctacgagc gtctgcgtca gtcggccctg agggtcgaag aagcgctcca gccatacttc
      421 gccgacggca gcattcagcg cggcgtgatc agcgtcccgg gctggggcaa caacggctcc
      481 ggcatcgtga acgtcacgtt gaagccctgg ggcgaacgca agatcggcac ccaggacatg
      541 ctgaacgatc tgaacaagaa gtgggaagag atccccgacg tccgcgtcaa cgcgttcgtc
      601 agcagcggca atcgtggcgg cgggggcggt gggggcggcg gcagccccgt gcagatcgtg
      661 atcggcggcc cgaactacga ggagctcgcg cgctggcgcg acatcatcat cgcacgtgcg
      721 tcggaggaaa atccgcgcct gatccggctc gattccgact tgcgcgagac gcagccacaa
      781 gtgctcgtgc gcgtcgattc ggaccgtgcc gcgagcctcg gcgtgacggc gcgcagcatc
      841 ggctcgacgc tgcaaacgct gatgagcgag cgccaggtga ccacgtacgt cgtcgacggc
      901 gaggagtacg acgtcgtgct ccaagccaag cccgagcagc gcgcgtcgta ctcggatttg
      961 agcaacatct tcgtgcgtgc cgaacgcggc ggcggactga tcccgctctc gaatctgacg
     1021 aagctcgagg atatggccgg cccgagccag ctacagcgac acaaccgcat gcgcgccgta
     1081 acgctgtccg cgaacctcgc gccgggctac acgctcggcg aggcgctcac ctacctcgag
     1141 aacatcattc gcaccgagct gccggatacg gcgcagatcg actaccgcgg cgagtcgctc
     1201 gagtacaagg aagcgtccgg cgctctgtac ttcacgttcg gcattgcgtt gttcgtcgtg
     1261 ttcctcgtgc tcgcggcgca attcgagagc ttcatccatc cgctcgtgat catggtgacg
     1321 gtcccgctcg ccgttgcagg cgggttgctc gggctgtgga tgtcgggcaa gacgctgaac
     1381 atctacagcc agatcggcat catcatgctc gtcggcatcg cggcgaagaa cggcgtgttg
     1441 atcgtcgagt tcatcaatca gctgcgtgac caaggtctgg agttcaagga agccatcgtc
     1501 gaggcgtcgc ggattcgctt gcggcccgtg atcatgactg cgttcgcggc cgtcatgggc
     1561 gccgtgccgt tgatcttcgc cgaaggcccg ggctcggcg
//
LOCUS       DATCUD010000070         2018 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36236, whole genome shotgun sequence.
ACCESSION   DATCUD010000070 DATCUD010000000
VERSION     DATCUD010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36236"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIQ99_01010"
     CDS             complement(<1..456)
                     /locus_tag="VIQ99_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9181744.1"
                     /translation="MTPEAVAAATPLAHRLRPGSFEDFLGHDKLLGPGKPLRQAIEQG
                     AVTSMVLWGPPGCGKTTLARLVARYTDKEFVTFSAVTEGVPRVREIIRSAEQRRQVEG
                     RGTILFCDEIHRFNRAQQDAFLPSVETGVITLIGATTENPSFELNSALLS"
     gene            632..>2018
                     /locus_tag="VIQ99_01015"
     CDS             632..>2018
                     /locus_tag="VIQ99_01015"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008294951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9181745.1"
                     /translation="MALAAAAAVCIAANGAAQEQRETRRPALHGKHWVAITGKPLAAT
                     AGALTFSRGGNAVDAACAMLAAAATMWDTLSWGGETQALIFDPRSGAVRAINALGVAP
                     TGATPEYFRSRGLRGPPEYGPLAAVTPGTPGGLLVMLAEFGTLSLEEVLEPAMQMAAG
                     YPMEQTQAANIEANKELLVRWEASRRVLLPNLDLKRPQGWAAPVPGQIFEQPELLATL
                     TKLVEAEREALAAGKGRKAAILAAYERFYRGDIARELVAATQAAGGLITLEDLDRWQV
                     YVEEPAVTNYKGIDVYKLNHWVQGPVMLQTLNLLENVDLHAMGYNSARYIHALYQAMN
                     LAYADRDFYYGDPYVPPVEPIKGLLSKEYARQRFALIDWERNSPLVRPGDPYPFQGGT
                     NPYLDLIEHWRPRIAQQARAAVGDEPTLTHDERFLVGTTSIQAADAQGWVVSVTPSGG
                     WVPAFIAGNTGV"
BASE COUNT          338 a          657 c          709 g          314 t
ORIGIN      
        1 cgacaacaat gccgaattca actcgaacga agggttctcg gtggtcgcgc cgatcagcgt
       61 gatgacgccg gtctcgacgg acggcagaaa ggcgtcttgc tgcgcgcgat tgaatcgatg
      121 gatctcgtcg cagaacagga tcgtgccgcg gccctcgacc tggcggcgct gctcggcgga
      181 tcggatgatc tcgcgcacgc gcggcacgcc ttcggtcacg gcgctgaacg tcacgaattc
      241 cttgtcggtg tagcgcgcca cgagccgcgc gagcgtcgtc ttgccgcagc cgggcggacc
      301 ccagagcacc atgctcgtga cggctccttg ctcgatcgct tgccgcagcg gcttgccggg
      361 tccgagcagc ttgtcgtgcc cgagaaagtc ttcgaacgag cccggtcgca gccggtgcgc
      421 gagcggcgtc gcagcggcga cggcctccgg cgtcatggcc tccgggaaca gcgcgagctc
      481 gtcggtcaag gcttcgggac ctccgggacc cattctactg gtcagccgcc gcgtgatgcg
      541 cgcccactgg cggaacccaa cccggtgata cactcgggcc atgagcgcaa gacgcaggga
      601 tcggcatcac ggttggccgc gtcgctgggc gatggccctg gcggccgcgg cggcggtgtg
      661 cattgcggca aacggggcag cgcaagagca gcgcgaaacc cgccggccgg ccttgcacgg
      721 caagcactgg gtcgcaatca cgggcaagcc gctggccgcg acggccggcg cactgacgtt
      781 ctcgcgcggt ggcaacgccg tcgatgccgc gtgcgcgatg ctcgcagccg cggccacgat
      841 gtgggacacg ttgagctggg gcggagaaac gcaggcgctg atcttcgacc cgcgcagcgg
      901 cgccgtgcgc gcgatcaacg cgctcggtgt cgcgccgacc ggcgcaacac ccgagtactt
      961 ccgcagtcgc ggcctgcgcg ggcctccgga gtacggaccg ctcgccgccg tgacgccggg
     1021 tacgccgggc gggctgctcg tgatgctcgc ggaattcggc acgctgagcc tcgaagaggt
     1081 tctcgagcct gcgatgcaaa tggcggccgg ttatccgatg gagcagacgc aagccgccaa
     1141 catcgaagcg aacaaagagc tgctcgtgcg ttgggaagca tcgcggcgag tgctgttgcc
     1201 gaacttggac ctgaagcggc cgcaagggtg ggcggccccg gtgccgggcc aaatcttcga
     1261 gcagcccgag ctgcttgcga ccttgacgaa gctcgtcgag gccgagcgcg aagcgctcgc
     1321 ggcgggcaag ggtcgtaagg ccgcgattct ggcggcctac gagcggttct accgcggcga
     1381 catcgcgcgc gagctggttg ccgcaacgca agccgcgggc ggcttgatca cgctcgagga
     1441 tctcgatcgc tggcaggtct atgtcgagga gccggccgtc acgaattata aaggcatcga
     1501 cgtctacaag ctgaatcact gggtgcaagg gccggtgatg ctgcagacgt tgaacctgct
     1561 cgagaacgtg gacctgcatg cgatgggcta caacagcgcc cggtacatac acgcgctgta
     1621 tcaggccatg aacttggcct acgccgatcg cgacttctac tacggcgatc cctacgtgcc
     1681 gccggtcgag ccgatcaagg gcctgttgtc gaaggagtac gctcggcagc ggttcgcgct
     1741 gatcgattgg gagcgcaaca gcccgctcgt gcgtcccggc gatccgtacc cgtttcaggg
     1801 cggcacgaat ccgtatctcg acttaatcga gcactggcgc ccgcggattg ctcagcaggc
     1861 acgcgcggcc gtgggggacg agcccacgct cacgcacgac gagcggttcc tggtcggcac
     1921 gacgtcgatc caggcggccg atgcgcaggg ctgggtcgtc tccgtcacgc cgagcggcgg
     1981 ttgggtaccc gcgttcatcg ccggtaacac cggggtcg
//
LOCUS       DATCUD010000071         3569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43285, whole genome shotgun sequence.
ACCESSION   DATCUD010000071 DATCUD010000000
VERSION     DATCUD010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3569
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43285"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            300..866
                     /gene="efp"
                     /locus_tag="VIQ99_01020"
     CDS             300..866
                     /gene="efp"
                     /locus_tag="VIQ99_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011814765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEY9181746.1"
                     /translation="MAVYSTNEFKSGMKILLDGDPYAILENEYVKPGKGQAFNRVKVR
                     NLKTGRVTERTFKSGDTAEAADVVDQDMQYLYTDGQFWYFMVPDTFEQVTAGEAAVAD
                     AKDWMKEQETCIVTLWDGVPLYVAPPNQVDLKIVETDPGVRGDTATGGQKPAKLETGA
                     VVRVPLFINEGEVIRVDTRSRTYVSRAK"
     gene            complement(876..1844)
                     /gene="epmA"
                     /locus_tag="VIQ99_01025"
     CDS             complement(876..1844)
                     /gene="epmA"
                     /locus_tag="VIQ99_01025"
                     /inference="COORDINATES: protein motif:HMM:NF006828.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HEY9181747.1"
                     /translation="MPYTLSASLPTLRQRAAMLASVRAFFAQRGVLEVETPALSSAGV
                     TDPAIESVTATVMRLGSAPHYLQTSPEFAMKRLLAAGSGDIYQLCRVFRDDELGRWHQ
                     PEFTMLEWYRVGWDEQKLMTEVEELVGAALAAAAPGTAVRSVRVRYADALHAVLGVHP
                     DAATAELARRLAVQGIDVPGGLGHDALLDLAFATRVVASFDPAALTFVYDYPPSQAAL
                     ARLKPGPPAVAARFELFSGGIELANGFHELTDPREQRRRFEAERARRVREGHRAPPLD
                     EAFLAALEAGLPDCAGVALGVDRLVALATNQTGVASAMSFAHGDGG"
     gene            complement(1849..2697)
                     /gene="asd"
                     /locus_tag="VIQ99_01030"
     CDS             complement(1849..2697)
                     /gene="asd"
                     /locus_tag="VIQ99_01030"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00163.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HEY9181748.1"
                     /translation="MTSPTWVWLTQHLLPKNAMSAIVYRATRSRRAWLRRPLVHWFAR
                     AYRVDLAEAANPDLDSYATFNEFFTRELAVGARAIETGPGLLVAPSDGVLTEHGAIDG
                     DRLFQAKGQAYSLTELLGETTDEVAALRGGTYFTIYLAPHNYHRVHAPLTGHLTRTRY
                     VPGTRFSVSRATAAAIPRLFCRNERAICWFDTERGPVVVVFVGALNVSSISTFTRGEI
                     ASGAPREWHEDPPRRVDAGAEIGRFNMGSTIVVLLGTRAFEFAASIENGAAVRMGQAI
                     GAFTRS"
     gene            complement(2694..3329)
                     /locus_tag="VIQ99_01035"
     CDS             complement(2694..3329)
                     /locus_tag="VIQ99_01035"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY9181749.1"
                     /translation="MLGGMLRIVVVALVVLVAAMFLLPRGERGAPPQTATVLPAPREL
                     ADVSLVDETGQPIRFSDFEGGFSLLFFGFTNCPDICPLTLQVLAATRAEIVARAPNLA
                     PRVVFVSVDPNRDTPERIATYLDNFDPEFLGVTAPDDALAPLLAALGVAVEKHEHGGA
                     NYNVVHNSAIYLLDPNADWIAVTTAPHDPKIIASDYLRIRRRHQGGTPPDA"
     gene            3368..>3569
                     /locus_tag="VIQ99_01040"
     CDS             3368..>3569
                     /locus_tag="VIQ99_01040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181750.1"
                     /translation="MDLTELSERLRAAPNCGAWIAAVAAFFDDHGLCFGHGTDNASDE
                     AYWLLRHLTAWAEVDWNAPPTPA"
BASE COUNT          611 a         1174 c         1235 g          549 t
ORIGIN      
        1 tccgcatccg cgcgatgaag ccgtgcggca cgagcaacga gaatggcgtc gagggcgccg
       61 cagcgagagc ggctgccgga aggtcgagaa gccgcagcaa ttcggcgggg tcgcggaccg
      121 cgctgcggac cgcttcctgc cacgacgggc gaacgagcgg ttccgcggcg gcgtccgccg
      181 cggcgatgtc gggcgcgccg cttcgtgtcg gattgatcgg gaggtcctct tcgtggttcg
      241 tgttccgccg agcttgagag tatgatcccg cgctcggttt tcaggcagac ggcaatcgca
      301 tggcagttta cagcaccaac gaattcaaga gcggaatgaa gatcctgctc gacggcgacc
      361 cctacgcgat cctcgagaac gaatacgtga agccgggcaa gggccaggca ttcaatcgcg
      421 tgaaggtccg caacctgaaa acgggccgcg tcaccgagcg cacgttcaag tccggcgata
      481 cggccgaggc cgccgacgtc gtcgatcaag acatgcagta cctgtatacc gacgggcagt
      541 tctggtactt catggtgccg gacacgttcg agcaagtgac cgccggcgag gccgccgtcg
      601 ccgacgcgaa ggattggatg aaggagcagg agacctgcat cgtcacgtta tgggacggcg
      661 tgccgctcta cgtcgcaccg ccgaaccagg tcgatctcaa gatcgtcgag accgatcccg
      721 gcgttcgcgg tgataccgcc acgggcggcc agaagcccgc gaagctcgag acgggcgccg
      781 tggtgcgcgt cccgttgttc atcaatgaag gcgaagtgat ccgcgtcgat acgcgttcgc
      841 gcacgtacgt ctcgcgcgcc aagtaatccc gctcttcagc cgccgtcgcc gtgggcgaag
      901 ctcatggccg aggccacgcc ggtctggttc gtcgcgagcg cgacgaggcg atcgacgccg
      961 agcgcgacgc cggcacagtc cggtaggccg gcctcgagcg ccgcgagaaa cgcttcgtcg
     1021 agcggcggcg cccggtgtcc ctcgcgcacc cgccgtgcgc gctccgcttc gaaccgccgc
     1081 cgctgctcgc ggggatccgt gagctcgtga aagccgttgg cgagctcgat gccgccgctg
     1141 aacagctcga atcgtgctgc aaccgccggc ggtcccggct tcagccgcgc caacgcggct
     1201 tggctcggcg gatagtcata gacgaacgtg agcgccgcag ggtcgaagct cgcgacgacg
     1261 cgcgtggcga acgcgaggtc gagcagtgcg tcgtgtccga ggccgccggg cacgtcgatg
     1321 ccttgcaccg cgagtcgtcg tgcgagctcc gcagtcgcgg catccggatg caccccgagg
     1381 accgcgtgca gcgcgtcggc gtagcgtacc cgcacgctgc ggaccgcggt gcccggcgcg
     1441 gcggctgcga gcgctgcgcc gacgagctcc tcgacctcgg tcatgagctt ctgctcgtcc
     1501 cagccgactc gataccactc cagcatcgtg aactcgggtt ggtgccaacg cccgagctcg
     1561 tcgtcgcgga acacgcggca cagctgatag atgtcgccgc tgccggccgc gagcaaccgc
     1621 ttcatcgcga actcgggcga cgtctgaaga tagtgcggcg ccgagccgag tcgcatcacg
     1681 gtggccgtga cgctctcgat cgccggatcc gtgacgccgg ccgaagagag cgcgggcgtc
     1741 tcgacctcga ggacgccgcg ctgtgcgaaa aacgcgcgga ccgaggccag catagcggcc
     1801 cgttgccgca gcgttggtag ggacgcggac agcgtgtacg gcatcggatc aagaccgcgt
     1861 gaacgcgccg atcgcttgac ccatccgtac ggcggcgccg ttctcgatcg acgccgcaaa
     1921 ctcgaacgcg cgcgtgccga gcagcacgac gatcgtcgag cccatgttga agcgcccgat
     1981 ctcggcgccg gcgtcgacgc ggcgcggcgg gtcctcgtgc cactcgcgcg gcgcaccgct
     2041 cgcgatttcg ccgcgcgtga acgtgctgat gctcgagacg ttcagcgcgc cgacgaacac
     2101 cacgacgacg ggaccacgct cggtatcgaa ccagcagatc gcgcgctcgt tgcggcaaaa
     2161 cagtcgcggg atcgcggcgg ccgtcgcgcg gctgacgctg aagcgagtgc cgggcacgta
     2221 acgcgtccga gtcaggtgtc cggtcagcgg tgcgtgcacg cggtgataat tgtgcggcgc
     2281 cagatagatc gtgaagtacg tgccgccgcg gagcgcggcg acctcgtctg tcgtctcgcc
     2341 gagcagctcc gtgagcgagt aagcctgccc ttttgcctga aacaggcgat caccgtcgat
     2401 cgctccgtgc tcggtgagca cgccatcgga aggcgcaacg agcaagcccg gacctgtctc
     2461 gatcgcgcgc gcgccgaccg cgagctcccg cgtgaagaac tcgttgaacg tcgcgtagct
     2521 gtcgaggtcg gggttcgcgg cctccgcgag gtctacacga taggctcttg cgaaccaatg
     2581 cacgagcggg cgcctcaacc acgctcgccg cgagcgcgtc gcgcggtaca cgattgcgga
     2641 catggcgttc ttcggtaaca ggtgctgcgt gagccacacc caggtcgggg aggtcatgcg
     2701 tcgggaggcg tgccgccctg atgccgtcga cggatcctca ggtaatcgga ggcgatgatc
     2761 ttggggtcgt gcggagccgt cgtcacggcg atccaatcgg cattcgggtc gagcagatag
     2821 atcgccgagt tgtgcacgac gttgtagttc gctccgccgt gctcgtgctt ctccacggcg
     2881 acgccgagcg ccgccagcaa cggtgcgagc gcatcgtcgg gtgccgtgac gcccaagaac
     2941 tcgggatcga agttgtcgag ataggtggcg atgcgctccg gcgtatcgcg gttcggatcg
     3001 acgctgacga acacgacgcg cggcgcgagg ttcggagccc gggcgacgat ctcggcccgc
     3061 gtggccgcca agacctgcaa cgtcagtgga cagatgtcgg ggcaattcgt gaagccgaag
     3121 aacagcaacg agaagccgcc ttcgaagtcg ctgaagcgga tcggttgccc ggtctcgtcg
     3181 acgaggctca cgtccgcgag ctcgcgcggg gcgggcagga cggtcgcggt ctgaggcggc
     3241 gcgccgcgct cgccgcgcgg caataggaac atcgccgcga cgagcacgac caacgcgacg
     3301 acgacgattc gcagcattcc gcccagcacg tcgcgattat cgcacagaga gttatcatgc
     3361 gcgccgcatg gacctgaccg agctttcgga acgattgcgt gcggcgccga attgcggcgc
     3421 ttggattgct gcggtcgccg cgttcttcga tgaccacggc ctctgcttcg gccatggcac
     3481 cgacaatgcg agcgacgaag cgtattggtt gttgcgtcac ctcacggctt gggccgaggt
     3541 cgactggaac gccccgccca cgcccgcca
//
LOCUS       DATCUD010000072         1904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_29129, whole genome shotgun sequence.
ACCESSION   DATCUD010000072 DATCUD010000000
VERSION     DATCUD010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29129"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1549
                     /locus_tag="VIQ99_01045"
     CDS             <1..1549
                     /locus_tag="VIQ99_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HEY9181751.1"
                     /translation="LTMNFLVNASPLAGREGRFVTSKAFQHGFTPLVVINKIDREGAR
                     ADWVLDRTFDLFDRLGASDKQLDFPVIYASALKGYASKDPAARDGDMQPLFEAIINNV
                     PPPRVELDGPLQLQVSSLDYNSYVGLMGIGRINRGVVKRNMPVTLVQRDGTERNAQLM
                     ELYGFEGLTRVPVPEAGAGDIVVFSGIEGLQISDTVCARGQAEGLPPLQVDEPTITMT
                     FQVNKSPFAGQEGKYLTSRQIRARLDQELQHNVALRVEDTDDADKFRVSGRGELHLSV
                     LIENMRREGYELAVSRPAVIERVVDGVVEEPWEQLTVDFGEQYQGSVMTRLAERKGEL
                     VSMMPDGRGRVRLEYRIPARGLIGFRTEYLTATAGTGLLYHIFDGYAPRAKGEIGQRI
                     NGALVSMVQGKAVAYTLFALQERGSLFIGHGVEVYEGMIIGIHSRDNDLMVNPTKGKK
                     LTNIRAAGSDENIILTPPIKFSLEQALEFIDDDELVEVTPTSVRLRKKLLTENERKRE
                     SRKAAEG"
     gene            1676..>1904
                     /locus_tag="VIQ99_01050"
     CDS             1676..>1904
                     /locus_tag="VIQ99_01050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181752.1"
                     /translation="MAISIACAALAAVRAAHAQLTGPRPISEEQEKAALGLPEWRQAL
                     GPLDGTWEGTVAVVDATDKTPPGFWQPGNRPE"
BASE COUNT          350 a          628 c          638 g          288 t
ORIGIN      
        1 gctcaccatg aacttcctgg tgaatgcctc tccgctcgcc gggcgcgagg gccgcttcgt
       61 cacgagcaaa gcgttccagc acggcttcac gccgctcgtc gtgatcaaca aaatcgatcg
      121 cgaaggcgcc agagcggact gggtgctcga caggacattc gatctcttcg accggctcgg
      181 cgcgagcgac aagcagctcg attttcccgt gatctacgcg tccgccctga aaggctatgc
      241 gtcgaaggac ccggcggcgc gcgacggcga catgcagccg ctgttcgaag ccatcatcaa
      301 caacgtgccg ccgccacgcg tagagctcga cggcccgctt cagctgcagg tgtcgagtct
      361 cgactacaac tcttacgtag gcctcatggg cattggccgt atcaaccgcg gcgtcgtgaa
      421 acgcaacatg cccgtgacgc tcgtgcagcg cgacggcacg gagcgcaacg ctcagctcat
      481 ggagctgtat ggcttcgagg gcctgacgcg cgtccccgtg ccggaggccg gagccggcga
      541 catcgtggtc ttcagcggca tcgagggcct gcagatctcc gacacggtct gcgcgcgcgg
      601 ccaagccgaa ggcctgccgc cgctgcaagt cgacgagcct acgatcacga tgacgttcca
      661 agtgaacaag tcgccgttcg cgggccaaga gggcaagtac ctcacgagcc ggcagattcg
      721 cgcacggctc gatcaggagc tacagcacaa cgtcgcgctg cgcgtcgagg acacggacga
      781 cgccgacaaa ttccgcgtgt cgggccgcgg cgagctgcac ctatcggtgc tgatcgagaa
      841 catgcgccgc gaaggctacg agctcgccgt gtcgcggccg gccgtgatcg agcgcgtcgt
      901 cgacggcgtc gtcgaagagc cgtgggagca gctcacggtc gacttcggcg aacagtatca
      961 gggcagcgtg atgacgcgcc tcgccgagcg caagggtgag ctcgtctcga tgatgccgga
     1021 cggccgcggc cgcgtgcggc tcgagtatcg gatcccggcg cgaggcctga tcggtttccg
     1081 caccgaatac ctgactgcga ccgcgggcac gggcttgctg tatcacatct tcgacggcta
     1141 cgcgccgcgc gcgaagggcg agatcggcca gcgcatcaac ggcgcgctcg tctcgatggt
     1201 gcaaggcaag gcggtcgcct acaccttatt cgccctccaa gagcgcggct cgctattcat
     1261 cggccacggc gtcgaggtct acgaggggat gatcatcggc atccacagcc gcgacaacga
     1321 tctcatggtc aacccgacga agggcaagaa gctcacgaat atccgcgcgg ccggctccga
     1381 cgagaacatc atcttgacgc cgccgatcaa gttctcgctc gagcaggcgc tcgagttcat
     1441 cgacgacgac gagctcgtcg aggtcacccc gaccagcgtt cggctgcgca agaagctgct
     1501 gaccgagaac gagcgcaagc gcgaatcgcg caaggctgcg gaaggctaga ccgcggcgcc
     1561 cgcagaccgg gcgggtgccg cttgagcgcg cctggcgttt ccgtctagag tcgatccgat
     1621 cagggcatct gcggggggcg cgcagttgcg ttcacgtgtt cgggtccgag gcgtcgtggc
     1681 catatccata gcgtgtgcgg cgctcgcggc cgtgcgtgcc gcgcacgcac agctcacggg
     1741 gccgcggccc atcagcgagg aacaggagaa ggccgcgctc ggcttgccgg aatggcgaca
     1801 ggcgctcggg cccctcgacg gaacctggga aggcacggtc gcggtcgtcg acgccacgga
     1861 caagacgccg ccggggttct ggcaaccggg caatcgcccg gagc
//
LOCUS       DATCUD010000073         3118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_29130, whole genome shotgun sequence.
ACCESSION   DATCUD010000073 DATCUD010000000
VERSION     DATCUD010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29130"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /gene="glnA"
                     /locus_tag="VIQ99_01055"
     CDS             <1..754
                     /gene="glnA"
                     /locus_tag="VIQ99_01055"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960935.1"
                     /note="forms a homododecamer; forms glutamine from ammonia
                     and glutamate with the conversion of ATP to ADP and
                     phosphate; also functions in the assimilation of ammonia;
                     highly regulated protein controlled by the
                     addition/removal of adenylyl groups by adenylyltransferase
                     from specific tyrosine residues; addition of adenylyl
                     groups results in inactivation of the enzyme; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HEY9181753.1"
                     /translation="CEIGVKFGPLVKKADDVMILKYVVHNVAHSFGKTATFMPKPLVG
                     DNGSGMHVHQSLAKGGKNLFTGDLYGGLSQTALYYIGGIMKHAHAINALTNASTNSYK
                     RLVKGFEAPTLLAYSARNRSASIRVPYVQNPKARRIEVRFPDSTSNPYLGFTAMLMAG
                     LDGIANKINPGAPSDKDLYDLPPEEEKQIPTVSYSLMQSLEALDKDRGFLTAGGVLNN
                     ETIDAYIGLKEQEITRFSMTPHPVEFEMYYSL"
     gene            860..1378
                     /locus_tag="VIQ99_01060"
     CDS             860..1378
                     /locus_tag="VIQ99_01060"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEY9181754.1"
                     /translation="MRKWLILLFALSATTAASAPAWRWVDANGQVHFSDRPVPGAQQV
                     ELSGAQGFGTQVAQGAAPRGGATQPGDTPPPYRSIEVVSPADQEVLWNIGAQLTVQVQ
                     FQPALQPGHRYDLIYDGQPRNLTATTTRVVLPDVFRGTHTLQVVVTDSSGVVVQRSGA
                     RSFTVQQASVRN"
     gene            1429..2493
                     /gene="glnL"
                     /locus_tag="VIQ99_01065"
     CDS             1429..2493
                     /gene="glnL"
                     /locus_tag="VIQ99_01065"
                     /inference="COORDINATES: protein motif:HMM:NF008293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HEY9181755.1"
                     /translation="MRRSRRSPNAENILRGLSTAVVLLDDQLLVTYLNPAAESLFGIS
                     SRRTIGRALAEFINPAQELVSLCQRALATSLTFNLHEFVARVGERDVVVDCRVALLDD
                     EHCLVLEFLDTERDRRVRREAELVAQQRLSRRIIRQLAHEVKNPLGGLRGAAQLLERQ
                     LPNAEQKAYTRVIIEEADRLAALVDGILRAGGAPRPEEINLHRIIEHVAQLIEAEKPS
                     TIELLRDYDPSLPAVTVDRNQMIQAFLNVARNAMQALGDRGRLIFRTRALTNFTVGGE
                     RHRLVLSAEVEDNGPGIPEELKETIFYPLVTGRPTGTGLGLTIAQDLVSRNGGLIEFT
                     SEPGRTVFQIRLPVVNGGGH"
     gene            2493..>3118
                     /locus_tag="VIQ99_01070"
     CDS             2493..>3118
                     /locus_tag="VIQ99_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008927499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9181756.1"
                     /translation="MATPGLSVWVVDDDESVRWVLEQALKQAHMFPRAFESGAEFFAA
                     LEQALKQAHMFPRAFETGEEFFGALQHGRPDVLITDIRMPDMSGLQLMERLTRTDPDL
                     PVIVITAHSDLDSAVSAYQGGAFEYLPKPFDIDEAIELVSRAARQRSRDDGEQPVVRP
                     TPRIIGQAPAMQEVFKAIGRLSRSSMTVLITGESGTGKELVARALHDNS"
BASE COUNT          578 a          999 c         1009 g          532 t
ORIGIN      
        1 gtgcgagatc ggcgtgaagt tcggcccgtt ggtcaagaaa gccgacgacg tcatgatctt
       61 gaagtacgtc gttcacaacg tcgcgcacag cttcggtaaa acggccacgt tcatgcccaa
      121 gccactcgtc ggcgacaacg gtagcggaat gcacgtccat cagtcgctcg cgaagggcgg
      181 caagaatctg ttcacgggcg atctatacgg cggcctctcg cagacggcgc tgtactacat
      241 cggcggcatc atgaagcatg cgcacgcgat caacgctctc acgaacgctt cgaccaacag
      301 ctacaagcgc ctcgtgaagg gcttcgaggc gcctactctg ctcgcgtact ccgcacgtaa
      361 tcgctccgcg tcgattcgag ttccgtacgt gcagaatccg aaagcgcgcc gcatcgaagt
      421 gcgtttcccg gacagcacgt cgaatccgta cctcgggttc accgccatgt tgatggcggg
      481 tctcgacggt atcgcgaaca agatcaaccc gggcgccccc agcgacaagg atctctatga
      541 tttaccgccc gaggaggaga agcagattcc gaccgtgtcg tactcgctga tgcaatcgct
      601 cgaggcgctg gacaaggatc gcggcttcct gaccgccggc ggggtgctga acaacgagac
      661 gatcgatgcg tacatcgggc tcaaggaaca ggagatcacg cggttctcga tgacgccgca
      721 cccggtcgag ttcgagatgt actacagcct ctaagttcga ggctggttag cgcgattctg
      781 tcaaacggca attgtggcgg ggttctcagg aaccccgccc agcctggcag aaagcgccgc
      841 ttggcgctaa gcttggagca tgcgtaagtg gctgatccta ttgttcgcgt tgtcggcgac
      901 taccgcggcc agcgcacccg cttggaggtg ggtcgacgcg aacggccaag tgcatttctc
      961 cgatcggccc gtgccgggag cccaacaagt ggagctcagc ggggcgcagg gcttcggcac
     1021 gcaggtcgcg cagggcgcgg cgccacgggg cggcgcgact cagcccggag acacgcctcc
     1081 tccataccgg agcatcgagg tcgtgagtcc cgcggaccaa gaggtgctgt ggaatatcgg
     1141 cgcccagctc accgttcaag ttcagttcca gccggcgttg cagcccggtc atcgttacga
     1201 cctgatctac gacggccaac cgcggaacct caccgcgacc acgacgcgcg tcgtcctgcc
     1261 cgacgtgttc cgcggcacgc acacgctgca agtggtggta acggacagct cgggcgttgt
     1321 cgtccagcgc tcgggagccc gcagcttcac cgttcaacaa gccagcgtgc ggaactaggc
     1381 gaacgcgcct ccgccgcaac gcgcggccaa tccgtttccc ccacgcagct gcggcgatcg
     1441 cggcgcagtc cgaacgcgga gaatattctc cgcggcctgt caacggccgt cgttctgctc
     1501 gacgaccagc tgctcgtgac gtacctgaac ccggcggccg aaagcctgtt cggtatcagc
     1561 tcgcgccgaa cgatcggccg cgcgctggcc gagttcatca atcccgctca ggaactcgtg
     1621 tctctgtgcc agcgcgcgct tgctacgagc ctcacgttca acctgcacga gttcgtggct
     1681 cgcgtaggcg agcgcgacgt ggtcgtggat tgccgcgtcg cattgctcga cgacgagcac
     1741 tgcctggtcc tcgagttcct ggacacggaa cgcgaccggc gcgtgcggcg cgaagcggag
     1801 ctggtcgcgc agcagcggct ctcgcgccgg atcattcgcc agcttgcgca tgaggtgaag
     1861 aacccgctcg gcgggttgcg cggcgctgcc cagctgctcg agaggcaact gcccaatgcg
     1921 gagcagaagg cgtacacgcg agtgatcatc gaggaggccg atcgtctcgc ggcgctcgtc
     1981 gacggcatcc tacgcgcggg cggtgctccg cggcccgaag aaatcaatct gcaccggatc
     2041 atcgagcacg ttgcgcagct gatcgaggcc gaaaagccct cgacgatcga gctccttcgc
     2101 gactacgacc cgagcttgcc ggcggtcacc gtcgaccgca atcaaatgat tcaggccttt
     2161 ctgaatgtgg cgcggaacgc gatgcaagcg cttggcgacc gcggccggct gatcttccgc
     2221 acgcgcgcgt tgacgaattt cacggtcggc ggcgaacggc atcgcttggt gctctccgcc
     2281 gaggtcgagg ataacggccc gggaattccg gaggagctca aggagacgat cttctaccca
     2341 ctcgtgacgg gacggccaac aggaacgggc cttggattga cgatcgcgca ggacctcgtg
     2401 agccgcaatg gcggcctgat cgagttcacg agcgaacccg gcaggacggt atttcagatc
     2461 aggctaccgg tcgtcaacgg agggggccac tgatggcaac tccgggtctc tccgtgtggg
     2521 tggtcgacga cgacgagtcc gtgcgctggg tgctggagca agcgctgaag caggcgcaca
     2581 tgttcccgcg cgcgttcgag tcgggcgccg agtttttcgc cgcgctcgag caagcgctga
     2641 agcaggcaca catgttcccg cgcgcgttcg agaccggcga agagttcttc ggcgcgttgc
     2701 agcacggccg gcctgatgtg ttgatcaccg acatccgcat gccggatatg agcgggctgc
     2761 agctcatgga gcggctcact cgaaccgatc ccgaccttcc ggtcatcgtg atcacggcgc
     2821 actcggatct cgatagcgcg gtgtccgcct atcagggcgg cgcgttcgag tatctgccga
     2881 agccgttcga catcgacgaa gccatcgagc tcgtgtcgcg cgccgcgcgc caacgcagtc
     2941 gcgacgatgg cgagcaaccc gtcgtgcggc ccacgccccg gatcatcggt caggcgccgg
     3001 cgatgcaaga ggtgttcaag gcgatcggcc gcttgtcgcg gtcgagcatg acggtgctga
     3061 tcacgggcga gtctggcacg ggcaaagagc tcgtggcgcg tgcgctgcac gacaactc
//
LOCUS       DATCUD010000074         1706 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43295, whole genome shotgun sequence.
ACCESSION   DATCUD010000074 DATCUD010000000
VERSION     DATCUD010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43295"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VIQ99_01075"
     CDS             <1..244
                     /locus_tag="VIQ99_01075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9181757.1"
                     /translation="LGCYCQVQRPEGMAPFHYTKILDRKCFDLGGIKMLYSSSFLNET
                     EFDALYNGAAYRALKAKYDPDGNAQTLYKKVAFAPR"
     gene            241..987
                     /locus_tag="VIQ99_01080"
     CDS             241..987
                     /locus_tag="VIQ99_01080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181758.1"
                     /translation="MTARPGTVVAALSIIAVTLATHPLRAQRPARMELPDDFAARTER
                     IGIAGFGGRNAGHYTLGELAGEFTRIESRFAIADPVYAQNRGRSSFTLAGPGFDGSVA
                     ASCEMRREAVTIGVITFDPEKMSYHCSFEGTAAPTPASFVLGEPEPENFRARMLALSA
                     RRGEATLGDITLAIRSVHRYAGSRLTAPMPVGYLIERDGRAVGGIELTDVEPMVLLPS
                     DETDAVRAAVLISALALAVLRDPATSALED"
     gene            complement(1020..1466)
                     /locus_tag="VIQ99_01085"
     CDS             complement(1020..1466)
                     /locus_tag="VIQ99_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010394684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY9181759.1"
                     /translation="MSEHRASIVWQRSSQDFTYQTYNRAHDWRFTAVTVPASATKEYR
                     GDESRVNPEEALVAALSSCHMLTFLAVAAKHKLSLDSYRDDAVGVLEKNAGGKLAITR
                     VILKPQIVWSAGVTVTAELLAKLHHDAHENCFIANSVHTEVTVEAA"
     gene            complement(1469..>1706)
                     /locus_tag="VIQ99_01090"
     CDS             complement(1469..>1706)
                     /locus_tag="VIQ99_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020876240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181760.1"
                     /translation="LNPDSLKIVSRAAIEPALGETLAEERVQFERLGYFVADRVLSKP
                     GAPVFNRTVTLRDSWAKIEQEALAAQPHGDESRD"
BASE COUNT          289 a          577 c          546 g          294 t
ORIGIN      
        1 cttgggctgc tattgccaag tgcagcgacc cgaaggcatg gcgcccttcc actacacgaa
       61 gatcctggac cgcaagtgct tcgatctcgg cggcatcaag atgctgtatt cgtcgtcgtt
      121 cctgaacgag accgagttcg acgcgctcta caatggcgcg gcctatcgag cgctcaaagc
      181 caagtacgat ccggacggta acgcccagac gttgtacaag aaagtggcct tcgcaccgcg
      241 atgaccgcac gcccaggaac cgtcgtcgcg gcgctgtcga tcatcgctgt caccctcgca
      301 acccatccgc tgcgtgcaca gcgcccggcg cgcatggaat tgcccgacga tttcgccgca
      361 cgcaccgagc gaatcggcat tgcggggttc ggcgggcgga acgcgggaca ctacacgctc
      421 ggcgagctcg cgggcgagtt cacgcgcatc gaatcgcgct tcgcgatcgc ggacccggtg
      481 tacgcgcaga accgcgggcg atcctcgttc acgctggcgg gccccggctt cgatggcagc
      541 gtggcggcaa gctgcgagat gcgccgcgag gccgtcacga tcggcgtaat cacgttcgac
      601 ccggagaaaa tgagctatca ctgctcgttc gaaggcaccg cggcgccgac gccggcatcg
      661 ttcgtgctcg gcgaacccga gcccgagaat tttcgggcgc ggatgctcgc actatccgct
      721 cgccgcggcg aagccacgct cggcgacatc acgctcgcga tccgctccgt ccaccgctac
      781 gccggcagca ggctcacggc cccgatgccc gttggttatc taatcgagcg cgacggacgc
      841 gcggtcggcg ggatcgagct cacggacgtc gagccaatgg tgttgttgcc gagcgacgaa
      901 acggacgccg tccgcgctgc ggtgctgatc tcggcgctcg cgctcgccgt gctccgcgat
      961 cccgcgacct cggctctcga agactagcgg ctggccatgc tcgcgcgcgg ttcgcgcgat
     1021 tacgcggctt cgacagtcac ctcggtgtgc acggaattcg cgatgaaaca gttctcgtgc
     1081 gcgtcgtggt gcaacttggc caagagctcg gcggtgaccg taacgccggc ggaccagacg
     1141 atctgcggtt tcaggatcac gcgcgtgatc gcgagcttgc cgcccgcgtt cttctcgagc
     1201 accccgacgg cgtcgtcgcg atacgagtcc agcgacaact tgtgcttcgc ggcgaccgcg
     1261 aggaatgtca gcatgtggca cgacgacaac gctgcgacga gagcctcctc ggggttcacg
     1321 cggctctcgt cgccgcgata ctccttggtc gccgaggcgg ggaccgtcac ggcagtgaac
     1381 cgccaatcgt gcgcgcggtt gtacgtctga tacgtgaaat cctgactcga acgttgccaa
     1441 acgatgctgg cgcggtgctc cgacatggtt agtccctcga ttcgtcgccg tgcggctgcg
     1501 cggcgagcgc ttcctgttct attttcgccc acgagtcgcg cagcgtcacc gtgcgattga
     1561 agacgggcgc gccgggcttc gacagcacgc gatccgcgac gaagtagccg agacgctcga
     1621 actgcacgcg ctcctcggcc agcgtctcgc ccagcgcggg ctcgatggcc gcacggctca
     1681 cgatcttcaa cgaatccggg ttcagc
//
LOCUS       DATCUD010000075         2478 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71780, whole genome shotgun sequence.
ACCESSION   DATCUD010000075 DATCUD010000000
VERSION     DATCUD010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2478)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2478)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71780"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..440)
                     /locus_tag="VIQ99_01095"
     CDS             complement(<1..440)
                     /locus_tag="VIQ99_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9181761.1"
                     /translation="MWTEWTIALKFLRERSLQTGLIVTGIAVGVAVIVFLTALSAGLQ
                     ANTIERTLGAQAHVRVLPPDEANVILPAPAGTTHLVREDKRAQRLRSINNWLSARDLL
                     DTVPRVTAVSPVVSGPAFARRGEAQVSVAIVGIDVPRYLRLVPLA"
     gene            complement(461..1657)
                     /locus_tag="VIQ99_01100"
     CDS             complement(461..1657)
                     /locus_tag="VIQ99_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015276638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9181762.1"
                     /translation="MRVSVYRAATSIGGIALALGVAVILVAAPWRAPEVVAYRLVTRP
                     LVQTVVATGRVIGVSRAQVGSEIAGVVTERRVVEGDRVAAGDVLATLRADDLAARVRE
                     AEAAIAQLETSTRPQSQVTLREAGVKLEQARRETERRRDLFTRQLLAVEAVEQAEQAE
                     TLARTAAERARLAAAALAPGGSEETLLRERLAAARADLAKTSVRAEVAGVVLTRGAEP
                     GDVVQPGRVLFEIASDGATELLVPVDEGNLATLALGQTAHCVADAYPGEVFAARVTLI
                     APRIDPRRGTVDVRLAVDPAPSYLRQDMTVSVNIETGRREQALAVPNDALFAVGGENA
                     TVFVVRDGRVAAVSVRLGLTGAGLTEVVSGLVSGDVVVAEPAAASYVGQRVRPIEQPV
                     PFTPSP"
     gene            complement(1685..2374)
                     /gene="folE"
                     /locus_tag="VIQ99_01105"
     CDS             complement(1685..2374)
                     /gene="folE"
                     /locus_tag="VIQ99_01105"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011705496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEY9181763.1"
                     /translation="MPAHLSLAPASLSPEAAAVRDALIARGLETPLVPVHHGAEEKRA
                     RIEASFTEILTTLGLDLTDDSLVDTPRRIAKMYVDEIFGGLDYRSFPKLTVVANKMAC
                     DEMIRVDGVSVSSTCEHHFVTIDGTATVAYIPKDKVIGLSKINRVVAFFAQRPQIQER
                     LTEQVLLALQTLLGTDDVAVSITAVHFCVRARGVMDSNSKATTTALGGAFKLSPETRK
                     EFLVGLGRAAA"
BASE COUNT          393 a          851 c          862 g          372 t
ORIGIN      
        1 gcgagcggca cgaggcgcag ataccgcgga acgtcgatgc cgacgatcgc gaccgagacc
       61 tgggcttcac cgcgacgggc gaatgccggc cccgagacca caggcgaaac agccgtcact
      121 cgcgggaccg tgtcgagcaa gtcgcgcgcg ctcaaccagt tgttgatcga gcgcaggcgc
      181 tgcgcccgct tgtcctcgcg cacgaggtga gtcgtcccgg caggcgccgg aagaatcacg
      241 ttggcctcgt ccggtggcag cacacgcacg tgcgcttggg cgccgagcgt gcgttcgatc
      301 gtattggcct ggagtcccgc gctaagcgcg gtcagaaaga cgatgacggc gacgccgacg
      361 gcaatgcccg tgacgatgag ccccgtctgc agcgagcgtt cccgcagaaa cttcagcgcg
      421 atcgtccact cggtccacat ggcgcggtaa cgtgcagcga tcagggcgaa ggggtgaagg
      481 gaacgggctg ctcgatcggg cggacgcgct ggccgacgta ggacgccgcc gcgggctcgg
      541 cgaccacgac gtcgccggag acgagtccgc tgacgacctc cgtgagaccc gcccctgtga
      601 gcccgagccg cacgctcacg gcggcgacgc gaccgtcgcg aacgacgaac accgtggcgt
      661 tctcgccgcc gacggcgaac agggcgtcgt tcggcaccgc gagcgcctgc tcgcgccgcc
      721 cggtctcgat gttgaccgat acggtcatgt cctggcgcag atagctcggc gccgggtcga
      781 cggcgaggcg cacgtcgacg gtgccgcgac gcgggtcgat ccgcggcgcg atcagcgtga
      841 cgcgcgcggc aaagacctcg ccggggtagg catcggccac gcaatgcgcc gtctgtccca
      901 gcgcgagcgt ggcgagatta ccttcgtcga cggggactag cagctcggtt gcgccgtcgc
      961 tcgcgatctc gaatagcaca cgtccgggct gcaccacgtc gccgggctct gcgccgcgcg
     1021 tgagcacgac acccgcgacc tcggcgcgca cgctcgtctt cgccaagtcc gcgcgcgcgg
     1081 cggcgagccg ctcacgcagt agcgtctcct cgctgccgcc aggtgcaagc gccgctgcgg
     1141 caagccgggc gcgctcggcc gccgtgcggg ccagagtttc ggcttgctcc gcctgctcca
     1201 cggcttccac cgcgaggagt tgccgtgtga agagatcgcg acggcgctcg gtttcgcgtc
     1261 gtgcctgctc gagcttcacc ccggcctcgc ggagggtcac ttgcgactgc ggccgtgtcg
     1321 aggtctcgag ctgggcgatg gccgcctcgg cctcacggac gcgggccgcg aggtcgtcgg
     1381 cccgcagcgt ggcgagcacg tcgcccgcgg ccacccggtc gccttccacg acgcgccgct
     1441 cggtcaccac gccggcgatc tcgctgccga cctgggcgcg cgatacgccg atgacgcggc
     1501 ccgtggccac gaccgtctgc accagtgggc gcgtgacgag gcgataagcg actacctcgg
     1561 gcgcgcgcca cggagcagcg acgaggatga cggccacccc cagggccagg gcgataccgc
     1621 cgatgcttgt cgcagcacga taaacgctca cccgcacgcg ccccgctgtt gactgcgcgt
     1681 agcgctacgc ggccgcacgg ccgagtccca ccaaaaactc cttgcgcgtc tccgggctca
     1741 gcttgaaggc accgccgagg gccgtcgtcg tggccttgct gttcgaatcc atgacgccgc
     1801 gcgcgcgcac gcagaagtgc acggccgtga tgctcacggc gacatcgtcg gtcccgagca
     1861 gcgtttgcag tgcaagcagc acttgttcag taaggcgctc ctgaatctgc ggccgctgcg
     1921 cgaagaacgc cacgacgcgg ttgatcttcg agaggccgat caccttgtcc ttcgggatat
     1981 aggccacggt ggcagtgccg tcgatcgtaa cgaagtggtg ctcgcaggtc gaggagacgc
     2041 tgacgccgtc gacgcgaatc atctcgtcac acgccatctt gtttgccacc accgtgagct
     2101 tcgggaagct gcggtagtcg agaccgccga aaatctcgtc gacgtacatc ttggcgatgc
     2161 gccgcggcgt gtccacgagg ctgtcgtcgg tcaagtcgag accgagcgtc gtcagtatct
     2221 cggtaaagct ggcctcgatt cgcgcgcgtt tctcctcggc cccgtgatgc acggggacga
     2281 gcggtgtctc gagaccgcgg gcgatcaagg cgtcgcgaac ggcagcggct tcgggcgaga
     2341 gcgaggccgg agccaggctc aggtgggcag gcatgcagac ggctttggcc gcgacaggat
     2401 tgacgctcat gggtggctcc tcgaacggta ggtgatcgcc accgtgttat tcgacggctg
     2461 gcccgtgacc ggattcac
//
LOCUS       DATCUD010000076         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71782, whole genome shotgun sequence.
ACCESSION   DATCUD010000076 DATCUD010000000
VERSION     DATCUD010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71782"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            151..501
                     /locus_tag="VIQ99_01110"
     CDS             151..501
                     /locus_tag="VIQ99_01110"
                     /inference="COORDINATES: protein motif:HMM:NF024252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY9181764.1"
                     /translation="MTDDDDQLRAFGDFVRAQRRLAQVSQRNLARMSGVSDSYLSQLE
                     RGNYRPSPQVVKALATAFGLEPKQLYMMLGFMDDGEGSGTPSVEQAIQLDPRLDAGQK
                     DALIRTYRSFIGGS"
     gene            537..>1786
                     /locus_tag="VIQ99_01115"
     CDS             537..>1786
                     /locus_tag="VIQ99_01115"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9181765.1"
                     /translation="MPSNHDEPTETRRDIEPKSRPWLALYREVPPTIQPATETALEMF
                     QATLARSPTAPLVRYFDYSLSAEDCDALSDALAVGLQERGVEAGDRVALYLQNIPQVV
                     ISVLAIWKCGAVVVPCNPMLRERELVKILTSSGSRVLISQEDLYEQVAHEALPQTAVK
                     HTITTSPLELLDPALPLPAVLAGMRRFRHTATTDLWQIAAARAGAKPRPLEITGDDIA
                     FMVYTSGTTGDPKGAMNTHRNVVFATSVYERWIALTGNDVILGLAPLFHVTGLIGHVA
                     LTLLTGAPLVLFYRFDPAEACRLTERYKATFTVSAVTAFIALLASGEFEKRNVRSLTK
                     VYTGGAPTPTTVLEDWHGRTGVRIQPMYGLTEATSPTHMTPHGAVPPVDARTGAVSVG
                     VPVFNTDVRIVTDVGLEAEPREIG"
BASE COUNT          317 a          618 c          571 g          280 t
ORIGIN      
        1 gtgaacgagc gctcgccgac gcgttcgaca aacgcaaagc ctgttgcgca attcgcaccg
       61 cgatgcgacg ccgtggcccg caaacccggc ttgacgcttc ggcggccgcg accataatcg
      121 atccacactc ctgttgcgga cgcgctaacg atgaccgacg acgacgatca attgcgagct
      181 ttcggcgact tcgtccgtgc gcaacgccgg ttggcacaag tttcgcaacg caatctcgcg
      241 cggatgtccg gagtctccga ctcctacctg agccaactcg agcgcggcaa ttaccgccct
      301 tcgcctcagg tggtcaaggc actggcgacc gcgttcggcc tcgagcccaa gcagctctac
      361 atgatgctcg ggttcatgga cgacggtgaa ggcagcggaa cgccgagcgt cgagcaggcg
      421 atccagctcg atccgcgtct cgacgccgga cagaaagatg cgttgatcag gacttaccgc
      481 tccttcatag gaggaagcta acggcgcgag tggtagctcg cgcaacgggt gcaacgatgc
      541 cgagcaacca cgacgaaccg accgaaacga gacgcgacat agagccgaag tcgcgaccct
      601 ggctcgctct ctatcgcgaa gtgccgccga cgatccagcc cgcgaccgag accgcgctcg
      661 agatgttcca agccacgttg gcgcggagcc cgaccgcgcc gctcgtgcgc tacttcgact
      721 actcgctgag cgccgaggac tgcgacgctc tgtccgacgc gttggccgtg ggcctgcagg
      781 agcgcggtgt cgaggccggc gatcgcgtgg cgctgtatct gcagaacatc ccgcaagtcg
      841 tgatctccgt gctcgcgatc tggaagtgcg gcgccgtagt cgtcccctgc aacccgatgc
      901 tgcgcgagcg cgagctcgtg aagattctca cgagctcggg cagccgcgtg ttgatctcgc
      961 aggaagatct gtacgagcag gtcgcgcacg aggcgttgcc gcaaactgcc gtcaagcaca
     1021 cgattacgac gtcgccgctc gagctgctcg atcccgccct gccgttaccg gccgtcctcg
     1081 ccggaatgcg ccgcttcagg cacacggcga cgaccgacct ctggcagatc gcagccgccc
     1141 gcgccggtgc caagccgcgc ccgctcgaga tcaccggcga cgacatcgcg ttcatggtgt
     1201 acacgtcggg cacgaccggc gacccgaagg gagccatgaa cacgcaccgc aacgtcgtgt
     1261 tcgcgacctc cgtctacgag cgctggatcg cgctgaccgg taacgacgtg atcttgggat
     1321 tggcgccgct gttccacgtc acgggactga tcggccacgt agcactcacg ctgctgacgg
     1381 gcgctccgct cgtgctcttc tatcgcttcg acccggccga ggcgtgccgg ctcaccgagc
     1441 gctacaaggc gacgttcacc gtgtcggccg tgacggcgtt catcgcgctg ctcgcgagcg
     1501 gcgagttcga gaagcgcaac gtgcggtcgc tgacgaaggt ctataccggc ggcgcgccga
     1561 ccccgacgac cgtgctcgag gactggcacg ggcgcaccgg cgtgcggatc cagccgatgt
     1621 acggcttgac cgaggcgacc tctccgacgc acatgacgcc gcacggcgcc gtgccgccgg
     1681 tggacgcccg caccggcgcg gtatcggtcg gcgtgccggt cttcaacacc gacgtccgca
     1741 tcgtgaccga cgtcgggctc gaggccgagc cccgcgagat cggcga
//
LOCUS       DATCUD010000077         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_839, whole genome shotgun sequence.
ACCESSION   DATCUD010000077 DATCUD010000000
VERSION     DATCUD010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_839"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VIQ99_01120"
     CDS             <1..294
                     /locus_tag="VIQ99_01120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181766.1"
                     /translation="VFYLSLGLTPVMLVQGLNICFLLGKSTQFTVLATRGGVSMHEWL
                     ATLPFVAIGVAGSLIGVRMRSRIDAVTFRVWVKRALFVIALGLIAQYGYSRFA"
     gene            complement(406..723)
                     /gene="grxD"
                     /locus_tag="VIQ99_01125"
     CDS             complement(406..723)
                     /gene="grxD"
                     /locus_tag="VIQ99_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015434527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEY9181767.1"
                     /translation="MNIQDVIKKQVTGNKVVLYMKGTPDFPQCGFSANAIGILRACGV
                     NDPYTVNVLEHSDIRQGIKEYANWPTIPQLYVNGEFIGGSDIMTEMYQSGELKKLLEK
                     AAA"
     gene            complement(786..>1525)
                     /gene="prmC"
                     /locus_tag="VIQ99_01130"
     CDS             complement(786..>1525)
                     /gene="prmC"
                     /locus_tag="VIQ99_01130"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011381924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY9181768.1"
                     /translation="ALGIDDARLAAHPEQPLTDEQHRRYRELVERRRAGEPVAYLTGE
                     REFYSLAFKVTPAVLIPRPETELLVETALARIPAQAACRVLELATGSGCVAVAIALNR
                     SQARVMATDASRDALAVARENAARHRARVEFVESDWFAALAGRRFDLIVANPPYVAER
                     DPCLAEGDLRFEPRAALVAGADGLTCIRLIIAQARAHLAPGGRLLFEHGYDQAERCRA
                     LLAEAGYHEATSHRDLAGIERVSEGRI"
BASE COUNT          244 a          510 c          478 g          293 t
ORIGIN      
        1 gttttttatc tctcgctggg tctcacgccc gtgatgctgg tgcaagggct caacatctgc
       61 tttctgctcg gtaagtccac gcagttcacg gtcctcgcga ctcgaggcgg cgtctcgatg
      121 cacgagtggc tcgccacgct gccgttcgtt gcgatcggag tcgcgggctc gctcatcggc
      181 gtgcgcatgc gcagccgcat cgacgccgtg acctttcgcg tgtgggtgaa acgcgcgctc
      241 ttcgtgatcg cattggggct gattgcgcaa tacggctatt cgcgcttcgc ctgagtggcg
      301 tgacacccgt gacctgccgg cactggcggc ccgccctcgg catgcagacc actaacgaaa
      361 acggccggct tcccgccggc cgttccattc gagcctgatc gattgtcagg cagcggcctt
      421 ttccagcagc tttttcagct ccccgctctg gtacatctcg gtcatgatat ccgagccgcc
      481 gatgaattcg ccgttcacgt agagctgcgg aatcgtcggc cagttggcgt actccttgat
      541 gccctggcgg atatcggaat gctccagcac gttgaccgtg tacggatcat tcacgccgca
      601 ggcgcgcagg atgccgatcg cgttcgccga gaagccgcac tgcgggaaat cgggcgtgcc
      661 tttcatgtac aggacaacct tgttgccggt cacctgcttc tttataacgt cctgaatatt
      721 catgagttat cctatatccg agtaattcac taagaaatta ttctagcggc tgcgaagccg
      781 catcgtcaaa tccgtccctc gctcactcgc tcgatgccgg cgaggtcgcg atgagaagtc
      841 gcctcatgat agccggcctc cgccaggagc gcgcggcagc gttcggcctg gtcgtatccg
      901 tgctcgaaca gcagcctgcc gccgggcgcg agatgcgcgc gcgcttgcgc gatgatcagg
      961 cgaatgcatg tgagcccgtc cgcgccggcg acgagcgccg cgcgcggctc gaagcgcagg
     1021 tcgccctcgg cgaggcaggg gtcgcgctcc gccacgtacg gcgggttcgc aacgatcaga
     1081 tcgaagcggc gaccggccag cgcggcaaac cagtcgctct cgacgaattc gacacgcgcc
     1141 cggtgccgtg ccgcgttctc gcgcgcgact gccagcgcgt cgcgcgacgc gtccgtcgcc
     1201 atcacccgtg cctgggagcg attgagcgca atcgccaccg caacgcagcc gctgccggtc
     1261 gcaagctcga gcacgcggca tgccgcttgc gccggaatgc gcgcaagtgc ggtttcgact
     1321 agaagctccg tttccggccg cgggatcagc actgccggcg tcaccttgaa cgcgagactg
     1381 tagaattcac gctcgcccgt gaggtaggcc accggctcac cggcgcggcg gcgctccacc
     1441 agctcacgat aacggcggtg ctgctcgtcc gtcagcggtt gctcgggatg cgcggcgagc
     1501 cgcgcgtcat cgatgccgag cgccg
//
LOCUS       DATCUD010000078         1881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71821, whole genome shotgun sequence.
ACCESSION   DATCUD010000078 DATCUD010000000
VERSION     DATCUD010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71821"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(207..917)
                     /locus_tag="VIQ99_01135"
     CDS             complement(207..917)
                     /locus_tag="VIQ99_01135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011719876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9181769.1"
                     /translation="MSKASSSKSVVVIGGTGGLGRAIAQHYADKGCNVVITGRDEERT
                     AAVAREIGGKTQPIAVDISEPETIEAKLAGLGHVDHLALVAVDRDYNSARDYNIERAR
                     KIVTLKLIGYTEVAHTLFPRMGAGASAVLFGGLASERPYPGSTSVTTVNGAVSSLIRT
                     LAVELAPVRFNAIHPGIISDTPAWADKKEAIANIEKRTPGGRLATTEDVVHAVDFMFV
                     NRGVNGINLVIDGGWLLT"
     gene            complement(914..1825)
                     /locus_tag="VIQ99_01140"
     CDS             complement(914..1825)
                     /locus_tag="VIQ99_01140"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9181770.1"
                     /translation="MHHHFIRAADVKPTPAFPKHAKGYRRFALSDRSVGAVHTGWGMS
                     ELDAGGHVDLAMQSFEESFYILAGNPTLILDGRGYRLSPGACGLIPVGMKHAWLGPAS
                     GTARWIDMNAPCPKGENFADGTYFLGAPPSVAVEDFDIRDVSSRHLFKMGEDDIKVDS
                     VRTGLKKDAAKVSASMATALLVYSGISLKMLVDQRLDAALHTMFMVEYEPNANAHPHD
                     HPLEEAYYVMHGEVEAWADDQKYLMKPGDFLWAGVGCTHAFYNRSNTTVRWLETQSPQ
                     PPARNSYRWARDWDYVAEQLKREGAAS"
BASE COUNT          288 a          587 c          647 g          359 t
ORIGIN      
        1 ttcagggctg ctcgatgtta ctcagcgagg attttcaaga cggcatggtc ttcggcggcg
       61 tcgccgtgcg aaatccgttc gcggcaagag ttgcggagca gcctgtcgag cacgcggtgc
      121 cgagggtgac cgtcgcacgt catcgcccgc gcggaaggcc gcgagccgcg gcgcgctgat
      181 gagtccttcc tagcgcggcg ttgcggttag gtcagcagcc agccgccgtc gatgacgagg
      241 ttgatgccgt tgacgccgcg gttcacgaac atgaagtcga cggcatgtac gacgtcctcg
      301 gtggttgcca gccgcccgcc cggcgtgcgc ttctcgatat tggcgattgc ttctttcttg
      361 tcggcccacg ccggcgtgtc ggaaatgatg ccggggtgaa ttgcgttgaa ccgcaccggg
      421 gcgagctcga ccgcgagagt gcgaatcaaa ctgctgaccg cgccgttgac ggtcgtgacg
      481 gacgtggagc cggggtaggg gcgttcgctc gcgagaccgc cgaacagcac cgcggacgcg
      541 ccggcgccca tgcgcgggaa cagcgtgtga gcgacctcgg tgtagccgat caacttcaac
      601 gtcacgatct tgcgtgcgcg ctcgatgttg taatcgcggg cgctgttgta gtcgcggtcg
      661 acggccacga gggcgagatg gtcgacgtgg ccgaggcccg cgagcttggc ctcgatcgtc
      721 tcgggttccg agatgtcgac ggcgatcggc tgtgtcttgc cgccgatctc tcttgcgacc
      781 gccgcggtgc gctcttcgtc gcggccggtg atgacgacgt tgcagccctt gtccgcgtag
      841 tgctgggcga tcgcgcgccc gaggccgcct gtgccgccga tcacgacgac gctcttgctg
      901 gacgatgctt tgctcatgag gcggcccctt cgcgctttag ttgttcggct acgtagtccc
      961 aatcgcgcgc ccagcgatag gagtttcgtg ccggcggttg cggcgattgt gtctcgagcc
     1021 agcgcaccgt cgtattgctg cggttgtaga acgcgtgcgt gcagccgacg ccggcccaga
     1081 ggaagtcgcc gggcttcatc aagtacttct ggtcgtcggc ccaggcctcg acctcgccgt
     1141 gcatgacgta gtacgcctct tcgagcgggt gatcgtgcgg gtgcgcgttc gcgttcggct
     1201 cgtattcgac catgaacatc gtgtgcagcg cggcgtcgag acgctggtcg acgagcatct
     1261 tgagcgagat gccgctatag acgagcaggg cggtcgccat gctcgccgaa accttcgccg
     1321 catctttctt gaggcccgtg cggacggagt cgaccttgat gtcgtcctcg cccatcttga
     1381 acagatgccg cgacgagacg tcgcgaatgt cgaagtcctc gaccgctacg gacggcggcg
     1441 caccaagaaa gtacgtgccg tcggcgaagt tctcgccctt cgggcacggc gcgttcatgt
     1501 cgatccaacg agcggtgccg ctcgcgggcc cgagccaggc gtgcttcatg ccgacgggga
     1561 tcagtccgca cgcgcccggc gacaagcgat agccgcggcc gtcgaggatc aaggtcggat
     1621 tgccggccag gatgtagaag ctctcctcga acgactgcat cgcaaggtcg acgtgcccgc
     1681 cggcgtcgag ctcgctcatg ccccagcccg tatggacggc cccgacggag cgatccgaca
     1741 aggcaaagcg ccggtagccc ttggcgtgct tcgggaatgc cggcgtcggt ttgacgtcgg
     1801 ccgcgcggat gaagtgatgg tgcatgtcga tctccgattc ccggcgtcgt ccctgaccgg
     1861 ccagcgcgaa ttatcgagtg t
//
LOCUS       DATCUD010000079         3403 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43341, whole genome shotgun sequence.
ACCESSION   DATCUD010000079 DATCUD010000000
VERSION     DATCUD010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43341"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            237..1007
                     /gene="coxB"
                     /locus_tag="VIQ99_01145"
     CDS             237..1007
                     /gene="coxB"
                     /locus_tag="VIQ99_01145"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEY9181771.1"
                     /translation="MSIAGPAWSDLGLNMPVGVTTTSRDVYELHMLILWVCTIIGLGV
                     YGAMVVAIVKFRKSKGAVPAKFTHNGTVEVIWTVIPAAILVAMAVPAAETLIRMEDTR
                     GSEVTIKVTGYQWRWHYDYIDEGVRFFSTLDRESNAARRKGSGIDPNTIDNYLLEVDK
                     EVVVPVNTKVRLLMTGADVLHSWWVPEFAVKKDAIPGFINEAWFNAHTEGTYRGQCAE
                     LCGMDHGFMPIVVRVTGQEEYEAWLNEQRAEVSSLASQ"
     gene            1051..2643
                     /gene="ctaD"
                     /locus_tag="VIQ99_01150"
     CDS             1051..2643
                     /gene="ctaD"
                     /locus_tag="VIQ99_01150"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY9181772.1"
                     /translation="MSSTAIDTQAHHGEHHSQGTLAWIMRWVTTTNHKDIGTLYLLFS
                     LLMLFVGGGMAMIIRLELFQPGMQFVRPEFFNSMTTVHALVMVFAMIMPAFAGFANWL
                     IPLMIGAPDMALPRLNNWSFWLLPFAVSLLVITLFLPGGAPAGGWTLYPPLVLQTGDA
                     FPFAIFAVHLLGVSSILAAINIIVTIMNLRAPGMTLLKMPMFVWTWLITAYLLVLAMP
                     VLAGAVTMLLTDRFFGTSFFSAAGGGDPVLFQHLFWFFGHPEVYIIILPAFGIISEII
                     PTFSRKPLFGYAAMVYATASIAFLSLVVWAHHMFTVGMPLAGQLFFMLSTMIIAVPTG
                     VKIFNWTATLWRGSLTFETPMLFALAFLFLFTLGGFSGLMLAIAPADIQYHDTYFVVA
                     HFHYVLVPGALFGALGGAYYWLPKMTGHMYDEKLGKLHFWLTTIFVNVTFFPQHFLGL
                     AGMPRRIPDYATQFTDFNALSSIGAFGFGVSQLLFVYIVIKCIRGGQKASAQVWEKPT
                     GLEWTVPSPAPHHTFDEPPVVK"
     gene            2640..2777
                     /locus_tag="VIQ99_01155"
     CDS             2640..2777
                     /locus_tag="VIQ99_01155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181773.1"
                     /translation="MSERTDEDAVRAAKVRRSAWALALLAVAFYLGFILWNVLRAPLG
                     G"
     gene            2785..3312
                     /locus_tag="VIQ99_01160"
     CDS             2785..3312
                     /locus_tag="VIQ99_01160"
                     /inference="COORDINATES: protein motif:HMM:NF003465.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEY9181774.1"
                     /translation="MNESPDRHLAWKVAGMSVAMFAFGFFVLPPLYDTICEITGFGGR
                     TAPTAAAVTPASEADQNRTVRVEFLASVARGAPWQLEPEVSHVEVQVGQLYETHYRAR
                     NLTGSTLVAQAVPSVAPGAAARYFNKTECFCFTSQEFKPHEEQTLKLAFMVAKDLPPQ
                     VDTLSLSYTYFSAPN"
BASE COUNT          566 a         1082 c         1073 g          682 t
ORIGIN      
        1 tacgaccccg gcggccggcc gaaatggcca cggaggtcag gatccccgtc ggcaacatcg
       61 gccgcccccc ggaaagtacg tagggtccag gctgcgatac ggttcctggc gtcggcggat
      121 gttctgctag aattcgcgcc gcgcggcggc ccttgggctc gcactccaca caataatttg
      181 caggacgcat gatcaacagg actcgtgttt tagcctccgt cctggctctg ctcggattga
      241 gcatcgccgg ccccgcctgg tccgacttag ggctgaacat gcccgtcggc gtcacgacga
      301 cgagccgtga cgtctacgag ctccacatgc tgatcctgtg ggtctgcacg atcatcggcc
      361 tcggtgtcta cggggccatg gtcgtcgcga tcgtgaagtt ccggaagtcg aagggcgccg
      421 tgccggccaa gttcacgcac aacggcaccg tcgaggtgat ttggaccgtc attccggccg
      481 cgatcctcgt cgcgatggcc gtgcccgcgg ccgagacgct gattcgaatg gaagatacgc
      541 gcggctcgga agtcacgatc aaggtcactg gctaccagtg gcgttggcac tacgactata
      601 tcgatgaagg cgtacgcttc ttcagcacgc tcgaccgcga aagcaacgcc gcgcgccgga
      661 agggctccgg tatcgatccg aacacgatcg acaactatct cctcgaggtc gacaaggaag
      721 tcgtcgtgcc cgtgaacacg aaggtgcggc tgctgatgac gggagccgac gtgctgcact
      781 cttggtgggt gccggagttc gccgtcaaga aggacgccat cccgggcttc atcaacgaag
      841 cttggttcaa tgcgcacacg gagggcacgt atcgcggcca atgcgccgag ctctgcggca
      901 tggatcatgg cttcatgccg atcgtggtgc gcgtcacggg ccaggaagag tacgaggcct
      961 ggctgaacga gcagcgagcg gaagtgagct cgctcgcctc gcaatgactc gcgcgctcgg
     1021 acgcaggcca ctgaacaagg aagcatcgga atgagcagca ccgcaatcga cacccaggcc
     1081 caccacggcg agcatcactc gcaaggaacg ctcgcctgga tcatgcgctg ggtcacgacg
     1141 acgaatcaca aagacatcgg cacgctgtac ctgctgttca gcctactgat gctgttcgtc
     1201 ggcggcggca tggcgatgat cattcgcctc gagctgttcc agcccggcat gcaattcgtg
     1261 cggcccgagt tcttcaactc gatgacgacg gtgcacgcgc tcgtgatggt gttcgcgatg
     1321 atcatgccgg cgttcgcagg attcgcgaac tggctgatcc cgctcatgat cggagcgccg
     1381 gatatggcgc tgccgcggct gaacaattgg tcgttctggc tgctgccgtt cgcggtaagt
     1441 ctgctcgtga tcacgctgtt cttgccgggc ggcgcgccgg cgggcggttg gacgctgtac
     1501 ccgccgctcg tgctgcaaac cggcgatgcg ttcccgttcg cgatcttcgc cgtccacctg
     1561 ctcggcgtgt cctcgatcct ggccgcgatc aacatcatcg tgacgatcat gaacctgcgc
     1621 gcaccgggaa tgacgctgct gaagatgccg atgttcgtct ggacgtggct gatcacggcg
     1681 tatttgctcg tgctggcgat gccggtgctg gccggcgcgg tcacgatgct gctgacggat
     1741 cgcttcttcg gcacgagctt cttctcggcc gcgggcggcg gcgaccccgt gctgttccag
     1801 cacctgttct ggttcttcgg ccaccccgag gtgtacatca tcatcttgcc ggcgttcggc
     1861 atcatctcgg agatcattcc gacattctcg cgcaagccgc tgttcggcta tgccgcgatg
     1921 gtgtatgcca cggcgagcat cgcgttcctg tcgctcgtgg tttgggcgca ccacatgttc
     1981 acggtcggca tgccgctcgc ggggcagctg ttcttcatgt tgagcacgat gatcatcgcc
     2041 gttccgaccg gcgtgaagat cttcaactgg acggccacgc tgtggagagg ctcgctgacg
     2101 ttcgagacgc cgatgctgtt cgcgctcgcg ttcctgttcc tgttcacgct cgggggcttc
     2161 tcgggcctca tgctcgcgat cgccccggcc gacatccagt accacgacac ctatttcgtc
     2221 gtcgcacact tccattacgt gctcgtgccg ggtgcgttgt tcggggcgct cggcggtgcg
     2281 tattactggc tgccgaagat gacgggccac atgtacgacg agaagctcgg caagctgcac
     2341 ttctggctga ccacgatctt cgtcaacgtc acgttcttcc ctcagcattt cctgggcttg
     2401 gccggcatgc cgcgccggat tccggactac gctacgcagt tcacggactt caacgccctc
     2461 tcgagcatcg gcgcgttcgg cttcggtgtg tcgcagctgc tgttcgtcta tatcgtgatc
     2521 aagtgcatcc gcggcggcca gaaagcgtcg gcgcaggtct gggaaaagcc gactggcctc
     2581 gaatggaccg tgccatcgcc ggctccgcac cacacgttcg acgagccgcc cgtcgtcaaa
     2641 tgagcgagcg aaccgacgag gacgcggtgc gtgccgccaa ggtgcgccgg agcgcttggg
     2701 ctttggcgtt gctcgctgtg gccttttact tgggcttcat cctctggaac gtgctgcgcg
     2761 cgccgctcgg cgggtgagaa cgcgatgaac gagtcgccag atcgtcatct cgcgtggaag
     2821 gtcgccggca tgagcgtcgc gatgttcgcg ttcggctttt tcgttttgcc gccgctttac
     2881 gacacgatct gcgagatcac gggcttcggc ggtagaaccg cgccgaccgc ggctgcggtg
     2941 acgcctgcga gcgaagctga tcagaatcgc acggtgcgcg tggaattttt ggcctcggtc
     3001 gcgcgcggcg cgccgtggca gctcgagccc gaggtcagcc atgtcgaggt gcaagtgggc
     3061 cagctctacg aaacgcacta ccgcgcgcgc aacctcacgg gctcgacgct cgtggcccag
     3121 gccgtgccga gcgtcgcgcc gggcgcggcg gcgcgctatt tcaacaagac cgaatgtttt
     3181 tgcttcacga gccaggagtt caagccgcac gaggagcaga ccctgaagct cgcgttcatg
     3241 gtggcgaagg atctcccgcc ccaagtggat acgctctcgc tgtcgtacac ctatttttcc
     3301 gctccgaact gaggactcgt ccgtcatggc acacgcccca agccactact acgtaccgca
     3361 cggcacgcgg tggccgatct tcggctcgat cggcctcttc acg
//
LOCUS       DATCUD010000080         3128 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7871, whole genome shotgun sequence.
ACCESSION   DATCUD010000080 DATCUD010000000
VERSION     DATCUD010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3128
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7871"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..775
                     /locus_tag="VIQ99_01165"
     CDS             <1..775
                     /locus_tag="VIQ99_01165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181775.1"
                     /translation="HEFGYTEIREFARKVLVSLSAEAPGVAHVALTIHGPGYGLDEIE
                     AFESEVAGIVDAVTNGEFPRALRVITFVERNARRAHRLAMALKRLLPDGILSIDGRGS
                     ISVLEDQAQSTLRTAGYSSASKPHVFVAMPFAEEMDDVFHYGIQGAVNGAGLLCERAD
                     LSVFTGDVVDWVKRRIASATLVVADLSSANPNVYLEVGYAWGCRIPTILLSRDPNDLR
                     FDVKGQKCIVYKSIKSLEEALRRELIGLSKSGPGANFQG"
     gene            complement(852..1325)
                     /locus_tag="VIQ99_01170"
     CDS             complement(852..1325)
                     /locus_tag="VIQ99_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012272690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY9181776.1"
                     /translation="MNTAVTSAPGSPAGLRAAWNRTADALERLIGHSLLALAARFGIA
                     GIFFLSGRTKVEGWLAVSDNAVALFADEYKVPLLSPALAAHLATYAEHLYPILLVLGL
                     FTRLSALALLGMTAVIQFFVYPDAWATHLSWAGLLLYLMGRGAGIWSLDRVLGLR"
     gene            complement(1322..2119)
                     /locus_tag="VIQ99_01175"
     CDS             complement(1322..2119)
                     /locus_tag="VIQ99_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015015877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HEY9181777.1"
                     /translation="MRLHQFQRGFANALRAPELRPDDFPPEISRLVVQPAFAVYRNTV
                     TKGCIDALQANYPSVARLVGEEWFRAAAAIFVRANLPRHPTLAIYGEGFADFLAAFAP
                     AAELPYLPGVARLDRFWTEAHTAPDETPVDAASVARLEPESLARTVLRPHASARWAWF
                     DGQPIATIWRRNRYPDESDKSGFDWRAEGVLVVRPGGGVANIDLDAAGCAFLDVCASG
                     GTLAEAAASALAADAEADLAHLMARLLEAGAFGRLTIVEHEAKEHCR"
     gene            complement(2116..2949)
                     /locus_tag="VIQ99_01180"
     CDS             complement(2116..2949)
                     /locus_tag="VIQ99_01180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015015876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HEY9181778.1"
                     /translation="MQPSAGLGLKPQHFDEALAAPADGLWFEVHPENYMVAGGPRLGW
                     LEAIRARHPLSLHGVALSLAGDAPPDAAHLRRLAALVTRFEPALVSEHLAWSTWEGAY
                     RPDLLPFPRTSEALARIAGNVGRVQDALDRTIAIENPSHYLAIDAHDWDEIGFLADLA
                     RRTGCRLLLDVNNVFVSARNLGLSAEDYVDAFPGALVDEIHLAGHTADAALGAALLVD
                     SHDAPVDPAVWTLYERLVARIGPRPTLIERDGNLPGFDALLAERARAEEALRAPFRDA
                     A"
     gene            complement(2965..>3128)
                     /locus_tag="VIQ99_01185"
     CDS             complement(2965..>3128)
                     /locus_tag="VIQ99_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003292927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2282 domain-containing protein"
                     /protein_id="HEY9181779.1"
                     /translation="LAGKNDCQAGPGTTCADTSKTDYQGNAWKYVAKGTCTTMKTPTG
                     MGSLTPVKG"
BASE COUNT          509 a         1045 c         1101 g          473 t
ORIGIN      
        1 ccacgagttc ggctacaccg agatccgcga gttcgctcgc aaggtcttgg tgtctctttc
       61 ggccgaggca cccggtgtgg cgcacgtcgc actcacgata cacgggccgg gatacgggct
      121 cgacgaaatc gaagcattcg agtcggaagt ggccgggatc gtcgacgcgg tcacgaacgg
      181 cgagttcccg cgggcgctcc gggtcatcac gttcgtggag aggaacgcca gacgggcaca
      241 ccggctggcg atggcattga agcggcttct tcccgacgga atcctctcga tcgacggccg
      301 cggatcgatc tcggtcctgg aggatcaagc ccagagcact ctgcgcaccg ccggctattc
      361 atcggcgtcg aagccccacg tcttcgtggc gatgccgttc gccgaagaga tggatgacgt
      421 gtttcactac ggaatccagg gcgccgtgaa cggcgcggga ttgctgtgcg agagggccga
      481 cctttccgtg tttaccggcg acgtagtcga ctgggtgaag cggcgcatcg ccagcgccac
      541 gctcgttgtc gccgatcttt cgtcggccaa ccccaatgtg tacctggaag tcggctatgc
      601 ctggggctgc cgcattccga cgatattgct gtcccgggac cccaacgacc tgaggtttga
      661 cgtgaaaggc cagaagtgca tcgtctacaa gtcgatcaag tcactcgaag aggccctgcg
      721 ccgcgagctg atcggccttt cgaagagcgg ccctggggcg aattttcaag gttaggcaca
      781 gagggaggcc gcgcaacgac cgatcgcgtc ctgcagatgc agttcgtcgg gcgcttccga
      841 cgtgcaccgc ctcacctcaa tcccagcacg cgatcgagcg accagatccc cgcaccgcgc
      901 cccatcaagt agagcagcag gccggcccag gagaggtggg tcgcccaggc gtccgggtag
      961 acgaagaact ggatcaccgc ggtcatcccg agcagcgcga gcgcggaaag acgcgtgaag
     1021 aggccgagca cgaggagaat cgggtagagg tgctcggcgt aggtcgcgag atgcgcggcg
     1081 agcgcgggtg aaagcagcgg caccttgtat tcgtcggcga atagcgccac cgcgttgtcg
     1141 ctgacggcca gccagccctc gactttcgtg cggccggaca ggaagaagat gccggcaatg
     1201 ccgaaccttg cggcgagcgc gagaagcgaa tgcccgatca ggcgctcgag cgcatcggcg
     1261 gtgcggttcc acgcggcgcg caggccggcc gggctgccgg gtgcggaagt gacggcggtg
     1321 ttcatcggca atgctccttc gcttcgtgtt cgacgatcgt cagccgcccg aaagccccgg
     1381 cttcgagcag ccgcgccatg aggtgcgcga ggtccgcttc tgcgtccgcg gccagcgcgc
     1441 tcgctgcggc ttccgccagc gtgcccccgg acgcgcagac gtccaggaat gcgcaccccg
     1501 ccgcgtcgag gtcgatgttc gcgacgccgc cccccgggcg tacgaccagc acgccttccg
     1561 cgcgccagtc gaatccgctc ttgtcgctct cgtccggata tcgattacgc cgccagatcg
     1621 ttgcgatcgg ctgcccgtcg aaccacgccc agcgggcact ggcgtgcggc cggagcaccg
     1681 tgcgcgcgag cgattccggc tcgagccgcg cgacggacgc cgcgtcgacc ggcgtctcgt
     1741 cgggcgcggt gtgcgcctcg gtccagaacc ggtccagccg cgcgacgccc ggcagatagg
     1801 gcagctcggc cgccggcgcg aaagcggcca ggaaatccgc gaagccttcg ccgtagatcg
     1861 cgagcgtcgg atgccggggc aagttcgctc gcacgaagat cgccgccgcc gcgcgaaacc
     1921 actcttcccc gaccagccgc gcgaccgacg ggtagttggc ctgcagcgcg tcgatgcagc
     1981 ccttcgtcac cgtgttgcgg tacacggcga aggccggctg cacgacgagt cgcgagatct
     2041 ccggcgggaa gtcgtccggg cgcagctcgg gtgcgcgcaa tgcgttcgcg aaccccctct
     2101 ggaactggtg gagcctcacg cggcgtccct gaagggcgcg cgaagcgcct cctcggcccg
     2161 cgcgcgctcg gcaagcaggg cgtcgaaccc agggaggttg ccgtcgcgct cgatcagcgt
     2221 gggccgcggg ccgatgcgcg cgaccaaccg ctcgtacagg gtccataccg ccggatcgac
     2281 cggcgcgtcg tgcgagtcga cgaggagcgc cgcgccgagc gcggcatcgg ccgtgtgccc
     2341 cgcgaggtga atctcgtcga ccagcgcacc ggggaacgcg tcgacatagt cctcggccga
     2401 caggccgagg ttgcgtgcgg agacgaacac attgttgaca tcgaggagca gccggcagcc
     2461 ggtgcgccgc gcgaggtcgg caaggaagcc gatctcgtcc caatcgtgag cgtcgatcgc
     2521 gaggtagtgc gacgggttct cgatcgcgat cgtccggtcg agcgcatcct gcacccggcc
     2581 gacgttgccc gcgatccgcg cgagcgcttc gctcgtgcgc gggaacggca gcagatcggg
     2641 acggtacgcg ccctcccacg tcgaccatgc gaggtgctcg gagaccaaag ccggctcgaa
     2701 gcgcgtcacc agcgcggcga gacggcgcag gtgcgccgcg tcgggcggcg catcgccggc
     2761 gagcgagagc gcgacgccgt gcagcgagag cgggtgccgt gcgcgaatcg cctcgagcca
     2821 gccgaggcgg ggtccgccgg cgaccatgta gttttccggg tgaacctcga accacaaccc
     2881 gtccgcgggc gcggccagtg cctcgtcgaa gtgctggggc ttcaggccga gcccggcgga
     2941 gggttgcatg gtcgtcgacg cgggtcagcc cttgaccggt gtgagcgatc ccatgccggt
     3001 cggcgtcttc atcgtggtgc aggtcccctt ggcgacgtac ttccaggcat tgccctggta
     3061 atcggtcttc gacgtgtcgg cgcaggtcgt gcccgggccg gcctggcagt cgttcttgcc
     3121 ggcgagcg
//
LOCUS       DATCUD010000081         2131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15026, whole genome shotgun sequence.
ACCESSION   DATCUD010000081 DATCUD010000000
VERSION     DATCUD010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15026"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..528)
                     /locus_tag="VIQ99_01190"
     CDS             complement(130..528)
                     /locus_tag="VIQ99_01190"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181780.1"
                     /translation="MNTKLTLMAATAALVTGTAVAHHSFSAEFDPDRPVTLTGKVTEV
                     KFSNPHAWIYIDVTGDDGKVVNWALEMSGANGLIRRGWRREDLPTGTVLMVEGWQARN
                     ATPTANIATVTFTDGRTLFAGSSNPAARQQ"
     gene            complement(531..2081)
                     /locus_tag="VIQ99_01195"
     CDS             complement(531..2081)
                     /locus_tag="VIQ99_01195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181781.1"
                     /translation="MSRALLVSLAFAAAAPSAAQTLPRTADGKPDLQGIWQAHNRAAY
                     GLEHHDAKHGMPAGPSVVDGGEIPFLPAARAQQRANFEARATADPLNNCYLPGVPRIM
                     YMEYPFQIFQTPEHVAITFEWSQVYRLIYTNGQPTLHEGIESWMGNSRGRWEGDVLVV
                     EVTGFNDRTWLDAAGTFHSNELRVTERYALRDANTIDYSATIEDPQVFSRPWTIRVPL
                     HRQTDLPRLYEYQCQAEKEEANGAFERDPRTWYPAPIPSDNAPFDARAGAALAPPAVT
                     GTIRRLPDGKPDISGWYQLDAGGGNYGLEGRPQEFLTPASRGLVIDPPDGKLPYQAWA
                     RAERIAREQPHRGYDDPTAHCFVAGIPRSHYVPQPVHILQPPGFVVVLFERMSWRHIA
                     LTPRAPLPDHVRLWQGDSAGRWEGDTLVVESRNFNGKAWLNEVGDVISHAQTVVERFT
                     PVDEDSLIYRATVSDPIAYTRPWTIEVPMHRMNDELLEVACHEDNQDLEHLKHVRDEY
                     RATQQGGN"
BASE COUNT          326 a          696 c          724 g          385 t
ORIGIN      
        1 cgcggccgac tacacggacg aggaggcgct cgagaacccc tccatggagg gctgtcgtga
       61 tgacgaggcg gatctcgcgt gttcctccgt ggaggtgcgc gagcctcgcg ccgtttatcg
      121 cctgcgcagc tattgctgac gcgcggccgg gttcgacgac cccgcgaaca gcgtgcggcc
      181 gtccgtgaac gtgaccgtgg cgatgttcgc ggtcggcgtg gcgttacgcg cttgccaacc
      241 ctcgaccatg agcacggtcc ccgtcggcaa gtcttcgcgg cgccagccgc gtcggatcag
      301 gccgttcgcg ccgctcatct cgagcgccca attcacgacc ttgccgtcgt cgccggtcac
      361 gtcgatgtag atccacgcat gcgggttcga gaacttcact tcggtgacct tgcccgtgag
      421 cgtcacgggc cggtccggat cgaactcagc ggagaaggag tgatgggcaa cggcggttcc
      481 ggtgacgagc gcggcggttg cagccatgag agtgagtttc gtgttcatgc ctaatttcct
      541 ccttgctgcg tagctcggta ctcgtcgcgc acgtgcttca agtgctccag gtcttggttg
      601 tcctcgtggc acgcgacctc gagcagctcg tcgttcatgc ggtgcatcgg cacctcgatc
      661 gtccacggcc gagtgtaggc gatcggatcg ctgacggtcg cgcgatagat caggctatct
      721 tcatcgacgg gcgtgaagcg ctcgacgacg gtttgtgcgt ggctgatcac gtcgccgacc
      781 tcgttcagcc acgccttgcc attgaagttc ctgctctcga cgacgagcgt gtcgccttcc
      841 cagcggccgg ccgaatcgcc ttgccacaaa cgaacgtggt cgggcaacgg tgcgcgcggc
      901 gtcagcgcga tgtggcgcca cgacatgcgc tcgaacagca cgacgacgaa ccccggcggc
      961 tgcaggatgt ggacgggctg cggcacgtag tgcgagcgcg ggattccggc cacgaagcaa
     1021 tgcgccgtcg ggtcgtcgta cccgcggtgc ggctgctcgc gcgcgatgcg ctcggcgcgc
     1081 gcccaggcct ggtacggcag cttgccgtcg ggcgggtcga tcacgaggcc gcggctcgca
     1141 ggggtcagga actcttgcgg ccggccctcg agcccgtagt tgccgccgcc ggcgtcgagc
     1201 tgataccagc cggaaatatc gggcttgcca tccggcaatc tgcgaatcgt gcctgtgacc
     1261 gcgggcggtg cgagcgccgc acccgcgcgc gcgtcgaacg gcgcgttgtc ggacgggatc
     1321 ggcgccggat accaggtcct cggatcgcgc tcgaacgcgc cgttcgcttc ctctttctcg
     1381 gcctggcact ggtactcgta caacctcggc aagtcggtct gccgatgcag cggcacgcga
     1441 atcgtccatg gccgcgagaa cacctgcggg tcctcgatcg tcgccgagta atcgatcgtg
     1501 ttcgcgtcgc gcagcgcgta gcgctccgtg acgcggagct cgttgctgtg gaacgtgccc
     1561 gcggcgtcga gccaggtgcg gtcgttgaag cccgtgacct cgacgacgag cacgtcgcct
     1621 tcccagcggc cgcgcgagtt acccatccac gactcgatgc cttcgtgcag cgtcggctga
     1681 ccgttcgtat agatcagccg atacacctgc gaccactcga acgtgatcgc aacgtgctcc
     1741 ggcgtttgga agatctggaa cgggtactcc atgtacatga tccgcggtac gcccggcaga
     1801 tagcagttgt tcagcggatc ggcggtcgcg cgagcctcga aattcgcgcg ctgctgcgcg
     1861 cgcgccgccg gcaagaacgg aatctcgccg ccgtcgacga cgctcgggcc cgcgggcatg
     1921 ccgtgcttcg catcgtgatg ctcgaggccg tacgcggcgc gattgtgagc ctgccagatg
     1981 ccttgcaggt caggcttgcc gtcggcggtg cgcggcaacg tttgtgcggc cgacggggcg
     2041 gcggccgcaa atgccaagga gacgagtagg gcgcgagaca tcgaaacctc tcgggtattg
     2101 cacccgctca tatactcaat ggccgggagc g
//
LOCUS       DATCUD010000082         2189 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_57577, whole genome shotgun sequence.
ACCESSION   DATCUD010000082 DATCUD010000000
VERSION     DATCUD010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57577"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1424
                     /gene="trkA"
                     /locus_tag="VIQ99_01200"
     CDS             48..1424
                     /gene="trkA"
                     /locus_tag="VIQ99_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007039097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEY9181782.1"
                     /translation="MKILILGAGQVGSTAAFSLAREEANEVTIVDRNPEVLRELQDRL
                     DVRTVVGNASHPDVLERAGARDADMLIALTSSDEINMLACQIALTLFRTPTRIARIRA
                     RALIANEALFGPGGIPVDVAISPSSLVTDYIAQLIRFPGALQVLDFADGKVRLVATRA
                     NRDGALVGHPLRDLPQHIPNVESRVVAIYRGGKGVIPDGDTVVEEGDEVFFLAARDNA
                     RTVLREMRKLDDPVRKVVIAGGGNIGLDLARALEGSCQVKIIERDWQQARRISDQLRR
                     AIVLHGDSADEELLLEENIDSADVFVAVTNAEEANILSAMLAKRLGARKVMALINRIA
                     YAELVEAGTIDIAISPQQITLGTLLAHVRRGDVVKVHSLRRGAAEAIEAVAHGEARES
                     RVVGRLIDEIELPRGATISAIVRGDEVLMAHHDTQIKADDHVILFIADRRQIDEVERL
                     FEVGSVLV"
     gene            complement(1445..>2189)
                     /locus_tag="VIQ99_01205"
     CDS             complement(1445..>2189)
                     /locus_tag="VIQ99_01205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181783.1"
                     /translation="IRSIGTAFAVTVLLAAATSFAQENRTGTTRLLVTHVRVPPARVA
                     TWLELQRNEVIPALKKAGLENYTTYQTVVGEVTEFVIVRPFAFAELDAQDALDRALGA
                     NAAAALRAKLRDCTESMHRSIENRHDDLFLDPGAAAVLFVSRYRAMPGRARDYMSFVR
                     SEMYPVMKQAQEEGTFAGLSVTTSVQGGEPGIITLNMHYETFAPLDGPPPVAKTLGPQ
                     GTAAFLAKGAGLIEQVDQSILRRIADLSF"
BASE COUNT          370 a          725 c          743 g          351 t
ORIGIN      
        1 ggaaggcacg ctcggcacac aagcgcggaa gcgctaggcc tcatcgcatg aagatcctca
       61 tccttggggc tgggcaggtg ggcagcacgg cggcgttcag cctcgcgcgc gaggaggcca
      121 acgaggtcac gatcgtcgac cgcaaccccg aggtcctgcg cgagctgcaa gatcgcctcg
      181 acgtccgcac cgtcgtcggg aacgcttcgc atcccgacgt cctcgagcgc gcgggcgcac
      241 gcgacgccga catgctgatt gcgctcacga gcagcgacga gatcaacatg ctcgcgtgcc
      301 agatcgcgct gacgctgttc cgcacgccga cccggatcgc gcgcatccgc gcgcgtgcgc
      361 tgatcgccaa cgaagcgctg ttcggcccgg gcggcatccc ggtcgacgtc gcgatcagcc
      421 cgtcgtcgct cgtgacggac tacatcgccc agttgatccg cttcccgggc gcgctccagg
      481 tgctggattt cgccgacggc aaggtgcgat tggtcgcgac gcgcgcgaac cgcgacggtg
      541 cgctcgtggg acacccgctg cgcgacctgc cgcagcacat cccgaacgtc gagagccgcg
      601 tcgtcgcgat ctatcgcggc ggcaagggcg tgatcccgga cggcgacacg gtcgtcgagg
      661 aaggcgacga agtgttcttc ctcgcggcgc gcgacaacgc tcggacggtg ttgcgcgaga
      721 tgcgcaagct cgacgatccc gtgcgcaagg tcgtgatcgc cggcggcggc aacatcggcc
      781 tggacttggc gcgcgcgctc gagggcagct gccaggtcaa gatcatcgag cgcgactggc
      841 agcaagctcg ccgcatctcg gatcagctca ggcgtgcgat cgtgttgcac ggcgactctg
      901 cagacgaaga gttactgctg gaggagaaca tcgacagcgc agacgtgttc gtcgcggtca
      961 cgaatgccga ggaagcgaac atcttatcgg cgatgctcgc gaaacggctc ggcgcgcgca
     1021 aagtcatggc tctgatcaac cggattgcgt atgcggagct cgtggaagcg ggcacgatcg
     1081 acatcgcaat ctcgccgcag cagatcacgc tcggaacgct gctcgcgcac gtgcgccgcg
     1141 gcgacgtcgt gaaagtgcat tctctgcggc gcggcgccgc cgaggccatc gaagccgtcg
     1201 cgcatggcga ggcacgcgag tcacgcgtcg tcggccggtt gatcgacgag atcgagctgc
     1261 cgcgcggcgc gacgatcagc gcgatcgtgc gcggcgacga ggtgctgatg gcgcaccatg
     1321 acacgcagat caaggccgac gatcacgtga tcctgttcat cgccgatcgg cgccagatcg
     1381 acgaggtcga gcgactgttc gaggtcggca gcgtgctcgt ctgagcctga gcggtgggcc
     1441 gcggctagaa gctcaggtcc gcgattcgcc gcaggatgct ctgatcgacc tgctcgatca
     1501 ggccggcgcc cttggccagg aacgctgccg taccttgcgg gccgagcgtc ttggccaccg
     1561 gcggcggccc atcgagcggc gcgaacgtct cgtagtgcat gttcaaggtg atgatgccgg
     1621 gctcgcctcc ctgcacggac gtcgtgaccg acagccccgc gaaagtgccc tcctcctgcg
     1681 cctgtttcat cacggggtac atctcggaac gcacgaagct catgtagtcg cgcgccctgc
     1741 ccggcatcgc gcggtagcgg ctcacgaaca gcacggccgc ggcgcccggg tcgaggaaca
     1801 ggtcgtcgtg gcgattctcg atggagcgat gcatcgactc cgtgcagtca cgaagcttcg
     1861 cacggagcgc ggcggcggcg ttggcgccga gggcgcgatc gagcgcgtct tgcgcgtcga
     1921 gctccgcgaa cgcgaatggt cgaacgatca cgaactccgt gacctcgccg accacggttt
     1981 gatatgtcgt gtaattctcg agaccggcct tcttcagcgc ggggatgacc tcgttgcgct
     2041 gcagctcgag ccacgtcgcg actctcgccg gcggcacgcg aacgtgggtc acgagcagcc
     2101 gcgtcgttcc ggttcggttt tcttgcgcga agctcgtcgc cgcagccagc aacaccgtta
     2161 ccgcgaacgc cgttccgatc gatcttatc
//
LOCUS       DATCUD010000083         2739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15028, whole genome shotgun sequence.
ACCESSION   DATCUD010000083 DATCUD010000000
VERSION     DATCUD010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15028"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VIQ99_01210"
     CDS             complement(<1..1053)
                     /locus_tag="VIQ99_01210"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9181784.1"
                     /translation="MTIDRRQLLAGVGAVGVAAAVVGRATAQSSRAKVIDVHTHMYSQ
                     GWVKAVNDAADPNFRIGENNALIYRGGGIGRMTPPMLDWDLRIKDMDDAKVDVGLISL
                     TAPNVYWGTRAQSVAAARSINDDFAAAQRKYDGRVRWFASLPFQYEDDALAELKRAKD
                     GGAIGVCTLTNILGAPLTAPQYRRIFRECAAMQLPVFVHPTTPFTDGMGLADFGLGNT
                     IGFTSDTTLFVARMILDGVLDELPNLELIACHGGGAFPYLAARFDIMWERTVSARKNQ
                     APPSTYLRRFWYDSIVYDQPTLDFLVQRVGADRVLYGSDYPFTIGDMKGMLARVDALP
                     SERRDAVRSGNAERLFD"
     gene            complement(1192..1791)
                     /locus_tag="VIQ99_01215"
     CDS             complement(1192..1791)
                     /locus_tag="VIQ99_01215"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEY9181785.1"
                     /translation="MAGTVVGIVLAGGRSVRFGGEKAVAQLDDRPLLAWAAQRLRTVC
                     ANVAINVRPGTEAEAVARALGFPTLNDDAGDALGPLAGVKVGLVWAEGQGAQMLAVSP
                     CDAPLLPDDLYVRLLECADSGAVMAETRDGRQPLCALWPVAALPAVRDALAGGAHPPT
                     WQLLERLGARKVFFEPPESFANVNTPDELAAVQARRARM"
     gene            complement(1794..2294)
                     /gene="mobB"
                     /locus_tag="VIQ99_01220"
     CDS             complement(1794..2294)
                     /gene="mobB"
                     /locus_tag="VIQ99_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007439650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEY9181786.1"
                     /translation="MRLIGLAGWSGSGKTTLLAKLLPVLIARGRSVSTLKHAHHAFDV
                     DQPGKDSHTHRLAGAYEVLVSSARRWALMHELRDEAEPTLRELIPHLSPVDLVIVEGF
                     KTDTHAKLEVHRSEAGKPLLYPQDPNIVAIASNLTAKVPLPSADLNDIEAIADLVDEL
                     ARPYPP"
     gene            complement(2297..>2739)
                     /locus_tag="VIQ99_01225"
     CDS             complement(2297..>2739)
                     /locus_tag="VIQ99_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY9181787.1"
                     /translation="ADGRGKIVPADLLPPDELPDEEYPLVLTTGRLLEHWHTGSMTRR
                     AGVLDAIEPVGIAAMNPRDMQKRGLHQGDRISVETRRGVLEAILRADREVAEGMVFMP
                     FCFAESPANRLTNPKLDPFGKIPEFKYCAARVERAGETATAAAG"
BASE COUNT          447 a          946 c          882 g          464 t
ORIGIN      
        1 gtcgaacagc cgctccgcgt tgccgctgcg gacggcgtcg cgccgctcgg acggcaacgc
       61 atcgacacgc gcgagcatgc ccttcatgtc gccgatcgtg aacggatagt cggagccata
      121 cagcacgcga tcggcgccga cgcgctggac gagaaaatcg agcgtgggtt gatcgtagac
      181 gatcgagtcg taccagaatc gtctcaggta cgtggacggc ggcgcctgat tcttgcgcgc
      241 gctgaccgtg cgctcccaca tgatgtcgaa ccgcgcggcc aagtacggga acgcgccgcc
      301 gccgtggcag gcaatcagct cgagattcgg cagctcgtcg agcacgccgt ccaagatcat
      361 tcgcgcgacg aacagcgtcg tgtccgacgt gaagccgatc gtgttgccga ggccgaagtc
      421 cgcgaggccc atgccgtcgg tgaacggcgt cgtgggatgc acgaacacgg gcagctgcat
      481 ggcagcgcat tcgcgaaaga tccgtcgata ctgcggtgcc gtgagcgggg cgccaaggat
      541 gttcgtgagc gtgcagacgc cgatggcccc gccgtccttc gcgcgcttga gctccgcgag
      601 cgcatcgtcc tcgtattgaa acggcagcga cgcgaaccag cggactcggc cgtcgtactt
      661 gcgctgtgcc gccgcgaaat cgtcgttgat gctgcgcgcg gccgctacgc tctgagcgcg
      721 cgtgccccaa tagacgttcg gcgcggtgag gctgatcagc cccacgtcga ccttcgcgtc
      781 gtccatgtcc ttgatgcgca agtcccaatc gagcatcggc ggcgtcatgc ggccgatgcc
      841 tccgccgcga tagatcaacg cgttgttctc gccgatgcgg aaattcgggt cggctgcgtc
      901 gttcacggcc ttgacccatc cctgcgagta catgtgcgtg tgcacatcga tgaccttggc
      961 tcgcgacgac tgcgccgtcg cgcggcccac caccgccgcc gcgacgccga ccgcgcccac
     1021 gccggccagc agctgtcttc gatcgatcgt catgtcgtgc cctcgcctct tttcgctggg
     1081 tgagtgtatc aaacgacccc gttgagatcg gtccgtcgcg agtgcggtgc ttctcgcgcg
     1141 cgagccgaga tgaagttggt cagatgacgg atcagcacga ggcgtgttcc atcacatgcg
     1201 cgcgcgccga gcctgcacgg cggccaactc gtcgggggta ttcacgttcg cgaacgactc
     1261 cggcggctcg aaaaatacct tacgcgcacc gagtcgctcg agcagttgcc acgtcggcgg
     1321 atgagcgccg ccggccaagg cgtcccgaac cgctggcagc gccgcgacgg gccacagcgc
     1381 gcagagcggt tggcggccgt cccgagtctc ggccattacc gcaccactgt cggcgcactc
     1441 gagcagacgc acgtagagat cgtcgggcaa cagtggcgca tcgcacgggc tcaccgccaa
     1501 catctgcgca ccctgtccct cggcccagac caacccaacc ttcacacctg cgagcggccc
     1561 gagcgcgtcg cctgcgtcgt cgttcagcgt cgggaacccg agcgctctcg ccacggcttc
     1621 tgcctccgtt cccggcctca cgttgatcgc gacgttcgca caaacggtgc gcagccgctg
     1681 cgccgcccac gcgagcagcg gccggtcgtc gagctgcgcg acggccttct caccgccgaa
     1741 ccgaacggac cgtccgcccg cgagcacgat gccgacgacc gtgccggcca cgctcatggc
     1801 ggataagggc gtgcgagctc gtcgacgaga tcggcgatcg cttcgatgtc gttcagatcc
     1861 gccgaaggca gcggtacctt cgcggtcagg ttgctcgcaa tcgcgacgat gtttggatcc
     1921 tgcggataca gtaacggttt gccggcttcg ctgcgatgca cttcgagctt cgcgtgagtg
     1981 tcagtcttga acccctcgac gatcacgaga tccacgggcg agaggtgcgg aatcaactcc
     2041 cgcagcgtcg gctcggcttc gtcgcgtagc tcgtgcatca gcgcccagcg ccgcgcgctc
     2101 gaaacgagca cctcgtacgc gccggcgaga cgatgagtgt gcgagtcctt acccggctga
     2161 tccacgtcga acgcgtggtg cgcgtgcttc agcgtagaca cactgcggcc gcgcgcaatc
     2221 agcaccggca gcagcttcgc gagcaacgtc gttttgccgc tgccgctcca gcccgcgagg
     2281 ccgatcagcc gcacggtcag cctgcggccg cagtcgcagt ctcgccggct cgttcgacgc
     2341 gcgctgcgca gtacttgaac tcggggattt tgccgaatgg gtcgagcttc ggattcgtga
     2401 gccgattcgc ggggctctct gcgaaacaga acggcatgaa gaccatgccc tccgctacct
     2461 cgcgatcggc gcgcaggatc gcttcgagca ctccgcgccg cgtctcgacc gagatcctgt
     2521 cgccttggtg cagcccgcgt ttctgcatgt ccctcggatt catcgcagcg atgccgactg
     2581 gctcgatcgc atcgagcacg ccggcgcgac gcgtcatcga gcccgtgtgc cagtgctcga
     2641 gcaggcgccc cgtcgtgagc acgagcgggt actcctcatc cgggagctcg tcgggcggca
     2701 agagatccgc cggcacgatc ttgccgcggc cgtcggccg
//
LOCUS       DATCUD010000084         1848 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71845, whole genome shotgun sequence.
ACCESSION   DATCUD010000084 DATCUD010000000
VERSION     DATCUD010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71845"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="VIQ99_01230"
     CDS             complement(<1..923)
                     /locus_tag="VIQ99_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011565416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9181788.1"
                     /translation="MSTQPLAADTRADIGRATLARVGRRLLPFLLLLYVVAWLDRVNI
                     GFAALQMNADLNFSAAVYGFGASIFFIGYALFEVPSNLILVRVGARLWIARIMITWGI
                     VSVAMMFVQGPISFYLLRFLLGVAEAGFLPGIIYYLGQWYPAADRARAVSWFMLAIPL
                     STVIGGPLAGVLLELDGWHGLHGWQWLFLLEGLPAIVLGFVVLGYLTDKPEHAEWLDA
                     DQRQWLAQRIASEHRVAHERHGVGLRAAFVHPTVWLLGLILFACQTGSYGLTLWIPQI
                     VRGLSGYSDFTVSMISALPYVAAAIGMVAIGA"
     gene            1022..1765
                     /locus_tag="VIQ99_01235"
     CDS             1022..1765
                     /locus_tag="VIQ99_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014401933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="queuosine precursor transporter"
                     /protein_id="HEY9181789.1"
                     /translation="MLAVTAPDSNRSPEGHYRYYDLVLAGFVAVLLCSNLIGTAKVSE
                     LTLPIVGGVFVFGVGNIFFPISYIFGDVLTEVYGYARARRVIWAGFITMVFASVMAWV
                     VVHLPASPTESFNATLQPAIEVVFGNTWRIAVASIVAFWVGDFVNAYVLARMKVLTQG
                     RWLWTRTIGSTIVGQGVDSLIFYPLAFAGIWEGETLFAVIAFNWFFKVMVEVVMTPAT
                     YLAVGWLKRHEHVDYYDTNTDFTPFSLKD"
BASE COUNT          344 a          582 c          608 g          314 t
ORIGIN      
        1 gcgccgatcg cgaccatgcc gatcgccgcc gcgacgtagg gcagcgccga gatcatgctg
       61 acggtgaagt cgctgtaccc ggagagcccg cgcacgatct gcggaatcca cagagtgagc
      121 ccgtagctgc cggtttggca cgcgaacagg atcaacccga gtagccacac ggtcggatgc
      181 acgaacgccg ctcgaaggcc gacgccgtgg cgttcatgcg cgacgcggtg ctcgctcgca
      241 atccgttgtg cgagccactg tcgctggtcg gcgtcgagcc actcggcgtg ctccggtttg
      301 tcggtgaggt agccgagcac cacgaagccg agcacgatgg ctggcagacc ttcgagcaag
      361 aacaaccact gccaaccgtg cagcccgtgc cagccgtcga gctcgagcag cacgccggcg
      421 agcggcccgc cgatcacggt cgacagcggg atcgcgagca tgaaccacga gacggcgcgc
      481 gcgcggtcgg ccgccggata ccattgaccc aggtagtaaa tgatgccggg caggaagccg
      541 gcctcggcga cgccgagcag gaaccgcagc aagtagaagc tgatcggccc ctgcacgaac
      601 atcatcgcga ccgacacgat gccccacgtg atcatgatcc gcgcgatcca gaggcgcgcg
      661 ccgacgcgca cgaggatcag gttgctcggg acctcgaaca gcgcgtagcc gatgaagaag
      721 atgctggcgc cgaagccgta gacggcagcg ctgaaattca gatccgcgtt catctgcaac
      781 gcggcgaacc cgatattcac gcggtcgagc catgcgacga cgtagagcag aagcaggaac
      841 ggcagcagcc gccggccgac cctcgctagc gtggcccgac cgatatcggc ccgtgtgtcg
      901 gcggcgagtg gctgcgtgct cacccgatgt gctccgtgaa ttcgagacgc gcatcctaag
      961 gccgcgagcc gagagaaagc gaggtgcgca cgtcgtgcta aggtggactc aaatcactct
     1021 gatgctcgcc gtgaccgccc cggatagcaa tcgcagtccc gaaggccact atcgctacta
     1081 cgacctcgtg ctcgcgggat tcgtggccgt gctgctgtgc tcgaacctga taggcacggc
     1141 gaaggtctcg gagctgaccc taccgatcgt cggtggcgtg ttcgtgttcg gcgtcggcaa
     1201 catctttttt ccgatcagct acatcttcgg cgacgtgctg accgaggtgt acggctacgc
     1261 gcgtgcgcgg cgcgtgatct gggccggatt catcacgatg gtattcgcga gcgtgatggc
     1321 gtgggtcgtc gtgcacttgc cggcctcgcc caccgagtcg ttcaacgcga cgctacagcc
     1381 ggcgatcgag gtcgtgttcg gcaacacgtg gcgaatcgcg gtcgcctcga tcgtcgcgtt
     1441 ttgggtcggt gacttcgtga acgcttatgt gctcgcgcgc atgaaagtgc tgacccaggg
     1501 gcgctggctc tggacgcgca cgatcggctc tacgatcgtc gggcaaggcg tcgacagcct
     1561 gatcttctat ccgctcgcgt ttgcgggcat ctgggaaggc gagaccctgt tcgcggtgat
     1621 cgcattcaac tggttcttca aggtcatggt cgaggtcgtg atgacgcctg cgacctatct
     1681 cgccgtcggc tggctgaagc gccacgagca cgtcgactac tacgacacga acaccgattt
     1741 cacgccgttc tcgctgaaag actagatggc cgttgcgccg gcggcgggct tcggggatga
     1801 tcgccggcct tcatcgaacc ggaaacttgg ggtgagccca tgagcgac
//
LOCUS       DATCUD010000085         2462 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79003, whole genome shotgun sequence.
ACCESSION   DATCUD010000085 DATCUD010000000
VERSION     DATCUD010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79003"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2462
                     /locus_tag="VIQ99_01240"
     CDS             <1..>2462
                     /locus_tag="VIQ99_01240"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9181790.1"
                     /translation="RQGTNLSVALAPHGQTLVVDLLGQLWSLPVTGGGAVPLTPAGSE
                     ARNPRFSPDGGRVVYQKWNDGQWDLSLLDVATGMEQPLTATPYDEREPDFTPDGRSVV
                     FAANRDGHFALWSLAIDGGAPIALTDTRGDSAFPTVSDQGHVAYVHLQDGEWSIRVRD
                     PSGAVTAVHTSRERLSAPTWRPGGGVLVFGERDSTRSSRLQMLLLAEPRVMKPLSGSE
                     DLFVARAAWVSAAEFIYGADGQLWRREVATPVRRPIHLFAASTVEVATTPTDLPRLDA
                     PGERIARGINGLVRSPNGRSTAFTALGDVWLAERGPPQRLTDDVFVDLDPEFWPDGES
                     IVFSSERTGQFELWRISLQDDHRLTQLTFGALQPRHPTVSGDGRRIAYLERTTLEPWA
                     PTILKVRDTSNGGETIVARDLIAPAPPEWSEDGLVLRVRARSATLVNGAARPFTAELR
                     TTDNAESDVGEPQTLAWTVPAPPADYVVQIGRLFDGVQGTYRRHVDLHVRAGRIAAIV
                     GRGVLPAVGEIVDARDATVIPGLIDLHAHSSSLTGERLGRAWLAYGVTTVREIAPNPL
                     EALERAELWASERAPGPRLWITPASGSASMGEETPIRTYPGIAAGFAHGLQSQATVIG
                     IAGFGSPSLPARLTDMVARSTPELPLSPGLSAYQDGIGRLTAADMTFVPGLAALAGLA
                     HRPALRRDSAYGALFTPVEQAAWSRPDDAGAAVPVLAETVARLVRAGGRVAVGSDAPA
                     VPQGLGLHLELALLAEAGLPNDQILRMATIQGALALGLERDLGTLDEGKLADFVVLEG
                     DPLAEIDETLTIVAVVKGGVWR"
BASE COUNT          373 a          841 c          844 g          404 t
ORIGIN      
        1 ccgccaggga acgaatcttt cggtcgcgct cgcgccgcac ggccaaacgc tcgtcgtcga
       61 tctgctcggc cagctgtgga gcttgccggt tacgggcggc ggcgccgtgc ctcttacacc
      121 tgccggttcc gaggcccgca atccgcgatt cagcccggac ggcggccgcg tcgtctatca
      181 gaagtggaac gatggtcagt gggacctttc gctgctcgac gtcgcgaccg gcatggagca
      241 gccgctgacc gctacgcctt acgacgagcg cgagcctgat ttcacgcctg acggccgctc
      301 ggtcgtgttc gcggccaatc gcgacggaca cttcgcgttg tggtcgctcg cgatcgacgg
      361 cggcgctcca atagcgctga ccgacacacg cggcgattcg gcgtttccga ccgtgtccga
      421 ccagggccac gtcgcgtatg tccacttgca ggacggcgag tggtcgatac gcgtgcgtga
      481 cccgagcggc gctgtgacgg ccgtgcacac gagcagggag cggctatcgg cgccgacttg
      541 gcgaccgggt gggggcgtcc tcgtgttcgg cgagcgggac tctacgcgct cgagccgcct
      601 gcagatgctg ctcctggccg agccgcgcgt catgaagccg ttgagcggca gcgaagacct
      661 gttcgtcgcg cgcgcggcgt gggtgtcggc cgccgagttc atctatgggg cggacgggca
      721 actttggcgc cgcgaagtcg cgactccggt ccgccgaccg attcaccttt tcgcggcctc
      781 cacggtggag gtcgcgacga cgcccacgga cctgccgcgt ttggacgcgc cgggcgagcg
      841 cattgctcgc ggcatcaacg gcctcgttcg ttcgccgaac gggcggagca ccgcattcac
      901 ggcgctcggc gacgtgtggc tcgcggaacg cgggccaccg cagcgactga ccgacgacgt
      961 attcgtcgat ttggacccag aattttggcc cgatggcgag tcaatcgtgt tcagcagcga
     1021 gcgcacggga caattcgagc tgtggcgaat ctcgctgcaa gacgaccatc gactcaccca
     1081 gcttacgttc ggcgctttac aaccgcgcca tccgaccgtc tcgggcgacg gccggcgcat
     1141 cgcgtactta gagcgcacga cgctcgagcc gtgggcgccg acgattttga aggtgcgcga
     1201 cacatcgaac ggcggcgaaa ccatcgtcgc gcgggacttg atcgcgcccg caccgcccga
     1261 gtggtcggag gacggtctgg tgcttcgcgt acgcgcccgc tctgccacgc tcgtgaacgg
     1321 cgcggcgcgg ccattcacgg cagagcttcg aaccaccgac aacgccgaga gcgacgtcgg
     1381 cgaaccgcag acgctcgctt ggactgtgcc cgcgccgcca gccgactacg tcgtgcaaat
     1441 cggccgcttg ttcgacggtg tccagggaac gtaccggcgc cacgtcgact tgcacgtgcg
     1501 tgccggtcgc atcgcggcca tcgtcggtcg cggagttctg ccagcagtag gggagatcgt
     1561 cgatgcacgc gacgccaccg tgattccggg cctcatcgac ttgcacgctc actcgagctc
     1621 gctgaccggc gagcggctcg gacgcgcttg gctcgcctac ggggttacga cggtccgaga
     1681 gatcgcgccg aacccgctcg aagcattgga acgcgccgaa ctgtgggcca gcgagcgcgc
     1741 accgggaccg cgactatgga tcacacccgc gtcgggctcg gcatccatgg gcgaggagac
     1801 cccgatccgg acctatcccg gaatcgccgc cggttttgcg cacggcctgc aaagccaggc
     1861 aacggtcatc gggatcgccg gtttcggttc tccgtcgttg ccggcacgac tcaccgacat
     1921 ggtcgcgagg tcgaccccgg agcttccgct ttcacccggc ctctcggcct accaagacgg
     1981 catcggccga ctgaccgcag ccgatatgac gttcgtgccc gggcttgccg cgctcgcggg
     2041 cctggcccac agaccggccc tccgccgcga ctcagcatac ggcgcgctgt tcacgccggt
     2101 cgagcaagcc gcctggtcgc gcccggacga tgccggcgcc gccgtacccg tgcttgcgga
     2161 gaccgtcgct cggctggtgc gcgcgggcgg ccgggtcgcc gtggggtccg acgccccggc
     2221 tgttccgcag ggccttgggc tccatctcga gcttgcccta ctcgcagaag caggccttcc
     2281 gaacgaccag atcctgcgaa tggcgacgat ccagggggcc ttggcgctgg gcctcgagcg
     2341 ggacttggga acgctcgacg aggggaagct cgcggatttc gtggttctcg aaggcgatcc
     2401 gttggccgag atcgacgaga cgttgacgat cgtggccgtc gtcaaaggcg gggtgtggcg
     2461 gg
//
LOCUS       DATCUD010000086         2407 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15095, whole genome shotgun sequence.
ACCESSION   DATCUD010000086 DATCUD010000000
VERSION     DATCUD010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15095"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2140
                     /locus_tag="VIQ99_01245"
     CDS             <1..2140
                     /locus_tag="VIQ99_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEY9181791.1"
                     /translation="FASLWWLLAIGLSATAARAQDLTLEAIDVQALPGQVVELRLRLS
                     GAAPEPQSFTIDDPARISLDLPNTSLGLDERRREANVGALTSILAAEANGRTRIVMNL
                     SSMVPYETRVEGDSVYVRIGQGPGAASASVAAQPRQGGAPSPAARAATGDRSIQAIDF
                     RRGTDGAGQVIVDLNDPRTTVDVRQEGGRIIVDFQDTALPDELLRRLDVTDFATPVFT
                     VDALRSNRDARLVVTAAADYEQLAYQTDNQFTLELKPQARQAQQAGLTPDAFDQNREY
                     TGERLTLNFQDLETRAVLQLIADFSGLNIVVSDTVQGSVTLRLQNVPWDQALDIVMTT
                     KGLDMRRNGNTMIVMPAEEIAAREQAELEAFQSLQELEPLRSEFIQVNYAKAAELADL
                     VRGEGSNSLLSERGSVAIDERTNTLLVSDVSSSLANVRRLVTTLDIPVRQVLIESRVV
                     IVNDDYSRDLGVRFGMTTANDNDGNGLIGVTGTAAGAGLMVGTPPIGGVGGPATPVPA
                     PALPTRYNVNLPIASPAGSIALAILGNDYLVDLELSALQAEGDGRVVSTPRIVATNQR
                     EARILQGTEIPYQEASSSGATTTSFKEAVLSLTVVPQITPDDRIIMDLTITKDSVGEV
                     VSSGNAGGFIPSIDTRELVTQVVVNDGETVVLGGIYETELRNETRKVPGLGTLPGIGY
                     LFRSKSTENNNAELLIFVTPKILRDGSRID"
     gene            2217..>2407
                     /locus_tag="VIQ99_01250"
     CDS             2217..>2407
                     /locus_tag="VIQ99_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004994368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEY9181792.1"
                     /translation="MLGRPNVYLIGPMGSGKTAVGRRLAALLGKEFFDSDAEIEKRTG
                     VDVRYIFEKEGEVRFRERER"
BASE COUNT          431 a          793 c          792 g          391 t
ORIGIN      
        1 cttcgcgagc ctatggtggc ttctcgcgat cggcctgtcg gccactgcgg cccgcgccca
       61 ggacctgacc ctggaagcga tcgacgtcca agccttgccg ggccaagtcg tcgagctgcg
      121 gttgcgactg agcggcgccg caccggagcc ccagagcttc acgatcgacg atccggcgag
      181 aatctcactc gatctgccga acacgtcgct cgggctggac gagcgtcgtc gtgaggccaa
      241 cgtcggcgca ttgacctcga ttctggcggc cgaagcgaac ggccgcacgc gcatcgtgat
      301 gaacctgagc tccatggtgc cgtacgaaac gcgcgtcgaa ggcgacagcg tgtacgtgcg
      361 gatcggccag ggcccgggtg ccgcgtcggc gtcggttgcg gcgcaaccgc gtcagggcgg
      421 cgctccgtcg ccggctgctc gcgccgcaac cggagatcgt tcgattcagg ccatcgactt
      481 ccgccgcggc acggatggcg ccggccaagt catcgtcgat ctgaacgatc cccgtacgac
      541 cgtcgacgtt cgccaggagg gcggccgcat catcgtcgat ttccaagata cggcgttgcc
      601 ggacgagctg ttgcggcgcc tcgatgtcac ggacttcgcg acgcccgtgt tcacggtcga
      661 cgcgctgcgt tccaatcgcg atgcccgcct cgtcgtcacg gctgcggccg actacgagca
      721 gctcgcgtac caaaccgaca atcagttcac gctcgagctg aagccgcagg cgcggcaggc
      781 tcagcaggct ggcctgacgc cggacgcgtt cgatcagaac cgcgagtaca cgggtgagcg
      841 cctcacgctg aacttccagg atctcgagac gcgagccgtg ttgcagctga tcgcggattt
      901 cagcggcctc aacatcgtcg tcagcgacac ggtgcagggc agcgtgacgc tgcggctgca
      961 aaacgtgccg tgggatcagg ccctcgacat cgtcatgacc acgaagggcc tcgacatgcg
     1021 ccgcaacggc aacacgatga tcgtgatgcc ggcagaggag atcgcagcgc gcgagcaggc
     1081 cgagctcgag gcgttccagt ccctgcaaga gctcgagccg ctgcgctccg agttcattca
     1141 agtcaactac gccaaggccg cggagctcgc tgacctcgtg cgcggcgagg gctcgaactc
     1201 gttgttgtcc gaacgcggta gcgtcgcgat cgacgagcgc acaaatacgc tgctcgtcag
     1261 cgacgtgtcg tcgagcttgg ccaacgtgcg ccgcctcgtg acgacgctcg acattccggt
     1321 acgccaagtg ctgatcgaga gccgcgtcgt gatcgtgaac gacgactaca gccgcgacct
     1381 cggcgtccgt ttcggcatga cgaccgcgaa cgacaacgac ggcaacggtc tgatcggcgt
     1441 cacgggcact gccgcgggcg ccggcttgat ggttggcacg ccgccgatcg gcggagtcgg
     1501 cggaccggcg accccggtgc cggcgcctgc actgccgacg cgctacaacg tgaacctccc
     1561 tatagcgagc ccggccggct cgatcgcgct cgcgatcttg ggtaacgact acctcgtcga
     1621 cctcgagctc tcggcgttgc aggccgaagg cgatggccgc gtcgtgtcga cgccgcgcat
     1681 cgtcgcgacg aaccagcgcg aggcgcgcat cctccagggt acggagatcc cgtatcaaga
     1741 ggcttcgtcg agcggcgcca cgacgacctc gttcaaggag gccgtgttga gcctcacggt
     1801 cgtgccgcaa atcacgcccg acgatcggat catcatggac ctgaccatca cgaaggactc
     1861 ggtcggcgaa gttgtgtcga gcggcaacgc gggcggcttc atcccgagca tcgacacgcg
     1921 tgagctcgtg acgcaagtgg tcgtgaacga cggcgagacc gtcgtgctcg gcggtatcta
     1981 cgagaccgag ctccgcaacg agaccaggaa ggtcccgggc ctcggcacgc tgcccggcat
     2041 cggctacctg ttccggagca aatcgaccga gaacaacaac gccgagctcc tgatcttcgt
     2101 gacgccgaag atcctgcgcg acggttcccg catcgactag actcgagcgt cgactcgaaa
     2161 gcacgcgacg gccgcccttg ggcggccgtt tcgtttcttg agtatcctat cgagccatgc
     2221 tcggccggcc taacgtttat ctgatcggac cgatggggtc cggcaagacc gctgtcggcc
     2281 gtcggcttgc ggcgctgctc ggcaaagaat ttttcgacag cgacgcggag atcgagaagc
     2341 ggacgggcgt cgatgtccgt tacatcttcg agaaggaagg cgaggtcagg tttcgcgagc
     2401 gggagcg
//
LOCUS       DATCUD010000087         2349 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50598, whole genome shotgun sequence.
ACCESSION   DATCUD010000087 DATCUD010000000
VERSION     DATCUD010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2349
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50598"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1022)
                     /locus_tag="VIQ99_01255"
     CDS             complement(<1..1022)
                     /locus_tag="VIQ99_01255"
                     /inference="COORDINATES: protein motif:HMM:NF017870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HEY9181793.1"
                     /translation="MNKLAVAAVAALVLVVLLGLPAVVGAMTEARVNERVAAIDESGT
                     SAAQITSFDRGWFRSTARIELNVTPDAGQLGNLPPGVTMPNTVPTIPIAVEFAHGPIA
                     VLDGVHFGWSKWVARLDTEAPGVTELQQTLGVPYVFEFRGRTGYGGNLAFDGDAPAFE
                     LPIDDALVTFSGATFDGTFDGRRDLTARFHVPAVDFTSPTGTFLVTDLRASADNEIRS
                     RYVTPGEATFSIERIAISDAFQGGMPVFEAENLEISSEATLDADEILLDMRVVYALDS
                     MRISESEVTAAAIEMSLQNLDAAALDAYGAATADVTNTVDPLTTLGPHLERALKAGPS
                     LALDPIR"
     gene            1137..1730
                     /locus_tag="VIQ99_01260"
     CDS             1137..1730
                     /locus_tag="VIQ99_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015345884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding negative transcriptional regulator"
                     /protein_id="HEY9181794.1"
                     /translation="MYTPKHFEVTSPETLAAFVDAHAFGTLITAPEGRPFASHVPFLL
                     DSEHAVLHCHLARANPQWQQLAAAPEVLVIFLGPHGYVSPTWYTDPGVPTWNYTAVHV
                     CGAARVVDDPKHTARHVEALAEKFERGSASPWVPDYDPRRLGGIVGIEVRVRSIEGKF
                     KLSQNRSAADRHGVIAKLRASGRERDAELAGLMDAPP"
     gene            1783..>2349
                     /locus_tag="VIQ99_01265"
     CDS             1783..>2349
                     /locus_tag="VIQ99_01265"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9181795.1"
                     /translation="MRTSTRIAFVGASAWAAVTWHLGEAQPTAGEDSQQILTVDHYVP
                     NVSIVPAIDGQIVQLYVRERVKPATVQRGAPHDDRVVLFVHGAGTPAEVAFDVPVRDY
                     SWMAYLAAAGFDVFSMDVTGYGRSTRPHVMNDVCNLSAEQQAALGRTPCKATHTAQLT
                     TIASDWDDIDAVVDYIRDLRDVPRVSLVA"
BASE COUNT          387 a          775 c          808 g          379 t
ORIGIN      
        1 cgaatcggat ccaacgccaa ggacggcccc gccttcagcg cacgctcgag atgcgggccg
       61 agagtggtca gcgggtcgac cgtgttggtc acgtcggcag tcgcggcgcc gtacgcgtcg
      121 agcgcggcgg cgtcgagatt ctgcaggctc atctcgatcg cggcagccgt gacctcgctc
      181 tcggagatgc gcatggagtc gagagcgtag acgacgcgca tgtcgagcaa gatttcatcg
      241 gcgtcgagcg ttgcttcgct cgagatctcg aggttctccg cctcgaaaac cggcattcca
      301 ccttgaaacg cgtcgctgat cgcgatgcgc tcgatcgaga acgtcgcttc gcccggcgtc
      361 acatatcgag accgaatctc gttgtcggcg cttgcgcgga ggtcggtgac gaggaacgtg
      421 cccgtcggcg aggtgaagtc gacggccggg acgtgaaacc gagccgtgag gtcgcgtctg
      481 ccatcgaagg tgccgtcgaa cgtcgcgccc gagaacgtca cgagcgcgtc gtcgatcggc
      541 agctcgaacg ccggcgcgtc gccgtcgaac gcgaggttgc caccgtagcc ggtgcggccg
      601 cgaaactcga acacgtacgg cacgcccaag gtctgctgca gctcggtaac acccggcgcc
      661 tcggtgtcga ggcgtgcaac ccatttcgac cagccgaagt gcactccgtc cagcacggcg
      721 atcggaccat gcgcgaattc cacggcgatc ggaatcgtgg gcacggtgtt cggcatcgtg
      781 acgcccggcg ggaggttgcc gagctgaccc gcgtccgggg tgacgttgag ctcgattctc
      841 gccgtgctgc ggaaccaccc gcggtcgaag gacgtgattt gtgcggccga ggtgccgctc
      901 tcgtcgatcg ctgcgacgcg ctcattcacg cgtgcttcgg tcatcgcacc gacgacggcc
      961 ggcaacccga gcagcactac gaggaccaat gccgcgactg cggcgacggc gagcttgttc
     1021 atggagcggt cctgcggcgg gaatggtggg gcggttcgga tcatcgcgaa cggcctcgcg
     1081 gcggtcaacc cgaaggcgtc gcgctatgat cgagcctcgg ttcctctgga gaacgcatgt
     1141 acaccccaaa gcacttcgag gtgacgtccc ccgaaacgct ggcggcgttc gtcgatgcgc
     1201 acgcgttcgg cacgttgatc acagcgcccg agggccgacc gttcgcgagc cacgtgccgt
     1261 tcctgctcga tagcgagcac gccgtcttgc actgccatct cgcgcgcgcg aatccgcagt
     1321 ggcagcagct tgcggccgcg ccggaggtgc tcgtgatctt cttggggccg cacggttacg
     1381 tttcgccgac gtggtacacg gaccccggcg tgccgacctg gaactacact gccgtccacg
     1441 tctgcggcgc cgcacgggtc gtcgacgatc ccaagcacac ggcccgccac gtcgaggcgt
     1501 tggcggagaa gttcgagcgc ggcagcgcct ctccatgggt acccgactac gatccgcgta
     1561 ggctcggcgg catcgtcggc atcgaggtcc gggttcgctc gatcgaaggc aagttcaagc
     1621 tgagccagaa ccgctctgcg gccgaccgcc acggcgtgat cgccaagctg cgcgcgagcg
     1681 ggcgcgagcg agacgcggag ctcgcggggc tcatggacgc cccgccctag gcgggcccgc
     1741 gcaaagctgc cacgattcga ccggtcgact ggaggggaat tcatgcgcac gagcactcgg
     1801 atcgcgttcg tcggggcgag cgcgtgggcc gccgtcactt ggcatctcgg ggaagcgcag
     1861 ccgacggcgg gcgaggacag tcagcagatt ctgaccgtcg accactatgt gccgaacgtc
     1921 tcgatcgttc ccgcgatcga cgggcagatc gtgcagctct acgtgcgcga gcgcgtgaag
     1981 ccggcgacgg tgcagcgcgg cgcgccgcac gatgatcgcg tcgtgctgtt cgtgcacggc
     2041 gcaggcacac cagccgaagt cgcgttcgac gtgccggtca gggactacag ttggatggcc
     2101 tacctcgcgg ccgccggctt cgatgtgttc tcgatggacg tgaccggtta cggccgctcg
     2161 acgcggccgc acgtaatgaa cgacgtctgc aatctctcgg ctgagcagca ggcggcgctc
     2221 gggcgcacgc cgtgcaaggc cacgcacacg gcgcagctga cgacgatcgc ttccgactgg
     2281 gacgacatcg atgccgtggt cgactacatc cgcgacctgc gcgacgtgcc gcgcgtgagc
     2341 ctcgtcgct
//
LOCUS       DATCUD010000088         2446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8005, whole genome shotgun sequence.
ACCESSION   DATCUD010000088 DATCUD010000000
VERSION     DATCUD010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8005"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1209
                     /locus_tag="VIQ99_01270"
     CDS             <1..1209
                     /locus_tag="VIQ99_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEY9181796.1"
                     /translation="LLLNFTWWVNRKDRNGNNVFEGGFLGLDNIGVFDRSSPLPTGGY
                     LEQADGTAWMALFCQNMLEIAAELALHRPNYVPMAHKFLQHFLWIASAMSHAGDDVGM
                     WDEEDGFFYDVLRLPDGRAERLKVRSMVGLLPLCAVTVFDGELLRKYPDLQAEVETSL
                     ADRRELLRLIHDPTKLGYADRRLLAVLDERRLRRVLAKMLDEKEFLSPYGLRSLSRYH
                     EEHPFKINVGSQVYSVPYLPSESDTGMFGGNSNWRGPIWMPVNALIIRALLQYYSYYG
                     DAFTVECPTGSGRQMTLYQVAEEIGRRLGNIFLRNERGERPVYGGARRFQDDPHWRDL
                     ILFYEYFHGDNGAGLGASHQTGWTGVIARIQHLFATGSAELVRDLGKEAVMRTSARDS
                     RGDREAAARP"
     gene            1260..1742
                     /locus_tag="VIQ99_01275"
     CDS             1260..1742
                     /locus_tag="VIQ99_01275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181797.1"
                     /translation="MRFHRAATVIGLGLTMLGAARAGAQDLEVSSMDVLRTQLGVDKR
                     VVVEENLILTESAAAAFWPIYEEYQRELLSIDERVVRLVNEYVAAYGNDSITDATAKR
                     LLDEALALDEAEIALRKRYAARLIQVIPAIEAARYLQIERKIRAVVEFDLADRIPLIE
                     "
     gene            complement(1933..>2446)
                     /locus_tag="VIQ99_01280"
     CDS             complement(1933..>2446)
                     /locus_tag="VIQ99_01280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181798.1"
                     /translation="PRNGRLSQSYYRGRQSLGRLYSYAAATASPTPRLADTIVQMADW
                     ELLYAHYGQAVELYAHAYAMLEEGAAAREPIEQLFAPPTPVVLPAFQPNPLAADDARE
                     PKGHIDVEFEITRYGRARRIEILGAENAGDADIARLDKLVAASRFRPRLTESGSPDAA
                     PVVVRYYLYD"
BASE COUNT          428 a          752 c          832 g          434 t
ORIGIN      
        1 ctgctgctca acttcacttg gtgggtcaac cgcaaggacc ggaacggcaa caacgtgttc
       61 gaaggcggct ttctcggcct cgacaacatc ggcgtcttcg accggagctc accgctgccg
      121 accggcggct atctcgagca ggccgacggc acggcatgga tggcgttgtt ctgccagaac
      181 atgctcgaga tcgccgccga gctggcgctg cacagaccga actacgtgcc gatggcgcac
      241 aagttcctgc agcacttcct gtggatcgca tccgcgatga gtcacgcggg cgacgacgtc
      301 ggaatgtggg acgaggagga cggctttttc tacgatgtgc tgcggctacc ggacggccga
      361 gccgaacggc tgaaagtgcg gtcgatggtg ggattgctgc cgctatgcgc cgtaaccgtg
      421 ttcgatggcg agctgctccg gaagtacccc gaccttcaag ctgaggtcga gacctcgctt
      481 gccgatcgca gggagctgct gaggctgatc cacgacccca ccaagctcgg ttacgcggac
      541 cgcaggctcc tcgcggtgtt ggatgagcgc cggctgcggc gcgttcttgc gaagatgctc
      601 gatgagaagg agttcttgag cccttacggg ctccgctcgt tgtcgcggta tcacgaagag
      661 cacccgttca agatcaacgt cggatcccag gtctatagcg ttccgtactt gccaagcgag
      721 tcggacaccg gaatgttcgg cggaaactcg aactggcgcg ggccgatctg gatgcccgtg
      781 aacgcactca tcatccgcgc gctgctgcag tactactcgt actacgggga cgctttcacg
      841 gtggagtgtc ccacgggatc cggccgacaa atgacgttgt atcaagttgc ggaagagatc
      901 gggcgtcgcc tcggcaacat cttcctgcgg aatgagcgtg gcgaacgtcc cgtctacggc
      961 ggcgcgcgcc gattccagga cgatccccat tggcgcgacc tgatcctatt ctatgagtac
     1021 ttccacggcg acaacggcgc gggcttgggc gcgagccacc agacgggttg gacgggagtc
     1081 atcgcccgga tccaacatct gttcgcgaca ggctcggcag agctcgtgcg cgatctcggc
     1141 aaggaagccg tcatgagaac gagcgcgcgg gactcgcgcg gtgaccggga agcagcggcg
     1201 cgcccctgag cgcgcgtgct tacatggcga ctgtgtccga cgtcgacagg aggaaaacca
     1261 tgagatttca tcgagcggcg accgtgatcg gtctcggctt gacgatgctc ggcgcagctc
     1321 gcgccggcgc ccaggatctc gaagtgagta gcatggacgt actgcgcacg cagctcggcg
     1381 tcgataaacg tgtcgtggtc gaggagaacc tcatcctcac ggagtctgct gctgcggcgt
     1441 tctggccgat ttacgaggag taccagcggg agctgctatc gatcgacgaa cgcgtcgtgc
     1501 ggctcgtcaa tgagtacgtc gcggcttacg gcaacgactc gatcacggac gcgacggcca
     1561 agcggctact ggacgaagcg ttggctctcg acgaggcgga gatcgcgctg cgcaagcgtt
     1621 acgcggcgcg gctcatacaa gtcattccgg ccatcgaagc cgcgcgctat ctgcagatcg
     1681 agcgcaagat tcgcgccgtc gtcgagttcg atctggcgga tcggattccg ttgatcgagt
     1741 gactcgacgc cgacacctgc gtctacgcgt tgaagcgacg atggccaagg gactcaggcg
     1801 tcgggctgac ggcgaacttg cgcgagcagg gccgcgccgc cggccgtgag cgatacggta
     1861 ttggtcgccg catcgacgat gtggatcgcg cgcggagcag cgcgcagtgt cggcgcccgc
     1921 cgctcagcga gcctagtcgt acaggtaata gcgtacgacg acgggcgcgg cgtcgggtga
     1981 cccgctctcg gtcagacgag gccggaaccg gctggccgcg acgagcttgt cgaggcgcgc
     2041 gatgtcggca tcgcccgcgt tctccgcgcc gaggatttcg atgcggcgtg cgcgtccgta
     2101 cctcgtgatc tcgaactcga cgtcgatgtg tcccttgggc tcgcgcgcgt cgtcggcggc
     2161 cagcggattc ggctgaaacg ccggcagcac gacgggtgtc ggtggcgcga acagctgctc
     2221 gatcggctcg cgcgcggcgg cgccttcctc gagcatcgca tacgcgtggg catagagctc
     2281 gacggcttgg ccgtagtgtg cgtacagcag ctcccagtcc gccatttgca cgatcgtgtc
     2341 cgcgagtcgc ggcgtcgggc tcgccgtggc ggcggcgtag ctatacaggc ggccaagact
     2401 ctgccggccg cggtagtacg actgactcag gcgcccgttg cgcggc
//
LOCUS       DATCUD010000089         3446 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_100290, whole genome shotgun sequence.
ACCESSION   DATCUD010000089 DATCUD010000000
VERSION     DATCUD010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3446)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3446)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3446
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100290"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /gene="mutL"
                     /locus_tag="VIQ99_01285"
     CDS             <1..627
                     /gene="mutL"
                     /locus_tag="VIQ99_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460896.1"
                     /note="This protein is involved in the repair of
                     mismatches in DNA. It is required for dam-dependent
                     methyl-directed DNA mismatch repair. Promotes the
                     formation of a stable complex between two or more
                     DNA-binding proteins in an ATP-dependent manner without
                     itself being part of a final effector complex; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HEY9181799.1"
                     /translation="RRAQPVAATAEDAESPPLGFALAQLAGVYVLAHNKAGLIIVDMH
                     AAHERITYERLKAALEAERLKAQPLLVPVTFEVSAREAELVEQHGDDLGRIGLDLGLR
                     GPRQIVVRSVPLLLDGADVEPLVRDILSDMSDGQATGRIDHAINEMLATMACHAAVRA
                     SRRLTIEEMNALLREMERTERSEACNHGRPTWTQVTLEDLDRLFLRGQ"
     gene            628..1569
                     /gene="miaA"
                     /locus_tag="VIQ99_01290"
     CDS             628..1569
                     /gene="miaA"
                     /locus_tag="VIQ99_01290"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: protein motif:HMM:TIGR00174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEY9181800.1"
                     /translation="MTEPQGRACLCITGATACGKTELALQLAERVPLEIVSMDSALVY
                     RELDIGTAKPSVEVRARVPHHLIDVVAPTESYSAGRFARDAAALIESIHARNRLPVLV
                     GGTLLYLRALRDGLARLPRADPRLRERIDREAQTYGWSALHERLRQLDPTAAARIAPS
                     DRQRIQRALEVHELTGQPITRLQRAERSSGVNVVSIALVPDSRVELAKRIERRFDSMV
                     EAGFVREVERLRARGDLSPDMPSMRAVGYRQIWAHLDGEYGWDEARTKAIVATRQYAK
                     RQLTWLRGDPRCEPWPAFTPGLVERLAARVAKEFSSR"
     gene            1729..1971
                     /gene="hfq"
                     /locus_tag="VIQ99_01295"
     CDS             1729..1971
                     /gene="hfq"
                     /locus_tag="VIQ99_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007022969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEY9181801.1"
                     /translation="MAKSQSLQDPFLNALRKEKVPVSIYLVNGIKLQGQIDSFDQFVV
                     LLRNSVSQMVYKHAISTVVPARNVRVPAMDEEEAED"
     gene            2001..3284
                     /gene="hflX"
                     /locus_tag="VIQ99_01300"
     CDS             2001..3284
                     /gene="hflX"
                     /locus_tag="VIQ99_01300"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018860596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome rescue GTPase HflX"
                     /protein_id="HEY9181802.1"
                     /translation="MLDRPRSGERALLLHIGLHRPCFDDETQEFRALAESAGARVVGE
                     IQARRDRPDPKYFVGSGKVDEIAARVRETDAELILVNQPLRAGQERNLELALKTRVLD
                     RNGLILDIFAQRAATFEGKLQVELAQHEHLASRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLVSRRIRHLRERLTRVERQREVSRKERVRADVPTVALVGYTNAGKTTLFNALA
                     GADLVAKDQLFATLDPTVRRLSLPGGGEALLVDTVGFVRDLPHELIAAFSATLTETRE
                     AALLLHVIDASDPHHEDRRRQVEAVLEGIGAAEVDCLRVYNKVDQAPPDFVREFDGAG
                     ITKHCVSAVTGEGLEALREAIRVRVAGARVAGELRLRPDQSRLRARLFGWHAVRGETV
                     EKDGGYTLAVDLPAQRWRQLRDEEGLSADSIRQKV"
     gene            3291..>3446
                     /locus_tag="VIQ99_01305"
     CDS             3291..>3446
                     /locus_tag="VIQ99_01305"
                     /inference="COORDINATES: protein motif:HMM:NF023642.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflK N-terminal
                     domain-containing protein"
                     /protein_id="HEY9181803.1"
                     /translation="MAWDDGDKGNPWRSDKDKGPADLDAVVRDLQRKLAGLFRGGGAG
                     RGGGGDQA"
BASE COUNT          609 a         1033 c         1223 g          581 t
ORIGIN      
        1 cgccgggcac agcctgtcgc ggcgaccgcc gaagacgccg agtcgccgcc gctcggtttc
       61 gcgttggcgc agcttgcagg ggtctatgtt ctcgcccaca acaaggccgg gctgatcata
      121 gtggacatgc acgcggcgca cgaacggatc acgtacgagc gtttgaaggc tgcactcgag
      181 gcggagcgtc tcaaggcgca gccgctgctc gtccccgtaa ccttcgaggt ttcggcgcgc
      241 gaggcggagc tcgtcgagca gcatggcgac gacctcggcc gaatcggctt ggatctcggt
      301 ctgcggggtc cgcgacagat cgtggtgcgg agcgttccct tgctgctcga tggcgccgac
      361 gtcgagccgc tggtgcggga catcctcagc gacatgagcg acgggcaggc cacgggtcgc
      421 atcgaccacg cgatcaacga gatgctcgcg acgatggcgt gccacgcggc cgtacgcgca
      481 agtcgccggt tgacgatcga agagatgaac gcgttgctgc gggagatgga acggaccgag
      541 cgtagcgaag cgtgcaatca cggtcgaccg acgtggactc aggtcaccct cgaggacctg
      601 gatcgcctct ttctgcgagg ccaatgagtg accgagccgc agggtcgcgc gtgcctgtgc
      661 atcaccggag ccacggcctg cggtaagact gagctcgcgc tccagctcgc cgagcgcgtg
      721 ccgctcgaaa tcgtgagcat ggattccgcg ctcgtctata gagagctcga catcggtact
      781 gcgaagccgt cggtcgaggt gcgcgcgcgc gtgccccacc atttgatcga tgtcgtagca
      841 ccgaccgagt cgtattccgc cgggcgtttc gcaagggatg cggctgccct gatcgagtct
      901 atccacgcgc gcaatcggtt gcctgtgctg gtcggcggaa cgctgttgta tctgcgcgcg
      961 ttgcgagacg gtcttgcgag gctgccacgc gccgatccgc gcttgcgcga gcgcatagac
     1021 cgcgaagcgc agacgtacgg atggagcgcg ctccacgagc ggctgcgaca gttggatccg
     1081 accgctgcgg cgcgcatcgc accgagcgac cgccaacgca ttcagcgggc gctcgaggtg
     1141 cacgagctca cggggcagcc aatcacgcga ttgcagcgcg cagagcgcag cagcggcgtg
     1201 aacgtcgtat cgatcgcgct cgtgcccgac agccgggtgg agttggcgaa gcgcatcgag
     1261 cggcgtttcg attccatggt cgaggcgggg ttcgttcggg aggtcgagcg gctgcgcgct
     1321 cgcggtgatc tgagccccga catgccgtcg atgcgcgccg tcggctatcg gcagatctgg
     1381 gcgcatctcg acggggagta cggctgggac gaagcgcgca cgaaagctat cgtcgcaacg
     1441 cgacagtacg ccaagcgcca gctcacgtgg ttgcggggcg atccgcgttg cgaaccctgg
     1501 ccggccttta cgcctgggct ggtcgagcga cttgccgcac gcgtggccaa agaatttagt
     1561 agccgctaaa aatacgcgcg ggctgtgcta gcattgccgt ttgtgggagt aaggccgttg
     1621 ctttgtgcaa cggcgatcgg agtccgagat tttcaggcag cgcgccgggc ccaagcgaca
     1681 cggtccgagc tgatctcgac gattcgaaca agaagaagga gagcagtcat ggccaagagt
     1741 cagtcgcttc aagatccgtt tttgaacgca ttgcgcaagg aaaaggtgcc cgtctcgatc
     1801 tacttggtga acggcatcaa gctgcaaggt caaatcgatt cgttcgatca attcgtcgtg
     1861 ctgttgcgca acagtgtgag ccagatggtg tacaaacacg cgatctccac cgtagtgccg
     1921 gctcgcaacg tgcgggtgcc ggcgatggac gaggaagagg cagaagactg aatgccgttc
     1981 cctgatacag ggaggtaacg ttgctcgatc gcccgcgcag cggtgaacgt gcgctgctac
     2041 tccacattgg ccttcatcgg ccctgtttcg acgacgagac tcaagagttc cgggccctgg
     2101 cggagtccgc cggcgcacgc gtcgtcgggg aaattcaggc acggcgggat cggccggatc
     2161 cgaagtattt cgtcggtagc ggcaaggtgg acgagattgc ggcgcgcgtg cgtgagaccg
     2221 acgcggagct gattctcgtg aaccagccct tgcgcgcggg ccaggaacgc aatctcgagc
     2281 ttgctctgaa aacgcgcgtg ctcgatcgca acggcctgat cctcgacatc ttcgcgcagc
     2341 gtgcggcgac cttcgaaggc aagctccagg tcgagctcgc tcagcacgag catctcgcgt
     2401 cgcgactcgt tcgcgggtgg acgcacctcg agcggcagaa aggcggcatc ggcctacgcg
     2461 gtcccggtga gacccagctc gagaccgatc ggcgcctcgt aagccggcgc attcggcact
     2521 tgcgtgagcg cttgactcgt gtcgagcggc aacgcgaggt cagccgtaag gagcgtgtac
     2581 gcgccgatgt cccgacggtc gcgctcgtcg gttatacgaa cgccggcaag acgacgctgt
     2641 tcaacgcgct ggcgggggcc gatctcgtgg cgaaggatca gctgttcgcg acgctcgatc
     2701 ccacggtgcg acggctttcg ttaccgggcg gcggcgaggc cttgctcgtg gacaccgtag
     2761 gcttcgtgcg cgatttgccg catgagctga tcgcggcgtt cagcgcgacg ctgacggaga
     2821 cccgcgaggc ggctctgctc ctgcacgtga tcgatgccag cgacccgcat cacgaggatc
     2881 gacggcgcca ggtggaagcc gtgctcgaag gcatcggggc tgccgaggtc gactgcctgc
     2941 gggtgtacaa taaggtcgat caggcgccac ccgatttcgt ccgggagttc gacggcgccg
     3001 ggatcaccaa gcactgcgtg tccgccgtga ccggggaggg cctcgaagcc ctccgggaag
     3061 cgatccgggt gcgggtggcg ggtgcgcggg tggcgggcga gctgcgcttg cggccggatc
     3121 aaagccggtt gcgcgcgcgt ttgttcggct ggcacgcggt gcgcggcgaa accgtggaga
     3181 aggacggcgg ctatacgctg gccgtggatc tgccggccca gcgctggcgg cagctgcgcg
     3241 acgaagaagg cttgtcagcg gacagtattc gacagaaagt gtgacacacg atggcgtggg
     3301 atgacggcga caaagggaac ccgtggcgtt ctgataagga caagggtccg gcagatctgg
     3361 acgccgtggt gcgcgacctg caacgcaagc tggcaggctt gtttcgcggc ggcggagcgg
     3421 ggcgaggcgg gggcggcgat caggct
//
LOCUS       DATCUD010000090         2948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15171, whole genome shotgun sequence.
ACCESSION   DATCUD010000090 DATCUD010000000
VERSION     DATCUD010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15171"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1146
                     /locus_tag="VIQ99_01310"
     CDS             <1..1146
                     /locus_tag="VIQ99_01310"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF036799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY9181804.1"
                     /translation="LWTVLGLEVPPPRVGEIFAQLEMQVEETRDGWRITPPPFRFDIA
                     IEEDLIEEVGRMVGYDSIPVTPGTVREALGLAGETRIGAESVADLLVSRGYAEAITYS
                     FIDAELEAFVNPGVEAVELANPISSDMAVLRRSLWPGLITAARLNLSHQRPRLKLFEI
                     GPQFTADGGGVTQTTVVAGLALGGRAPEHWDRAAAGSVDYFDVKGDIEALLRLTGAVR
                     KFRFEVGSHPALSPGRTARIVRDQRTVGWLGGLHPDVQKRLDKRQSAVVFALQLDALS
                     PAVLPAFRRYSKFPSIRRDLAIVVDDGVTADALIEVVRAAAGDILQQVLVFDVYRGKG
                     VDSRRKSIGLGLILQDASRTLTDEDADQKTRSVMLSLEREFGATIRT"
     gene            1171..1470
                     /gene="ihfA"
                     /locus_tag="VIQ99_01315"
     CDS             1171..1470
                     /gene="ihfA"
                     /locus_tag="VIQ99_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEY9181805.1"
                     /translation="MALTKANMAESLFNELGLNKREARELVDSFFEDLRAALAVGEQV
                     KLSGFGNFDLRDKNKRPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTRE"
     gene            1451..1807
                     /locus_tag="VIQ99_01320"
     CDS             1451..1807
                     /locus_tag="VIQ99_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_251427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY9181806.1"
                     /translation="MLEPGNNSDLPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQ
                     LKPVKRRGNRRYYQRQDVLIIRQIRSLLYEEGFTIGGARQRLMGDEAKSDTSQSQQII
                     RQIRAELEDVLKLLRR"
     gene            1876..1952
                     /locus_tag="VIQ99_01325"
     tRNA            1876..1952
                     /locus_tag="VIQ99_01325"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1910..1912,aa:Pro,seq:ggg)
     gene            2039..>2948
                     /locus_tag="VIQ99_01330"
     CDS             2039..>2948
                     /locus_tag="VIQ99_01330"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9181807.1"
                     /translation="MFLEQYKLEANPFVADAARPVFASHSMRYATLKLDELIARNIQS
                     LFLSGPAGVGKTLLTRQRFRQLKDVTYAWVKPTCETREEFLAQLLAEIGPAPVQGSAT
                     ELHRILEVFLRHQAGNGRFAYVVADGLERFAEPVLRELESLAQARLRNRPVVYVLGIT
                     RSEELVANLIPQYDGGPFARAAHQRLSGFTLDETRAYVWACLRGAGCNWAEELIPEEI
                     VPDIQAFTQGTVGDINAICCTALDAIAARSTGSNRQPKITRVLLKEAGASLNLRYDAS
                     AWAQPVEELSADAVHLSDRTELRLEAA"
BASE COUNT          567 a          926 c          938 g          517 t
ORIGIN      
        1 ctttggaccg tgctcgggct cgaggtgccg ccgccgcgcg tcggcgaaat ctttgcgcag
       61 ctcgagatgc aggtcgagga gactcgcgac ggctggcgaa taacgccgcc cccgtttcgc
      121 ttcgacatcg cgatcgagga agacttgatc gaggaagttg gccggatggt gggttatgac
      181 tccattcccg tgacgcccgg caccgttcgg gaagcactgg gcctcgccgg cgagacgcgc
      241 ataggcgcgg aaagcgtcgc ggacctgcta gtgtcccgcg gctatgcgga agccatcacc
      301 tacagcttca tcgacgcgga gctcgaggcg ttcgtgaacc cgggcgtcga ggccgtggag
      361 ctcgcgaacc cgatatcgag cgacatggcg gtgctgcgcc gttcgctgtg gcctggactc
      421 atcacggccg ctcgtctgaa tctgagtcac cagcggccgc gactgaagct gttcgaaata
      481 ggtccgcaat tcaccgcgga tggcggtggc gttacgcaaa cgaccgtcgt cgcgggtctc
      541 gcgcttggcg gccgtgctcc ggagcactgg gaccgagcgg cggccggcag cgtcgactat
      601 ttcgacgtaa agggcgatat cgaggcgctg ctgcgtctca cgggcgccgt tcgcaaattc
      661 cggttcgaag tgggttcgca tccggcgctc tcccccgggc gcacggcgcg catcgtgcgc
      721 gatcaacgca cggttggctg gctcggcggc ctgcacccgg atgtacagaa gcgattggac
      781 aaaagacagt cggcggtcgt gttcgcgcta cagctcgacg cgctgtcgcc cgccgtgcta
      841 ccggcgtttc gccggtactc gaagtttccg tcgatccgcc gcgacctcgc gatcgtcgtc
      901 gatgacggcg tgacggccga cgcgttgatc gaagtggtgc gcgcggcggc gggcgacata
      961 ctccaacaag tcctcgtttt cgacgtatac cgcggcaaag gggtagattc aaggcgaaaa
     1021 agcattggtt taggcttgat tttgcaggac gcctcacgca cgcttaccga cgaggacgcc
     1081 gatcaaaaga cgcgttccgt catgctcagc ctcgagcgtg agttcggagc gacgataaga
     1141 acctaacaag aatcggacgc cgaatttgat atggcactga ccaaagcgaa catggccgag
     1201 tcgttgttca acgagctcgg cttgaataaa cgcgaggctc gcgagctcgt cgattcgttt
     1261 ttcgaagatt tgcgtgcagc gctcgctgtc ggcgaacaag tcaagctttc cggcttcgga
     1321 aacttcgatt tgcgtgataa aaacaaacgt cccggacgaa atccgaagac cggcgaggag
     1381 attccgatca ccgcccgccg cgtcgtcaca ttccgtcccg gccaaaaact aaaagcgcga
     1441 gtcgaggcct atgctggaac cagggaataa cagcgacctc ccaccgattc cgggcaaacg
     1501 ctacttcacg atcggtgagg tcagcgagtt atgcgcagtg aagccgcacg tgctgcgcta
     1561 ctgggagcag gagttccctc agctcaagcc ggtcaagcgc cgtggcaatc gccgttatta
     1621 tcaacgccag gacgtgctga tcattcgcca gatccgcagc ctgctctacg aagaaggctt
     1681 tacgatcggc ggcgcacgcc agcgcctcat gggcgacgaa gccaagagcg acacgagcca
     1741 gagccaacag atcattcgtc aaatccgcgc cgagctcgaa gacgtcctca agctgctgcg
     1801 gcgctagcgg aaaccgggcc cccgtagcgc gaggtaggcg gggcgacgcc ttatcgttaa
     1861 actggctacc tcggtcgggg cgtggcgcag cctggtagcg cacttgcatg gggtgcaagg
     1921 ggtcgcaggt tcaaatcctg tcgccccgac caattcgttt ccccctagtg cggcgggtat
     1981 tcaacgggta tcgtcggagc caccgcagaa gaagaaccca ccagaaacgg gctacgcatt
     2041 gttcctcgag cagtacaagc tggaagccaa tcccttcgtc gcggatgccg cacgacccgt
     2101 gttcgcgtcg cattcgatgc gctacgcgac gctcaagctc gacgagctga tcgcgagaaa
     2161 catccaatct ctgttcttga gcggccccgc cggcgtcggc aagaccctgc tgacgaggca
     2221 gcggttccgc cagctcaagg acgtcacgta cgcgtgggtc aagccgacct gcgaaacgcg
     2281 ggaagagttt ctcgcgcagc tcttggccga gatcggcccg gcacccgtcc agggttcggc
     2341 gaccgagctg caccgaattc tcgaggtgtt tctacgccat caggccggca acggccgttt
     2401 cgcctacgtg gtcgcggacg gcctcgagcg cttcgccgaa ccggtgctcc gagagctcga
     2461 gtcgctggcg caggcgcgcc tgcgaaaccg gcccgtggtc tacgttctcg gcatcacgcg
     2521 cagcgaagag ctcgtggcca acctgattcc acagtacgac ggcgggccgt tcgcccgcgc
     2581 cgctcatcag cgcctgtccg gttttacgct cgacgagaca cgcgcatacg tttgggcatg
     2641 cctacgtggc gccgggtgca attgggcaga ggagctgata cccgaggaga tcgtccccga
     2701 catccaggcg ttcactcagg gcaccgtcgg cgacatcaac gcgatctgtt gcacggcgct
     2761 cgacgcgatc gccgctcggt cgaccgggag caaccgacag ccgaagatca cgcgcgtgct
     2821 gctgaaggaa gccggcgcca gcctgaatct gcgctacgac gcgtcggcct gggcgcagcc
     2881 cgtcgaagag ttgtccgcgg acgccgtgca cttgagcgac cgtaccgagc tgcgcctgga
     2941 agcggctc
//
LOCUS       DATCUD010000091         1824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_71967, whole genome shotgun sequence.
ACCESSION   DATCUD010000091 DATCUD010000000
VERSION     DATCUD010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1824
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71967"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VIQ99_01335"
     CDS             complement(<1..549)
                     /locus_tag="VIQ99_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018609694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIR synthase related protein"
                     /protein_id="HEY9181808.1"
                     /translation="MDKPGLDYAAAGVDYGTLDASKILAQRAARATAANLDMHGAAEI
                     EASRGESAYLVDVDGVLIASITECLGTKALVADAVRAYSGRTHYDTIAQDTLAMAVND
                     LITVGATPLSVHAYWSAGSSDWFADRQRMEDLVRGWQAACDACGVSWGGGETPALGGV
                     VEAGRIDLAASCVGIVKSRDRLM"
     gene            complement(618..1448)
                     /gene="aroE"
                     /locus_tag="VIQ99_01340"
     CDS             complement(618..1448)
                     /gene="aroE"
                     /locus_tag="VIQ99_01340"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019621203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEY9181809.1"
                     /translation="MTNKTVPDRYGVVGHPVEHSRSPLIHTVFARQTGQNLTYELLDC
                     EPAAFETAVRGFGAAGGKGLNVTLPHKEAAFELCDEHSDAARLAGAVNTISIDAGRLH
                     GDNTDGVGFIRDVTVNQRQPLMGRRIVVLGAGGAARGVLGPLLAEQPAEIVVANRTLD
                     RAEQLVAAFGRHPRLRAASFAELANLPPFDVLVNATSAGLKGEAPPFPTSLVGPESFC
                     YDLVYGSNDTPFVTWALAQGAARAVQGWGMLVEQAAESFWIWRGVRPDTRQLLKQIPR
                     "
     gene            1603..>1824
                     /locus_tag="VIQ99_01345"
     CDS             1603..>1824
                     /locus_tag="VIQ99_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012486280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9181810.1"
                     /translation="MFVLSPQSGIPIYRQLVTQVTRLIAGGQLAAGAELPSVRELAEL
                     HAVNPMTISKAYALLESEGLLERQRGKPMR"
BASE COUNT          279 a          623 c          627 g          295 t
ORIGIN      
        1 catgagccgg tcgcgcgact tcacgatgcc gacgcacgat gccgcgagat cgatgcggcc
       61 ggcttcgacg acgccgccga gcgccggtgt ctcgccgccg ccccacgaca cgccacaggc
      121 gtcgcaggcc gcttgccagc cgcgcacgag atcctccatg cgctgtcgat ccgcgaacca
      181 atcgctgctg ccggccgacc agtacgcgtg cacggacaga ggcgtggctc caaccgtgat
      241 caggtcgttg acggccatcg cgagcgtgtc ttgtgcgatc gtgtcgtagt gcgtgcgtcc
      301 ggagtaggcg cgcacggcgt cggcgacgag cgccttcgtg cctaggcatt cggtgatcga
      361 cgcgatcagg acgccgtcga cgtcgacgag atacgccgac tcgccgcgcg acgcctcgat
      421 ctcggccgcg ccgtgcatgt cgagattcgc ggccgttgcg cgcgcggcgc gttgcgcgag
      481 gatcttcgag gcatcgagcg tgccgtagtc gacgccggcg gcggcatagt cgagaccggg
      541 cttgtccatc gatcggctcc gaggaatccg cgcatcatac cggcgcggcc gctgcttggc
      601 tccgcgcggg gttctcgcta gcgcgggatc tgcttgagca gctgcctcgt atcggggcgc
      661 acgccgcgcc agatccagaa cgactcggcg gcctgctcga ccaacatgcc ccagccctgg
      721 acggcgcggg cggcgccttg ggctaaagcc caggtcacga acggcgtgtc gttcgagccg
      781 tagacgaggt cgtagcagaa gctctccggg ccgaccagcg aggtcgggaa cggcggtgcc
      841 tcgcctttga gtcccgcgga ggtcgcgttc acgagcacat cgaacggcgg caagttcgcc
      901 agctctgcga acgaggccgc gcgtagccga gggtggcgcc cgaacgccgc aacgagctgc
      961 tcggctcgat ccagcgtgcg gttcgcgacg acgatctcgg ccggctgctc ggccagcagc
     1021 ggccccagga cgccgcgggc ggccccgccg gcgccgagca cgacgatcct gcggcccatg
     1081 agcggctggc gctggttcac ggtcacgtcg cggatgaagc cgacgccgtc ggtgttgtcg
     1141 ccgtgcaagc ggcccgcatc gatgctgatc gtgttcacgg cgccggccag gcgcgccgca
     1201 tcgctgtgct cgtcgcacaa ctcgaacgcc gcctccttgt gagggagcgt gacgttcaac
     1261 cccttaccgc ccgcggcgcc gaagccgcgc acggcggtct cgaacgccgc gggctcgcaa
     1321 tcgagtagct cgtaggtgag gttctgcccg gtttggcggg cgaaaacggt atgaatcagc
     1381 ggcgaccggc tgtgctccac gggatggccg acgacgccgt aacgatccgg aacggttttg
     1441 ttcgtcattc agcagtattc tcgcccgcgg attctgcggg gttgcgcgtc cgttgccaag
     1501 cggattcgtg cctcgaatcg gtgcatcccg atcgaccgcg ttgacgccgt ccttcatgtg
     1561 tattagtgta ccgatacaca tagaccgagg acgtggaccg ctgtgttcgt cctgagcccc
     1621 caatccggca taccgatcta ccggcagctc gtgactcagg tcacgcgctt gatcgccggc
     1681 gggcagctcg ccgccggcgc cgagctgcct tcggtgcgag agctcgcgga gcttcacgcc
     1741 gtgaacccga tgacgatctc gaaggcctac gcgctactgg agagcgaggg actcctcgag
     1801 cggcagcgcg gcaagccgat gcgc
//
LOCUS       DATCUD010000092         1514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_57718, whole genome shotgun sequence.
ACCESSION   DATCUD010000092 DATCUD010000000
VERSION     DATCUD010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57718"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            34..>1514
                     /locus_tag="VIQ99_01350"
     CDS             34..>1514
                     /locus_tag="VIQ99_01350"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9181811.1"
                     /translation="MADAYAATKANAPLVWDAISGNVCFHLALGDRAAADAAFKLAAR
                     VVRVELVNNRLVANSLEPRAAVAEYDAATDRSTLTTPTQGPHLIHGQLADAVLKIPPQ
                     KLRVVSGNVGGGFGMKIFAHPEQPLVVWASRRLKRAVRWTGERSESFLSDVQGRDNYT
                     IVELALDANARFLALRVQTYANMGAYLSNFGPFIPQLALFVLSGVYRIPAIALDLKGV
                     MTNTVPVDAYRGAGRPEGIYLVERVVDAAARESGLPPDEIRRRNFIDAFPYQTPVDSN
                     YDSGDFDGAMRLAMERADWNGFAARREAAAKRGKLRGIGLAMYIERCGGGTGDTVTVK
                     VSGDGKVTALSGMQDNGQGHASGLKQILSERFGIDADAIEVVQGDTDVTPNGMTGGSR
                     FLAIGGVAAQSAADEAIAKGKDTAGSLLEAASADVEYRDGQYWIAGTDRGVSLFEVAK
                     KARGLEATHTRNPDTYTYPNGCHIVEVEIDPETGETRIERYTIV"
BASE COUNT          260 a          504 c          538 g          212 t
ORIGIN      
        1 ctgatcgaga tcgagtacgc ggctttgccg gccgtggcag acgcctatgc agcgacgaag
       61 gcgaacgcac cgctcgtatg ggacgcgatc tccggcaacg tttgcttcca tctcgccctc
      121 ggggaccgcg ctgcggccga cgccgcgttc aagctcgccg ccagggtggt ccgtgtcgag
      181 ctggtgaaca accgactcgt cgccaactcg ctcgagccgc gcgccgcggt agccgagtac
      241 gacgcggcga ccgaccgttc gacgctcacg acgccgaccc agggcccgca tctcattcac
      301 ggccagctcg cggatgcagt gctgaagatc ccgccgcaga agctgcgggt cgtgtcgggg
      361 aacgtgggcg gcggcttcgg catgaagatc ttcgcccacc cggagcagcc gctggtggtg
      421 tgggcttcgc gcaggctgaa gcgcgcggtg cgctggaccg gcgagcgcag cgagagcttc
      481 ctctccgacg tccagggacg cgacaactac acgatcgtcg agctggcgct agacgcgaac
      541 gcgaggtttc tcgcgctgcg ggtgcagacg tacgcgaaca tgggcgccta cctctccaac
      601 ttcgggccgt tcatcccgca gctcgcgctg ttcgtgctgt ccggcgtata ccggatcccg
      661 gcgatcgcgc tcgacctgaa gggcgtgatg acgaataccg tgccggtgga cgcgtaccgc
      721 ggcgccggcc ggccggaggg catctatctg gtcgagcgcg tggtggacgc ggccgcgcgg
      781 gagtccggac tcccgccgga cgagatccgc cggcgcaact tcatcgacgc ctttccctat
      841 cagaccccgg tcgacagcaa ctacgacagc ggcgacttcg acggcgcgat gcggctcgcg
      901 atggagaggg cggactggaa cggattcgcc gcgcgacgcg aggcggcggc gaagcgcgga
      961 aagctgcgcg gcatcgggct ggcgatgtac atcgagcgct gcggcggcgg caccggcgac
     1021 acggtgaccg tgaaagtgtc gggagacgga aaggttaccg cgctgtccgg catgcaggac
     1081 aacggccagg gccacgcgag cggcctgaag cagattctct ccgagcgctt cggcatcgac
     1141 gccgacgcga tcgaggtcgt gcagggcgac accgacgtca cgccgaacgg gatgaccggc
     1201 ggctcgcgct tcctcgcgat cgggggcgtc gcggcgcagt ccgccgccga cgaggcgatc
     1261 gcgaaaggca aggacaccgc ggggagcctt ctcgaagccg cttcggccga cgtcgagtac
     1321 cgcgacgggc agtactggat cgccgggacc gatcgcgggg tgtcgctctt cgaggtcgcg
     1381 aagaaggcga gggggttgga agcgacgcac acccgcaacc cggacaccta cacctacccg
     1441 aacggctgcc acatcgtcga ggtcgagatc gaccccgaga ccggcgagac gcgcatcgag
     1501 cgttacacca tcgt
//
LOCUS       DATCUD010000093         1801 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50703, whole genome shotgun sequence.
ACCESSION   DATCUD010000093 DATCUD010000000
VERSION     DATCUD010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1801)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1801)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1801
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50703"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..897)
                     /locus_tag="VIQ99_01355"
     CDS             complement(<1..897)
                     /locus_tag="VIQ99_01355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019916939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEY9181812.1"
                     /translation="MMAVDFAQPLALLLLPLAVLPLFGRRRDTLTFSHLAWLPRDRMG
                     QLAGFLWRALAVLAIGSMVVALASPGRAETQVMRTGYGAEILVLVDRSRSMDNRMLPS
                     DWRTIDQLDLRHHVWSRGPIKAQVARGLLAEFVHQRQSDRFAVMFFSTNPLNVVPFTQ
                     HDEVVLAGIEAGGVGRGLGDTDVGKAMLAAIGEFEQRPYSGSRIILLVSDGGAQLDDA
                     TRRRIQAGMLRNRIALYWIYIRSFNSPALDAQDRDSEAVPEIALHRFLQTLGTPYQAY
                     QADVPEDLAKAVADVGKQQNLPL"
     gene            complement(894..1748)
                     /locus_tag="VIQ99_01360"
     CDS             complement(894..1748)
                     /locus_tag="VIQ99_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181813.1"
                     /translation="MYLIAVIVAATGAIDAGAAPAAVVEQPRPFGHVIGDVVTQRVLL
                     EIEGRELEPAALPKAERVGVWFERRPARIELGPDGHRWLIVEYQVINAPQALTTVNLP
                     SFELQGLSAGIALKIGEWPISVNALTPRTAFRAGGLDELRPDRAATTIATEPIRRQIV
                     IWSGAFLLTLAVWLAWVVWRNWRAATARPFARALHDMRRLDETAPEAWQALHRAFDET
                     AGRVIQVATLPTLFDRAPHLRSLRSQIERFYAQSGELFFGGGSPADRPSTRALCAQLR
                     RIEKRHER"
BASE COUNT          315 a          606 c          596 g          284 t
ORIGIN      
        1 cagcggcaga ttctgctgct tgccgacgtc ggcgacggcc ttcgccagat cctcggggac
       61 gtcggcctga taggcttgat acggtgtccc caaggtctgg aggaagcggt gcagcgcaat
      121 ttccgggact gcttcgctgt cgcgatcttg cgcgtcgagc gcggggctgt tgaaggatcg
      181 aatgtagatc cagtacagcg cgatgcgatt gcgcaacatg ccggcttgga tccggcgtcg
      241 cgtcgcgtca tcgagctgag cgccgccatc cgacacgagc aggatgatcc ggctgccgga
      301 gtacggacgt tgctcgaact cgccgatcgc cgcgagcatc gctttgccga catcggtgtc
      361 gcccaggccg cgacctacgc cgcccgcctc gatccccgcc aggacgactt cgtcgtgctg
      421 ggtgaacgga acgacgttca gcggattggt gctgaagaac atcaccgcga atcggtcgct
      481 ctggcgctgg tgcacgaatt ccgcaagcag gccgcgcgcg acctgcgcct ttatcggacc
      541 gcgcgaccag acgtggtgcc gcagatcgag ctggtcgatc gtccgccagt cgctcggcag
      601 catgcgattg tccatgctgc ggctgcgatc cacgagcacc aggatctcgg cgccgtaccc
      661 ggtgcgcatg acttgcgttt cggcccgtcc cgggctcgcc agtgcgacga ccatgctgcc
      721 aatcgcgagg accgccaacg cgcgccagag aaagccggcg agttgcccca tgcggtcgcg
      781 cggcaaccag gcgaggtgcg aaaaggtcaa cgtatcgcgc cgccggccga acagcggcaa
      841 gacagcgagc ggcagcagca gcagcgccaa gggttgtgcg aagtcgacgg ccatcatcgt
      901 tcgtgccgct tctcgatccg ccgcagctga gcgcagagcg cgcgcgtcga cggccgatcg
      961 gccggcgacc cgccgccgaa aaacaactcg cccgactggg cgtagaaccg ttcgatctgc
     1021 gaacgaagcg atcgcagatg cggcgcccgg tcgaatagcg tcggcagcgt cgcgacctgg
     1081 atgacgcggc cggcggtctc gtcgaaggcg cgatgcagcg cctgccacgc ttccggcgcc
     1141 gtttcgtcga gacgacgcat gtcgtgcagc gctcttgcga acggccgcgc cgtagctgcc
     1201 cgccaattgc gccacacgac ccaggcgagc cagacggcga gtgtgagcag gaacgcgccc
     1261 gaccagatga caatctgtct tcggatcggt tcggtcgcga tcgtggtagc ggcgcggtcg
     1321 ggcctcagct cgtccaaccc tccggcccga aatgcggtgc ggggagtcag cgcgttcacg
     1381 ctgatcggcc attccccgat cttgagggcg atcccggcgg acagaccctg gagctcgaag
     1441 gacggcagat ttaccgtcgt caaagcttgc ggcgcgttga tcacctggta ctccacgatc
     1501 agccagcgat gtccgtcggg acccaactcg attctggccg ggcgccgctc aaaccaaacg
     1561 cccacgcgtt cggctttcgg cagtgcggca ggctccaatt cacgcccctc gatctcaagc
     1621 agcacccgct gagtcaccac gtcgccgatg acgtgaccaa aggggcgcgg ttgctcgacg
     1681 acggcagccg gcgccgcacc ggcgtcgatc gcgccggtcg cagcgacgat tacggcgatc
     1741 aggtacacgc gacgcagagg ccagcgggtc gtgcgcctca tgcctcggcc tccaggaagt
     1801 a
//
LOCUS       DATCUD010000094         2406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79144, whole genome shotgun sequence.
ACCESSION   DATCUD010000094 DATCUD010000000
VERSION     DATCUD010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79144"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            125..532
                     /locus_tag="VIQ99_01365"
     CDS             125..532
                     /locus_tag="VIQ99_01365"
                     /inference="COORDINATES: protein motif:HMM:NF020397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEY9181814.1"
                     /translation="MSSTRPKTVDEYIARFEPKVRAILRKVRRTVRRAAPRAREVISY
                     SMPALRQNGILIYFAAFKSHLGFYPPVRGDAKLTKAAARYAGEKGNLRFRFAEPIPYT
                     LIAALTKLRARQDAAKAVSRPRARRAAPSRARR"
     gene            complement(483..1883)
                     /locus_tag="VIQ99_01370"
     CDS             complement(483..1883)
                     /locus_tag="VIQ99_01370"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEY9181815.1"
                     /translation="MSLALKHTPTRADFAALSRLAGPLVLIHVGTMLMGVVDTIMVGR
                     VSAAALAAVALGNMYFFAISIFGMGVLFALDPIIAQALGARDELAVRRGLQRGLVLSL
                     VLTVPITLALLTVRPVLELVNQPADVIPNAAGYVYRNALSVWPFYVFVVLRQTLQAHH
                     RVLPIGLTIVAANVVNVVLNYAWIYGNFGFPAMGVIGSAWATTASRWLMALMLLALGW
                     STLKRYFAERAPNLLDVQPLWRMLRLGLPIGAQMMLEGGAFNIMALLMGWLGVVQVAA
                     HQIALNLASLTFMVPLGVSSAAAVIVGHAVGRGDPEGVRRSTVASLAVGAGFMLFTGV
                     LFIAAPELLARLYTPEMVVIALAALLLPIAGVFQVFDGLQVVAIGLLRGLGDTRTPMV
                     VNVVGFWCIGMPVSLWLGFGLGYGAQGLWWGLVVGLVVVAVFLIVRVRQREHHGLERI
                     IIDEHAKALRAEPVVD"
     gene            complement(1957..>2406)
                     /locus_tag="VIQ99_01375"
     CDS             complement(1957..>2406)
                     /locus_tag="VIQ99_01375"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013401.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY9181816.1"
                     /translation="DWDKLAAGQGCPFDAPRAANTPHWDLVAQLTASSWYLPQNQMYR
                     GHGVLVFDPRHVTRLEDLSADEWAAYAADLHRVVRAIGAVCTPDHLNVESLGNVVPHL
                     HWHVIPRYRNDGRWGQPIWAQDVNAQPERRLAADDRAALLAALRAVL"
BASE COUNT          488 a          823 c          778 g          317 t
ORIGIN      
        1 cagatggctg gccgtcactt ccacaaacga tgattgcgcc aacgtgggcc cggcgctgac
       61 agcgaccacg attgcggcga gaatggcggc acgcatcatg aataaggtaa ccaaatctcg
      121 gccgatgagc agcacccgac ctaagaccgt cgacgagtac atcgcgcgat tcgagccgaa
      181 agtccgggcg atcctgcgca aggtccgccg cacggtgcgg cgagcggccc cgcgtgcgcg
      241 cgaggtgatc agctactcga tgccggcgct gaggcagaac ggaatcctga tctacttcgc
      301 ggcgttcaag agccacctcg gtttctatcc gccggtcaga ggggatgcga agcttaccaa
      361 ggcggctgcg cgctacgcgg gcgagaaagg caacctgcgc ttcagattcg cggagccgat
      421 tccatacacg ctgatcgcgg ctctgacgaa gctgcgcgcg cggcaggatg cggcgaaggc
      481 cgtcagtcga ccacgggctc ggcgcgcagc gccttcgcgt gctcgtcgat gatgatgcgc
      541 tcgagcccgt ggtgctcgcg ctggcgcacg cgcacgatca ggaacacggc cacgaccacg
      601 agcccgacga cgagccccca ccacaggccc tgcgcgccgt agccgagacc gaagccgagc
      661 cataggctca ccggcatgcc gatgcaccaa aagccgacga cgttcacgac catcggcgta
      721 cgcgtatcgc cgaggccgcg caacaaaccg atcgcgacga cctgcaaccc gtcgaacacc
      781 tggaacacac ccgcaatcgg caacagcaag gccgcaagcg caatcacgac catttccggc
      841 gtgtagagcc tcgccaagag ctccggcgcg gcaatgaaca gcacgccggt gaacagcatg
      901 aatcccgctc cgaccgcgag cgaagcaaca gtggaacgac gcacgccttc ggggtcaccg
      961 cgcccgaccg cgtgtcccac gatcaccgcc gccgccgagg agacgccgag cggcaccatg
     1021 aacgtcaacg acgcgaggtt caacgcgatt tgatgggcgg cgacctgcac gacaccgagc
     1081 caacccatga gcaacgccat gatgttgaac gcgccgccct cgagcatcat ctgcgcaccg
     1141 atcggcaatc cgagccgaag catgcgccac aacggttgga cgtcgagcag attcggggct
     1201 cgctccgcga agtagcgctt caacgtgctc caaccgagcg caagcagcat cagcgccatc
     1261 aaccagcggc tcgccgtggt cgcccacgcg gagccgatca cgcccatggc cggaaagccg
     1321 aagttgccgt agatccacgc gtagttcagc acgacgttga ccacgttcgc cgcgacgatc
     1381 gtgaggccga tcggcaagac ccgatgatgt gcctgcaacg tctgacgcag cacgacgaac
     1441 acgtagaacg gccacaccga gagcgcgttg cgatacacgt aacccgccgc attcggaatc
     1501 acatcggccg gctggttcac gagctcgagc acgggccgca ccgtgagcaa cgcgagcgtg
     1561 atcggcacgg tcagcacgag cgacagcacg agcccacgct gcaagccgcg gcgcaccgcg
     1621 agctcgtcgc gcgcgccgag cgcctgcgcg atgatcggat cgagcgcgaa cagcacgccc
     1681 atgccgaaga tcgagatcgc gaagaaatac atgttgccga gcgccacggc cgcgagcgcc
     1741 gcggccgaga ctcggccgac catgatcgtg tcgacgacgc ccatcaacat ggtgccgacg
     1801 tgaatcagca cgagcggccc cgcgaggcgc gacaacgccg cgaagtcggc gcgtgtcggc
     1861 gtgtgcttca gggcgaggga catggcggcc accgtcgcga gggggtgcgc agcttagccg
     1921 atcggcgtgt gcgccgcctc tcccgttcgg cgacggttag agcacggcac gcagcgcggc
     1981 gagcagcgcc gcgcggtcgt cggcggcaag gcgccgttcg ggttgcgcgt tgacgtcctg
     2041 tgcccaaatc ggctgtcccc aacgcccatc gttcctgtag cgcggaatca cgtgccagtg
     2101 caggtgcgga acgacgttgc cgagcgactc gacgttgagg tgatcgggcg tgcacacggc
     2161 gccgatcgca cgcacgactc ggtgcaagtc cgcggcatac gcggcccact cgtcggcgga
     2221 tagatcctcg agccgtgtga cgtgccgcgg atcgaacacg agaacaccgt ggccgcggta
     2281 catctggttc tgcggcaagt accacgacga cgcggtcagt tgagccacga gatcccagtg
     2341 cggggtgttc gccgcgcgcg gtgcgtcgaa cgggcagccc tgtcccgcgg ccagcttgtc
     2401 ccagtc
//
LOCUS       DATCUD010000095         2386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_72016, whole genome shotgun sequence.
ACCESSION   DATCUD010000095 DATCUD010000000
VERSION     DATCUD010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72016"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VIQ99_01380"
     CDS             complement(<1..391)
                     /locus_tag="VIQ99_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012249331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HEY9181817.1"
                     /translation="MSRHPHSHPSSAQILADRVISTLERFLHVETVSGTLLLLVTVIA
                     LVWANSPLGDTYQHFWHAPLVIGIHGYTIQQPLHFWINDALMTVFFLVVGLEIRREIH
                     EGALASLRLAALPLAAAIGGVVVPASLY"
     gene            complement(467..1633)
                     /gene="mnmA"
                     /locus_tag="VIQ99_01385"
     CDS             complement(467..1633)
                     /gene="mnmA"
                     /locus_tag="VIQ99_01385"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011507737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEY9181818.1"
                     /translation="MSTPLTIVALSGGVDSAVAALLLRDAGHTVQCLHMTNWEDDRYC
                     DNAREFQDARRVCLELGLPLHRVNFAREYREQVFTDFLAEYRKGRTPNPDVLCNRHIK
                     FGIMRSYARRLGATRIATGHYARVVVANGTPQLLKGVDDGKDQSYFLHAVSAPELVDV
                     LMPLGGLLKSEVREIARSAGLSVADKRDSTGICFIGERPFADFLHQYLPDTPGVIRDD
                     SGAERGRHRGLPYYTLGQRHGLGLGGAADRPDDAWYVAAKDAERNELIVVQGHEHPWL
                     LREGLAADEMHWIGAPPEAWLVGTPLRCHAKIRYRQRDQACTIVRTGERSLEAHFDTR
                     QRTPTPGQFIVLYDGDRCLGGATIDAPLGNNTAQPRYDTALGTSPARATGVTLR"
     gene            complement(1669..2133)
                     /locus_tag="VIQ99_01390"
     CDS             complement(1669..2133)
                     /locus_tag="VIQ99_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006461710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY9181819.1"
                     /translation="MTVAAIIERDGRFLMVEERAASGLVLNQPAGHLEQGESLVTAVV
                     RETIEETGHHFDPSHVVGFYLWRSEEAGTTYLRVVFCGTAEPSADVAPLDEEIVAVHW
                     LTRSQLLSKQRQLRSPMVMRCLDDYLAGRRYPLHCLTYLDPRALDLDLPVYA"
     gene            complement(2159..>2386)
                     /locus_tag="VIQ99_01395"
     CDS             complement(2159..>2386)
                     /locus_tag="VIQ99_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181820.1"
                     /translation="LNSYIEFRRMQPELGTHPEAFLIADEQALVYRARAETWDGVSDT
                     YEPAVARMYLSKFESLWNACEIEAEVRQLQL"
BASE COUNT          424 a          765 c          790 g          407 t
ORIGIN      
        1 gatacagcga agcgggcaca accaccccgc cgatggctgc ggcgagcggc agggccgcga
       61 gacgcaggct cgccagagct ccctcgtgaa tttctcggcg gatttcgagc ccgacgacca
      121 agaagaagac ggtcatcaac gcgtcattga tccagaagtg cagtggctgc tggatcgtat
      181 agccgtggat gccgatcacc agcggcgcgt gccaaaagtg ctgataggtg tcgccgagcg
      241 gcgagtttgc ccagacgagc gcaatcaccg tcaccagcaa cagcagggtg ccgctgacgg
      301 tctcgacgtg gagaaaacgt tcgagcgtcg agatgacgcg gtccgcgagg atctgcgcgg
      361 acgacggatg agaatgcggg tgccggctca tgtcgagcgc ctccacggtt ggcggcccga
      421 ccaacacttc cctgtctgcc gcgtgaagcc gcggccaaga cacccgttag cgcaatgtta
      481 ccccggtcgc acgcgctggg gaagttccga gcgcggtgtc gtagcgcggc tgcgctgtgt
      541 tgtttcccaa tggcgcgtcg atcgtagcgc cgcccagaca ccgatctccg tcatacaaca
      601 cgatgaactg gcccggcgtc ggagtgcgtt ggcgtgtatc gaaatgtgct tcgagcgacc
      661 gctcgccggt ccgcacgatc gtgcacgcct gatcccgttg tcggtagcgg atcttcgcgt
      721 ggcagcgaag cggtgtgccg accagccacg cctcgggtgg tgcgccgatc cagtgcattt
      781 cgtcggccgc gaggccctcg cggagcagcc acggatgctc gtgtccttgc accacgatca
      841 gctcgttgcg ctcagcatcc ttcgcggcga cgtaccaggc gtcgtcgggt cgatcggccg
      901 cgccgcccag acctaagccg tgacgctggc cgagcgtgta atacggcaag ccgcgatggc
      961 ggccgcgctc ggcacccgaa tcgtcgcgga ttacgccggg cgtgtcgggc aggtactggt
     1021 gcaggaaatc cgcgaacggg cgctcgccga tgaaacagat ccctgtgctg tcgcgcttgt
     1081 cggccaccga gagcccggcg ctccgggcaa tctcgcggac ctccgacttc aggagcccgc
     1141 cgagcggcat cagcacgtcg acgagctcgg gcgcggacac cgcgtgcaag aagtagctct
     1201 gatccttgcc gtcgtcgacg cctttcagga gttgcggtgt accgttcgcg acgacgacac
     1261 gtgcgtaatg cccggtcgcg atccgcgttg ccccgagcct tcgcgcgtag ctgcgcatga
     1321 tgccgaactt gatatgccga ttgcacaaca cgtcggggtt cggcgtgcgg cccttgcggt
     1381 actcggccag aaaatccgtg aacacctgct cgcggtactc gcgggcgaag ttcacgcgat
     1441 gcagcggcag gccgagctcc agacagactc ggcgcgcgtc ctgaaactca cgcgcgttgt
     1501 cgcagtaccg gtcatcctcc cagttcgtca tgtgcaggca ctggacggtg tgtcccgcgt
     1561 cgcgcaacaa cagcgctgcg accgcggagt ccacaccgcc cgagagcgcg acgatcgtga
     1621 ggggagtcga catccccaaa ttctaacagt gaccctgccg gcgccggctc aggcgtagac
     1681 gggcaagtcg aggtcgagcg cgcgcggatc gaggtaagtc aggcagtgga ggggatagcg
     1741 gcgtccggca agatagtcgt cgaggcagcg catcaccatc gggctacgga gctggcgctg
     1801 cttgctcaag agctgcgaac gcgtgagcca atgcacagcg acgatctcct catcgagggg
     1861 cgcgacatcg gcagacggtt ccgccgtgcc gcagaacacg acgcgcagat acgtcgtccc
     1921 ggcttcctcg ctgcgccaca ggtaaaagcc gacgacgtgg ctcgggtcga agtggtggcc
     1981 ggtctcctcg atcgtctctc gcacgacagc cgtgacgagc gattcgcctt gctccaggtg
     2041 tcctgcgggc tggttcagca cgaggccgct ggccgcgcgc tcctcgacca tcaggaagcg
     2101 gccgtcgcgc tcgatgatcg cggcgacggt cacgtcgatg ccgcgcgaag ggcggcggct
     2161 atagctgtag ttgtcggact tcggcttcga tttcacacgc gttccatagc gattcgaact
     2221 tgctcaagta catgcgtgcg acggccggtt cgtaggtgtc tgacacgcca tcccaagttt
     2281 cggcgcgcgc acgatacacg agcgcctgct cgtccgctat caggaatgcc tcggggtggg
     2341 tgccgagctc gggctgcatg cgccggaact cgatataact attcaa
//
LOCUS       DATCUD010000096         3087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36546, whole genome shotgun sequence.
ACCESSION   DATCUD010000096 DATCUD010000000
VERSION     DATCUD010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36546"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..743)
                     /locus_tag="VIQ99_01400"
     CDS             complement(141..743)
                     /locus_tag="VIQ99_01400"
                     /inference="COORDINATES: protein motif:HMM:NF015506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEY9181821.1"
                     /translation="MNALRVPVAVFVGGLFTAAMFWLLWSLISTAFDVGDRAEATRIE
                     FSRMRRDTEVATKRDEKVERERPPPTPETPRMAFSAGGIENNVAQLAPIVDARGAMSR
                     MSMSAGSDRDVIPLVRINPDYPPRALSRGLEGWVQVQFTITATGTVKDPIVVNAEPKN
                     IFDDAALKAIARWRYNPKVEGGVAVERVGVQTIIRFQLEQ"
     gene            complement(765..1172)
                     /locus_tag="VIQ99_01405"
     CDS             complement(765..1172)
                     /locus_tag="VIQ99_01405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007186622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY9181822.1"
                     /translation="MQSRRHAPETEDTGIDLAPMLDFTTNLLIFFIITTSFIKEAGIT
                     VFKPSAETAINRDSGNLLIAIRENGDIWMDRRRIELRDVRPQMERLHIERPDDTVVII
                     ADKESDAGMVAKVMDEVRLAGITIVSIAADPAG"
     gene            complement(1191..1598)
                     /locus_tag="VIQ99_01410"
     CDS             complement(1191..1598)
                     /locus_tag="VIQ99_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020029266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEY9181823.1"
                     /translation="MRKRRNSGHGDQESTGIDLAPMLDFVTNLLIFFIITAVFVKESG
                     LEVNRPTSFEQNESDTESIQIQILDNGEIWVDNRAVDVRAVRANVERMSAVNPESGVL
                     ILAQEQAPTGTLVEVVDQVHLGGIYNITFTTTQ"
     gene            complement(1602..2123)
                     /locus_tag="VIQ99_01415"
     CDS             complement(1602..2123)
                     /locus_tag="VIQ99_01415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020650075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY9181824.1"
                     /translation="MLEQIPFIRGVVSLSNDGGPWVIWIFASGVLMWALIIERYWYFS
                     MVLPKQAAALQAQWLARADRTSWCARQIRTAMISRLNGSMTTGFPVMQVLVPMAPLLG
                     LIGTVSGMLEVFDSMALRGNADARSMASGVSAAMICTMTGLAVSITGLYPVHYFRTRA
                     TRETELLADKLSL"
     gene            complement(2116..>3087)
                     /locus_tag="VIQ99_01420"
     CDS             complement(2116..>3087)
                     /locus_tag="VIQ99_01420"
                     /inference="COORDINATES: protein motif:HMM:NF013760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015252 - proton channel activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY9181825.1"
                     /translation="GEPPRDEWLRAFSTARATPTATELERLWLEIQREMTASGQVAKY
                     RARVVQPGGEAVESDVIRVGPFTATADGQFLSYLPGLRTLNVLPRQLPPNFMAVARDF
                     TNATSGYARAVVDANRGVLLGLYVERPTLEERIELGEEIGYIIIIVGVIGAVAWIFQL
                     FSLVFVRLAVNKQLKNLDRPTPNNPLGRVLLAFKGDKSKIEDDADVAELRITEAVLRE
                     VPKLERFQAFLRLAVAAGPLLGLIGTVVGMIETFQSITESGSSDPKLMAAGIGKAMIA
                     TVLGLFVAIALLFANSLLNSLSRGLVQVLDEQSAGMLAESIEKQRRA"
BASE COUNT          556 a         1029 c          946 g          556 t
ORIGIN      
        1 tgtgcaaagc cggccgtgcc aaccaagaga ccggtcgcga gcaccaaccc gcgtatcatc
       61 caacgcaacg atccgttagc ttgctgttcc atggctacgt actccagctc ctatcggatg
      121 aactcaacgc caactcgcga ctactgctcg agttggaaac gaatgatcgt ctgaacgccg
      181 acccgctcga ccgcgacgcc gccctcgacc ttcgggttat agcgccagcg cgcgatcgcc
      241 ttcagcgccg cgtcgtcgaa gatgttcttc ggctcggcgt tgaccacgat cgggtccttg
      301 acggtgcccg ttgccgtgat cgtgaactgc acctgcaccc agccttcgag gccgcggctc
      361 aacgcgcgcg gcggatagtc cggattgatt cggacgagcg ggatgacatc gcggtccgaa
      421 ccggcgctca tcgacattcg cgacatcgcg ccgcgagcat cgacgatcgg cgccagctgc
      481 gccacgttgt tctcgatgcc gccggccgag aacgccatgc gcggagtctc cggcgtgggc
      541 ggcggccgct cgcgctcgac cttctcgtcg cgcttcgtcg cgacctcggt atcgcggcgc
      601 atgcgcgaga actcgattcg agtcgcctcc gctctgtcgc cgacgtcgaa cgccgtgctg
      661 atcaggctcc acaacaacca gaacatggcc gccgtgaaca ggccgccgac gaatactgca
      721 acggggactc tcaacgcgtt catgacagct ctcctccgtc ttccctagcc cgccggatcg
      781 gccgcgatcg acacgatcgt gatgccggca aggcgcacct cgtccattac cttggcgacc
      841 atgcctgcgt cggactcctt gtccgcgatg atcacgacgg tgtcgtcggg gcgttcgatg
      901 tggagccgct ccatctgtgg gcgaacgtcg cgcagctcga tgcgccggcg atccatccag
      961 atgtcgccgt tctcgcgaat cgcgatcaac aagttgcccg aatcgcgatt gatcgccgtc
     1021 tcagccgacg gcttgaacac cgtgatgccg gcctctttga tgaacgacgt cgtgatgatg
     1081 aagaagatca acaggttcgt cgtgaagtcg agcatcggcg cgaggtcgat accggtgtcc
     1141 tcggtctctg gcgcgtgtcg tcgtgactgc atggtcccta ctccggccgt ctactgcgtc
     1201 gtcgtgaacg tgatgttgta gataccgccg agatgcacct gatcgacgac ttcgaccagt
     1261 gtgccggtcg gcgcttgctc ctgcgcgaga atcagcacac cactctccgg attcacggcg
     1321 ctcatgcgct cgacattcgc gcgcacggca cgcacatcga ccgcgcggtt gtccacccag
     1381 atttcgccgt tgtccaggat ctgaatctga atgctctccg tgtccgattc gttctgctcg
     1441 aacgacgtcg gccggttgac ctcgaggccg gattccttga cgaacacggc ggtgatgatg
     1501 aaaaagatca gcaagtttgt gacgaagtcc aacatcggcg ccagatcgat gccggtgctt
     1561 tcctgatcgc cgtgtccgga gtttcttcgc ttgcgcatgg cttagaggct cagtttgtcc
     1621 gccaagagct ccgtctcgcg cgtcgctcgg gtgcggaagt aatggaccgg atacaaccca
     1681 gtgatgctga ccgcgaggcc cgtcatcgtg cagatcatgg cggcggacac gccgctcgcc
     1741 atgctgcgtg cgtcggcgtt accacggagc gccatcgaat cgaagacttc gagcatgccg
     1801 gagacggtgc cgatcaggcc gagcaacggc gccatcggca cgagcacctg catgaccggg
     1861 aagcccgtgg tcatcgaccc gttcaagcgc gagatcatgg ccgtgcgaat ctgccgcgcg
     1921 caccaggagg tgcggtcggc acgcgccagc cactgcgcct gcaacgcggc cgcttgcttc
     1981 ggcagcacca tcgagaagta ccaatagcgc tcgatgatca gggcccacat cagcacgccc
     2041 gaggcaaaga tccagatgac ccagggcccg ccgtcgttcg acagcgaaac gactccgcga
     2101 atgaacggaa tttgctcaag cacggcgttg tttctcgatg ctctccgcca acatgccggc
     2161 gctctgctcg tcgagaactt ggacgagccc gcgcgacagc gagttcaaca acgagttggc
     2221 gaacaggagc gcgatggcga cgaacaggcc gagcaccgtt gcgatcatgg ctttgccgat
     2281 accggcggcc atcagcttcg gatcgctcga gccggattcc gtgatgctct ggaacgtctc
     2341 gatcatgccg acgacggtgc cgatcaggcc cagcaacgga ccggcggcga cggcaagtcg
     2401 caagaacgcc tggaaccgct ccagcttcgg gacctcgcgc agcacggcct cggtgatccg
     2461 cagctccgca acgtcggcat cgtcctcgat cttgctcttg tcgcctttga acgccagcag
     2521 cacgcggccg agagggttgt tcggcgtcgg ccgatcgagg ttcttcagct gcttgtttac
     2581 ggcgagccgg acgaatacga ggctgaacag ctggaagatc caggccaccg cgccgatcac
     2641 gccgacgatg atgatgatgt aaccgatctc ctcgccgagc tcgattcgct cttcgagcgt
     2701 cggacgctcg acgtacaggc cgagcaggac gccgcggttg gcgtcgacca cggcgcgggc
     2761 gtagcccgac gtcgcgttcg tgaagtcgcg cgcgaccgcc atgaagttcg gcggcagttg
     2821 gcgcggcagc acgttcaacg tgcgcagtcc cggcagatac gacaggaact ggccatccgc
     2881 cgtcgccgtg aacggaccga cgcgaatgac gtccgactcc accgcctcgc cgccgggctg
     2941 cacgacccgg gcgcgatact tggcgacctg gccgctcgcg gtcatctcgc gttgaatctc
     3001 gagccagagg cgctcgagct ccgtcgcggt cggcgtggcc cgcgccgtcg agaacgcgcg
     3061 cagccactcg tcacgcggcg gctctcc
//
LOCUS       DATCUD010000097         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50740, whole genome shotgun sequence.
ACCESSION   DATCUD010000097 DATCUD010000000
VERSION     DATCUD010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50740"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /locus_tag="VIQ99_01425"
     CDS             <1..1296
                     /locus_tag="VIQ99_01425"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: protein motif:HMM:NF012532.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEY9181826.1"
                     /translation="IAHCRRKYGREAIGPYIVSMAHGPDDVLSVLLLAKWGHLGPKRD
                     AVPLDIAPLFETGEDVERAPKIMERLLKDKLYREHLRSRGDQQIVMLGYSDSHRDGGV
                     AAARWSLQKAQQALVATMQRYGVALTIFHGRGSTMSRTAGAQHEAVLAAPSGAVSGRL
                     RMTEQGESINNKYGLRGIALRTIEQVVSAVLLVSVRPPQPNPAEPRWQSIMEEIAAAS
                     RGAYQGLLSDPEDFMEYFRAATPIDVIERIGSRSERAEHVTESPGELRAAPWVFAWTQ
                     SRCLLPSWYGLGTGLKAAIDAHGEDALVEMFEQWHFFHVLLSDVATSLAIADLDIAAL
                     YSRLAGARHDKFFPAIRREYRSCVDLILRLTRQKELLEASRTLRRAIRLRNPYVDPMS
                     VLQVGLLESWRQHGRPDGAELQALTASINGIAHAMQGAG"
     gene            complement(1302..1988)
                     /locus_tag="VIQ99_01430"
     CDS             complement(1302..1988)
                     /locus_tag="VIQ99_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012487240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9181827.1"
                     /translation="MSTGEFLLRAEHLTKKVNSPEGELTILDDVTIGVPRGHTAAIVG
                     PSGAGKSTLLALLAGLDEPTSGSVWLNGAELTALDEDGRASLRNREVGFVFQSFHLLP
                     SLTAIENVLLPLELAGTANAPERARQALVDVGLDHRLRHYPKQLSGGEKQRVAIARAF
                     VSGPSLLFADEPTGNLDNKTGARILDLLFDLNKAANTTLVLVTHDLEAAGRCQHLIEL
                     AGGRVASRRG"
BASE COUNT          327 a          664 c          684 g          322 t
ORIGIN      
        1 atcgcgcact gccggcgcaa gtacggccgc gaagcgatcg gcccgtatat cgtcagcatg
       61 gcgcacggac ccgacgacgt gttgtccgtg ctgctgctcg cgaaatgggg ccacctgggc
      121 ccgaagcgcg acgccgtgcc gctcgacatc gcaccgcttt tcgagacggg tgaggacgtg
      181 gagcgtgcgc cgaagatcat ggagcgtttg ctgaaggaca agctgtatcg cgagcatctg
      241 cgctcgcgcg gcgatcagca gatcgtgatg ctcggctact cggacagcca ccgcgacggc
      301 ggtgtggcgg ccgcgcgctg gagcctgcag aaggcgcaac aggcgctcgt cgcgacgatg
      361 caacgctacg gcgtcgcgct cacgatcttc cacggtcgtg gcagcacgat gagccgtacg
      421 gccggcgcgc agcacgaggc tgtgctcgcg gcgccgagcg gcgcggtgtc gggccggctg
      481 cgcatgaccg agcagggcga gagcatcaac aacaagtacg ggctgcgcgg catcgcgttg
      541 cggacgatcg agcaggtcgt gagcgccgtg ctgctcgtga gcgttcggcc gccgcagccg
      601 aacccggccg agccgcgctg gcagtcgatc atggaagaga tcgccgctgc gagccgcggc
      661 gcgtaccagg gcctgttgtc cgaccccgag gacttcatgg aatactttcg tgccgccacg
      721 ccgatcgacg tgatcgagcg gatcggcagt cgctcggagc gcgccgagca cgtgaccgag
      781 tcgccgggcg agctacgcgc ggcgccttgg gtcttcgcgt ggacccagag ccgatgtctg
      841 ctgccgagct ggtatggtct cggcaccggt ctcaaggccg cgatcgacgc gcacggggag
      901 gacgccctcg tcgagatgtt cgagcagtgg catttcttcc acgtgctgct gtcggatgtc
      961 gccacatctc tcgcgatcgc ggacctcgac atcgctgcgc tgtactcgcg cttggccggt
     1021 gcgcgccacg acaaattctt ccccgccatt cgccgcgagt acaggagttg cgtcgatctg
     1081 atcctgcgcc tgactcgcca gaaagagctg ctcgaagcct cgcgcacgct ccggcgagcg
     1141 attcggctgc gcaaccccta cgtcgatccg atgagcgtct tgcaggtcgg cctactcgaa
     1201 agctggcgcc agcacgggcg cccggacggg gccgagctgc aagcgctgac cgcgagcatc
     1261 aacggcatag cgcacgcgat gcagggcgcg ggctgattcg tctaaccgcg cctgctcgcg
     1321 acgcgtccgc cggccagctc gatcaaatgc tggcaccggc ccgcggcttc taagtcgtgc
     1381 gtcacgagca cgagcgtcgt gttcgccgcc ttgttcaggt cgaacagcaa gtcgaggatc
     1441 cgcgcgccgg tcttgttgtc gagattgccg gtgggctcat cggcgaacaa gagcgacggg
     1501 ccgctcacga acgcgcgcgc gatcgcaacg cgctgtttct cgccccccga cagttgtttc
     1561 ggataatgcc ggaggcggtg gtcgaggccg acgtcgacga gcgcctgacg ggcgcgctcc
     1621 ggcgcattcg cggtgccggc gagctcgagc ggcaacaaca cgttctcgat ggcggtcaga
     1681 gatggcaaca gatgaaagga ctggaacacg aagccgacct cgcggttgcg aaggctcgcg
     1741 cggccgtcct cgtccaaagc cgtgagctcc gcgccgttca gccacacgct gcccgacgtg
     1801 ggctcgtcga gccccgcgag cagcgcgagc agcgtcgact tgcccgcgcc cgaaggcccg
     1861 acgatcgcgg ccgtgtgccc gcgcggcacg cctatcgtga cgtcgtcgag gatggtcagc
     1921 tcaccctcgg ggctgttaac ctttttcgtg agatgttcgg cccgtaacag gaactcgcca
     1981 gtgctcatct gccgcta
//
LOCUS       DATCUD010000098         2318 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36556, whole genome shotgun sequence.
ACCESSION   DATCUD010000098 DATCUD010000000
VERSION     DATCUD010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36556"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..239
                     /gene="rplU"
                     /locus_tag="VIQ99_01435"
     CDS             <1..239
                     /gene="rplU"
                     /locus_tag="VIQ99_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020649167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY9181828.1"
                     /translation="AAVGDAVKFDEVLVVGEGANVKVGAPLVAGGAVEGKVVSQGRED
                     KITIIKFRRRKHYRRTQGHRQPFTEVEITAISGA"
     gene            258..515
                     /gene="rpmA"
                     /locus_tag="VIQ99_01440"
     CDS             258..515
                     /gene="rpmA"
                     /locus_tag="VIQ99_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006034530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEY9181829.1"
                     /translation="MAHKKAGGSSKNGRDSESKRLGVKRFGGEQVLAGNILVRQRGTQ
                     YHAGANVRMGRDHTLYAGVPGRVAFGVKGTKGRRLVSVLAD"
     gene            598..1650
                     /gene="obgE"
                     /locus_tag="VIQ99_01445"
     CDS             598..1650
                     /gene="obgE"
                     /locus_tag="VIQ99_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEY9181830.1"
                     /translation="MKFVDEAEIRVEAGAGGRGCVSFRREKFVPRGGPDGGDGGDGGS
                     IYLVAREGINTLADFRVQRRFKAQNGGGGSGKDMTGAAGADLYVEVAKGTEVYDVDTG
                     EKLGDLTRDGERLLVAKGGQGGRGNTRFKSSVNRAPRQFDTGGAGEKRRLKLALKLLA
                     DVGLLGAPNAGKSTLTRALSAARPKVADYPFTTLHPHLGVVRVGPDRSFVIADIPGLI
                     EGAASGAGLGIRFLKHLERTRLLLHVVDACGDLSGEDVAATYRAVEGELGEYSAALAS
                     RPRWLVLNKLDLLPPRERPKRVAAIVDELDWKGPVYGLSALTADGTTRLVQDVMKYLE
                     ELRETEPTGEPSGHRA"
     gene            complement(1633..1896)
                     /gene="rpsT"
                     /locus_tag="VIQ99_01450"
     CDS             complement(1633..1896)
                     /gene="rpsT"
                     /locus_tag="VIQ99_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006002660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEY9181831.1"
                     /translation="MANIQSAKKRARQAIKRRAHNVTMRSRVRTAVRRVVKTIEAGDK
                     EAAKAAFTALVPEIDRMANKGILPKNRAAHYKSQLNAKLRAMS"
     gene            1997..>2318
                     /locus_tag="VIQ99_01455"
     CDS             1997..>2318
                     /locus_tag="VIQ99_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEY9181832.1"
                     /translation="MTSTRDPVRPPTLHVRLLKATSVVGAFTLLSRVTGLARDIAFSA
                     WFGSGLVMDAFAVAFKIPNLLRRFFAEGAFSQAFVPVIAEYRTLRGPTETRELVDRVT
                     GTLAL"
BASE COUNT          394 a          699 c          832 g          393 t
ORIGIN      
        1 ccgcggccgt cggcgacgct gtgaagttcg acgaggtatt ggtcgtgggc gagggcgcga
       61 acgtcaaggt cggcgcgcca ctcgtcgcag gcggtgccgt cgaaggcaag gtcgtctcgc
      121 agggtcgaga ggacaagatc acgatcatca aattccggcg gcgcaagcac taccggcgca
      181 ctcaggggca ccgtcagccc ttcaccgagg tcgagatcac cgcgatcagc ggcgcgtagc
      241 gcaaaaggag tagcgagatg gcacacaaaa aggcaggcgg cagctcgaag aacggccgcg
      301 attcagagtc aaaacggctc ggcgtaaagc ggttcggcgg tgagcaggtg ctcgccggca
      361 acatcctcgt gcggcagcgc ggcacgcagt atcacgccgg cgcgaacgtg cgcatgggac
      421 gcgaccacac gctgtacgcc ggtgtccccg ggcgtgtggc gttcggagtc aagggcacga
      481 aaggtcgccg cctcgtgagc gtgctcgcgg attgatcggg cccggtgagg gcgaagtact
      541 cgaagccccg catcgcgggg ctttttcgtt tctggccctt caatgcggat ttgagacatg
      601 aagttcgtcg acgaagcgga gattcgcgtt gaggccggtg ccgggggcag gggctgcgtg
      661 agctttcggc gcgagaagtt cgtgccgcgc ggggggccgg acggcggcga cggaggggac
      721 ggcggcagca tctacctcgt cgcgcgcgag ggcatcaaca cgctcgcgga tttccgtgtg
      781 cagcgacgct tcaaggccca aaacggcggt ggcggctcgg gcaaggacat gacgggcgcg
      841 gcaggagcgg acctctatgt cgaggtcgcc aagggaacgg aagtctacga cgtcgacacc
      901 ggcgagaagc tcggggatct cacgcgcgac ggcgagcggc tattggtcgc gaaaggcggg
      961 caaggcgggc gcggcaacac gcggttcaag agcagcgtga accgtgcgcc ccggcagttc
     1021 gacacgggcg gggccggcga aaaacggcgg ctcaagctcg cgctgaagct gctcgcggac
     1081 gtggggctgc tcggtgcacc gaacgcaggc aaatcgacgc tgacgcgggc gctttccgcg
     1141 gcgcggccga aggtcgccga ctatccgttc acgacgttgc atccgcatct cggtgtggtg
     1201 cgcgtcggtc ccgatcgcag cttcgtgatt gcggacattc cggggctgat cgaaggcgcc
     1261 gcatcggggg ccggcctcgg gatccgcttc ctaaagcatc tcgagcgaac tcggttgttg
     1321 ctgcacgtcg tggatgcttg cggtgatctg agcggagagg acgtcgcggc gacgtatcgc
     1381 gcagtcgaag gcgagctcgg cgagtattcc gcggcgctcg cgagccggcc gcggtggctt
     1441 gtcttgaaca agctcgatct gctgccgccg agggaacgcc cgaaacgcgt ggcggcaatc
     1501 gtcgacgagc tcgattggaa agggcccgtc tacggcctca gcgcgctgac ggccgacggc
     1561 acgacgcgcc tcgtgcagga cgtgatgaag tacttggaag aattgcgaga aacggagccg
     1621 acgggcgagc cgtcaggaca tcgcgcgtag cttggcgttg agctggctct tgtaatgtgc
     1681 ggcgcggttc ttcggcagga tgcccttgtt cgccatccga tcgatctcgg gaaccaacgc
     1741 agtgaacgct gccttggccg cttctttgtc gccggcttcg atcgttttca cgacccgacg
     1801 cacggcggtg cgcacgcgcg agcgcatcgt gacgttgtgc gcgcggcgtt tgatcgcctg
     1861 acgagcccgc ttcttcgctg actgaatgtt ggccaaggct gatttccgtg aggggcgtcc
     1921 gccccggaaa ggcggctatt attcggagcg acccatggca agtcaagcac atagctcgcc
     1981 ctagaatgcc ccgcgcatga cctcgactcg ggatcccgta cgtccgccga cgttgcacgt
     2041 ccgcctgttg aaggcgacgt ccgtggtcgg cgcgttcaca ttgctgtcgc gcgtgaccgg
     2101 ccttgcgcgc gacatcgcat tctcggcctg gttcggctcc gggctcgtca tggatgcatt
     2161 cgcggtggcg ttcaagatcc cgaacctgct tcgccgtttc ttcgccgagg gggcgttttc
     2221 gcaggcgttc gtgcccgtga tcgccgagta ccgcacgctg cgcggaccga cggagactcg
     2281 cgagctcgtg gatcgcgtga caggcactct ggcgctcg
//
LOCUS       DATCUD010000099         1895 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_93379, whole genome shotgun sequence.
ACCESSION   DATCUD010000099 DATCUD010000000
VERSION     DATCUD010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93379"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VIQ99_01460"
     CDS             <1..330
                     /locus_tag="VIQ99_01460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181833.1"
                     /translation="SIGWWEGDTLVVDSTGFNESFWLDRRGMPHTTQLHTVERFTRKD
                     SDTIEYSIKVHDPGAYTADWTGGFDLNFERGVELFEYSCQQANYAVELMVGGERSSID
                     RTSPIVP"
     gene            complement(347..1585)
                     /locus_tag="VIQ99_01465"
     CDS             complement(347..1585)
                     /locus_tag="VIQ99_01465"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011381016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vanadium-dependent haloperoxidase"
                     /protein_id="HEY9181834.1"
                     /translation="MQRRKSSCPTAVTARLALIAIAGAVTAANADVVTESNARAAEIV
                     AASGLSTPAVNRVMALVQTAVYAAANSVSRRYPDDDFDLKAVSAASIDAAIAAAQRAA
                     LSELLPSQRGATEDAYLTALRRLPDDAARKAGIAAGQRAAAAVLAARRDDGAAAPDSY
                     RPRTSPGVYIPTSGTVAPQWPARKPWLMSGAAEFRPGPPPELTSERWARDYEEIKQIG
                     SRNSPVRSAEQTAKARFWETTQPSIYYGLVHNVATQSDRDVTQNARLFAAVTQAIDDA
                     MIAVFDAKYHYGFWRPVTAIRNGDIDGNDSTGVDPAWAPFIETPLHPEYPCAHCIVAA
                     TVGAVLLGELGDKPQPIWRTVSATADGAAREWTSIEAFVQEVADARVYDGVHFRYSTE
                     VGTAMGRQIGALAVARRLRP"
     gene            1703..>1895
                     /locus_tag="VIQ99_01470"
     CDS             1703..>1895
                     /locus_tag="VIQ99_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017681786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9181835.1"
                     /translation="MKGHGQFCPVAVACEVFAHRWTPLILRELLAGSTHFNQIKRGLP
                     LISRTTLTERLRALEEAGVV"
BASE COUNT          276 a          646 c          648 g          325 t
ORIGIN      
        1 tcgatcggct ggtgggaagg cgacacgctc gtcgtcgaca gcacgggctt caacgagagc
       61 ttctggctcg atcgccgcgg catgccgcac acgacgcagc tgcataccgt cgagcggttc
      121 acgcgcaagg attcggacac gatcgagtac tcgatcaagg tccatgatcc cggcgcgtac
      181 acggccgact ggaccggcgg cttcgacctg aacttcgagc gcggcgtcga gctgttcgag
      241 tactcgtgcc agcaggccaa ctacgccgtc gagctcatgg tcggcggcga gcgttcgagc
      301 atcgatcgca cgagcccgat cgttccctga gaaacgcgac cgcgcgtcag ggccgcaggc
      361 gtcgtgccac ggccaacgcc ccgatctgcc gccccatcgc cgtgccgacc tcggtcgagt
      421 agcggaagtg cacgccgtca tagacgcgcg cgtcggcgac ctcctgcacg aacgcctcga
      481 tgctcgtcca ttcgcgcgcg gctccgtctg ccgtggcact cacggttcgc caaatcggct
      541 gaggtttgtc accgagctcg cccagcaaca ccgcgccgac cgtggccgcg acgatgcagt
      601 gcgcgcacgg atactcgggg tgcagcggtg tttcgatgaa gggtgcccag gccggatcca
      661 cgccagtgct gtcgttgccg tcgatgtcgc cgttgcggat cgcggtgacc ggtcgccaga
      721 agccatagtg atacttcgcg tcgaacacgg cgatcatcgc gtcgtcgatg gcttgcgtga
      781 cggccgcaaa gagccgcgcg ttctgtgtca cgtcccgatc cgattgtgtc gcgacgttgt
      841 gaacgaggcc gtagtagatg gagggctgtg tcgtctccca gaagcgcgct ttggcggtct
      901 gctcggcgct tcggacgggc gagttgcggc taccgatctg cttgatttcc tcgtagtccc
      961 gtgcccagcg ttcgctggtc agctcgggcg gcggtcccgg gcggaattcc gcggcgccgc
     1021 tcatcagcca cggcttgcgc gcgggccact gcggcgcaac ggttccgctc gtcgggatat
     1081 acacgccggg gctcgtgcgt gggcgatagc tgtccggcgc ggcggcgccg tcgtcgcgac
     1141 gcgccgccag caccgcggcc gccgcccgtt gaccggccgc gatgccggct ttccgcgcgg
     1201 cgtcatccgg tagccggcgc agcgccgtca gatacgcgtc ctcggtcgcg ccgcgttgcg
     1261 atggcagcag ctccgacaac gccgcgcgct gcgccgccgc gatcgcggcg tcgatcgaag
     1321 ccgcggatac agctttgagg tcgaaatcgt cgtccgggta gcgtcggctg actgagttgg
     1381 ccgccgcgta gaccgctgtt tgcaccaacg ccatcacgcg gttcacggcc ggcgtcgaca
     1441 gcccggaggc ggcgacgatc tcggccgcgc gtgcgttcga ttcggtgacg acatccgcgt
     1501 ttgcggccgt cacggctccg gcgatcgcga tcagcgcgag ccgggcagtc acggcagttg
     1561 ggcacgagct cttgcgtctc tgcatggtcg agtcctcctc gggttgccgc agggtccgcc
     1621 cgtaagacta cgtgccggcc cggtgcacgc tagtacagaa actggactgg ccggcgcggc
     1681 gctcgctcgc tacagtgccg gcatgaaggg gcacggtcag ttctgcccgg tcgccgtcgc
     1741 gtgcgaggta ttcgcacacc gctggacgcc actgatcctg cgggagctgc tcgccgggtc
     1801 gacgcacttc aaccagatca agcgcggcct gccgctgatc tctcgcacga ctctgaccga
     1861 gcgcctgcgg gcgctcgaag aggccggcgt cgtga
//
LOCUS       DATCUD010000100         2031 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_93390, whole genome shotgun sequence.
ACCESSION   DATCUD010000100 DATCUD010000000
VERSION     DATCUD010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93390"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1985)
                     /locus_tag="VIQ99_01475"
     CDS             complement(<1..1985)
                     /locus_tag="VIQ99_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011659330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Orn/Lys/Arg decarboxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9181836.1"
                     /translation="MIERSNKRMSMRALVVDDELGLSTAEGRAARALVDELKGRAIEV
                     VEATSAEDGTAAITADTAIHAVLVDWTLGTDKDHARARKFLEFIRGRNDKIPIFLMAE
                     RGDATSIPIEVMEMVDEFIWTIEDTAAFVGGRVLAAIRRYLDVLLPPLALAMMRFNQE
                     NEYSWHTPGHTGGTAFLKSPIGRIFFDYYGENLLRSDLSISVGSLGSLLDHNGPIGEH
                     EKYAARVFGAHRTYCVTNGTSMSNRVIFLAAVARDQVALCDRNCHKSIEHSLVMSGGI
                     PTYLVPLRNRYGIIGPIPPERLTKKALEAATKQNPLVTKGIDKRAVYAVITNSTYDGL
                     CYNARRVEELLDPSVDRIHFDEAWYAYARFNPLYADRHAMHGDPKDHKGPTVFATHST
                     HKLLAALSQASLLHIRDGRGAIPHSRFNESYMMQASTSPLYPIIVSNDITTAMMDGPG
                     GPTLTGESIQEAIAFRQTMGRVHRELADKKQWFFKTWNADTVKQKGKKVRFEEASPEW
                     LATDPEAWVLHPGETWHGFGDLEDGYCMLDPIKVSIVTPGVADTGGLTKSGIPATLVT
                     RYLHYRGVEVEKTTDFTILVLFSMGITKGKWGTLLNALLDFKRDYDGNAPLAQVMPGL
                     VKDSPGAYAQLGLRDLADQMFAQLKDARQTHWLAEAFS"
BASE COUNT          340 a          671 c          636 g          384 t
ORIGIN      
        1 gagaacgcct ccgcgagcca atgcgtctga cgcgcgtcct tgagctgcgc gaacatttgg
       61 tccgcgagat cgcgcaatcc gagctgcgcg taggcgccgg gactgtcctt gacgagaccc
      121 ggcatcactt gcgcgagcgg cgcattgccg tcgtagtcgc gcttgaagtc gagcagcgcg
      181 ttcaacagcg tgccccactt gcccttcgtg atgcccatcg agaacaacac caggatcgtg
      241 aaatccgtgg tcttctcgac ctcgacgccg cgatagtgca gataccgcgt gaccagcgtc
      301 gcggggatgc cgctcttcgt gagaccgcct gtgtcggcga caccgggcgt cacgatcgac
      361 accttgatcg ggtccagcat gcagtagccg tcctcgagat cgccgaagcc gtgccacgtt
      421 tcgccgggat gcagcaccca cgcctccgga tccgtcgcca gccactccgg cgaggcctct
      481 tcgaagcgaa ccttcttgcc cttctgcttg accgtatcgg cattccaggt cttgaagaac
      541 cactgcttct tgtcggcgag ctcgcgatgc acgcggccca tcgtctgccg gaacgcgatc
      601 gcctcctgaa tcgactcgcc ggtcagggtc gggccgcccg ggccgtccat catcgcagtc
      661 gtgatgtcgt tcgaaacgat gatcggatac agcggcgacg tcgacgcctg catcatgtac
      721 gactcgttga agcgcgaatg cgggatagcg ccgcgcccat ccctgatgtg tagcagcgac
      781 gcctgcgaca gcgcggcgag cagcttgtgc gtcgaatgcg tcgcgaacac cgtcggtccc
      841 ttgtggtcct tcgggtcgcc gtgcatcgcg tgccgatccg cgtacagagg gttgaaacgc
      901 gcatacgcgt accaggcctc gtcgaagtgg atgcgatcca cggacgggtc gagcagctct
      961 tcgacgcggc gcgcgttgta gcacaggccg tcgtaggtcg agttcgtgat cacggcgtac
     1021 acggcgcgct tgtcgatgcc cttcgtgacg agcggattct gtttcgtggc tgcctcgagc
     1081 gccttcttcg tcagccgctc gggcgggatc gggccgatga tgccgtagcg gttccgcagc
     1141 ggcacgagat acgtcgggat gccgcccgac atcaccaagc tgtgctcgat cgacttgtgg
     1201 cagttgcggt cgcagagcgc gacctgatcg cgcgcgacgg cggcgaggaa aatcacgcgg
     1261 ttcgacatcg acgtgccgtt cgtgacgcag tacgtgcgat gcgccccgaa cacacgcgcg
     1321 gcgtatttct cgtgctcgcc gatcgggccg ttgtgatcga gcagcgagcc caagctaccg
     1381 acgctgatcg acaggtccga gcgcaacaga ttctcgccgt agtaatcgaa gaagatccgg
     1441 ccgatcggcg acttcaagaa cgcggtgccg ccggtgtgac ccggcgtgtg ccacgagtac
     1501 tcgttctcct ggttgaatct catcatcgcc agcgcgagcg gcggcagcaa cacgtcgagg
     1561 tagcgtcgaa tcgcggccag cacgcgtcca ccgacgaacg cggccgtgtc ctcgatcgtc
     1621 cagatgaact cgtcgaccat ctccatcact tcgatcggga tgctcgtggc gtcaccgcgc
     1681 tcggccatca agaaaatcgg aatcttgtcg ttacggccgc ggatgaactc gaggaacttg
     1741 cgcgcacggg catgatcctt gtcggtgccg agcgtccagt cgacgagcac cgcgtggatg
     1801 gccgtgtcgg ccgtgatcgc cgcggtgccg tcttcggccg aggtcgcctc gaccacctcg
     1861 atcgcgcggc ctttgagctc gtcgaccagc gcccgggcgg cgcggccttc ggccgtcgag
     1921 agcccgagct cgtcgtcgac gaccagcgca cgcatgctca ttcgtttgtt gcttcgttcg
     1981 atcatctcga tttcctccct gccgccccgg cacccttact gagacaacct g
//
LOCUS       DATCUD010000101         4679 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_29448, whole genome shotgun sequence.
ACCESSION   DATCUD010000101 DATCUD010000000
VERSION     DATCUD010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4679)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4679)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4679
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29448"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1368)
                     /locus_tag="VIQ99_01480"
     CDS             complement(<1..1368)
                     /locus_tag="VIQ99_01480"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY9181837.1"
                     /translation="MAGEPEVAPVVAPEPVVVVDPLEPIVLPELEYRQPVVEPDLLVR
                     LRSGFALDLDVDDPAVVRERDWYARNQAYLDRVFQRADRYLFHIAGEIEQRGMPAELA
                     LLPIVESAFDPFAYSHGRAAGLWQIIPGTGKRLGLEQDWWLDERRDVLEATRAALDYL
                     EQLHEQFDGDWLLAVAGYNSGEGNVARALKKAAAAGRSQDFWGIKSYLPVETRTYVPR
                     LLAVAGLVADPAASGVTLPPLANKPHFDVVETGGQIDMALAAELAGIDTAALYELNAG
                     VNRWATRPDGPHRLLVPLERAEQFETALAALGERERVQWTRHRVKSGETVGGIAERYQ
                     TTPAVLREVNSLRNNTIRAGDYLMIPHATQSLDRYTQSADARAARTQSTPRNGERREH
                     VVQAGESLWSISRTYDVDVRRLASWNSMAPGDVLSVGRSLVVWTEAPAQIAATTTVEA
                     AVAHTD"
     gene            1611..2381
                     /locus_tag="VIQ99_01485"
     CDS             1611..2381
                     /locus_tag="VIQ99_01485"
                     /inference="COORDINATES: protein motif:HMM:NF019846.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9181838.1"
                     /translation="MSSESNSVTEWLATPLGRRCLANEQRLMRRALERVFGEQLLQIG
                     AWGARNAFLRYARTQRRALIDWRPGTTADILCNPEQLAVASDSVDAVLLPHTLERSAS
                     PHAVLREVDRVLRPDGVLIVLSFAPGGLWGLRHLLSSRGYPEGRDRVIREGRLRDWLE
                     LLSFDVPSATRYCHTMPIERFSQLKILPREEWAQKWLPVFSGGYMLRAQKRVQPLTPV
                     RLWRRQTRLRVVGELVEPTTRATVRVIPHPAGERPKRS"
     gene            2378..2833
                     /gene="rnhA"
                     /locus_tag="VIQ99_01490"
     CDS             2378..2833
                     /gene="rnhA"
                     /locus_tag="VIQ99_01490"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014994712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEY9181839.1"
                     /translation="MKSVEAFTDGACRGNPGPGGWGVVLRAGERVKELSGGEPHTTNN
                     RMELKAAIEALTALKQPCRVALFTDSTYVRSGITEWLPAWQARGWRTADRKPVKNQDL
                     WMALAELADRHKVSWHWVKGHAGHPENERADELANLGLDAMLDEGPKAS"
     gene            2885..3634
                     /gene="dnaQ"
                     /locus_tag="VIQ99_01495"
     CDS             2885..3634
                     /gene="dnaQ"
                     /locus_tag="VIQ99_01495"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008928525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEY9181840.1"
                     /translation="MRQIVLDTETTGLEPAAGHRVIEIGCVELVNRRPTQNRFHRYVN
                     PEREVDRAALEVHGIENEFLATQPKFAEIAREFVEFVKGAELVIHNADFDVEFLNHEL
                     RRLPDMPRNIRDCCGVLDTLALARRLHPGQRNTLDALAKRYNVDNSKRELHGALLDAQ
                     ILADIYLTMTGGQVSLSLETETSRTAVAGSVELTIDRGGLTLPVIHATPEEERAHLAM
                     LAVMAKKHPPIWREIEAAETADAARAAPAAA"
     gene            3729..>4679
                     /locus_tag="VIQ99_01500"
     CDS             3729..>4679
                     /locus_tag="VIQ99_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019362492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEY9181841.1"
                     /translation="MLRSLKDTRIGIIGLGYVGLPLAVEFGKHYPTVGFDIKKERIAE
                     LARGEDSTLETTSEELRAAKQLTYSTDRAALKSCNTFIVTVPTPVGKNNRPVLSPLKG
                     ASETVGSVLKKGDVVVYESTVYPGCTEEYCVPILEKVSGLEFNKDFFCGYSPERINPG
                     DKQHRLPNIKKITSGSTPEVGDYVDALYRTIITAGTHKASSLKVAEAAKVIENTQRDI
                     NIALINELALIFHRLGIDTEDVLKAAGTKWNFLTFKPGLVGGHCIGVDPYYLTHKAEE
                     VGYRPEIILAGRRLNDSMAEHVASRVIKLMISRNIQPSGAR"
BASE COUNT          787 a         1568 c         1587 g          737 t
ORIGIN      
        1 gtccgtgtgc gcgacggccg cttcgacggt cgtcgtcgcc gcaatctggg ccggcgcctc
       61 ggtccacacc acgagcgagc ggcctacgga aagcacgtcg cccggagcca tcgagttcca
      121 gctcgcgagc cggcgcacgt cgacgtcgta cgtgcgcgag atcgaccaca gcgattcgcc
      181 ggcttgcacg acgtgctcgc gacgttcgcc gttgcgcggc gtgctctgcg tccgcgcggc
      241 gcgcgcgtcg gcgctctgcg tgtaacggtc gagcgactgc gtcgcgtgcg gaatcatcaa
      301 gtagtcgccg gccctgatcg tgttgttgcg cagtgagttc acctcgcgca gcacggccgg
      361 cgtcgtctga tagcgttcgg cgatgccacc gaccgtctcg ccgctcttca cgcgatgccg
      421 tgtccactgc acgcgctcgc gctcgccgag tgccgccagc gccgtctcga attgctcggc
      481 ccgctcgagg gggacgagca accgatgcgg gccatcgggg cgagtggccc agcggttcac
      541 gcccgcattc agctcgtaca gcgccgccgt gtcgatgccg gcgagctcgg ccgcgagcgc
      601 catgtcgatc tggccgccgg tctcgacgac gtcgaaatgc ggtttgttgg cgagcggcgg
      661 cagcgtgacg ccggacgccg cgggatcggc cacgagcccg gcgaccgcga gcagccgcgg
      721 cacataggtc cgggtctcga ccggcagata gctcttgatg ccccagaagt cctgcgagcg
      781 gcccgcggcg gcggctttct tcagcgcgcg cgcgacgttg ccttcgccgg agttgtagcc
      841 ggcgaccgcg agcagccagt cgccgtcgaa ttgctcatgc agctgctcga ggtagtcgag
      901 cgcggctctc gtcgcctcga gcacgtcgcg gcgttcgtcg agccaccagt cctgctcgag
      961 cccgagccgc ttgcccgtgc ccgggatgat ttgccacagg ccggccgcgc ggccgtgcga
     1021 atacgcgaag ggatcgaacg cgctctcgac gatcggcaac agcgcgagct cggccggcat
     1081 gccgcgctgt tcgatctcgc cggcgatgtg gaacagatag cgatcggccc gttgaaacac
     1141 gcggtcgagg tacgcttggt tgcgcgcgta ccagtcgcgc tcgcgcacga ccgccggatc
     1201 gtcgacgtcg aggtcgagcg cgaagcccga gcgcagccgc acgagcaggt cgggctccac
     1261 gacgggctgc cgatactcga gctcgggcag cacgatcggc tcgagcggat cgacgactac
     1321 gacgggctcc ggggccacga cgggcgcgac ttccggctcg ccggccaagc cggttccgag
     1381 cgactgacac gccgcgaggc cggcgctcga gcagagcgcc agtaggggag caagggtgcg
     1441 gcgggcccgg cgctggccgt cgttgttgtt gtgcatagac ggccggggcc cgttttgcag
     1501 atgatgaccg tatcgtacag aggatggctg atggcgcaag ggcggagaac ggcgccgcgt
     1561 gatctcgcgc attgaactgt gatgccgctc tcaggcacga tcactctgcc atgagcagcg
     1621 aatcgaactc ggtcacggaa tggctggcga cgccgcttgg ccgccgctgc ctcgcgaacg
     1681 agcagcggct gatgcggcgc gctttagaac gggtctttgg cgagcaactg ctgcagatcg
     1741 gagcctgggg cgcccgtaac gcgttcctgc gctacgcgag gacgcagcgc cgcgcgttga
     1801 tcgactggcg gcccggcacg accgccgaca tcctctgcaa cccggagcag ctcgccgtcg
     1861 cgagcgactc cgtggatgcc gtgctgctgc cgcacacgct ggagcgcagc gcctcgccgc
     1921 acgccgtgtt gcgcgaggtc gaccgcgtgc tgcgccccga cggcgtactg atcgtgctga
     1981 gcttcgcgcc cgggggcttg tggggcttgc ggcacttgct ctcgagccgc ggctaccccg
     2041 agggccgcga ccgcgtaatc cgcgaaggaa ggctccgcga ttggctcgag ctcttatcgt
     2101 tcgacgtgcc gtcggcgacg cgttactgcc acaccatgcc gatcgagcgg ttcagccagc
     2161 taaagatcct gccgcgcgag gaatgggcgc agaagtggct ccccgtattc agcggcggct
     2221 acatgctgcg tgcgcagaag cgtgtgcagc cgctgacacc ggtccgcttg tggcgccgcc
     2281 agacgcggct ccgcgtcgtc ggcgagctcg tggagccgac cacgcgtgcc acggtgcgcg
     2341 tgattccgca tccggccggc gagcgaccca agcgctcgtg aagtccgtcg aggcgttcac
     2401 cgacggcgcc tgtcgcggca atccgggccc gggcgggtgg ggcgtggtcc tgcgcgccgg
     2461 cgagcgtgtc aaagagctct ccggcggtga accgcacacg accaacaatc gcatggagct
     2521 caaagccgcg atcgaagcgt tgacggcgct gaaacagccg tgtcgtgtcg cgctgttcac
     2581 ggattcgact tacgtccgca gcggaatcac cgagtggctg ccggcctggc aggcacgcgg
     2641 ctggcgcacg gcggatcgca agcccgtgaa gaaccaggat ctgtggatgg cactggccga
     2701 gctcgcggat cggcacaagg tgagttggca ctgggtcaag ggccacgccg gccatcccga
     2761 gaacgagcgt gccgacgagc tcgccaacct cggtctcgac gcgatgctcg acgaggggcc
     2821 gaaggcgagt tgattttgcg gccgcgtccg tcaagatagg attttccaac gagcaccggt
     2881 tttgatgcgt cagatcgttc tcgataccga aaccacgggt ctcgagcccg ccgcgggcca
     2941 ccgggtcatc gagatcggtt gcgtcgagct cgtgaatcgc cgcccgaccc agaaccgctt
     3001 ccatcgctac gtgaatcccg agcgcgaggt cgatcgcgcc gcgctcgaag tgcacggcat
     3061 cgagaacgag ttcctcgcga cgcagcctaa gttcgccgag atcgcgcgcg agttcgtcga
     3121 gttcgtgaaa ggcgcggagc tcgtgatcca caacgccgac ttcgacgtcg agttcctgaa
     3181 ccacgagctc aggcgcctgc cggacatgcc gcgcaacatc cgcgattgct gcggcgtgct
     3241 cgacacgctc gcgttggcgc ggcggctgca ccccggtcaa cgcaacacct tggacgcgct
     3301 cgcgaaacgc tacaacgtcg acaactcgaa gcgcgagctg cacggagcgc tgctcgacgc
     3361 gcagatcctc gccgacatct atctcacgat gacgggcggg caagtcagct tgtcgctcga
     3421 gaccgagacg tcgcggacgg ccgtggccgg atcggtcgag cttacgatcg atcgcggtgg
     3481 cctcacgctg ccggtgatcc atgcgacgcc cgaggaggag cgtgcccacc tcgcgatgct
     3541 ggccgtcatg gccaagaagc acccgccgat ctggcgcgag atcgaagccg ccgagacggc
     3601 cgatgcggct cgggccgcgc ctgcggccgc gtagctgcgc cacgaccctt cccggggtgt
     3661 gatttgactc cctgcgcgcc gccttaccac gcgggtagaa tcgcggatcg aattcgatag
     3721 gaggcgcgat cttgcgctcg ttgaaggaca cccgcatcgg catcatcggc ttgggctacg
     3781 tcggcctgcc gctcgcggtc gagttcggta agcattaccc gaccgtcggc ttcgacatca
     3841 agaaggaacg catcgccgag ctcgcgcgcg gcgaggactc cactctggag acgacgagcg
     3901 aggagctgcg cgcggccaag caactcacgt actcgacgga tcgcgccgca ctgaagtcct
     3961 gcaacacgtt catcgtcacg gtgccgacgc cggtcggcaa gaacaatcgg cccgtgctct
     4021 cgccgctcaa gggtgcgagc gaaaccgtcg gcagcgtgct caagaagggc gatgtggtcg
     4081 tgtacgagtc caccgtgtat cccgggtgca ccgaggagta ttgcgtgccg atcctcgaga
     4141 aagtctcggg gctcgagttc aacaaagact tcttctgcgg ctacagcccg gagcgcatca
     4201 atcccggcga caagcagcat cgcctgccga acatcaagaa gatcacgtcg ggctcgacgc
     4261 ctgaggtcgg cgactacgtc gacgcgctgt atcgcacgat catcacggcc ggtacgcaca
     4321 aggcgtccag cttgaaggtg gccgaagccg ctaaggtcat cgagaacacg cagcgcgaca
     4381 tcaacatcgc gctgatcaac gagctggcgc tgatcttcca tcggctcggt atcgataccg
     4441 aggacgtcct gaaggccgcc ggcacgaagt ggaacttcct gacgttcaag ccggggctcg
     4501 tcggcgggca ctgcatcggc gtcgacccgt actatctcac gcacaaggcc gaggaggtcg
     4561 gctaccggcc cgagatcatc ctggccggcc gacgactcaa cgacagcatg gccgagcacg
     4621 tggcgtcgcg cgtgatcaag ctcatgatca gccgcaacat ccagccgtcc ggtgcacgc
//
LOCUS       DATCUD010000102         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43609, whole genome shotgun sequence.
ACCESSION   DATCUD010000102 DATCUD010000000
VERSION     DATCUD010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43609"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VIQ99_01505"
     CDS             complement(<1..388)
                     /locus_tag="VIQ99_01505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase"
                     /protein_id="HEY9181842.1"
                     /translation="MNTLSLDLQLLNAIAALFLLLAFGMLSQRRVVTLVKLLAIQAAL
                     LCAATLLLAWRTGETHLYLSALLTLVLKVLFLPWLLNRLIKRLGVYWDSEPLLAIHGT
                     MLVGLLMVIFSFGLAQPIVALASTATR"
     gene            complement(393..1346)
                     /locus_tag="VIQ99_01510"
     CDS             complement(393..1346)
                     /locus_tag="VIQ99_01510"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEY9181843.1"
                     /translation="MNALVWLTQFTEVLLAVAAAPLFAGWVAQCRAVLQNRTPPSVWL
                     PYRNLHKLFLKEAVLAEHASPLFRTAPYLVFGSMICAAAIVPSTGTRLPFSTAADAIA
                     LVGLLATARVFMSLAAMDIGTAFGTLGARREMMVGFLAEPALLIVIFVASLISHSTAL
                     PVIAEQLATGSFALYPSLAFTAVAFALVLLAENARLPVDNPATHLELTMIHEAMLLEY
                     SARHLALMEWSAALKLFNYACIGIALFVPWGAATSDAPTVGALLAAIPALALKLAAGG
                     VVLAVAETAVAKLRVLRVPELLASAFLLAVLGLLVHLLLQG"
     gene            complement(1343..>2773)
                     /locus_tag="VIQ99_01515"
     CDS             complement(1343..>2773)
                     /locus_tag="VIQ99_01515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEY9181844.1"
                     /translation="GSWRFTFDAMRVAELSPFWASGAFLLAMVGFGAKAGLVPMHVWL
                     PEAHPAAPSPVSALMSGVMLKTAVYGMLRVSFDLLEDPLWWWGLVTMSLGLFSAIYGI
                     VFAAAQTDMKRLLAFSSIENIGLLFTGLGLSLTFHAAGMNAPASLALVAVLYHALNHS
                     FMKSLLFVGTGAVLHATGQRNLGRLGGLIRRMPWVAWLTLIGALAIAGLPPLNGFVSE
                     WLLLQAFLSSHEVPQLFLNMLLPLGAAIVVLAAALAGYVMVKFFGVVFLGQPREATLA
                     DAHDAGWRERTGMIWLAAGCILFGLLPTHVIAVLELVPRQFGMLVPGAPASSWWLLEP
                     VAGRAASYSPSIFFAIVALSVVATIFVVSRIYRRRVRRSAPWDCGFVRLDSRMQDTAE
                     GFGQPIRHIFQPFFGMHRELPSPTDPTPRYRVVITDRIWTGVYVPVAALVERLTQTVT
                     WLQQGRISTYLIYSLATLLVLLGFVL"
BASE COUNT          591 a          890 c          930 g          362 t
ORIGIN      
        1 tgcgcgtcgc cgtgctcgcg agcgccacga tcggctgggc caagccgaac gagaagatca
       61 ccatgagcag tccgaccagc atcgtgccgt ggatggcgag caggggctcg ctgtcccagt
      121 agacgccgag acgcttgatc aaacggttca agagccacgg caggaacagg accttcaaga
      181 ccaatgtcag cagtgcagac aggtagaggt gtgtctctcc ggtgcgccaa gccaacagaa
      241 gcgtggcggc gcagagtaac gcggcttgga tggccagtag cttcacgagc gtgaccacgc
      301 gccgttgcga cagcatgccg aatgcgagca gcagaaatag cgcggcaatc gcgtttagga
      361 gttgcaggtc gagcgacagc gtgttcatgg gactaccctt gaagcaacag gtgcacgagc
      421 aggcccagga ccgccagcaa aaacgccgac gcgagcagct cggggactcg caggacgcgc
      481 agctttgcca cggccgtctc ggcgaccgcg agaacgacgc cgcccgcggc caacttcaga
      541 gcgagcgcgg gtatcgctgc gagcagcgcg cccaccgtcg gtgcatcgct cgtggcggct
      601 ccccagggca cgaacagggc gataccgatg cacgcgtagt tgaacaactt cagcgcggcg
      661 gaccactcca tgagcgccag gtgccgcgcc gagtactcga gcagcatggc ctcgtgaatc
      721 atcgtgagct cgagatgcgt cgcgggattg tcgaccggca agcgcgcgtt ctccgcgagc
      781 aagacgaggg cgaacgcgac ggccgtgaac gcgaggctcg gatagagtgc gaacgacccc
      841 gtcgcgagct gctcggcgat cacgggtaga gccgtgctgt gcgagatcag cgacgcgacg
      901 aagatcacga tcaggagcgc cggctcggcc aggaaaccca ccatcatttc gcggcgggca
      961 cccagcgtgc cgaacgccgt gccgatgtcc atggccgcca gcgacatgaa gacgcgtgcc
     1021 gtcgcgagca agccgaccaa cgcaatcgcg tcggcggccg tcgagaacgg caaccgcgtc
     1081 ccggtcgatg gcacgatcgc ggcggcgcaa atcatcgacc cgaacacgag atagggcgca
     1141 gtgcgaaata gcggtgaggc atgctcggcc agcacggcct ccttcaagaa cagcttgtgg
     1201 aggttgcgat agggcagcca cacgctcggt ggtgtacggt tctgcagcac ggcgcgacat
     1261 tgcgccaccc agccggcgaa cagcggggcc gcggcgaccg ccagcaatac ctcggtgaac
     1321 tgcgtgagcc agacgagggc gttcacagca cgaaccccag cagcacgagc agcgtcgcca
     1381 ggctgtagat caagtacgtc gagatccggc cctgttggag ccaggtcacg gtttgtgtga
     1441 gccgttccac gagcgctgct accggtacgt agacaccggt ccagatccgg tcggtgatga
     1501 cgactcggta gcgcggggtc gggtcggttg ggctcggcag ctctcgatgc atgccgaaga
     1561 aaggctgaaa tatgtgccgg atcggttggc cgaacccttc ggccgtatcc tgcatgcgcg
     1621 agtcgaggcg aacgaaaccg cagtcccatg gcgccgagcg gcgcacgcgg cggcgataga
     1681 tgcggctcac gacgaaaatt gtcgcgacga cgctgagcgc gacgatcgcg aagaatatcg
     1741 acggcgagta ggaggctgca cgaccggcca cgggctcgag cagccaccag ctgcttgccg
     1801 gggccccggg cacgagcatg ccgaattgcc gtggcacgag ctcgagcacg gcgatcacgt
     1861 gcgtcggcag caggccgaag aggatgcagc ccgccgcgag ccagatcatc ccggtgcgtt
     1921 cgcgccaccc ggcgtcgtgg gcatcggcca gcgtcgcttc gcgcggttgg cccaggaaga
     1981 ccacgccgaa gaacttcacc atcacgtagc ccgcgagcgc ggcggcgagc acgacgatgg
     2041 ccgctccgag cggcagcagc atgttcagga acagttgcgg cacttcatgg ctcgacagaa
     2101 atgcctgcaa cagcagccac tccgagacga aaccgttcaa cggcgggagg cctgcgatcg
     2161 cgagagcgcc gatcagagtc aaccacgcga cccacggcat gcggcggatc aggccgccga
     2221 ggcggccgag gttgcgctgt cccgtcgcgt gcagcaccgc gcccgtgccg acgaacaaca
     2281 ggctcttcat gaacgaatgg ttcagcgcgt gatagagcac ggcgaccagc gcgagcgaag
     2341 ccggcgcgtt cattcccgcg gcgtggaacg tcagggagag cccgagcccg gtgaacaaaa
     2401 gaccgatgtt ctcgatcgac gagaacgcga gcagacgctt catatcggtc tgggccgccg
     2461 cgaacacgat gccatagatg gccgagaaga gcccgaggct catcgtgacc aagccccacc
     2521 accagagagg atcctcgagc aagtcgaagc tgacccgcag catcccgtac acggccgtct
     2581 tcaacatcac gcccgacatc agtgccgaaa ccggcgacgg cgcagcgggg tgggcttcgg
     2641 gcagccagac gtgcatcggc acgagcccgg ctttcgcgcc aaagccaacc atggcaagta
     2701 ggaacgcccc cgaagcccag aacggtgaca gctccgcgac gcgcatcgcg tcgaacgtga
     2761 accgccaact gcc
//
LOCUS       DATCUD010000103         2340 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8114, whole genome shotgun sequence.
ACCESSION   DATCUD010000103 DATCUD010000000
VERSION     DATCUD010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8114"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1928
                     /locus_tag="VIQ99_01520"
     CDS             <1..1928
                     /locus_tag="VIQ99_01520"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9181845.1"
                     /translation="KTEADARDDTVEWLTLSGSLAQTRYSPAKQVDAENFALLKTAWV
                     WDGASFGARSGRATPSYMNGKLITVAGDRRYVVALDPKTGETLWSYREPHTGRYEYSM
                     RKDYGKGVAYAEIDGRGVVYITSPAFFLTALDADTGAPLEGFGKPVPVEGFPTTGVVD
                     LLADLGHPYDPYDGIPLARGYITASSPPIVVNGVVIVGNSAEQGYNQSRIENVPGDIL
                     AYDAVTGKFLWKFNVIPRPGEFGHETWENDAWSFTGDVSSWAPMAADAERGIVYVPTN
                     GATLDFFGGFRPGDNLFSTSLLALDVRTGKRVWHYQLVHHDIWNYDTPTAPVLLDVRQ
                     NGRTVPAIVQVTKQAFAYAFNRETGEPLWPIVERAVPASRIPGEKLSATQPFPTKPAP
                     YDMQGLTHDDLVDYTPELRRMAIEAIAEYEIGPLFNPPLHRDNDLGLRGSLWCPGDVG
                     GTNIDGPAAADPETGILYVTSRKGCTSRLIAPGAERDRIEPKQTGKTIAAYAVLRPQG
                     PRGPADLPLFKPPYSRITAIDMNTGEHLWWIPVGETPDRVRNHPLLKGVGVGETGTGR
                     VATMTVTPALLIYQGEAGDGTPHLYAVDKRTGKQVGKVPIPGVTSYGMMTYVHEGRQY
                     IMLQTGPTLTALALPED"
     gene            1937..2332
                     /locus_tag="VIQ99_01525"
     CDS             1937..2332
                     /locus_tag="VIQ99_01525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9181846.1"
                     /translation="MAARPKVISASALAMACSAAFAGDITTGDGAFTSAQAERGKQVY
                     DEFCSSCHQVDFYETKLAAWQDASVGELFAALSATMPSANPGGLTSAKYLDVLAYIFS
                     ITGSPAGNDELSLRSMDAVRIVAPAVQPR"
BASE COUNT          419 a          779 c          772 g          370 t
ORIGIN      
        1 tcaagaccga ggcggacgcc cgcgacgaca cggtcgagtg gttgacgctg agcggcagcc
       61 tcgcgcaaac ccgctattcg ccggccaagc aagtcgacgc cgagaacttc gcgcttctca
      121 agaccgcgtg ggtctgggac ggcgcgagct tcggcgcgcg cagcggccgc gcaacgcctt
      181 cctacatgaa cggcaagctc atcacggtcg cgggcgaccg gcgctatgtc gtcgcgctgg
      241 atccaaagac cggagagacg ctctggtcgt atcgcgagcc gcacacgggg cgctacgagt
      301 actcgatgcg caaggactac ggcaaagggg tcgcgtacgc cgagatcgat gggcgcggtg
      361 tcgtctacat cacgagcccg gcgtttttcc tgacggcctt ggatgcggat actggcgcgc
      421 ccctcgaagg tttcggcaag cccgtacccg tagaagggtt cccgacaacc ggtgtcgtcg
      481 atctgctcgc ggatctcggc catccgtacg atccgtacga cgggatcccc ctcgcacgag
      541 gctacatcac cgcgtcctcg cctccgatcg tcgtcaacgg cgtcgtgatc gtcggcaact
      601 cggccgagca gggttacaac caatcgcgca tcgagaacgt gcccggcgac atcctggcct
      661 acgacgccgt gacggggaaa ttcctctgga agttcaacgt gattccacgg ccgggcgagt
      721 tcgggcacga gacgtgggag aacgacgcgt ggagctttac cggcgacgtt tcttcctggg
      781 caccgatggc cgcggatgcc gagcgcggga tcgtctacgt tccgaccaac ggggcgacgc
      841 tcgacttctt cggcggcttc cggccgggcg acaacctctt cagcacgagc ctgctcgcgc
      901 tcgacgtgcg cacgggcaag cgcgtctggc actaccaatt ggtgcaccac gacatctgga
      961 attacgacac gcccacggct cccgtgctgc tcgacgtgcg gcaaaacggg cgaacggtcc
     1021 ccgcgatcgt gcaggtcacg aagcaagcgt tcgcgtacgc gttcaaccgc gaaaccggcg
     1081 agccgctttg gccgatcgtc gagcgtgcgg tgcccgcctc gcgcatcccg ggcgaaaagc
     1141 tctcggcgac gcagccgttc cccacgaagc ccgcgccata cgacatgcaa gggctgacgc
     1201 atgacgacct cgtggattac acgcccgagc tccgccgaat ggccatcgag gcgatcgccg
     1261 agtacgaaat cgggccgctc ttcaatccgc cgctgcaccg ggacaacgat cttgggctgc
     1321 gcggatcgct gtggtgcccc ggagacgtcg gcggaaccaa tatcgacggt cccgccgcgg
     1381 cggatccgga gacgggcatt ctctatgtca cgtcgcgcaa gggctgcacc tcacggctga
     1441 tcgctccggg cgccgagcgc gatcggatcg agcccaagca gaccggcaag acgatcgccg
     1501 cctacgccgt gctgcgcccg caagggccgc gaggtccggc ggatctgccc ctgttcaagc
     1561 cgccgtacag ccggatcacg gcgatcgaca tgaacacggg cgagcacctg tggtggatcc
     1621 cggtcggcga gacgcccgac cgcgtgagaa atcatccgtt gcttaagggt gtcggcgtcg
     1681 gtgaaacggg cacgggtcgt gtggcgacga tgaccgtcac gccggcgttg ctgatctatc
     1741 agggcgaggc cggcgacggc acgcctcatc tgtacgcagt cgacaagcgc acagggaagc
     1801 aggtcggcaa ggttcccatc cccggcgtca cgagctacgg catgatgacc tacgtgcacg
     1861 aagggcggca gtacatcatg cttcagaccg ggccgacgct cacggcgctg gcgctgcccg
     1921 aggactagga gcacgtttgg cggctcgacc gaaggtcata agcgcgagcg cgctcgcgat
     1981 ggcgtgcagc gccgcgttcg ccggtgacat tacgacgggc gacggcgctt tcacatctgc
     2041 ccaagccgag cgcggcaagc aggtgtatga cgagttctgc tcgagctgcc atcaagtcga
     2101 tttctacgag accaagctcg cggcttggca ggacgcgtcg gtcggcgagc tgttcgcggc
     2161 gctcagcgcc acgatgccgt cggcgaaccc gggcggtctc acgagcgcga agtacctcga
     2221 cgtgctcgcg tatatcttct cgatcaccgg atcgccggcc ggcaacgacg agctgtcgct
     2281 ccgcagcatg gacgcggtcc ggatcgtcgc gcccgccgtg cagccgcggt agtcggcttt
//
LOCUS       DATCUD010000104         1568 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65027, whole genome shotgun sequence.
ACCESSION   DATCUD010000104 DATCUD010000000
VERSION     DATCUD010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65027"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..692)
                     /locus_tag="VIQ99_01530"
     CDS             complement(66..692)
                     /locus_tag="VIQ99_01530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9181847.1"
                     /translation="MTRRLASLLITIALAGAELGSLAQDRMPPLPTAELTEEQAKALA
                     DFAAARGQPTGPWIALLRSPELMTRTRGLSDYLRFESIVPGWLREFVILMTARQWGQN
                     YEWNAHYPLAIDEGLSPDIARAIADGRRPEGMVLEEEILYDFVMELQHNHGVSDATYE
                     RAVDRFGEQGVIEIVSLMGYYTMISLILNTSRAPLPEGAAPALAPFPY"
     gene            complement(689..1105)
                     /locus_tag="VIQ99_01535"
     CDS             complement(689..1105)
                     /locus_tag="VIQ99_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011236013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9181848.1"
                     /translation="MTRTANAALAFGVAALAGAALAQEPADYQGTFPIAAWSRTTAAI
                     EDSGSAVERGAAVFNNWCSACHSRGPQDAPGTTSLQIKYQGSVPAALEDRTDLTSEVI
                     KVFVRNGVAMMAPFRKVEVSDADLDALAAYLTRARR"
     gene            complement(1102..>1568)
                     /locus_tag="VIQ99_01540"
     CDS             complement(1102..>1568)
                     /locus_tag="VIQ99_01540"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9181849.1"
                     /translation="NLFGSRNAPGAPPLEGHMDFSPMIPPHGEELIALTDYTGKVYAD
                     QGFTPSFVGGLMFHPRTMICFHAVPTFRNAADNARTRRLFETLVRGCAERGWPIYRIH
                     PVFQKLGMEMFGYNDGALHRLHETLKDAIDPNGIVSPGRYDIWPRRLRGTRA"
BASE COUNT          250 a          541 c          520 g          257 t
ORIGIN      
        1 ctcgcaatgc gccgcggcgt cagaggacgc tcggagccca agcggtaggg ccgcaatgcg
       61 gaacgtcaat atggaaacgg agcgagcgcg ggtgccgcac cctcgggtag cggcgcccgc
      121 gaagtgttca ggatcagcga gatcatcgtg tagtagccca tcaggctcac gatctcgatc
      181 acgccttgct cgccgaaccg atccacggcc cgttcgtagg tcgcgtcgct aacgccgtgg
      241 ttgtgctgca gctccatgac gaagtcgtag aggatttcct cttctaggac catgccctcg
      301 ggacggcggc cgtccgcgat cgcacgcgcg atgtccggcg agagcccctc gtcgatcgcg
      361 agcggatagt gcgcgttcca ttcgtagttc tgcccccact gccgggccgt catcaagatc
      421 acgaactcgc gcaaccaacc ggggacgata ctttcgaatc gcaggtaatc gctcaagccg
      481 cgcgtgcgtg tcatgagctc cgggctccgg agcagcgcga tccagggtcc cgtcggctgg
      541 ccgcgcgcgg ccgcaaaatc tgccagcgct ttcgcctgct cctcggtgag ctcggccgtc
      601 ggtagcggcg gcattcgatc ctgagccaag ctgccgagct cggcgccggc aagcgcgatc
      661 gtgatcagca ggctcgcgag cctccgcgtc accggcgcgc ccgcgtcagg tacgccgcga
      721 gcgcgtcgag atcggcgtcg ctgacctcga ccttgcggaa cggcgccatc atggcgacgc
      781 cgttgcgcac gaagaccttg atcacctcgg acgtcagatc ggtccggtcc tcgagcgcgg
      841 ccggcacgct gccctggtac ttgatctgca acgacgtggt ccccggcgcg tcctgcggcc
      901 cgcgcgagtg acaggcgctg caccagttgt tgaacacggc tgcgccacgc tcgacggccg
      961 agccgctgtc ttcgatggcc gccgtcgtgc ggctccacgc cgcgatcgga aacgtccctt
     1021 ggtagtccgc cggctcctgc gcgagcgcag cgcccgcgag tgctgccacg ccgaacgcga
     1081 gcgcggcgtt cgcggtgcga gtcatgcgcg cgtcccccgc agccgccgcg gccagatgtc
     1141 gtagcggccc ggcgagacga tgccgttcgg atcgatcgcg tccttcagcg tctcgtgcaa
     1201 gcgatgcagc gcgccgtcgt tgtaaccgaa catctccatg ccgagcttct ggaacacggg
     1261 atggattcga tagatcggcc agccgcgttc cgcgcagccg cgcacgagcg tctcgaacag
     1321 cctgcgcgtg cgcgcgttgt cggcggcgtt ccggaacgtc ggcaccgcgt ggaagcagat
     1381 catcgtgcgc gggtggaaca tcaacccgcc gacgaacgac ggcgtgaagc cctgatccgc
     1441 gtagaccttg cccgtgtagt ccgtgagcgc gatcagctcc tcgccgtgcg gcggtatcat
     1501 cggcgagaaa tccatgtgcc cctcgagcgg cggagcgcct ggcgcgttgc gcgagccgaa
     1561 caagttca
//
LOCUS       DATCUD010000105         2161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8139, whole genome shotgun sequence.
ACCESSION   DATCUD010000105 DATCUD010000000
VERSION     DATCUD010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8139"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1395)
                     /locus_tag="VIQ99_01545"
     CDS             complement(<1..1395)
                     /locus_tag="VIQ99_01545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014194016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEY9181850.1"
                     /translation="MTKESARLEEARTGKAEWRKWGPYLSERQWGTVREDYSDSGDAW
                     NYFSHDQARSRAYHWGEDGLAGISDDEQRLCFALALWNGKDPILKERLFGLTNSEGNH
                     GEDVKEYYFYLDSTPTHSYMKYLYKYPQRAYPYEEIVRHGKERGRRDMEYELIDTGVF
                     DGDRYFDVFVEYAKASPEDVLVAITVANRGPEAASLHVLPTVWFRNTWSWPGSTGQRP
                     LLRAVRESGEGGTLVASHPQLGERYVHNAGPASWLFTENETNSERLGLGPNASRYVKD
                     GINDHVVQGSEGVINPEKCGTKAAAHYTVTVAPGRSETIRLRLCDADANGRPRKERDA
                     FADFDALLEQRRMEADAFYATVIPRSLSPDAARVMRQALAGMLWSKQFYLYDVSRWLT
                     ERGAARDGRPASRNDRWRHMRNADIISMPDKWEYPWYAAWDLAFHVLALTLVDDDFGK
                     DQLDVVLRGSYLHPS"
     gene            complement(1392..1700)
                     /locus_tag="VIQ99_01550"
     CDS             complement(1392..1700)
                     /locus_tag="VIQ99_01550"
                     /inference="COORDINATES: protein motif:HMM:NF015069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET family transporter"
                     /protein_id="HEY9181851.1"
                     /translation="MHDTASLLVPRLQRSEVVGLVAGFGTTFAAFPDLIAMLRRRSSA
                     GMNPRMAGIMGVFQILWVYYGLLILSRPVIVWNIVAVLINFLSVGAYFYFRGKEVKRI
                     "
BASE COUNT          408 a          718 c          650 g          385 t
ORIGIN      
        1 gctcggatgc aggtaactgc cgcgcagcac tacgtcgagc tgatccttgc cgaagtcgtc
       61 gtcgaccagt gtcagcgcga gcacgtggaa agcgaggtcc cacgccgcgt accacggata
      121 ctcccatttg tcgggcatcg aaatgatgtc ggcgttgcgc atgtgccgcc accggtcgtt
      181 ccgcgacgcc gggcggccat cgcgggccgc accacgctcg gtgagccatc gactgacgtc
      241 gtagaggtag aattgcttcg accacagcat gcccgcaagc gcttgcctca tcactcgcgc
      301 cgcatctggc gacaacgacc gcggtatcac ggtcgcgtag aaagcgtcgg cctccatgcg
      361 ccgctgctcg agcagtgcgt cgaaatccgc gaacgcgtca cgctcctttc tcggacggcc
      421 gttcgcatcc gcatcgcaga gtcgcaaacg aatcgtctcc gagcgccccg gcgcgaccgt
      481 aaccgtgtaa tgtgcggccg ccttcgtgcc gcacttctcc gggttaatga cgccctcgct
      541 tccctgcacg acgtggtcgt tgatgccatc cttgacgtaa cgcgacgcgt tcggccccag
      601 gccgaggcgc tccgagttcg tttcgttctc ggtgaacagc cacgacgccg ggccggcatt
      661 atgcacgtac ctctcgccga gctggggatg gctcgcgacg agcgtgccac cttcgccgct
      721 ttcgcgcacc gctcgcaaca gtggccgctg gccggtcgag cccggccagg accaggtgtt
      781 gcggaaccaa acggtcggca gcacgtgcaa cgatgcggcc tccgggccgc gattcgccac
      841 agtgatggcg accaagacgt cctcgggcga ggccttcgcg tattcgacga acacgtcgaa
      901 atagcggtcg ccgtcgaata cccctgtatc gatcagctcg tactccatgt cacggcgccc
      961 gcgctccttg ccatggcgca cgatctcctc gtacggatac gcacgctgcg gatacttgta
     1021 gagatacttc atgtacgagt gagtcggggt cgagtcgagg tagaagtaat actccttgac
     1081 gtcctcgccg tgattgccct cgctgttcgt gagtccgaac aggcgctcct tgagtatcgg
     1141 gtccttgccg ttccagagcg cgagcgcgaa acacaatcgt tgctcatcgt cggaaatacc
     1201 ggcgaggccg tcctcgcccc agtgataggc gcgcgagcgc gcctgatcgt ggctgaagta
     1261 attccacgcg tcgccgctgt cactatagtc ctcgcgtacg gtgccccatt gtcgctcgct
     1321 gagatagggt ccccacttac gccattcggc tttgcccgtg cgtgcttctt cgaggcgcgc
     1381 gctttctttc gtcatatccg tttaacctct ttgccgcgaa agtagaaata cgcgccgacg
     1441 ctcaggaagt tgatcaacac cgcgacgatg ttccacacga tcacggggcg agacagaatc
     1501 agcagaccgt aataaaccca gaggatctgg aagactccca tgattccggc catgcgcggg
     1561 ttcatgccgg cgctcgaccg ccgcctcaac atggcgatca ggtcaggaaa cgccgcgaac
     1621 gtcgtgccga atccggccac gaggccgacg acctcggagc gttgcaggcg gggaacgagc
     1681 aggctcgccg tatcgtgcac gacgagccct gcacaggcag agagcacgag ggccccaagg
     1741 accaaaaaag cacagcgcga cacgacgcga gccagcgggc tcagcggtgc agaccccgac
     1801 gctctcgacg cacgccgcac gttgcaaatc ctccgcttgg cggtgagcgt cacgatcacg
     1861 ccacgccgct gcgcgtgcaa ttacggaatc tacgagcacc ggcggcgacg acacgttggc
     1921 acggcgcagg aatgtcgcgc aacgtgacct tggtcagcga taagtacgca cgaagcgacc
     1981 tggatcagcg cgctgacccc atcgactaga cgataggccg aagccgtagg tcgatccggc
     2041 ggccgatccg gagcggcctc ggctactcga gcggtggcag gccgagatgc tcccgaatcg
     2101 ccggacggac gccattgacg ttcgccacga ttagattctg cagtcgctct atcgcctctt
     2161 c
//
LOCUS       DATCUD010000106         1632 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50839, whole genome shotgun sequence.
ACCESSION   DATCUD010000106 DATCUD010000000
VERSION     DATCUD010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1632
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50839"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1632)
                     /locus_tag="VIQ99_01555"
     CDS             complement(<1..>1632)
                     /locus_tag="VIQ99_01555"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY9181852.1"
                     /translation="VQGNEIVVATTTAVDWQRVLDSAAEQGDTFLVRGATEATAATGA
                     RAAVLEHPGVTVVTLRFLDEAFAKRLSERVGIAIGILDYESYRPGEGPLAVIDTDALA
                     QNEPVAAYVEELDAYVASLPVAASTAETVALIQAVLPAADVDSPVTGIAATMLLVAVL
                     IAALATGGAVLVGRYWISVVERLTEAAHRMGTGDLAASFPIGGGKELSTLGSTMEQMR
                     RNLIELTSEVRRREAEAQAVLGGIIEGVYAVDHDRRIRFLNPQAERLLKVASAQALGA
                     FCGDVLKPQRDAQGRRPCEHSCPILAARRTGSGLAVERVVPVDDDVRRVVISSAAPAD
                     PDGLQVQVLRDETELEAVRRTRDSMLANISHEFRTPLAAQLASIELLRDGIGTLEPDA
                     QRQLVGSLQRGTQRLTWLIDNLLESVRIEAGQLGIRRQDVVLEDVVVAARELIEPLIQ
                     QRGQRVVTEIGADVPVIRGDQQRLTQVVVNLLANANKFAPAESTIRIGARAAGSGLEF
                     WVEDEGAGPTDAEQSGLFERFRRSGGEHDPDESGLG"
BASE COUNT          242 a          583 c          555 g          252 t
ORIGIN      
        1 gccgaggccg ctctcgtcgg ggtcgtgctc gccgcccgag cgtcggaagc gctcgaacaa
       61 cccgctctgc tcagcatcgg tggggccggc gccctcatcc tcgacccaga actcgagccc
      121 ggaacccgcc gcgcgcgcgc cgattcggat cgtgctttcc gcgggcgcga atttgttcgc
      181 gttcgcgagc aggttcacga cgacttgcgt gaggcgttgc tgatcgccgc gaatcacggg
      241 aacgtcggcc ccgatctcgg tcacgacgcg ctggccgcgc tgctggatca gcggctcgat
      301 cagctcgcgt gcggcaacga cgacgtcctc gagcacgacg tcttggcggc gaatgccgag
      361 ctgaccggcc tcgatgcgaa cgctctcgag caaattgtcg atcagccacg tgaggcgctg
      421 cgtgccccgc tgcagcgagc cgacgagctg ccgctgcgcg tcgggctcga gcgtgccgat
      481 gccgtcgcgc agcagctcga tggaggcgag ctgtgccgcg agcggcgtgc ggaactcgtg
      541 cgagatgttc gcgagcatgc tgtcgcgcgt ccggcgcacg gcctcgagct ccgtctcgtc
      601 gcgcagcacc tgaacctgta gaccgtccgg atcggccggc gcggcgctcg agatcacgac
      661 gcgccgcacg tcgtcgtcga cgggcactac acgctcgacg gcgagccccg agcccgtgcg
      721 ccgcgcagcc aaaatcgggc acgaatgctc gcacggccgg cgcccttgcg cgtcacgctg
      781 cggcttcagc acgtcgccgc agaaggcgcc gagcgcttgc gcggatgcga ccttgagcag
      841 cctctcggcc tgcggattca ggaaacggat tcggcgatcg tggtcgacgg cgtacacgcc
      901 ttcgatgatg ccgccgagca cggcctgcgc ctcggcttcg cggcgccgca cctcgctcgt
      961 gagctcgatc aagttccggc gcatttgctc catcgtgctc ccgagcgtcg acagctcttt
     1021 ccctccgccg atcggaaacg acgcggccag gtcaccggtg cccatgcggt gcgcggcctc
     1081 ggtcaggcgc tcgacgacgc tgatccaata gcgacccacg agcacggcgc cgccggtcgc
     1141 cagcgcggcg atcaggacgg cgaccagcaa catcgtcgcg gcgatgccgg tgaccgggct
     1201 atcgacgtcc gcggccggga gcacggcttg aatcaacgcg accgtttcgg cggtcgaggc
     1261 cgcgaccggc aggctcgcga cgtacgcatc gagctcttcg acgtaggcgg cgacgggctc
     1321 gttctgagca agcgcgtccg tgtcgatgac ggccagcggg ccctcgccgg ggcgatacga
     1381 ctcgtaatcg aggatgccga tcgcaattcc gactcgctcg ctgagccgtt tcgcgaacgc
     1441 ttcgtccagg aagcgcagcg tcacgaccgt cacacccgga tgctcgagga ccgcggcgcg
     1501 tgccccggtg gcggccgtgg cctcggtcgc tccgcgcacg agaaacgtgt cgccctgctc
     1561 cgcggcagag tcgagcacgc gttgccaatc gacggccgtc gtcgtcgcga cgacgatctc
     1621 gttgccttgc ac
//
LOCUS       DATCUD010000107         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36665, whole genome shotgun sequence.
ACCESSION   DATCUD010000107 DATCUD010000000
VERSION     DATCUD010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36665"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            411..1052
                     /locus_tag="VIQ99_01560"
     CDS             411..1052
                     /locus_tag="VIQ99_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017450965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 family protein"
                     /protein_id="HEY9181853.1"
                     /translation="MNFISSLMPRQGRFFGLFDGHAKLIVDGAQALVDVLRRYEVDKD
                     RAAGIKIIEDVEHAADRITHETVQLLHTSFITPFDRDDIHRLISRMDDVLDLIQDAGE
                     SLLLYAIQRVTPEALQLAELLLRCAERVQSAVKLMATMAEGPEMLKICAEIDKLESEA
                     DKVMRSAISALFRDETDVRQLIKLKAVYESLESATDKCQDVANVIESVVLENG"
     gene            1074..>1544
                     /locus_tag="VIQ99_01565"
     CDS             1074..>1544
                     /locus_tag="VIQ99_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011903243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY9181854.1"
                     /translation="MGLAEVSTTLLLLVLLALAFDFMNGFHDAANSIATVVSTNVLKP
                     WQAVLWAALFNVLAFWVFHLSVAATVGKGIIDPEFVDSQVIFGALIGAISWNLITWYY
                     GIPSSSSHALIGGMIGAAVAKASGAPLLWPGILKTTAFIFVSPMLGLTLGALIMV"
BASE COUNT          318 a          456 c          479 g          291 t
ORIGIN      
        1 acacagcgtc gaacgcgatg ccgagcaacc gaaacggcag cgagatcagc catacgatcg
       61 gccacagcag cagcgccagc agtgcgagcg gccaacatag cacgagcaac aataaccagc
      121 cgatgaaggt caagaaactc atggtcggat tgacactgtt ttgaaacctt gacaactctg
      181 gcctcaagtt tgcagcactg ggcggcgtcg ttctactggc aggcggcgcg ctgctcgcag
      241 tgctgacggc cgagaacgcg ccggcgccga catgaacctg aaatcgatct ggacgatcgc
      301 atgggcgcgc gaccactaca attatccggg tgattgtttc gaatctgtga cgagcgtgta
      361 ccggacccag taaactccgc acgcgaagcg gaaaggggcc agtaagaaga atgaatttta
      421 tctccagtct gatgccgcgc cagggccgat tcttcggtct gttcgatggc cacgcgaagc
      481 tgatcgtgga cggcgcacag gcgctcgtgg atgttttgcg ccgctacgaa gtcgataagg
      541 atcgcgccgc cggcatcaag atcatcgaag acgtcgagca cgcggccgat cgcatcacgc
      601 acgaaacagt gcagctgttg catacgagtt tcatcacgcc gttcgatcgc gacgatattc
      661 accggttgat ctcgcgcatg gacgacgtac tggatctgat ccaggacgcg ggcgagtcgc
      721 tgcttctcta tgccatccag agggtgactc ccgaggcact tcagctcgcc gagctgctcc
      781 tgcggtgcgc cgagcgtgtg cagtctgccg taaagctgat ggcgacaatg gccgagggtc
      841 ccgagatgct gaagatctgc gcggagatcg acaagctcga atccgaggcc gacaaggtca
      901 tgcgcagcgc gatctcggcg ctgttccgcg acgagacgga cgtgcgtcag ctgatcaagc
      961 tgaaagccgt gtacgagtcg ctcgagtccg cgacggacaa gtgccaggat gtggccaacg
     1021 tgatcgaaag cgtcgtgctc gagaacggct aacgaaagcc gagtccgcga cgcatgggtc
     1081 tcgccgaagt ctcgacaacg ctgctgctgc tcgtgctgct ggcgctcgcg ttcgacttca
     1141 tgaacgggtt ccacgacgcg gcgaactcga tcgcgaccgt cgtatcgacg aacgtgctga
     1201 agccgtggca ggccgtgctc tgggccgcgt tgttcaacgt tctggcattt tgggtctttc
     1261 acttgtccgt tgccgcgacc gtcggcaaag gcatcatcga tcccgagttc gtggacagcc
     1321 aagtgatctt cggcgcattg atcggcgcga tcagctggaa cctgatcacg tggtactacg
     1381 gcatcccgtc gagctcgtcg cacgcgctga tcggcggcat gatcggtgcg gccgtcgcga
     1441 aggccagcgg ggcgccactg ctttggccgg gaatcctgaa gacaaccgct ttcatcttcg
     1501 tctcgccgat gctcggcctg acgctcggag ccctgatcat ggtc
//
LOCUS       DATCUD010000108         2958 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_29548, whole genome shotgun sequence.
ACCESSION   DATCUD010000108 DATCUD010000000
VERSION     DATCUD010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2958
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29548"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..1974
                     /gene="rpoD"
                     /locus_tag="VIQ99_01570"
     CDS             112..1974
                     /gene="rpoD"
                     /locus_tag="VIQ99_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEY9181855.1"
                     /translation="MPTETPQAQLQEDERQSQLKLLIAKGKEQGYLTYSEVNDHLPSE
                     IVDPEQIEDIVNMINDMGITVYEKAPDAESLILSDSAVSNDEDAAEEAAAALATVDAE
                     FGRTTDPVRMYMREMGTVELLTREGEIRIAKRIEEGLDQVRAALAQFPLTGTLIFDTY
                     DSILRGETRLQDLITGFIDPNEQIADPNARAAAAAAEPPRDEESDDPDAEEETPDTGP
                     DPEEVAARLKKVKRLHKKYVETLGAKGVKDAATKKALKSLTNEFMELKLAPKVFDALV
                     GQLRETINQIRSQERAVMALCVRDAGMPRKDFIASFPKNETNLHWVDKHIRQKRKYSS
                     ALNKAKEDIQKAQKRLQKIEEATVLSIGDLKEINREISLGEAQARRAKKEMVEANLRL
                     VISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIA
                     DQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPDELAQRMEMPEDKVRKVLKIAK
                     EPISMETPIGDDEDSHLGDFIEDTAVSSPIDSATDEGLKETTHAVLAGLTPREAKVLR
                     MRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSDQLRSFLIED"
     gene            2060..>2958
                     /locus_tag="VIQ99_01575"
     CDS             2060..>2958
                     /locus_tag="VIQ99_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181856.1"
                     /translation="MQATRCVLFLAGLIASAAAQHAGAEVAMLRTVAALDEPRGYCLD
                     ISGAGPTIDLDAPLQAHTCKGQGTIDDELFEANAEQIRASEHDRCLAAEALEPGKPLL
                     LRACSSSRVMRWRFADGRLSPASRPELCVTLGSAASEPWGTPRLVSPAYRRQTLALAA
                     CEEAAAARQTFRWIRPAEVAPSRADDERAGMPADVAIALAAFGREFDGAIAQQTAALY
                     APQPRVYEQAEIAVTKDLAYGSHERQRLDIYTRVRRPAEPVPAIVVFHGGGLIGGSRA
                     ATVNVAEYFASLGYVGVNGGYRLG"
BASE COUNT          599 a          970 c          963 g          426 t
ORIGIN      
        1 gaatttcgcc tcgaatgtga ggtatttcac ggaaccagtg cctagcacaa aaagtcctag
       61 ccgagtatat tgccccgttc gatttcgccc ctcccccgcc agaggaaatt catgcccacg
      121 gaaactcccc aggcacagct ccaggaagac gaacgtcaat cgcagctgaa gctgctcatt
      181 gcgaaaggca aggagcaggg ttacctcacg tacagcgaag tcaacgacca cctgccgagc
      241 gagatcgtcg acccggagca gatcgaagac atcgtcaaca tgatcaacga tatgggcatc
      301 acggtgtacg agaaggcacc ggacgccgaa tcgctgatcc tttccgactc tgccgtctcg
      361 aacgatgaag atgccgccga agaggccgcg gccgcgctgg cgaccgtgga cgccgagttc
      421 ggccgcacga cagatcccgt gcgcatgtac atgcgcgaga tgggcaccgt cgagctgctg
      481 acgcgtgaag gcgagattcg catcgcgaag cgcatcgaag aagggctcga tcaagtccgc
      541 gcggcgctcg cgcagtttcc gttgaccggc actctgattt tcgacacgta cgattcgatt
      601 ctgcgcggcg agacgcgtct gcaggatctg atcacgggct tcatcgatcc gaacgagcag
      661 atcgccgacc cgaacgcgcg cgcggccgct gcagccgcgg agccgccgcg cgacgaagag
      721 agcgacgatc ccgacgccga ggaagagacg ccggacacgg gccccgatcc cgaggaagtc
      781 gcggcgcgct tgaagaaggt gaagcggctg cacaagaagt acgtcgagac gctcggcgcg
      841 aaaggcgtga aagacgcggc caccaagaaa gccctgaagt cgctcacgaa cgaattcatg
      901 gagctgaagc tcgcgccgaa ggtgttcgac gcgctcgtcg gccaactccg cgagacgatc
      961 aatcagatcc gcagccagga acgcgcggtc atggcgctgt gcgtccgcga tgcgggtatg
     1021 ccgcgcaagg atttcatcgc gagcttcccg aagaacgaga cgaacctgca ctgggtcgac
     1081 aagcacattc gccagaaacg caagtactcg tccgccctga acaaggccaa ggaagacatc
     1141 cagaaggcgc agaaacgcct gcagaagatc gaggaagcaa cggtgctctc gatcggcgac
     1201 ctgaaggaga tcaaccgcga gatctcgctc ggcgaagctc aggcgcgccg tgcgaagaag
     1261 gagatggtcg aggcgaacct gcgcctggtg atctcgatcg cgaagaagta cacgaaccgc
     1321 ggcctgcagt tcttggacct gatccaggaa ggcaacatcg gcctgatgaa ggccgtcgac
     1381 aagttcgagt accgtcgcgg ctacaaattc tcgacgtacg cgacgtggtg gatccgccag
     1441 gccatcacgc gctcgatcgc ggaccaggcg cgcacgatcc gcatccccgt gcacatgatc
     1501 gagaccatca acaagctgaa ccgcatctcg cggcagatgc tgcaagagat gggccgcgag
     1561 ccgactccgg acgagctcgc acagcgcatg gaaatgcccg aggacaaggt ccgcaaggtg
     1621 ctgaagatcg cgaaagagcc gatctcgatg gaaacgccga tcggcgacga cgaggactcg
     1681 cacctgggcg acttcatcga ggacacggcc gtgtcttcgc cgatcgactc cgcgaccgac
     1741 gaaggcttga aggaaacgac gcacgccgtg ctcgcgggct tgacgccgcg tgaggccaag
     1801 gtgctgcgaa tgcgcttcgg catcgacatg aacaccgacc acacgctcga agaggtcggc
     1861 aagcagttcg acgtcacgcg cgagcgcatt cggcagatcg aggcaaaggc gctgcgcaag
     1921 ctgcgccatc cgtcgcgctc ggatcagctg cgcagcttcc tgatcgagga ctagcctgag
     1981 cggcgccggg ggcctgcccc tggcgccttc tctcacctcg cacgcatact ggctcgccgt
     2041 tcatcggcgg gagttgcgta tgcaagccac caggtgtgtg ctctttttgg cgggactcat
     2101 cgcctcggcg gcggcacagc atgccggcgc cgaagtcgcg atgttgcgca cggtcgcggc
     2161 actcgacgag ccgcgcggct actgcctcga tatttccggc gccggcccga ccatcgatct
     2221 cgacgcgccg ctccaggcgc acacctgcaa agggcaggga acgatcgacg acgagctgtt
     2281 cgaggcgaac gctgagcaga tccgtgccag cgagcacgac cgctgcctcg cggcggaggc
     2341 gctcgagccc ggcaaaccgc tgctactgcg tgcttgctcg agctcgcgcg tcatgcgctg
     2401 gcgcttcgcc gacggccggt tgagcccggc gtcccggccc gagctctgcg tcacgctcgg
     2461 cagcgcggcc agcgagccgt ggggcacgcc gcggctcgtc tcaccggcgt accgccggca
     2521 gacgctcgcg ctggctgcct gcgaagaagc ggccgcggcg cgccagacgt tccgctggat
     2581 ccgccccgcc gaggtcgcgc cgagccgcgc cgacgacgaa cgcgccggca tgccggccga
     2641 cgtcgcgatc gcgctcgctg cgttcggccg cgagttcgac ggcgcgatcg cgcaacagac
     2701 ggcggccctg tatgcgccgc agccgcgcgt ctacgagcag gccgagatcg cggtcacgaa
     2761 ggacttggcg tacggatcgc acgagcgcca gcgcctcgac atctatacgc gcgtgcgccg
     2821 cccggccgag cccgtgcccg cgatcgtcgt gttccacggc ggcggtctca tcggcggcag
     2881 ccgcgccgcg acggtgaacg tggccgagta cttcgcgagc ttgggctacg tcggcgtcaa
     2941 cggcggctat cggctggg
//
LOCUS       DATCUD010000109         3253 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_57898, whole genome shotgun sequence.
ACCESSION   DATCUD010000109 DATCUD010000000
VERSION     DATCUD010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3253
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57898"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="VIQ99_01580"
     CDS             complement(<1..428)
                     /locus_tag="VIQ99_01580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181857.1"
                     /translation="MNRLLVWCGVAAMALAPMTAAGQAITRFARFTGNLNFVATGGSL
                     RTSTSDACAVGASSTQALTGIPAGASIVAAYLYWGGSGSTADTNVTLNGVGVAAQRTF
                     STTFVNGGTSFPYFGGFADITTRITGNGSLTFSGLTVATGA"
     gene            599..1633
                     /locus_tag="VIQ99_01585"
     CDS             599..1633
                     /locus_tag="VIQ99_01585"
                     /inference="COORDINATES: protein motif:HMM:TIGR01451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181858.1"
                     /translation="MEVSDAFSRIRVVLHDARRFAVSAALPVLAVFALLPTAAHAVGT
                     PAGTNIQNTATVDYSVGGTPLSMTSNTTSLLVAETVNVAVALQSSTVAVTAGAANEAL
                     VFLVTNSGNGPETFALTGDSALIGDDFDPMPATPFIYFDSDASGDLSPADVPYVAGGN
                     DPLLAADASVTVILVNDIPAATPDGDLGRSELRATSTTGSGAPGTAFPGQGFGGVDAV
                     IGTSGGEAAVFGEYLVGNIQISAVKSQTVSDPFGGTRPIPGATITYQIVVTATGAGAA
                     IGTAFNDAIPADTTYVTGSATLNGAGLTDSADADAGTFVTTPPAVTVALGDLTAASGP
                     QTIVFRVTID"
     gene            1662..2165
                     /locus_tag="VIQ99_01590"
     CDS             1662..2165
                     /locus_tag="VIQ99_01590"
                     /inference="COORDINATES: protein motif:HMM:TIGR01451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181859.1"
                     /translation="MFDRITVVRTALLALSLGTGATALAQTADRGCIELKTVAEVEET
                     YVDANGNTATRLTPAAKVVPGDEVVWTIVANNVCTSPAGDVAITNPVPDHMRYVGNSA
                     FGPGANIEFSLDGTAFAAAEALTVAEADGSRRAARADEYSAIRWALPRPMGPSESLVV
                     RYRAVVL"
     gene            2217..>3253
                     /locus_tag="VIQ99_01595"
     CDS             2217..>3253
                     /locus_tag="VIQ99_01595"
                     /inference="COORDINATES: protein motif:HMM:TIGR01451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181860.1"
                     /translation="MTILTRTSLRAALVVLAAVGGWWSTANAQSTLTPAGTFINNRAT
                     VNYTVGGAPQTPIESSPTGNTTPGVTAGADTTFVVDNRVDLTVAESSGNATITAPGAT
                     TPWLAFTVTNTGNATQGYQLSFTEEAGTLLFGNTDNDDFGVGNLLLLVDEDPSLGQGT
                     GNDLFDGTETATAIDSLAPGYSVTVFVVSPNVPLTLTNGDFANVRLQAQTAVAGTNGA
                     TLVVASTVANDPTTVEILFADAGNDATQSAADQFAVQSAALTVTKTQTVIDDGFGSAS
                     PRAIPNAVVEYTITVANGSTTTAATGVAISDPIPAATTFQTGLYPGPSDVAITGGAAA
                     SCVAETPADTNG"
BASE COUNT          576 a         1147 c         1070 g          460 t
ORIGIN      
        1 gcgccggtcg cgaccgtgag acccgagaac gtcagcgagc cgttgccggt gatccgcgtc
       61 gtgatgtccg cgaaaccgcc gaagtacggg aagctcgtgc cgccgttcac gaacgtcgtc
      121 gagaacgtgc gctgcgccgc gacgccgacg ccgttcaacg tgacgttcgt atccgcggtc
      181 gagcccgacc cgccccagta caaatatgcg gccacgatcg acgcgccggc cggaatgccc
      241 gtcagcgctt gcgtgctcga cgcgccgacc gcgcacgcgt cgctggtgct cgtgcgcagc
      301 gagccgcccg tcgcgacaaa attcaaattg ccggtgaagc gcgcgaaacg cgtgatggcc
      361 tggcccgccg cggtcatggg cgcgagcgcc atcgccgcca ctccgcacca aacgaggagc
      421 cggttcatgt cgaggcgttt attaatgtgc gcaaccgaat cgagacacag cgcatatttc
      481 ggtaagcgga cataacaatc cgcgacgccc tcgacagttt cgccgcggac tttaggttac
      541 ggtgcgcaaa ccttgaacgg attcacaggg caacccgcgc attgaggcgc ggcgctgcat
      601 ggaagtgagc gacgcattct ccagaatacg agtcgtgctg catgacgcac ggcgcttcgc
      661 cgtgagcgcg gcgttgcccg tgcttgcggt attcgcgctt ttgccgaccg cagcacacgc
      721 ggtcggcaca ccggccggca cgaacattca aaacaccgcg accgtcgact actcggtcgg
      781 cggcacgccg ttgtcgatga cgtcgaacac gacgtcactg ctcgtggccg agaccgtcaa
      841 cgtcgcggtc gcactgcaga gctcgaccgt tgccgtcacg gccggagccg cgaacgaagc
      901 gttggtgttc ctcgtcacga acagcggcaa cggccccgag acgttcgcgt tgaccggcga
      961 cagcgcgctg atcggtgacg acttcgatcc gatgcccgct acgccgttca tctatttcga
     1021 cagcgatgcc agcggcgacc tgtcgccggc cgacgtgccg tacgtggccg gcggcaacga
     1081 tccgctgctc gcggctgacg cgagcgttac ggtgatcctc gtgaacgaca ttccggccgc
     1141 aacgcccgac ggcgatctcg gccgcagcga gctgcgcgcg acgtcgacga ccggcagcgg
     1201 agcgcccggc accgcgttcc cgggccaagg cttcggcggc gtcgacgccg tgatcggcac
     1261 gagcggcggt gaagccgccg tgttcggcga gtacctggtc ggcaacatcc agatctccgc
     1321 ggtgaagtcg caaaccgtca gcgatccgtt cggcggcaca cggccgatcc cgggcgccac
     1381 gatcacgtat cagatcgtcg tgacggcgac cggcgcgggc gccgcgatcg gcaccgcatt
     1441 caacgacgcg attccggccg acacgaccta tgtgaccggc agcgcgacgc tgaacggcgc
     1501 gggactgacc gactcggccg acgccgatgc cggcacgttc gtgaccacgc cgccggcggt
     1561 cacggtcgcg ctcggcgatc tcacggccgc atccgggccg cagaccatcg tttttcgcgt
     1621 gacgatcgat tgacgatcgg cacctagagg aggaagcacg catgttcgac cgaatcaccg
     1681 ttgtgagaac cgccctgctc gcgctgagcc tcggtaccgg cgccacggcg ctcgcgcaga
     1741 ccgccgaccg cggctgcatc gagctcaaga ccgtcgccga ggtcgaggag acgtacgtcg
     1801 acgcgaacgg caacaccgcg acgcgcttga cgccggccgc gaaggtcgtg cccggcgacg
     1861 aggtcgtgtg gacgatcgtc gcgaacaacg tctgcacgtc gccggccggc gacgtcgcga
     1921 tcacgaaccc cgtgcccgac cacatgcgct acgtcggcaa ttcggcgttc ggccccggcg
     1981 ccaacatcga gttctcgctc gacggcaccg cgttcgcggc ggccgaagcg ctgaccgtcg
     2041 ccgaagccga cggctcgcgc cgcgcggccc gagccgacga gtactcggcg atccgctggg
     2101 cgctgccgcg cccgatgggg ccgagcgagt cgttggtcgt gcgctatcgc gcagtcgtcc
     2161 tctaattttc ggccccgacg gaccggggct gtcagcaagt agcaaggagc agcgaaatga
     2221 cgatcctcac ccgaacgagc ttgcgtgccg cgctcgtcgt cctggccgcg gtcggtggtt
     2281 ggtggagtac cgccaacgcg cagtcgacct tgacgccggc cggcacgttc atcaacaacc
     2341 gcgccacggt gaactacacc gtcggcggcg cgccgcagac cccgatcgag agctcgccga
     2401 cgggcaacac gacacccggc gtcaccgcag gcgccgacac gacgttcgtc gtcgacaatc
     2461 gcgtcgacct gaccgtcgcc gagtcgtccg gcaacgcgac gatcacggca ccgggagcca
     2521 cgacgccttg gctcgcgttc acggtgacga acaccggcaa cgcgacgcag ggctatcagc
     2581 tctcgttcac cgaggaagcc ggcacgctgc tgttcggcaa caccgacaac gacgacttcg
     2641 gcgtcgggaa cctgctgctg ctcgtggacg aggacccgag cttaggacaa ggcacgggta
     2701 acgacctgtt cgacggcacg gaaacggcga cggcgatcga ctcgctggcc cccggttact
     2761 ccgtgacggt gttcgtcgtc tcaccgaacg tgccgctcac gctcacgaac ggcgacttcg
     2821 cgaacgtgcg cctccaggca cagaccgccg tggcaggcac gaacggcgcg acgctcgtgg
     2881 tcgcgtcgac cgtggcgaac gacccgacca cggtcgagat cctgttcgcg gacgccggca
     2941 acgacgccac gcagagcgcg gccgaccagt tcgcggtgca atccgcggct ctgaccgtga
     3001 cgaagacgca gaccgtcatc gacgacggct tcggcagcgc gagcccgcgt gcgattccga
     3061 acgcggtcgt cgagtacacg atcacggtcg cgaacggcag cacgacgacg gccgcgacgg
     3121 gtgtcgcgat cagcgatccg atacccgcgg ccacgacgtt ccagaccggg ctctaccccg
     3181 gccccagcga cgtcgcgatc acgggcggcg cggccgcaag ctgcgtcgcg gagacgccgg
     3241 ccgacacgaa cgg
//
LOCUS       DATCUD010000110         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50921, whole genome shotgun sequence.
ACCESSION   DATCUD010000110 DATCUD010000000
VERSION     DATCUD010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50921"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1515
                     /locus_tag="VIQ99_01600"
     CDS             <1..>1515
                     /locus_tag="VIQ99_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3604 domain-containing protein"
                     /protein_id="HEY9181861.1"
                     /translation="RPLHFLVVADHSDGMGFFPQLMSGDPGLLATPQGRKWYDQIKSG
                     EGAAAAIDIITSFGRGQMPEGYPTPGTSAYRNAWQQTIAAAEDYNEPGRFTAFIGYEW
                     TSNAAGNNLHRNVIFRGNGAQASLVEPFTTLAPLGSTNPVDLWKWMAAAEEKTGTEVL
                     AIAHNGNLSNGLMFPLVEQFGKRVDREYVETRARWEPLYEMTQTKGTGEAHPFLSPND
                     EFANFELWDKGNLDATVAKADEMLEREYARSALKLGLRLEEQLGTNPYKFGMVGSSDA
                     HTGLAAMEEDNFFGKTAPQEPSAERMTNTFVANANTGITIMDWEVGASGYAAVWATEN
                     TREAIFDAMKRREAYATTGSRMAVRFFGGWDFVAADANNRMPAAIGYTKGVPMGGDLT
                     NAPQGKSPTFLVAALKDSIGANLDRIQIVKGWLDSDGRTQHERVYDVAVSGGRTIDAN
                     GRAMTPVGNTVDVANATWTNTIGAPELIAVWTDPAFDPSLRAFYYARVLEIPTPR"
BASE COUNT          290 a          489 c          510 g          226 t
ORIGIN      
        1 gcggccgctc cacttcctcg tcgtggccga tcactcggat ggaatgggct ttttcccgca
       61 gctcatgagc ggcgacccgg ggttgctggc gacgccgcag gggcgcaagt ggtatgacca
      121 gatcaagagc ggcgaaggtg ccgcggcggc catcgacatc attaccagct tcggcagggg
      181 ccagatgccg gagggctatc cgaccccggg cacttcggcc tatcgcaatg cctggcaaca
      241 gaccatcgcg gccgccgagg attacaacga gccggggcgc ttcacggcgt tcatcggcta
      301 cgagtggacc tcgaatgcgg ccggcaacaa cttgcaccgc aacgtgatct tccgtggtaa
      361 cggcgcgcag gcgagcttgg tcgagccctt taccacgctg gcgccgctcg gcagcacgaa
      421 ccccgtggat ctctggaagt ggatggcggc cgccgaggag aagacgggca ccgaagtgct
      481 cgcgatcgcc cacaacggca acttgagcaa cggcctcatg ttcccgctcg tcgagcagtt
      541 cggcaagagg gtcgaccggg agtatgtcga gacgcgggcg cgatgggagc cgctctacga
      601 gatgacccag acgaagggca ccggtgaggc gcatccgttc ctgtcgccga acgacgagtt
      661 cgcgaacttc gagctctggg acaagggcaa tctcgacgcg accgtggcga aggccgacga
      721 gatgctcgag cgcgagtacg cgcgttcggc gctgaagctc gggctcaggc tcgaagagca
      781 gctcggcacg aatccttaca agttcggcat ggtgggcagc agcgacgcgc ataccgggct
      841 cgccgcgatg gaggaggaca acttcttcgg caagaccgct ccgcaggagc cgagcgccga
      901 gcggatgacg aatacgttcg tcgccaacgc caatacaggc atcacgatca tggattggga
      961 agtcggtgcc tcgggatacg ccgccgtgtg ggcgacggag aacacacgcg aagcgatctt
     1021 cgacgcgatg aagcgccggg aggcgtacgc caccacgggc tcgcgcatgg ccgtgcgctt
     1081 cttcggcggt tgggacttcg tcgccgccga cgccaacaac cgcatgcctg ccgccatcgg
     1141 gtacacgaaa ggcgtgccga tgggcggcga cctgaccaac gcgccgcagg gcaaatcgcc
     1201 gacattcctc gtggccgcgc tgaaggattc catcggcgcc aacctcgacc gcatccagat
     1261 cgtcaagggc tggctcgaca gcgacggtag gacgcagcac gagcgcgttt acgacgtggc
     1321 cgtttcgggt gggcgcacga tcgacgccaa cggtcgcgcg atgaccccgg tcggcaacac
     1381 cgtggacgtc gcgaacgcca cgtggacgaa cacgatcggc gcgccggagc tcattgcagt
     1441 ctggaccgac cctgcgttcg atccgagcct gcgcgccttc tactacgccc gcgtgctcga
     1501 gattcccacg ccgcg
//
LOCUS       DATCUD010000111         3862 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50937, whole genome shotgun sequence.
ACCESSION   DATCUD010000111 DATCUD010000000
VERSION     DATCUD010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3862
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50937"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1648
                     /locus_tag="VIQ99_01605"
     CDS             <1..1648
                     /locus_tag="VIQ99_01605"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HEY9181862.1"
                     /translation="MFGANVGKTEQLEVTLDGQRVLLQDLGEYQVETGAAIRMAVTAG
                     PHTLGAAFIKKNHAPVEDVLQPFEFSLFEPAVDGDPTWTLVPHLASIAVTGPFAISGV
                     SDTPTRRKIFVCRPERPSEEEACARRIVETLATRAFRQPIGREQLSTLMEFYAVGRAQ
                     GGFEAGIEMALRRILAAPEFVFRFERAPDVAPGEIYRISDVELASRLSFFLWSSIPDD
                     ELLELAIDDRLHEPGTLRKQVRRMLDDPRSDALIENFAGQWLYLRNLKTKGGAVEHFP
                     DFDDNLRLAFRTETEMLFASIVREDRNLLDLLTADYTFVNDRLARHYGMPGIYGSEFR
                     RVPVALDARRGLLGHGSILLVTSYPERTSPVQRGVWVLENIIGAPIPTPPPNVPALEE
                     QAGTKNDPRTLREQMELHTTRPFCAGCHKIMDPIGFAMENFDAIGRWRTEEHGEPIDA
                     RARMVDGTELDGAVDLRNALLKYGDRFVQTTTEKLMTYALGRGLEYYDMPTVRAIARS
                     AAENNYRFSTIILGLVESDAFQWKAAEDLPAETEIVAGAR"
     gene            1673..2992
                     /locus_tag="VIQ99_01610"
     CDS             1673..2992
                     /locus_tag="VIQ99_01610"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9181863.1"
                     /translation="MFITKRHLPRRTFLRGMGAGIALPLLDAMVPALAATPAAPSRYS
                     FLHVPHGASPGYWRPTGTGKNWELSRILAPIAPFKDRITVISGTDHRMATSLSPEESA
                     GDHSRTAAVYLSAAHPKRTEGQDIYAGITIDQVLANKIGRESPLPSLELCIEDVGSLG
                     VCGVGYSCAYTNTISWSSPTSPLPMERNPQVVFDRLFGDGGTPEERAARKREDRSILD
                     SVLADTNRLKRGLGPSDLARFDDYLEDIREIERRIALAEHTAAIEADRPDTAELPFDE
                     HVKLMFDLQVLAFRADITRVATMMFARDLSAKVYTESGVPDAYHALSHHQSDPVRMER
                     YAKLNAYHVSLVGYFLDKLRNTQDGGSNLLDDSLVMFGSPMGDSNLHDHNDLPVLIAG
                     TAAGRYETNRHIANPKGTPLANFFLTLAEKEGIHLDSFGDSTAQMAI"
     gene            3089..>3862
                     /locus_tag="VIQ99_01615"
     CDS             3089..>3862
                     /locus_tag="VIQ99_01615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181864.1"
                     /translation="MRRNAWTLLVVALAVASPDDATAQAVTTHFESSGTEQKPRSNAG
                     VSIQRDRLRMRADVALRGAATPSDAANPRPSGKTEVVPNLRSAFTLAKNLDLETRVSF
                     AEWNAGTDATVDTRLRYRKSLDSFFDELDGSVRRSPDGLTTQTLRLGFHEILGDAGAT
                     APLTIAGEATFEAARDAVSSLAASSRDRRRVGVETRIAGLMSSFVTTDHTLTFRLERT
                     AGARPERARMLAYDQLWAPTSLTRVGFNMWLQRRSGVGAD"
BASE COUNT          693 a         1289 c         1288 g          592 t
ORIGIN      
        1 catgttcggc gccaacgtgg gcaagaccga gcaactcgag gtcacgctcg acggccagcg
       61 cgtgttgctg caagacctcg gtgagtatca agtcgagacc ggcgctgcga tccgaatggc
      121 ggtgacggcc ggtccgcaca cgctcggcgc ggcgttcatc aagaagaacc acgcgccggt
      181 cgaggacgtg ctccagccgt tcgagttcag cttgttcgag cccgccgtgg acggcgaccc
      241 gacgtggacc ctcgtgccgc atctcgcgag catcgccgtg accgggccgt tcgcaatctc
      301 cggcgtcagc gatacgccga cgcggcggaa gatcttcgtg tgccggccgg agcgccccag
      361 cgaagaggaa gcgtgcgcga ggcggatcgt cgagacgctc gcgacgcgag cgttccgcca
      421 accgatcggc cgcgagcagc tctcgacact gatggagttc tacgccgtcg gccgcgcgca
      481 aggcggcttc gaagccggga tcgagatggc gctgcggcgg atcttggcgg cacccgagtt
      541 cgtgttccgg ttcgagcgcg cgcccgacgt cgcgccgggc gagatctacc gcatcagcga
      601 cgtcgagctc gcgtcgcggt tgtcgttctt cctgtggagc agcatcccag acgacgagct
      661 gctcgagctc gcgatcgacg atcgcctgca cgagcccggg acactacgca agcaggtgcg
      721 gcgaatgctc gacgacccgc gctcggacgc attgatcgag aatttcgcgg ggcagtggct
      781 gtatctgcgc aacctgaaaa ccaagggcgg cgccgtcgag catttccccg acttcgacga
      841 caatctgcgt ctggccttcc gcaccgaaac cgaaatgctg ttcgcgagca tcgtgcgcga
      901 ggatcgcaat ctgctggatc tcctgacggc cgattacacg ttcgtgaacg atcggctcgc
      961 acgccactac ggtatgcccg gtatctacgg cagcgagttc cgccgcgtgc ccgtcgcgct
     1021 cgacgcgcgg cgcgggctgc tcggccacgg cagcattctg ctcgtgacgt cgtatccgga
     1081 gcggacttca cccgtgcagc gcggggtctg ggtcctcgag aacatcatcg gtgcaccgat
     1141 cccgacgccg ccgccaaacg tgcccgcgct cgaagagcag gcggggacca agaacgaccc
     1201 gcgcacgctg cgcgagcaga tggagctgca cacgacccgg ccgttctgcg cagggtgcca
     1261 caagatcatg gacccgatcg gcttcgcgat ggagaacttc gacgcgatcg gccgctggcg
     1321 caccgaggag cacggcgagc cgatcgacgc gcgggcgcgc atggtcgatg ggacggagct
     1381 cgacggcgcc gtcgacctcc gcaacgcact gctgaagtac ggcgaccgat tcgtgcagac
     1441 cacgaccgag aaactgatga cctacgcgct cggccgcggc ctcgagtact acgacatgcc
     1501 gacggtgcgc gcgattgcgc gcagcgcggc cgagaacaac tatcgcttct ccacgatcat
     1561 tttggggtta gtggaaagcg acgcgtttca gtggaaggcc gccgaggacc ttccggcgga
     1621 gaccgagatc gtggcaggcg cccgctgatc gaagctcaag gagacgaccg cgatgttcat
     1681 caccaaacga catcttcccc gccgaacgtt cctgcgcggc atgggcgcgg gcatcgcctt
     1741 gcccctgctc gacgcgatgg tgccggcgct ggccgcgacg ccggcggcgc cgagccgtta
     1801 cagctttctg cacgtcccgc acggagcgtc gccgggctac tggcggccca cgggcacggg
     1861 caagaattgg gagctatcga ggattctggc gccgatcgcg ccattcaagg atcggattac
     1921 cgtgatcagc ggcaccgacc accgcatggc tacgtctctg tcgcccgaag agagcgccgg
     1981 cgaccattcg cggaccgcag ccgtgtacct gagcgctgcg catccgaaac gcacggaagg
     2041 tcaagacatc tacgcgggca ttacgatcga tcaggtgctc gcgaacaaga tcggacgcga
     2101 gagccccctg ccctcgctgg agctttgcat cgaggacgtg ggctctctcg gtgtgtgcgg
     2161 cgtcggctac agttgcgcat acacgaatac gatctcgtgg tcgtcgccga cgtctccgct
     2221 gccgatggag cgcaacccgc aggtcgtgtt cgaccggctg ttcggcgacg gcggcacacc
     2281 cgaggagcgt gccgcgcgca agcgcgagga ccgcagcatc ttggattccg tgctcgccga
     2341 cacgaatcgg ctgaagcgcg gcttgggccc gagcgacctc gcgcgcttcg acgactatct
     2401 ggaagacatc cgcgagatcg agcgccggat cgcgctcgcg gagcacactg ccgcgatcga
     2461 ggccgaccgg cccgacaccg ccgagctgcc gttcgacgag cacgtcaagc tgatgttcga
     2521 cctgcaggtg ttggcgttca gggccgatat cacgcgcgtc gcgacgatga tgttcgcgcg
     2581 cgacctcagc gcgaaggtgt acacggagag tggcgtgccg gacgcctacc atgcgctttc
     2641 acaccaccag agcgacccgg tgcgcatgga gcgttacgcg aaactgaacg cctatcatgt
     2701 gagcctggtc ggttacttcc tcgacaagct ccgcaacacg caagacgggg gctcgaatct
     2761 actcgacgac tcgctcgtga tgttcggcag cccgatggga gactcgaacc tgcacgatca
     2821 caacgacctg ccggtcctga tcgcgggcac ggccgcgggg cgttacgaga cgaatcggca
     2881 catcgcgaac ccgaagggca cgcctctcgc gaacttcttc ctcacgctcg cggagaagga
     2941 aggcatccac ctcgacagct tcggcgacag cacggcgcag atggcgatct agcagcgcgc
     3001 gtcccgaaaa ggtgaccggc gtcgcgtcga gcggcggccg cattcgctag agtccgatcg
     3061 catagggact cggagcgaga tcggggacgt gcgacggaac gcttggacac tgctcgtagt
     3121 ggcgctggcc gtcgcgtcgc ccgacgacgc gaccgcccag gccgtgacga cgcatttcga
     3181 gtcctcgggc accgagcaga aaccgcgcag caacgccggg gtgtcgattc agcgagacag
     3241 gctccgtatg cgcgcggatg tcgcgctgcg aggggccgcg actcctagcg acgccgcaaa
     3301 cccgcgaccg agcggcaaga ccgaggtcgt tccgaacctg cgctcggcgt tcacgctcgc
     3361 gaagaacctc gacctcgaga cgcgcgtgag cttcgcggag tggaacgccg gcaccgacgc
     3421 caccgtcgac acgcggctgc gttaccggaa gtcgctggac tccttcttcg acgagctcga
     3481 cggcagcgtg cggcgatcac ccgacggcct gacgacgcag accttgcggc tcggcttcca
     3541 cgagatcttg ggtgacgccg gtgcgacggc gccgctgacg atcgccggtg aagcgacctt
     3601 cgaggcggct cgagatgccg tgtcgtcgct ggcggcatcg tcgcgcgata ggcgcagagt
     3661 cggcgtcgag acgcgcatcg ccggcctcat gtcgtcgttc gtgacgacag accacacgct
     3721 gaccttcagg ctcgagagaa cggccggagc ccgccccgaa cgcgcgagaa tgctcgctta
     3781 cgaccaactg tgggcgccga cctcgctgac acgcgtcggc ttcaatatgt ggctccagcg
     3841 gcggtccggc gtcggggccg ac
//
LOCUS       DATCUD010000112         4546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1287, whole genome shotgun sequence.
ACCESSION   DATCUD010000112 DATCUD010000000
VERSION     DATCUD010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1287"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VIQ99_01620"
     CDS             <1..392
                     /locus_tag="VIQ99_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181865.1"
                     /translation="EARTFPPGDWDPQNVAACGTFFELTLPAESLDVSTRFWQRLGFA
                     PLTAGDEPHRWQRLRGFGVDIGLHETHCAPGLSFRCPDIAARSEYLRAKGVKLRAGTP
                     LADSAQPSATLTAPEGTVLYLFESGAQ"
     gene            complement(399..974)
                     /locus_tag="VIQ99_01625"
     CDS             complement(399..974)
                     /locus_tag="VIQ99_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015260274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEY9181866.1"
                     /translation="MPLEWIDYRVAATLYHSDQVAYSCGSPLYRIRGGYCAKTGARSI
                     VEVNSIIATHGDTHTLERNRERYTPPLNNRTLFRRDANLCMYCGLQFRVSDLTRDHIT
                     PISRGGRDAWTNVVTACRRCNNHKGGRTPEEAKLQLVAVPFTPTYAEYIYLKGRRVLA
                     DQMEYLLTHFPRTSPLHARLRDALAEVQRSA"
     gene            1216..2349
                     /locus_tag="VIQ99_01630"
     CDS             1216..2349
                     /locus_tag="VIQ99_01630"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016352656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEY9181867.1"
                     /translation="MPLSIGVLKETFAHEARVALTPDVAAKLVELGAVVSIERGAGDH
                     SHLRDDSFKGVQILADAAHVLAASTVLLKVQPPTLNEIDALPVGAVVIGFMQPHVQQD
                     MVRRLRDRKITSFAVELIPRISRAQSMDALSSQAAAAGYKAALLAANALDKFLPMLTT
                     AAGTIRPAQVLVIGAGVAGLQAIATARRLGAIVEAYDVRAATKEQIQSLGAKFVDTGV
                     AAEGTGGYARELTADEKAKQQAILDKHIAKADAVITTAAIPGRTAPRIISKQAVAAMS
                     AGAVIVDLAAESGGNCELTVAGETVVTSNGVKILGPRNLPSELARHSSQMYARNLLNF
                     LAPAIKNGALAIDWQDEVFAQSVLTHDGQVRHPGTAKLLEAAR"
     gene            2363..2653
                     /locus_tag="VIQ99_01635"
     CDS             2363..2653
                     /locus_tag="VIQ99_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015260276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HEY9181868.1"
                     /translation="MIDGFIALYIFMLAAFTGYEVIARVPVILHTPLMSGSNFVHGIV
                     LVGAMVAMGRADTTLEIAIAFVGVVLAAGNAVGGYAVTERMLEMFKSSKGKR"
     gene            2653..4041
                     /locus_tag="VIQ99_01640"
     CDS             2653..4041
                     /locus_tag="VIQ99_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006786191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY9181869.1"
                     /translation="MDAVAAGTLIQASYFVAALLFILGLKRMSSPVTARSGIVWAGIG
                     MVVATLITFLTPGMGNFGLITVAIAVGGIAAWVTGRRVAMTDMPQMIALYNGMGGGAA
                     GAIAAVELFAAEVHSPAVLTLGVLGGIIGAVSFSGSVIAFAKLQGLIKRSVRFRGQNV
                     VNLLIVAGTVVTGAIIVVHGSDDMQNHVTLLFVLALVLGVTMTLPIGGADMPVVISLY
                     NALTGLAVAFEGFVLNNAAMIIAGTVVGSAGTLLTQLMAKAMNRSLGNVLFSGFGEAA
                     AAGAVAGPSGTLKAIDTPDVAVMLGFSEKVIVVPGYGMAVAQAQHKVWELCQALIARG
                     VTVKFAIHPVAGRMPGHMNVLLAEAGVPYDLIYDESEINAEFETADVALVIGANDVVN
                     PVARTDKSSPIYGMPILNADKAKNVIVIKRGQGAGFSGIENALFYLDHARMLYGDGQA
                     KAGELVQAVKAL"
     gene            complement(4046..>4546)
                     /locus_tag="VIQ99_01645"
     CDS             complement(4046..>4546)
                     /locus_tag="VIQ99_01645"
                     /inference="COORDINATES: protein motif:HMM:NF022748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3106 domain-containing protein"
                     /protein_id="HEY9181870.1"
                     /translation="VPKSSRRMRIMKANRVVAVCIALFAFAGAAHAQGIAWDDLSDAQ
                     RRLLAPHEQRWAELDPQRQQQIARGAERWLEMNGRDRVQARDRFEIWSNMTDEQRAAA
                     RNRYRQFRSLPPAERQQLLDTYRRYRMMPPERRMELRERFRELTPEQRQRLREQRQLR
                     PPPAPR"
BASE COUNT          765 a         1481 c         1497 g          803 t
ORIGIN      
        1 tcgaagcacg cacgtttccg cccggcgatt gggatccgca gaacgtcgcc gcgtgcggca
       61 cgtttttcga gttgacccta ccggccgagt cgctcgacgt ctcgacgcgg ttctggcagc
      121 ggctcgggtt cgcaccgctc acggccggtg atgagcctca ccgctggcag cgactcaggg
      181 gcttcggcgt ggacataggg ctccacgaga cgcactgtgc tcccggattg agctttcgct
      241 gcccagacat cgcggcccgg agcgagtatc tgcgcgcgaa gggcgtgaag cttcgtgccg
      301 gcacgccgct cgcggacagc gcgcaaccgt cggcgacgct gacggcgccg gagggcacgg
      361 tgctctatct cttcgagagc ggcgcgcaat gagccgcctc acgcgctgcg ttgaacctcg
      421 gcgagcgcgt cacgcagccg cgcatgcagc gggctcgtgc gcgggaagtg cgtgagcagg
      481 tactccatct gatcggccag cacgcggcga cccttcaaat agatgtactc ggcgtaggtc
      541 ggcgtgaacg gtacagccac gagctgcagc ttcgcctctt ccggcgtgcg gccgcctttg
      601 tggttgttgc accggcggca cgccgtgacg acgttcgtcc acgcgtcgcg tccaccgcgg
      661 ctgatcggcg tgatgtggtc ccgcgtgaga tcgctgacgc ggaactgcaa tccgcagtac
      721 atgcagaggt tcgcgtcgcg ccggaacagc gtgcgattgt tcaacggcgg cgtatatcgc
      781 tcgcggttgc gctcgagcgt gtgcgtgtca ccgtgagtcg cgatgatcga gttcacctcg
      841 acgatgctgc gtgcgccggt cttggcgcag tagccgccgc gaatccgata caacggggaa
      901 ccgcacgaat aagcgacctg atcactgtga tacaaagtcg ccgcgacgcg gtaatcgatc
      961 cactcgagtg gcattcccgc gacatcggtc cgcaacactt cttgcgtcaa cgcgtacaac
     1021 tgtctcgcct ctagaacacc accggatgga tcttcttgaa acgcgccaag tttctccgag
     1081 aggtcgccaa gattcaatgg cctgcacgac agctttgtgt catgatctcg tttcgatcag
     1141 gccagccgaa tccgcttgac gcgttgcctt gccgcaacgt ccgtctgcca gatccacgat
     1201 aggtcggagc gtcggatgcc acttagtatc ggtgtgctga aggagacctt tgcccacgag
     1261 gcacgtgtcg ccttgacgcc cgacgtagcg gccaagctcg ttgagctcgg cgccgtcgtg
     1321 agcatcgagc gcggcgccgg ggaccacagc catctccgcg acgactcgtt caagggggtc
     1381 cagatccttg ccgacgcggc gcacgtgctt gcggcctcca cggtgttgct gaaggtccag
     1441 ccgccgacgt tgaacgagat cgacgcgctg ccggtcggcg cagtggtcat cggcttcatg
     1501 cagccgcacg ttcagcagga catggtccgg cgcctccgcg atcgcaagat cacgagcttc
     1561 gcggtcgagt tgatcccgcg catctcccgc gcacaatcga tggacgcgct gtcgtcgcaa
     1621 gccgcggcag ccggttacaa ggccgcgctg ctcgcggcca acgcgctcga caagttcttg
     1681 ccgatgctga ccacggccgc cggtaccatt cgtccggcgc aggtgctcgt gatcggcgcc
     1741 ggcgtggccg gtttacaggc gatcgcgacc gcgcgccggc tcggcgcgat cgtcgaagcc
     1801 tacgatgtac gggcagccac gaaggagcag atccaatcgc tgggcgcgaa attcgtcgac
     1861 accggcgtcg cggcagaagg cacgggcggc tacgcgcgcg agctcacggc cgacgagaaa
     1921 gccaagcagc aggcgatact cgacaagcac attgcgaaag ccgacgccgt gatcacgacg
     1981 gccgcgatcc ccgggcgcac cgcaccgcgg atcatctcga aacaggccgt cgcagcgatg
     2041 agcgcaggcg ccgtgatcgt cgatctcgcc gcagagagcg gcggcaactg cgagctcacg
     2101 gtcgcgggcg agaccgtcgt gacgtcgaat ggcgtgaaga tcctggggcc gcgcaacctg
     2161 ccgtcggaac tcgcgcggca ttcgagccaa atgtatgccc gtaacctgtt gaacttcttg
     2221 gctcccgcga tcaagaacgg cgcgctcgcg atcgattggc aggacgaggt gttcgcgcag
     2281 tccgtgctga cgcacgacgg ccaggtccgg catccgggca cggccaagct attggaggcc
     2341 gctcgatgat cgatgccctc ttatgattga cggattcatc gcgctctaca tcttcatgct
     2401 cgcggcgttc acgggttacg aggtcatcgc gcgcgtgccc gtgatcctgc acacgccgct
     2461 gatgtcgggc tcgaacttcg tgcacggcat cgtgctcgtc ggcgcgatgg tcgcgatggg
     2521 ccgcgccgac accacgctcg agatcgcaat cgcattcgtg ggcgtcgtgc tcgcggccgg
     2581 caacgccgtc ggcggatacg cagtgaccga acgaatgctc gagatgttca agagcagcaa
     2641 gggcaaacgc tgatggacgc ggtcgcggcc ggcacgttga ttcaggcgag ctacttcgtc
     2701 gccgcgctgt tgttcatctt gggcctgaag cgaatgagct cgcccgtcac ggcgcgcagc
     2761 ggcatcgtgt gggccggcat cggcatggtc gtcgcgacgt tgatcacgtt cctgacgccg
     2821 ggcatgggca acttcggcct gatcacggtc gcgattgccg tgggcggcat cgcggcgtgg
     2881 gtcacgggcc ggcgcgtcgc gatgacggac atgccacaga tgatcgcgct ctacaacggc
     2941 atgggcgggg gcgccgccgg cgcgatcgcc gccgtggagc tgttcgccgc agaggtgcac
     3001 agccccgccg tgctcacgct cggtgtgctc ggcggtatca tcggcgccgt atcgttctcg
     3061 ggcagcgtca tcgcgttcgc gaagctgcaa ggcctgatca agcgcagcgt gcgcttccgc
     3121 ggccagaacg tcgtgaatct gctgatagtc gccggcaccg tcgtgacggg cgcgatcatc
     3181 gtcgtgcatg gcagcgacga catgcaaaat cacgtcacgc tgttgttcgt cctcgcgctc
     3241 gtgcttgggg tcacgatgac gctgcctatc ggcggcgccg atatgccggt cgtgatctcg
     3301 ctgtataacg cgctcaccgg tctcgcagtc gcgttcgagg gcttcgtcct caacaacgcc
     3361 gcaatgatca tcgcgggcac ggtcgtcggc tcggccggca cgctgttgac gcagctgatg
     3421 gcgaaggcca tgaatcgctc gctcggcaac gtgcttttca gtggcttcgg cgaggcggcc
     3481 gcggcaggcg cggtggcggg gccctccggc acattgaaag cgatcgacac gcccgacgtc
     3541 gccgtcatgc tcggcttctc ggaaaaggtc atcgtcgtgc cgggatacgg catggccgtc
     3601 gcgcaagcgc agcacaaagt gtgggagctc tgccaggcgc tgatcgcgcg cggcgtcacc
     3661 gtaaagttcg cgatccaccc cgtggccggc cgcatgccgg gccatatgaa cgtgctgctc
     3721 gcggaggccg gcgtgcctta cgacctgatc tacgacgaat ccgagatcaa tgccgagttc
     3781 gagacggccg atgtcgcgtt agtgatcggc gccaacgacg tcgtgaatcc cgtcgcgcgc
     3841 accgacaaat cgagcccgat ctacggcatg ccgatcttga acgccgacaa agcgaagaac
     3901 gtgatcgtga tcaagcgcgg ccagggtgcg ggtttctcag gaatagaaaa cgcgctgttc
     3961 tatctggatc acgcccgcat gctgtacggc gacggccagg ccaaggccgg cgagctagtg
     4021 caggcggtga aggcactata gccggttaac gcggagccgg cggcgggcgc agctgtcgct
     4081 gctcgcgcag cctttgtcgc tgctccggcg tcagctcgcg gaaccgctcg cgcagctcca
     4141 ttcgccgctc gggcggcatc atccgataac gccgatacgt gtcgagaagc tgctgacgct
     4201 ccgccggcgg caagctccgg aattgccgat accgattgcg ggccgcggcg cgttgctcgt
     4261 cggtcatgtt gctccagatc tcgaaccggt cgcgggcctg cacgcgatcg cgtccgttca
     4321 tctcgagcca acgctcggcg ccgcgcgcga tctgttgctg gcgctgcgga tcgagctcgg
     4381 cccaacgctg ctcatgaggc gcgagcagac gccgctgcgc gtcgctcaga tcgtcccatg
     4441 caatgccctg cgcgtgcgcc gcgccggcga acgcgaacaa tgcgatgcac accgcaacga
     4501 ccctattcgc cttcatgatc ctcatccttc ggctgctctt cgggac
//
LOCUS       DATCUD010000113         1764 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79394, whole genome shotgun sequence.
ACCESSION   DATCUD010000113 DATCUD010000000
VERSION     DATCUD010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79394"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1199)
                     /locus_tag="VIQ99_01650"
     CDS             complement(<1..1199)
                     /locus_tag="VIQ99_01650"
                     /inference="COORDINATES: protein motif:HMM:NF012343.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEY9181871.1"
                     /translation="MAHAGDPALRVDRELVVAHAFAALATLLIAVVFGIFVSLQFLFP
                     DLAGGWLPAGWGRLRYAHTQGIMLGWLGNAFLAFLYHAVPVLTGRAVSSAALGRWLFG
                     VWNLGVVVPGFVLVLAGVSQPLEWAEFPLAVDAFAIVGLGLAALQFLPPFFRDGFETL
                     YVSSWYVIGSLVFTLLAFPMGNLVPELVPGAAGAAFSGLWIHDAVGLFVTPLALAILY
                     FVIPAATGRPIFSHFLSMLGFWGLFFLYPLNGTHHYVYSAIPMTAQIGAIAASALLGI
                     IVIIVVTNLLLSLRGAGVFPRDPALRFVATSTVFYVIVSVQGSLQAQMSLNQAVHFTD
                     WVIGHSHLAMLGFATFAALGGLVHVWQRLPAARYNARAIEWAYHLLVVGVVLMVVDLT
                     IAGLVEAR"
     gene            1331..>1764
                     /locus_tag="VIQ99_01655"
     CDS             1331..>1764
                     /locus_tag="VIQ99_01655"
                     /inference="COORDINATES: protein motif:HMM:NF016184.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur transferase domain-containing protein"
                     /protein_id="HEY9181872.1"
                     /translation="MKTTILSGTGLSRTLLAVLACSAAAVALAQSAELPNRRDVLEGI
                     TSAGQPSAAALEAAAAAGYKSVIDLRAVTEDRGFDERAKVEGLGMSYVNLPVDGAAGV
                     SYANASALDKLLAEAPKPVLVHCASGNRVGALLALRAKTDGA"
BASE COUNT          373 a          603 c          580 g          208 t
ORIGIN      
        1 cgcgcctcca cgaggccggc aatcgtgagg tcgacgacca tcagcacgac accgaccacg
       61 agcaggtggt aggcccactc gatcgccctc gcgttgtaac gagccgccgg cagccgctgc
      121 cacacgtgca cgaggccgcc gagagccgcg aacgtcgcga aaccgagcat cgcgaggtgc
      181 gagtggccga taacccaatc cgtgaagtgc acggcctggt tcaagctcat ctgtgcctgc
      241 agcgagccct gcacgctcac gatcacgtag aacaccgtcg acgtcgcgac gaaccgcaga
      301 gccggatcgc gcgggaacac gccggcgccg cgcaacgaca gcagcaggtt cgtcaccacg
      361 atgatgacga tgatgccgag cagggccgat gccgcgatgg ccccgatctg ggccgtcatc
      421 ggaatcgccg aatacacgta gtggtgggtg ccgttcaaag ggtagagaaa gaacagcccc
      481 cagaagccca gcatcgacaa gaagtggctg aagatcggcc gccccgttgc ggccggaatc
      541 acgaaataga gaatcgccaa cgccaggggc gtgacgaaca gacccaccgc atcgtggatc
      601 cacaagccgc tgaatgcggc tccggccgcg ccgggcacga gctcgggcac gagattgccc
      661 atcgggaacg cgagcagcgt gaagaccagc gaaccgatca cataccagct cgacacgtac
      721 agggtttcga agccatcacg gaagaacggc ggcaagaact gcagcgccgc gagcccgagc
      781 cccacgatcg cgaacgcgtc gaccgccagc ggaaactcgg cccactcgag cggctggctg
      841 accccggcca gcacgagcac gaatccgggc acgaccacgc cgaggttcca aacaccgaac
      901 aaccagcggc cgagcgccgc gctgctcacg gcgcggcccg tgagcaccgg caccgcgtgg
      961 taaagaaacg cgaggaacgc gttgccgagc caaccgagca tgatcccttg ggtgtgcgcg
     1021 tagcgcagtc gcccccagcc ggcaggcaac cagccccccg cgaggtccgg aaacaagaac
     1081 tgcagcgaga cgaagatgcc gaagacgacg gcgatcagca gcgtcgcgag ggccgcgaac
     1141 gcatgtgcga cgacgagctc acggtcgacg cgcagcgccg gatcccccgc gtgtgccata
     1201 tggttcttgc cctacccgag gcggccgccg acgtgcttca ttttacatgc cgcggcggcg
     1261 cggccgacca ttgagcgacc aggcaggaac gacgacaatt gtcgtatcgc acctcggcac
     1321 gggactcacg atgaaaacca cgatactttc cggaaccggc ctctcgcgca ccctcctcgc
     1381 ggtgctcgcg tgctccgcgg cggccgtcgc actcgcgcaa tcggcggagt tgccgaaccg
     1441 gcgcgacgtg ctcgagggaa tcacctcggc cgggcagccg agcgcagcgg cactcgaagc
     1501 ggccgcggcg gccggctaca agagcgtgat cgatctgcgc gctgtgaccg aggaccgtgg
     1561 cttcgacgag agggccaagg tcgaaggcct cggcatgagc tacgtgaacc tgcccgtgga
     1621 cggagcggcc ggcgtgtcgt acgcgaacgc gagcgcgctc gacaagctgc tcgccgaggc
     1681 accgaagccc gtgttggtgc attgcgcgag cggcaatcgt gtgggcgcgc tactcgccct
     1741 gcgcgcaaag acggacggcg ccga
//
LOCUS       DATCUD010000114         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_50952, whole genome shotgun sequence.
ACCESSION   DATCUD010000114 DATCUD010000000
VERSION     DATCUD010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50952"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VIQ99_01660"
     CDS             complement(<1..621)
                     /locus_tag="VIQ99_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181873.1"
                     /translation="MRFRLLLGSTLVLAAPLASAQEWDWTLTPYLWASGIDGDASVGP
                     VQADLSVNFGDIVDVLAGAALMHVEAQTDDHGYFGDLVYLATEIDEERVRTELDTTIV
                     ELGYLRRTSRIGLEFGIRYWDFDLEIDPTTLPTAQGESDWVDGFVGIRSVRELGDKWN
                     LTTRANIGAGGTDFTYGVGVIFGREIGSSGQFVAGLKLLDIDYEDTT"
     gene            complement(692..>1533)
                     /locus_tag="VIQ99_01665"
     CDS             complement(692..>1533)
                     /locus_tag="VIQ99_01665"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEY9181874.1"
                     /translation="DLEPRLYTSAPTGLNFVAVAYSASQGGVLFDPSVPLEDANVDID
                     GPALAYVRSLGLWDKAAKFDALLPHACLDGYATFNGAIVTRDVCGYADPRFRLSVNFH
                     GAPALAPREFAAFEQDFIVGASVQITAPWGQYDDDRLVNIGTNRWSIKPEIGLSKNLE
                     HIAFEMAAAVTLYDDNDDFVNGTLQIDPIYSLQTHVVHVFKRGAWLAGDATHYRGGRS
                     TVGDSSRDDLQENWRLGVTFGMPLSRNQTLRVHASSGVSTRTGTDFDTVAVAWQFRWV
                     SGS"
BASE COUNT          278 a          501 c          479 g          275 t
ORIGIN      
        1 cgtcgtgtcc tcgtagtcga tgtcgagtag cttcaatccc gcgacgaatt ggccgctcga
       61 gccgatctcg cggccgaaga tcacgccgac gccataggta aagtccgttc cgccggcgcc
      121 gatgttcgcg cgcgtcgtca agttccactt gtcgccgagc tcgcgcacgc tgcggatgcc
      181 gacgaatccg tcgacccagt cgctttcgcc ctgagcggtc ggcaacgtcg tcggatcgat
      241 ctcgagatcg aagtcccagt agcgaatccc gaactccagg ccgatacgtg aggtgcggcg
      301 caaataaccg agctccacga tcgtcgtgtc gagctcggtc cgcacccgtt cttcgtcgat
      361 ttccgtcgcc agatagacca agtcgccgaa atacccgtgg tcgtcggttt gtgcctcgac
      421 gtgcatcaac gcggcgcctg caagaacgtc gacgatgtcg ccgaaattca cgctcagatc
      481 ggcctgaacc ggcccgacac tcgcgtcgcc atcgatgccc gaggcccaga ggtacggtgt
      541 caatgtccaa tcccattcct gcgcgctcgc gagcggcgcg gccaacacca acgtcgagcc
      601 cagcagcagc ctgaatctca ttgcggagtc ctgtgaagag ggacccgcat gataccggac
      661 gcggcgcggc cgcgataatt gcggcaaatg cttacgatcc ggaaacccag cgaaactgcc
      721 aggcgaccgc gacggtgtcg aagtcggttc cggttcgcgt cgatacgccg ctgctcgcgt
      781 gcacgcgcaa cgtctgattt cggctcagcg gcatgccgaa cgtcacgccg agcctccagt
      841 tttcctgcag atcgtcgcga ctcgagtcgc cgaccgtcga gcggccaccg cgatagtggg
      901 tcgcatcgcc ggcgagccac gcgccgcgct tgaacacgtg cacgacgtgt gtttgcaacg
      961 agtagatcgg atcgatttgc agcgtgccgt tcacgaagtc gtcgttgtcg tcgtagagcg
     1021 tgacggcggc cgccatctcg aaggcgatgt gctcgaggtt cttcgacaac ccgatctcgg
     1081 gcttgatcga ccagcggttc gtgccgatgt tcacgagccg gtcgtcgtcg tactggcccc
     1141 acggtgccgt gatctggacg ctcgcgccga cgatgaaatc ctgctcgaac gctgcgaatt
     1201 cccgcggtgc gagcgcaggt gcaccatgga agttcacgga caggcggaat ctcggatccg
     1261 catagccgca gacgtcgcgc gtcacgatcg cgccgttgaa cgtcgcataa ccatcgaggc
     1321 acgcgtgcgg cagcagcgcg tcgaatttgg cggccttgtc ccacaggccg agagagcgca
     1381 cgtacgcgag cgcggggccg tcgatgtcga cgttcgcgtc ctcgagcggc acggacggat
     1441 cgaacagcac gccgccctgc gaggccgagt aggcgactgc gacgaagttc aagcccgtcg
     1501 gcgcgctcgt gtagagtctc ggctcgaggt ctt
//
LOCUS       DATCUD010000115         3427 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_72251, whole genome shotgun sequence.
ACCESSION   DATCUD010000115 DATCUD010000000
VERSION     DATCUD010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72251"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            276..1490
                     /locus_tag="VIQ99_01670"
     CDS             276..1490
                     /locus_tag="VIQ99_01670"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9181875.1"
                     /translation="MTIGRTLILAFTALASQAALAQREVPFRMGIPVAPSGLADKPLG
                     TGPFDYATGEGQNIRVTVLTKALSFPFTLTFLPDATMLITQRDGKLRVMRNGVLDPNP
                     VAGGPPSFSTGTSGLPGAVHGYMDIALHPQFAQNQALYLSYTKPLGDNRTTFAITRAR
                     WTGSALADAKDVFVAEPGDGGPTVLAFGRDGMLYVATSGGDAQAPGNLGGKVLRLRDD
                     GSVPNDNPFVGKLGFRPEIYTLGHRNSLGIALHPTTGEIWQSENGPNGGDELNVIRAG
                     KNYGWPLVSYGRTYPGPWQAKLPTHEGFEPPVVYWTPAIAVSGFTFYTGDRLPLWKGD
                     VFVGGLRTGEIPGTGKLDRILFNQNMEELRRESLLVDLRQRIRDVQQGPDGLLYVITD
                     EDEGAVLRIEPR"
     gene            1578..2603
                     /locus_tag="VIQ99_01675"
     CDS             1578..2603
                     /locus_tag="VIQ99_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181876.1"
                     /translation="MKLPRVSLAGVGTLAALCAALLPVHAQQTTAYTVPRTPWGDPDL
                     QGKWPGTDMVGVPMQREERFGTRNVLTDEEFAEREQRAARQTELDNADFEIENAASTP
                     GGDVGGAVSPPPHWLERGQPQRQASLIVDPPNGRMPAFTPQAQERQAALRAYRESRGP
                     ADSYTDRSNYDRCITRGLAGSILPVIYNNGTQIFQAPGYVAIVNEMIHETRIVPLDGR
                     PHAGSDIKMWLGDSRGRFEGDTLVVETTNFTDRTGVGVNGGGQRHSEALKITERFTRV
                     ADDMIDYQMTIDDPETWTAPWTMQFPLKRDDGYGMFEYACHEGNLAMFNILSGHRADE
                     RAAAGKR"
     gene            2621..2998
                     /locus_tag="VIQ99_01680"
     CDS             2621..2998
                     /locus_tag="VIQ99_01680"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181877.1"
                     /translation="MLPRIAALVLASLLCALPVQAHHSWARYDGENVVTLTGTITSVE
                     WASPHVVMHFTVPSDDGDVIPWTMEMDPPTLLNRYGLRHDVLKPGMRVKLTGVPARSG
                     APMMRAVTIETEDGTVYRVSSRV"
     gene            3009..>3427
                     /locus_tag="VIQ99_01685"
     CDS             3009..>3427
                     /locus_tag="VIQ99_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015975928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181878.1"
                     /translation="MRAGLSLLSILATGAATSFAQAPPPAGFPGTPPPSPPAVIREFA
                     AESATVERGASTTLRWEALNAYSLTLEPGIGVVATRGARRVSPAATTTYTLTAMGPGG
                     GTTRRVTVTVPGTTPIQTSAANATHGRAAIPRLADGKP"
BASE COUNT          617 a         1157 c         1121 g          532 t
ORIGIN      
        1 tgtcccccga cgcggcgtgg cgcttgctgt gccgtggcga tcgcgggaag tgcggccgca
       61 acggccaaaa ccgcgatcca tttgaacacc gaaacctgcc gcatcttgcc ccccagcgaa
      121 cactgtaatt ctcgacgagc gctcgagaat cataacggag tcgcccaccc gaagcagcgc
      181 cggaatccaa atttctctag ggcacggcga cacgcgcacg tcttggggct tccacgttgt
      241 cgccctatac tgcggccttc aacctggggg acatcatgac catcggtcgc acattgattc
      301 tcgcgttcac cgcacttgcg tcgcaggccg cgctcgcaca gcgcgaggtc ccgttccgca
      361 tgggcatccc ggtcgcaccc tcgggcttgg cggacaaacc tctcggcacg ggtccgttcg
      421 actacgcgac cggcgaaggc cagaacatcc gcgtgaccgt gctcaccaaa gcgctgtcgt
      481 ttccgttcac gctgacgttc ctgcccgacg caacgatgct gatcacgcaa cgggacggta
      541 agctgcgtgt gatgcgaaac ggcgtgctgg atccgaatcc ggtcgcgggt ggaccgccgt
      601 cgttctcgac gggcacgtcg ggattacccg gcgccgtgca cggctacatg gatatcgcgc
      661 tgcatccgca gttcgcgcag aaccaagcgt tgtatctgag ctatacgaag ccgctcggcg
      721 acaaccgcac gacgttcgca atcactcgcg cacgctggac cggcagcgcg ttggccgacg
      781 ccaaagacgt gttcgtcgcg gagcccggcg acggcggccc gacggtgctc gcattcggcc
      841 gcgacggcat gttgtacgtc gcgacgagcg gcggcgacgc ccaggcaccc ggcaatctcg
      901 ggggcaaggt gctgcgtctg cgcgatgacg gcagcgtgcc gaacgacaac ccgttcgtcg
      961 gcaagcttgg gtttaggccg gagatctaca cgctcgggca tcgcaactca ctcggaattg
     1021 cgctgcaccc gaccaccggc gagatctggc agagcgagaa cggcccgaac ggcggcgacg
     1081 agctgaacgt catccgcgcc ggcaagaact acggctggcc gctcgtgagc tacggccgca
     1141 cctacccggg gccgtggcag gcgaagctgc ccacgcacga gggtttcgaa ccgccggtcg
     1201 tctattggac gccggccatc gcggtctcgg gcttcacgtt ctacaccggc gacaggctgc
     1261 cgctgtggaa gggcgacgtg ttcgtcggcg ggctgcgcac tggcgagata cccggcaccg
     1321 gcaagctcga ccgaatcctg ttcaaccaga acatggaaga gctccggcgt gagtcgctgc
     1381 tcgtcgatct gcgccagcgg atacgggacg tgcagcaagg accggacggg ttgctgtacg
     1441 tgatcaccga cgaggacgaa ggcgcggtgc tccggatcga gcctcgctag cgggaggaca
     1501 cacgtcgtgc ggcgcagcca cctgatcttc acggttgccg cgctgtcgtg tggcgcgggt
     1561 cgacgcggag gagcacgatg aagctcccac gagtctcgct ggccggcgtc ggcacgttgg
     1621 ccgcgctttg cgccgcgctt ctgcccgtcc acgcacagca aacgacagcc tatacggttc
     1681 cgcggacacc gtggggcgac ccggacctgc aaggcaaatg gcccggcacc gacatggtcg
     1741 gtgtaccgat gcaacgcgaa gaacgattcg ggactcgcaa cgtgctgacc gatgaagagt
     1801 tcgccgagcg cgagcaacgc gccgcgcggc aaacggagct cgacaacgcg gacttcgaga
     1861 tcgaaaacgc ggcgagcacg ccgggcggag acgtcggagg tgccgtgtcc cctcccccgc
     1921 actggctcga gcgtggtcaa ccgcagcgcc aagcgtcgct gatcgtcgat cccccgaatg
     1981 gccgcatgcc ggcgttcacg ccgcaggccc aagaacgtca agccgcgctg cgcgcgtatc
     2041 gcgagagccg cggccccgcc gactcgtaca ccgaccgcag caattacgat cgttgcatca
     2101 cacgcggcct cgccggctcg atcttgcccg tgatctacaa caacggtacg cagatcttcc
     2161 aggcgccggg ctacgtcgcg atcgtgaacg agatgattca cgagacgcgg atcgtgccac
     2221 tcgacggtcg accgcacgcc ggctccgaca tcaagatgtg gctcggcgat tcgcgcggtc
     2281 gcttcgaagg cgacacgctc gtggtcgaga cgacgaactt cacggaccgc accggcgtcg
     2341 gcgtcaacgg cggaggtcag cggcatagcg aggcgctgaa gatcaccgaa cggttcacgc
     2401 gcgtcgccga cgacatgatc gactatcaga tgacgatcga tgacccggag acctggaccg
     2461 cgccgtggac gatgcagttt ccactgaagc gtgacgacgg ctacggcatg ttcgagtatg
     2521 cctgccacga gggcaatctc gcgatgttca acatcttgag cggtcaccgg gccgacgagc
     2581 gcgctgcggc cggcaagaga tgagacgcga tcggcttccg atgctgccgc gaatcgcggc
     2641 gctcgtgctc gcgagcctgc tctgcgcgct ccccgtgcag gcgcatcatt cgtgggcgcg
     2701 ctacgacggc gaaaacgtgg tcacgttgac gggcacgatc acgtccgtcg agtgggcgag
     2761 ccctcacgtg gtcatgcact tcaccgttcc gtccgatgac ggcgacgtga tcccgtggac
     2821 catggaaatg gatccgccga cgctgctgaa ccgctacggt ctgcgccacg acgtgctcaa
     2881 gcccggcatg cgagtaaagc tgaccggcgt gccggcgcga tccggagcgc cgatgatgcg
     2941 cgcggtcacg atcgagaccg aggacggcac ggtttatcgc gtgtcgagcc gcgtctaagg
     3001 actgacctat gcgagccggg ctctcgctac tgtcgattct cgccacgggc gcggctacgt
     3061 cgttcgcgca agcaccgccg ccggccggtt ttcccggcac gccgccgccg agcccgccgg
     3121 ccgtgattcg ggagtttgcc gccgagtccg caactgtcga acgcggtgcc tcgaccacgc
     3181 tgcgctggga ggcgctgaac gcttactcgc tcacgctgga gcccggtatc ggggttgtcg
     3241 caacccgcgg agcgcgccgc gtctcgccag cggcgacgac gacttacacg ctgacggcga
     3301 tgggccccgg cggcgggaca acccgccgtg tcacggtaac cgtgcccggc acgacaccga
     3361 tccaaacgtc cgccgcaaac gcgacgcatg ggcgggcggc gattccacgt cttgccgacg
     3421 gtaaacc
//
LOCUS       DATCUD010000116         3586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65181, whole genome shotgun sequence.
ACCESSION   DATCUD010000116 DATCUD010000000
VERSION     DATCUD010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3586
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65181"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            243..1076
                     /locus_tag="VIQ99_01690"
     CDS             243..1076
                     /locus_tag="VIQ99_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020683515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEY9181879.1"
                     /translation="MSNPCIITVAITGSVPTKKDSPAVPITVAEQIESTHASYEAGAA
                     LVHVHVRNDDGSTTSDPDKFGRFLAGIRKHCPDMIVQFSTGGRSGTGSKERGGMLPLK
                     PDMASLTTGSVNFAKIIYENHPSLINDLATGMLANDIKPEIEIFDLAMLYNAAKLVAD
                     GLLKAPVHVQFVLGIPGALPADRQVLEFELAQLNRMLPGATWTAAGIGRHQLTVNEWS
                     LELGGHCRTGLEDNVRFDKERLAVSNAELVQRVADMTREFGRTVATPAEARRILGLRA
                     A"
     gene            1089..1475
                     /locus_tag="VIQ99_01695"
     CDS             1089..1475
                     /locus_tag="VIQ99_01695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008246566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEY9181880.1"
                     /translation="MELVDLTILLALVEYCVMAALVGRARVKYNIAAPATTGHPDFER
                     VNRVHVNTLENLIIFVPAVWIFAQYTSETWAAVLGALFLIGRAIYAIGYIKAAEKRGV
                     GAGISGIANIVLIAGGLVGVVRALLA"
     gene            complement(1485..>3586)
                     /locus_tag="VIQ99_01700"
     CDS             complement(1485..>3586)
                     /locus_tag="VIQ99_01700"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9181881.1"
                     /translation="GSRSLVHEVLGAQLAVTALAGFIAVTGLAWTSGSVVRNNLEHWA
                     GQWADELNELGAPFYLTDAGGALLDVERFIAKYPEIERVTWYGAEGDALLSLDETGTT
                     ANAVTALATDVARELAARAGAQTSYLLTEDANGGQRYRLSGPIWTETLPEGALFADDP
                     AAVEATVELLGFVSVDLDFSAYESALWPRLAAASGVLLLLLAAWWFCGRWFLKNALAP
                     LSALQQSLGELAAGDTEVRFPSSPHSELRSIVQALEETTFALRKREQRLVHLANHDQL
                     TGLPNRHRLVAELNAELVRCAAEHARGALFFIDLDQFKYVNDTCGHASGDHLLQLAAQ
                     QLRYAIRAQDFLARFGGDEFVVLARDVSRHEAKVLAGKVLELMRGLKHVENERVFHLQ
                     CSIGVTAFHGDRISSHEVIAQADIACQSAKQRGRNRVEVYSPAGKQSEQIAKDVTMMN
                     LLRDALEHDRFELHYQPLMHIESGTISHYETLLRLPTDEGLIGPESLLPAAFRFGLMA
                     DIDRWVLRRVVRALAEIGPDADVKLSTNISGYAFEDEHLGAYLRSQLSDHSVSGDRLV
                     LEITEQLAVRFAANTDRQIAALRDLGCQLAVDDFGSGYSSFSYLKRLPVDYLKIDGSF
                     IKGLARDRVDQAMVRMVGEVARAAGMQTVAEYVHSAATLDQLAKFGIDYAQGYYIGEP
                     SAELPTAVVHEKRLARG"
BASE COUNT          605 a         1175 c         1203 g          603 t
ORIGIN      
        1 gcatcgcctt caagtggccg gcgtcgtcca gcacgaccac ggttacgggc ttgatcttca
       61 tcgcacgcgc tttctccagg gccttcgtaa cgatctgatt ggcttgagcg agcgtgagaa
      121 tgggcatggt cgagctccgt gaagcaacat caaggcgtgc agcatagccc cggtttcggc
      181 gttggcaagg cggtctcggc cgtggtggtg tgcccgaccg ccgtctagaa taccggtcca
      241 ccatgagcaa cccgtgcatc atcaccgtcg ccatcacggg ctcggtgccg accaagaaag
      301 acagcccggc agtaccgatc acggtcgcgg agcagatcga gtcgacgcac gcgtcgtacg
      361 aagccggggc cgcgctcgtg cacgtccacg tgcgcaacga cgacggcagc acgacgtccg
      421 atcccgacaa gttcggccgt tttctcgccg gcattcgcaa gcactgcccc gacatgatcg
      481 tgcaattctc gaccggcggc cgcagcggta ccggtagcaa ggaacggggt gggatgctgc
      541 ccctgaagcc cgacatggcc tcgttgacga ccgggtccgt gaacttcgcg aagatcatct
      601 acgagaacca cccgagcctg atcaacgatc tcgcgaccgg catgctcgcg aacgacatca
      661 agccggagat cgagatcttc gacctcgcca tgctctacaa cgccgcgaag ctcgtagcgg
      721 acggcttgct gaaggcaccg gtgcacgttc agttcgtgct cggtattccg ggcgcactgc
      781 ccgcggatcg gcaggtgctc gaattcgagc tcgcgcagct gaaccgcatg ctccctggcg
      841 cgacatggac ggcggccggc atcggccggc atcaattgac cgtgaacgaa tggtcgctcg
      901 agctcggtgg ccattgccgc accggtctcg aggacaacgt gcggttcgac aaggagcggc
      961 tcgccgtcag caacgcggag ctcgtgcagc gcgtggccga catgacgcgc gagttcggcc
     1021 gcacggtcgc gacgccggcc gaggcgcgcc ggatcctcgg tctgcgagcc gcgtagggga
     1081 gcgtgtcgat ggagctcgtt gatctgacga ttctgctggc gttggtcgag tactgcgtga
     1141 tggccgcgct cgtcggccgc gcacgcgtga agtacaacat cgccgcgccg gcgacgaccg
     1201 gccatccgga cttcgagcgc gtgaatcgcg tgcacgtgaa cacgctcgag aacttgatca
     1261 tcttcgtacc ggccgtgtgg atcttcgcgc agtacacgag cgagacgtgg gctgcggtgc
     1321 tcggcgcact gttcctgatc gggcgcgcga tctatgcgat cggctacatc aaggccgccg
     1381 agaaacgcgg cgtcggagcc ggcatcagcg gcatcgcgaa catcgtgttg atcgcgggcg
     1441 ggctcgtcgg cgtggtccgc gcattgttgg cgtagcggcc ggcctcagcc tcgcgcgagc
     1501 cgcttctcgt gcacgacggc cgtcggcagc tccgcggacg gctcgccgat gtagtagccc
     1561 tgcgcgtaat cgatgccgaa tttcgcgagc tgatcgagcg tggcggcgct gtgcacgtac
     1621 tcggcgacgg tctgcatgcc ggccgcccgc gcaacttcgc cgaccatccg caccatggct
     1681 tggtcgacgc ggtcccgtgc gagccctttg atgaacgacc catcgatctt cagatagtcg
     1741 acgggcaggc gcttcaagta gctgaacgag ctatagccgc tgccgaagtc gtccactgcg
     1801 agctgacagc cgagatcgcg tagcgccgca atctgccggt ctgtgttggc cgcgaagcgg
     1861 acggccagct gctcggtgat ctcgagcacg aggcgatcgc cggacacact gtgatcgctg
     1921 agctgcgagc gcaagtaggc gcccaagtgc tcgtcctcga acgcatagcc ggaaatgttc
     1981 gtgctgagct tcacgtccgc gtccggaccg atctcggcca gcgcccgcac gacgcggcgc
     2041 agaacccagc gatcgatgtc ggccatcagc ccgaagcgga acgcggccgg cagcagcgac
     2101 tcggggccga tgagcccttc gtccgtgggc aggcggagca gagtctcgta gtgcgagatc
     2161 gtgccgctct cgatgtgcat cagcggttgg tagtgcagct cgaaccggtc gtgctcgagc
     2221 gcatcgcgca gcaggttcat catcgtgacg tctttcgcga tctgctcgct ctgtttgccg
     2281 gcagggctgt agacctcgac gcggttccgt ccgcgttgct tggccgactg gcacgcaatg
     2341 tcggcctgtg cgatgacctc gtgtgagctg atgcggtcgc catggaacgc cgtgacgccg
     2401 atgctgcact gcagatggaa cacgcgctcg ttctcgacgt gcttcaagcc gcgcatcagc
     2461 tctagcacct tgcccgccag gaccttggct tcgtggcgcg acacatcgcg tgccaagacg
     2521 acgaactcgt cgccgccgaa gcgcgccagg aagtcctgcg ctcgaatcgc gtagcgcaac
     2581 tgctgtgccg cgagctgcaa caggtgatcg ccggacgcgt gcccgcaggt gtcgttcacg
     2641 tacttgaact gatcgaggtc gatgaagaat agagcgccgc gggcgtgctc ggcggcgcag
     2701 cgcacgagct ccgcgttcag ctccgcgacg aggcggtgcc gattcgggag gcccgtgagc
     2761 tggtcgtggt tcgcgaggtg gacgagccgt tgctcgcgtt ttctgagcgc gaacgtggtc
     2821 tcctcgagcg cctggacgat cgagcgcagc tcggagtgcg gcgagctcgg gaagcgaacc
     2881 tcggtgtcgc cggcggcgag ctcccccagc gactgttgca gcgctgatag cggagcgagc
     2941 gcgttcttca ggaaccaccg cccgcagaac caccacgcgg ccagcagcag caacaggacg
     3001 ccgctggcgg ccgcgaggcg cggccacaat gcgctctcgt acgcggaaaa gtcgaggtcg
     3061 acgctgacga agccgagcag ttcgaccgtc gcctcgactg ccgccgggtc gtccgcgaac
     3121 agcgcccctt cgggcagcgt ctcggtccag atcggccccg acagacgata gcgctgcccg
     3181 ccgttcgcat cttcggtgag gaggtacgag gtctgagcgc cggcgcgcgc ggcgagctcg
     3241 cgcgcgacgt cagtggccag cgccgtgacc gcgttcgcgg tcgtgccggt ctcgtcgagc
     3301 gacagcaacg cgtcgccctc ggcgccatac cacgtcacac gctcgatctc gggatacttc
     3361 gcgatgaagc gttcgacatc gagcagtgcg ccgccggcgt ccgtcagata gaacggcgcg
     3421 ccgagctcgt tcaactcgtc ggcccattgt ccggcccagt gttcgaggtt gttgcggacg
     3481 acggacccgg acgtccaggc gagcccggtg acggcgatga agcccgcgag cgcagtcacg
     3541 gcgagctgcg cccccagcac ttcgtgcacg agactgcggc tgccgg
//
LOCUS       DATCUD010000117         1609 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_93624, whole genome shotgun sequence.
ACCESSION   DATCUD010000117 DATCUD010000000
VERSION     DATCUD010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93624"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /gene="ccsA"
                     /locus_tag="VIQ99_01705"
     CDS             complement(<1..563)
                     /gene="ccsA"
                     /locus_tag="VIQ99_01705"
                     /inference="COORDINATES: protein motif:HMM:NF013725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY9181882.1"
                     /translation="MKLPRWFHQLGSPPYVYRLADRLCPWLGGIGVVLLAVGAVWGLV
                     VAPSDYQQHEVYRIIYIHPQAAYVGMMAYVVMAAAAAIGYVWRMKLAHAVAVSAAPIG
                     AWFTFCALFTGAVWGRPTWGTYWQWGDPRIMFEALLLFLFLGYLALRGAFDDRDKADR
                     VTAILAVVGVVNIPIVHFSVEWWNSIH"
     gene            complement(572..1237)
                     /gene="ccmB"
                     /locus_tag="VIQ99_01710"
     CDS             complement(572..1237)
                     /gene="ccmB"
                     /locus_tag="VIQ99_01710"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003441898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEY9181883.1"
                     /translation="MSVFSAVLARDLRVAFRRWSELAHPLIFFSIVVTLFPLALSPEG
                     SQLRDIGTGVLWVATFLSSLLALDGLFRGDADDGSLEQLVLSPVPLTIAVLAKVVAHA
                     LVTLLPLICLVPFTAYTFNIPSAAVPTLVLALLLAAPTLSVLVALGAALTVGLRRGGS
                     IVGLLVLPLTSPLLIFGTRATDLSINGEPTAAPLLLLGALAALAVSLGPLAIAAAVKV
                     GLE"
     gene            complement(1237..>1609)
                     /locus_tag="VIQ99_01715"
     CDS             complement(1237..>1609)
                     /locus_tag="VIQ99_01715"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9181884.1"
                     /translation="YRGHLEALKRDLTVVENLGFHAALWGREPEFGRVLEELKLGQVA
                     HMRARYLSAGQRRRVALAMLQLSGAKLWLLDEPTTNLDSEGRAVLGAWTRRHVAEGGL
                     AVIATHQPEEFAMPGALMIEL"
BASE COUNT          355 a          538 c          491 g          225 t
ORIGIN      
        1 tggtggatcg agttccacca ctcgaccgaa aagtgaacga tcgggatgtt gacgacgccg
       61 acgactgcaa ggattgccgt cacgcggtcg gctttgtcgc gatcgtcgaa cgcgccccgc
      121 agagcgaggt agcctaggaa caagaacagc aacagggctt cgaacatgat gcgtggatcg
      181 ccccattgcc agtaagttcc ccacgtcggg cggccccaaa ccgcgcccgt gaacagcgcg
      241 cagaacgtga accacgcgcc gatcggcgcg gcactgacgg cgacagcgtg tgcgagcttc
      301 atgcgccaga cgtagccgat cgcggccgcc gcggccatca cgacgtacgc catcatcccg
      361 acatacgcgg cttgcgggtg gatataaatg attcgataga cttcgtgctg ctggtaatcg
      421 ctcggagcga ccacgagccc ccagaccgcg ccgacggcga gcagcacgac gccgatcccg
      481 cccagccatg ggcagagacg atcggccaac cgatagacgt agggcggcga gccgagctga
      541 tggaaccatc gcggtagctt catcgtcatt cctattcgag acccactttc actgcggccg
      601 cgattgcgag cggcccgagc gacacggcaa gcgccgcaag agcgccgagc agcagcaacg
      661 gcgcagccgt cggctcgcca ttgatgctga gatcggtggc gcgcgtcccg aaaatcagca
      721 acggactcgt caaaggcaac acgagcaatc cgacgatcga tccaccgcga cgcaatccga
      781 ccgtcagcgc ggcaccgagc gctacgagca cgctcagcgt cggcgccgcg agcaataagg
      841 ccagcacgag cgtcggcacc gctgccgaag gaatgttgaa cgtgtaggcc gtgaacggca
      901 cgagacagat cagcggcaaa agcgttacga gcgcatgcgc cacgactttg gcgagcaccg
      961 caatggtcag cggcacgggg ctcaggacga gctgctcgag actgccgtcg tcagcgtccc
     1021 cgcggaacaa accgtccaac gcgagcagcg acgacagaaa ggtcgccacc cacaatacgc
     1081 cggtgccgat gtcgcgtagc tgcgatccct caggcgacaa cgccaaagga aaaagcgtta
     1141 cgacgatgct gaagaagatc agcgggtggg ccagctcgct ccaccgcctg aaagcgacac
     1201 gcaagtcgcg cgcgagcacg gcactgaaga cgctcatcac agctcgatca tcaatgcgcc
     1261 gggcatcgcg aattcttcgg gctggtgcgt ggcaatcact gcgagccctc cttcggcgac
     1321 atggcgacgc gtccatgccc cgagcactgc tcgcccttcg ctgtcgagat tcgtcgtagg
     1381 ctcgtccagc aaccaaagct tggctcccga tagctgcaac atggccagcg ccacgcgccg
     1441 gcgttgaccc gccgacaagt aacgcgcacg catatgagcg acctggccga gcttcagttc
     1501 ctcgagaacg cggccgaact ccggctcgcg gccccacagc gccgcgtgaa accccaggtt
     1561 ctcgacgacc gtaaggtccc gtttcagcgc ttccagatgc ccacggtag
//
LOCUS       DATCUD010000118         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15553, whole genome shotgun sequence.
ACCESSION   DATCUD010000118 DATCUD010000000
VERSION     DATCUD010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15553"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..>1629
                     /locus_tag="VIQ99_01720"
     CDS             267..>1629
                     /locus_tag="VIQ99_01720"
                     /EC_number="2.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012969555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016744 - transketolase or transaldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY9181885.1"
                     /translation="MDAVEAARSGHPGMPMGMADIAEVLWNDYLKFNPANGHWHDRDR
                     FVLSNGHGSMLLYSAAYLTGYPLGLDEIKNFRQLGSRVAGHPERELALGVETTTGPLG
                     QGIANAVGMALAEKHLAAEFNRPDLDVVDHYTYVFLGDGCMMEGISHEACAFAGTHKL
                     GKLIAFYDDNGISIDGNTRGWFTDDTPKRFEAYGWHVVPNVDGHDPAAIAKAVDAARA
                     DEERPSLICCKTIIGYGAPNVQGTSATHGAALGPVEAAAARKNLGWAEPPFVIPGDVK
                     AAWDARERGARLEAEWQARFAAYRRLYPSLADEFTRRMQGELPANWRDHADKAIAAIA
                     AAGKTMATRKASQNALEAFAPALPELIGGSADLTGSNNTQHKHSSTLTPADAKGNYLF
                     YGVREFGMAAIMNGLAAHGGLVPYGGTFLVFSDYARNALRMAALMRLRTIYVFTHDSI
                     GLGE"
BASE COUNT          279 a          540 c          545 g          265 t
ORIGIN      
        1 cgcaatatcg tcctcgcggg cggggattcg ctcacattaa gtcgtgccga atttctcggt
       61 tgcgccgtgt gtctccgctg ggagacaatc gctgttcgtc tcgtttccac gccgcacgat
      121 ccgaggccgg cacgctcggc cgaggcaccg gcatcaattc aacaaagtcc acaacaacaa
      181 agccgatggc actgcgcagc gacaaccctt ccgctacggt ccggccgtcg cggcgccgcc
      241 tcgcaaacgc gatccggatg ttatcgatgg acgcggtcga ggccgcgcgc tcgggccatc
      301 ccggaatgcc gatgggcatg gccgacatcg cggaggtgct gtggaacgac tacctcaagt
      361 tcaaccccgc taacggtcat tggcacgatc gcgaccgctt cgtgttgtcg aacggtcacg
      421 gctcgatgct gttgtactcc gcggcttact tgaccggcta cccgctgggc ttggacgaaa
      481 tcaagaattt ccgtcagctc ggctcgcgcg tcgcgggtca tcccgagcgc gagcttgcgc
      541 tcggcgtcga gacgacgacc gggccgctgg ggcagggcat cgcgaacgcg gtcggcatgg
      601 cgctcgccga gaagcacctc gccgcggagt tcaaccggcc cgatttggac gtagtcgatc
      661 actacacgta cgtgttcttg ggcgacggct gcatgatgga aggcatctcg cacgaggcat
      721 gcgcgttcgc gggaacgcac aagctcggca agctgatcgc gttctacgac gacaacggca
      781 tctcgatcga cggcaacacg cgcggttggt tcacggacga cacgccgaag cgattcgagg
      841 cctacgggtg gcacgtcgtc ccgaatgtcg acggtcacga tcccgcggca atcgcgaagg
      901 ccgtcgacgc tgcgcgcgcc gacgaagagc ggccgtcctt gatctgctgt aagaccatca
      961 tcggctacgg tgcgccgaac gtgcagggca cgtccgcgac gcacggcgcc gctctcgggc
     1021 ccgtcgaggc cgccgcggcg cgcaagaacc tgggttgggc cgagccgccg ttcgtgatcc
     1081 cgggcgacgt gaaggccgcg tgggacgcgc gcgagcgcgg cgcgcgcctc gaggccgagt
     1141 ggcaagcgcg cttcgcggcg tatcgtcgct tgtaccccag cctcgcggac gaatttacac
     1201 ggcggatgca gggcgagctg ccggcgaatt ggcgcgacca cgccgacaag gcgatcgcgg
     1261 cgatcgcggc cgccggcaag accatggcta ctcgcaaggc gtcgcaaaac gcgctcgagg
     1321 cgttcgcgcc ggcgttaccg gagctgatcg gcggctcggc cgatctcacg ggctcgaaca
     1381 acacgcagca caagcattcg tcgacgctga cgccggccga cgcgaagggc aactatctct
     1441 tctacggcgt gcgcgagttc ggcatggcgg cgatcatgaa cgggctcgcc gcgcacggcg
     1501 gcctcgttcc gtacggcggc acgttcctcg tgttctcgga ctacgcgcgc aatgcgctgc
     1561 gcatggcggc gctgatgcgc ctgcgcacga tctacgtgtt cacgcacgac tcgatcggct
     1621 tgggcgagg
//
LOCUS       DATCUD010000119         2416 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86501, whole genome shotgun sequence.
ACCESSION   DATCUD010000119 DATCUD010000000
VERSION     DATCUD010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86501"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1319)
                     /locus_tag="VIQ99_01725"
     CDS             complement(<1..1319)
                     /locus_tag="VIQ99_01725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181886.1"
                     /translation="MNRTSRAAPLAAIVAAGSLLGCRPELEGSVGRGWPVTVMEFAFV
                     GGGLEGEGRQAAWDGAAPDGVTPLPIDLFTSKDFYKDVELWSDPRYFRCNSPSTLQAM
                     WGADLTTARVMIGTAPPASASWGHCEIDYPREAIVSPYPFKTAQEHYEALLAETKSRG
                     GPTVYTRDDPPPDWNGRYSRAISLQFIAKREGGTYETPDHLREPPQWFFTSINQTSTI
                     LSLLTPEYQKRTVQMHYHQSVNNAPLWPAQFCWPDGFTRLFSRQAHLSMDFVATPERL
                     QLMASSAENFIRHFNVGREFNLDGAVPRLGQDVPRWFGESIAFWDRDALIAWTSNVIP
                     WITHGVFEHSGAMQTVEIFTPRLDPAGELAGIEHEIVFYDPEALAQPLRLVQVHIKTG
                     ELGEVDPFIYGRCIQTIFPVEGRPVPLSPGVTIEYTVPDMFGRPWAQ"
     gene            complement(1376..>2416)
                     /locus_tag="VIQ99_01730"
     CDS             complement(1376..>2416)
                     /locus_tag="VIQ99_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase,
                     adenosylcobalamin-dependent"
                     /protein_id="HEY9181887.1"
                     /translation="PARELWERIADAAHAAAEPGVLFIDRINRTNNLYYAEQIAATNP
                     CGEVPLPPHGACVLGSLNLTAFVRNAFGSSADLDLAAVEAIVPTAVRMLDNAVELSSY
                     PLQLQAEQARATRRIGLGLTGLADALIMLGLRYDSDEARAFARTVVQRMRDAAYRASA
                     DLAQHKGSFARFDRDAYLDGEHARSLPGAIRDRIARCGLRNSHLLAIAPAGTISLLAN
                     NVSSGIEPVFAFEGERRLIDEHGVVETHTVRDYAYAQWSAAHTGALPPAFVTADELTP
                     ADHLEMLGALQPFVDSSISKTVNLPADTPRSAVAGIFERAYGLGAKGCTVFRPNAVTG
                     SVLERSGPCCRP"
BASE COUNT          403 a          819 c          817 g          377 t
ORIGIN      
        1 atctgcgccc acgggcggcc gaacatgtcg ggcacggtgt actcgatcgt gacaccgggg
       61 ctcagcggca ccgggcggcc ctcgacggga aagatcgtct ggatgcagcg gccgtagatg
      121 aacggatcga cctcgccgag ctcgccggtc ttgatgtgga cctgaacgag gcgcagcggt
      181 tgcgccagcg cctcgggatc gtagaacacg atctcatgct cgatgccggc cagctcgccg
      241 gccggatcga gccgcggcgt gaagatctcc acggtctgca tcgctcccga gtgctcgaac
      301 acaccgtgcg tgatccatgg gatcacgttc gaggtccacg cgatcagcgc gtcgcgatcc
      361 cagaacgcga tgctctcgcc gaaccaacgc ggcacgtctt gaccgagccg cggcaccgcg
      421 ccgtccaggt tgaactcgcg cccgacgttg aagtgccgga tgaagttctc ggcgctgctg
      481 gccatcagct ggagacgctc cggcgtcgcg acgaaatcca tcgacaggtg cgcttggcgc
      541 gagaacagcc gcgtgaaccc gtccggccag cagaactgcg cgggccacag cggcgcgttg
      601 ttcacggact ggtggtagtg catctgcacg gtgcgctttt ggtactccgg cgtcagcagc
      661 gagaggatcg tcgaggtctg gttgatcgac gtgaagaacc actgcggcgg ctcgcgcaga
      721 tggtcgggcg tctcgtacgt cccgccctcg cgcttcgcga tgaactgcaa cgagatcgcg
      781 cggctgtagc ggccgttcca gtcgggcggc ggatcgtcgc gcgtatacac cgtgggcccg
      841 ccacgagatt tcgtttccgc gagcagcgcc tcgtagtgct cctgcgccgt cttgaacgga
      901 tagggcgaca cgatcgcctc gcgcggatag tcgatctcgc aatggcccca cgacgcgctc
      961 gcgggcggag cggtgccgat catcacgcgc gcagtcgtga ggtcggcgcc ccacatcgcc
     1021 tgcagcgtcg acgggctgtt gcagcggaaa tagcgcggat ccgaccagag ctcgacgtcc
     1081 ttgtagaagt ccttgctcgt gaacaggtcg atcggcagcg gcgtgactcc gtccggcgcg
     1141 gcgccgtccc acgctgcctg ccgaccctcg ccctccaacc cgccgccgac gaaggcgaac
     1201 tccatgacgg tgaccggcca acctcgaccg acactgccct cgagctcggg cctgcaaccg
     1261 agcagcgagc ccgcagcgac gatcgccgcg agcggcgccg ccctcgacgt acggttcatt
     1321 gagcgtcccc cttggacgcg aagtttatac cgccccggtt actcgacgag tcgactcatg
     1381 gccgacagca cgggccgctg cgctccaaca cggatccggt cacggcattc ggccgaaaca
     1441 ccgtgcaccc ttttgcaccg agcccataag cgcgctcgaa aatcccggcc acggcgctgc
     1501 gcggcgtgtc ggccggcagg ttcacggtct tcgagatcga gctgtcgacg aacggctgga
     1561 gcgcgccgag catctcgagg tggtcggccg gcgtcagctc gtccgccgtg acgaacgcgg
     1621 gcggcaacgc tcccgtgtgc gcggcgctcc attgggcgta cgcgtagtcg cgcaccgtgt
     1681 gtgtctcgac gacgccgtgc tcgtcgatga ggcgccgctc gccctcgaac gcgaacacgg
     1741 gctcgatgcc gctcgagaca ttgttggcca gcaggctgat cgtgccggcc ggcgcgattg
     1801 cgagcagatg gctgttgcgc agaccgcacc gcgcgatgcg atcgcggata gcgcccggca
     1861 gcgagcgcgc atgctcacca tcgagatagg cgtcgcggtc gaagcgcgcg aacgagccct
     1921 tgtgctgggc gagatccgca gatgcgcgat aagccgcgtc gcgcatgcgc tgcaccacgg
     1981 tacgggcgaa agcgcgcgct tcgtcgctgt cgtagcgcag cccgagcatg atcaaagcat
     2041 cggcgagacc cgtcaaaccg agaccgatgc ggcgcgtcgc gcgcgcctgc tccgcttgca
     2101 gctgaagagg atacgacgag agctcgacgg cgttgtcgag catccgcacg gccgtcggca
     2161 cgatggcctc gaccgccgcg aggtcgagat cggcgctgct gccgaaggcg ttgcgcacga
     2221 acgccgtgag gttcaacgac ccgagcacgc aggcgccgtg cggtggcaac ggaacctctc
     2281 cgcaaggatt cgtggccgcg atctgctcgg cgtagtacag gttgttggtg cgattgatgc
     2341 ggtcgatgaa caacacgccg ggctccgcgg ccgcgtgagc ggcgtccgcg atccgctccc
     2401 acagctcccg cgcggg
//
LOCUS       DATCUD010000120         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_100658, whole genome shotgun sequence.
ACCESSION   DATCUD010000120 DATCUD010000000
VERSION     DATCUD010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100658"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VIQ99_01735"
     CDS             complement(<1..142)
                     /locus_tag="VIQ99_01735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005276622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HEY9181888.1"
                     /translation="MTVIANRRSVMTLFSKPTDPWSHRTRLVLAEKSITIDIVDVDDG
                     NLP"
     gene            complement(190..918)
                     /locus_tag="VIQ99_01740"
     CDS             complement(190..918)
                     /locus_tag="VIQ99_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016389964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEY9181889.1"
                     /translation="MRTAVAAFVLSAGLAATSFAQHEATLDPANNNPANVASLQRGAK
                     YFVNYCLGCHSAQYVRYNRLAQDLQLSEQQVIDNLMFTGERPFDTMAIAMRPEDSARW
                     FKVSPPDLSLIARSRGTDYIYTFLRSFYAAPGRPTGVDNIVLPGTAMPHVLWQLQGTQ
                     RAVFHTDEHNAQVFESFEMAVPGELAVEEFDEVVRDIVNFLDYIAEPIKRERQQLGIR
                     VIGFLLVFLLIAYMLKKEIWKDVK"
     gene            complement(915..2087)
                     /locus_tag="VIQ99_01745"
     CDS             complement(915..2087)
                     /locus_tag="VIQ99_01745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006889397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEY9181890.1"
                     /translation="MTKLIKEHATEYYASKNFNFWYGFGIIATVVLVLQLVTGIFLTM
                     NYKPSAAEAFASVEYIMRDVEWGWLIRYLHSTGASAFFIVVYLHMFRGLLYGSYKKPR
                     ELVWIIGMFIYLCLMAEAFFGYLLPWGNMSYWGAQVIVSLFGAVPGFGPELAEWIRGD
                     FYISDITLNRFFAFHVIAVPLMLVLLVVVHIMALHEVGSNNPDGVEIKEHKGPDGKPL
                     DGVAFHPYHTSKDLVIVIVFLILFSAVVFFAPDMGGYFLEHANFERADPLRTPEHIAP
                     VWYFTPFYAILRAVPDKLLGVALMGAAVMVLFFLPWLDRCRVKSIRYRSWITKVALMA
                     FAVTFVTLGYLGLQPATGNVPRLSLVFTIIYFSFFVFMPFYTRTEKTKPIPTRVTP"
BASE COUNT          477 a          655 c          675 g          385 t
ORIGIN      
        1 ccggcaggtt gccgtcgtcg acgtcgacga tgtcgatcgt gatgctcttc tcggccaaga
       61 ccaagcgcgt ccggtggctc cacggatccg tgggcttcga gaatagcgtc atcacagatc
      121 gacggttggc gatgaccgtc atgcgaccgg tctccttaac ttgcggggcc tggcgacgct
      181 tctggagggc tacttcacgt ccttccagat ttccttcttc agcatgtagg cgatgaggag
      241 gaacacgagc aagaatccga tcacgcgaat gccgagctgc tgccgctcgc gtttgatcgg
      301 ctcggcgatg taatcgagga agttcacgat gtcgcgcacg acctcgtcga actcttcgac
      361 cgccagctcc ccgggcaccg ccatctcgaa gctctcgaac acctgcgcgt tatgctcgtc
      421 cgtgtggaac accgcgcgtt gcgtcccttg gagttgccac aacacatgcg gcatcgcagt
      481 gccgggcaag acgatgttgt cgacaccggt cggccgaccg ggcgccgcat agaagctgcg
      541 caggaacgtg taaatgtagt cagtgccgcg gctgcgcgcg atcaatgaca gatccggcgg
      601 cgagaccttg aaccatcgtg ccgaatcctc gggccgcatc gcaatcgcca tcgtgtcgaa
      661 ggggcgttca cccgtgaaca tcaagttgtc gatgacctgt tgctccgaga gctgtaggtc
      721 ctgagcgagc cggttgtaac gcacgtactg cgccgagtga cacccgagac agtagttcac
      781 gaagtacttc gcgccgcgct gcaaggacgc gacgttcgcc gggttgttgt tcgccggatc
      841 gagcgtcgct tcgtgttgag cgaacgacgt tgcggcgaga ccggccgata gaacgaacgc
      901 tgcgacggcg gttctcacgg cgtcaccctc gtcgggatgg gtttggtttt ctcggtgcgc
      961 gtgtagaacg gcatgaacac gaagaacgag aagtagatga tcgtgaacac cagcgacagc
     1021 cgcggaacgt taccggtcgc cggctgcaag ccgagatagc ccagtgtcac gaacgtgacc
     1081 gcgaaagcca tgagcgcgac cttcgtgatc cagctgcgat aacgaatcga cttcacgcgg
     1141 caacgatcga gccacggcaa gaagaacagc accatcacgg ccgcacccat cagcgcgaca
     1201 ccgagcagct tgtccggcac cgcgcgcaag attgcgtaga acggcgtgaa gtaccacacg
     1261 ggagcgatgt gctccggcgt gcgcagcggg tcggctcgct cgaagttcgc gtgctcgagg
     1321 aaataaccgc ccatgtccgg tgcgaagaac acgacggccg agaacaagat caggaacacg
     1381 atcacgatca cgaggtcttt gctcgtgtga tacggatgga acgcgacgcc gtcgagcggc
     1441 ttgccgtcgg gccccttgtg ctccttgatc tcgacaccgt cgggattgtt cgagcccact
     1501 tcgtgcagcg ccatgatgtg gacgacgacg agcagcacga gcatcagcgg caccgcgatc
     1561 acgtggaacg cgaagaagcg gttcagcgtg atgtccgaga tatagaagtc gccgcgaatc
     1621 cattcggcga gctcgggacc gaagccggga accgcaccga acagcgacac gatgacctgt
     1681 gcgccccaat acgacatgtt gccccacggg agcagatagc cgaagaacgc ctcggccatc
     1741 aaacagaggt agatgaacat gccgatgatc cagacgagct cgcgcggctt cttataggag
     1801 ccatacagta ggccgcggaa catgtgcaga tacaccacga tgaaaaacgc cgaagcgccg
     1861 gtcgaatgca ggtagcggat caaccagccc cattcgacgt cgcgcatgat gtactcgacc
     1921 gacgcgaacg cttccgcggc cgagggcttg tagttcatcg tgaggaagat gcccgtcacg
     1981 agctggagca cgagcacgac ggtcgcgata attccgaaac cgtaccagaa attgaaattc
     2041 ttcgacgcgt aatactcggt ggcgtgctcc ttgatgagct tggtcatcgg gaagcggtcg
     2101 tcgatccacg cgccgagcgc ggaaagaccg cgacctagcc ggtcgaagac atcagcctcg
     2161 gtgctcgcca tctatgagtt ccccgtgtcg ga
//
LOCUS       DATCUD010000121         3402 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_22649, whole genome shotgun sequence.
ACCESSION   DATCUD010000121 DATCUD010000000
VERSION     DATCUD010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22649"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            115..855
                     /locus_tag="VIQ99_01750"
     CDS             115..855
                     /locus_tag="VIQ99_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011654677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9181891.1"
                     /translation="MTDDTLNNRVALVTGGGRGIGKGIAIALAVAGCDVAVNYVSREA
                     DALQTADAIRALGRRALVVHGDVSKSADVTAMVTAVEAGLGPVDILVNNAGRATFEGL
                     EQMTEASWNETLQVNLTSVFLMTQAVLPRMREHKWGRVINLTSVAAQAGSVMAVHYSA
                     AKAGVIAATKSYARLLAKEGVTVNAIAPALIGTEMVAGNPNIKPDMIPVGRFGRVEEC
                     ADVAVLLARNGYITGQTISVNGGMYFAA"
     gene            954..3305
                     /locus_tag="VIQ99_01755"
     CDS             954..3305
                     /locus_tag="VIQ99_01755"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HEY9181892.1"
                     /translation="MRTEALGAVALAGALVSGCGLVGNDGERQAAVVRGNCLDCHNAA
                     EQVADLNLEALSFDDVGAHAETWEKVIRKLRAGLMPPADGGPTLDRETREELVVFLEN
                     EIDENAAPHLPAPGLHRLNRTEYTNAIRDLLALDVDATKFLPPDDSSHGFDNMAGTLT
                     TSPALMEAYLSAAGKISRLAVGTETAPTLAVFDAPHDTSQNGYIEGLPFGTRGGMLIE
                     HEFPADGNYVFTVKGMTGYFTAVLGNVKGEQLEVTIDGVRAYLFDWDKEIAPNEGNGG
                     RTPEIPIKAGFHRVGVTFIATSDLPDTGLNKSFVRTMNSPGAISGYTFYPHVGQVFIE
                     GPFDGSVATSTQSRAKIFECYPAESSEETQCAAAIISTLAGKAFRRPATEADVTEIMA
                     FFEAGREEGGSFDYGIEAVVQRILADPEFIYRREVEPAGVAPGSPYEITDLELASRLA
                     FFLWSSIPDDELIQLASQNRLRDDDVLEQQVGRMITDPRANAFVENFTGQWLNVRGMQ
                     ASEPVVELFPDFDSTLRAAFRREVELFFGSVIQEDRSILDLLTADYTFVNERLAKHYG
                     IADVYGPQFRRVKLTPELDMRRGLLGKGALLTITSDAARTSPVKRGKWFLETFLDISP
                     PDPPPGVETDLKLEPGAAPKTLRARLEAHRINPSCSACHQTFEPMGLAMENFDAVGAW
                     RTMDAGQPIDPSGVTNDGTRLTDLASLREFTVANGDVFAQSVTEKLLTYAIGRGLEYQ
                     DMPLVRSIAREAAENDYRFSALLMGVIRSSAFTMNVKSADSEG"
BASE COUNT          618 a         1102 c         1157 g          525 t
ORIGIN      
        1 gcaccgagtg agcggatgcc tggcagggcg agagggttac ccgatcgcct ggccgaagcg
       61 ctcatgcgcg gcgcgcccgc gagtcgagtg ttgcggtagc attctcaatc caccatgacg
      121 gacgacacgc tgaacaacag ggtcgcgctc gtcaccggcg gcgggcgcgg aatcggcaag
      181 ggcatcgcga tcgcgctcgc ggtggccggc tgcgacgtcg ccgtgaacta cgtgagccgc
      241 gaggccgacg cccttcagac cgccgacgcg atccgagcgc tcggcaggcg cgcgctcgtc
      301 gtgcacggcg acgtgtcgaa gagcgccgac gtcacggcga tggtcactgc agtcgaagcg
      361 gggcttggcc ccgtggacat cctcgtgaac aacgccggtc gcgcgacgtt cgagggcctc
      421 gaacaaatga cggaggcgag ctggaacgag acgcttcagg tcaacctcac ctccgtgttc
      481 ctgatgacgc aggccgtgct gccgcggatg cgcgagcaca agtgggggcg cgtgatcaac
      541 ctcacgtcgg tggccgcgca ggccggcagc gtgatggcgg tccattactc ggcggcgaag
      601 gccggcgtga tcgcggcgac caagagctat gcgcggctat tggcgaagga aggtgtgacc
      661 gtcaacgcga tagcgccggc cctgatcggc accgagatgg tggccggcaa tccgaacatt
      721 aagcccgaca tgatcccggt cggccggttc ggccgcgtcg aagagtgcgc cgacgtggcg
      781 gtgctgctgg cccgcaacgg gtacatcacg ggacagacca tctccgtgaa cggcggcatg
      841 tacttcgccg cgtagccgaa atctgcggaa ctgcgaagat acgtcaagcg ggccgccgat
      901 cctggggccg aaaacacctg gtttggatac aatttcgccc aaatggaggg cgcgtgagga
      961 ctgaggcact cggagctgtc gcgctggccg gcgcgctcgt gtccggctgc gggctcgtcg
     1021 gcaacgacgg ggagcggcag gcggccgtcg tccggggcaa ctgcttggac tgccacaacg
     1081 cggccgagca ggtcgcggac ctgaatctcg aggcgctgtc gttcgacgat gtcggtgcgc
     1141 atgccgagac ctgggaaaaa gtcattcgca agctgcgggc ggggctcatg ccgcccgcgg
     1201 acggcggtcc gacgctcgat cgcgagacgc gcgaggagct cgtggtcttt ctcgagaacg
     1261 agatcgacga gaacgccgcg ccgcacctgc cggccccggg cctgcatcgg ctgaaccgca
     1321 ccgaatacac gaacgcgatc cgcgaccttc tggcactcga cgtcgatgcc acgaagtttc
     1381 tgccgcccga cgactcgagc cacgggttcg acaacatggc cgggacgctg accacgtcgc
     1441 cggccctgat ggaggcgtac ctgtccgcgg ccggcaagat cagccgcttg gccgtcggca
     1501 ccgagaccgc gcccacgctc gcggtgttcg acgcgccgca cgacacctcg cagaacggct
     1561 acatcgaagg gctgccgttc ggcacgcgcg gcggcatgct gatcgagcac gagttcccgg
     1621 ccgacggcaa ctacgtgttc acggtcaagg gcatgaccgg ctacttcacg gccgtgctcg
     1681 gcaacgtgaa aggcgagcag ctcgaggtca cgatcgacgg cgtacgcgcg tatctcttcg
     1741 actgggacaa ggagatcgcc ccgaacgaag gcaacggcgg ccggacaccg gagatcccga
     1801 tcaaggccgg cttccaccga gtcggcgtca cattcatcgc cacgagcgat ctacccgaca
     1861 ccggcttgaa caagtcgttc gtgcgaacga tgaactcgcc gggcgcgatc tcgggctaca
     1921 cgttctaccc gcacgtcggc caggtcttca tcgaagggcc gttcgacggc agcgtcgcga
     1981 cgagcacgca gagccgcgcc aagattttcg agtgctaccc ggcggagagc agcgaagaga
     2041 cgcaatgcgc ggccgcgatc atctccacgc tcgcgggcaa agcgttccgc cggcctgcga
     2101 ccgaggccga cgttacggag atcatggctt tcttcgaggc cggtcgcgaa gagggcggca
     2161 gcttcgacta cggcatcgag gccgtcgtgc agcggattct cgcggacccc gagttcatct
     2221 atcggcgcga ggtggagccc gcgggcgtcg cccccggatc gccatacgag atcaccgatc
     2281 tcgagctcgc gtcgcgcctc gcgttcttcc tctggagcag catcccggac gacgagctga
     2341 ttcagctcgc gtcgcagaac cgcctccgcg acgacgacgt gctcgagcag caagtcgggc
     2401 gcatgatcac cgacccgcgc gcgaatgcgt tcgtcgagaa tttcacgggg caatggctga
     2461 atgtccgcgg catgcaggcc agcgagcccg tcgtcgagct gttcccggac ttcgacagca
     2521 cgcttcgcgc ggctttccgg cgcgaggtcg agctgttctt cggcagcgtg atccaggaag
     2581 accgcagcat cctcgatctc ttgacagccg attacacgtt cgtgaacgag cggctcgcga
     2641 agcattacgg aatcgccgac gtgtacggcc cgcagttccg ccgcgtaaag ctcacgcccg
     2701 agctcgacat gcggcgcggg ctgctcggta agggcgcgct cctgacgatc acgtcggacg
     2761 ctgcgcgcac gtcgccggtc aagcgcggca aatggttcct cgagacgttc ctcgacatca
     2821 gtccgcccga cccgccgccc ggcgtcgaaa cggacctgaa gctggagccc ggcgcggcgc
     2881 cgaagacgtt gcgcgcgcgg ctcgaggcgc accgcatcaa tcccagctgt tccgcgtgcc
     2941 atcagacgtt cgagccgatg gggctcgcga tggagaactt cgatgccgtc ggcgcgtggc
     3001 ggacgatgga tgccgggcaa ccgatcgatc cgagcggcgt cacgaacgac ggcacgcggt
     3061 tgacggacct cgcgagcttg cgcgaattca cggtcgcgaa cggcgacgtg ttcgcacaat
     3121 ccgtgacgga aaaattgctg acctatgcga tcggccgcgg gttggagtat caagacatgc
     3181 cgctggtgcg gtcgatagcg cgcgaagcgg ccgaaaacga ctatcgattc tcggcgttat
     3241 tgatgggcgt gattcgaagc tccgcgttca cgatgaacgt gaagagcgcg gacagtgagg
     3301 ggtagagcca tgttcatcac gaagaagcac ctttcgcggc gcacgttgct ccgaggcgcc
     3361 ggtgtggcgc tcggcctgcc gctgctcgag tcgatgttcc cg
//
LOCUS       DATCUD010000122         2892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15573, whole genome shotgun sequence.
ACCESSION   DATCUD010000122 DATCUD010000000
VERSION     DATCUD010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2892
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15573"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..550
                     /locus_tag="VIQ99_01760"
     CDS             <1..550
                     /locus_tag="VIQ99_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEY9181893.1"
                     /translation="TLAGRRGSLSVDDEGTPTRCNTLIERGILKGYMLDKMNARLMGM
                     SSTGNGRRESFAHVPMPRMTNTYMLPGKYDPEEIIASIDKGIYAPNFGGGQVDITSGK
                     FVFSASEAYLVENGKKTVPIKGAMLIGSGPEVLTRVSMIGNDLKLDPGLGVCGKDGQS
                     VPVGVGQPTIRIDSLTVGGTQA"
     gene            640..819
                     /locus_tag="VIQ99_01765"
     CDS             640..819
                     /locus_tag="VIQ99_01765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181894.1"
                     /translation="MAIQFDSTMTEAEFPRPLLEPAEERLAREVRGDSDLAVEGLTDS
                     LLSKLFRLVAGRSAD"
     gene            837..1025
                     /locus_tag="VIQ99_01770"
     CDS             837..1025
                     /locus_tag="VIQ99_01770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181895.1"
                     /translation="MWLSKPVYEALPYYYIALGLLALLARLYVTYWYWPLICTIVGIG
                     SLAAGAFVWIKRRDHRSR"
     gene            complement(1036..2337)
                     /locus_tag="VIQ99_01775"
     CDS             complement(1036..2337)
                     /locus_tag="VIQ99_01775"
                     /inference="COORDINATES: protein motif:HMM:NF024793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9181896.1"
                     /translation="MYCELFQLTEPPFRLTPDPQFLFASKQHARAKAYMESTIWLSDG
                     FVVLTGEIGSGKTTLIESFLTELPKDIVLAHISQTQLTPVEFLQALLVEFGFKPFRKR
                     KVELLAMLKDFMVEQYAAGKKILLVIDEAQNLSRKVLEEVRLLSGLEAQKEKLLRIVL
                     AGQPELSVKLDSPRLQQLMQRVRLRFHLGALSKRETHEYITHRLNIAGAKGRTIFDAA
                     ACDVVFRYTGGVPRLINVLCDTAMLCAFAEERTTVNDALVKAAVEELQWVEFSERVRE
                     QERHLESTGRFADAAGHVGRLEILHQDKLVAEFRLPKGRAIIGRTPDNDVQIQSRFVS
                     RHHAQVVSDQTQSVVEDLNSTNGVFIRSQRVKQHVLADGDIIQIGEHKLLYRDMRGAT
                     RHLASTDDDEDDDDELDGEDSLDDDELDEDELDEAVNEDRR"
     gene            complement(2405..>2892)
                     /locus_tag="VIQ99_01780"
     CDS             complement(2405..>2892)
                     /locus_tag="VIQ99_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013157756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY9181897.1"
                     /translation="HRDGILAHTIAPYVDATLQAQAERWLAAIMSKLGYRGVLAVEFF
                     HTGHGLVANEMAPRVHNSGHWTIEGAETSQFENHLRAVLGWPLGSTQARGHAAMLNLL
                     GRLPPREAVLTIPGAHLHDYGKSARPKRKVGHCTLVDTDRARLLERLEPLAALVSRSN
                     Q"
BASE COUNT          499 a          914 c          932 g          547 t
ORIGIN      
        1 cacgctcgcg ggccgacgtg gctcgttgtc cgtcgacgac gaggggacgc cgacgcgctg
       61 caacacgctg atcgagcgcg gtattttgaa gggttacatg ctcgacaaga tgaacgcgcg
      121 gctgatgggc atgagctcga ccggcaacgg ccgccgcgag tcgtttgcgc acgtgccgat
      181 gccgcgcatg acgaacacgt acatgctgcc cggcaagtac gatcccgaag agatcatcgc
      241 gtccatcgac aagggtatct acgcgccgaa tttcggcggc ggccaggtcg acatcacgtc
      301 cggaaaattc gtgttctccg cgagcgaggc gtatctcgtc gagaacggca agaagacggt
      361 gccgatcaag ggcgcgatgc tgatcggcag cggaccggaa gtgctgacgc gcgtatcgat
      421 gatcggcaac gacctgaagc tcgacccggg gctcggcgtc tgcggcaagg acggtcaatc
      481 ggtgccggtc ggcgtcggcc aaccgacgat tcggatcgat tcgttgacgg tcggcggcac
      541 gcaggcctga tttaagtcaa accgtcctcg tgaatggctt cactgcaatc cctgcggtgt
      601 tgctctaggc tactcgcagc atcaacaccg cgagttgcca tggcgattca attcgattcg
      661 acgatgaccg aggcggagtt cccgcggccg ctgctggagc cggccgagga gcggctcgcg
      721 cgcgaggtcc gcggcgattc cgatctcgcc gtcgaaggcc tgaccgactc gctcctgagc
      781 aagctttttc gactggtcgc gggccggagc gcggattagc gctagactgg acagccatgt
      841 ggttgtctaa acccgtctac gaggcgctgc cgtactacta catcgcgctc ggcctgctcg
      901 cgctgctggc gcgtctctac gtcacctatt ggtattggcc gctgatctgc acgatcgtcg
      961 gcatcggcag cctcgccgcg ggcgccttcg tttggatcaa gcgccgcgac catcggtcgc
     1021 gctgatacag gtgccctagc gccggtcctc gttcacggct tcatcgagct cgtcttcgtc
     1081 gagctcgtca tcgtcgagtg aatcctcgcc gtcgagctcg tcgtcatcgt cctcgtcgtc
     1141 atcggtcgac gcgagatggc gcgtggcgcc gcgcatgtcc cggtacaaca gcttgtgctc
     1201 gccgatctga atgatgtcgc catcggccag cacgtgttgc ttcacgcgtt gcgagcgaat
     1261 gaacacgccg ttcgtgctgt tcaagtcctc gaccactgac tgcgtttggt ccgacacgac
     1321 ctgcgcgtgg tggcgcgaga cgaaccggct ctgaatctgc acgtcgttgt ccggcgtgcg
     1381 accgatgatt gcgcggccct tgggaagacg gaactccgcg acgagcttgt cctggtgcag
     1441 gatctcgagg cgcccgacgt gccccgcggc atccgcgaag cggcccgtgc tctccaggtg
     1501 gcgctcttgc tcgcgcacgc gctccgagaa ctcgacccac tgtaattcct cgaccgcggc
     1561 cttgacgagc gcgtcgttga cggtcgtgcg ttcctcggcg aacgcgcaca gcatcgccgt
     1621 gtcgcagagc acgttgatca atcgcggcac gccgcccgtg taccggaaca cgacgtcgca
     1681 ggcggccgcg tcgaaaatcg tgcggccctt ggccccggcg atgttgaggc gatgtgtgat
     1741 gtactcgtgc gtttcccgct tcgacagagc gcccaagtgg aagcggagcc gcacgcgttg
     1801 catcaactgc tgcaaacgcg gcgaatcgag cttgaccgac aactcgggct gcccggcgag
     1861 gacgatcctg agcagctttt ccttctgcgc ttcgagaccg gagagcaggc gcacctcttc
     1921 gagcaccttg cgcgacaggt tctgcgcctc gtcgatcacg agcaagatct ttttgccggc
     1981 cgcgtactgc tcgaccatga agtccttcag catcgcgagc agctcgacct tgcgcttgcg
     2041 aaacggcttg aagccgaact cgaccaacag cgcttggagg aactcgacgg gcgtgagctg
     2101 cgtttggctg atgtgcgcga gcacgatgtc tttcggaagc tccgtcaaga agctctcgat
     2161 cagcgtcgtc ttgccggagc cgatctcgcc cgtgaggacg acaaagccgt ccgagagcca
     2221 aatcgtcgac tccatgtagg ccttcgcgcg cgcgtgctgt ttgctggcaa acagaaactg
     2281 cggatcgggc gtgagccgaa agggcggttc ggtcagttgg aaaagctcgc agtacatcca
     2341 aggagccggg tgtattggaa ggccgaagcc taccccaaag actgcggtgt ttcgaggtat
     2401 ggaatcactg attcgagcgc gagaccaggg ccgcaagcgg ttccaggcgc tcgagcaggc
     2461 gggcccgatc ggtgtccacg agcgtgcagt gcccgacctt ccgcttcggt cgtgcgctct
     2521 tcccatagtc gtggaggtga gcgcccggaa tggtcagcac cgcttcgcgc gggggcagcc
     2581 ggccgagcag attcagcatc gcggcgtgtc cgcgcgcctg cgtgctcccg agcggccagc
     2641 ctaagaccgc gcgcagatgg ttctcgaatt ggctcgtctc cgcgccttcg atggtccaat
     2701 gccccgagtt gtgaacgcgc ggcgccatct cgttcgcgac gagcccatgt cccgtgtgaa
     2761 agaactccac ggcgaggacg ccgcgatagc cgagcttgct catgatcgcc gcaagccatc
     2821 gttcggcttg cgcctgcagc gtcgcgtcga cgtacggcgc gatcgtgtgc gcgagaatgc
     2881 cgtcgcgatg ga
//
LOCUS       DATCUD010000123         3097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1382, whole genome shotgun sequence.
ACCESSION   DATCUD010000123 DATCUD010000000
VERSION     DATCUD010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1382"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..502)
                     /locus_tag="VIQ99_01785"
     CDS             complement(<1..502)
                     /locus_tag="VIQ99_01785"
                     /inference="COORDINATES: protein motif:HMM:TIGR04211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04211 family SH3 domain-containing protein"
                     /protein_id="HEY9181898.1"
                     /translation="MLERALLAFAFAGCATAAAETAYVTDSLRLGIHAAADTSDQAFD
                     NLISGTAVEVLERNGNYARVRLEDGREGWVRTMFLVTTKPAAARIAELEAQVGQLESA
                     VTAAKEAEVAAEQELARLTNTTGAAEAIQDTVKRLQTENRAYQERFESYRHTLPLTWV
                     IPAAIVA"
     gene            complement(560..2719)
                     /locus_tag="VIQ99_01790"
     CDS             complement(560..2719)
                     /locus_tag="VIQ99_01790"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY9181899.1"
                     /translation="MPVDDTDSLSPGAYAPYAQLVKMLMPSAGSVAIYDCDAELVWCS
                     DGYERPDLRVLLEQQRVSETVASRGRVDNTREGVAVFISALRAADARPLGSVVIELGS
                     GTRSTPSMVVSMLRPVLDCLERQLDLERSTLVADRSAGFDLLLGVDEQDRQDASALEE
                     LLRHCVRQLGCVTGALLVPDKNTEISCTIDDTIERSQLLDRTQKHLLAWVQLNNRPMV
                     VNRGAAGADAPYKILSCPLRDPQRRVIGLIALFRSNDAEDFEERDVRILEFVGRKAVS
                     ILESDHDSLTGLTNRLIFERRAQKILDQAGGHDDGAALLYIDIDRIAAINETFGLSAG
                     DEVIQRVGELARMAAGASGLVSRIVGDRFAILLPRETLSTASDVAARILTAASQLGYI
                     HGSETLPVSVSIGVVVGKSGERLPHVLAAAELACKRAKREGAGRMVAVEDASELAPAP
                     TRQLIAASDLQEALRSNRFQLDAQPIVGLRARTDQTVGYELLVRLRGPAGEILAPDKF
                     LDACAHYGLLPALDRWALCSAIEALRPHAQVLANSSSFFTLNVSAQSLENRKYAAFAL
                     ESLAAAGLSPALVCFELKEAAAVANLSAAEAFIRDVTAARAKVALDDFGAGLSSLAYL
                     KRLPVSYLKIDGRFVRRMTNDRIAESIVSGIARAARTLGVLTVAEHVESAAVADRLRE
                     LEVTLGQGFHLGRPAPLAEVVPQAIPAATVARLTTRA"
     gene            complement(2829..>3097)
                     /locus_tag="VIQ99_01795"
     CDS             complement(2829..>3097)
                     /locus_tag="VIQ99_01795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181900.1"
                     /translation="GEVADVDLPAGLRREFGDLQSALSRIAPVGTETRVRASVQKMSP
                     EEAHQHAATIVRLYVDLLNGTERAEPLRVVAAPRKPPRYLASRP"
BASE COUNT          509 a         1050 c         1021 g          517 t
ORIGIN      
        1 acgcgacgat cgccgcgggg atcacccagg tcagcggcag cgtgtggcgg tagctttcga
       61 agcgctcttg gtaggcgcgg ttctccgttt gcagccgctt caccgtgtcc tggatcgctt
      121 ccgcggctcc cgtcgtgttc gtgagccgag cgagctcctg ctccgctgcg acctccgcct
      181 ctttggccgc cgtgacggcg ctctcgagct ggccgacctg cgcttcgagc tcggcgatcc
      241 gcgccgcggc cggcttcgtc gtgacgagga acatcgttcg aacccagcct tcacggccgt
      301 cctcgagccg aactcgcgcg taattgccgt tgcgctcgag aacctcgacc gcggtgccgc
      361 tgatgaggtt gtcgaacgct tggtcgctgg tatccgccgc cgcgtggatg ccgagccgca
      421 aggagtcggt gacgtacgct gtctccgccg cagcggtcgc gcagccggcg aaggcaaatg
      481 cgagtagcgc gcgctcgagc atgaggatca ccgcgtggct gattctcggt ggattatagg
      541 tcgccccgcg tgagatcggt caggcgcgcg tggtcagccg cgcaacggtc gcagccggga
      601 tggcctgcgg tacgacctcc gccaacggcg cgggccggcc gagatggaac ccctggccga
      661 gagtgacctc gagctcccgc aggcggtccg cgaccgctgc gctctcgacg tgctcggcga
      721 ccgtgagcac acccaacgta cgcgcggctc gcgcgatgcc ggatacgatc gattcggcaa
      781 tccgatcgtt cgtcattcgg cgcacgaagc ggccgtcgat cttgagatag ctcaccggca
      841 gtcgtttcag gtaggcgagc gaactcaagc ccgcgccgaa gtcgtcgagg gcaaccttcg
      901 ccctggccgc cgtcacgtcg cggatgaacg cttccgcggc gctcaaattc gcgacggccg
      961 ccgcctcctt gagctcgaag catacgagcg ccggcgacag gcccgcggcc gcgagcgact
     1021 cgagcgcgaa cgcggcgtac ttgcgattct cgagcgactg cgcagacacg ttcagcgtga
     1081 aaaacgacga cgaattcgcg agcacctgcg catgcgggcg caacgcctcg atcgccgagc
     1141 acagcgccca ccggtccagg gccggcagca gcccgtagtg cgcgcacgca tcgagaaatt
     1201 tgtccggcgc gaggatttca ccggcgggtc cacgcaaacg cacgagcagc tcgtagccga
     1261 cggtctgatc cgtgcgcgcg cggaggccga cgatgggctg tgcgtcgagt tggaatcggt
     1321 tggagcgcaa cgcttcctgc agatcggagg ccgcaatcag ttgtcgcgtc ggcgccggcg
     1381 cgagctcact ggcgtcctcg acggcgacca tgcggcccgc gccttcacgc tttgcgcgct
     1441 tgcatgccag ctcagcggcg gccagcacat gcggcaaccg ttctccggac ttgccgacca
     1501 cgacgccgat gctcaccgac accggcaacg tctcgctgcc gtggatgtag ccgagttggc
     1561 tcgcggccgt gaggattctc gccgccacgt cggacgccgt gctcagcgtc tccctgggca
     1621 gcaagatcgc gaaccgatcg ccgacgatac ggctgacaag cccggatgct ccggcggcca
     1681 tacgcgcaag ctcgccgacg cgttgaatga cctcgtcacc ggccgataag ccgaacgtct
     1741 cgttgatcgc ggcgatcctg tcgatgtcga tgtacaacag cgccgcgccg tcgtcgtggc
     1801 cgccggcttg atcgagaatc ttctgcgccc gccgctcgaa gatcagtcgg ttcgtgagcc
     1861 cggtcagcga atcgtgatcg ctttcgagaa tcgagacggc cttgcgaccc acgaactcga
     1921 ggatgcgcac gtcgcgctcc tcgaagtcct cggcgtcgtt cgaccggaac agcgcgatca
     1981 agccgatcac gcgccgctgt ggatcgcgca aagggcacga cagtatcttg tagggcgcgt
     2041 cggcccctgc tgcgccgcga ttcacgacca tcggtcggtt gttgagctgc acccaggcga
     2101 gcagatgctt ttgcgtgcga tcgagcaact gcgatcgttc gatcgtgtcg tcgatcgtgc
     2161 aggagatttc agtgttcttg tccggcacga gcagagcgcc ggtcacgcaa ccgagttgcc
     2221 gcacgcagtg acgcagcagc tcctcgagag cgcttgcgtc ttggcgatct tgctcgtcga
     2281 cgccgagcag caggtcgaaa ccggcgctgc gatccgcaac cagcgtgctg cgctcgagat
     2341 cgagctggcg ttcgaggcag tcgagcacgg gccgcagcat gctgacgacc atcgacggcg
     2401 tgctccgcgt gccggagccg agctcgatca cgacggaccc gagcggccgc gcgtcagcag
     2461 ctcgcaatgc ggagatgaat acggccacgc cttcgcgcgt gttgtcgacg cgcccgcggc
     2521 tcgcgaccgt ctcgctgact cgttgctgct cgagcagcac gcggagatcg ggccgctcgt
     2581 aaccgtccga gcaccacacg agctcggcat cgcaatcgta gatcgcgacg ctgccggcgc
     2641 tcggcatcag catcttcacg agctgcgcat aaggagcgta ggcacccggg ctcaagctat
     2701 cggtgtcgtc gacgggcact gcggaggcgg ccggctcggg gcggaattac cccacgcgaa
     2761 tcatcccgga aacgcccacg caaatccttg atgggggtcg caaacccctg gcaaaactgg
     2821 gtcctttctt aggggcggct cgcgaggtag cgcgggggct tacggggtgc cgcgacgacc
     2881 cgaagcggct cggcccgctc cgtgccgttc aataggtcga cgtagagccg gacgatcgtc
     2941 gcggcgtgct gatgagcctc ttccggcgac atcttctgca cgctggcgcg gacgcgagtc
     3001 tccgtgccga ccggcgctat tcgcgacagc gcgctctgta agtccccgaa ttccctacgt
     3061 aaaccggccg gaaggtccac gtcggcgacc tcgccca
//
LOCUS       DATCUD010000124         2669 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86528, whole genome shotgun sequence.
ACCESSION   DATCUD010000124 DATCUD010000000
VERSION     DATCUD010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2669)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2669)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2669
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86528"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..2445)
                     /locus_tag="VIQ99_01800"
     CDS             complement(145..2445)
                     /locus_tag="VIQ99_01800"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9181901.1"
                     /translation="MRLSSTRPFLPATLISSIAACFAGPDAVVAQQPESSSAIETIDV
                     VGTTPLGANRNLDQIAANVQTATADDLREQAALDVADFMKRSMGSVFVNDAQNNPLQP
                     DVQYRGFVASPLLGLPQGLAIYQDGVRVNEPFGDTVNWALIPESAISELYLVPGSSPL
                     FGLNSLGGAVALHTKDGLTHAGTSAELVMGSFERLTVQAETGGSIDDDFGYFVTVSHF
                     EEEGWRDYSPSEAEQLFAKLSARGQGSRLDVSLTYVDTDLIGNGAAPVDLLELDRAAI
                     FTRPDQSKNELLMLNVGGEQSVSATIALRGNLYVRSSDVSTLNGDDSDFAECAGAPGF
                     ICEEEDGAEEIVLDENDDPIPFDDELEGATINRTSTEQDGFGFGFQTDFTDDLGGRDN
                     LFTVGIAHDTANVDFGASTELGALDDTRLAVPGGAFVGEAFTGLKSVTDNTGIYLSET
                     VTLGATALTLSGRYNRANVELTDQLDDDLDGDHTFQRFNPAVGVTVGADSLTFYAGYS
                     EANRAPSPVELTCADEDDPCRLPNAFVADPPLEQVVAKTFELGARGPLGNGRWHAGAF
                     STTNEDDIIFISAGALTNQGFFDNVGETRRKGFEVNLAGGSDRISWSVDFTQLDATFG
                     ESFVVASPNNPAAVDGEIEVEAGDRLPLIPERLFKAGLRFAATESLSFGADLLAASEI
                     YHRGDEGNLVATIDGYTVINLRGEYRFGARASALVSVDNVLDEEYATFGVLGEPDEVL
                     GDDFEDPSFLGPGAPRAVWAGVRFSF"
     gene            2489..>2669
                     /locus_tag="VIQ99_01805"
     CDS             2489..>2669
                     /locus_tag="VIQ99_01805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181902.1"
                     /translation="MLLHSGGAPKLGKNSLCRLRGAGRNSDRQAATERPEYRLMGLRV
                     RLNLLISVMFVTILVL"
BASE COUNT          426 a          873 c          907 g          463 t
ORIGIN      
        1 gccgcgcggt cgcgatccga acgtagcgcc ttactacgac gagctctggg cgtatctgct
       61 cgcgcggcgc gacggggccg tgccggccgg gccgctcgag cgtctgcccg agccgggcgc
      121 cggaacgtcc cgcgatccgc agccctagaa cgagaagcgc acgccggccc acacggcgcg
      181 cggcgcgccg gggcccaaaa agctcgggtc ctcgaagtcg tcgccgagaa cctcgtccgg
      241 ctcgccgagc acgccgaacg ttgcgtattc ctcgtcgagc acgttgtcga cgctgacgag
      301 cgcgctcgcg cgagcgccga agcggtactc gccgcggaga ttgatcacgg tgtagccgtc
      361 gatcgttgcg acgagattac cctcgtcgcc gcggtggtag atctcggagg cggcgaggag
      421 atcggcgccg aacgacagcg attccgtggc ggcgaagcgt aatccggcct tgaacaatcg
      481 ctccgggatc agcggcagcc ggtcaccggc ttcgacctcg atctcgccgt cgacggcggc
      541 cggattgttc gggctcgcga ccacgaacga ttcgccgaac gtcgcgtcga gctgcgtgaa
      601 gtcgaccgac caggagatcc ggtcgctgcc tccggcgaga ttcacctcga agcccttgcg
      661 ccgtgtctcg ccgacgttgt cgaaaaagcc ctgattcgtg agcgcacccg cgctgatgaa
      721 gatgatgtcg tcctcgttcg tcgtgctgaa cgcgccggcg tgccagcgac cattgccgag
      781 cggaccgcga gctccgagct cgaaggtctt cgcgacgacc tgctcgagcg gcgggtcggc
      841 gacgaacgca ttcggcagcc ggcacggatc gtcttcgtcg gcacacgtga gctcgaccgg
      901 cgacggagcc cgattcgcct cgctgtagcc ggcatagaac gtcagtgaat cggcgccgac
      961 cgtcacgccg acggcgggat tgaagcgctg gaacgtgtgg tcgccgtcga ggtcgtcgtc
     1021 gagctgatcc gtgagctcga cgttcgcgcg gttgtagcgg cccgacagag tcagcgcggt
     1081 cgcgccgagc gtgacggttt cactcaggta gatgccggtg ttgtcggtca cggacttgag
     1141 tcccgtgaac gcctcgccga cgaatgcgcc gcccggcacg gccagccgcg tgtcatccag
     1201 cgcgccgagc tccgtgcttg cgccgaagtc gacgtttgcg gtgtcgtgcg cgatcccgac
     1261 cgtgaacaag ttgtcgcggc cgccgaggtc gtccgtgaag tcggtctgaa agccgaagcc
     1321 gaagccgtct tgctccgtgc tcgtgcggtt gatcgtggcg ccttcgagct cgtcgtcgaa
     1381 cggaatcgga tcgtcgttct cgtcgagcac gatttcttcg gcgccgtcct cctcctcgca
     1441 gatgaacccc ggcgcgcccg cgcattccgc gaagtcggag tcgtcgccgt tcagcgtgct
     1501 cacgtcgctg gagcgaacgt acagattgcc gcgcagcgcg atcgtcgcag acacggattg
     1561 ctcgcccccg acattcagca tcagcagctc gttcttcgat tggtccggcc gcgtgaagat
     1621 cgcggcgcgg tcgagctcga gcagatcgac gggcgcggcg ccgttgccga tgagatcggt
     1681 gtcgacatag gtcaagctca cgtcgagacg cgagccctgt ccccgggcgc tgagcttcgc
     1741 gaacaactgc tcggcttcgc tcggcgaata atcgcgccag ccttcctcct cgaaatgcga
     1801 gaccgtgacg aagtagccga agtcgtcgtc gatggatccg ccggtctcgg cctgcacggt
     1861 caggcgctcg aacgagccca tgacgagctc ggcgctcgtg ccggcatgcg tgagcccgtc
     1921 cttcgtgtgc agtgcgacgg cgccgccgag cgagttcagt ccgaacagcg ggctcgagcc
     1981 cggcacgagg tagagctcgc tgatcgcgga ctcggggatc agcgcccagt tcacggtatc
     2041 gccgaacggc tcattcacgc ggacaccgtc ttggtagatc gcgaggcctt gcggcagccc
     2101 gagcagcggc gacgccacga atccgcggta ttgcacgtcc ggctggagtg ggttgttctg
     2161 cgcgtcgttg acgaacacgc tgcccatgct gcgtttcatg aagtcggcga cgtcgagcgc
     2221 cgcttgctcg cgtaaatcgt ccgccgtcgc ggtctgcacg ttggcggcga tctggtcgag
     2281 attgcggttt gcgccgagcg gcgtcgtccc gacgacatcg atggtttcga tcgcgctcga
     2341 ggactcgggt tgctgcgcga cgaccgcgtc cggccccgca aagcaggcgg cgatgctcga
     2401 gatcagcgtc gccgggagga acgggcgcgt gctcgatagc cgcatcttca tttgagcgag
     2461 ggcaacacgg cgccgattct agcgacgcgt gctcctccat agcggcggtg cgccgaaact
     2521 cgggaagaat tccctgtgcc ggctccgagg ggcggggaga aactcagata ggcaagccgc
     2581 gacggagcgg ccagaatacc ggctcatggg cttgcgcgtg cgcctgaatc tcctgatcag
     2641 cgtcatgttc gtgacgattc tcgtgctcg
//
LOCUS       DATCUD010000125         2300 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58047, whole genome shotgun sequence.
ACCESSION   DATCUD010000125 DATCUD010000000
VERSION     DATCUD010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58047"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..917)
                     /gene="cysW"
                     /locus_tag="VIQ99_01810"
     CDS             complement(78..917)
                     /gene="cysW"
                     /locus_tag="VIQ99_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008113433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEY9181903.1"
                     /translation="MRHSTTTARSGNRFIRGVLILLSVVFLSLILVVPVVSVLGYAFS
                     RGFDVYLATLRAEDTLAAIKLTLVTAAIVVPLNTIFGVAAAWAIAKFDFRGKQALITL
                     IDLPFSVSPVIAGLMFVLLFGSQGWFGPWLRDHGFQIVFALPGIVLGTLFVTFPYVAR
                     ELIPIMQLQGREAEEAAVGLGAGGWTTFFRVTLPSIRWGLMYGVILCNARAMGEFGAV
                     AVLSGHIRGLTTTMPLQAQVLYDEYDLVGAFAVASLLMLLALFTLLLKAVVEAFGARR
                     RRA"
     gene            complement(917..1762)
                     /gene="cysT"
                     /locus_tag="VIQ99_01815"
     CDS             complement(917..1762)
                     /gene="cysT"
                     /locus_tag="VIQ99_01815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018746438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEY9181904.1"
                     /translation="MAAAKGWVGPSVLPGFGMTLGFAGIFLAAIVLIPMAALVVHGAS
                     LPPTEFWRIATEPRALASYRLTFGASLAAALINAVFGFIVAWCLVRYEFPGKRLVDAI
                     IDLPFALPTAVSGIALATVFAPQGWIGQWLAPLGIEVAYTWVGVVVALTLIGLPFVVR
                     SVQPALEEVDVTFEEAAEVLGASRMHVFRRVILPTVMPSLATGFTLALARAVGEYGSV
                     IFIAGNLPLRTEITPLLIVIKLEQFDYVGAAVLGVVMLFTSFVMLLTINAINGWRIRR
                     VAGRR"
     gene            complement(1795..>2300)
                     /locus_tag="VIQ99_01820"
     CDS             complement(1795..>2300)
                     /locus_tag="VIQ99_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012248826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0043199 - sulfate binding [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9181905.1"
                     /translation="RARQQAEAFVGELYRHVPVQDTGARAATNTFVQRGIGDVLLAWE
                     SEAKLALRQMGPDAFDVVYPSVSVLAEPPVALIDGVVDRKETRAVAEAYLEFLYSPEG
                     QDIAARNFFRPTDPEVLARYANEFPPLRLFTVDDVFGGWPKAQQEHFSDGGVYDRLFA
                     AAAESSP"
BASE COUNT          451 a          801 c          744 g          304 t
ORIGIN      
        1 gaaggccgga gtccgaagct tcgcgagccg gtcggacagg cccgagggta aatatttcag
       61 caacgtttcc acggtttcta agcgcgccga cgccgcgcgc caaacgcctc gactacggct
      121 ttcaggagca gcgtgaacaa cgcgagcaac atcagcaacg acgccaccgc aaaggcacct
      181 acgagatcat actcgtcgta gagaacttgg gcctgcagcg gcatcgtcgt cgtgagcccg
      241 cggatgtggc ccgacaacac ggccacggcg ccgaattcgc ccatcgcgcg cgcgttgcag
      301 aggatcacgc cgtacatcaa gccccagcgg atgctcggca gcgtcacgcg gaagaacgtg
      361 gtccaaccgc cggcaccgag gcccacggcg gcctcctcgg cctctcgtcc ctgcagctgc
      421 atgatcggga tcagctcgcg cgcgacgtac gggaacgtca cgaacagggt gccgagcacg
      481 atacccggca gcgcgaacac gatctggaag ccgtgatcgc gcagccaggg cccgaaccag
      541 ccctgcgagc cgaacagcag cacgaacatg aggcccgcga tcacgggcga caccgagaac
      601 ggcagatcga tcagcgtgat cagcgcctgc ttgccacgaa aatcgaactt cgcaatggcc
      661 caggcggcgg ctacgccgaa tatcgtgttc agtggcacga cgatcgcggc cgtcaccagc
      721 gtgagcttga tcgccgcgag cgtgtcctcg gcgcgcagcg tcgcgaggta cacgtcgaaa
      781 ccgcgtgaga acgcgtaacc gagcaccgaa acgacgggca cgacgaggat cagcgagagg
      841 aacactaccg acagcaggat cagcacccct cgtatgaagc gattaccgct gcgggccgtg
      901 gtcgtgctgt gccgcatcag cgtcttcccg ccacgcggcg gatgcgccag ccgttgattg
      961 cgttgatcgt cagcagcatc acgaacgacg tgaacagcat cacgacgccg agcacggccg
     1021 cgcccacgta gtcgaactgc tcgagcttga tcacgatcag gagcggcgtt atctcggtcc
     1081 tgagcggcag gttgcctgcg atgaagatca ccgagccgta ctcgccgacc gcgcgcgcga
     1141 gcgcgagcgt gaatccggtc gccagcgacg gcatcaccgt cggcagaatc acgcggcgga
     1201 acacgtgcat gcggctcgct ccgagcacct cggccgcctc ctcgaacgtc acgtcgacct
     1261 cctcgagcgc cggctgcacg gagcgcacga cgaacggcag cccgatcagc gtgagcgcga
     1321 cgacgacgcc gacccacgtg tacgccacct cgatgccgag cggcgcgagc cattggccga
     1381 tccagccttg cggcgcgaac accgtggcga gcgctatccc cgagaccgca gtcggcagcg
     1441 cgaacggcag atcgatgatc gcgtcgacga ggcgcttgcc gggaaactcg tagcgcacga
     1501 ggcaccacgc gacgatgaag ccgaacacgg cattgatcag cgccgccgcc aacgacgcgc
     1561 cgaacgtgag ccgatacgac gcgagcgcgc gcggctccgt ggcgatccgc cagaactcgg
     1621 tgggcggcag gctcgcgccg tgcaccacga gcgcggccat cgggatcagc acgatcgcgg
     1681 ccaggaagat cccggcgaac ccgagcgtca taccgaagcc cggcaacacg ctcggaccga
     1741 cccacccttt cgcagcggcc atgacctacc ctcgcgacaa agcgccgggc cgcgtcacgg
     1801 cgatgactcc gcggcggccg cgaacaaccg gtcgtagacg ccgccgtcgc tgaaatgctc
     1861 ttgctgcgct ttgggccagc cgccgaagac gtcgtcgacc gtgaacagac gcagcggcgg
     1921 gaactcgttc gcgtagcgcg ccaacacctc cgggtccgtg ggccggaaga agttgcgtgc
     1981 ggcgatgtcc tgcccctccg ggctgtagag gaattcgagg tacgcctcgg ccactgcgcg
     2041 tgtttccttg cggtcgacga cgccgtcgat cagcgcgacg ggcggctcgg cgagcacgct
     2101 gacggacgga tacacgacgt cgaacgcgtc cggacccatc tgccgcagcg ccagcttggc
     2161 ctcgctctcc catgccagca gcacgtcccc gatgccgcgt tgcacgaacg tgttggtcgc
     2221 cgcgcgcgcg ccggtgtcct gtaccggcac gtggcggtac agctcgccga cgaaggcttc
     2281 cgcctgttga cgggcacggg
//
LOCUS       DATCUD010000126         1710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36844, whole genome shotgun sequence.
ACCESSION   DATCUD010000126 DATCUD010000000
VERSION     DATCUD010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36844"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="VIQ99_01825"
     CDS             <1..482
                     /locus_tag="VIQ99_01825"
                     /inference="COORDINATES: protein motif:HMM:NF020080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY9181906.1"
                     /translation="AAASTGVLGRLTACTARVGFPLRALHALRYTAPRAALIGDAAHT
                     VHPLAGQGMNLGLLDAAAVAAVLEDALLAGEDPGDLKVLRRYERQRKGDNLAMLTAFD
                     ALNRLFRLPAAVAPLRALGLRAVDSAHPVKRLLMQHALGLRSGAAGRPRWSRADSQA"
     gene            494..>1710
                     /locus_tag="VIQ99_01830"
     CDS             494..>1710
                     /locus_tag="VIQ99_01830"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9181907.1"
                     /translation="MSQKRALTLGALVGALLLTVPLTAQEQTWNRTLERIASGVVSIQ
                     IDSTRSFDTERNQSSQATGFVVDAEHGLILTNRHVVTPGPVRAQAVFLNQEEVDLVPV
                     YRDPVHDFGFFRYDPKQLQFMRPTQLALVPEAAQIGRDIRVVGNDAGEQLSILAGTIA
                     RLDRQAPNYGRGNYNDFNTFYLQAASGTSGGSSGSPVVDIEGRVVALNAGANSQAASS
                     FFLPLDRVEVALAKIQAGEPVPRGTLQTELVHRPFAELRRLGLERETEARVREANPDQ
                     TGMLVVEQVIPESAASSKLMPGDILVEVDGKLITEFVPLAAVLDDAVGREIAVTVERG
                     GQRIEHRLRVDDLHDITPAEYIEYGDGVFHKLSYQQARHFYRPVSGVYVANPGYVFGK
                     AAIPRGSIVTGIGR"
BASE COUNT          271 a          585 c          577 g          277 t
ORIGIN      
        1 tcgcggccgc gagcacggga gtgcttgggc gtctcacggc atgcacggcg cgagtgggct
       61 tcccgctccg ggcgctgcat gcgctgcgct acaccgcgcc gcgagccgca ctgatcggcg
      121 acgccgcgca caccgtgcat ccgctcgcag ggcagggcat gaatctgggg ctgctcgacg
      181 ccgccgccgt cgcggcagtg ctcgaggatg cgctgctcgc cggcgaggat cccggcgatc
      241 tcaaggtgct gcggcgttac gagcggcaac gcaagggcga caacctcgcg atgctgaccg
      301 cattcgacgc cttgaaccgc ctgttcaggc tgccggccgc ggtcgcgccg ctgcgcgcct
      361 tggggttgcg cgcagtcgat tcggcgcatc ctgtcaaacg tttgctgatg cagcatgcgc
      421 tcggcctccg aagcggcgcg gccggccggc cgcgctggtc acgcgcggac tcgcaagcat
      481 agaatccaag gctatgagcc agaaaagagc cttgaccctc ggggcgttgg tcggcgccct
      541 gctgttgacg gtgccactca cggcgcaaga gcaaacctgg aatcgcacgc tggagcgcat
      601 cgcttcgggc gtcgtgtcga ttcagatcga cagcacgcgc tcgttcgaca cggaacgcaa
      661 tcagtcgagc caggccacgg gcttcgtcgt ggatgcggag cacggcctga tcctcacgaa
      721 ccgccacgtc gtgacgccgg ggcccgtgcg cgcgcaagcc gtgttcctga atcaagaaga
      781 ggtcgacctc gtgccggtct atcgcgaccc cgtgcacgac ttcggctttt tccgctacga
      841 cccgaagcag ctccagttca tgcggcctac gcagctcgcg ctggttcccg aggcggccca
      901 aatcggtcgc gacatccgcg tcgtcggtaa tgacgccggg gaacagctct cgatcctggc
      961 cggcacgatc gcgcggctcg atcgccaggc cccgaattac ggccgcggca actacaacga
     1021 cttcaacacg ttctatttgc aggccgcgtc cggaacgtcg ggcggctcgt cggggtctcc
     1081 ggtcgtcgac atcgaggggc gcgtcgtggc gttgaatgcc ggcgcgaact ctcaggccgc
     1141 atccagcttc tttctgccgc tcgaccgggt cgaggtcgcg ctcgcgaaga tccaggccgg
     1201 ggagcccgtg ccgcgcggca cgctccaaac cgagctcgtg catcggccgt tcgcggaatt
     1261 gcgccggctc ggcttggagc gggaaacgga agcacgtgtc cgcgaggcga atccggacca
     1321 gaccggcatg ctcgtcgtcg agcaggtgat cccggagtcg gccgcgtcga gcaagctcat
     1381 gccgggcgac atcctcgtcg aggtcgacgg caagctgatc acggagttcg tgccgctggc
     1441 cgcggtgctc gatgacgccg tcgggcgcga aatcgccgtc acggtcgagc gcggcgggca
     1501 acgcatcgag catcggctcc gcgtcgacga tctgcacgac atcacgcccg ccgagtacat
     1561 cgagtacggc gacggcgtgt ttcacaagct ctcgtatcag caggcgcggc acttctaccg
     1621 tcccgtctcg ggcgtctatg tcgcgaaccc cgggtacgtg ttcggcaagg ccgcgattcc
     1681 gcgcggcagc atcgtcaccg gcatcggccg
//
LOCUS       DATCUD010000127         1969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_100695, whole genome shotgun sequence.
ACCESSION   DATCUD010000127 DATCUD010000000
VERSION     DATCUD010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100695"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VIQ99_01835"
     CDS             <1..347
                     /locus_tag="VIQ99_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008267209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein"
                     /protein_id="HEY9181908.1"
                     /translation="VPDVPDDATEAEIESAVWQQLKTCYDPEIPINIVELGLVYECKV
                     EPTESGRRVAKVKMTLTAPGCGMGEILTQDVREKIEQIPTVERAEVELVFDPPWNQSM
                     MSEEARLEAGLL"
     gene            358..900
                     /locus_tag="VIQ99_01840"
     CDS             358..900
                     /locus_tag="VIQ99_01840"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY9181909.1"
                     /translation="MSGAVDSSSGKRLLLLRHAKAVPADGTFADIARPLAPRGERDSR
                     HMGERMRRRHERFDLVLASPSVRTRQTAELVATAVGYPRDKIAFDERLYLADPEEIAA
                     VIAAQSPVIRCLLVVGHNPGLSELAHRLSPELAVDDLPTAALVALEVDIGRWADVTES
                     TNRLEYYDFPKNPNAPTTIR"
     gene            complement(887..1309)
                     /locus_tag="VIQ99_01845"
     CDS             complement(887..1309)
                     /locus_tag="VIQ99_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008119850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEY9181910.1"
                     /translation="MSEERDEAADRARIDRWLWCARFFKSRSAAALAVRSGHVRLNGQ
                     RVKPAHVVRIGDALHIEAPRATDRDVTVVGVPVRRGPAPEAATAYVETAESLERRRRA
                     SEERALKVAFAPPTDGRPDKRTRRLLLRARQRGAFNES"
     gene            complement(1313..>1969)
                     /locus_tag="VIQ99_01850"
     CDS             complement(1313..>1969)
                     /locus_tag="VIQ99_01850"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEY9181911.1"
                     /translation="MGSVAASGGYWISMAADEIWASPTTLTGSIGVGATIPTIPRTLD
                     WFGVHVDGVGTTALSGGLELTRPLPDAVKGLIAQSVQRTYDDFIEKVALHRERSIEEI
                     DAAAHGRVWVATDALERGLVDRLGTLGGAVESAASLAGLEADSYSVDYVEQQLTLAER
                     LVLSLTESTLRIVDRVIDMPTWPSSVAIALESTLEPLEFLGRFNDPRGIYAYCFCDTR
                     "
BASE COUNT          343 a          679 c          627 g          320 t
ORIGIN      
        1 aggtcccgga cgtgcccgat gatgccaccg aggccgagat cgaatccgcg gtatggcagc
       61 agctcaaaac ctgctacgac cccgagatcc cgatcaacat cgtcgagctc ggtctggtct
      121 acgagtgcaa ggtggagccc acggagtccg gcagacgcgt cgcgaaagtc aagatgacgc
      181 ttactgcgcc cggatgcggc atgggcgaga tcctgacgca agatgtgcgc gagaagatcg
      241 agcagattcc aacagtcgaa cgtgcagagg tcgagctcgt gttcgatccg ccttggaacc
      301 aatcgatgat gtcggaggag gcccgcctcg aggcaggcct gttgtgacgg cacggcgatg
      361 agcggagcgg tcgactcgtc gagcggtaag cgtctgctgc tgctgcggca cgcgaaggcg
      421 gtgcccgccg acggcacgtt cgcggacatc gctcgcccgc tcgcaccgcg gggtgagcgc
      481 gacagccgac atatgggcga gcgaatgcgc cgccgtcacg aacgcttcga tctggtcctc
      541 gccagccctt ccgtgcgcac gcggcaaacc gccgagctcg tcgcgactgc ggtcggctat
      601 ccgcgcgaca agatcgcgtt cgacgagcgc ctctacctcg ccgacccgga ggaaatcgcg
      661 gctgtcatcg cggcacaaag cccggtgata cgctgcttgc tagtggttgg ccacaacccg
      721 ggcctgagcg agctcgccca tcggctgtcg ccggagctcg ccgtcgacga cctgcccacg
      781 gcggcgctcg tggccctcga ggtcgatatc ggccgctggg cagacgtcac cgagtccacg
      841 aatcgcctcg agtactacga ctttccgaag aacccgaacg ccccgactac gattcgttga
      901 acgcgccgcg ttgtcgagct cgcagcaaca gtcgccgggt gcgtttgtcg ggcctgccgt
      961 ccgtcggggg cgcgaacgca accttgagcg cgcgctcctc gcttgcgcgg cgccgccgct
     1021 cgagcgattc ggcggtttcc acatacgcag tggcggcctc gggcgcgggc ccgcgcctga
     1081 cgggaactcc aaccaccgtg acgtcccggt cggtcgcacg cggcgcctcg atgtgcagag
     1141 catcgccgat cctcacgaca tgggcgggct tcacgcgctg cccgttgagg cgcacgtgcc
     1201 cgcttcgcac cgccagggcg gccgcgctac ggctcttgaa gaaccgcgcg caccacagcc
     1261 agcgatcgat ccgcgcgcga tcggcagcct cgtcgcgctc ctcgctcatg cgctagcgcg
     1321 tgtcgcagaa acaatacgca tagatgccgc gcggatcgtt gaaccggccg aggaattcga
     1381 gcggctcgag cgtcgactcg agcgcgatcg ccacgctcga aggccatgtc ggcatgtcta
     1441 tgacgcgatc cacgattcgt aacgtactct cagtcagcga caacacgagt cgttccgcga
     1501 gcgtcagctg ttgctcgaca tagtcgacgg aatagctgtc ggcttcgagc ccagccaggc
     1561 ttgccgccga ctcgacggca cctcccaacg tgccgagccg atcgacgagc ccgcgttcca
     1621 gcgcgtccgt agcgacccat acccgcccgt gcgcggccgc gtcgatctct tcgattgagc
     1681 gttcgcgatg cagagctacc ttctcgatga agtcgtcgta ggttctttgg accgactgcg
     1741 cgatgagccc tttcacggcg tctgggagcg gccgcgtgag ctccaacccc ccggagagcg
     1801 cagtggttcc taccccatcg acgtgaacgc cgaaccaatc gagcgtgcgc ggaatcgtcg
     1861 gaatcgtcgc accgacgccg atcgacccgg tcaacgtcgt cgggctcgcc cagatctcgt
     1921 cggctgccat ggagatccaa tacccgcccg atgcggctac gctgcccat
//
LOCUS       DATCUD010000128         1878 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_22691, whole genome shotgun sequence.
ACCESSION   DATCUD010000128 DATCUD010000000
VERSION     DATCUD010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1878)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1878)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1878
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22691"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="VIQ99_01855"
     CDS             <1..445
                     /locus_tag="VIQ99_01855"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015887975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY9181912.1"
                     /translation="RVAGAGPDLAALRSRALALGADVEFLGYLTGGELVEAVHAARAT
                     VVPSECYENAPISILESFALGKPVIGARIGGIPELIDERATGWTFESRAIDELAAVLG
                     DVDALPERTLAGMGRSAREIVERRFSEQAYLQRLSEIYRRFSVAV"
     gene            457..1584
                     /locus_tag="VIQ99_01860"
     CDS             457..1584
                     /locus_tag="VIQ99_01860"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY9181913.1"
                     /translation="MVELSQRGDIRLGYRCNARCGFCYYQDKLDTPVELEPTTEQLAN
                     RLRVLRAHGATEVEFTGGEPTIRSDLTDLIRLARSLGFVNVSIITNGLRLAKRAYAEE
                     IVAAGANDVLFSIHGHDASLHDAHTALPGSFARILQAVANVRELGGRVRATTTVTGRN
                     HAHLGEILALLVGLNVACIHLAVFSPVAQANATDERLHVRYSDAAASIKNAIDRHREQ
                     LPPLSVKYIPFCFMRGYESYVMNLYQQSFDPDDWNYYLSNKVRRSDSWVARVAIDVAS
                     AMGGLLAKNYVVPVRHGWSGWKVFGLTRIVELLRKRRPAACRSCAYDIVCDHVWKDYI
                     ARFGDAEIQAVPGRKIVDPAWCYGLARYRTPGAPVAAPKRA"
     gene            1596..>1878
                     /locus_tag="VIQ99_01865"
     CDS             1596..>1878
                     /locus_tag="VIQ99_01865"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9181914.1"
                     /translation="MTTGGVPAAEPANPGAVVVTGASSGIGFACAVRLAALGCKVFAG
                     VRATEDRRLLADLPGVTPIVLDVTSARDIAAAHRTVALALPPSGGLLALV"
BASE COUNT          290 a          609 c          643 g          336 t
ORIGIN      
        1 acgggtggcc ggggcgggcc cggatctcgc ggctctacgc agccgcgcgc tggcgctcgg
       61 cgccgacgtc gagttcttgg gatatttgac cgggggtgag ctcgttgagg ccgtgcacgc
      121 tgcacgcgcg accgtcgtgc cgtcggaatg ctacgagaat gcgccgatca gcattctcga
      181 gtcgtttgcg ctcggcaagc ccgtgatcgg cgcacgtatc ggcggcatcc ccgagctcat
      241 cgacgaacgc gccacgggct ggacgttcga gagtcgggcg atcgacgagc tcgctgccgt
      301 gctcggcgat gtcgacgctc tgcccgaacg aacgctcgcc ggcatggggc ggtcggcgcg
      361 cgagatcgta gagcggcgct tctccgagca ggcatacttg cagcgcctga gtgagatcta
      421 tcgccggttc agtgtcgcgg tctagtggag ggagccgtgg tcgagctgtc gcaacgagga
      481 gatatcaggc tcggctatcg ctgcaatgcc cgctgcggtt tctgctatta ccaggacaag
      541 ctcgacacgc cggtcgagct ggagccgacg accgagcagc tcgcgaaccg gctgcgcgtg
      601 ttgcgcgccc acggcgccac cgaggtcgag ttcacgggcg gcgagccgac gatccgttcc
      661 gatctcaccg acctgattcg gcttgcgcgc tcgctcgggt tcgtcaacgt ctccatcatc
      721 acgaacggtc tgcgactcgc gaagcgcgcc tatgcggaag agatcgtggc ggccggcgcc
      781 aacgacgtct tgttctcgat tcacggtcac gatgcgtcac tgcacgacgc tcacacggcg
      841 ctgcccggta gtttcgcgag aattttgcag gccgtcgcca acgtgcgcga gctcggcggc
      901 cgggtccgcg ccacgacgac ggtaacgggc cgcaatcacg ctcacctcgg cgagatactc
      961 gcgctcttgg tcggcctgaa tgtcgcgtgc attcacctcg cggtgttcag tcccgtggcg
     1021 caagcgaacg cgaccgacga gcgcttgcac gtccgctatt ccgacgccgc cgcgtcgatc
     1081 aagaacgcga tcgatcgaca ccgggagcag ctgccgccgc tcagcgtcaa gtacattccg
     1141 ttttgtttca tgcgcggcta cgagagctac gtgatgaatc tctatcagca gagcttcgac
     1201 cccgatgatt ggaactatta tctgagcaac aaggtgcgcc gctccgatag ctgggtggct
     1261 cgcgtggcga tcgacgttgc ctctgctatg ggcggcctgc tcgccaaaaa ttacgtggtt
     1321 cccgtacgcc acggttggtc cggctggaaa gtgttcgggc tcacgaggat cgtcgagctg
     1381 ctgcgcaaac gccggccggc ggcttgccgc agctgcgcgt acgacatcgt ctgcgaccac
     1441 gtttggaagg attacatcgc gcggttcggc gatgccgaga tacaggccgt gccgggacgc
     1501 aagatcgtcg acccggcttg gtgctacggt ctcgctcgct atcggacgcc gggcgcgccc
     1561 gtcgccgcgc cgaagcgcgc ttgaggatcg gccgtgtgac gaccggcgga gtgccagcgg
     1621 cagagccggc gaacccaggt gccgtcgtcg tcaccggagc gtcgtcgggg ataggcttcg
     1681 cgtgcgcggt gcggctcgcg gcgctcgggt gcaaggtgtt cgccggggtt cgagccacgg
     1741 aggaccggcg gctgctcgct gatctgccgg gcgttacgcc gatcgtgctc gacgtcacga
     1801 gcgcgcgcga catcgcagcc gcgcacagga cggtcgccct ggcgttgccg ccctccggcg
     1861 gcctgctcgc gctcgtca
//
LOCUS       DATCUD010000129         2087 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_51066, whole genome shotgun sequence.
ACCESSION   DATCUD010000129 DATCUD010000000
VERSION     DATCUD010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51066"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="VIQ99_01870"
     CDS             <1..366
                     /locus_tag="VIQ99_01870"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9181915.1"
                     /translation="HNLFRNAIEAMEHQNDARVEVSTRRVIGAEADLVEIRVADNGPG
                     FLGEIVHQAFDPYVTSKPKGTGLGLAIVKKLVEEHGGQISARNREQGGAEISILIPIS
                     IDASGQSLNRRHDHRRERA"
     gene            363..1697
                     /locus_tag="VIQ99_01875"
     CDS             363..1697
                     /locus_tag="VIQ99_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY9181916.1"
                     /translation="MSARILVVDDEANIRALIDEILSEEGHEVTTAADAKEARAARKK
                     EDFDLILLDIWMPDTDGISLLREWSEGGAPGTVVMMSGHGTVDTAVEATRLGAVDFIE
                     KPVSLAKLLRTVERALALRRTKEQRRSVAALPTVPAGKSQVIRALREQIARVAQHSAH
                     TLFTGEPGSGRELFARYLASQSHTRGPFVSVMGGDLHDDNAQRELLGDGTEPGAFVRA
                     EGGILFIQELGEIGTTAQRILLSALEQGSFRPTAQAVDRPFNCRVLSSAFPGFERSDT
                     LRPELLSHLSVVVIRVPPLREYPEDVPELLRHHVDVLVDAEGLPFRRFSVAAQNRLRN
                     YPWPHNVRELRNMVKRLLILGGPEEISLAEVEAQLVTDTTDREPLVKQDLLAMPLREA
                     REHFERAYLQQQLLLCGGKVGQLAKRVGMERTHLYRKLRSLGVDFRQSLTDD"
     gene            complement(1702..>2087)
                     /locus_tag="VIQ99_01880"
     CDS             complement(1702..>2087)
                     /locus_tag="VIQ99_01880"
                     /inference="COORDINATES: protein motif:HMM:NF016895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEY9181917.1"
                     /translation="QAREAAPAQTPSSTPNRFDFYEILPQIEVGVPETQSSEAPRERS
                     RPAEKPGSFLLQAGSFAAAADADRLKASLALLGFESHVQRVTIGSTVFNRVRIGPIDD
                     LADAERMQRRLRDAGIDSLLMRVPQ"
BASE COUNT          379 a          638 c          704 g          366 t
ORIGIN      
        1 cacaacctct tccgcaatgc gatcgaggcg atggagcacc agaatgatgc ccgcgtcgaa
       61 gtctcgactc gccgcgtgat cggtgcggag gcagatctcg tcgaaatcag agtagccgac
      121 aacggcccgg gcttcttggg cgagatcgtg catcaagcgt tcgatcccta tgtcacgagt
      181 aagccgaaag gcacgggctt aggtcttgcc atcgtcaaga aactcgtaga agagcacggc
      241 ggccagatca gcgcgcgtaa ccgcgagcag ggcggagccg agatcagtat actcatcccg
      301 atatctatcg acgcgagcgg tcagtcgctc aatcggcgtc acgaccacag gagagaacgc
      361 gcatgagcgc gcgaattttg gttgtcgacg atgaggccaa cattcgagct ttgatcgatg
      421 agatcctgag cgaggaaggc cacgaggtca cgacggcagc cgatgcgaag gaagcgcgtg
      481 ccgcgcgtaa gaaggaagat ttcgacctca ttcttctcga tatctggatg ccggacaccg
      541 acggcatctc cctgttgcga gagtggtccg agggcggcgc gcccggcacc gtggtcatga
      601 tgtcggggca cggcaccgtc gacactgccg tcgaggcgac aaggctcggt gcagtcgatt
      661 tcatcgagaa gcccgtctcg ctcgcgaagc tcctgcgcac ggtggaacgc gcgctcgcgt
      721 tgcgccgcac caaagagcag cgccgtagtg ttgcggcgct cccgacggtt ccggccggca
      781 agagccaggt gatccgagcg ttgcgcgagc agatcgcgcg ggtggcgcag cacagcgcgc
      841 acacgctgtt taccggtgag ccgggcagcg gtcgcgagct gttcgcccgc tacctcgcga
      901 gccagagcca tacgcgcggc ccgttcgttt ccgtgatggg cggcgatctt cacgacgaca
      961 acgcgcaacg cgagctgctc ggcgacggca cggagcccgg cgcgttcgtg cgcgccgaag
     1021 gcggcatctt gttcattcag gagctcggcg agatcgggac gactgcgcaa cgaatcctgc
     1081 tcagcgcgct cgagcaaggg agtttccgtc cgacggcgca ggccgttgat cggccgttca
     1141 attgtcgggt cttgagcagc gcgtttccgg gcttcgagcg cagcgacacg cttcgtcccg
     1201 agctgctttc acacttgagc gtcgtggtga tccgagttcc gccgctgcgc gagtatcccg
     1261 aggatgtgcc cgagctgttg cgacaccacg tcgacgtgct cgtggatgcg gaaggcctgc
     1321 cgtttcgacg gttcagcgtg gcggcgcaga atcgactgcg caactacccg tggccgcaca
     1381 acgtgcgcga gcttcgtaac atggtcaagc gcctgttgat tctcggcggg cccgaggaaa
     1441 tctcgctggc cgaggtcgag gcgcagctcg tgacagacac gacggatcgc gagccgctcg
     1501 tgaagcagga tctgctcgcg atgccattgc gagaggcgcg cgagcatttc gagcgcgcct
     1561 atctgcagca gcagttgctg ctatgcggcg gcaaggtcgg gcagctcgcg aagcgcgtcg
     1621 gcatggagcg cacgcatctc taccgcaagc ttcgctcact cggcgtagac ttccggcagt
     1681 cgctgaccga cgactagacg gttactgcgg aacgcgcatc aacaggctgt cgatgccggc
     1741 atcgcgaagc cggcgctgca tgcgttccgc atccgcgaga tcgtcgatag gtccaattcg
     1801 cacgcgattg aagacggtgc ttccgatcgt tacgcgctgc acgtgcgact cgaatccgag
     1861 cagcgcgagg ctggccttca gccggtcggc atcggccgcg gcggcgaatg agccggcctg
     1921 cagcaggaag ctgccgggct tttctgcggg tcgcgagcgt tcacgcggcg cttcggagct
     1981 ctgcgtttcg gggacgccta cctcgatctg cggcaggatc tcgtagaagt cgaaacgatt
     2041 tggggtcgac gacggcgttt gcgccggggc ggcctctcgg gcctgtg
//
LOCUS       DATCUD010000130         1620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79522, whole genome shotgun sequence.
ACCESSION   DATCUD010000130 DATCUD010000000
VERSION     DATCUD010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79522"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VIQ99_01885"
     CDS             <1..678
                     /locus_tag="VIQ99_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017834679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HEY9181918.1"
                     /translation="RAYATNTLESGWIPSPLPAVYTDERMKKYRKWLPANSYEATGGL
                     AGSFVSSNIEDYYVTPYEIGYGPFVKFDHEFIGREALEKIANKPHRRKVTFAWNSDDV
                     TKVFASMFAGTEEHYKYIDLPLSNYASASFDKIVDSNGKVVGASMFAGYSYNEKSMLS
                     LGIVDPNVQLGDEVTLVWGEPDGGTRKITVERHKQLNIRATVSAVPYSKFVRETYAAG
                     WRTGTEK"
     gene            766..>1620
                     /locus_tag="VIQ99_01890"
     CDS             766..>1620
                     /locus_tag="VIQ99_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006312492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HEY9181919.1"
                     /translation="MAANNLSSVLKAHGNAVKLLRNSKIGMYVYPVVAPEFSNWRSEQ
                     MAWRHSAVLFDQTHHMDELIVEGPDSAAFLEYVGVNSFANFDSNRAKHFVPVTPAGHV
                     IGDMIIFRERDDKFVLVGRAPTANWVRFQQAVGKWKVRLTHDPRSDSRPDGKAIYRTH
                     YRFQIQGPEANKIFDKINGGPVPDVKFFHVDWIKIGSRRVQALRHGMAGAPGLEVWGP
                     YADKHYIQSTILEAARDVGVDLRLVGSRAYSTNTLESGWIPSPLPGIYTGGGMLQEYR
                     DWLGADSYE"
BASE COUNT          319 a          526 c          514 g          261 t
ORIGIN      
        1 cgcgcctacg ccacgaacac gctcgagtcg ggatggatcc cgtcgccgct gccggccgtc
       61 tacaccgacg agcgcatgaa gaagtaccgc aagtggttgc cggccaacag ctacgaggcc
      121 acgggcggtc tcgccggcag cttcgtctcg agcaacatcg aggattatta cgtcacgccg
      181 tatgagatcg gctacgggcc gttcgtgaag ttcgaccacg agttcatcgg tcgcgaggcg
      241 ctcgagaaga tcgcgaacaa gccgcatcgc cgcaaggtca cgttcgcgtg gaacagcgac
      301 gacgtcacga aggtgtttgc gtcgatgttc gcgggcaccg aagaacacta caagtacatc
      361 gacctgccgt tgtcgaacta tgcgtcggca tcgttcgaca agatcgtcga ttcgaacggc
      421 aaggtcgtcg gcgcctcgat gttcgcgggc tacagctaca acgagaagtc gatgctgtcg
      481 ctcggcatcg tggatccgaa cgtgcaactc ggcgacgagg tgacgctcgt gtggggcgag
      541 cccgacggcg gcacgcgcaa gatcacggtc gagcggcaca agcagctcaa catccgcgcg
      601 accgtgagcg ccgtccccta ctccaagttc gtccgcgaga cctacgcggc cggctggcgt
      661 accggaacgg aaaagtagat cgcgcggggc tgaccgcccc gtacgacaaa acccggggcg
      721 agcggtcgcg cgcgacgctc gccccttcct tgcctgggag aaaaaatggc cgcaaacaat
      781 ctgagctccg tgctcaaggc gcacgggaac gccgtgaaac tgctacgcaa ctcgaagatc
      841 gggatgtacg tgtacccggt cgtggcgccc gagttctcga actggcgcag cgagcagatg
      901 gcgtggcggc attcggccgt gttgttcgat cagacgcacc acatggacga gctgatcgtc
      961 gaaggcccgg attccgcggc gtttctcgaa tacgtcggcg tcaacagctt cgcgaacttc
     1021 gactcgaacc gcgccaagca tttcgtgccg gtcacgcctg ccgggcatgt gatcggcgac
     1081 atgatcatct tccgcgagcg cgacgataag ttcgtgctcg tgggccgcgc gccgacggcg
     1141 aattgggtgc gcttccagca agccgtcggc aaatggaaag tgcgcctcac gcacgacccg
     1201 cgttccgaca gccggccgga cggcaaggcg atctaccgca cgcattaccg ctttcagatc
     1261 caagggcccg aggccaacaa gatcttcgac aagatcaacg gcggccccgt ccccgacgtg
     1321 aagttcttcc acgtcgactg gatcaagatc ggctcgcggc gcgtccaagc gctgcgccac
     1381 ggcatggcgg gcgcgccggg tctcgaggtc tggggcccgt acgccgacaa gcactacatc
     1441 cagtccacga tcctcgaggc cgcgcgcgac gtcggcgtcg atctacgcct cgtcggcagc
     1501 cgcgcgtact cgacgaacac gctcgagtcc ggctggatcc cgtcgccgtt gccgggcatc
     1561 tacaccggcg gcggcatgct gcaggagtat cgcgattggc tcggcgccga cagctacgaa
//
LOCUS       DATCUD010000131         2028 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36874, whole genome shotgun sequence.
ACCESSION   DATCUD010000131 DATCUD010000000
VERSION     DATCUD010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36874"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..542
                     /locus_tag="VIQ99_01895"
     CDS             <1..542
                     /locus_tag="VIQ99_01895"
                     /inference="COORDINATES: protein motif:HMM:NF019256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1588 domain-containing protein"
                     /protein_id="HEY9181920.1"
                     /translation="RGAWIQERLLGSPPPTPPANVPQLVENKRGELPRTLRARLEQHR
                     ENPTCFSCHGVMDPLGLALENFSAVGQFRTHDPDTGTPIDASGTLPDGTQVAGAPDLR
                     RALAARPETFVQALTENLLTFALGRETDHRDMPTVREIVRRAKDDDYRFESIVLGIVS
                     SDAFRKREAEDGLRQASLQ"
     gene            574..1857
                     /locus_tag="VIQ99_01900"
     CDS             574..1857
                     /locus_tag="VIQ99_01900"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9181921.1"
                     /translation="MFLTRKHLSRRTVLKGAGASIALPLLDAMIPAGTALAQTAAAPA
                     TRLGFVYFPHGALRNEWEPPTTGRNPKFPFILEPLEPLRDYVTVVSGLRNKSGEGGVP
                     HGVTEETWLTCVTPRSRNATTGVGMSADQIAARYLQKDTTLPSMEICGEPGGMISFRN
                     PTQPLPMEGNPRKVFISMFGQGQTTAERQAILGTTSSLLDYVTQATADLNRKLDAADR
                     AKVASYLDSVREVELRVEKLKQDGESLAGLPDAPIGAPDDFGELLDVQFELFALAWET
                     NRTNVVTMKMVEEASMRTYPNLGVFEAFHPTSHWGGFPERIANLRKIQNYHTGVFAKF
                     AQRLASTPDGDGSLLDHSLILFGSNMANSDAHDADPLPQALIGRGGGVKGNQHVRYKQ
                     DSPHANILVTMLERGGVPAEELEKFADSTGPLSEV"
BASE COUNT          359 a          666 c          689 g          314 t
ORIGIN      
        1 tgcgcggggc gtggatacag gaacgcttgc tcggtagtcc acccccgacc ccgccggcga
       61 acgtcccgca actcgtcgag aacaaacgag gcgagctgcc gcggacgctg cgcgcacgcc
      121 tcgagcagca tcgcgagaac ccgacctgct tttcctgcca cggcgtcatg gatccgctcg
      181 gcctcgcgct cgagaacttc agtgccgtgg gccagttccg gactcacgac ccggacacgg
      241 gaacgccgat cgacgcgagc ggcacgttgc cggacgggac gcaggtcgcc ggcgcgcccg
      301 atttgcgccg cgcgctcgcg gcgcgccccg agactttcgt gcaggcgttg acggaaaatt
      361 tgctgacgtt cgcgctcggc cgtgagacgg accatcgcga catgccgacg gtgcgcgaga
      421 tcgtgcgccg cgccaaagac gacgattacc gattcgagtc gatcgtgctc ggcatcgtgt
      481 cgagcgacgc gttccgcaag cgggaggccg aggacggcct ccgccaggct tctttgcagt
      541 agacttgagc aggccaggac ggagaaacgc atcatgtttc tgacccgaaa gcacttgtct
      601 cggcgtacgg tgttgaaagg cgcgggcgcg tcgatcgcgc tgccgctgtt ggacgccatg
      661 atcccggccg gcacggccct ggcgcagacc gccgcggcgc cggccacgcg cctcggtttc
      721 gtgtatttcc cgcacggcgc gctgcgcaac gaatgggagc cgcctacgac gggtcgtaat
      781 ccgaagttcc cattcatcct ggagccgctc gagccgttgc gcgactacgt gacggtcgtc
      841 agcggcctcc gcaacaagtc cggagagggc ggcgtgccgc acggcgtgac cgaggagacg
      901 tggctcacgt gcgtgacgcc gcgctcgcgc aacgcgacga ccggcgtcgg catgtcggcc
      961 gatcagatcg cggcccggta cttacagaag gatacgacgc tgccgtcgat ggagatctgc
     1021 ggcgagcccg gcggcatgat ctcgttccgc aacccgacgc agccgttgcc gatggagggc
     1081 aacccgcgca aggtattcat ctcgatgttc gggcagggcc agaccaccgc ggagcgccag
     1141 gcgattctcg gcacgacgag cagcctgctc gactacgtga cgcaggcgac ggccgacctg
     1201 aaccgcaagc tcgatgccgc agaccgcgcg aaagtcgcga gctacctcga ctcggtccga
     1261 gaggtcgagc tccgagtcga gaagctgaag caagacggcg aatctctggc gggtctcccg
     1321 gatgcgccga tcggtgcccc cgacgacttc ggcgagctgc tcgacgtcca gttcgagctg
     1381 ttcgcactcg cctgggagac gaaccgcacc aacgtcgtga cgatgaagat ggtcgaagaa
     1441 gccagcatgc ggacttatcc gaacctcggc gtcttcgaag cgtttcatcc gacgtcgcat
     1501 tggggcgggt tcccggagcg gattgcgaat ctccgcaaga ttcagaacta ccacaccggc
     1561 gtgttcgcga agttcgcgca acgtctggcc agcaccccgg acggcgacgg ctcgctgctc
     1621 gaccactcgc tgatcctgtt cggcagcaac atggcgaaca gcgatgcgca cgacgccgat
     1681 ccgttgccgc aggcattgat cgggcgcggc ggcggtgtca agggtaacca gcacgtgagg
     1741 tacaagcagg attcgccgca cgcgaacatc ctcgtcacga tgctcgaacg cggcggagtt
     1801 ccggccgagg agctcgagaa attcgcggac agcacggggc cgctctcgga ggtctgagca
     1861 tgagcggtcg cgcgttgcgc acggtcggcg cgatcgtatt gccggcgctg gtgtttctgg
     1921 ccggttgcgg cgcgcgcgag cagagcatcg acgcgaacct gcgcggcccc gacggcagca
     1981 cgccgttgca gtgggcggtc ttcgaggtcg acgtcgacga ggtcaggc
//
LOCUS       DATCUD010000132         1780 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1436, whole genome shotgun sequence.
ACCESSION   DATCUD010000132 DATCUD010000000
VERSION     DATCUD010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1436"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..274
                     /locus_tag="VIQ99_01905"
     CDS             <1..274
                     /locus_tag="VIQ99_01905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181922.1"
                     /translation="GLDMLYYVANKDTRIVPARGPVLTHADLRKHYEMYSVIWERLVK
                     TLYSGGGPKEALAAKPTQEFDAIMGPSDAFVERAFQSLWAYLSPDA"
     gene            290..>1780
                     /locus_tag="VIQ99_01910"
     CDS             290..>1780
                     /locus_tag="VIQ99_01910"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HEY9181923.1"
                     /translation="MTRNGLHTLVLRTIGVFAVATLFAGCGFIGEPSVAERAAAQWPL
                     VDRYCTDCHNGAELAGGFDLERIGPENIAAHAEKLEMAVRKLRSHAMPPPKEPRPDEE
                     QLVAFVSWLEDALDEAAAATHGYQAIVPHRLNRKEYANAVRDLLALEIDPTEFLPQDE
                     EVKHFDNIASGLQVSPSFIEQYVGAARQIAVRAVGRPDARTGGQTYFAPPGRQKTHVK
                     GLPLGTRGGFVVTHLFPSDGEYEVNVADMFSHIWGNDSEFENTLVVTLDNKIVYETTL
                     GGEEDQRLYDQVQDGAMEKVNARLKDIRFAATAGPHKVGVTFRRRTFAESDDQLQMFV
                     PGGGQDRVFRVASFEISGPYNPTGLSPTPSRDRVFVCHPSRGDDPQICAERILSELAT
                     RAYRRPLTEEDLQELLAYYRDGVATNGFEEGIRSGLTGILASPYFLYRIEMPPPGVAP
                     GETYAIDDVTLASKLSFFLWNTIPDDELRDLAIRGELGDERVLRAQV"
BASE COUNT          322 a          591 c          584 g          283 t
ORIGIN      
        1 cggcctcgac atgctctact acgtcgcgaa caaagacacg cgaatcgtgc cggcgcgggg
       61 tccggtgctc acgcacgcgg acttgcgcaa gcactacgaa atgtacagcg tgatctggga
      121 gcgtctcgtg aaaacgctgt acagcggcgg cggcccgaaa gaggccttgg ccgcgaagcc
      181 cacgcaggag ttcgatgcca taatgggccc gtcggatgcc ttcgtggagc gcgccttcca
      241 gagcctgtgg gcatatctat ctccggatgc ctagtggacg gatcggacga tgacacgtaa
      301 cggattacac acgctcgtgc tgcgaaccat cggcgtgttc gcggtcgcga ccctgttcgc
      361 gggctgcggc ttcatcggtg agccgtcggt cgccgagcgc gcggccgcgc aatggccgct
      421 cgtcgatcgc tattgcacgg attgtcacaa cggcgccgag ctcgcgggag gcttcgacct
      481 cgagcgcatc ggccccgaga acatcgccgc gcacgccgag aagctcgaga tggccgtgcg
      541 caagctccgc agtcacgcga tgccgccgcc gaaagagccg cggccggatg aggagcagct
      601 cgtcgcgttc gtctcctggc tcgaggatgc actcgacgag gcggccgccg cgacgcacgg
      661 gtatcaagcc atcgtcccgc atcgtctgaa ccgcaaggaa tatgcgaacg cggttcgtga
      721 tctgctcgcc ctcgagatcg atcccacgga gttcctgccg caggacgaag aggtcaagca
      781 cttcgacaac atcgcgagcg gcttgcaggt ttcgccgtcg ttcatcgagc aatacgtcgg
      841 agcagctcgg cagatcgcgg ttcgcgccgt cggtcgaccc gatgcgcgca cgggtggcca
      901 gacgtatttc gcgccgccgg gccggcagaa gacgcacgtg aagggcctgc ctctcggcac
      961 gcgcggcggc ttcgtcgtca cgcacctgtt cccgtcggat ggcgaatacg aagtcaacgt
     1021 cgccgacatg ttcagccaca tctggggcaa cgactcggag ttcgagaaca cgctggtcgt
     1081 gacgctcgac aacaagatcg tctacgagac cacgctcggc ggcgaagagg accagcgcct
     1141 gtacgaccag gtgcaagacg gcgcgatgga gaaggtcaac gcgcgcctaa aggatatccg
     1201 cttcgcagcg accgcgggac cgcacaaggt cggtgtcacg ttccggcgcc gcacgttcgc
     1261 cgaatccgac gaccagctgc agatgttcgt gccgggcggc ggccaggacc gcgtgttccg
     1321 ggtggcgtca ttcgagatca gcggtcccta caacccgacc ggcctgagcc caacgccgag
     1381 ccgcgaccgt gtcttcgtgt gccatccgtc gcgcggtgac gacccgcaga tctgcgccga
     1441 gcggatcttg agcgagctcg cgactcgcgc ttatcggcgg ccgctgaccg aagaagacct
     1501 ccaggagctg ctcgcgtatt accgcgacgg cgtggccacg aacggcttcg aggagggcat
     1561 ccgcagcggg ctcaccggca tcctcgcgag cccgtatttc ctgtatcgaa tcgagatgcc
     1621 gccgccgggc gtcgcgcccg gcgagaccta cgccatcgac gacgtcacgc ttgcgtcgaa
     1681 gctgtcgttc ttcctctgga acacgatccc cgacgacgag ctgcgcgacc tcgcgatccg
     1741 cggcgagctc ggcgacgagc gcgtgctgcg agcgcaggtc
//
LOCUS       DATCUD010000133         3386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86581, whole genome shotgun sequence.
ACCESSION   DATCUD010000133 DATCUD010000000
VERSION     DATCUD010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86581"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VIQ99_01915"
     CDS             complement(<1..311)
                     /locus_tag="VIQ99_01915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181924.1"
                     /translation="MSGLGGQDHVCEKSSRQEKGTQEHEEASQIGVGFVQACRQSEAQ
                     STRQAAAEIRDVSQAYERQKALDQAGAHQVSIKTIREEDDRYRTQEAGRRPGAAASTG
                     A"
     gene            complement(364..780)
                     /gene="queF"
                     /locus_tag="VIQ99_01920"
     CDS             complement(364..780)
                     /gene="queF"
                     /locus_tag="VIQ99_01920"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007186556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HEY9181925.1"
                     /translation="MASKPASRPSKESLETFPNPSTETDYTIRMRIPEFTCLCPKTGQ
                     PDFATLDLEYVPDAVCVELKSLKLYVWSFRNEGAFHEAVTNRMLADLVQLLKPRFIRL
                     TADFNVRGGIYTSVVAEYRQPGWNPSPRVVLPGGQE"
     gene            915..>3386
                     /gene="smc"
                     /locus_tag="VIQ99_01925"
     CDS             915..>3386
                     /gene="smc"
                     /locus_tag="VIQ99_01925"
                     /inference="COORDINATES: protein motif:HMM:TIGR02168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEY9181926.1"
                     /translation="MRLSKIKLSGFKSFVDTTTIKFPSNLMGIVGPNGCGKSNIIDAI
                     RWVLGEASAKTLRGDSMVDVIFNGSANRKPVGVASIELTFDNSDGTITGAFAGYNEVA
                     VRRVVSRDGTSQYYLNNTRCRRKDITHILLGTGVGSHGYSIIEQGMISRLVEAKPEEL
                     RAFIEEAAGISKYKERRRETESRIHHTRENLERLKDLREEIDKQLSHLQRQAKDAERY
                     KNLKAEQRKVNAELLSLRLSAHRAEVAGHEHELRQKQTALEAAVAAQRAAETSIEKLR
                     VDLADSNERFSVVQGSYYKVGAEIARLEQSLQHRKDLIQRQSEDLHSTDQQVAEINAH
                     IASDQVEIEELERILQELGPSLEEAHAVQRRSQQNLEQAERAMEQWRERWEQIGEDLA
                     AAERAIHGEDTRLEQLAAQQQRVDKERQRLEEERRTLSSSEIEQRLETLVAHEERLTA
                     ACDNAVRALETVWSQIQQLREQESKVSTLLDQLRESLQTDRGRLTSLEALQEATLGKS
                     SEQVNRWLKSHALDERNRLAQELVVETGWERAVETVLGPYLYAIGIKSLDAVAASLPE
                     VADGGLTLIENGGGAATRGGGDSLLAHLQAPPAVAALLTGVRAATSVQDALSRRHQLA
                     TGESFVTRDGAWIGRQWIRMNRSDDPQVGVIARRDEIKRLLESTHTTARRVDEMAKVL
                     SDTRFQLERLEEARAQAQAEATRRQELSADTKAKLGVTRAELEQARQRATALDRALAD
                     LAAEQQNLITATDESKARRGAAVGRQSDLAATRGEFDQQRRDHQERLAAARGEAEQHR
                     EAVQDIAIKVESRRSSRESASAALVR"
BASE COUNT          688 a         1016 c         1095 g          587 t
ORIGIN      
        1 tgggcgccgg tcgatgcggc ggcaccgggc ctccgcccgg cttcttgggt gcggtagcga
       61 tcgtcttctt ccctgatggt tttgattgaa acttgatggg cgccggcttg gtcgagagct
      121 ttttggcgct cgtacgcttg gctgacgtcc ctgatttccg cggcggcctg gcgtgtgctt
      181 tgggcttcgc tttggcggca cgcttggacg aagccgacgc cgatttggct ggcttcttca
      241 tgctcttggg tgcctttttc ttggcggctg cttttttcgc agacatggtc ttggcctcca
      301 agaccgctca aacggagcgg gcgattatac agaggcatcg aggcagcgga agagggtgga
      361 gcgtcactct tgccccccgg gcaacacgac ccttggggaa gggttccacc cgggctggcg
      421 gtactcggca acgacactcg tgtaaatgcc gccgcgcacg ttgaagtccg ccgtcaagcg
      481 gataaaacgc ggcttcaaca attgaacgag gtcggcaagc atccggttcg tgaccgcttc
      541 gtggaatgcg ccttcgttgc ggaacgacca gacgtaaagt ttcaacgatt tcaattcgac
      601 gcacacggcg tcgggaacgt actcgaggtc caatgtcgcg aaatccggtt gccctgtctt
      661 cggacagaga cacgtgaact ccggaattct catccgaatc gtgtaatcgg tctcggtgct
      721 cgggttggga aaagtctcga ggctttcttt cgacggtcga cttgcgggct tgctcgccac
      781 gtttgcgtgt tccgaatcag cgctgattgc aacgcgcgcg ggcgtcgctt ttggattggt
      841 ttttactcta cactaccgcc gtcgaggcgg ccattgcggc ccggccttgc tcgaccatca
      901 cggggttatc gtaattgcgc ctgagtaaga tcaagctttc gggcttcaag tctttcgttg
      961 atacaaccac catcaagttc ccgagcaact tgatgggcat tgtcggaccg aacggttgcg
     1021 gcaaatccaa catcatcgac gcgattcgct gggtactcgg cgaagcgtct gcgaagacgt
     1081 tgcgcggcga ctccatggtc gacgtgatct tcaacggatc cgccaatcgc aagcccgtag
     1141 gggttgcgag catcgagctg acattcgata actccgacgg gaccatcacc ggtgccttcg
     1201 cgggctataa cgaggttgcc gtgcggcgcg tggtgtcccg cgacggcacg tcgcagtact
     1261 acctcaacaa cacgcgctgt cgtcgcaagg acattacgca catcctgctc ggcaccggcg
     1321 tcggatcgca cggctactcg atcatcgagc aaggcatgat ctcgcgattg gtcgaggcca
     1381 agccggagga attgcgggcg ttcatagaag aggcggccgg catttccaag tacaaggagc
     1441 ggcggcgtga aaccgagagc cgcatccatc acacacgcga gaacctcgag cgcctgaagg
     1501 atctccgcga ggagatcgac aagcaacttt cgcatctaca acgtcaggcg aaggacgcgg
     1561 agcgttacaa gaacctcaag gcagagcagc gcaaggtcaa tgcggagctg ttgtcgttgc
     1621 gcctgagcgc gcaccgcgca gaggtcgctg ggcacgaaca cgagctgcgg caaaagcaga
     1681 cagcactcga ggcggccgtg gctgcgcagc gcgccgcgga aacctcgatt gaaaagttgc
     1741 gcgtcgacct cgcggactcg aacgagcgtt tcagcgtcgt tcagggaagc tactacaagg
     1801 tcggcgccga gatcgcgcgc ctcgagcagt cgctccagca tcgtaaggat ctgatccaaa
     1861 ggcaaagcga ggatctgcac agcaccgatc agcaggtcgc agagatcaat gcgcacatcg
     1921 caagcgatca ggtcgagatc gaagagctcg aacgaatctt gcaagagctg ggccccagcc
     1981 tcgaggaagc gcacgcggtg cagcgccgct cgcagcaaaa tctggagcaa gcagagcgcg
     2041 ccatggagca atggcgcgaa cggtgggaac agatcggcga ggatctcgcc gccgccgagc
     2101 gtgccattca cggtgaggac acgaggctcg agcaactcgc ggctcagcaa cagcgggtcg
     2161 ataaggagcg ccaacgcctc gaggaagaac gacggaccct aagctcctcg gaaatcgagc
     2221 agcgactcga gacgctggtc gcgcatgagg aacgcctcac ggccgcgtgc gacaacgcag
     2281 tgcgcgcgct cgagacggtt tggagccaaa ttcagcagct gcgagagcag gagagcaagg
     2341 tttccacgct gctcgaccag ctccgcgaga gtcttcagac agatcgcggc agacttacgt
     2401 cgctcgaagc gctccaagaa gccacgctcg gtaagtccag cgagcaagtc aatcgctggc
     2461 tcaagtcgca tgcgctcgac gagcgaaatc gactggccca agagctggtc gtcgaaacgg
     2521 gctgggagcg cgctgtcgaa accgttctcg gtccctacct gtacgcgatc ggcatcaaga
     2581 gccttgatgc cgtcgcggcc tcgctgccgg aggtggccga cggtggattg acgttgatcg
     2641 agaacggggg cggggcggca actcgcggtg gcggcgactc tctgttggca cacctgcaag
     2701 ctccgccggc cgtcgccgcg ctgctcacgg gtgtgcgtgc ggcgacgtcg gtccaggacg
     2761 ccctgagccg gcgtcatcaa cttgccacgg gtgagtcgtt cgtcacgcgc gacggcgcgt
     2821 ggatcggtcg ccagtggatt cgaatgaacc gcagcgatga cccgcaggtg ggtgtcatcg
     2881 ctcgtcgcga cgagatcaag cgcctactcg agagcacgca cacgacggcg cgccgcgtgg
     2941 atgaaatggc aaaggtcttg tcggacacgc gatttcagct cgagcgcctc gaggaagcac
     3001 gtgcgcaagc gcaagcagaa gcgacgcgac gccaagagtt atctgccgac acgaaggcca
     3061 agctcggcgt gacccgcgcg gagttggagc aagctcgcca acgcgccacg gcgctcgacc
     3121 gtgcgctcgc ggatctggca gccgagcaac agaacctcat caccgccacc gacgagagca
     3181 aggcgcgccg tggcgcggcc gtaggccggc agagcgatct cgcggcgaca cgcggcgagt
     3241 tcgatcagca gcgccgcgat catcaggaac gccttgccgc ggcacgcgga gaggctgagc
     3301 agcatcgcga agcggttcaa gacatcgcga tcaaagtcga gtcgcggcgc agctcccgcg
     3361 agtccgccag cgcggcgctc gtgcgc
//
LOCUS       DATCUD010000134         3324 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36888, whole genome shotgun sequence.
ACCESSION   DATCUD010000134 DATCUD010000000
VERSION     DATCUD010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3324
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36888"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIQ99_01930"
     CDS             complement(<1..204)
                     /locus_tag="VIQ99_01930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181927.1"
                     /translation="MRNSQRAVVGALGLIVAVMVAFMLWIRLAAEQAPELSGQRASRT
                     YDHTGFDGIEISGQWDVTLERGDA"
     gene            complement(201..572)
                     /locus_tag="VIQ99_01935"
     CDS             complement(201..572)
                     /locus_tag="VIQ99_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006043807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9181928.1"
                     /translation="MEFSQPKGIYQQIADQMRDRILAGEWHEGERIPSVRELAVGVGV
                     NPNTVTKSYQALLDRAIIENQRGLGYFVAGDAKNRILTEMREEFVRDELPRIFRTMRV
                     LGMGLKDLEPYFAQSNGGQAP"
     gene            complement(562..2013)
                     /locus_tag="VIQ99_01940"
     CDS             complement(562..2013)
                     /locus_tag="VIQ99_01940"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9181929.1"
                     /translation="MVNIQALSFGYRRGGALFDGLRLDLASGNIYGLLGVNGAGKSTL
                     LKLMSGLLFAGHGSVRSLGQDPAARRPSFLADVFVLPEDAQAPNISTRDYLRSRAPFY
                     SRFDRAAFDRYLKEFDLPSNGNLATLSHGQQKKFLLAFGLATQAKLVLLDEPMNGLDI
                     PSKSLLRRVITEALVPERLFVISTHQVRDLGTLMDPIVILHRGRVLLNSTLAEIGARV
                     HMTQQSSPPAAGTPDLLFSEPAVGGFWSVWRGGGDGPLDLEVLFNAIVAKPDLVDSVF
                     GAYDRNVGDEFYLVFFSVALFGLGPLVTSQIFVDLHGRATNTALLMLPASALEKTLSR
                     LLLMTVGLVAYLTVLTMVLSWVLEGINAVLFGVSRELYTPLDGAWVLLPHYLVVQSLF
                     FLGAAWFRKLNYIKTIGSLLLIACGLGAVAVGVAWLFGSVIWDDGIRIDNFDTPFDLL
                     TNIAKIAYYFALPAFCWFVAWLRVTETQVSHGI"
     gene            2136..3272
                     /locus_tag="VIQ99_01945"
     CDS             2136..3272
                     /locus_tag="VIQ99_01945"
                     /inference="COORDINATES: protein motif:HMM:NF027219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative zinc-binding metallopeptidase"
                     /protein_id="HEY9181930.1"
                     /translation="MSSSQGFRESNLYAAPIRDLGLKIAGTRLEPVIDEFRAELARCG
                     IAKVVPRFHLSTEWGVPFGTVVIGIPFYLAHPDLTALHGEQVGHIEGFNHADILRYLR
                     HEMGHVINYAYKLYDVEAWVKLFGSITQPYLEEYRPQPFSRRYVRHLPGWYAQKHPDE
                     DWAETFAVWMTPGLDWRADYAQLATALAKLEFCASKMAELAGREPLVTSAELDDDVSG
                     IYYSLEQYYENYVPAAEPGAAGLDGDLRAIFDDLNESEQGSPHETRPAAELIRRHERQ
                     LMATVYRWTGHFPEKTRSLIRDLAKRAETLKQVYPSDVEEEALVGVTTLVTSLAMNFV
                     HRGAYFPETPQQPPAAAPPAAPPPVVSEPAAAEPKTEASSPANP"
BASE COUNT          655 a         1103 c         1022 g          544 t
ORIGIN      
        1 agcgtcaccg cgctcgagcg tgacgtccca ctgaccgctg atctcgatgc cgtcgaaccc
       61 cgtgtggtcg tacgtccgcg aagccctttg tcccgacagc tccggagcct gctccgcggc
      121 gaggcggatc cagagcatga aggccaccat cacggccacg atgagcccca atgccccgac
      181 gacggcgcgt tgactgtttc tcatggcgct tgccccccgt tcgattgcgc gaagtacggc
      241 tcgagatcct tgagtcccat gccgagcacg cgcatcgtgc ggaaaatccg cggcagctcg
      301 tcgcggacga attcttcgcg catctcggtc aggatccggt tcttggcatc gccggccacg
      361 aaataaccga ggccgcgttg gttttcgatg atcgcgcgat ccagcagcgc ctgataactt
      421 ttcgtgacgg tgttcggatt cacgccgact cccactgcga gctcccgtac ggacgggatc
      481 cgctcgcctt cgtgccactc gcccgcaagg attctgtcgc gcatttggtc tgcgatctgt
      541 tggtagatgc ccttcggttg actaaattcc atggctcacc tgtgtctcgg tcacgcgcag
      601 ccacgcgacg aaccaacaaa acgcgggtag cgcgaagtag taagcgatct tggctatgtt
      661 ggtcagcagg tcgaacggcg tgtcgaagtt gtcgattcga atgccgtcgt cccagatgac
      721 ggatccgaac aaccaagcga ctccgaccgc gaccgcgccc aaaccgcagg caatcagcag
      781 caacgagccg atcgtcttga tgtagttcag cttgcggaac cacgcggcgc ccaagaagaa
      841 caggctttgc acgacgagat agtgcggcag gagaacccag gcgccatcga gcggcgtgta
      901 gagctcgcga ctcactccga acaagaccgc attgatgccc tcgagcaccc acgacagcac
      961 catggtcaac acggtcaggt atgcgacgag accgaccgtc atcagcagca agcgcgacaa
     1021 cgttttctcg agcgccgacg ccggcagcat cagcagcgcc gtgttcgtag cacggccgtg
     1081 caggtcgacg aatatctgac tcgtcacgag ggggccgagc ccgaaaagcg cgacggagaa
     1141 gaagacgagg tagaactcgt caccgacgtt tcgatcgtat gcgccgaaca ccgagtcgac
     1201 gagatccggc ttcgcgacga tcgcgttgaa caacacctcg aggtccagcg gcccgtcacc
     1261 gccgccacgc cacacggacc agaatccgcc gaccgccggc tcgctgaaca gcaggtccgg
     1321 agtgccggcc gccggcggcg atgactgttg cgtcatgtgc acgcgcgcgc cgatctccgc
     1381 gagcgtggag ttcaacagca cgcgtccgcg atgcaggatc acgatcgggt ccatcaacgt
     1441 cccgaggtcg cgaacctggt gagtcgagat cacgaacagg cgctcgggca ccagcgcctc
     1501 ggtgatcacg cgccggagca ggctcttcga cggaatgtcg agaccgttca taggctcgtc
     1561 gagcaacacg agcttggcct gcgtcgcgag cccgaacgcg agcaagaact ttttttgctg
     1621 cccgtgcgac agcgtggcca ggttgccgtt gctcggcagg tcgaactcct tcaggtagcg
     1681 atcgaacgcc gcacgatcga agcgcgaata gaacggggcc cgcgagcgca aatagtcgcg
     1741 cgtgctgatg ttcggggcct gtgcgtcctc gggtagcacg aacacgtcgg ccaggaagct
     1801 gggccggcgc gccgcgggat cctggcccag cgaccggacg ctgccgtgac cggcgaacaa
     1861 caaacccgac atcagcttca gcagcgtgga cttgccggct ccgttcacgc ctagcaatcc
     1921 atagatgttg ccggaagcga ggtcgagcct gagcccgtcg aacaacgcgc cgccgcgccg
     1981 gtagccgaat gagagagctt gaatgttgac catgtgtttc tgtgaactag tgtcctattt
     2041 aagtaagaca ctaagacaag atgcaggtcc gcgtcaagcc cccctcccgg gatgtcagaa
     2101 tggcggcacc ccgccttcac cgtttcgaga cgaccatgtc ctcgtcgcag ggctttcgag
     2161 aatcgaacct gtacgccgcg ccgatccgcg accttgggct caagatcgcg ggcacacggc
     2221 tcgagcccgt gatcgacgaa ttccgtgccg agctcgcgcg ctgcggcatc gcgaaggtcg
     2281 tgccgcgctt tcatctctcg accgagtggg gcgtcccgtt cggcaccgtg gtcatcggca
     2341 ttccgttcta cctggcgcac cccgacctca cggcattgca cggcgagcag gtcgggcaca
     2401 tcgaaggctt caatcacgcg gacatcctgc gttacctgcg gcacgagatg ggccacgtga
     2461 tcaactacgc gtacaagctg tacgacgtcg aggcctgggt gaagctgttc ggctcgatca
     2521 cgcagccgta cctcgaggag taccggccgc aaccgttcag ccgccgctac gttcgccact
     2581 tgccgggctg gtatgcacag aagcaccccg acgaggactg ggccgagacg ttcgccgtgt
     2641 ggatgacacc ggggctcgat tggcgcgccg actacgcgca gctcgcgacg gctctcgcga
     2701 agctcgagtt ctgtgcgagc aagatggcgg agctcgccgg ccgcgagccg ctcgtgacct
     2761 cggccgagct cgacgacgac gtcagcggta tctattactc cctcgagcag tactacgaga
     2821 actacgtgcc cgcagccgag cccggcgccg caggtctcga cggcgacttg cgcgcaatct
     2881 tcgacgacct gaacgaatcg gagcagggct caccgcacga gacacgaccc gcggccgagc
     2941 tgattcgccg tcacgagcgg cagctcatgg ccaccgtgta ccgctggacc gggcatttcc
     3001 ccgagaagac gcggagcctg atccgcgacc tggccaagcg cgcggagacg ctgaaacagg
     3061 tatatccaag cgacgtcgag gaggaagcac tggtcggcgt cacgactctg gtcacgtcgc
     3121 tcgcgatgaa tttcgtgcac cgcggcgcct actttcccga gacgccgcaa cagccgcccg
     3181 cggccgcacc gcccgcggcc ccgccgcctg tcgtctcgga gccggccgcg gctgaaccga
     3241 aaaccgaagc gagcagcccc gcgaatccgt agctcagcgc gcgcgctgag cggactacga
     3301 agtccgcatc aaactgaagc agcc
//
LOCUS       DATCUD010000135         2314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65337, whole genome shotgun sequence.
ACCESSION   DATCUD010000135 DATCUD010000000
VERSION     DATCUD010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65337"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1711)
                     /locus_tag="VIQ99_01950"
     CDS             complement(<1..1711)
                     /locus_tag="VIQ99_01950"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9181931.1"
                     /translation="MKATPRDEVQLVNRTVLASTISALLAGGSSAQAQEQQQQQQAPV
                     EEITVTGSRIVRRDLDAASPIVTVDTERLQNSSTISVESVLNQMPQFVPDNTQFDGGT
                     NVASGAVTPGIASVNLRGIGANRTLVLLDGRRAQPVNASLVVDLNTMPPTAAIQRIET
                     ITGGASAVYGADALAGVVNFVLKDDFEGVEMDFHSSATAEGDGQETKFSSVIGVNSEG
                     GRGNVMLAVEWYERDPVLQRDREFYRKGWEDSTNQTGGFLNATGFSPGQVTINTSNIT
                     VNQAVLPLNRPTQQAVNDLFAPYGVTPPAGSNTVEIYFQPDGRPFLLSGFNYTGPIMS
                     YDLNGDGLTGVHRQPNGSLQQVNISALASTPSERRSLFGRATFDMNDNLTAFAQATYA
                     NTEVTTRGGYPPAITVWQAPVPNDGLRPLPPGLQQLLDSRTGSYDPDGAGPQPAIPGA
                     QLPWNVFRGIDFLGGPQEPTTETDGYQLMAGVEGSFRSRDWTWEAYVSTGETDVLIFY
                     DDLPSLQRYQFLVAQPNWGIGSFVRGRNYDVSCGTGLPMFSSVDPDAGCQEAIQSKLR
                     PIQK"
     gene            2074..>2314
                     /locus_tag="VIQ99_01955"
     CDS             2074..>2314
                     /locus_tag="VIQ99_01955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181932.1"
                     /translation="MTTATARAAQHDAAGRHDEAIDELAHATRAGDIEAMTELGKRLV
                     IGDRAPLLPEDGTRFLADAMQAGSSEAALRLATMAA"
BASE COUNT          395 a          725 c          761 g          433 t
ORIGIN      
        1 gcttttggat cggacgcagc ttcgactgaa tggcctcctg gcaaccagca tcgggatcca
       61 ctgaagagaa catcggcagc cccgtgccgc agctcacgtc gtaattgcgg ccgcgaacga
      121 acgagccgat gccccagttc ggttgagcga cgaggaactg gtaacgctgt agcgacggca
      181 gatcgtcgta aaagatcaga acgtccgtct cgccggtcga gacgtacgcc tcccaggtcc
      241 aatcgcgact cctgaatgaa ccctcgacac cggccatgag ctgatagccg tcggtttccg
      301 tggtcggctc ctgtgggccg ccgaggaaat cgatgccgcg gaacacgttc caaggcagct
      361 gtgctcccgg gatcgccggc tgcggcccgg cgccatctgg gtcgtacgag ccggtgcgcg
      421 aatccaggag ctgttgaagg ccgggcggca acgggcgcag gccgtcgttc gggaccggcg
      481 cctgccagac cgtgatggcg ggcgggtagc cgccgcgcgt cgtgacttcg gtatttgcat
      541 acgtggcctg cgcgaacgcc gtcaggttgt cgttcatgtc gaacgtcgcg cgcccgaaca
      601 gcgaccgacg ctcggacggc gtggacgcca acgcggagat gttcacctgt tgcaagctgc
      661 cgttcggttg gcgatgcacg ccggtgaggc cgtcgccgtt caggtcgtag ctcatgatcg
      721 ggccggtgta gttgaatccg gagagtagga acggccggcc gtcgggctgg aagtagatct
      781 ccacagtgtt ggagcccgcg ggcggcgtga cgccataggg cgcgaacaga tcgttgacgg
      841 cttgttgcgt cggccggttc agcggcagga ccgcctgatt caccgtgatg ttgctcgtgt
      901 tgatggtgac ctggcccggc gagaaccccg tcgcgttcaa gaagccaccg gtctggttag
      961 tcgagtcttc ccagcccttg cgatagaact cgcggtcgcg ctgtagcacc ggatcgcgct
     1021 cgtaccactc gacggcgagc atgacgttgc ctctaccgcc ctcgctgttg acgccgatga
     1081 cactcgagaa cttggtctct tggccgtcgc cttcggccgt cgcgctggaa tggaagtcca
     1141 tctcgacgcc ttcgaagtcg tccttcagca cgaagttgac gacgcctgcg agcgcgtcgg
     1201 caccgtacac ggcggacgcg ccgcccgtga tcgtctcgat acgctggatg gcggcggtcg
     1261 gcggcatcgt gttcaggtcg acgacgagcg aggcgttgac cggctgagca cgacgaccgt
     1321 cgagcagaac gagggtgcgg ttcgcgccga taccgcgcag attcacgctc gctatgccgg
     1381 gtgtcacggc gccggacgcc acgttggtgc caccgtcgaa ctgagtgttg tcgggcacga
     1441 actgcggcat ctgattcagc acgctctcga cgctgatcgt gctcgagttc tggagcctct
     1501 ccgtgtcgac cgtcacgatg gggctcgcgg catcgaggtc gcgacgcacg atacgcgagc
     1561 ccgtgaccgt gatctcctcg actggcgctt gctgttgctg ttgctgttct tgtgcttgtg
     1621 ccgagcttcc gccggcgagc agcgccgaga tcgtcgacgc gagcacggta cgattgacga
     1681 gctgcacctc gtcacgtggt gtggctttca tttttctggt cccccccggg ttgttcatcg
     1741 agttaaggca aagcggtggt tcttaacatg agagccggat agctttcggt tgttgtaaaa
     1801 aggtttccat cttgacgccg gcttttgaaa tatagcgttg ttcagcggga ttatggatca
     1861 cactggacca tgccacactg ccacgagttt ctcaaacaac acaccgagca gctacggcct
     1921 tcgcgaacga accgccccgt tcagttcggg tctaccgaat gagccgggcg ggcccgaatc
     1981 ggcgcactcg gcccggcaac cgcgtgcggc aatcgacaag ccgcccgaga cgggtgtaga
     2041 tatctcgctg ccggtttcgc ctggagacgc cccatgacaa cggccacagc gcgcgcggct
     2101 cagcacgacg ccgcaggccg ccacgatgaa gccatcgatg agctcgccca tgcgacgcgc
     2161 gcgggtgaca tcgaggccat gaccgagctc ggcaagcgcc ttgtcatcgg tgaccgcgcg
     2221 ccgctgctgc ccgaggacgg gacacgtttc ctggccgacg cgatgcaggc cggcagctcc
     2281 gaggcagcgc tgcggctcgc cacgatggcg gctc
//
LOCUS       DATCUD010000136         1566 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_72417, whole genome shotgun sequence.
ACCESSION   DATCUD010000136 DATCUD010000000
VERSION     DATCUD010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72417"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..742)
                     /locus_tag="VIQ99_01960"
     CDS             complement(<1..742)
                     /locus_tag="VIQ99_01960"
                     /inference="COORDINATES: protein motif:HMM:NF012706.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9181933.1"
                     /translation="MDRRCLPLALVAASLALAACGGAGDGATTSAAATSQIGGPSGTE
                     LAERQVLHVGNGAELQTLDPHRAEDTASFNVLLDIYEGLISESPKGDLIPGVASTWTV
                     SDDGKTYVFNLRPEARWSNGDPLTAHDFVFSLRRGVDPKTLSVYSYILSPLLNADDIT
                     AGKRPTEDLGVRAIDDHTLEINLANPTPYFLGLLAHSMAYPVHRQSLEANGDQWTRPG
                     NLVGNGAYTLAEWVVQSHLKVVRNPNYWD"
     gene            complement(792..>1566)
                     /locus_tag="VIQ99_01965"
     CDS             complement(792..>1566)
                     /locus_tag="VIQ99_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006914105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9181934.1"
                     /translation="GYEEAAAQGLLAGVNAALRVRSKDPWCPRRDEAYIGVLVDDLVT
                     RGVAEPYRMFTSRAEFRLSLREDNADLRLTPVGRELGVVGDERWVKFESRRDWLAEES
                     ARLNGIVVRPADLAVGGAFAEPLAREVSAYGLLRRPGVGYADVAGLARVGASPALAAL
                     DDESAALWTGSLAIEARYAGYVDRQSAEIARHKRQAATVLPADLDYGQVNGLSNELRE
                     KLARIRPNDIGQAARISGMTPAAISLLLVHVKKRQRRIA"
BASE COUNT          242 a          554 c          514 g          256 t
ORIGIN      
        1 tgtcccagta attcggattg cggacgacct tgaggtgcga ctgcacgacc cactccgcga
       61 gcgtgtacgc gccgttgccg acgaggttgc cgggcctcgt ccactggtcg ccgttcgcct
      121 cgagcgactg gcggtggacg ggataggcca tcgagtgcgc gagaagaccc aagaaatacg
      181 gtgtcggatt cgcgaggttg atctcgagcg tgtgatcgtc gatcgcgcgg acgccgagat
      241 cttcggtcgg ccgcttgccg gccgtgatgt cgtcggcgtt caggagcggc gacaagatgt
      301 agctatagac gctgagcgtc ttcggatcga cgccgcggcg cagcgagaac acgaagtcgt
      361 gagccgtaag cggatcgccg ttcgaccacc gcgcctcggg gcgcagattg aacacgtacg
      421 tcttgccgtc gtcgctgacc gtccacgtcg acgcgacgcc cgggatcaga tcgcccttcg
      481 gcgactcgct gatgagccct tcgtagatgt cgagcagcac gttgaagctc gcggtgtcct
      541 ccgcgcgatg cgggtccagc gtctgcagct cggcgccgtt gccgacgtgc agcacttggc
      601 gctccgcgag ctcggtgccg ctcggaccgc cgatctgcga cgtcgcggct gcgcttgtcg
      661 tggctccgtc gccggcgccc ccgcacgcag cgagcgcgag actcgcagcc accagtgcca
      721 ggggaaggca tcgtctatcc atgattccca ctccaaatca atacgagccg cgccgccggc
      781 cgcttcccga atcaggcgat ccggcgctgc cgtttcttca cgtgaaccag cagcagcgag
      841 atcgcggccg gcgtcatgcc ggagatcctc gccgcctgcc caatgtcgtt cggccggatc
      901 ctcgcgagct tctcgcgcag ctcgttcgac aggccgttga cctggccgta gtccaagtcc
      961 gccggcaaca ccgtggccgc ttggcgcttg tgccgcgcga tctcggcgct ttgacggtcg
     1021 acgtacccgg cgtaacgagc ttcgatcgcg aggctcccgg tccaaagcgc cgcggactcg
     1081 tcgtcgagcg cggcgagcgc gggcgacgcg cccacgcgtg cgagccccgc gacgtcggcg
     1141 tagccgacgc cgggccgccg cagcagtccg tacgccgaca cctcgcgtgc gagcggctcc
     1201 gcgaacgcac cgcctacggc caagtcggcg ggtcgcacga cgatgccgtt cagccgagcg
     1261 ctttcctccg ccagccagtc gcgccgcgat tcgaatttga cccaacgttc gtcgccgacc
     1321 acaccgagct cgcgaccgac cggcgtcagg cgtaagtccg cgttgtcctc gcgcaagctg
     1381 agccggaact cggcgcggct cgtgaacatc cgataaggct cggcgacacc gcgtgtcacc
     1441 aggtcgtcga ccaggacccc gatgtaggcc tcgtcccggc ggggacacca cgggtctttg
     1501 ctgcgcacac gaagcgcagc attgacgccg gcgagcaggc cctgcgccgc cgcttcctcg
     1561 tacccg
//
LOCUS       DATCUD010000137         2406 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_36930, whole genome shotgun sequence.
ACCESSION   DATCUD010000137 DATCUD010000000
VERSION     DATCUD010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36930"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1589
                     /locus_tag="VIQ99_01970"
     CDS             <1..1589
                     /locus_tag="VIQ99_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181935.1"
                     /translation="GVSVVDDLAADLATPAVISMPPGAVDSSTGAGTGANGTGQINVT
                     NIAVPANGSVTVVFTAVIPAGTPPSTPIDNTANVLNPGGPGAAPAAPQLIVSPSAIPS
                     SGAKPLYLRSTPTVALSRNPPTTDPAVTVAFGTPVAWTLAPALSLPVTLPAGNISVPL
                     WLRRNNNTGANTRTIQVTLANTATGTIGTAAQTLTTLPSAGSPQLVNFVVPNPAATTF
                     PAGSAFRVTVTQTAPNIVARSTLVYPVGATAGSYSRAVLNSATVINVDSVQTFDAAYA
                     GGAATGSFNIGSTVFVRAVISDPFGSFDIASARISIVDPNSVVRVANAPLPQVADSAA
                     ATRTYEYAYVVPAGAPPGGWSAQVTGVEGTEGIVTHTRVGGFVVLPDLPALRVTKTVD
                     VLSDPISGATNPKQIPGSIQRYRVTVANTGPGAVDASTLVIADLVPANAQLVVSGSST
                     VQFVDGSVPSGLTFNYASNAAFSNQPGGAAPYTYVPTANGDGVDPAVTGLRIAPAGSM
                     AAASGGNQPSFSVEFRVRVR"
     gene            1646..2332
                     /locus_tag="VIQ99_01975"
     CDS             1646..2332
                     /locus_tag="VIQ99_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008293544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9181936.1"
                     /translation="MSGNSINGDLTVRVTVDTAKMDWTPSPSGTVWRKRVHLVGPPES
                     GQVTSVVRYEPRSTFHAHAHPDGEEILVLEGVFSDEHGDWPVGTYLLNPEGFRHAPFS
                     REGCVIFVKLRQYPGRARNHVAVVSGELPWQATGRSGVEVRPLYSQPEFADTTRLERW
                     AAGTRLGRIEYANGAELFVLDGAFTDEGGSFARGAWLRLPPGSAHSPETERGCELYVK
                     EGGFAYLNAG"
BASE COUNT          381 a          830 c          826 g          369 t
ORIGIN      
        1 ccggcgtcag cgtcgtcgac gatctcgccg ccgatctggc gacgccggcc gtgatcagca
       61 tgccgccggg cgccgtggac tcgtcgaccg gcgccggaac gggtgcgaac ggcacggggc
      121 agatcaacgt cacgaacatc gcggtgcccg cgaacggcag cgtgacggtc gtgttcacgg
      181 ccgtgattcc ggccggcacg ccgccgagca cgccgatcga caacacggcc aacgtcttga
      241 acccgggtgg tcccggcgca gccccggccg ctccgcagct gatcgtctcg ccgtccgcga
      301 ttccgtcgtc gggcgccaag cccctgtact tacgcagcac gccgaccgtc gcgttgtcgc
      361 ggaatccgcc gaccacggac ccggccgtca cggtcgcgtt cggcacgccg gtggcgtgga
      421 cgttggcgcc ggcgctgagc ctgcccgtga cgctgcccgc cggcaacatc tcggtgccgc
      481 tctggctgcg ccgcaacaac aacaccggcg cgaacacgcg cacgattcaa gtcacgctcg
      541 cgaacacggc cacgggcacg atcggcacgg cggcacagac gctgaccaca ctgccgtcgg
      601 cgggctcgcc gcagctcgtg aacttcgtgg ttccaaatcc cgcggcgacc acgtttcccg
      661 cgggctccgc gttccgcgtc acggtcacgc agaccgcgcc gaacatcgtg gcgcgctcga
      721 cgctcgtgta tccggtcggc gctacggccg gcagctacag ccgcgcggtg ttgaacagcg
      781 cgaccgtgat caacgtcgac agcgtgcaga cgttcgacgc ggcgtacgcc ggcggcgcgg
      841 cgaccggcag cttcaacatc ggcagcacgg tattcgtgcg cgcggtgatc agcgatccgt
      901 tcggcagctt cgacatcgct tcggcgcgga tttcgatcgt cgacccgaat tcggtcgtgc
      961 gcgtcgcgaa cgcgccgttg ccgcaggtcg cggactccgc cgccgcgacc cggacgtatg
     1021 aatacgcata cgtcgtgccg gccggtgcgc cgcccggcgg ctggtcggca caagtcacgg
     1081 gcgtggaggg caccgaaggc atcgtcacgc acacgcgcgt cggcggcttc gtcgtgctgc
     1141 cggacttgcc cgcgctacgc gtgacgaaga cggtcgatgt gctctcggat ccgatcagcg
     1201 gcgcgacgaa cccgaaacag attccgggca gcatccagcg gtatcgcgtc acggtcgcga
     1261 acaccgggcc cggcgcggtc gacgcgagca cgctcgtgat cgccgacctc gttcccgcga
     1321 acgcacagct cgtcgtgtcg ggaagctcga cggtgcagtt cgtcgacggt tcggtgccga
     1381 gcggtctgac cttcaactac gcgtcgaacg cggcgttctc gaaccaaccc ggcggcgcag
     1441 cgccgtacac gtacgtgccc accgcgaacg gtgacggcgt cgaccctgcc gtcacgggat
     1501 tgaggatcgc gcccgccggt tcaatggccg ccgcctccgg cggcaatcag ccgagcttca
     1561 gcgtcgaatt ccgggttcgc gtgcgataga tccgcgagaa cgtagtcgcc ttgatcgtcc
     1621 cgggcgagta gcgtatctcg acggaatgag cggaaactcg atcaacggcg atctcacggt
     1681 ccgcgtcacc gtcgatacgg ccaagatgga ttggacaccg agcccgagcg gcacggtgtg
     1741 gcgcaagcgc gtgcatcttg tggggccgcc ggaatcggga caggtcacgt cggtcgttcg
     1801 ctacgaaccg cgctcgacgt tccacgccca cgcgcatccc gacggcgagg agatcctcgt
     1861 gctcgaaggc gtgttctcgg acgagcatgg cgattggccc gtcggcacct atctattgaa
     1921 ccccgaaggc ttccgccatg cgccgttctc gcgcgagggc tgcgtgatat tcgtgaagct
     1981 gcggcaatac ccgggacgcg cgcgcaatca cgtcgcggta gtgagcggtg agctgccatg
     2041 gcaggccacg ggcaggtcgg gtgtcgaggt gcggccgctg tattcgcagc ccgagttcgc
     2101 ggatacgacg aggctcgagc gctgggcggc cggcacgcgg ctcggccgga tcgagtatgc
     2161 gaatggcgcc gagctgttcg tgctcgacgg cgcgttcacc gacgaaggcg ggagcttcgc
     2221 gcgcggcgct tggctgcgcc tgccgcccgg cagtgcccac tcgcccgaga cggagcgcgg
     2281 ctgcgagctg tatgtcaaag agggcggctt cgcctatttg aatgccgggt gagccgaaac
     2341 gcagtacgat ggccgcggga gggttgccac atgcgtgatc gtcgagcccg ggccgccatc
     2401 gcaatc
//
LOCUS       DATCUD010000138         1656 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15680, whole genome shotgun sequence.
ACCESSION   DATCUD010000138 DATCUD010000000
VERSION     DATCUD010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1656
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15680"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..632
                     /locus_tag="VIQ99_01980"
     CDS             111..632
                     /locus_tag="VIQ99_01980"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9181937.1"
                     /translation="MSGLWTTIGQRGVLLGLAVVTAACSSLNTTPSRPSPGPVVAPAP
                     APTDGPLPTAPPASEPSARTIPSSPTPAPPRDVAPAPRPQSDASSASSVLLQQSRTQR
                     AAGSLPTAKASLERALRLDPNNPEIWLELGEIELQTGNASQAATMARKALTLAGRDGS
                     VTARAERLLRAAE"
     gene            complement(615..1523)
                     /locus_tag="VIQ99_01985"
     CDS             complement(615..1523)
                     /locus_tag="VIQ99_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014235346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9181938.1"
                     /translation="MTLTELKYLVAVAEEQHFGRAAERSFVSQPSLSAAIKHIEDELG
                     VRVFERSKRGVALTDIGKEIVAQARRTLDEAARIKTVAKQGQNQLHGALRLGVIHTIA
                     PYLLPPLVAALRKLAPEMPLDIEENMTANLDRLLKSGEIDVAILALPYEAAGIEVEPL
                     YDEEFRVVVPASHRFARRRTVPIGELDGGELLLLPVGHCLRDQVLGACAEFLQPPPPG
                     RLGNSLETLRSMVASGLGVTVLPATALGERYSSPLAKAVPFAEPRPKRRVVIAWRTGF
                     ARPNAVRKIVEAIRSLDLPVELLGGA"
BASE COUNT          292 a          582 c          530 g          252 t
ORIGIN      
        1 gccatcgccg tacccgtgcc cgacaacgac tactattcgc gtgtcttcgg ctgcaacggc
       61 gaaaccggct tcggcgcccg cgtgcgttcg tggttcggcg acggcgcaca atgagcgggc
      121 tgtggacaac gatcgggcag cgcggcgtgc tgctcgggct cgcggtcgtg accgcggcct
      181 gctcgtcgct gaatacgacg ccttcgcggc cgtctccggg ccccgtcgtg gcacccgcgc
      241 cggcaccgac tgacggtccg ttgccgacgg caccacccgc ttccgagccc agcgctcgaa
      301 cgatcccgtc ttctccgacg ccggcgccgc cgcgcgacgt cgctcccgca ccgcgaccgc
      361 aaagcgacgc gagcagcgcg agcagcgtgt tgttgcagca aagtcggacg cagcgcgcgg
      421 ctggcagcct cccgaccgcc aaggcttccc tggagcgagc gttgcgactc gatccgaaca
      481 acccggaaat ctggctcgag ctcggcgaga tcgagctgca aaccggcaat gcctcgcagg
      541 cggcaacgat ggcgcgcaaa gcgctcacgc tcgcgggccg cgacggcagc gtaacggctc
      601 gagccgagcg cctgttacgc gccgccgagt agctcgaccg gaagatcgag cgaacggatc
      661 gcctccacga tcttgcgcac ggcgttgggc cgcgcgaaac cggtacgcca cgcgatcacg
      721 acccgccgtt tgggccgcgg ctccgcgaac gggactgctt tcgcgagcgg cgagctgtaa
      781 cgctcgccga gcgccgtggc cggcagcacg gtgacaccga gcccggacgc gaccatgctc
      841 cggagcgttt cgagcgagtt gccgagccga cccggcggtg gcggctgcaa gaactcggcg
      901 caggcgccga gcacctgatc ccgcagacaa tgcccaaccg gcaacagcag cagctcgcca
      961 ccgtcgagct cgccgatcgg caccgtacga cggcgcgcga atcgatgact ggccggcacc
     1021 acgaccctga actcctcgtc gtagagcggc tcgacctcga tgccggccgc ttcgtacggc
     1081 aacgcgagaa tcgccacatc gatctcgccg ctcttgagca gccgatcgag attcgccgtc
     1141 atgttctcct cgatgtcgag cggcatctcc ggcgcgagct tacgcagcgc cgccacgagc
     1201 ggcggcaaca gatacggcgc aatggtgtgg atcacgccga gacgcaaagc gccgtgcaac
     1261 tgattctgac cctgcttcgc gacggtcttg atccgcgcgg cctcgtcgag cgtgcgccgc
     1321 gcctgcgcga cgatctcttt gccgatgtcc gtgagcgcga ctccgcgctt gctccgctcg
     1381 aacacacgca cgccgagctc gtcctcgatg tgcttgatcg ccgccgacag gctcggctga
     1441 ctcacgaacg agcgctcggc ggcgcggccg aaatgctgtt cttcggccac ggcgacgaga
     1501 tatttgagct cggtcaaagt cacgattact tttgtcgacc gataggtttt agctatggat
     1561 tcgatcctag cagagtattg gccgaacgac agccgtggcc actagaatca tcagtgacgg
     1621 agaacggcgg agaacccatg gccaaacgca tgaaga
//
LOCUS       DATCUD010000139         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_43948, whole genome shotgun sequence.
ACCESSION   DATCUD010000139 DATCUD010000000
VERSION     DATCUD010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43948"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VIQ99_01990"
     CDS             <1..278
                     /locus_tag="VIQ99_01990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181939.1"
                     /translation="LARSCRYYLKGVLNHLGARRHEVHTPDYALLTERATHYRYLNYH
                     VSKALQVEQLERAGFVSIELFDERGQPTGVQRNDRDRWIHYAARKPA"
     gene            313..1413
                     /locus_tag="VIQ99_01995"
     CDS             313..1413
                     /locus_tag="VIQ99_01995"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9181940.1"
                     /translation="MQIRILDRLADLTSYAGRWNELLSRSASNSVFLTSEWIEPWWQV
                     FGTDLELLVLVAEEHGRLIGIAPLMIAPHPSPGGRHIRTLMFVGQGGDTLAEHLDFVL
                     EPGRERELIGAFVEHLCGSLRRRWDALLLQRVLESSISRPLVIEQLGQRGVAVSTRNE
                     IPSPYLTLPESMDALLAAKSSNFRYQYQRSRKRLLAAGAARFLEAGRDIALDEAMRAL
                     AELNRERWQDLGSSFRTERYRRFHTALAQRLKDRDWLWLSVLTLDGQPIAARYDFVYG
                     GKVWCMQGGWKPSLQSMNLGMIMTGEVIAWAIGRGLREYDFLGGEDHYKRRWATAERT
                     LVDLEAFNPATLRGRLWPRLRSLKRALSPASA"
     gene            complement(1382..>1730)
                     /locus_tag="VIQ99_02000"
     CDS             complement(1382..>1730)
                     /locus_tag="VIQ99_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181941.1"
                     /translation="TRGRLLHYAWLADRREDMVVYEVDQTFHYAIPGAMLYDAHTVPE
                     ARGQGLHTRSLAARLHDARSLASARWAHVGCLANNHASRAVIEKGGFAYYTSLYRLKT
                     LGLAKRWQATGRA"
BASE COUNT          306 a          588 c          558 g          278 t
ORIGIN      
        1 gcctcgcccg cagctgtcgt tactatttga agggcgtcct gaaccacctg ggcgcgcgcc
       61 gtcacgaggt tcatacgccc gactacgcgc tgctcacgga gcgcgccacg cactaccgat
      121 acctgaacta ccacgtctcc aaagcgctgc aggtcgaaca actcgagcga gccgggttcg
      181 tgagcatcga gctgttcgac gagcgaggcc aaccgaccgg cgtgcaacgc aacgaccgcg
      241 atcggtggat ccattacgcg gcacgcaagc cggcttgacg ccgcgcaaga cccgccggcc
      301 agcggggggc cgatgcagat tcgaatcctc gaccgcctcg ccgaccttac gagctacgcg
      361 ggtcgatgga acgagcttct ctcgcgaagc gcatcgaact cggtcttcct gacctccgaa
      421 tggatcgagc cctggtggca agtcttcggc accgatctcg agctcctggt gctcgtcgcc
      481 gaggagcacg gccggctgat cggcatcgcg ccgctgatga tcgcgccgca cccgtcgccg
      541 ggtgggcgtc acatccgcac gctgatgttc gtcggccaag gcggcgacac gctggccgag
      601 catctcgact tcgtcctcga gcccggtcgc gagcgcgagc tgatcggcgc gttcgtcgaa
      661 catctgtgcg gatcgctgcg ccggcgctgg gacgcgctgc tgctgcagcg cgtgctcgaa
      721 agctcgatca gccgcccgct agtgatcgaa cagctcgggc aacgaggcgt tgccgtcagc
      781 acgcgcaatg agatcccgtc gccgtacctg accttgccgg aatcgatgga cgcgctgctc
      841 gcagcgaaga gctcgaactt ccgctaccag tatcaacgca gccgcaagcg cctgctcgcg
      901 gcgggcgcgg cgcgcttcct ggaggcgggc cgggatatcg cgctcgacga ggccatgcga
      961 gcgctcgccg agctgaaccg cgagcgctgg caagatctgg gatcgagctt tcgcaccgag
     1021 cgctaccggc gattccatac ggcgctcgcg caacgcctca aggatcgcga ttggctgtgg
     1081 ctatccgtcc tcaccctcga tggacaaccg atcgcggcac gctacgactt cgtctacggc
     1141 ggcaaggtct ggtgcatgca gggcggctgg aagccgtctc tgcagagcat gaacttggga
     1201 atgatcatga ccggcgaggt catcgcatgg gcgatcggcc gcgggctgcg cgagtacgac
     1261 ttcctcggtg gcgaagacca ctacaaacgc cgttgggcaa cagcagagcg gacgctcgtc
     1321 gatctcgagg cgttcaaccc cgcgacgctg cgcggccggc tttggccgcg gctgcgttcg
     1381 ctcaagcgcg ccctgtcgcc tgccagcgct tagcgagtcc aagcgtcttc agacgataca
     1441 aagacgtgta gtacgcgaac ccgcccttct cgatcacggc acgcgacgca tggttattcg
     1501 cgagacagcc gacatgagcc caacgcgccg aggccaacga ccgcgcgtcg tgcagccgag
     1561 cggccagcga tcgtgtgtgc aaaccctgcc cgcgcgcctc ggggaccgtg tgagcgtcgt
     1621 acagcatcgc gcccgggatc gcgtagtgga acgtctggtc gacctcgtac acgaccatgt
     1681 cctcgcgccg atcggcgagc caggcgtaat gcaggagacg accgcgtgtc
//
LOCUS       DATCUD010000140         3063 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86632, whole genome shotgun sequence.
ACCESSION   DATCUD010000140 DATCUD010000000
VERSION     DATCUD010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86632"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..434
                     /locus_tag="VIQ99_02005"
     CDS             <1..434
                     /locus_tag="VIQ99_02005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181942.1"
                     /translation="GSGDTRLLRGEQVDRIRVLEANREAEIKNGTGATFEPVLLGITK
                     ASLATESFISAASFQETTRVLTEAAVRGLRDDLRGLKENVIVGRLIPAGTGYAHHEDR
                     RRTQEEILAAELKELDVQQQLKAEAAAAAEASKAAEESPAT"
     gene            712..1086
                     /gene="rpsL"
                     /locus_tag="VIQ99_02010"
     CDS             712..1086
                     /gene="rpsL"
                     /locus_tag="VIQ99_02010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002958885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY9181943.1"
                     /translation="MATTNQLVRKARSAQKTKSNVPALNASPQKRGVCTRVYTTTPKK
                     PNSAMRKVARVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGTL
                     DCGGVGDRRQGRSKYGAKRPKG"
     gene            1089..1568
                     /gene="rpsG"
                     /locus_tag="VIQ99_02015"
     CDS             1089..1568
                     /gene="rpsG"
                     /locus_tag="VIQ99_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006747218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY9181944.1"
                     /translation="MSRRAQAPRRSSLPDPKFGNPMLAKFINMVMKSGKKSVAEKIVY
                     GAIDRMSERVGKDQGRAIELLSQALDNIKPAVEVKSRRVGGATYQVPVEVRATRRETL
                     AMRWAIEAARTRSEKSMAMRLAHELIDAAENRGAAVKKREDTHRMADANKAFAHYRW"
     gene            1590..>3063
                     /gene="fusA"
                     /locus_tag="VIQ99_02020"
     CDS             1590..>3063
                     /gene="fusA"
                     /locus_tag="VIQ99_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY9181945.1"
                     /translation="MARKTPIARYRNIGIMAHIDAGKTTTTERILFYTGVSRTIGEVD
                     DGAAIMDWMEQEQERGITITSAATTCFWKGMARSLPEHRINIIDTPGHIDFTIEVQRS
                     LRVLDGAVAVFCSVGGVEPQTETVWRQANKYGVPRVAYVNKMDRSGADFFRVLDQIRD
                     RLTPNAVAVQLPIGAEDEFEGVVDLVTMKAIRWDDRTLGMRFFEGEVPAALSARAREL
                     RTKLIETAVEGDEQLLEAFLNGAELTVEQIRSGLRARCLKGEIVPVLCGSAFKNKGVQ
                     ALLDAVIFYLPSPSDRPAVLGFVDGAEGHRAPSDKEPFAAFAFKIATDAAEGSLTFFR
                     VYSGVLKTGDAVYIPQRDARETVGRLVQMHANERSEIAEVRAGDIAAAVGLRDVMTGD
                     TLTDPDAAITLEMMEFPEPVISAAIEPKTQEDQDKLAQALAKLVREDPTLRVHVDAES
                     GQTILSGMGELHLEIAVDRMLREFGVAANVGRPQVAYRETI"
BASE COUNT          588 a          960 c         1027 g          488 t
ORIGIN      
        1 cgggctcggg cgacacgcgc ctcttgcgcg gcgagcaggt ggaccgcatc cgcgtgctcg
       61 aggcgaaccg cgaggccgag atcaagaacg gcacgggggc gacgttcgag cccgtgctgc
      121 tcggcatcac gaaggcctcg ctggccacgg agtcgttcat ctcggcggcg tcgttccaag
      181 agacgacgcg cgtcctcacg gaggccgccg tccgcggctt gcgcgacgat ctgcgcggcc
      241 tcaaggagaa cgtgatcgtg ggtcgactga tcccggccgg cacgggttat gcccatcacg
      301 aggatcggcg ccggacccag gaagagatct tggccgcgga gctcaaggag ctcgacgtgc
      361 agcagcagct gaaagccgag gccgccgcgg cggccgaggc cagcaaggcc gcggaggagt
      421 cacccgcgac ttaaaaggag tcggttggcc gcaaaatgct cctgcatttg cggcacaacc
      481 gccatccctg gcggttggcc gagaattgct cctgcattct cggcacgccc gccatccatg
      541 gcggttgacg ccagtgcggc ccgaagccta gaatttcggg ctgtcctggc aaacctaagg
      601 ccggtttcgc gaaccagact cttcgcggaa cggggctaga ccagggcgtc tgttggcccg
      661 gatgccgcgc tcgaagccgg taacgggcca aactttattt ggaaacattc aatggcgacg
      721 accaaccaac tcgttcgtaa agcgcgtagc gcacagaaga ccaagagcaa cgtcccggcg
      781 ctgaatgcgt cgccgcagaa gcgcggtgtc tgcactcgcg tgtacacgac cacgccgaag
      841 aagccgaact cggccatgcg gaaagtggcg cgcgtccggt tgacgaacgg attcgaggtc
      901 acgagctaca tcggcggcga aggccacaat ctccaggaac actcggtcgt gctgatccgc
      961 ggcggccgcg tcaaggatct ccccggcgtc cgataccaca tcgtgcgcgg aacgctcgac
     1021 tgcggcggcg tcggcgatcg tcgtcagggt cgctcgaagt acggcgccaa acggcccaaa
     1081 ggttaactat gtcgcgtaga gcacaagccc ctcgtcgcag ctcgctgccg gacccgaaat
     1141 tcggtaatcc gatgttggcc aagttcatca acatggtcat gaagagcggc aagaagtctg
     1201 tggccgagaa gatcgtctac ggcgcgatcg accgtatgtc ggagcgcgtc ggcaaggacc
     1261 aagggcgagc catcgagctg ctcagtcagg cgctcgacaa catcaagccg gccgtcgaag
     1321 tgaagtcccg tcgtgtcggc ggcgccacgt accaggtgcc ggtcgaggtt cgagccacac
     1381 ggcgcgagac gttggcgatg cggtgggcca tcgaggcggc gcgcacgcgc tcggagaaga
     1441 gcatggcgat gcgcctcgcg cacgagctca tcgatgcagc cgagaatcgc ggcgccgccg
     1501 tcaagaaacg cgaagacacg catcgcatgg cggacgcgaa caaagcgttc gcacattatc
     1561 gttggtagtg atggtcttag ggccccgaaa tggcacggaa gacccccatc gcgcggtatc
     1621 ggaatatcgg catcatggcg cacatcgatg ccggcaagac gacgactacc gagcgcatcc
     1681 tgttctacac gggggtatcg cgcacgatcg gtgaggtcga tgatggcgcg gccatcatgg
     1741 actggatgga gcaagagcag gaacgcggca ttacgatcac gtccgccgcg acgacctgct
     1801 tctggaaggg catggcacgc agcctgcccg agcatcgcat caacatcatc gacacgcccg
     1861 ggcacatcga tttcacgatc gaggtgcagc gctcgctgcg cgtgctcgac ggcgccgtgg
     1921 ccgtgttctg ctcggtcggc ggcgtcgagc cgcagaccga gaccgtgtgg cgccaggcga
     1981 acaagtacgg agtgccgcgc gtcgcctacg tgaacaagat ggacaggtcc ggcgccgact
     2041 tcttccgcgt gctcgaccag attcgtgacc gcctcacgcc gaacgccgtt gccgtgcagc
     2101 tgccgatcgg cgccgaggac gagttcgagg gtgtcgtcga tctcgtcacg atgaaggcga
     2161 ttcggtggga cgaccgaacg ctcggcatgc gcttcttcga aggcgaggtc cccgcggcac
     2221 tcagcgcgcg cgcgcgcgag cttcgcacga agctgatcga aaccgcggtc gagggcgacg
     2281 agcagttgct cgaagcgttc ctgaacggcg ccgagctcac ggtcgagcag atccgctcgg
     2341 gtctgcgtgc ccgctgcttg aagggcgaaa tcgtgcccgt gctgtgcggc tccgcattca
     2401 agaacaaggg cgtccaagct ctgctcgatg ccgtcatctt ctatttgccg tcgccgtcgg
     2461 atcggccggc cgttttgggt ttcgtcgacg gagccgaagg ccaccgtgca ccgagcgaca
     2521 aggagccgtt cgcggcgttc gctttcaaga tcgccacgga tgctgccgaa ggcagtctga
     2581 ctttcttccg cgtttactcg ggcgttctca agaccggcga cgccgtctac attccgcaac
     2641 gggatgcgcg cgagacggtc ggacgcctcg tccagatgca cgcgaacgaa cgttccgaga
     2701 tcgccgaggt gcgagcgggc gatatcgcgg cggcggtcgg gttgcgcgac gtcatgaccg
     2761 gcgacacgct cacggatccc gacgcggcca tcacgctcga gatgatggag ttcccggagc
     2821 ccgttatttc ggctgcgatc gagccgaaga cccaagaaga tcaggacaag ctggcgcagg
     2881 cgctcgcgaa gctcgtgcgc gaggatccga cgttgcgcgt ccacgtcgac gccgaatcgg
     2941 gtcaaacgat cttgagcggt atgggcgagc tgcacctcga gatcgccgtc gaccgcatgc
     3001 tgcgtgagtt cggtgtggcc gcgaacgtcg gccggccgca ggttgcgtac cgcgagacga
     3061 tcg
//
LOCUS       DATCUD010000141         1579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65369, whole genome shotgun sequence.
ACCESSION   DATCUD010000141 DATCUD010000000
VERSION     DATCUD010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65369"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..532)
                     /locus_tag="VIQ99_02025"
     CDS             complement(<1..532)
                     /locus_tag="VIQ99_02025"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9181946.1"
                     /translation="MSLKPGTRFGCYAITAPLGAGGMGEVYRARDTELGRDVAIKVLP
                     ESFTNDAARVARFEQEAKTLAALNHPNIAHIFGIERSGHTTALAIELVEGPTLVERID
                     QGRLSVDEALSIATQIAAALEAAHERGIVHRDLKPANIKLAADGTVKVLDFGIAKGLG
                     MRATSGSQPPALATPAM"
     gene            619..>1579
                     /locus_tag="VIQ99_02030"
     CDS             619..>1579
                     /locus_tag="VIQ99_02030"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY9181947.1"
                     /translation="MADGNLIRFAAFRGLESAFMQSTPLKRAVSRWQVVGMSMNSVIG
                     SGVYLLPAAAAALLGPASLWAVPLAGAAVMLLALCFAEAGSHFDEPGAGYVYTREAFG
                     EFVGFQVGWMTWLARLASAAALWNAFVQALAFVLPGADEGSTRVVLILLPLTFFCLVN
                     AIGVRQAARLEVGLTIAKLLPLLLLVVAGIAAIDGSLLVLTDTPDLTSLGAASVLLLF
                     AYAGFENTAAAAGEFKNPKRDVPFALITVVVAVTLLYTLIQLVTLGTLPDLATRTEGA
                     PLAESATLVMGAWAGLLMTLGAVLSIGGSVGNTMLVSSRYLYSL"
BASE COUNT          211 a          531 c          542 g          295 t
ORIGIN      
        1 tcatcgccgg ggtcgcgagc gcgggcggct gcgagccgct cgtcgcgcgc atgccgagcc
       61 ccttcgcgat gccgaagtcg agcaccttca cggtgccgtc ggcggcgagc ttgatattcg
      121 cgggcttcaa gtcgcggtgc acgatgccgc gctcgtgcgc ggcctcgagc gcggccgcga
      181 tctgcgtcgc gatcgagagc gcctcatcga ccgacaaacg gccttgatcg atgcgctcga
      241 cgagcgtggg gccttcgacg agctcgatcg cgagcgcggt cgtgtggccg ctgcgctcga
      301 tcccgaagat gtgcgcgatg ttcgggtggt tcagcgcggc gagcgtcttc gcttcctgct
      361 cgaaacgtgc gacgcgcgcg gcatcgttcg tgaacgactc cggcagcacc ttgatcgcga
      421 cgtcgcgacc gagctcggtg tcgcgcgcgc gatagacctc gcccatgccg cccgcgccga
      481 gcggagcggt gatcgcgtag cagccgaagc gcgtgcctgg tttcagcgac atgacccctc
      541 cgaacctcga gcgacgggtc cctgtcaccg gtgacgggac tctacagcag gggtcacggg
      601 ctagccaggc ctcgcccgat ggcggacggg aacctgatac gattcgccgc gtttcgtggg
      661 ctcgagagcg cgttcatgca gtcgacgccg ctcaagcgcg ccgtcagccg ttggcaagtc
      721 gtcggcatgt cgatgaacag tgtcatcggc agcggcgttt atttgctccc ggccgcggcc
      781 gcggcactgc tcgggcccgc cagcctctgg gcggtgccgc tcgccggggc cgcggtgatg
      841 ctgctcgcac tctgcttcgc agaggctggc agtcacttcg acgagcccgg ggccggctac
      901 gtgtatacgc gcgaggcctt cggcgaattc gtcggcttcc aagtgggttg gatgacatgg
      961 ttggcgcgcc tcgcttcggc cgcggcgctg tggaacgcct tcgtccaagc tctggcattc
     1021 gtgcttcccg gcgccgacga gggcagcacg cgcgtcgtgc tgatcctgct gccgctgacg
     1081 tttttttgcc tggtcaacgc gatcggtgtg cggcaggcag cgcggctcga ggtcggtctc
     1141 acgattgcga agctcctccc gttgttgctg ctggtcgtcg cgggcatcgc ggccatcgac
     1201 ggctcgttgc tcgttcttac ggatacgccc gacctcacga gtctcggcgc cgcctcggtg
     1261 ctgctgctgt tcgcgtatgc ggggttcgag aacacggcgg ccgccgccgg cgaattcaag
     1321 aacccgaaac gcgacgtgcc gttcgcgctg atcacggtcg tcgttgcggt gacgctgctt
     1381 tacacgctga tccagctcgt aaccctcgga acgctcccgg acctcgccac ccgaaccgaa
     1441 ggagcacccc tcgcggaatc cgccacgctc gtgatgggtg cctgggccgg cttgctgatg
     1501 acgctcggcg cggtgctgtc gatcggcggc agcgtcggca acacgatgct cgtgagctcg
     1561 cgttacctgt actcgctcg
//
LOCUS       DATCUD010000142         2824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79596, whole genome shotgun sequence.
ACCESSION   DATCUD010000142 DATCUD010000000
VERSION     DATCUD010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79596"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(226..2019)
                     /locus_tag="VIQ99_02035"
     CDS             complement(226..2019)
                     /locus_tag="VIQ99_02035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007992752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015103 - inorganic anion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY9181948.1"
                     /translation="MIDRDPADSHARELGRLTARRAAHDLPAWERWLPGARVLRDYQA
                     PWLRHDLVAGLVLTAMLIPVGIAYAVASGVPGIHGLYATIVGLLAYALFGPSRILVLG
                     PDSSLAAIILAVVLPLSGGDPVRAIALAGMMAVVSGVVCILAGAVRLGFVTELLSKPI
                     RYGYMNGIALTVLISQIPSFLGFSIDGDAPLRDLWAIATGVLGGETHGITLAIGAGAL
                     AIIVLLKGNTRWPGALIAVVAATTLVGALDLAARADVSVLGSLPQGLPAFDLPWITTA
                     DIGPVVIGGCAVAMISFADTSVLSRVYAAKTRSFVDPNQEMVGLGAANLAVGLFQGFP
                     ISSSSSRTPVAETAGAKTQLSGVVGALAVAVLLLVAPDALRNLPTSALAAVVIASAIG
                     LIEIRDLRRIYRIQRWECWLSIGCTVGVVVLGAIPGIGLAIVIAVVEFLWDGWRPYSA
                     VLGRVESVKGYHDITRYPDARQIPGLVLFRWDAPLFFANAELFQTRVWNAVAAAPTPV
                     RWLVVAAEPVTSVDITSADMLAELDDALNAAGIRLGFAEMKDPVKDKMKRFGLFGRLG
                     EEAFFPTIGVAVSRYLKTHSVDWVDWENGAR"
     gene            complement(2025..>2824)
                     /locus_tag="VIQ99_02040"
     CDS             complement(2025..>2824)
                     /locus_tag="VIQ99_02040"
                     /inference="COORDINATES: protein motif:HMM:NF016241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HEY9181949.1"
                     /translation="DSGDRLFGELLEGAAPSRIQVGAAGASSDLATGVVVRMNPIEAR
                     IVERIEMSVDLGYSLTKANAAEQTSLGYDFQYRDESRLMRLNADASTSVSESDPPSTR
                     LNASASWRRFLEGREWDPVVIGQVERNDELGLDRRLTAGGGMSRWITDTNRRRMAFFG
                     GLVYGHETSNGVADAEGNVEAALGLTAEWFRYDEPELDVSTRLAIYERVTGTSKTRGN
                     LDVDFRWEMFEDSFWGFNVYYSFDTDPGSVDASKSDYGIVTSLGWDF"
BASE COUNT          518 a         1000 c          897 g          409 t
ORIGIN      
        1 atcttggatg agatagccct acccctcggt ttacgctcgg ccgcacgggt cttatcccgc
       61 acggccgctc atattataga ggggagacgc gcgcgggcgt gcgcggcgtg ggtcaagttt
      121 tgtcgcattg cgggcccgca cgtccggccc aggcccgact cctcgtggtc ggtccgaagg
      181 cgtcggcgcc cgatccgccc gaacggagca gatctcggtc gaagctcagc gcgcgccgtt
      241 ctcccaatcg acccaatcca cggagtgggt cttgagatag cggctcaccg ccacgccgat
      301 cgtcgggaaa aacgcctcct cgccgagcct cccgaacaac ccgaagcgct tcatcttgtc
      361 tttcacgggg tccttcatct ccgcgaagcc gagccggata ccggccgcat tcaacgcatc
      421 gtcgagctcc gccagcatgt ctgcggacgt gatgtcgacg ctcgtgaccg gctccgcggc
      481 caccacgagc cagcgcaccg gagtcggcgc cgccgctacg gcgttccaca cgcgcgtctg
      541 aaacagctcg gcgttcgcga agaacaacgg cgcgtcccag cgaaacagca cgagccccgg
      601 aatctggcgc gcatcgggat aacgagtgat gtcgtggtag cccttgacac tctcgacgcg
      661 ccccaacacc gcagaatatg gacgccagcc gtcccagagg aactcgacga ccgcgatcac
      721 gatagccaac ccgatccccg gaatcgcgcc gagcacgacc acgccgaccg tgcaaccgat
      781 cgagagccag cattcccagc gctgaattcg atagattcgg cgcaggtcgc ggatctcgat
      841 cagaccgatc gccgaggcga tcacgacggc ggccagcgcg ctcgtcggca agttccgcaa
      901 cgcgtcgggc gcaaccaaca gcagcacggc caccgcgagc gcgccgacga ccccgctcag
      961 ctgcgtcttg gcgcccgcgg tctcggccac cggagtccgt gacgagctgc tgctgatcgg
     1021 aaagccttga aagagtccga cggcaaggtt cgctgcgccg aggcccacca tctcctgatt
     1081 ggggtccacg aaggagcgcg tcttggccgc gtagacccgc gagagcacgc tggtgtcggc
     1141 gaacgagatc attgcgaccg cgcagccgcc gatcaccacg gggccgatgt cagcagtcgt
     1201 aatccacgga aggtcgaacg cgggcagccc ttgcggcaga gagcccaaga ccgagacgtc
     1261 ggcgcgcgcc gcgagatcca gcgccccgac caacgtcgtc gccgccacga cggcgatcag
     1321 ggcgcccggc cagcgcgtgt tgcccttcaa tagcacgatg atcgccagcg cgccggcgcc
     1381 gatcgcgagc gtgataccgt gcgtctcgcc accgaggaca ccggtggcga tagcccacag
     1441 gtcccgcaac ggcgcgtcac cgtcgatcga gaaaccgagg aagctcggga tctgactgat
     1501 cagcacggtc aacgcgatcc cgttcatgta gccgtagcgg atcggcttcg acagcagctc
     1561 ggtcacgaag ccgagccgaa ccgcgccggc caggatgcag accacgcccg acacgacggc
     1621 catcatgccg gccagcgcga tcgcccggac cggatccccg cctgacagcg gcagaacgac
     1681 ggccaggatg atcgcggcca gcgacgagtc ggggcccagc acgagaatcc ggctcggccc
     1741 gaacagcgcg taagcgagca ggccgacgat cgtcgcgtag aggccgtgga tgccgggcac
     1801 gccggacgca accgcgtagg cgatgccgac cggaatcagc atcgcggtca gcacgagccc
     1861 ggcgacgagg tcgtgccgca gccacggcgc ctgataatcg cgcagcacgc gggccccggg
     1921 cagccatcgc tcccaagcgg gcaggtcgtg cgcggctctc cgagcggtga gacggcccag
     1981 ctcgcgcgcg tgggaatcgg cggggtcgcg gtcgatcatc gtcgctagaa gtcccagccc
     2041 agcgacgtca cgatgccgta gtcgctcttc gacgcgtcca cgcttcccgg gtccgtgtcg
     2101 aagctgtaat agacgttgaa gccccagaac gagtcctcga acatctccca gcgaaaatcg
     2161 acgtccaagt taccgcgcgt cttcgacgtg ccggtcacac gctcgtagat cgcgaggcgc
     2221 gtggacacgt cgagctcggg ctcgtcgtaa cggaaccatt ccgcggtcag cccgagcgcc
     2281 gcttcgacgt taccctcggc gtccgccacg ccgttcgatg tttcgtggcc atagaccaag
     2341 ccgccgaaga aggccatccg ccgccgattc gtgtctgtga tccagcggct catgccgccg
     2401 ccggccgtga ggcggcggtc gagaccgagc tcgtcgttgc gctcgacctg gccgatgacg
     2461 acggggtccc attcacggcc ctcgagaaac cggcgccagc tcgccgatgc gttcaggcgc
     2521 gtgctcggcg gatcgctctc gctcaccgac gtcgaagcgt cggcgttcaa gcgcatcaga
     2581 cgcgattcgt cgcggtactg aaaatcgtag ccgagcgagg tctgctccgc tgcgttcgcc
     2641 ttggtcaggc tgtaacccaa gtccacgctc atctcgatgc gttcgacgat gcgggcttcg
     2701 atcggattca tgcgcacgac gacgccggtc gcgaggtcgc tgctcgcccc cgccgcaccg
     2761 acttggatcc tcgagggcgc ggcgccctcg agcaactcgc cgaacagccg atcaccgctg
     2821 tcga
//
LOCUS       DATCUD010000143         2694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79600, whole genome shotgun sequence.
ACCESSION   DATCUD010000143 DATCUD010000000
VERSION     DATCUD010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79600"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VIQ99_02045"
     CDS             <1..188
                     /locus_tag="VIQ99_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9181950.1"
                     /translation="YGLMPAVGAEPTFNLGGLAAKGESGALVVPLGAFSRLRSNPFFD
                     VIRTRVVESLAPAASPP"
     gene            complement(211..1467)
                     /locus_tag="VIQ99_02050"
     CDS             complement(211..1467)
                     /locus_tag="VIQ99_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008002488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9181951.1"
                     /translation="MKKLLIVLGIVGVIAVAAVAALQILEIPARLPAVPQELTQRAQI
                     PGIPNARYFVGLDTEPFVRDVLAARQREQEYLAAAGQTGELPPVALLALSGGGDKGAF
                     GSGILNGWTAKGDRPTFKAVTGVSTGALIASFAFLGSDYDAALKEVFTTIGPPDVLTR
                     RSVIAAVENDGMADNQPLWGLISKHIDQALLDAVAEQHRRGRILLIGTTNLDARQPVI
                     WNMGNIAASGAPGALDLYRSILLASAAIPGAFPPTMVRVEVDGQAYDEMHVDGGASAQ
                     VFLYPPSMPTVARSIGEEMSRKGTVYVIRNSWLSSTYDPSSRRTIDIAARAISSLIQT
                     QGFGDLYRIYLTSQRDGFDFNLAFIGSEFRYGPVEQFDTGFMNALYDYGYELGKNGYP
                     WQKVPPGWETALLATPPTTTATSPAP"
     gene            complement(1559..>2694)
                     /locus_tag="VIQ99_02055"
     CDS             complement(1559..>2694)
                     /locus_tag="VIQ99_02055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181952.1"
                     /translation="VTIEDQGSFFIGGVTKISEYASTPFAPPGQPPPRATPNQITIGQ
                     MYVQFQIPARKSGPGWPVIMVHGSTHTGAALESTPDGREGWYPYFVRRGIATYVVDQS
                     GRGRSGFDQSVLIETAARLQAGDARGAAALLPGMQRITDSGAWTAWFGHLVPQGSDIT
                     TGTLILHGAPGDPELSLATAEQPHVAPLFPMDAVAEYYKQLVPNAESTLPGSTCEPCT
                     PQTLAPQNTWTPQNLATLVERLGGAIVATHSQSGIMGHHMVRILKERGRADLVKALIT
                     VEGGCSLPQSGLTAADFDAIPYLALKGDYTATSQQCQETVDAILARRADNLGSAHAEY
                     MKLDERGLFGVTHMMMLDENNLEIADLMIEWVGEHVAKAPRRK"
BASE COUNT          418 a          891 c          911 g          474 t
ORIGIN      
        1 tttacggcct gatgcctgcg gtcggcgcag agcccacgtt caatctcggc ggtctcgccg
       61 cgaaaggcga gagcggcgcg ctcgtcgtgc ctctcggtgc gttctcgcgc ctgcgcagca
      121 atccgttctt cgacgtgatc cgcacgcgcg tcgtcgagtc gctcgcgccc gctgcgtctc
      181 cgccctgacg tcgaccgagc gctcgagcgc ttacggcgcc gggctcgtag ccgtagtcgt
      241 cggcggcgtc gcgaggagcg cggtttccca tccgggcggc accttctgcc acggatagcc
      301 gttcttgccg agctcgtagc cgtagtcgta cagcgcgttc atgaagccgg tgtcgaactg
      361 ctcgaccggg ccgtaccgga actcggagcc gatgaatgcg agattgaaat cgaatccgtc
      421 gcgctgcgag gtcaggtaga tccggtacag gtcgccgaac ccttgcgtct ggatcagcga
      481 cgatatcgcg cgcgccgcga tgtcgatcgt gcggcggctg gaggggtcgt acgtcgagct
      541 cagccacgag tttcgaatca cgtagaccgt acccttgcgg ctcatctcct cgccgatcga
      601 tcgagcgacg gtcggcatgc tcggcggata caggaacact tgcgcggacg cgccgccgtc
      661 gacgtgcatt tcgtcgtagg cctggccgtc gacctcgacg cgaaccatcg tcggcgggaa
      721 cgcgcccgga atcgcggcgg atgcgagcaa gatcgagcga tacagatcga gtgcccccgg
      781 cgcgccgctc gcggcgatgt tgcccatgtt ccagatcacg ggctggcgcg cgtccaagtt
      841 cgtcgtcccg atcaagagaa tgcggcccct gcggtgctgc tccgcgaccg cgtcgagcag
      901 agcctgatcg atatgcttcg agatcaagcc ccacagcggt tggttgtcgg ccatcccgtc
      961 gttctcgacg gccgcgatca cgctacgacg cgtcaaaacg tcgggcgggc cgatcgtcgt
     1021 gaaaacctct ttcagcgccg cgtcgtagtc ggagcccaag aacgcgaacg acgcgatcaa
     1081 cgcgccggtg ctgacgccag tgacggcctt gaacgtcggc cggtcgccct tggcggtcca
     1141 gccgttcaga attcccgagc cgaacgcgcc tttgtcgccg ccgccggaca atgcgagcag
     1201 cgctacgggc ggaagctcgc cggtctgtcc cgcggccgcg aggtattcct gctcccgttg
     1261 ccgcgcggcg agcacgtcgc gaacgaacgg ctcggtgtcg aggccgacga agtagcgtgc
     1321 attcgggatt cccggaatct gtgcacgctg cgtgagctct tgcggcacgg ccggtagccg
     1381 cgcgggaatc tcgaggatct gcaacgctgc gacggccgcg acggcaatca cgccgacgat
     1441 cccgagaacg atcagcaact tcttcatgga ggcccctgac gtgccgatct catgcggcgg
     1501 cttcgacggc aaattctagc tcacgccgcg ggcgcgcggg attgcggaca gtacctaact
     1561 acttgcggcg cggcgctttc gccacgtgct cgccgaccca ctcgatcatg aggtcagcta
     1621 tttcgagatt gttctcgtcg agcatcatca tgtgcgtgac gccgaataag cctcgctcgt
     1681 cgagcttcat gtactcggca tgagcggagc cgagattgtc ggcgcgacgt gcgaggatcg
     1741 cgtcgaccgt ttcctggcac tgctggctcg tggccgtgta gtcgcctttc agcgcgagat
     1801 acggaatcgc gtcgaagtcc gcggccgtga ggccgctctg cggcagcgag cagccgccct
     1861 cgacggtgat caacgccttg accaagtcgg cgcggccgcg ttccttcagg atgcggacca
     1921 tgtgatgacc catgatcccg gactgcgagt gcgtcgcgac gatcgcgccg ccgagccgct
     1981 cgaccagcgt cgccaggttc tgcggcgtcc aggtgttctg gggcgccagc gtctgtggtg
     2041 tgcacggctc gcacgtcgat cccggcagcg tggattcagc gttcggcacg agctgtttgt
     2101 agtactcggc cacggcgtcc atcggaaaca acggcgcgac gtgcggctgt tcggccgtcg
     2161 ctaggctgag ctccggatcg ccgggcgcgc cgtgcaggat cagcgtgccg gtcgtgatgt
     2221 ccgagccttg cggcaccagg tggccgaacc acgcggtcca cgcgccgctg tccgtgatgc
     2281 gctgcatgcc cggcagcagc gcagccgcgc cgcgcgcgtc gccggcttgg agccgcgctg
     2341 cggtctcgat cagcacggac tgatcgaagc cggatcgccc gcggcccgac tggtcgacga
     2401 cgtacgtcgc gatgccgcgg cgcacgaagt acggatacca gccctcgcgc ccatcgggag
     2461 tcgactcgag cgcggcgccg gtgtgagtcg agccgtgcac catgatcacg ggccagccgg
     2521 gcccggactt gcgcgcgggg atttggaact gcacgtacat ctggccgatc gtgatctgat
     2581 tcggcgtcgc gcgcggcggc ggctggccgg gtggcgcgaa cggcgtggac gcatactcgg
     2641 agattttggt cacgccgccg atgaagaagc tgccctggtc ctcgatcgtg acgg
//
LOCUS       DATCUD010000144         2626 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_22818, whole genome shotgun sequence.
ACCESSION   DATCUD010000144 DATCUD010000000
VERSION     DATCUD010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2626
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22818"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VIQ99_02060"
     CDS             complement(<1..555)
                     /locus_tag="VIQ99_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019237730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9181953.1"
                     /translation="MSSNYRAADIEVLSGLEPVRRRPGMYTDTSRPNHLAHEVVDNSV
                     DEAVAGHAKKIDVTLFADGSLQVADDGRGMPVDVHPEEKITGVELILTRLHAGGKFSN
                     KNYQFSGGLHGVGVSVVNALSKNLEVWIRRDGKEYNMSFVDGERRGKLDVVGKVAKNN
                     TGTTVRFWPNPKYFDSPQFSLPRLK"
     gene            complement(648..1229)
                     /locus_tag="VIQ99_02065"
     CDS             complement(648..1229)
                     /locus_tag="VIQ99_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018860674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3501 family protein"
                     /protein_id="HEY9181954.1"
                     /translation="MDKLTPADLLSLEQYHKERPRLRAEVLAHKRHRQAPLGPNITLY
                     FEDRLTMRYQVQEMLRTERIFESEAIAEELAAYNPLIPDGTNLKATMMLEYPDVAERR
                     AALERLRGIENAVYLEVGVLGRVFAYADEDLTRSDATKTAAVHFLRFELDAAMRAALK
                     GGAPLKLGVDHELYRHELDAGAELRASLAADLD"
     gene            complement(1240..2586)
                     /locus_tag="VIQ99_02070"
     CDS             complement(1240..2586)
                     /locus_tag="VIQ99_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002690949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HEY9181955.1"
                     /translation="MTDSKPPRREGSLEAPTRHAIDWRSPQFTDLGRLEAELTRVFDI
                     CHGCRRCFSLCHSFPTLFDAVDATTSGELHDVPKQAYWQVVEHCYLCDMCYMTKCPYV
                     PPHEWNVDFPHLMLRAKHKAFEDGKATMRDKILSSTDTVGSLAGIPVVAELVNVVNAS
                     SFGRKILEKTLGVDHEAPVPKYHSRTARKRLAERIGRTAAPKPAGETQGRVAVFATCY
                     GNRNHPGLVEDLVAVFEHNGIGVALLGTERCCGMPKLELGDLKSIERLKDENIDALDR
                     YARDGWDLSAVVPSCVLMFKQELPLLFPDDERVRRVAQAFYDPFEYLMLRHREGLLAT
                     EFKASLGKVTYQVPCHLRVQNIGLKTREVLQLVPDTTVQTIERCSGHDGTYGVKKEYA
                     AISRKIARPVARQVDSADAQHFTSDCPMAAEQIATVADGNIEPTHPIQLLRRAYGV"
BASE COUNT          423 a          858 c          857 g          488 t
ORIGIN      
        1 cttcaagcgc ggcagcgaga actgcggcga gtcgaagtac ttcggattcg gccagaaacg
       61 cacggtcgtg cccgtgttgt tcttcgcgac cttgccgacg acgtcgagct tgccgcgccg
      121 ctcgccgtcg acgaagctca tgttgtattc cttgccgtcg cgccggatcc acacttcgag
      181 gttcttcgac agtgcgttga cgaccgacac gccgacgccg tggagaccgc ccgagaactg
      241 gtagttcttg ttcgagaact tgccgcccgc atgcagcctc gtgaggatca gctcgacgcc
      301 agtgattttc tcctccgggt ggacgtcgac gggcatgccg cggccgtcgt cggccacctg
      361 caacgacccg tcggcaaaca gtgttacatc gatcttcttg gcgtgacctg cgacggcctc
      421 gtcgacgctg ttgtcgacga cctcgtgcgc gaggtgattc gggcgactcg tgtccgtgta
      481 catgccggga cgccggcgca cgggctcgag accgctcagg acttcgatgt cggcagcgcg
      541 atagttgcta ctcattgatc cggcctaaca ctcgagcaca agacccgagt tcccacgtag
      601 gccggcgcga ttgtagcgcg tccgagcagg tccgcgacaa gcggtgatca gtcgagatcc
      661 gctgccagcg aagcgcgcag ctcggcgccc gcgtcgagct cgtggcgata gagctcgtga
      721 tcgacgccga gcttcaacgg tgcgccgccc ttcaaggccg cgcgcatggc cgcgtcgagc
      781 tcgaaccgca ggaaatgcac ggccgcggtc ttggtcgcgt cgctgcgcgt aaggtcctcg
      841 tcggcgtacg cgaacacgcg ccccagcact cctacctcga ggtacacggc gttctcgatg
      901 ccgcgcaagc gctcgagagc ggcgcggcgt tccgcgacgt cggggtactc gagcatcatc
      961 gtggccttga ggttcgtgcc gtcgggaatc agcgggttgt acgccgccag ctcctcggcg
     1021 atggcctccg actcgaagat acgctcggtg cgcagcatct cctgaacctg ataccgcatc
     1081 gtgaggcggt cctcgaaata cagcgtgata ttcggcccga gcggcgcctg ccggtggcgc
     1141 ttgtgggcca gcacctccgc gcgcaagcgc ggccgctcct tgtggtactg ctctagcgag
     1201 aggaggtcgg ccggcgtgag cttgtccata agccttgcgt cagaccccgt aggcgcggcg
     1261 cagcaactgg atcggatgcg tgggctcgat gttgccgtcg gcgaccgtcg cgatctgctc
     1321 ggcagccatc gggcagtcgc tcgtgaaatg ttgcgcgtcc gcgctgtcga cctggcgcgc
     1381 caccgggcgc gcgatcttgc gcgagatcgc ggcatattcc tttttcacgc cataggtgcc
     1441 gtcgtgcccc gagcagcgct cgatcgtctg cactgtcgtg tcgggaacga gttgcagcac
     1501 ttcgcgcgtc ttcaagccga tgttctgcac gcgcaggtgg cacggaacct ggtaggtaac
     1561 cttgccgagg ctcgccttga actcggtcgc gagcaaccct tcgcggtgac gcagcatcag
     1621 gtattcgaac ggatcgtaga aggcttgcgc cacacgccgc acgcgctcgt cgtcggggaa
     1681 caatagcggc agctcttgct tgaacatcag cacgcacgaa ggcacgaccg cgctcaagtc
     1741 ccaaccgtcg cgagcatacc ggtcgagcgc gtcgatgttt tcgtccttga gccgctcgat
     1801 cgacttcaag tcgccgagct cgagcttcgg catgccgcag caacgctcgg tgccgagcaa
     1861 cgcgacgccg atgccgttgt gctcgaagac cgcgacgagg tcctcgacga ggcccggatg
     1921 attgcggttg ccgtaacagg tcgcgaacac ggcgacgcgg ccctgcgttt cgccggccgg
     1981 cttcggcgcc gccgtgcggc cgatgcgctc ggccaaccgc ttgcgggccg tgcgcgagtg
     2041 atatttcggc acgggtgcct cgtgatccac gccgagtgtc ttctcgagaa tcttgcgccc
     2101 gaagctcgac gcattgacca cgttcacgag ctcggcgacg accggaatcc ccgcaaggct
     2161 gccgaccgtg tcggtcgagc tcaggatctt gtcgcgcatc gtggccttgc cgtcctcgaa
     2221 cgccttgtgc ttcgcccgca gcatcagatg cgggaagtcg acgttccact cgtgcggcgg
     2281 cacgtatggg cacttcgtca tgtagcacat gtcgcagaga tagcagtgct cgacgacctg
     2341 ccagtaagcc tgcttcggca cgtcgtggag ctcgccgctc gtcgtcgcgt cgacggcatc
     2401 gaacagcgta gggaacgaat ggcagaggct gaagcagcgt cgacacccgt ggcagatgtc
     2461 gaacacgcgc gtaagctcgg cttcgagccg gcccaagtcg gtgaactgcg gcgatcgcca
     2521 atcgatcgca tggcgtgtgg gcgcctcgag gctaccttcg cggcgcggcg gtttgctgtc
     2581 cgtcacggcg tgctgcttgg ctcgggcgcg gcccggacct tcgagg
//
LOCUS       DATCUD010000145         1720 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44002, whole genome shotgun sequence.
ACCESSION   DATCUD010000145 DATCUD010000000
VERSION     DATCUD010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44002"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /gene="tsaA"
                     /locus_tag="VIQ99_02075"
     CDS             complement(<1..501)
                     /gene="tsaA"
                     /locus_tag="VIQ99_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEY9181956.1"
                     /translation="MKSIEDVSSAEGLANQVRTVTLEPIGYVSAPLATKVEAARQPRA
                     AAGVPARIELVPGRNFEHALVDLDAWTHIWVLFWFDRNAGWRPKVLPPRSLTGRKGVF
                     ATRSPHRPNPLGMSAVRLERVEGLTLHVRDVDMLDGTPVLDIKPYIAYTDAIGDAGKG
                     WLANEAT"
     gene            687..>1720
                     /locus_tag="VIQ99_02080"
     CDS             687..>1720
                     /locus_tag="VIQ99_02080"
                     /inference="COORDINATES: protein motif:HMM:NF025006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY9181957.1"
                     /translation="MNRRTFVRCTAFRQLSALLLLSLSIGAAAQQPALTGRVTSSAEG
                     PMEGVLVRAHREGSNKTVTVVTRADGSYSFPRERLEPGPYTVSVRAVKYVLPARHESV
                     DITANAAAQLDLALRDADSLELALQMTDPEWFGSFPLDDRTKWELFRDCSRCHTMRRP
                     SMSTYDAEELAWVMMRMVYSAGSSPMRFQLPANATPHWGRAEGGEPSGQQRRQAEAIA
                     SINLRQGSWSYELKTLPRPTGKETEVIYTTWDLPATARPHDTRIAADGSIWFNHFNDN
                     AIGRLDPKTGQVKEWRWPYRAREGSFAPTGARTLMGPDARGRWYIGNQAQSGVVVFDP
                     ATEQFEFHDPP"
BASE COUNT          285 a          578 c          573 g          284 t
ORIGIN      
        1 tgtcgcctcg ttcgcgagcc agcccttccc cgcgtcgccg atcgcgtccg tgtaagcgat
       61 gtacggcttg atgtcgagca ccggcgtgcc gtcgagcatg tcgacatcgc gcacgtgcag
      121 cgtgagacct tcgacgcgct cgaggcgcac ggcggacatt ccgagcgggt tcggtcgatg
      181 cggcgaacgc gtcgcaaaca cgcccttgcg gcccgtgagg ctgcgcggcg gtaacacttt
      241 gggacgccaa ccggcgttgc ggtcgaacca gaacaacacc cagatgtgcg tccaggcgtc
      301 gaggtcgacg agtgcgtgct cgaagttccg gccgggcacg agctcgatcc gcgccgggac
      361 gcccgcggcg gcgcgcggct gacgcgcagc ttcgaccttc gtggcgagcg gcgcgctgac
      421 gtaaccgatc ggctcgagcg tcacagtgcg aacctggtta gccaacccct cggcgctcga
      481 gacatcctcg atggacttca actatgggct ccgttcacgg cactcatcgc gagacgactc
      541 tacacgacgc attctccggg ggctcggaag agcctccgcg gagggccacc taaggcttca
      601 cttgaagttc gttcagtctc tctcgctggc gctacggagt tgccgctaca ctgtgatcgc
      661 cacgtcgagt cgtcccgggg gagctcatga atcgtcgcac tttcgttcgc tgtacggcgt
      721 ttcgccagct gtccgcgttg ctgttgctgt cgttgtcgat cggcgccgcc gcacagcagc
      781 ccgcgctgac gggccgcgtg acttcgtcgg ccgaggggcc gatggaagga gtgctcgtgc
      841 gcgcacaccg cgaaggctcg aacaagaccg tcacggtcgt gacgcgcgcc gacggcagct
      901 attcattccc gcgcgagcgg ctcgagccag ggccctacac cgtttcggtg cgtgcagtga
      961 agtacgtctt accggcgcgc catgagagcg tagacatcac agcaaatgcg gccgcacagc
     1021 tcgatctcgc gctgcgcgat gccgactcgc tcgagctcgc gttgcagatg accgaccccg
     1081 agtggttcgg gagcttcccg ctcgacgatc ggaccaagtg ggagctgttc cgcgattgca
     1141 gccgttgcca cacgatgcgc cgtccgtcga tgtcgaccta cgacgccgag gagctcgcgt
     1201 gggtcatgat gcggatggtg tactcggcgg gcagctcgcc gatgcggttt cagctgccgg
     1261 cgaacgcgac gccccactgg ggccgcgccg agggcggcga gccttcgggt cagcagcgcc
     1321 gccaggccga ggccatcgcc tcgatcaacc tgcgccaggg ctcgtggagc tacgagctca
     1381 agacgttgcc gcggccgaca ggcaaagaga ccgaggtcat ctatacgacc tgggatctcc
     1441 ccgcgacggc gcggccgcac gacacgcgga tcgcggccga cggctcgatc tggttcaacc
     1501 atttcaacga caacgcaatc ggacggctcg atcccaagac gggccaggtc aaggaatggc
     1561 gctggcccta tcgcgcgaga gaaggctcgt tcgcgccgac cggtgcgcgc acgctgatgg
     1621 gacccgacgc gcgcggccgc tggtacatcg gcaatcaggc gcagagcggc gtcgtcgtgt
     1681 tcgatccggc caccgagcag ttcgagttcc acgacccgcc
//
LOCUS       DATCUD010000146         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37021, whole genome shotgun sequence.
ACCESSION   DATCUD010000146 DATCUD010000000
VERSION     DATCUD010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37021"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1997
                     /locus_tag="VIQ99_02085"
     CDS             <1..>1997
                     /locus_tag="VIQ99_02085"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY9181958.1"
                     /translation="VMADGVAATSVVDKAEALYREAAGRCVAGIAGEDAAHAANLHTL
                     LRDVGNDCEQLEKLLAALLPRREQWLRVLADGTPALRPALEKALQRLVDDELATVAEL
                     CEEPMLAALAPLLKHAAGAASGALHDALAPWLALDRPPRSGPLALAAWRGVAALLLTK
                     QGEWRKRVAKPEGFGPDHAELRERLLALLDTLHGREPLRAALETVGSLPEARYTDQQW
                     QSLAALRAVLVRLAAELKVTFAERRMVDFVELALAAQRALGQADAPSDLLLALDRRIQ
                     HLLVDEFQDTSQSQRRLLELLTAGWQPDDGRTLFLVGDPMQSIYRFRDADMSLFLLAK
                     RHGIGTVRLQSLTLQRNFRSAPAIVEWVNSAFAAVFPAEDHIESGVTAFRASNATRAV
                     ADEQFVRAHPVVGAPGAEAACVTAILERERRRAPEQSIAVLVQNRRHLEGLREQLRAR
                     GIAAHAVEIDSLGDHSVAQDLVGLTRALLHLHDRIAWLAVLRAPWCGLCWADLNALCG
                     DDSESAIWDLLQRPERISRLGADGQARVQSFAAAVEHAFEMRGHTTLSSWIERTWIEL
                     DGPACLDDEAERSSAEQFFALLGGAETGGDLDDPALLQAALDTVQQQADAPRERGVEI
                     MTMHRAKGLEFDTVVLLGLAREPRPDEPKALQWLARATADG"
BASE COUNT          309 a          668 c          707 g          313 t
ORIGIN      
        1 ggtgatggcg gacggcgtcg cagccacgtc cgtcgtcgac aaggccgagg ccctctaccg
       61 tgaagcggcc ggccgctgcg tggcaggcat cgcgggcgaa gacgcggccc atgccgcgaa
      121 cctgcacacg ttgttgcgcg acgtcggcaa cgattgcgag caactagaaa agcttctcgc
      181 ggcgctactg cctcgtcgcg agcagtggct gcgcgtgctc gccgacggca cgcccgcgct
      241 gcgtccggcg ctcgagaaag cgctgcagag actcgtcgac gacgagctcg cgacggtcgc
      301 cgaattgtgc gaggaaccca tgctcgccgc gttggcgccg ctgctgaagc acgcggccgg
      361 cgctgcgagc ggcgcgctgc acgatgcgct ggctccctgg ctcgcgctcg accgtccgcc
      421 gcggtcggga ccgttggctc tcgcggcgtg gcgcggcgtc gcggcgctgc tgctgacgaa
      481 gcaaggcgag tggcgcaaac gcgtagcgaa acccgaaggc ttcgggcccg atcacgccga
      541 gctgcgcgag cggttgcttg cgctgctcga cacgttgcac ggacgcgagc cgctgcgcgc
      601 cgctctcgag acagtcggct cgctgccgga ggcgcgctac acggaccaac aatggcagag
      661 cttggccgcg ttgcgcgcgg ttctcgtgcg gcttgccgcc gagctcaaag tcacattcgc
      721 ggagcggcgc atggtcgatt tcgtggagct cgcgctcgcg gcacagcgcg cgctcgggca
      781 ggccgatgcg ccgtcggatc tgctactcgc gctcgatcgg cgtatccagc atctgctcgt
      841 cgacgagttc caggacacgt cgcagtccca gcgacgcctg ctcgagctgc tgaccgcggg
      901 ctggcaaccc gacgacggtc gcacgctatt cctcgtcggc gacccgatgc agtctatcta
      961 tcggttccgc gatgccgaca tgtcgctgtt cctgctcgcg aagcggcacg gcatcggcac
     1021 ggtacggctg cagagcctca cactgcagag gaatttccgc agcgctccgg cgatcgtcga
     1081 gtgggtgaac tcggcgttcg cagcagtctt tcccgcggag gaccatatcg agtccggcgt
     1141 cacggccttt cgtgccagca acgcgacgcg ggcggtcgcg gacgagcaat tcgttcgcgc
     1201 acacccggtc gtcggcgctc cgggtgccga agcagcctgc gtgacggcga ttctcgagcg
     1261 agaacgacgc cgcgcaccgg agcaatcgat cgccgtgctg gtacagaatc gccggcatct
     1321 cgagggcctg cgagagcagc tccgcgcacg cgggatcgcg gcacatgccg tggagatcga
     1381 cagcttgggc gatcactcgg tagcacagga tctcgtgggc ctgacgcgcg cgttgctgca
     1441 tctccacgat cgcatcgcgt ggctggcggt gctgcgagcc ccttggtgcg gtctctgctg
     1501 ggcggacctg aacgcactct gcggcgacga ttcggagtcc gcgatctggg acttattgca
     1561 gcgcccggag cgcatctcgc gactcggcgc ggatggccaa gcgcgtgtcc agagcttcgc
     1621 cgcggctgtc gagcacgcgt tcgaaatgcg ggggcacacg acgttgagca gctggatcga
     1681 gcgaacctgg atcgagctcg acggacccgc gtgcctcgac gacgaggcgg aacgttcgtc
     1741 ggccgagcag ttcttcgcgc tgctgggcgg agccgagacc ggcggcgatc tcgacgaccc
     1801 tgcgttgctc caagcggcgc tggacaccgt gcaacagcag gccgatgcgc cgcgggagcg
     1861 gggtgtcgag atcatgacga tgcatcgagc caaaggcctc gaattcgata ccgtggtgtt
     1921 gctcggcctc gcgcgcgagc cgcggcccga cgaaccgaag gcgctgcagt ggctcgcacg
     1981 ggcgacggcc gacggcg
//
LOCUS       DATCUD010000147         3460 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37024, whole genome shotgun sequence.
ACCESSION   DATCUD010000147 DATCUD010000000
VERSION     DATCUD010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3460
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37024"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..516
                     /gene="rpsO"
                     /locus_tag="VIQ99_02090"
     CDS             247..516
                     /gene="rpsO"
                     /locus_tag="VIQ99_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006786782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEY9181959.1"
                     /translation="MTLKSPQKSEIITQYGRNPTDTGSPEVQVALLSARINQLSEHFA
                     GHEKDHHSRRGLLKMVNQRRKLLDYLKQKDQARYEDLIGRLGLRR"
     gene            641..2722
                     /gene="pnp"
                     /locus_tag="VIQ99_02095"
     CDS             641..2722
                     /gene="pnp"
                     /locus_tag="VIQ99_02095"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018872387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY9181960.1"
                     /translation="MKASRTFKYGAHDVTIETGAIARQADGAVLVNMADTVVLVTAVG
                     DKKDVEGRDFFPLTVNYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFP
                     EGFRRDVQVIATVLSMNTEVDPDIPSLLGASAALALSGLPFMGPIGAARVGYKDGQYL
                     LNPTSVELQQSKLDLVVAGTQDAVLMVESEADRLSEEIMLGAVMFGHQQMQVAIEAIR
                     SLAKEAGRPPVAWTAPPEDKALAQGIAKFLPAITDAYGIAEKQVRYAKIGELKKQCVA
                     ELTAREGNTWTPAQIEAAFHDAEYKVVRGRIIEGKPRIDGRDTKTVRKIDVQVGVLPR
                     THGSAVFTRGETQALVVTTLGTGRDAQIIDALEGERREPFMLHYNFPPYSVGETGFIG
                     SPKRREIGHGRLARRGVEAVMPDMETFPYVVRVVSEITESNGSSSMASVCGTSLSLMD
                     AGVPTKAPVAGVAMGLIKEDKAFVVLTDILGDEDHLGDMDFKVAGTADGVTALQMDIK
                     IFGITREIMAAALAQAREGRLHILGEMNKIISKPREKMSDWAPTIITIKIDPEKIRDV
                     IGKGGAVIRAITEETGTTIDIENDGTVKIASVDGKAGRAALERIELITADVEVGRVYQ
                     GKVVRLMDFGAFVTILPGRDGLVHISQISHERVERVSDKLKEGDVVRVKVLEVDRQGR
                     VRLSMRDVDSN"
     gene            complement(2719..>3460)
                     /locus_tag="VIQ99_02100"
     CDS             complement(2719..>3460)
                     /locus_tag="VIQ99_02100"
                     /inference="COORDINATES: protein motif:HMM:NF012951.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEY9181961.1"
                     /translation="PREVAGAADRILRVLEAFDLEWDRSVLYQSSRLAQYEHEAQRLL
                     AAGAAFRCRCTRSEIRAQEGPTARYPGTCRQRSVPPDDAAIRVRVEPGTVTVSDGLQG
                     TSEVDLAAVTGDYVIIRRDGLPAYHLAVVLDDAAQGVTTVVRGVDLLDSTATHIHLQR
                     ILALPTPRYYHLPVIVNELKQKLSKQTGASPVDAAQPGAAARVLELLGLPVPVELAGE
                     RPRALWRWALERWSLERLRGRRELPEKP"
BASE COUNT          664 a         1086 c         1126 g          584 t
ORIGIN      
        1 cccggctcgc ggcagggcag ccagtcccgg cggagccgca cctgcccgta ggccccgtca
       61 aggtcgaagc gcagtcgggg cagctgatcg cgatagccca agtgaccgcc gacgggcaac
      121 tcgcgcctac ccgcgtgttc actcgttaac ttgttggagc ggcacgttta tttcggtatg
      181 atgcgcgcct tccaaagtag gtcgaacaca atagctgctg aatagggcag ccccagaggt
      241 tgttgaatga cgctcaaatc gccacagaaa tccgagatca tcacccagta cggtcgtaac
      301 ccgaccgaca ccgggtcgcc ggaggtgcag gtcgctttgc tctcggctcg gatcaatcag
      361 ctctcggagc atttcgcggg tcacgagaag gatcatcact cgcgtcgcgg tctgcttaag
      421 atggtgaacc aacgccgcaa gctgttggat tatctgaagc agaaggatca ggctcgctac
      481 gaagacctga tcggccgcct cggtctgagg cgttagactt tttcccacgc agagccggtt
      541 ccgccggctc tactcgtttt ggagcgacct cccacgcgcg gccccaagga tctccggaag
      601 cggagctcac tgccgcccaa tttcgtcaag gacaacaaac gtgaaagcca gcagaacctt
      661 caaatacggt gcgcacgacg tcaccatcga aaccggcgcc atcgcccgtc aggccgacgg
      721 agccgtcctc gtcaacatgg ccgacaccgt ggtgctcgtc accgcggtcg gcgacaagaa
      781 ggacgtcgaa gggcgtgact tcttccctct taccgtcaac taccaagaga agacctacgc
      841 agccggccga atccccggcg gctttttcaa gcgcgaaggc cggccaagcg agaaagagac
      901 gctgacctcg cgcctgatcg atcggccgat ccgcccattg ttcccggaag gcttccgtcg
      961 cgacgtgcag gtcatcgcga ccgtgctgtc gatgaatacc gaggtggatc cggacattcc
     1021 gtcgctactc ggcgcttcgg cggcgctcgc gttgtcgggc ctgccattca tggggccgat
     1081 cggcgccgct cgggtcggct acaaggacgg ccagtatctg ctaaacccga cgagcgtcga
     1141 gttgcagcaa tcgaagctcg atctcgtcgt cgccggcacg caggacgccg tgttgatggt
     1201 ggaatccgag gccgaccggc tctcggaaga gatcatgctg ggcgccgtga tgttcggcca
     1261 ccaacagatg caggtcgcga tcgaggcgat ccgctcgctc gcgaaggaag ccggccgtcc
     1321 gcccgtcgct tggaccgcgc cgcccgaaga caaggctttg gcacagggca ttgccaagtt
     1381 cctccccgcg atcaccgatg cctacggtat cgccgagaag caagttcgct acgccaagat
     1441 cggcgagctc aagaagcagt gcgtcgccga gctgaccgcg cgtgaaggca acacgtggac
     1501 gccggcgcag atagaagctg cattccacga cgccgagtac aaggtcgtgc gtggccgaat
     1561 tatcgaaggt aagccgcgca tcgacggtcg cgatacgaag acggttcgca agatcgacgt
     1621 ccaggtcggc gtgctccccc gcacgcacgg ttccgccgtg ttcactcgcg gcgagacgca
     1681 agctctggtg gtcacgacct tgggcacggg ccgggacgcc cagatcatcg acgcgctcga
     1741 aggggagcga cgcgaaccgt tcatgcttca ctacaacttc ccgccgtata gcgttggtga
     1801 gacagggttt atcggttcgc cgaaacgtcg cgagatcggc cacggacggc tcgcgcgtcg
     1861 tggcgtcgag gccgtcatgc cggacatgga gacgttccca tacgtcgtgc gtgtcgtctc
     1921 cgagatcacg gaatcgaacg gttcgagctc gatggcgagc gtgtgcggca cgagcttgtc
     1981 gttgatggat gcgggcgttc cgaccaaggc cccggtggcc ggcgtggcga tgggcttgat
     2041 caaagaagac aaggccttcg tcgtgctcac ggacatcctc ggcgacgagg accacctcgg
     2101 cgacatggac ttcaaggttg ccgggaccgc ggacggcgtc acggccctgc agatggacat
     2161 taaaatcttc ggcattacgc gcgagatcat ggccgccgcg ctggcacaag cccgtgaggg
     2221 tcgcctgcac attctcggcg agatgaacaa gatcatcagc aagccgcgcg agaagatgtc
     2281 ggactgggcg ccgacgatca tcacgatcaa gatcgacccg gagaagatcc gcgacgtcat
     2341 tggcaagggt ggcgccgtaa tccgcgcgat cacggaggaa acgggcacca cgatcgatat
     2401 cgagaacgac ggtaccgtga agatcgcttc ggttgacggc aaggcgggcc gagcggcgct
     2461 cgagcgcatc gagctgatca cggccgacgt cgaggtcggt cgcgtgtacc aaggcaaggt
     2521 cgtccgcctc atggacttcg gcgcattcgt tacgatcttg ccgggccgcg atggtctcgt
     2581 gcatatctcg cagatctcgc acgagcgagt cgagcgcgtc agcgacaagc tcaaggaagg
     2641 cgacgtcgtt cgcgtgaaag tgctcgaagt cgaccgtcag ggccgcgttc gcttgagcat
     2701 gcgcgacgtg gactcgaact agggtttttc cggcagctcg cgacggccgc gaaggcgctc
     2761 gaggctccaa cgctcgagcg cccagcgcca tagcgcgcgc ggtcgttccc ccgcgagctc
     2821 cacgggcacg ggcagaccca agagctcgag caccctcgct gcggcgcccg gttgcgccgc
     2881 atcgacgggg ctggcgccag tctgtttcga gagcttctgc ttgagctcgt tgacgatcac
     2941 cggcaagtgg tagtagcgcg gagtcgggag cgcgagaatg cgctgcagat ggatgtgggt
     3001 cgccgtggag tcgagaaggt ccacgccgcg gacgacggtc gtgacgccct gtgccgcgtc
     3061 gtcgagcact acggccagat gataggccgg taacccgtcg cgccggatga tcacgtaatc
     3121 gcccgtcacg gcggccaggt cgacttcgct cgtgccttgc agcccgtcgc tgacggtaac
     3181 ggtgccgggt tcgacacgga cgcggatcgc cgcgtcatcc ggcggcaccg aacgttgacg
     3241 gcacgtgccg gggtaacggg ccgtaggacc ttcctgcgcc ctgatctcgc tgcgcgtgca
     3301 ccggcaacga aacgcggccc cggcggccag aaggcgttgg gcttcatgct cgtattgcgc
     3361 gagacgggag ctttggtaca gcacgctgcg atcccattcg agatcgaagg cctcgagcac
     3421 gcgcaggatg cgatctgcgg cgccggcgac ctcgcgtggt
//
LOCUS       DATCUD010000148         2004 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58212, whole genome shotgun sequence.
ACCESSION   DATCUD010000148 DATCUD010000000
VERSION     DATCUD010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2004
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58212"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..477)
                     /locus_tag="VIQ99_02105"
                     /pseudo
     CDS             complement(94..477)
                     /locus_tag="VIQ99_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813878.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
     gene            complement(487..1866)
                     /gene="atpD"
                     /locus_tag="VIQ99_02110"
     CDS             complement(487..1866)
                     /gene="atpD"
                     /locus_tag="VIQ99_02110"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY9181962.1"
                     /translation="MSNGTIVQVIGAVVDVEFPRDAIPKVYDALRLQDRSLTLEVQQQ
                     LGDGVVRTIAMGTSEGLRRGLAVSNTGKAISVPVGPKVLGRIMNVLGEPIDDAGSIDA
                     KETWPIHREPPSYEEQSGSTELLETGIKVIDLIMPIAKGGKVGLFGGAGVGKTVTLLE
                     LINNIAKEHGGTSVFAGVGERTREGNDFYHDMKEAGVLDKVALVFGQMNEPPGNRLRV
                     ALTGLTMAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGV
                     LQERITSTKTGSITSFQAIYVPADDLTDPSPATTFAHLDATLVLSRKIAELGIYPAVD
                     PLDSTSRLLDPNVIGQEHYDAARATQAVLQRFKELQDIIAILGMDELSEDDKLIVQRA
                     RKIRNFLSQPFSVAQAFTGQEGKYVPLKETIRSFKAIVAGEYDHLPEQAFYMVGGIEE
                     AVEKAKKVQ"
BASE COUNT          298 a          668 c          666 g          372 t
ORIGIN      
        1 cagcagacgt accaaaagct gcgcggcccc gccggcaggt cgcacgtgga gggcagtctg
       61 accggcgacc gcgtcgggtt cgagctcgtg cgcggcgcga tagcgcgcct cggcctcgac
      121 gagctcggcc tgcgcccgcg cgagatcgac ctggccgtgc ttgccttcga ggacctcgcg
      181 agcgcgctcg cgcgcggcca aggcctcggc ttcgtcgagc tgctcggcgt gcaaggcgct
      241 gtcggcgagc acggtgacca agtgaggctg gatctcgagg atgccgcccg tcacgtagaa
      301 caatttctcg ccctcgccgg tctgcacgcg cacggagccc ggcttcagcg tggtcagcag
      361 cggcgcgtgc cgcggtgcga cgccgatctc gccggccttc gccggcgcga acaccatgtc
      421 ggcgtcgccc tcgaagatcg cgccttcggc gctgacgatg ttgacgtgaa tagccacgcg
      481 tttgccttac tgaaccttct tggctttctc gacggcctct tcgatgccgc cgaccatgta
      541 gaacgcctgc tcgggcaggt ggtcgtactc gccggcgacg atcgccttga agctgcggat
      601 cgtctccttc agcggcacgt acttgccctc ttgccccgtg aacgcctgcg cgaccgagaa
      661 cggctgcgac aggaagttcc ggatctttct ggcgcgctgc acgatgagct tgtcgtcttc
      721 cgagagctcg tccatgccga gaatcgcgat gatgtcctgc agctccttga agcgctgcaa
      781 caccgcctgc gtcgcgcgcg cggcgtcgta gtgctcctgg ccgatcacgt tcgggtcgag
      841 caaccggctc gtcgagtcga gcgggtcgac ggcgggatag atgccgagct cggcgatctt
      901 gcgcgagagc acgagcgtcg cgtccaggtg cgcgaacgtc gtggccggcg acgggtcggt
      961 caagtcgtcg gccgggacgt aaatggcctg gaacgacgtg atcgagccgg tcttcgtcga
     1021 cgtgatgcgc tcttgcagca cgcccatctc ctcggcgagc gtcggctggt aaccgaccgc
     1081 gctcggcatg cggccgagca gcgccgacac ctcggtgccc gcgagcgtgt agcgatagat
     1141 gttgtcgatg aacagcaaca cgtcgcggcc ttcgtcgcgg aagctctcgg ccatggtgag
     1201 gccggtgagc gcgacgcgca gccggttgcc cggcggctcg ttcatctggc cgaacacgag
     1261 cgcgaccttg tcgagcacgc cggcttcctt catgtcgtgg tagaagtcgt tgccctcgcg
     1321 tgtgcgctcg ccgacgcccg cgaacacgga ggtcccgccg tgctctttcg cgatgttgtt
     1381 gatgagctcg agcagcgtga cggtcttgcc gacgccggcg ccgccgaaca atccgacctt
     1441 accgcccttc gcgatcggca tgatgaggtc gatgaccttg atgccggtct cgagcagctc
     1501 ggtcgatccc gattgctctt cgtacgacgg cggttcgcga tggatcggcc acgtctcctt
     1561 cgcgtcgatg gagcccgcat cgtcgatcgg ctcgccgagc acgttcatga tgcggcccag
     1621 caccttcggg ccgacgggca ccgagatcgc cttgccggtg ttcgacaccg ccagaccgcg
     1681 gcgcaagcct tccgacgtgc ccatcgcgat cgtgcgcacg acgccgtcgc cgagctgctg
     1741 ctgcacctcg agcgtgaggc tgcggtcttg cagcctgagt gcgtcgtaaa ccttggggat
     1801 cgcgtcgcgc ggaaactcca cgtcgacgac cgcgccgatg acctgaacga tcgtgccgtt
     1861 gctcattttc tcttcctatt gatcaatcca tgcggtgcgg gtgacggccg atgggcatgt
     1921 gtgtgagagg ccacttccag gacgctcgcg cacatggatg tgcgcgcgcg agcctacagg
     1981 gacgtattca cggcgttcct ggaa
//
LOCUS       DATCUD010000149         1904 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65458, whole genome shotgun sequence.
ACCESSION   DATCUD010000149 DATCUD010000000
VERSION     DATCUD010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1904)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1904)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1904
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65458"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VIQ99_02115"
     CDS             <1..987
                     /locus_tag="VIQ99_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011396452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181963.1"
                     /translation="QNTDSGGNSMAPAMMINPEFRPTKIDRPSDVTGLVGTSDRPRRL
                     AHEDEVAITEAIYRISKRKMDNNVSTGLPPTRDQVVEELVKCGYLDAAYTKEAFGNVV
                     LNPAADTDIVSDTGGIFTTAEFNAGGTDGNEFRKTASVMKMVIDGYAGAGCITMGGYD
                     YHGGMRQEGEVKDFRAGRCMGAVLAYAMRRQKPVMLYVFSDGALSSNGVIDNTVNGRG
                     KGEWTSDNQDTASPFFLVYNPPAFGGRPQLLTSQGLTAAQHQQLGAFSADGNVVRSGT
                     PGANNVNLLVHMILLNYMALNGDQGQFTTVFPNHGLGDPALLDRFIAFAPIA"
     gene            1174..>1904
                     /locus_tag="VIQ99_02120"
     CDS             1174..>1904
                     /locus_tag="VIQ99_02120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181964.1"
                     /translation="MSTVDDLRDLIACPRCDRPLESAGVAWRCAGCRVDFAPVGDIPW
                     LFAEPNAALGEWRGRLHFSLQRIERERLELETALAAPELRPATRARIEALQRATADQA
                     ARLRSLLAPLEIERHSAPVEAYLALRTRLPPDQGLTTYYPNIHRDWCWGDAENDASFD
                     LLEHALRAAAPGRALVLGAGAGRLAYDFHQRTAASVTVALDFNPLLALVAKRVSAGER
                     VELYEFPLAPRNPLEHAVLRTLAAPA"
BASE COUNT          329 a          651 c          619 g          305 t
ORIGIN      
        1 cagaacacgg actcgggcgg caactcgatg gcgccggcca tgatgatcaa cccggagttc
       61 cggccgacga agatcgatcg gccgagcgac gtgacgggcc tcgtcggcac gagcgaccgg
      121 cctaggcggc tcgcgcacga ggacgaagtc gccatcacgg aagcgatcta tcggatcagc
      181 aagcggaaga tggacaacaa tgtgtccacg ggcctgccgc ccacgcgcga ccaggtcgtc
      241 gaagagctcg tgaagtgcgg ttacctcgac gccgcctaca ccaaagaagc gttcggcaac
      301 gtggtgctga acccggccgc ggacacggac atcgtcagcg acaccggcgg cattttcacg
      361 accgcggagt tcaacgcggg cggcaccgac ggcaacgagt tccgcaagac ggcctcggtc
      421 atgaagatgg taatcgacgg ctacgcgggc gccggctgca tcacgatggg cggctacgat
      481 taccacggcg gcatgcgcca ggaaggcgag gtcaaggact tccgcgcggg gcgctgcatg
      541 ggcgcggtcc tcgcgtacgc aatgcgcagg cagaagcccg tgatgctata cgtgttcagc
      601 gacggcgcgt tgtcgagcaa cggtgtgatc gacaacacgg tcaacggccg gggcaagggc
      661 gagtggacca gcgacaacca ggacacggcg tcgccgttct tcctcgtcta caacccaccc
      721 gcgttcggcg gccgcccgca gctgctcaca tcacaaggcc tgacggccgc gcaacaccag
      781 cagctcggcg ccttctcggc ggacggcaac gtcgtacgct ccggcacgcc cggtgcgaac
      841 aacgtcaacc tgctcgtcca catgattctc ttgaactaca tggcgctgaa cggcgatcag
      901 ggccagttca cgacggtgtt cccgaaccac ggtctcggcg acccggcgct tctcgaccgg
      961 tttatcgcgt tcgctcctat cgcctgacgg gaacgagctc gagcggcaca gcaacggagt
     1021 ttttcggctc ttcaagcggg tctcatacgg ttactcggcc acggacggcc gagtaaccgt
     1081 ttctttttct gcgggccggt ttcacataac gtgatccgtg cacgggccgc catggctatt
     1141 cgcgaccacg atgagcgctt tcgagcactt cgcatgagca ccgtcgacga tctccgcgat
     1201 ctcatcgcct gcccgcgctg cgaccggccg ctcgagagcg ccggcgttgc gtggcgctgc
     1261 gccgggtgcc gcgtcgattt tgcgccggtc ggcgacattc cgtggctgtt cgccgagccg
     1321 aacgccgcac tcggcgagtg gcgcggccgc ttgcacttct cgctgcagcg gatcgagcgc
     1381 gagcgcctcg agctcgagac cgcgctcgcg gcgccggagt tgcggccggc gactcgcgca
     1441 cgaatcgaag ctctgcaacg cgcgacggcg gatcaagccg cacgactgag gtcgttgctc
     1501 gcgccgctcg aaatcgagcg gcactcggcc ccggtcgagg cttatctcgc gctgcggact
     1561 cggctgccgc cggaccaagg cctcacgacc tattatccga acatccatcg cgactggtgc
     1621 tggggggatg ccgagaacga tgcgtcgttc gacctcctcg agcacgcgct ccgcgccgcg
     1681 gcaccgggac gcgcgctggt gctcggtgcc ggcgccggcc ggctcgcata cgattttcat
     1741 cagcgcacgg ccgcgagcgt caccgtcgcg ctcgatttca atccgttgct ggccctcgtc
     1801 gcgaagcgcg tctccgcggg cgagcgggtc gagctctacg aatttccact cgcgccgcga
     1861 aatccgctcg agcatgcggt tctgcgcacg ctcgccgcac cggc
//
LOCUS       DATCUD010000150         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1591, whole genome shotgun sequence.
ACCESSION   DATCUD010000150 DATCUD010000000
VERSION     DATCUD010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1591"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..410
                     /locus_tag="VIQ99_02125"
     CDS             <1..410
                     /locus_tag="VIQ99_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009620067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HEY9181965.1"
                     /translation="GLNIDIAAAVTSAITGPIQIISVQVENIDFSEAYEQSVEQRMLA
                     QVEIQRREQNLRTTEVEAQIARTRAEGEAEAIRLRGEAEAAAIRARADALRANADLVQ
                     LQAVEKWDGKLPTTMVPSTALPFIDLQPARPTN"
     gene            499..1431
                     /locus_tag="VIQ99_02130"
     CDS             499..1431
                     /locus_tag="VIQ99_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9181966.1"
                     /translation="MLTRRDCLRFTAQAGAALALPLPLLAQGAVLTRPVPKTGEQLPI
                     IGLGSSATFSQAAGAADMEAIRSVFTAMLDNGGTVFDTAPGYGESEEVAAKAVNEIGA
                     RDRVFWATKLNVAGRGASADPVRAREQVEASLRMLGRNIDLIQVHNVADLATQYSLLK
                     EYKHAGRVRYIGTTSTFEGQYATLEQFMRDESPDFIGIDYAVDNLTAEERLFPLAQEQ
                     GIGVLCYLPFGRTRLWQRVEGHTVPAWAAEFGATTWAQFFLKFAASHPAVTVVTPATS
                     KPHHMVDNMTAARGRLPDDAERRRMIDFIAALPS"
     gene            complement(1409..>1649)
                     /locus_tag="VIQ99_02135"
     CDS             complement(1409..>1649)
                     /locus_tag="VIQ99_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020593868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY9181967.1"
                     /translation="IVALLLYTRAVAILGAARGAVFAALVPTFSLLIAIPLLHELPTH
                     LQLAGVVLVTVGMVFALGLSDPTKWRALPTTARPR"
BASE COUNT          304 a          544 c          564 g          237 t
ORIGIN      
        1 ccggactcaa tatcgacatc gctgccgcag tcacatctgc gatcacggga ccgatccaga
       61 tcatcagcgt gcaagtcgag aacatcgatt tctccgaggc gtacgagcag agcgtcgagc
      121 aacgcatgct cgcgcaggtc gagatccagc gccgcgagca gaacctgcga acgaccgagg
      181 tcgaggcgca gatcgcgcgc acgcgcgccg agggcgaggc ggaggcgatc cgcttgcgcg
      241 gcgaggcaga ggccgccgcg attcgcgctc gtgcggacgc gttgcgagcg aacgccgacc
      301 tcgtgcagct gcaagccgtc gagaagtggg acggcaagct gccgacgacg atggtgccga
      361 gcacggcgtt gccgttcatc gatctgcagc cggcaagacc gactaactga agattccaat
      421 agcggtcgct cgggaggcgt tccggcccgt cgcgcggccg tgtatttttc gtctcatcca
      481 ctcggagggg agcgagccat gctgacgcga cgcgattgcc tgagattcac ggcgcaagcg
      541 ggggccgcac tggcgttgcc gctgccgctg ctcgcacaag gcgcggtcct cacgcggccg
      601 gttccaaaga ccggcgagca gctgccgatc atcggcctcg gcagctcggc cacgttcagc
      661 caggcggccg gcgcggccga catggaggcg attcgctccg tgttcacggc gatgctcgac
      721 aacggcggca cggtgttcga cacggcgccg ggctacggcg agtcggaaga ggtcgctgcg
      781 aaggccgtca acgagatcgg cgctcgcgat cgggtgttct gggccacgaa gctgaacgtc
      841 gcgggccgcg gagccagcgc cgatccagtg cgcgcacgcg agcaggtcga ggcgtcgctg
      901 cgcatgctcg gccgcaacat cgacctgatt caggtgcaca acgtcgccga cttggcgacg
      961 cagtattcac tgctcaagga gtacaagcac gcgggccgcg ttcgctacat cggcacgacg
     1021 tcgacattcg aagggcagta cgcgacgctc gagcagttca tgcgcgacga gtcgccagac
     1081 ttcatcggca tcgactacgc cgtcgacaac ctcacagctg aagagcgcct gttcccgctg
     1141 gcgcaggagc agggcatcgg cgtgctgtgc tatctgcctt tcggccgcac gcggctctgg
     1201 cagcgagtcg aaggccacac ggtccccgca tgggcggccg agttcggcgc gacgacctgg
     1261 gcgcaatttt tcctgaagtt cgcagcgtcg catccggcgg tcacggtcgt gactccggcc
     1321 acgagcaaac cgcatcacat ggtcgacaac atgacggccg ccaggggtcg gttgccggac
     1381 gacgcggagc ggcgccgtat gatcgacttc atcgcggcct tgccgtcgta ggcagcgcgc
     1441 gccacttcgt cgggtcgctc aagcccagcg cgaacaccat cccgaccgtg acgagcacga
     1501 cgccggccag ctgaaggtgc gtcggcagct cgtgcagcaa cgggatcgcg atcagcagcg
     1561 agaaggtcgg cacgagggcc gcgaacaccg cgccgcgggc cgcgccgaga atcgcgaccg
     1621 cacgcgtata cagcagcagc gcgacgatc
//
LOCUS       DATCUD010000151         2988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65469, whole genome shotgun sequence.
ACCESSION   DATCUD010000151 DATCUD010000000
VERSION     DATCUD010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2988
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65469"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /gene="queG"
                     /locus_tag="VIQ99_02140"
     CDS             <1..673
                     /gene="queG"
                     /locus_tag="VIQ99_02140"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEY9181968.1"
                     /translation="EKALAREAGLGWIGKHSNLLDRDGSWFLLGELYTDLPLPPDTRV
                     RDHCGSCRACIDVCPTAAIVAPYEVDARRCISYLTIELKGSIPESLRPAIGNRIFGCD
                     DCQLFCPWNKFARPTSVGDFAVRHGLDHTGLVELLAWSESEWLSRTEGSALRRAGYVG
                     WLRNIAVALGNAPPDDRVIAALESRADHPSPIVREHVHWALARQRARGAKTANCVTVA
                     PVIAP"
     gene            708..1706
                     /locus_tag="VIQ99_02145"
     CDS             708..1706
                     /locus_tag="VIQ99_02145"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY9181969.1"
                     /translation="MSIPNFESLAYGIDTDFRRSLLQGIALFRGIDGESISDLLPQCG
                     RIDVKEGHILLSPQRENHCVYVVLSGRLSVHLGSLDAPKIADLGPGSCAGEMSLIEDK
                     DPSAFVVATEDSHLMVISHTLLWRMVDRSHTFCKNLLIVLSERVRSDNEYIASSLGVL
                     RQAERNAHTDALTGLGNRHWMRTMFEREVTRTLHSKKALCLMMIDVDNFKLFNDRYGH
                     IAGDRVLVAVAEALREYLRPTDLVARFGGDEFAVLLPDLMVKQARQTAERIRQQIAAL
                     SPASLSTAITVSIGIASRTGTDDVATLVQRADAAMYDAKEAGRNRVAVLVGDPSDE"
     gene            complement(1695..2561)
                     /gene="panC"
                     /locus_tag="VIQ99_02150"
     CDS             complement(1695..2561)
                     /gene="panC"
                     /locus_tag="VIQ99_02150"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007193056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY9181970.1"
                     /translation="MAKPTAVRTVQTANAVRAAIGEWRAAGQRVAFAPTMGNLHKGHL
                     SLANLAAETAPRVVMSIFVNPTQFGPSEDFATYPRTLAEDAALIGATGHVDLLFVPSV
                     AEIYPFGVEHAVRVQLPPLSAELCGARRPGHFDGVASVVCRLLNIVDPDVLILGQKDY
                     QQFVLMQRMVSDLRMPVELRMGPTLREPDGLAMSSRNRYLDPQQRLKAPALHAALEHV
                     RDRLRSGSADLAKLTAEACAFLERAGLTPDYVEIRRRDDLAPATPDVAEKRVVLGAAW
                     LGRARLIDNLFV"
     gene            complement(2608..>2988)
                     /locus_tag="VIQ99_02155"
     CDS             complement(2608..>2988)
                     /locus_tag="VIQ99_02155"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008169652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY9181971.1"
                     /translation="KPQSVHKLGGFKVQGRDEHAAQRMVQEARALEAAGADAVLLECV
                     PNAVGAAIRDAVTVPVIGIGAGPGVDGQILVLYDVLGITQGRMPRFVKNFMKGRDTPL
                     EALRAYVREVKERTYPAEEHCFTA"
BASE COUNT          515 a         1008 c          945 g          520 t
ORIGIN      
        1 cgaaaaggcg ctcgcacgcg aggccggcct cggttggatc ggtaagcatt cgaacctatt
       61 ggaccgcgac ggctcgtggt tcctgctcgg cgagttgtat accgacctgc cgttgccgcc
      121 cgacacgcgc gtccgcgacc actgcggctc ctgccgagcg tgcatcgacg tctgcccgac
      181 ggcagccatc gtcgcgcctt acgaagtcga cgcgcggcgc tgcatctcct acctcacgat
      241 cgagctcaag gggtcgatcc ccgagtcgtt gcggcccgcg atcggcaacc gcattttcgg
      301 ctgcgacgat tgccagctgt tttgcccgtg gaacaagttc gcgcgcccaa cgagcgtcgg
      361 cgacttcgcg gtccgccacg ggctcgacca caccgggctc gtcgagctcc ttgcctggtc
      421 agagagcgag tggctgtcgc ggaccgaagg ctcggcattg cgccgagccg gctacgtcgg
      481 ctggttgcgc aacatcgccg tcgcgctcgg caacgcgccg cccgatgatc gggtgatcgc
      541 ggcgctcgag tcgcgcgccg accacccgtc tccgatcgtt cgcgagcatg tgcactgggc
      601 gctcgcgcgg caacgggcgc gcggcgccaa gactgccaac tgcgtcactg ttgcgccggt
      661 aatcgcccct tagcatcccg tcggagagtt gtccggtcgt ctccgacatg agcatcccga
      721 atttcgagtc attggcgtac ggcatcgaca cggacttccg ccgttccttg ctgcagggca
      781 tcgcgctgtt ccgcggtatc gacggcgaga gcatcagcga cctgctgccg caatgcggtc
      841 gaatcgatgt caaggagggc cacatcctgc tgtctcccca gcgcgagaat cactgcgtgt
      901 acgtcgtgct gagcggacgt ttgagcgtgc acttggggtc gctggatgcc cccaagatcg
      961 ccgacttggg ccccggctct tgtgccggcg agatgtccct gatcgaagac aaggatcctt
     1021 ccgcgttcgt ggtggcgaca gaagactctc acctgatggt gatcagccac accctcttgt
     1081 ggcggatggt cgatcgctcg cacacattct gcaagaacct gttgatcgtg ctatcggagc
     1141 gagtgcgatc cgacaacgag tacatcgcca gcagcctcgg cgtgctgcgg caagcggagc
     1201 gcaacgcaca caccgacgcg ctgacggggc tcggcaaccg tcactggatg aggacgatgt
     1261 tcgagcgcga agtgactcga accttgcaca gcaagaaggc gctttgcctg atgatgatcg
     1321 acgtcgacaa cttcaagctg ttcaacgatc gctatgggca catagcgggt gatcgcgtgc
     1381 tcgtcgccgt ggcggaagcc ctgcgcgaat acctgcggcc gacggacctc gtcgcacgct
     1441 tcggcggcga cgagttcgcg gtcctgctgc ccgacctcat ggtcaagcag gcacgtcaaa
     1501 cggcagaacg cattcggcag cagatcgctg cgctgtcgcc ggcgagcctg tccaccgcga
     1561 tcaccgtctc gatcgggatc gcgagcagga cgggcaccga cgatgtcgcg actctcgtgc
     1621 aacgagccga cgctgcgatg tatgacgcga aggaagcggg ccgcaaccgc gtcgcagtac
     1681 tggtcggcga cccttcagac gaataggttg tcgatcagcc gcgcccgacc gagccaggcg
     1741 gcgccgagca cgacgcgctt ttccgcgaca tccggagtcg ccggcgcaag gtcgtcgcga
     1801 cgccggatct ctacgtagtc gggcgtgagg ccggcacgct ccaagaacgc gcaagcctct
     1861 gccgtcagct tcgccaaatc ggccgacccg ctgcggagcc ggtcgcgcac atgctcgagc
     1921 gcagcgtgca acgccggagc cttcagccgt tgctgcggat cgagatagcg gttgcgtgag
     1981 ctcatcgcca gcccgtccgg ttcgcgcaac gtcggcccca tacgcagctc gacgggcatc
     2041 cgcaagtcgc tcaccatgcg ctgcatcagc acgaactgct gatagtcctt ttgaccgaga
     2101 atcaacacgt cgggatcgac gatattcagc aggcggcaca cgacggatgc gacaccgtcg
     2161 aaatgtcccg ggcgacgggc accacagagc tccgcgctca acggcggcaa ctgcacgcgc
     2221 accgcatgct cgacaccgaa tgggtagatc tcggcgacgc tcggcacgaa caacaggtct
     2281 acgtggccgg tcgccccgat caatgctgcg tcctcggcca gcgtgcgtgg gtaggtcgcg
     2341 aagtcttcgc tgggcccgaa ctgcgtcggg ttcacgaaga tgctcatcac gacgcgcggc
     2401 gcagtctcgg ctgcgaggtt cgcgaggctc aaatgcccct tgtgcaagtt gcccatcgta
     2461 ggagcgaacg caactcgttg tccggcggcg cgccattcgc cgatggccgc gcggacggcg
     2521 ttcgccgttt gcaccgtccg gacggcggtc ggtttcgcca acgtcgattc ctcggggctc
     2581 aagccagggt tgagtctagc agcgcactca cgccgtgaag cagtgttcct cggccgggta
     2641 ggtgcgttcc ttgacctcgc gaacatacgc acgcagcgcc tcgagcggcg tatcgcggcc
     2701 tttcatgaaa tttttcacga accgcggcat gcgcccctgc gtgatgccga gcacgtcgta
     2761 cagcaccagg atctgcccgt cgacaccggg gcccgctccg attccgatca cggggaccgt
     2821 caccgcatcg cgaatcgccg ctccgaccgc gttcggcacg cactcgagga ggacggcgtc
     2881 cgcaccggca gcttccagag cgcgcgcctc ctgaaccatc cgctgcgcgg cgtgctcatc
     2941 tctgccttga accttgaatc cgccgagctt gtgcaccgac tgcggctt
//
LOCUS       DATCUD010000152         2960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65489, whole genome shotgun sequence.
ACCESSION   DATCUD010000152 DATCUD010000000
VERSION     DATCUD010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65489"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..911)
                     /locus_tag="VIQ99_02160"
     CDS             complement(<1..911)
                     /locus_tag="VIQ99_02160"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181972.1"
                     /translation="MHNGSWRLAAAVAALLVGSVASAHHGFGNFDRSREVSLEGTITS
                     IDFVNPHAYVYFEATNPDGTKTAKRCEMRAATVLRRSGWSAEMFKTGELIKIEGAPDR
                     FDANSCYVHTVVFADGTTADRYAQLSKPAAAAPIVAAPRAARLPSGEPNITGDWAPEQ
                     VVMTDPRGRSGSLVPVSRVEEFEPGATTAPPGGGAGGPPRGPRVAYTDAGRAAADAFR
                     GGTTDNPRMRCETTSILFDWTFDGPVNRITQSGDTITLQYGQLGFTRTIHMNAEHPAD
                     IEPTRAGHSIGRWENDVLVVDTIGFAPG"
     gene            1054..1566
                     /locus_tag="VIQ99_02165"
     CDS             1054..1566
                     /locus_tag="VIQ99_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013262338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9181973.1"
                     /translation="MALKDTAATLGFLFSDIARLMRRNMDRRLQALGLTQAQWRAIAR
                     LSRNEGMTQIDLAESLEIQPITVTRLVDRMEKAGWVERRPHPHDRRATRLFLTPRSQP
                     ILAEMHARAADTMSEATRGVAVGAQRQLLDTLDHIKHNLNAADSVALAPVAAGNTDGR
                     RKPAKARAAR"
     gene            1526..2653
                     /locus_tag="VIQ99_02170"
     CDS             1526..2653
                     /locus_tag="VIQ99_02170"
                     /inference="COORDINATES: protein motif:HMM:NF012739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEY9181974.1"
                     /translation="MADENPPKPAPPASELPASKSRTRRVVRATLLLLGPLVALTVGG
                     YVYYTSGQVVETDNAYVQADVAVISARVAGPIDTLNVRENQRVRAGDVLFTIDSRPYQ
                     VALDRGNAQLKAIDDVVESTRASYGQVLEQLALDRTDAAYEQRELDRLTALADRKLAS
                     EVDVDEARHDRDVATQKIAVTERSLDQIRARLGGDLTLPVTEQAAYLAAKSMRDAAAL
                     DVEHTVVRAPLDGIASKVPTVGEYVSPGAPVMTVVADDDVWIEANFKETDLTHVEVGQ
                     PVEIRVDTYPDRRWRGKVASISQATGAVFSVIPAQNATGNWVKVAQRIPVRISIEPGN
                     DGIDLRAGMSAIVDIDTGYERPAPRWVRALLPSGPAFAAER"
     gene            2663..>2960
                     /locus_tag="VIQ99_02175"
     CDS             2663..>2960
                     /locus_tag="VIQ99_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008890137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9181975.1"
                     /translation="MSQAAAATAVASPNRGMITVSVMLATVMQVVDTTIVNVALPQMQ
                     GGMSATQDQISWVLTSYIVAAAIFTPLTGVLADTFGRKRLFAAAVVGFTVASMLC"
BASE COUNT          508 a         1027 c          973 g          452 t
ORIGIN      
        1 cccggcgcga aaccgatcgt gtcgacgacg agcacgtcgt tctcccaacg gccgatcgaa
       61 tgtccggcgc gcgtcggctc gatgtccgca ggatgctcgg cgttcatgtg gatcgtgcgc
      121 gtgaatccga gctgaccgta ctgaagcgtg atcgtgtcgc cgctctgcgt gatccggttg
      181 acgggaccgt cgaatgtcca gtcgaacagg atgctcgtgg tctcgcaacg catacgcggg
      241 ttgtcggtcg tgccaccccg gaacgcatcg gcggccgcgc gaccggcatc cgtgtaggcg
      301 acgcgcggac cccttggcgg tccacctgcg ccgccgcccg ggggcgccgt ggtcgcgccc
      361 ggctcgaact cctcgacgcg gctcacgggt accagcgagc cgctgcggcc gcgcggatcc
      421 gtcatcacga cctgctccgg cgcccaatcg ccggtgatgt tcggctcgcc ggacggcaga
      481 cgcgccgcgc gcggcgccgc cacaatggga gccgcggccg ccggcttcga cagctgcgcg
      541 taacgatccg ccgtggtgcc atccgcgaac acgaccgtgt gcacgtagca cgagttcgcg
      601 tcgaagcgat ccggcgcgcc ctcgatcttg atcagctcgc cggtcttgaa catctcggcc
      661 gaccagcccg accgacgcaa cacggtagcg gcacgcatct cgcaacgctt cgcggtcttc
      721 gtgccgtcgg gattcgtcgc ttcgaagtac acataggcgt gcggattcac gaagtcgatg
      781 ctcgtgatcg tgccttcgag cgaaacttcg cggctgcgat cgaaattgcc gaacccgtga
      841 tgcgcgctgg cgacgctgcc gacgagcaaa gccgcgacgg cagccgcgag ccgccaagat
      901 ccgttgtgca tgattccccc actcgagagc tccggctatt aacgcgcact tccgctctca
      961 cggcaaccgg ctcgagtccg cggacccagg cccgttgtag gactccgcgt gtcacactta
     1021 taatgagcat gcttagtatt acgcggtgac acgatggccc tcaaagacac ggccgccacg
     1081 ctcggctttc tattcagcga tatcgcccgc ctgatgcgtc gcaacatgga ccggcgcctg
     1141 caggccttgg gcctcacgca ggcccagtgg cgtgcgatcg cacgcctatc gcgcaacgaa
     1201 ggcatgacgc agatcgatct cgccgagagc ctcgagattc agccgatcac ggtgacgcgg
     1261 ctcgtcgacc gcatggagaa agccggctgg gtcgagcggc gcccgcatcc gcacgaccgc
     1321 cgtgcaacgc ggttgttctt gacgccgcgc tcgcagccca tcctcgccga gatgcatgcg
     1381 cgcgccgcgg acaccatgag cgaggcgacg cgcggagtcg cggtaggcgc gcagaggcaa
     1441 ctgctcgaca cgctcgatca catcaaacac aacctgaatg ccgcggactc cgtggcgctc
     1501 gcgcccgttg ccgcaggaaa caccgatggc agacgaaaac ccgccaaagc ccgcgccgcc
     1561 cgctagcgag cttccggcga gcaagagccg cacgcgccgc gtcgtgcggg cgacgctgtt
     1621 gttgctcggc cccctcgtcg cattgacggt cggcggttac gtctattaca cgtcgggcca
     1681 agtcgtcgaa accgacaacg cgtacgtgca ggccgacgtc gcggtcatca gcgcgcgtgt
     1741 cgcgggaccg atagacacgc tcaacgtgcg cgagaaccaa cgggtccggg ccggcgacgt
     1801 gctgttcacg atcgactcgc ggccgtacca agtcgcattg gatcgcggca acgcgcagct
     1861 caaggccatc gacgacgtcg tcgagagcac gcgcgcgtca tacggccaag tgctggagca
     1921 gctcgcgctc gaccgaaccg atgccgcgta cgagcagcgc gagctcgatc gcctcacggc
     1981 gctcgcggat cgcaagctcg cgtccgaggt cgacgtcgac gaggcgcggc atgaccgcga
     2041 cgtcgcgacg caaaaaatcg cggtcacgga gcgctcgctg gaccagatcc gagcgcggct
     2101 gggcggcgat ctgacattgc ccgtgaccga gcaagcggcc tacctcgccg cgaaatcgat
     2161 gcgcgacgcc gccgcgctcg acgtcgagca cacggtcgtg cgcgcgccgc tcgacggcat
     2221 cgcgagcaag gtgccgaccg tcggcgagta cgtgagcccg ggcgccccgg tgatgaccgt
     2281 ggtcgcggac gacgacgtat ggatcgaagc gaacttcaag gaaaccgacc tgacccatgt
     2341 cgaggtcggc cagcccgtcg agatccgggt cgacacgtac cccgaccgtc gctggcgcgg
     2401 caaagtcgcg agcatcagcc aagcgaccgg cgccgtgttc tcggtgatcc ctgcccagaa
     2461 cgcgaccggc aactgggtca aggtcgcgca gcgcatcccg gttcggatct cgatcgagcc
     2521 cggcaacgac ggcatcgacc tgcgcgccgg aatgagcgcg atcgtcgaca tcgacaccgg
     2581 ttacgaacgg cccgcgccgc gctgggttcg tgcgctgttg ccgagcgggc ccgcgttcgc
     2641 ggccgagcgc tagcgttcgg cgatgagcca ggccgcagca gcgaccgccg tcgcgtcgcc
     2701 gaatcgcggc atgatcacgg tgtccgtgat gctcgcgacc gtcatgcagg tcgtcgacac
     2761 gacgatcgtg aacgtcgcgc tgccgcagat gcagggcggt atgtccgcga cacaggacca
     2821 aatctcctgg gtgctcacgt cgtacatcgt cgcggctgcg atcttcacgc cgctcacggg
     2881 tgtgctcgcg gacacgttcg ggcgcaaacg gctgttcgcg gcggccgtcg tcggcttcac
     2941 cgtggcgtcg atgctgtgcg
//
LOCUS       DATCUD010000153         1682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79722, whole genome shotgun sequence.
ACCESSION   DATCUD010000153 DATCUD010000000
VERSION     DATCUD010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79722"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..532
                     /locus_tag="VIQ99_02180"
     CDS             <1..532
                     /locus_tag="VIQ99_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181976.1"
                     /translation="ITEIETFVVRIGDQRWFAPQALKTLSGIFAEPVPAAARNTRAEL
                     TAAADAYFTAIETEGTPAFVQAPFGPGVKRFENGLQTTHVTENPILERHTWSPELQLE
                     RASYAGTLVRDRRYPVVDVEHGSVLAVATFRREGEHTPTLLLAEIFKVTEGKLREIRA
                     VILNVPNGAGTGWSAP"
     gene            complement(529..>1682)
                     /locus_tag="VIQ99_02185"
     CDS             complement(529..>1682)
                     /locus_tag="VIQ99_02185"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY9181977.1"
                     /translation="ATNLCYSNVPAVLGLPSPTAPAPSALAAAPGRRRMADMAVIQGH
                     GGVGVVEAVGPEVRRVQVGDRVCVSGTPHCGACYRCLRGRSDMCQFLSAIGADDLVAI
                     ADLADGTPVYQNSHIGGLAELMVAFEEWVVPIFTKLPAAELGMVCGCTSVAGLGATTA
                     HALTAIEPAMSVAVVGCGPLGLSAVQGARIAGASTIIAIDPIRVRREAALEVGATHVL
                     DPNVEGDGLVQRVRALTTWPTDRLWAGGRNPAGRRPGAGADVVIEAAGLDQVTPKLER
                     GPDPTGLLPMQQAYQMCALGGHLITTSIIRGDMVLPGNLFSIGGVTHHGGQAGGCSPM
                     RDIPRFVEMLEKGQYDAKTLATTVVPLERMLEGYEEVAYRTTITGIMTA"
BASE COUNT          274 a          594 c          568 g          246 t
ORIGIN      
        1 gatcaccgag atcgaaactt tcgtggtcag gatcggcgat cagcgctggt tcgctccgca
       61 ggctctcaag accttgtccg gtatcttcgc ggaaccggta ccggcggcgg cacgcaacac
      121 gcgcgcggag ctcacggcag cggccgatgc gtatttcacc gcgatcgaga ccgaaggcac
      181 gcccgcattc gtgcaggcgc cgttcgggcc cggcgtgaaa cgcttcgaga acgggctaca
      241 gaccacgcac gtgacggaga atccgatcct cgagcgccac acgtggtcgc cggagctgca
      301 gctcgagcgc gcctcgtacg cgggcacgtt ggtcagggac cgccgctacc cggtcgtcga
      361 cgtcgagcac ggcagcgtgc tcgcggtcgc gacgttccgc cgtgaaggcg agcatacgcc
      421 gacgctgttg ctcgcggaga tcttcaaggt caccgaaggc aagctgcgcg agattcgcgc
      481 cgtgatcctg aacgtgccga acggcgccgg cacgggctgg agcgcgccct aggccgtcat
      541 gatccccgtg atcgtcgtgc gatacgcgac ctcttcgtag ccttcgagca tgcgctcgag
      601 tggcacgacc gtggtcgcga gcgtcttcgc gtcgtactgg cctttctcga gcatctccac
      661 gaaccgtggg atgtcgcgca tcggactgca accgccggct tggccgccgt gatgagtgac
      721 accgccgatc gagaacagat tgccgggcag caccatgtcg ccgcggatga tgctcgtcgt
      781 gatcaagtgc ccgccgagcg cgcacatctg gtaggcctgc tgcatcggca ataggccggt
      841 cgggtcgggt cctcgctcga gcttcggcgt gacttgatcg agcccggcgg cctcgatcac
      901 gacgtcggcg ccggcgccgg gacggcgccc ggccgggttg cgcccaccgg cccacagtcg
      961 atccgtcggc cacgtcgtca gcgcgcgcac gcgctgcacg agaccgtcac cctcgacgtt
     1021 cgggtcgagc acgtgtgtgg cgccgacctc gagcgcggcc tcgcgccgca cacggatcgg
     1081 atcgatcgca atgatcgtcg aggcccccgc gatccgcgcg ccctgcacgg cggagaggcc
     1141 gagcggcccg caaccgacga cggcgacgct catcgcgggc tcgatcgcgg tcagtgcatg
     1201 cgcggtcgtc gcgccgagcc ccgcgacgct cgtgcagccg cacaccatgc cgagctccgc
     1261 ggccggcagc ttcgtgaaga tcggcacgac ccattcctcg aacgcgacca tcagctcggc
     1321 caagccgccg atgtgcgagt tctgatacac gggcgtgccg tcggcgagat ccgcgatcgc
     1381 gacgagatcg tccgcgccga tcgcgctcaa gaattgacac atgtccgagc ggccgcgcaa
     1441 gcatcgataa cacgcgccgc aatgcggcgt gccggagacg cagacgcgat cgccgacctg
     1501 cacgcggcgc acctcgggac ccacggcttc gacgacgccg acgccgccat gcccctggat
     1561 cacggccatg tccgccatgc ggcgcctgcc cggcgcggcc gcgagcgcgc tcggcgcggg
     1621 agccgtcgga gaaggtaagc cgagcaccgc gggcacgttc gaatagcaga ggttcgtggc
     1681 ct
//
LOCUS       DATCUD010000154         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58292, whole genome shotgun sequence.
ACCESSION   DATCUD010000154 DATCUD010000000
VERSION     DATCUD010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58292"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1160)
                     /locus_tag="VIQ99_02190"
     CDS             complement(<1..1160)
                     /locus_tag="VIQ99_02190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I phosphomannose isomerase catalytic
                     subunit"
                     /protein_id="HEY9181978.1"
                     /translation="MPPASTAADLLLEGDRAVAASLATRILKPWRDNLVERPWGGVRM
                     RAFKRLPPPERGALPVGESFEIAADDGDEEARQHPSVLTLDDGSRIALPALLAVHADT
                     LLGDEFVRHYGRRYPLLPKLLDVAELLSIQAHPPGNTEVYVIVDVDHGATIRLGFAAD
                     VSAETLAADLSAGRREQQRLLDLVAGAMTPDELQAALKGWFARRNATPDELQATVGRK
                     LGGGVRWPDVAACLALLHGVYWRALEAMNAIPVAAGDVIYNANPPRVVAASGQPASAE
                     VHALGNPEGRGILALEIRRPGPTMRAWDNVRFPLRPVDIDAALANVNLTATEPKDFIV
                     EPRLVRAGVRRSVDCDYFRLEHFDVAADSAIDVPASKPHSLHALAGKVAVQGA"
     gene            1346..>1905
                     /locus_tag="VIQ99_02195"
     CDS             1346..>1905
                     /locus_tag="VIQ99_02195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181979.1"
                     /translation="MSESEARASELDEELKRKRTPRNRVEEQLDVLTHRLENVEAERT
                     RWEQQAGHLEEIAEAERVKVAQLKKKLEIAESGPTKLTKKEINFWRAKAESIDIEIRE
                     YKDRLASLRRELNERDAQIEKLQNASGAAPAPRAEPAQAPDAAVAELRRQLEQRDEWL
                     AELRLELHEVRSQPSAPLEVQAEVETL"
BASE COUNT          358 a          651 c          627 g          269 t
ORIGIN      
        1 gcgccttgca ccgcgacctt gcccgccagg gcgtgcaagc tgtgcggctt ggatgccggc
       61 acgtcgatcg cactatcggc cgccacgtcg aaatgctcga ggcggaagta atcgcaatcg
      121 acggagcggc gcacgcccgc acgcacgagc cgcggctcga cgatgaagtc cttgggctcg
      181 gtcgcggtca ggttcacgtt cgcgagcgcc gcgtcgatgt cgaccggtct caacggaaaa
      241 cgcacgttgt cccatgcccg catcgtcggg ccgggccgcc gaatttcgag cgcgaggatg
      301 ccgcggcctt cggggttgcc gagcgcatgc acttcggccg acgccggttg gccgctcgcc
      361 gcgaccacgc gcggcggatt cgcgttgtag atcacgtcgc cggccgcgac cggaatcgcg
      421 ttcatggctt cgagcgcgcg ccaatagacg ccatgcagca gcgcgaggca cgcggcgacg
      481 tcgggccagc gcacgccgcc gccgagcttg cggcccaccg tcgcttggag ctcgtccggc
      541 gtcgcgttcc ggcgtgcgaa ccagcccttg agggcggcct gcagctcgtc cggcgtcatg
      601 gcgccggcga cgagatccag cagccgttgc tgctcgcgcc ggcctgcgct caaatccgcg
      661 gccaatgtct ccgcggaaac atcggcggca aacccgagcc gaatcgtcgc gccatgatcc
      721 acgtccacga tcacgtagac ctcggtgttg ccgggcggat gcgcctgtat ggacaggagc
      781 tcggccacgt cgagcagctt cggcaacaac gggtaacgcc ggccgtaatg gcgcacgaac
      841 tcgtcgccga gcagcgtgtc ggcgtggacg gccaacagcg ccggcaacgc aatccgcgag
      901 ccgtcgtcga gcgtcaatac gctcgggtgc tgacgggcct cctcgtcgcc gtcgtcggcc
      961 gcgatctcga acgactcgcc gaccggcaaa gcgccgcgtt ccggaggcgg caggcgcttg
     1021 aacgcgcgca tccgcacccc accccatggc cgctcgacca aattgtcacg ccacggtttc
     1081 aggatccgcg tggccagcga agcggcgaca gcgcggtcgc cttcgagtaa caggtcggcg
     1141 gcggtgctcg caggcggcac agcgaaggtc catgcacgag aatggggctc agtatgccac
     1201 ggccgtttat gtcaaaacgt gactgattac cgcgcgtaag ctcgctgaag cggcgtaccc
     1261 tccccgcaat tctgttcact gtggtcgagc gatggctaac ccgcgggact tagccgaaca
     1321 ggctttcgcc ctcctccaaa acgctttgag cgagtcggaa gcccgtgcgt ccgagctcga
     1381 tgaagagctg aaacggaaac ggaccccgag gaaccgcgtc gaggagcagc tcgacgttct
     1441 gacccatcgg ctcgagaacg tcgaagccga gcgcacgcgc tgggaacaac aggccggcca
     1501 cctcgaggag atcgcggaag ccgagcgcgt caaagtggcg cagctcaaga agaagctcga
     1561 gatcgcggaa tccggcccca cgaagctgac caagaaagag atcaacttct ggcgcgcgaa
     1621 agccgaaagc atcgacatcg agatccggga atacaaggat cggctcgcaa gcctacgccg
     1681 tgagctgaac gagcgcgacg cacagatcga gaagctgcaa aacgcttcgg gtgctgcgcc
     1741 ggcgccccgc gccgagcccg cacaagctcc cgacgctgcc gtcgcggaac ttcgccgcca
     1801 gctcgagcaa cgcgacgaat ggctcgccga attgcggctc gagctgcacg aggtgcgctc
     1861 ccagccgagc gcgccgctcg aagtgcaagc cgaggtcgag accct
//
LOCUS       DATCUD010000155         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1672, whole genome shotgun sequence.
ACCESSION   DATCUD010000155 DATCUD010000000
VERSION     DATCUD010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1672"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..244)
                     /locus_tag="VIQ99_02200"
     CDS             complement(<1..244)
                     /locus_tag="VIQ99_02200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181980.1"
                     /translation="MARSRPALVTVALSAAAALGYVTYRILTPPAPVGSEAAPLMVDI
                     AADPEDGAPLQTAETLPDFSLGNLAGEPQSIRSWPGK"
     gene            complement(304..>1684)
                     /gene="dsbD"
                     /locus_tag="VIQ99_02205"
     CDS             complement(304..>1684)
                     /gene="dsbD"
                     /locus_tag="VIQ99_02205"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF001419.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)) activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEY9181981.1"
                     /translation="LVLPATSEFPSPAVPAGDELVSEQDQWAARVVNGSWPELLGWFF
                     LGGLLLSFTPCVLPMVPILSSIIAGQGAVSAGRGFALSVSYVLGMAFTYTILGMLSAL
                     AGQQLQAALQEPWILSLFAAVFVVGALGLFGAFQFQMPTAIQTRLSNLANRQKAGTFA
                     GTAIIGALTALIVTTCVAPVLVGALVVIGQTGDVARGGGALFAMSIGMGTPLLAVGAS
                     AGYLLPKAGPWMNTIKAGFGVVMLGFAIYLVGRFLPPTPTLFLWAVLVFFTGVFIGAF
                     DALPADATPGRRLAKGIGVLTCLYGALMFIGALLGGGSVLEPIPRAALAPSTGGALAV
                     TAPELGFRAIETVAELDAALGEARAANQPVMLDFTAEWCVSCKEMEEYTFPDASVIGA
                     LEPYMLLRADVTDNNDDDKALLQRFQSFGPPTIAFFDRSGFERTNYKLVGFVPADKFA
                     DHVASLAAL"
BASE COUNT          326 a          564 c          559 g          235 t
ORIGIN      
        1 gcttgccggg ccagctccgg atcgactgcg gctcaccggc cagattcccg agcgaaaagt
       61 cgggcagcgt ctccgcggtt tgcagaggcg caccgtcctc ggggtcggct gcaatgtcga
      121 ccatgagggg ggcggcttcg gagccgacgg gcgccggcgg cgtcaagatc cggtacgtca
      181 catacccgag cgcagccgca gcgctcagcg cgacggttac gagcgccggc cgtgacctag
      241 ccacggccga gggcctcggc aactgctccc tgcgttgccc taccgcgggc atccatgccc
      301 gcgtcagagc gcggcgaggc tcgcgacgtg gtcggcgaat ttgtcggccg gcacgaaacc
      361 cacgagcttg tagttcgtgc gctcgaagcc gctgcgatcg aagaatgcga tcgtgggtgg
      421 gccgaagctc tggaaccgtt gcagcagcgc tttgtcatcg tcgttgttat cggttacatc
      481 ggcacgcaac aacatatacg gttcgagcgc gccgatcacg ctcgcatccg ggaacgtgta
      541 ctcctccatt tccttgcagg agacgcacca ttccgcggtg aagtctagca tcacgggctg
      601 attcgccgcc cgggcctcgc cgagcgccgc atcgagctcg gccaccgttt cgatcgcacg
      661 aaacccgagc tcgggcgcgg tcacggcgag agccccgccc gtgctcgggg ccaacgcggc
      721 acggggaata ggctcgagga cgctaccgcc gccgagcagg gcgccaatga acatcaaggc
      781 gccgtacagg caggtcagca cgccgatgcc cttcgcgaga cgccgtcccg gtgtcgcgtc
      841 tgccggcaag gcatcgaacg cgccgatgaa gacgccggtg aagaaaacca gcacggccca
      901 caggaacagc gtcggcgtcg gcggcaggaa gcgtccaacc aagtagatcg cgaagccgag
      961 catgacgacg ccgaagccgg ccttgatcgt gttcatccaa ggcccggcct tcggcaacag
     1021 atacccggcc gaggcaccga cggcgagcaa cggcgtgccc attccgatgc tcatcgcgaa
     1081 cagcgcgcct ccgccccggg cgacgtcgcc cgtttggccg atgacgacga gcgctccgac
     1141 gagcacgggc gcgacgcagg tcgtgacgat caatgccgtc aaagcgccga tgatcgcggt
     1201 gccggcgaac gttccggctt tctgacgatt tgcgaggttc gagagccgtg tttgaatcgc
     1261 cgtgggcatc tggaactgga aggcgccgaa caacccgagc gctcccacga cgaaaacggc
     1321 ggcgaacaac gaaaggatcc agggctcttg cagggctgcc tgcagctgct gcccggccaa
     1381 agccgacagc attccgagga tcgtgtacgt gaaggccatg ccgagcacat agctcaccga
     1441 gagcgcgaag ccgcggccgg cggatacggc tccttgccct gcgatgatgc tcgagaggat
     1501 cggcaccatc ggcaagacac agggcgtgaa cgagagcagg agccccccca agaagaacca
     1561 gccgagcagc tcgggccagg acccgttcac gactcgagcc gcccactgat cctgctcgga
     1621 aacgagctcg tcgccggccg gcacagccgg cgacgggaac tcgctcgtgg cgggcagtac
     1681 gagc
//
LOCUS       DATCUD010000156         2410 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_79763, whole genome shotgun sequence.
ACCESSION   DATCUD010000156 DATCUD010000000
VERSION     DATCUD010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2410
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79763"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..403)
                     /locus_tag="VIQ99_02210"
     CDS             complement(<1..403)
                     /locus_tag="VIQ99_02210"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY9181982.1"
                     /translation="MTDPVAAALERVVAAVGPSGLVSPSDAAPLLRDGRGLYAGAAAL
                     VVRPASVDECAAVVRICHEARLGVVPQGGNTGYCGGATPFDGRRQILLSLARLNRVRE
                     IDEVGFTMTAEAGVVLARAQEAAREHGLLFPL"
     gene            477..1175
                     /locus_tag="VIQ99_02215"
     CDS             477..1175
                     /locus_tag="VIQ99_02215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012078395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY9181983.1"
                     /translation="MLLIRRSDDRGRANLGWLDSRHTFSFADYHDERFMGYGPLRVIN
                     EDRVQPGKGFGTHGHRDMEIISYVLEGELAHRDSIGNGSVIRRGDVQRMTAGTGVQHS
                     EFNHSPTEPVHFFQIWIFPDKRGLAPGYEEKHFDDEAKRGRLKLVASRDGRDGSVLIH
                     QDAELYSTLLASGDEVAHTTERIRKGWVQLASGAVTVNGEALAPGDGAAIAYEETIAI
                     KASADSELLLFDMA"
     gene            complement(1212..2297)
                     /locus_tag="VIQ99_02220"
     CDS             complement(1212..2297)
                     /locus_tag="VIQ99_02220"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9181984.1"
                     /translation="MDTLGAMGNGRRARLRVAAALAGAASWPLALFAHHSTAEYDSTT
                     VVEAQGEITKVLWQNPHVRIEISTQRIDGVADLWYLEGQNPTDLDRARIPRNIVKVGD
                     TVRFAGNASTRRARHMYVTNVLLQDGTELVLRANAAPRWAPDRYLSHRQATIDPKRVA
                     ADRADGIFRVWLPIAAVTPEWAADPPLTDKARAAWLAYDAIRDDPVLDCRSPGMPQVI
                     TRSGRYAIRFERSGDDIVLKNEYREVDRIIHMGIATSSTASRSPTPLGYSTGRWDAGS
                     LVVTTTDIDWPYFQLYGLEGVPQSREIEIVERFTPSADGSELIYDITATDPQTFTRTV
                     TAEGYRTFRWQPGFEFLPQDCVLDAAQ"
BASE COUNT          411 a          816 c          801 g          382 t
ORIGIN      
        1 tgagcgggaa aagcagaccg tgctccctcg cagcctcctg agcccgtgcg agcacgacac
       61 cggcctcggc cgtcatcgtg aatccgactt cgtcgatctc acgcacgcga ttcaggcgcg
      121 cgagcgacaa caggatctgg cgccggccat cgaacggcgt cgcaccgccg cagtagcccg
      181 tgttgccgcc ttgcggcacg acgccaagcc gcgcctcgtg gcagatccgc acgacggccg
      241 cgcattcgtc gaccgacgcg ggccgcacga cgagcgcggc ggcgccggca tagagccccc
      301 gcccgtcgcg cagcagtggc gccgcatcgc tcggcgagac gaggccgctc ggtccgaccg
      361 cggcaacgac acgttcgagc gcagcggcga cgggatcggt catcgccgtg aatcttacgg
      421 taaacgtttg cgttcgcgga ggcccgccgc cctcgcacgc gtgcgataat ccttcgatgc
      481 tgctgatccg acgttccgac gaccgcggcc gagccaactt gggctggctc gacagccgcc
      541 acacgttctc gttcgcggac taccatgacg agcgtttcat gggctacggc ccattgcgcg
      601 tgatcaacga ggaccgcgtg cagcccggca agggcttcgg cacgcacggc caccgcgaca
      661 tggagatcat ctcgtacgtg ctcgagggcg agctcgccca tcgcgacagc atcggcaacg
      721 ggtccgtgat ccgccgcggc gacgtgcagc gcatgaccgc cggcaccggc gtgcagcaca
      781 gcgaattcaa tcattcgccg accgagcccg tgcatttctt tcagatttgg atcttcccgg
      841 acaaacgcgg cctggcgcca ggctacgagg agaagcattt cgacgacgag gcgaagcgcg
      901 ggcgcctgaa gctcgtcgct tcacgcgacg gccgcgacgg ctcagtgctg attcaccaag
      961 acgccgagct gtactcgacg ctgctcgcca gcggcgacga agtggctcac acgaccgagc
     1021 gcatccgcaa gggctgggtg cagctcgcga gcggcgcagt caccgtgaac ggcgaggcgc
     1081 tcgcgcccgg cgacggggcc gcgatcgcct acgaagagac gatcgcgatc aaagcctctg
     1141 ccgacagcga gctgctgctg ttcgacatgg cgtaagcgcc gccgcgcggt aaccgaacgc
     1201 gtcgcggaac gtcactgcgc ggcgtcgagc acgcaatctt gcggcaagaa ttcgaaaccg
     1261 ggctgccaac ggaatgtccg gtagccttcg gccgtcacgg tccgcgtgaa cgtttgcggg
     1321 tccgtcgccg tgatgtcgta gatgagctcg ctgccatccg cgctcggcgt gaaacgctcg
     1381 acgatttcga tctcgcgact ctgcggaacg ccttcgagac cgtagagctg gaagtacggc
     1441 cagtcgatgt cggttgtcgt caccaccaaa gagcctgcat cccaacggcc cgtcgagtac
     1501 ccgagcggcg tcggtgatcg cgacgcggtc gagctcgtcg caatacccat gtggatgatc
     1561 cgatcgacct ctcggtactc gttcttgaga acgatgtcgt cgccggatcg ctcgaaccgg
     1621 atcgcgtagc gaccgctgcg cgtgatgact tgcggcatgc cgggcgacct gcagtcgagc
     1681 accggatcgt cgcggattgc gtcgtaggcc agccacgcgg ctcgcgcctt gtcggtcaac
     1741 ggcgggtcgg cagcccattc gggcgtcacg gccgcgatcg gcagccagac gcggaagatc
     1801 ccgtcggcgc ggtcggcggc gacgcgcttg ggatcgatcg tggcctgccg atggctcagg
     1861 tagcggtccg gcgcccaacg cggggctgcg ttcgcgcgca ggacgagctc cgtgccgtct
     1921 tgcagcaaca cgttcgtgac gtacatgtgg cgcgcgcgcc gcgtcgacgc attgccggcg
     1981 aaccgcacgg tgtcgccgac cttcacgatg ttgcgcggta tccgggcgcg atcgaggtcg
     2041 gtcgggttct gcccttcgag gtaccagagg tccgcgactc cgtcgatgcg ctgcgtgctg
     2101 atctcgatcc ggacgtgggg gttctgccac agcaccttcg tgatttcgcc ttgggcctcg
     2161 acgaccgtgg tggagtcgta ctcggccgtc gagtggtgcg cgaacagcgc gagcggccag
     2221 ctcgcggcgc cggcaagcgc cgcggcgaca cgcaaacggg ctcgccggcc gttccccatg
     2281 gcgcccaacg tatccaaaag acggctcgat tgatagcatc gagacgattc cggggaacac
     2341 cttgagcacg acgctgaaaa cggctgcgct cgcggttcta ctgacagcga gtaccgccta
     2401 cccgcaagat
//
LOCUS       DATCUD010000157         1694 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86863, whole genome shotgun sequence.
ACCESSION   DATCUD010000157 DATCUD010000000
VERSION     DATCUD010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86863"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..618
                     /locus_tag="VIQ99_02225"
     CDS             <1..618
                     /locus_tag="VIQ99_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HEY9181985.1"
                     /translation="FCHALPATWHQMGVILSATDSLNWLARLTGTTPGELTASIGEQL
                     APPGHVMFLPYLGGERTPHNDATARGVFVGLSHESDRRALTQAVVEGVAFALCDSRDA
                     LRAAGTSIERLTAVGGGSRSRYWLKVLAAALNIPIDVPAAADLGAALGAARLGLVAAT
                     GADPAHVCARPPIAATVEPNPAHAAAFAAARERYRALYPAIRGAS"
     gene            793..1059
                     /locus_tag="VIQ99_02230"
     CDS             793..1059
                     /locus_tag="VIQ99_02230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009314320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DksA/TraR family C4-type zinc finger protein"
                     /protein_id="HEY9181986.1"
                     /translation="MATGWAREGAVQDQIDDTVKDGVLRIRSRLPQGPSAERCDHCGE
                     TIPEARRVAIAGVRLCIVCQSKADEEIRHFSGYNRRGSKDSQLR"
     gene            1204..>1694
                     /locus_tag="VIQ99_02235"
     CDS             1204..>1694
                     /locus_tag="VIQ99_02235"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018328012.1"
                     /note="catalyzes the interconversion of D-xylose to
                     D-xylulose; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HEY9181987.1"
                     /translation="MTTGFFGDVGKIAYEGVESSNPLAFRWYDRDRVVLGKRLEDHLR
                     FAVCYWHTLVWTGSDAFGGQTFDRPWFGDTAAAAKLKADVAFELFTTLGVPYYCFHDA
                     DVRPEGATFAENTKNLNAAVAYLERKQAETGVKLLWGTANLFSHRRYMAGAATNPDPD
                     VFA"
BASE COUNT          297 a          567 c          566 g          264 t
ORIGIN      
        1 ttctgccacg ccctgccggc cacgtggcat cagatgggcg tgatcctgtc ggccaccgat
       61 tccttgaact ggctcgcaag gctgaccggc acgacaccgg gtgagctcac ggcatcgatc
      121 ggcgagcagc tcgccccgcc ggggcacgtg atgttcctcc cgtacttggg cggcgagcgt
      181 acgccgcaca acgacgctac ggcgcgcggc gtgttcgtgg gcttgagtca cgagtcggat
      241 cggcgcgcgc tcacgcaggc cgtcgtcgag ggcgtcgcgt tcgcgctctg cgacagccgc
      301 gacgcgctgc gcgcggccgg tacgagcatt gaacgcctca ccgccgtcgg cggcggcagc
      361 cgttcgcgct actggctcaa ggtattggcg gcggcgttga acatcccgat cgatgtaccc
      421 gcggccgccg acctcggcgc cgctcttggc gctgcgaggc tcgggctcgt cgcggcgacc
      481 ggcgccgatc ccgcgcacgt gtgcgcacgg ccgcccatcg ccgcgaccgt cgaaccgaac
      541 ccggcccacg cagccgcgtt cgcggcagca cgcgagcgct accgcgcgct gtatcccgca
      601 atccgcggcg cgagctgatc tcgctccacc ccgtgcggct gcgaacctga acgtacttaa
      661 agtgacttcg agaacccctc cgcggagggg gccgtggtcg accacgaagg tgggccgtcc
      721 cgccgacgtt gccgcgcaac ggcggtttga ggcaacctgt ccggaatacg gctgttcact
      781 cgggactctg cgatggcgac ggggtgggcg cgcgaaggcg cggtgcaaga tcagatcgac
      841 gacacggtca aggacggcgt ccttcggatc aggagccggc tgccgcaggg gccaagcgct
      901 gagcgttgcg accactgcgg cgagacgatt cccgaagcgc gccgggtcgc gattgccggc
      961 gtgcggcttt gcatcgtgtg tcagagcaaa gccgacgaag aaatacgcca cttcagcggt
     1021 tacaaccgcc gcggcagcaa agacagccaa ctgcgttgag ccacgtgcgc tgctgcagca
     1081 cgagcgagcc cgccaccaag ctgaacgaac gtgaagtggt atcgaggacc cctccgcgga
     1141 ggggcatctg caccgtaacc taacgcgcgc gaaacaagaa gaacgaacgg agcactcctt
     1201 aagatgacca ccggcttctt cggcgacgtc ggcaagatcg cctacgaagg tgtcgagagc
     1261 tcgaatccgc tcgcgtttcg ctggtacgac agggaccgtg tcgtgctcgg caagcgcctc
     1321 gaggatcatc tccgcttcgc ggtctgctac tggcacacgc tcgtctggac gggcagcgac
     1381 gcattcggcg gccaaacgtt cgatcgaccc tggttcggcg acacggcggc ggcagccaag
     1441 ctgaaagccg atgtcgcgtt cgagctgttc accacgctcg gcgtgccgta ctactgcttc
     1501 cacgacgcgg acgtgcgccc cgagggcgca acgttcgcag agaatacgaa gaacctgaat
     1561 gcggccgtcg cgtatctcga gcgaaagcaa gccgagactg gcgtgaagct gttgtggggc
     1621 acagcgaatt tgttctcgca tcgccgctac atggcaggcg cggcgacgaa tcccgatccc
     1681 gacgtgttcg cgtt
//
LOCUS       DATCUD010000158         3806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37143, whole genome shotgun sequence.
ACCESSION   DATCUD010000158 DATCUD010000000
VERSION     DATCUD010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37143"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1166
                     /locus_tag="VIQ99_02240"
     CDS             <1..1166
                     /locus_tag="VIQ99_02240"
                     /inference="COORDINATES: protein motif:HMM:NF036801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181988.1"
                     /translation="VRRTNGQAADSFDIGAGHIAPNTAVDPGLVYDNGFADHAAYLCG
                     LDEPPFSASECAAHAAAGFSSEAVDLNLPSIASSGLISGDAVRRRVTNVGPPATFTAE
                     IAPPANLDVVVEPTTLVLDTGETAEFQVRFLDRGATRDSWAFGELAWRSATHRVASPL
                     AARPVTLRAPAELFLRGRQGNATLPVAFGYGGGYGATVHGLRQPTLDANGQVPTGFVD
                     DDPTNVFSFRLDNGVAGHSFTVPPNQIYLRISLFDELTDGADDLDIYLFFCVNNQCSQ
                     LAQSDGITSDEEINIFQPVPGEYLVLVHGYETDQVAGGPGANYSLFTWAFGNNDIVGN
                     LSITAPATVGNGDRFDFPLQWSTLEPASRYLGAVSHTTPAGLYGLTIVNVVTP"
     gene            complement(1163..1735)
                     /locus_tag="VIQ99_02245"
     CDS             complement(1163..1735)
                     /locus_tag="VIQ99_02245"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017730117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY9181989.1"
                     /translation="MRCPWSEGIDPAYARYHDDEWGVPVRDDRVHFEFLVLESAQAGL
                     SWWTILRKREGYRRAFADFDPVKVARFTPRTVEKLMQDPSIVRNRQKIEAAIANARAF
                     LKIQKELGSFDRYVWEFVGGEPLVNRWRKHTDVPPTSKESDALSKDLKSRGFKFVGST
                     IVYAHMQATGLINDHLVGCFRYESCSKQRR"
     gene            complement(1855..3177)
                     /locus_tag="VIQ99_02250"
     CDS             complement(1855..3177)
                     /locus_tag="VIQ99_02250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181990.1"
                     /translation="MSAVLRVFWLFYTAFPLQRWLAVTGVVLCSILIAGGFWLEAPDA
                     VYLLVAATFTVLAAFPAVFAGAALFRALSAPRSHQLFPHFRARMLLATALLAASSILW
                     FAAVLAVPALLEGRALPAAVLVYPFGFVTAVFIWVFLFSGDWRWGSAYLLLPLGVVML
                     LRTGPGSTDADTLPLWPVATVASLAWAAFGVWYSRVRLVRPLMLTAAARREVRPWTDF
                     PTRAGAIRAMLAWNGQPSLFRPFLVAVGGGGAIGIALLVLTVLMLPKLGRMPFLTSFI
                     WPFCCMAIAGAVAGRIVGQSRLLWLMVGGGRDDIRRLIERAAWRNGVAALAVTMTTAL
                     IVIVPLGPSAREVALGLAVCASAAIYGVYVALSAVPGIKTQLVGFGLMSVAQLALIAR
                     ADPAVASVAIIVAAQLLGAALFRALAVRRWRRIDWRLVQPIRGMVGVP"
     gene            complement(3174..>3806)
                     /locus_tag="VIQ99_02255"
     CDS             complement(3174..>3806)
                     /locus_tag="VIQ99_02255"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9181991.1"
                     /translation="VPQQDELLGMLSGRQQLAVTAAFHASWDRALIDRLVNEWSVPLD
                     RRMLTLSIGERQKLSVLTALGHRPELLVLDEPVASLDPIARRQFLAELFEMPEAKTRT
                     VLFSSHIVSDLERAANKVWVIKDGRLHWQGDVDTLKESVVRLHIRARAPLPRDFSIPD
                     ALAVRIEGVTATVAISRWREERAGALARSLDAAVEVEPLGLEQIFVELNR"
BASE COUNT          732 a         1338 c         1201 g          535 t
ORIGIN      
        1 gcgtgcgtcg cacgaacggt caggcggccg acagcttcga catcggcgcg ggtcacatcg
       61 cacccaacac ggcggtcgat cccggcctcg tctacgacaa cgggttcgcc gaccacgccg
      121 catacctgtg cggtttggac gagccgccgt tctcggcaag cgagtgtgcg gcacacgcgg
      181 ccgcgggctt ctcgagcgag gccgtcgatc tgaacctgcc gtcgatcgcc agctcgggtc
      241 taatcagcgg ggacgccgtg cggcgccgcg tcacgaacgt gggcccgccc gcgacgttca
      301 cggcagaaat cgcgccgccc gcgaacctcg acgtcgtcgt cgagcccacg acgctcgtgc
      361 tcgataccgg cgagaccgcg gaatttcagg tccgcttcct cgatcgcggc gcgacgcgcg
      421 acagctgggc gttcggcgag ctcgcgtggc ggagcgccac gcaccgtgtc gcgagcccgc
      481 tcgcggcccg acccgtgacg ctgcgagctc ccgcggagct gtttctgcga ggccggcaag
      541 gaaacgcaac gctacccgtc gcattcgggt acggcggcgg gtacggtgca acggttcacg
      601 gcctgcgcca acccacgctc gatgccaacg gccaggtgcc gaccggtttc gtcgacgacg
      661 atccgaccaa tgtgttctcg ttccggctcg acaacggcgt cgcgggccac tcgttcacgg
      721 tgccgccgaa ccaaatctat ttgcgcatct cattgttcga cgagctcacg gatggcgcgg
      781 acgacctcga catctacttg ttcttctgcg tgaacaatca gtgctcgcaa ctcgcgcaaa
      841 gcgacgggat aacctcggac gaggagatca acatcttcca gccggtgccc ggcgagtacc
      901 tcgtgctcgt gcacggctac gagaccgatc aggtcgccgg cggccccggt gcgaactact
      961 cgctgttcac gtgggcgttc ggcaacaacg acatcgtggg gaatttgagc atcacggcac
     1021 ccgcaaccgt cggcaacggg gaccgcttcg atttcccgtt gcagtggtcg acgctcgaac
     1081 ccgcctcgcg ctatctaggc gccgtgtccc acacgacgcc cgcgggcctc tacggcctca
     1141 cgatcgtgaa cgtcgtgacg ccctagcggc gctgcttgct gcagctctcg tagcggaaac
     1201 agccgacgag gtgatcgttg ataagccccg tcgcctgcat gtgcgcatac acgatcgtgg
     1261 agccgacgaa cttgaagcca cggctcttca gatccttgct caaggcgtcg gactccttgc
     1321 tcgtcggcgg cacgtcggtg tgctttcgcc agcggttcac gagcggctcg ccgcccacga
     1381 attcccaaac gtaacggtcg aagctgccta actctttctg gatcttcagg aaggcgcgcg
     1441 cgttcgcgat cgcggcctcg atcttctggc ggttgcgcac gatgctggga tcctgcatca
     1501 gcttctcgac ggtccgcggc gtgaagcgcg ccaccttgac ggggtcgaag tcggcgaacg
     1561 cgcgccgata cccttcgcgc ttgcgcagaa tcgtccacca ggagaggccg gcttgcgcgc
     1621 tctcgagcac caggaactcg aagtgcacgc ggtcgtcgcg gacgggcacg ccccattcgt
     1681 cgtcgtgata gcgcgcgtag gcgggatcga tgccctcgct ccaaggacac cgcacgagct
     1741 cgttcttctg cgccaccccg agacctccgt tgctgcgacg ggctcaaggt acacgtaaac
     1801 ggatcggttt ccctagcggc gaaactgccc gctcgacgca gaatctcgag accttcaggg
     1861 cacccctacc atgcccctga tcggctgaac gagccgccag tcgatgcgcc gccagcgccg
     1921 gaccgcgagc gcacgaaaca acgcggcgcc gagcagctga gctgcgacga tgattgccac
     1981 agaggcaacg gcgggatcgg cacgcgcgat caacgcgagc tgcgcgacgc tcatgagacc
     2041 gaaaccgacg agctgcgtct tgatccccgg cacggcggac aaggccacgt agacgccgta
     2101 gatcgcggcc gacgcgcaca ccgcaaggcc caaggccacc tcgcgcgcag agggcccgag
     2161 cgggacgatc acgatcaatg cggtcgtcat ggtcacggcg agggccgcga caccattgcg
     2221 ccacgcggct cgctcgatca accgacggat gtcgtcgcgg ccacctccga ccatgagcca
     2281 tagcaaacga gattggccca cgatgcggcc ggcgacggca ccggcgatcg ccatgcagca
     2341 gaacggccag atgaagctcg tcaggaacgg catccggccg agcttgggca gcatcagcac
     2401 cgtcaggacc agcaacgcga tgccgatcgc accgccaccc ccaaccgcga cgaggaacgg
     2461 gcggaagagg ctcggctgac cgttccacgc gagcatcgcg cggatcgccc ccgcgcgcgt
     2521 ggggaagtct gtccacggac gcacctctcg cctcgcggcc gccgtcaaca tcaacgggcg
     2581 tacgagccgc acgcgcgagt accaaacccc gaaggccgcc catgcgagcg aggcaacggt
     2641 cgccacgggc cacaacggca acgtgtccgc gtcggtcgag cccggtcccg tgcgcagcag
     2701 catgaccacg ccgagcggca gcagcagata cgcggatccc caccgccagt cgcccgagaa
     2761 caggaacacc catatgaata ccgcagtgac gaaaccgaac ggatagacga gcaccgcggc
     2821 cggcagggca cggccctcga gcagagcggg caccgcgagc acggccgcga accacaagat
     2881 cgacgaagcc gcgagcaaag ctgtggcaag cagcatccgc gcgcggaaat gcgggaagag
     2941 ctgatggctg cgcggcgccg atagcgcgcg gaacagggcg gcgcctgcaa acaccgcagg
     3001 aaacgccgcg agaaccgtga acgtcgccgc cactaagagg tatacggcgt ccggcgcctc
     3061 gagccagaaa ccgccggcga tcaaaatgct gcacagcacg acgccggtga ccgcaagcca
     3121 acgctgcaac ggaaacgccg tgtagaacag ccaaaagacg cgcagcacgg cgctcaccga
     3181 ttcagctcca cgaagatctg ctcgaggccg agcggctcga cttcgacggc agcatctagg
     3241 ctgcgtgcca gcgctccggc acgctcttcg cgccaccgcg agatcgcgac cgtcgccgtc
     3301 acgccctcga tgcgaaccgc gagcgcatcc gggatcgaga aatcacgggg caacggcgct
     3361 cgcgcgcgga tgtgcagccg cacgaccgac tctttgagcg tgtcgacgtc accctgccaa
     3421 tgcaaccggc cgtccttgat gacccagacc ttgttcgcgg cgcgctcgag atccgagacg
     3481 atatgcgacg agaacagcac agtgcgcgtc ttcgcctcgg gcatctcgaa cagctccgcg
     3541 aggaattgcc gccgcgcgat cggatccaag ctcgcgaccg gctcgtcgag cacgagcagc
     3601 tccggacgat ggccgagcgc cgtgaggacc gagagcttct gccgttcccc gatcgacaac
     3661 gtcagcatcc gtcgatcgag cgggacggac cactcgttca ccaaacgatc gatcagcgcg
     3721 cgatcccagc tcgcatggaa cgcggccgtg accgcgagct gctgccgacc gctcagcatc
     3781 ccgagcagct cgtcctgctg cggcac
//
LOCUS       DATCUD010000159         2174 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8625, whole genome shotgun sequence.
ACCESSION   DATCUD010000159 DATCUD010000000
VERSION     DATCUD010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8625"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VIQ99_02260"
     CDS             complement(<1..455)
                     /locus_tag="VIQ99_02260"
                     /inference="COORDINATES: protein motif:HMM:NF025268.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY9181992.1"
                     /translation="MQIPGFMVRALAALAARPWSWLGGFVAVALGVGVVLSFSIEPRL
                     APVPEVAVLNPPYRSDVDARTAVDAGKARAAANGKILMVTFGANWCPDCLTLWGSLRE
                     SDCRDYVEKHFELVSIDVGDAEHSAAVKRDLGIDVNVIPLAVFYSPDGER"
     gene            complement(539..1192)
                     /locus_tag="VIQ99_02265"
     CDS             complement(539..1192)
                     /locus_tag="VIQ99_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEY9181993.1"
                     /translation="MISAIKALELLKDGNRRFVADRERDARVGATRRNELTERQEPFA
                     IVLGCSDSRVPAEIVFDQGLGDLFVIRVAGNIVAPSQIGSVEFAAERFHTRLVVVLGH
                     SGCGAIEATLDQLKRPAGKQSRNLRAIVDRVRPSVEPLLTTDLRHDQPTLMQSAVRAN
                     VRASAGHLRHGSDLLEQLIARDGLLVVGAEYSLETGVVDFFDGLPSERKRARARKGR"
     gene            complement(1189..1671)
                     /locus_tag="VIQ99_02270"
     CDS             complement(1189..1671)
                     /locus_tag="VIQ99_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019840475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEY9181994.1"
                     /translation="MTKLKESRFENGRPMLFAGIRRHHAFASVGDGITRQWRDFEKLG
                     TLPGQVGTTAYGAICGADTKAQTIEYMCAFEVASFEGLPKELGRMRVPAARYAVFRHD
                     GNVATVRATWDRIFKEWLPSSGFRSNETPDFEVYGERFDPQTGDGGIEIWVGIAGDAQ
                     "
     gene            complement(1721..2107)
                     /locus_tag="VIQ99_02275"
     CDS             complement(1721..2107)
                     /locus_tag="VIQ99_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181995.1"
                     /translation="MLSDAEWHALMNLAMAASYDPDPKAPNGFRVPYHLETGELLPRR
                     WRRWQSHDPVNLVARYARELRTLRGIYIDCGWRDQYRIHYGSRLLSLRLAQHRVRHVY
                     EEFDGTHSGIDYRMNTSLPFLYRALK"
BASE COUNT          378 a          751 c          694 g          351 t
ORIGIN      
        1 cgctcgccat ccggcgaata gaacaccgcg agcggaatca cgttcacgtc gatgccgaga
       61 tcgcgtttaa ctgccgcgct gtgctccgca tcgccgacgt cgatgctcac gagctcgaag
      121 tgcttctcga catagtcgcg acaatcggat tcgcgtaggc tgccccagag cgtcaagcag
      181 tccgggcacc agttggcgcc gaacgtgacc atcagtatct tgccgttcgc agccgcgcgc
      241 gctttgccgg catcgaccgc cgtgcgtgcg tcgacgtcgg atcggtacgg cggattcagc
      301 acggcgacct cgggaaccgg cgcgagcctg ggctcgatgc tgaagctcaa cacgacgccg
      361 accccgagcg cgacggcgac gaagccgccg agccacgacc aaggccgcgc cgcgagggcc
      421 gcgagggcgc ggaccatgaa accggggatc tgcatgacga tcacattaca ccccgctccc
      481 ggccgcgtca tggcagacag tccgaagaac tcccaagcat ggctcggtca gccgggcgtc
      541 agcggccttt ccgggctcga gcgcgcttgc gttcggaggg aagcccgtcg aagaaatcga
      601 cgacgccggt ctcaagcgag tattcggcgc cgacgacgag cagcccgtcg cgcgcgatca
      661 gctgctcgag cagatccgag ccgtgccgca agtggcccgc agatgcgcgc acgttcgcgc
      721 ggacggcgct ctgcatcagc gtcggttgat cgtggcgcag atccgtcgtc agtaacggct
      781 ctaccgacgg gcgcacgcga tcgacgatcg cccgcagatt ccgcgactgc tttccggcgg
      841 gccgcttgag ctgatccagc gtcgcctcga tcgcgccgca gccggaatgc ccgagcacga
      901 cgacgagccg cgtgtggaag cgctcggccg cgaactcgac gctgccgatc tgcgacggcg
      961 cgacgatgtt gccggccacg cgaatcacga acaggtcacc gaggccttga tcgaatacga
     1021 tttcggccgg cacgcgcgaa tccgagcaac cgagcacgat cgcgaacggc tcctgccgct
     1081 cggtgagctc gttgcgacgc gtagcgccga cgcgagcgtc ccgctctcga tcggcgacga
     1141 agcgccgatt gccgtccttc agcaactcga gcgccttgat cgccgagatc attgggcgtc
     1201 tccggcaatg ccgacccaga tctcgattcc gccgtcgccg gtctgcggat cgaagcgctc
     1261 gccgtagacc tcgaaatccg gcgtttcgtt cgagcgaaaa cccgagctcg gcagccattc
     1321 cttgaagata cggtcccacg tcgcccgtac cgtcgccacg ttgccgtcgt ggcgaaacac
     1381 cgcgtagcgt gccgcgggga cgcgcatgcg gccgagctct ttcggcaagc cctcgaacga
     1441 cgcgacctcg aatgcgcaca tgtactcgat cgtctgcgcc ttcgtgtcgg cgccgcagat
     1501 cgcgccgtac gcggtcgtgc caacttgccc cggcaacgtg ccgagcttct cgaagtcgcg
     1561 ccactgccgc gtgatgccgt cgccgacact cgcgaacgcg tggtgacggc ggatgcccgc
     1621 gaacagcatc gggcgcccgt tctcgaagcg cgactctttg agcttggtca aactcggtct
     1681 cctcccgcgg cggccaggat atgcgacgac atcgttctcg tcacttcagc gcgcggtaca
     1741 ggaacggcag gctcgtgttc attcggtagt cgatgccgga gtgcgtgccg tcgaactcct
     1801 cgtacacgtg ccgaacgcga tgctgtgcga ggcgcagcga caacagccgg ctgccgtaat
     1861 ggatccgata ctgatcgcgc caaccgcagt cgatgtagat gccgcgcagc gtgcgcagct
     1921 cgcgcgcata acgcgcgacg aggttcacgg ggtcgtggct ctgccagcgt cgccagcgcc
     1981 gcggcaacag ctcccccgtc tcgaggtgat acggcacgcg gaagccgttc ggcgccttcg
     2041 ggtccgggtc gtagctcgcc gccatcgcga gattcatcaa cgcatgccat tcggcgtcgc
     2101 tgagcacatt cttcttccaa cgtgactcaa gaaacgcgcg atgcggccgt cgtcggcgcc
     2161 cgagttaccg gcgg
//
LOCUS       DATCUD010000160         2542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86873, whole genome shotgun sequence.
ACCESSION   DATCUD010000160 DATCUD010000000
VERSION     DATCUD010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86873"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..217)
                     /locus_tag="VIQ99_02280"
     CDS             complement(<1..217)
                     /locus_tag="VIQ99_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9181996.1"
                     /translation="MSQAQEQIKNRGIRQVLTSVGEVRSAVIQVVGVATRTLSILTHD
                     LEPEVYDHDDFLETLKKFILARTFARVR"
     gene            complement(313..1683)
                     /gene="purB"
                     /locus_tag="VIQ99_02285"
     CDS             complement(313..1683)
                     /gene="purB"
                     /locus_tag="VIQ99_02285"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015447442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEY9181997.1"
                     /translation="MDSSTLLALSPLDGRYARKAAPLREYLSEYALIRYRTLIEVRWL
                     QHLADEPAIAELPPLEAPQKDVLNKIVDGFSVDDASRIKALEAKTNHDVKAVEYFLRQ
                     KLEGVDNGSGRLASFIHFACTSEDINNLAYALMLRDARQRVLLPMLRELGVALRELAH
                     RFADVPMPARTHGQPATPTTLGKEIANFVSRLQRQTELFAAVRIDGKLNGAVGNHNAH
                     VAAYPNADWIAITDRFLDSLGVTAARYTTQIEPHDWIAEYCQALTRGNTVLIALARDF
                     WGYISLGYFRSRPVAGEVGSSTMPHKVNPFDFENAEGNLGLANELLGFLASKLPVSRW
                     QRDLTDSTVLRNLGVALGHTLISLEALKLGLGKLEADTAAIAADLANRWEVLAEAIQT
                     VMRRHGLPDAYEQLKELTRGRAIDANTLREFVSRLDIPPAERSRLLALDPSSYTGLAA
                     ELARRI"
     gene            1790..>2542
                     /locus_tag="VIQ99_02290"
     CDS             1790..>2542
                     /locus_tag="VIQ99_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HEY9181998.1"
                     /translation="MAADFRVERDSMGELQVPASALWGAQTQRAVNNFSISGLTMPAA
                     FIRALALVKWAAAHTNRSLGLLPDPIAGAIEASALKIANGLHAEQFPIDVFQTGSGTS
                     SNMNANEVIAKLATQALGSPVHANDHVNMSQSSNDSIPSAIHIAAALELKGKLLPALE
                     HLIATIDAKAKEIAGIVKTGRTHLMDAMPVRLDQELGGWSAQILSNIFRLRGTLPRLT
                     GLAQGGTAVGTGINAHPEFAARFNAALAKRTGV"
BASE COUNT          445 a          801 c          855 g          441 t
ORIGIN      
        1 cgcgcacgcg cgcaaaggtt cgcgcgagga tgaacttctt caacgtctcg agaaagtcat
       61 cgtgatcgta gacctccggc tcgaggtcgt gggtcaggat cgacaacgtg cgcgtcgcga
      121 caccgacaac ctgaatcacg gccgagcgaa cttcgccgac gctggtcagc acctggcgga
      181 tgccccgatt cttgatctgc tcttgggcct gtgacatagg tgctatatcg gcttcctgag
      241 gagtttactt aacccctcgc gggcggctgt gccgccggtc acgtttttcg gggcggcgcg
      301 acgcgcggtg cgtcagattc ggcgtgcgag ctccgcggcc agacccgtgt aggacgaggg
      361 atcgagcgcg agcaaacggg accgctcggc cgggggaata tcgagccggg aaacgaactc
      421 ccgcagggtg ttggcgtcga tcgcccggcc acgcgtgagc tccttgagtt gctcgtacgc
      481 gtccggtaaa ccgtggcgcc gcatcacggt ctggatcgct tccgcaagca cttcccagcg
      541 attcgcgaga tcggccgcga tcgcagccgt atccgcttcg agcttcccga gccccaactt
      601 cagagcctcg agggagatca gcgtgtggcc gagcgcgacg ccgagattac gcagcaccgt
      661 ggagtcggtc aggtcgcgct gccagcgcga gaccggcagc ttgctcgcga ggaacccgag
      721 cagctcgttc gccagcccaa gattgccctc ggcgttctcg aagtcgaacg gattcacctt
      781 gtgcggcatc gtcgacgatc cgacctcgcc ggccacgggg cgcgagcgga agtagcccaa
      841 gctgatgtag ccccagaagt cgcgcgccag ggcgatcagc accgtgttgc cgcgagtcag
      901 cgcttggcag tactcggcga tccagtcgtg cggctcgatt tgtgtcgtgt agcgtgccgc
      961 tgtcacgccg agggaatcga gaaagcggtc cgtgattgcg atccagtcgg cattcgggta
     1021 agccgcgacg tgggcgttgt ggttgccgac ggcgccattg agcttgccgt cgatgcgcac
     1081 cgcggcgaac aactcggttt ggcgctgcag gcgggagacg aaattcgcga tctccttgcc
     1141 caacgtcgtc ggcgtggccg gctggccgtg cgtgcgcgcg ggcatcggca catcggcgaa
     1201 ccgatgcgca agctcgcgca gcgcgacgcc gagctcgcgg agcattggca acagcacgcg
     1261 ctgacgcgcg tcgcgcagca tcagcgcata cgcgaggttg ttgatatcct cggacgtgca
     1321 ggcgaagtga atgaagctcg cgagtcggcc ggagccgttg tcgacgcctt cgagtttctg
     1381 ccgcagaaag tattcgacgg ccttgacgtc gtggttcgtc ttcgcctcga gcgctttgat
     1441 gcgcgaggcg tcatctacgc tgaacccatc gacgattttg ttcagaacgt ccttttgcgg
     1501 ggcctcgagc ggcggcagct ctgcgatcgc gggctcgtcg gcgagatgct gcagccagcg
     1561 cacctcgatc aacgtgcggt agcggatcag cgcgtattcg gagaggtact cgcgcagcgg
     1621 cgcggccttg cgcgcatacc gtccgtcgag cggcgaaagt gcgaggagcg tagaggagtc
     1681 caacggaccg ccgaagccta tacaagcgtt ttcggagtcc gcatcataca ccgcgggtcc
     1741 ggctttggcg ggcccgttca atccaggccc gttcaattca ggagaccgca tggcggccga
     1801 ttttcgtgtc gagcgcgaca gcatgggcga gctacaggtg cccgcgtcgg cgttgtgggg
     1861 tgcgcagacg cagcgcgcgg tcaataactt ttcgatcagt ggcctcacca tgccggccgc
     1921 gttcattcgg gctttggcgc tcgtgaaatg ggctgccgcg cacacgaatc gcagcctggg
     1981 tctgttgccg gatccgatcg cgggcgccat cgaggcaagc gcgctgaaga ttgcgaacgg
     2041 cctgcacgcg gagcagtttc cgatcgacgt gttccagacc ggctcgggaa cgagctcgaa
     2101 catgaacgcc aacgaggtca tcgcgaagct cgcgacgcag gcgctcggct ctcccgtgca
     2161 cgcgaacgac cacgtgaaca tgagtcagag cagcaacgac tcgatcccgt cggcgatcca
     2221 cattgccgcg gccctcgagc tcaaaggcaa gctgttgccc gcgctcgagc atctgatcgc
     2281 gacgatcgac gctaaggcta aagagatcgc cggtatcgtg aaaacgggcc ggacgcacct
     2341 gatggacgcg atgccggtcc ggctcgatca ggagctcggc ggctggtcgg cgcagatctt
     2401 gagcaacatc ttccggctgc gcggcacgct gccgcggctc acgggcctcg cgcagggcgg
     2461 cacggcggtc ggcaccggca tcaacgcgca cccggaattc gcggcgcgct tcaacgcggc
     2521 gctcgcaaag cgcaccggcg tc
//
LOCUS       DATCUD010000161         1712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101003, whole genome shotgun sequence.
ACCESSION   DATCUD010000161 DATCUD010000000
VERSION     DATCUD010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101003"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..>1712)
                     /locus_tag="VIQ99_02295"
     CDS             complement(64..>1712)
                     /locus_tag="VIQ99_02295"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9181999.1"
                     /translation="PAPRPTGLLVRGTVENFVPVTDQMLKDQADGDWLMIRRDYSATS
                     FSPLSEIDAGNVSRLQLKWIWPMRDGGSNQPAPLVHDGTIYINNTDGVVQAIDGRDGS
                     LIWEYRVDAAIAMRGIALYEDKLFFQSNAHLIALDARTGELIWDVVMPDVRSSSSGPI
                     VANGLILEGMGGCSRYEEQKCFISAYDADTGEQRWRFRTIALDGEPGGDSWGDLSNLY
                     RAGGETWITGSYDPVLNLTYWGTAQAKPWMPASRGMGSRDVGLYTNSTVALDASTGKL
                     AWHYAHAPGEALDLDVVFERVLVDDGDEKWVFSAGKDGVLWKHDRRNGTYLGHVETLF
                     QNVWASFDRETGTPRYRDDILEHKVGEWIDGCPSTEGGKNWQAMSFHAPSRRLIIPLS
                     QSCIAIRAQAIAQTPGGGSAGGADRRFYEMPGTDGNVGRLAAFNVDTLEEEWAIQQRA
                     PFLTGVLSTAGGVAFVGDLDRVFKAVDVRNGRILWQTRLATSVQGFPVSFEVDGRQYV
                     AVTTGLGGGSPRLVPSLIVPEVQPPTRGHALYVFALPEER"
BASE COUNT          263 a          591 c          561 g          297 t
ORIGIN      
        1 tcgagcccgc gcgacccgag cccggcctaa ccgcggagtt tgctgcgggt cctcgagttg
       61 cgctcagcgt tcctcgggca gcgcgaacac gtacagcgcg tgaccccgcg tgggcggctg
      121 gacttccggc acgatcaacg agggcaccag gcgcgggctt ccgccgccga gcccggtcgt
      181 cacggcgaca tactggcgcc cgtcgacctc gaagctgacc gggaaaccct gcacggaggt
      241 tgcgagccgc gtctgccaca gaatacggcc gttgcggacg tccacggcct tgaacacgcg
      301 atcgagatcg ccgacgaacg cgacgccgcc ggccgtcgaa agcacgcccg tcaggaacgg
      361 cgcgcgttgt tgaatcgccc actcttcctc gagggtgtcc acgttgaacg ccgcgaggcg
      421 gccgacgttg ccgtcggtgc ccggcatctc gtagaagcgc cgatctgcac cgccggcgct
      481 gccgccaccc ggcgtctggg cgatggcctg tgcgcgaatc gcgatgcagc tctggctgag
      541 cgggatgatg aggcgccgcg aaggcgcgtg gaagctcatc gcctgccagt tcttaccgcc
      601 ctcggtgctg ggacatccgt cgatccactc gccgaccttg tgctccagga tgtcgtcgcg
      661 gtagcgcggc gtgccagtct cacggtcgaa gctggcccag acgttctgga acagcgtttc
      721 gacgtgcccg aggtacgtgc cgttgcgccg gtcgtgcttc catagcacac cgtccttgcc
      781 ggccgagaac acccatttct cgtcaccgtc gtcgacgaga acgcgttcga acacgacgtc
      841 gagatcgagc gcctcgccgg gggcgtgagc gtagtgccac gcgagcttgc ccgtgctcgc
      901 gtcgagcgcg accgtcgagt tcgtgtagag cccgacgtct cgcgacccca tgccgcggct
      961 tgcgggcatc cacggctttg cttgtgccgt gccccaataa gtaaggttca gcacgggatc
     1021 gtagctgccg gtgatccacg tttcgccgcc ggcgcgatac aggttcgaca ggtcgcccca
     1081 gctgtcgccg cccggctcgc cgtcgagcgc gatcgtgcgg aagcgccagc gctgctcgcc
     1141 ggtatcggca tcgtaggcgc tgatgaagca cttctgctcc tcgtatcgcg agcagccgcc
     1201 catgccctcg aggatgaggc cgttcgcgac gatcggcccg ctgctgctcg agcgaacgtc
     1261 cggcatcacg acatcccaaa tgagctcgcc cgtgcgtgcg tcgagcgcga tcaagtgcgc
     1321 gttgctctgg aagaacagct tgtcctcgta cagcgcgatg ccgcgcatcg cgatcgcggc
     1381 gtccacgcga tactcccaga tcaggctgcc gtcgcgaccg tcgatcgcct gcacgacgcc
     1441 gtcggtgttg ttgatgtaga tcgtcccgtc gtgcacgagc ggcgcgggtt gattcgagcc
     1501 gccgtcgcgc atcggccaga tccactttag ctgcaggcga ctcacgttgc ccgcatcgat
     1561 ctccgagagc gggctgaagc tcgtcgcgct gtagtcgcgg cggatcatca gccagtctcc
     1621 gtcggcctga tccttgagca tctgatccgt aaccggcacg aagttctcga cggtgcctct
     1681 gacgagcaga cccgtcggcc gcggcgcggg gg
//
LOCUS       DATCUD010000162         2514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_15920, whole genome shotgun sequence.
ACCESSION   DATCUD010000162 DATCUD010000000
VERSION     DATCUD010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15920"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..530
                     /locus_tag="VIQ99_02300"
     CDS             <1..530
                     /locus_tag="VIQ99_02300"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEY9182000.1"
                     /translation="TRGPKPKRALRELGLTAEHSATEPTTAGLVATARTIPLPLRRVA
                     IQLYSESQDPELRDDLERRGVETDCVAPYVYASAADDDRVAELIGTLADGGIAAVAFT
                     SKAQVARLFDVARERGLESKLRAGLERTRIAAVGPVVSADLEAADIRVDAMPAESYSM
                     KPLVTSLCELLGRRS"
     gene            complement(527..1021)
                     /locus_tag="VIQ99_02305"
     CDS             complement(527..1021)
                     /locus_tag="VIQ99_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HEY9182001.1"
                     /translation="MALIKNGELVASSFVDVSGADAIPPAGPVIVSLAQWQAQREALL
                     ARGTPLGIRLHSDQPPELVAADLPHFSVVALEFPKFRDGRAYSYARLLRERYGYKGEL
                     RAVGEVLLEQLFFMLRTGFDAFELTSQDPVGDYRTALADFSVWYQPTADGRPTAIQLR
                     HRKR"
     gene            complement(1021..>2514)
                     /locus_tag="VIQ99_02310"
     CDS             complement(1021..>2514)
                     /locus_tag="VIQ99_02310"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HEY9182002.1"
                     /translation="PYGTLASKQMRKFAYLARNYDKNFGHFTTRQNLQFNWIKLEQVP
                     DILQHLADVEVTGIQSSGNCVRNITADQYAGRAKDELADPRVYCELLRQYSFLHPEFS
                     YLPRKFKIAVTGSPNDRAAVAVHDIGLRMHKNEQGRIGFEVLVGGGLGRTPYIAHTIR
                     KWLAPEDLLAYVESILRVYNMQGRRDNIHKARIKIIVNQMGIDKYRELVDQDFEFTKN
                     GALKVPDEEVARIDAYFAPPKYETLADQTETLAKLRATDKAFDRWLRGNVVEHKVPGY
                     AIVNISLKAPGKAPGDITADKMDAVADLADRYSFGEIRVTHRQNLVLVDVKQSELHEL
                     WQKLAALELATPNLGLLTDIICCPGLDFCSLANARSIPIAQDISRAFTDLDELQKIGQ
                     FTINISGCMNACGHHHVGHIGILGVDKRNEEFFQLTLGGSSDQHASLGDRLGPGLPQS
                     QVPAAIRKIVDTYLVTRQHGERFLDTYRRVGIEPFKNAVYGDQSQAA"
BASE COUNT          427 a          815 c          824 g          448 t
ORIGIN      
        1 tgacgcgcgg cccgaagccg aagcgcgcac tgcgcgagct cggtctgacg gccgagcact
       61 ctgccaccga gccgacgacg gccgggctcg tggcaaccgc gcgcacgatt ccactcccgc
      121 tgcggcgggt cgcgattcag ctgtacagcg agagccagga tcccgagctc cgcgacgacc
      181 tcgagcggcg tggcgtcgag accgattgcg tcgcgccgta tgtgtacgcg tctgcggccg
      241 acgacgaccg agtcgcggag ctgatcggca cgctcgccga cggcggaatc gccgccgtcg
      301 cgttcacgag caaagcccaa gtggcacgcc tcttcgacgt cgcacgcgag cggggcttgg
      361 agtccaagtt gcgtgccggt ctcgagcgga cgcgaatcgc cgccgtggga cccgtcgtga
      421 gcgcggacct cgaggccgcc gacatccgcg tcgacgcgat gccggccgaa agctattcga
      481 tgaaaccgtt ggtcacgagc ctctgcgagc tgctcggccg ccgaagctag cgcttgcgat
      541 ggcgcagttg aatcgctgtc gggcggccgt ccgcggtcgg ttgataccac accgagaaat
      601 ccgcgagcgc cgtgcgatag tcgccgaccg ggtcctggct cgtcagctcg aacgcgtcga
      661 aacccgttcg caacatgaag aacagttgct cgagcaacac ctcgccgacg gcccgcagct
      721 cgcccttgta gccgtatcgc tctcgcagca agcgcgcgta cgagtacgca cgaccgtcgc
      781 gaaacttcgg gaactccaac gcgaccacgg aaaaatgtgg caggtcggcc gcgacgagct
      841 cgggcggctg atcgctatgg agcctgatac cgagcggagt gccgcgcgcg agtagcgctt
      901 cgcgttgcgc ttgccactgc gccaggctca cgatcacggg cccggccggt gggatcgcgt
      961 cggccccgct cacgtcgacg aacgagctcg ctacgagctc cccattcttg atcagcgcca
     1021 tcaggcggcc tggctctggt cgccgtagac ggcgttcttg aacggctcga tgccgacccg
     1081 gcggtaggtg tctaggaagc gctcgccgtg ctgccgagtc acgagatacg tatcgacgat
     1141 cttgcggatc gccgccggca cctgagactg cggcaggccc ggcccgaggc ggtcgccgag
     1201 cgacgcgtgc tgatccgacg agccgccgag cgtgagctga aagaactcct cgttgcgttt
     1261 gtccacgccg aggatgccga tgtggcccac gtgatggtga ccgcaggcgt tcatgcagcc
     1321 cgagatgttg atcgtgaatt gcccgatctt ctgcagctcg tccaaatcag tgaacgcgcg
     1381 gctgatgtcc tgggcaatcg ggatcgaccg agcgttcgcg agcgagcaaa agtcgaggcc
     1441 ggggcagcag atgatgtcgg tcaacaaccc caagttcggc gtcgcgagct cgagcgccgc
     1501 gagcttctgc cagagctcgt ggagctcgga ctgcttgacg tccacgagca cgagattctg
     1561 ccggtgagtc acgcgaatct cgccgaagct atagcggtcc gcgagatctg cgacggcgtc
     1621 catcttgtcg gccgtgatgt ctccgggcgc cttgccgggc gccttcaacg agatattcac
     1681 gatcgcgtag cccggcacct tgtgctcgac cacgttgccg cgcagccagc ggtcgaacgc
     1741 tttgtccgta gcgcgcagct tcgcgagcgt ctcggtttga tccgccagcg tctcgtactt
     1801 cggcggcgcg aagtacgcat cgatgcgcgc gacctcctcg tcgggcacct tcagagcgcc
     1861 gttcttcgtg aactcgaagt cctggtcgac gagctctcga tacttgtcga tgcccatctg
     1921 attcacgatg atcttgatgc gcgccttgtg aatgttgtcg cgccggccct gcatgttgta
     1981 cacgcgcagg atcgattcga cgtaggcgag caagtcctcc ggtgcgagcc acttgcgaat
     2041 cgtatgggcg atgtacggcg ttcggcccag gccgccgccg acgagcacct cgaagccgat
     2101 tcggccctgc tcgttcttgt gcatgcgcaa gccgatgtcg tggacggcca cggccgcgcg
     2161 gtcgttcggc gagcccgtaa ccgcgatctt gaacttgcgc ggcagatacg agaactcggg
     2221 gtgcaggaat gagtactgcc gcagcagctc gcagtagacg cgcgggtcgg ccagctcgtc
     2281 cttcgcgcgg ccggcgtatt gatccgcagt gatgttgcgc acgcagttgc ccgacgactg
     2341 gatgcccgtg acctcgacgt cggcgagatg ctgcaggatg tcgggcacct gctcgagctt
     2401 gatccaattg aactgtaagt tctggcgcgt cgtgaaatgg ccgaagttct tatcgtaatt
     2461 gcgcgcgagg tacgcgaact tacgcatctg cttcgacgcc aacgtcccgt acgg
//
LOCUS       DATCUD010000163         1832 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86896, whole genome shotgun sequence.
ACCESSION   DATCUD010000163 DATCUD010000000
VERSION     DATCUD010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86896"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VIQ99_02315"
     CDS             <1..787
                     /locus_tag="VIQ99_02315"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182003.1"
                     /translation="RTAAKAERWCAQYGGKPAATPADAAQGAEIVFSCVGDDPDLREI
                     ALGAGGVIAAMRPGSIFVDHTTASAEVAREIAAAGTKRGVQCLDAPVSGGQAGAENGK
                     LTVMVGGEAEPFATAEPVIRSFAHAVRLIGPAGSGQLTKMVNQIAIAGVVQGLAEALN
                     FARKARLDVATVIDTISKGAAQSWQMENRWKTMSEGKFDFGFAVEWMRKDLRICLQEA
                     RNNGAELPVAALVDQFYADVVGMGGKRWDTSSLIARLNRHEKK"
     gene            792..1655
                     /gene="tesB"
                     /locus_tag="VIQ99_02320"
     CDS             792..1655
                     /gene="tesB"
                     /locus_tag="VIQ99_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018973761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006637 - acyl-CoA metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HEY9182004.1"
                     /translation="MRPILADLLRLLKLERIEERIFRGESRDLGGARVFGGQVLGQAL
                     TAASYTVTGRQVHSLHAYFLVAGDVDAPIVYEVDVARDGKSFSNRRVVAIQHGQPIFN
                     MTASFQVPEHGIEHAAAMPDVPGPEGLADVRELPPDVLAKVPDKMRRFLTHERPFEFR
                     PVEPVHVIAPPRAEPKRHIWIKTIDRLPDDPDLHRNVLAYVSDYQLVSTATLPHGIHF
                     AEGNVQLASIDHAMWFHRSFRMDDWLLYAMESPNASGGRGFALGKVFTRDGRLVASTA
                     QEGVVRVWSPR"
     gene            1677..>1832
                     /locus_tag="VIQ99_02325"
     CDS             1677..>1832
                     /locus_tag="VIQ99_02325"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY9182005.1"
                     /translation="MNWSDIAAAAATLFFVMDPIGNIPVFNAVLSKFEPRRRAAITAR
                     ELVFALVI"
BASE COUNT          297 a          592 c          653 g          290 t
ORIGIN      
        1 ccgcaccgcg gcgaaggccg agcgctggtg cgcgcaatac ggcggcaagc cggccgcgac
       61 gcccgcggac gcggcgcagg gcgccgagat cgtgttcagt tgcgtcggcg acgaccccga
      121 tctgcgcgag atcgcgctcg gcgccggcgg cgtgatcgca gcgatgcgcc cggggtcgat
      181 cttcgtcgat cacacgacgg cctcggccga ggtcgcgcgc gagatcgcgg cggccggcac
      241 gaagcgcggc gtgcagtgtc tcgacgcgcc ggtgtcgggc ggccaggccg gcgccgagaa
      301 cggcaagctg accgtgatgg tcggcggcga agccgagccg ttcgcgaccg cggagcccgt
      361 gatccgctcg ttcgcgcacg cggtgcggtt gatcggcccc gcgggctcgg gccagctcac
      421 gaagatggtc aaccagattg cgatcgccgg agtcgtgcaa ggtctcgccg aggcactgaa
      481 cttcgcgcgc aaggcgcggc tcgacgtcgc gaccgtgatc gacacgatat cgaaaggcgc
      541 ggcgcaatcg tggcagatgg agaaccgttg gaagacgatg agcgagggca agttcgattt
      601 tggctttgcc gtcgagtgga tgcgcaagga cttgcggatc tgtctccaag aagcgcgcaa
      661 caacggcgcg gagctgccgg tcgccgcgct cgtcgatcag ttctacgccg atgtcgtcgg
      721 tatgggcggt aagcgttggg atacgtcgag cctgatcgcg cgcctgaatc gccacgagaa
      781 gaaataactc cgtgcggccg atcctcgccg atctgcttcg cctgctgaag ctcgagcgca
      841 tcgaggagcg gatctttcgc ggcgagagcc gcgacttggg tggcgcacgc gtgttcggcg
      901 ggcaggtgct gggccaagcg ctgacggccg cgagctacac ggtcacggga cgccaggtac
      961 attcgttgca cgcgtacttc ctggtcgcgg gcgacgtcga cgcgccgatc gtctacgagg
     1021 tcgacgtcgc gcgcgacggc aagagcttca gcaaccgccg cgtcgtcgcg attcagcacg
     1081 gccaaccgat cttcaacatg accgcgtcgt tccaggttcc ggaacacggg atcgagcacg
     1141 ctgcggcgat gccggacgtg ccggggcccg aagggctcgc cgacgttcgc gagctgccgc
     1201 ccgacgtgct cgcgaaggtt cccgacaaga tgcggcggtt cctcacgcac gaacggccgt
     1261 tcgagttccg ccccgtcgag ccggtccacg tgatcgcgcc gccgcgcgcg gagccgaaac
     1321 gccacatctg gatcaagacg atcgacaggt tgccggacga tcccgatctg caccggaacg
     1381 tgctcgcgta cgtgtcggat taccagctcg tgtcgacggc gacgctgccg cacggcatcc
     1441 acttcgcgga aggcaacgtg cagctcgcga gcatcgacca cgcgatgtgg ttccatcgtt
     1501 cgtttcgcat ggacgattgg ctcttgtacg caatggagag cccgaacgca tcgggcggta
     1561 gagggttcgc gctcggcaag gtgttcacgc gcgacggccg gctcgtggcg tcgacggcgc
     1621 aggaaggcgt cgtgcgcgtg tggtctccgc gctagcgggc acgaggaggg cgcgccgtga
     1681 actggtccga catcgccgcc gccgccgcga cactgttttt cgtgatggac ccgatcggca
     1741 acatcccggt cttcaacgcc gtgctgtcga agttcgagcc gcggcgccgg gctgcgatca
     1801 cggctcgcga gctcgtgttc gcgctcgtga tc
//
LOCUS       DATCUD010000164         1642 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94025, whole genome shotgun sequence.
ACCESSION   DATCUD010000164 DATCUD010000000
VERSION     DATCUD010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1642
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94025"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1642)
                     /locus_tag="VIQ99_02330"
     CDS             complement(<1..>1642)
                     /locus_tag="VIQ99_02330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182006.1"
                     /translation="GDVVFISSVIAGVGGTWTFRETLQRVRISNKSDKDIYINDIDVV
                     DESQPLVWLDSRDTGIGGTPGDMSFSIVQEVAPTLIEITNTGNSDVYINGTIENPIGT
                     TAILNSNGSVFATADRGVTTSGGPAGTANHQSMIRTHILRVDASENVGSGAERLNVDV
                     VDSDGLPEDIGFKSSQVGGASDEIVLGIQNQYVTGQLVQYNAAGTALGGLSDGGYYYT
                     IVSADGLRVALAATLTDAKAGNALDIEPTGTLTDAHTLTAKESFTVDADQNIFLDLKG
                     LKRQDSAFHIIDIDRINAGDTVDVLLQTSLVQSGAGTSAGVLVDFDDANPAAGEPHYT
                     FFDQNDGVAQPLSRGFFGQGNTQISATWDFRGRDPNRNGLYELAGLQSGSETDTGDII
                     VKAANTTVGAPMINVLAITEVAYTDAGTEEPVDDNGDITVETDGYIALTELNGDMRVE
                     RLLSTGSDVLLYSPQRIIDANHDVGPSVPADVSGVSITMVAASGKIGAPDFVNPDHAD
                     VAGEVVNPTVETRDGTSYGGIGRQQNFLEIDTNVAGGGG"
BASE COUNT          265 a          519 c          536 g          322 t
ORIGIN      
        1 cgccgccgcc accggcgacg ttggtatcga tctcgaggaa gttctgctgg cgtccgatgc
       61 cgccatagga cgtgccgtca cgggtttcca cggtcggatt gacgacctcg ccggcaacgt
      121 ccgcgtggtc gggattcacg aaatcgggcg cgccgatctt cccggaggcc gcgaccatcg
      181 tgatgctcac gccggacaca tccgccggca cactggggcc cacgtcatga ttggcgtcga
      241 tgatgcgctg cggggaatac agcagcacgt ccgagccggt cgacaggagc cgttccacgc
      301 gcatgtcgcc gttcagctcg gtgagcgcga tatagccgtc ggtctcgact gtgatgtcgc
      361 cgttgtcgtc gacgggttct tccgttcccg catccgtgta cgcgacttcg gtgatcgcaa
      421 gcacgttgat catcggggcg ccgaccgtcg tattggcggc cttgacgatg atgtcgcccg
      481 tatcggtttc cgagcccgat tgcaggccgg ccagctcgta caggccgttg cggttcgggt
      541 cgcgaccgcg gaaatcccag gtcgccgaaa tctgcgtatt accctggccg aagaaaccgc
      601 ggctcaaggg ctgtgccacg ccgtcgttct ggtcgaagaa cgtgtaatgt ggttcgccag
      661 cagcaggatt ggcatcgtcg aaatcgacca gcacgccggc cgaggtaccg gcaccggact
      721 gcacgaggct ggtctgcagc agcacgtcga cggtgtcgcc cgcgttgatg cggtcgatgt
      781 cgatgatgtg gaacgccgaa tcctggcgct tcaggccctt cagatcgaga aagatattct
      841 ggtccgcgtc gaccgtgaag gattccttcg cggtcagcgt atgcgcgtcg gtcagagtgc
      901 cggtcggctc gatatcgagc gcgttaccgg ccttcgcgtc ggtcagggtc gccgcgagcg
      961 cgacccgcag gccgtcggcg gaaacgatcg tgtagtagta gccgccgtcg ctcaggccgc
     1021 cgagcgccgt cccggccgcg ttgtattgca ccagttgacc ggtcacgtac tggttctgga
     1081 tgccgaggac gatctcgtcg ctggcgccgc cgacctggct cgacttgaag ccgatatcct
     1141 cgggcaagcc gtcgctgtcg acgacgtcga cgttcagccg ctcggcgccg gagccgacat
     1201 tctcgctcgc gtccacgcgc agaatgtgcg tgcggatcat cgactgatga ttcgcggtgc
     1261 ccgccggccc gcccgacgtc gtgacaccgc gatcggcggt cgcgaacacc gagccgttgc
     1321 tgttcaggat tgcggtcgtg ccgatcggat tctcgatcgt gccgttgatg tagacgtccg
     1381 agttgccggt attggtgatc tcgatcagcg tcggcgcgac ttcctgcacg atgctgaagc
     1441 tcatatcgcc cggagtgccg ccgatgccgg tatcacggga gtccagccag accagcggct
     1501 ggctttcatc gacgacgtcg atgtcgttga tgtagatatc cttgtccgac ttgttggaga
     1561 tcctgacccg ctgcaaggtc tcgcggaagg tccaggtgcc gccgacgccc gcgatcacgg
     1621 acgagatgaa caccacgtcg cc
//
LOCUS       DATCUD010000165         1834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_86935, whole genome shotgun sequence.
ACCESSION   DATCUD010000165 DATCUD010000000
VERSION     DATCUD010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1834
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86935"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /locus_tag="VIQ99_02335"
     CDS             complement(<1..642)
                     /locus_tag="VIQ99_02335"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY9182007.1"
                     /translation="MSVGCRLGIVLGGLLAAGALHATEVAVCTDRGRAVIELADDAAP
                     LQVANFLGYVDSGFYSGTVFHRAISGFVVQGGGVDRQLRPRATREPVANESRDGISNT
                     RGTVAAARLGDDPDSATAQFFVNLADNVQLDADRDLGFTVFGRVREGIEIFDEVSRLP
                     TEAAGPFRADVPMPLIAIKSIARLDEAALAAFPADGREAALKVAIAAATDDPPE"
     gene            complement(712..>1834)
                     /locus_tag="VIQ99_02340"
     CDS             complement(712..>1834)
                     /locus_tag="VIQ99_02340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182008.1"
                     /translation="GKLTGRVGRWNLGALSVRQDEFETIAPDNATVARATANLLEESN
                     VGMIVTEGNPGSNVANSLAGVDFRYRNSRLAGNKVVEVNAWLQESDTEDAIGDQSAYG
                     VRFAAPNNTGWRGDVGFTRLGESFEPGLGFLNRPGIQSLNFGTFYRHRPRDGLLRSIS
                     GGYDAERIELLNGELQSQEVDYRLLEVESQFGDALELEYSAEQEQLDEPFEIWDGIVL
                     PAGHYSFAAPSIGFETADQRKVWGGIEYRNGEFYDGDREEIAGEINWRPSGRLRTSLG
                     YEYNDVDLPEGSFIARLAFFTTDVAFSSHLSWVTRIQYDNASELVGINMRLHWIPEAG
                     REAYLVLNHNLEDSPTDVDDRFRSSTSEAVAKFAYTFRF"
BASE COUNT          301 a          607 c          613 g          313 t
ORIGIN      
        1 ttcgggcggg tcgtcggtgg cggccgcgat cgcgaccttc agggctgcct cgcgcccgtc
       61 cgccgggaac gcagccaatg cggcctcgtc gagtcgcgcg atcgatttga ttgcgatcag
      121 cggcatcggg acgtcggcgc gaaacggccc tgccgcttcc gtcggcagcc gcgagacctc
      181 gtcgaagatc tcgatgcctt ccctgactcg gccgaaaacc gtgaagccca agtcacggtc
      241 cgcatcgagc tgaacattgt ccgcaaggtt cacgaagaac tgtgcggtcg cgctgtcggg
      301 gtcgtcaccc aggcgtgcgg ccgcgacggt tccgcgcgtg ttgctgatgc cgtcgcgcga
      361 ctcgtttgcg acgggctctc gcgtggcccg cgggcggagc tgtcgatcga cgccgccgcc
      421 ctgcacgacg aagccgctga tcgcgcggtg aaacacggtg cccgagtaga acccggagtc
      481 cacgtagccc aaaaagttcg ccacctggag cggcgccgcg tcgtcggcga gctcgatcac
      541 ggcgcggccg cggtcggtgc acaccgcgac ctcggtcgcg tgcaacgcgc cggccgcaag
      601 cagccccccg agcacgatgc caagccggca acccacgctc atttacacgt ctcccccggg
      661 atctcgtggg aggcgagcat agcactgcgt cgttcgcacg cgccggcgtg gctaaaagcg
      721 gaacgtgtac gcgaacttcg ccacggcttc cgaggtcgag gaacggaagc ggtcgtcaac
      781 atcggtagga ctatcctcga ggttgtggtt cagcacgagg taggcttcgc ggccggcctc
      841 ggggatccag tgcagccgca tgttgatgcc gacgagctcg gaggcattgt cgtactggat
      901 ccgcgtgacc cagctcaagt gcgatgagaa cgcgacgtcg gtcgtgaaga acgcgagacg
      961 cgcgatgaag ctgccttccg gcaggtcgac gtcgttgtac tcgtagccga gggatgtgcg
     1021 taggcggccc gacggccgcc agttgatctc gcccgcaatc tcctcgcggt cgccgtcgta
     1081 gaactcgccg ttccgatact cgatgccgcc ccagaccttg cgctgatccg ccgtctcgaa
     1141 gccgatgctc ggagccgcga acgaatagtg gccggcggga agcacgatgc cgtcccagat
     1201 ctcgaacggc tcgtcgagct gctcctgctc cgcggaatac tcgagctcga gcgcgtcgcc
     1261 gaactggctt tcgacctcga gcaatcggta gtcgacctct tgcgattgca gctcgccgtt
     1321 caagagctcg atgcgctcgg cgtcgtagcc gcccgagatc gagcggagca ggccatcgcg
     1381 cggccgatgt cggtagaagg tgccgaagtt cagcgattga atgcctgggc gattcaggaa
     1441 gccgagcccg ggctcgaagc tctcgccgag acgcgtgaag ccgacgtcac cgcgccagcc
     1501 ggtattgttc ggcgcggcga agcgaacgcc gtacgcactc tggtcgccga tcgcatcttc
     1561 ggtgtcgctc tcttgcagcc acgcgttgac ctcgacgacc ttgttaccgg caaggcggct
     1621 gttgcggtag cggaaatcga cgcccgcgag ggagttcgcc acgttcgaac ccgggttgcc
     1681 ttcggtcacg atcatgccga cgttcgattc ctcgagcagg ttcgccgtcg ctcgcgcgac
     1741 ggtggcgttg tcgggcgcga tcgtctcgaa ctcgtcctgg cgaacggaga gggcgcccaa
     1801 gttccagcgg cccacgcggc ccgtgagctt gccg
//
LOCUS       DATCUD010000166         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101079, whole genome shotgun sequence.
ACCESSION   DATCUD010000166 DATCUD010000000
VERSION     DATCUD010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101079"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..936
                     /locus_tag="VIQ99_02345"
     CDS             <1..936
                     /locus_tag="VIQ99_02345"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY9182009.1"
                     /translation="GRGASLGWWDGMIGPGKAFDTERFFVVSANLLGGCRGTTGPSST
                     NPATGRAYGSDFPVITVADMVRAQRAFLRELGVERLAAVAGGSLGGMQALEWAVLYPD
                     DVDAIVPIASAPALRPQGIAWNAIARNAITADPDWQDGHYYGSGRAPTRGMAVARMVG
                     HVTYLSALAMGRKFGRRLQHADEVRYVLTEPEFAVESYLRHQADSFVKRFDANTYLYM
                     SRALSYFDLARQHGRGSLIDALRDVRARTLLIAFSSDWLYPPGDSEELAAALRAAGKR
                     VQLEIIDAPYGHDCFLLEEARQTPMIREFLASPTR"
     gene            945..2013
                     /locus_tag="VIQ99_02350"
                     /pseudo
     CDS             945..2013
                     /locus_tag="VIQ99_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509045.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
BASE COUNT          303 a          695 c          681 g          334 t
ORIGIN      
        1 ggccgcggcg cgagcctcgg ctggtgggat ggcatgatcg ggccgggcaa ggcgttcgac
       61 accgagcggt tcttcgtcgt cagcgcgaac ctactcggcg gctgccgcgg gacgacgggg
      121 ccgtcgagca caaaccccgc gaccgggcgc gcgtacggca gcgacttccc ggtcatcacg
      181 gtcgcggaca tggtgcgcgc gcagcgcgcg ttcctccgcg agcttggggt cgagcggctg
      241 gccgcggtcg cgggcgggtc gctcggcggc atgcaagcgc tcgagtgggc cgttctctat
      301 cccgacgacg tcgacgcgat cgtcccgatc gcgagcgcac ccgcgctgcg accgcaaggc
      361 atcgcgtgga atgcgatcgc ccgcaatgcg atcacggcag atccggattg gcaggacggc
      421 cactactacg gcagcggtcg agcgccgacg cgcggcatgg ccgtcgcgcg catggtgggg
      481 catgtcacgt acctctcggc gctcgccatg gggcgcaagt tcggccgccg gttgcagcat
      541 gccgacgagg ttcgctacgt gctgaccgag cccgagttcg ccgtcgagag ctacttgcgc
      601 caccaggccg acagcttcgt gaagcgcttc gacgcgaaca cctatctcta catgtcgcgc
      661 gcgctgtcgt acttcgatct cgcgcgtcag cacggacgcg gcagtctcat cgacgcgttg
      721 cgcgacgtgc gagcgcgcac tctgctgatc gcgttcagct ccgactggct ctatccgccg
      781 ggtgattcgg aggagctcgc cgcagcgctt cgcgccgcgg gcaagcgcgt gcagctcgag
      841 atcatcgacg cgccgtacgg ccacgactgc ttcttgttgg aagaggcccg ccagacacct
      901 atgattcgcg agtttctcgc gtccccgacg cgataggagc gtgcatggaa gagccgcgcc
      961 gttttggctt cgacacccgc caagtccatg gcggccagcg tccggacccg aacaccggcg
     1021 cgcgcgccgt gccgatctac cagacgacga gctacgtgtt ctaggacccc gagtccgccg
     1081 cggcctactt caacctccag gagtacggca acacgtactc gcggatcgtg aatccgaccg
     1141 tcgccgtgtt cgaggaacgc atggctgctc tcgaaggcgg ctgcggcgcc gtcgcattcg
     1201 cgagcgggct cgccgcgcag gccgcggcgc tgttcacgtt gctctcgccg ggcgatcacg
     1261 tcgtctcgtc ggcggcgctc tacgggggca ctgtgaatca gctcaagcac gtgttgcgca
     1321 agatgtgcgt ggagctcacc tgggtcaacc ccgacgatcc cgacgcctgg cgcgctgccg
     1381 ttcgcgacaa cacgaaggca ttcttcggcg agacgatcgg caacccgggc ggcaacgtgc
     1441 tcgacatcga ggtgctcgcg aagatcgcgc acgagcacgg cctgccgctg ctcgtcgaca
     1501 atacgttcgc gacgccctac ctctgcaggc cgatcgagtg gggcgccgat atcgtgttgc
     1561 actcggcgac gaagttcatc ggcggccacg gcacgagcat cggcggcgtg gtcgtggact
     1621 cgggcacgtt cgactggtcg aacggccgct tcccggtcat ggcggaccca tcgcccgcct
     1681 atcacgggct gcctttccac gagactttcg gcacgtacgg ctacctgatg aagttgcgcg
     1741 ccgagacgct gcgcgacctc ggcgcgtgtc tgagcccgtt caacgcattc ctgttcctgc
     1801 aaggcctcga gacgttgtcg ctgcgcatgc agcgccacgt cgcgaacgcg ctgggcgtgg
     1861 cgcgctggct cgagaagcac gagctcgcct cgaacgtcac ccattcgggc ctcccgggat
     1921 cgcgctacgc gccgctcgtc gcgaagtatc tgccgcgcgg cgtcggctcg gtgttctcgt
     1981 tcgacatccg cggcgggcgc gacgccggcc agg
//
LOCUS       DATCUD010000167         3346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1812, whole genome shotgun sequence.
ACCESSION   DATCUD010000167 DATCUD010000000
VERSION     DATCUD010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3346
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1812"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VIQ99_02355"
     CDS             complement(<1..313)
                     /locus_tag="VIQ99_02355"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182010.1"
                     /translation="MRQWLQCCGALVLGFGWAAGAGAHHSYAMFDGKRTVTVTGTVAK
                     IEWTNPHVFIWMYVPNPARENGYDLYAFENGSPNVLTRRGWSATTFTAGEKLAVTYWP
                     LL"
     gene            complement(316..750)
                     /locus_tag="VIQ99_02360"
     CDS             complement(316..750)
                     /locus_tag="VIQ99_02360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020570168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEY9182011.1"
                     /translation="MTADKRKNKTAATTVDPIRFIDKVKSEVKRRDSHELVAMMQDIV
                     GEPPKMWGPTIVGFGTVHYRYESGREGDVCLTGFSPRSGSLVVYLGSVIHDEKLMAKL
                     GKHKTGKGCLYINKLDDIDRGVLRKLIKAGVETTRKQRGMTA"
     gene            complement(862..1266)
                     /locus_tag="VIQ99_02365"
     CDS             complement(862..1266)
                     /locus_tag="VIQ99_02365"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182012.1"
                     /translation="MDRQAIEQLLAGDYPHALDSRDFDAYAALFTEDGELSLQGQTAK
                     GRAAIRDFVAALPPEPRVMHPITNLSYAIDGNTATGGAYWQDIGLVGGTPGVLVAGRY
                     EDTLRKEGGVWRIATRNIVIEFAPAPAAAVAP"
     gene            1480..2499
                     /locus_tag="VIQ99_02370"
     CDS             1480..2499
                     /locus_tag="VIQ99_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006299283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY9182013.1"
                     /translation="MSQDPILGVAPLGFPWQTKDPFLVCVHHVDLYPAGNDRLGPAAS
                     LAGRNMGQDFAGKDGWRMYHGHAVPGFPQHPHRGFETVTFVREGFIDHSDSLGATARF
                     GRGDVQWLTAGAGIVHSEMFPLLKPDRPNRLELFQIWVNLPAKSKFAPPYFTMFWDAD
                     VPRYRPAGQSGVEITVVAGELEGAKPPAPPPDSWAANSDAELAIWLITLDANASWTVP
                     PTKSGRTARTLYFFSGAKLEIAGRTLTKPAAIEVVPDQPLRLVAPDARVEVLLMQGRP
                     IGEPVAQYGPFVMNTRAELETAFDDYRRTQFGGWPFPADDPVHPRERGRFARHADGRV
                     EDAPV"
     gene            2682..>3346
                     /locus_tag="VIQ99_02375"
     CDS             2682..>3346
                     /locus_tag="VIQ99_02375"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEY9182014.1"
                     /translation="MPTGVWHLATLQLPREPEVVIEAGQTYTVELAAGRISGQADCNR
                     YTGGYEQPGPGRLKFGLFAATLAACAPASRAPDFTRLLGAATRYELRGEQLVLTTDDG
                     GLLIFARQPPAAGVAAPEVGRTFVFECAGDLSFTVRTGPGEVAVWAPRSLGGRYAVLS
                     QSRAASGARYEEGDFVFWNKGELATFELAGQTFADCRSNPRQVPWADAARRGAIFRAL
                     GNEP"
BASE COUNT          481 a         1147 c         1155 g          563 t
ORIGIN      
        1 cgagcagtgg ccaatacgtg accgcgagct tctctccggc cgtgaacgtc gtcgcggacc
       61 agccgcgccg cgtcagcacg ttcggcgagc cgttctcgaa cgcgtacagg tcgtagccgt
      121 tctcgcgcgc ggggttcggc acgtacatcc agatgaacac gtgcgggttc gtccactcga
      181 tcttcgcgac cgtgccggtg accgtcacgg tgcgcttgcc gtcgaacatc gcgtacgagt
      241 gatgcgcgcc ggcaccggcc gcccagccga agccgagcac gagcgcgcca caacattgca
      301 accattgacg catcgtcatg cagtcatccc tcgttgtttg cgcgtggttt ccacgcccgc
      361 tttgatcagc ttgcgcaaca cgccgcggtc gatgtcgtcg agcttgttga tgtacaggca
      421 acccttgcct gtcttgtgct tcccgagctt cgccatgagc ttctcatcgt ggatcacgga
      481 gcccaagtac acgacgaggc tccccgagcg tggcgagaaa ccggtcagac agacgtcgcc
      541 ctcgcggccg ctctcgtagc ggtagtgaac ggtgccgaac ccgacgatcg tcggtcccca
      601 catcttcggc ggctcgccga cgatgtcctg catcatggct acgagctcgt ggctgtcgcg
      661 gcgcttgacc tcgctcttga ccttgtcgat gaaccggatc gggtcgaccg tcgttgcggc
      721 cgtcttgttc ttgcgtttgt ccgcggtcat gtgcttcccc tcgtcagcgg gcgctccgcg
      781 ctcggcagat tcggtccgcc gtcgagtaga tgtcgcggaa ctcggccacc ggcacgctcg
      841 tcgttgcgct cgcgatcgcg ctcacggggc cacagcggcg gccggggccg gcgcgaactc
      901 gatcacgatg ttgcgagtcg cgatgcgcca cacgccgcct tccttgcgaa gcgtgtcctc
      961 gtaacgtccc gccacgagca cgcccggcgt accgccgacg agaccgatgt cttgccagta
     1021 cgcgccgccc gtggccgtgt tgccgtcgat cgcgtaggag aggttcgtga tcgggtgcat
     1081 cacgcgcggt tccggaggca gcgcggcgac gaaatctctg atcgccgcac gacccttggc
     1141 cgtctgtcct tgcaggctga gctcgccgtc ctcggtgaag agcgcggcgt acgcgtcgaa
     1201 gtcgcgcgag tccaacgcgt gcggatagtc gccggccagc agttgctcga ttgcttgccg
     1261 gtccacgagt cgtgcgagat tcgggtcggg gctcggcggc gcgggttggc acccgggggg
     1321 ccgcgatcgc aaggacggcg agaatcgcga cgcgtcgcag catggtggtt cctcgaggcg
     1381 agtcggcacg gcggaagtta gcacgaacgg cgcgcgatcc gcaccggtga cgatgccgcg
     1441 cggtttgaca gcgcgaggcc gaattcctag gctgcggcca tgagccaaga tccgatcctg
     1501 ggagtggcgc cgctcgggtt cccgtggcag acgaaggatc cgttcctggt ctgcgtgcac
     1561 cacgtcgact tgtacccggc cggcaacgac cgtctcggtc ccgcggcgtc gctcgcgggc
     1621 cgcaacatgg gtcaagactt cgcgggtaag gatggctggc gcatgtacca tggccacgcc
     1681 gtgcccggct tcccgcagca cccacaccgc ggtttcgaga cggtgacgtt cgtgcgcgag
     1741 gggttcatcg atcacagcga ctcgctcggc gcgaccgcgc gcttcggccg cggcgacgtg
     1801 cagtggctca cggccggcgc cggcatcgtg cactcggaga tgtttccact gctcaagccc
     1861 gatcggccga accggctcga gctgtttcag atctgggtca acctgcccgc gaagtccaag
     1921 ttcgcgccgc cgtacttcac gatgttctgg gacgccgacg tcccgcggta ccggccggcc
     1981 ggacagagcg gcgtcgagat caccgtcgtc gccggcgagc tcgagggcgc gaagccgcct
     2041 gcacccccgc ccgattcgtg ggccgcgaat tccgatgccg agctcgcgat ctggctgatc
     2101 acgctcgacg cgaacgcgtc ttggactgtg ccgcccacga aaagcgggcg caccgcacgc
     2161 acgctgtatt tcttctccgg cgcgaagctc gagatcgcgg ggcgcacatt gacgaagccg
     2221 gccgcgatcg aggtcgttcc ggatcagccc ctccgactcg tggcgccgga cgccagggtc
     2281 gaggtgttgc tgatgcaggg taggccgatc ggcgagcccg tcgcgcagta cggcccgttc
     2341 gtcatgaaca cgcgcgccga gctcgagacc gcgttcgacg actatcgccg cacgcagttc
     2401 ggcggttggc cgtttccggc cgacgatccc gtgcatccgc gcgagcgcgg gcgcttcgca
     2461 cgccatgccg acgggcgcgt cgaggacgcg ccggtctgac tatgaagccg cggccgagcg
     2521 cagcgcgcct gtacccgtac ctttgtgtcg ttgcggcggc agtggctgcg tgcgagtcgc
     2581 cccagagcga cgcaccggcg gcgccgacgg gcggcacatc ggccacgccc acagcgacgc
     2641 cgccgccgag cccagacgcg gctccggccg ctgcggaatc gttgccgacg ggcgtctggc
     2701 atctcgcaac attgcagctg ccgcgcgagc ccgaggtcgt gatcgaggcg ggccagacgt
     2761 acacggtcga gctcgcggca gggcgcatca gcgggcaggc cgactgcaat cgctacacgg
     2821 gtggctacga gcaaccgggc ccgggacggc tgaagttcgg cttgttcgcg gccacgctcg
     2881 cggcctgcgc gccggcgtct cgagcaccgg atttcacgcg gttgctgggg gccgcgacac
     2941 gctacgagct gcgcggtgag cagctcgtgc tcacgaccga cgacggcggg ctgttgatct
     3001 tcgcgcgtca gccgcccgcg gcaggggttg cggcgccgga ggtcgggcgc acgttcgtgt
     3061 tcgagtgcgc gggcgacctg agcttcacgg ttcgcacggg tcccggcgag gtggccgtgt
     3121 gggcgccgcg ctcgctcggc ggccgctacg cagtgctgtc gcaatcgcgc gccgcgtccg
     3181 gcgctcgtta cgaggagggc gacttcgtgt tctggaacaa aggcgagctc gcgacgttcg
     3241 agctggccgg ccagaccttc gcggactgcc gctcgaatcc gcgccaggtt ccgtgggccg
     3301 acgccgcgcg gcgcggcgca atcttccgtg cgctcggcaa cgagcc
//
LOCUS       DATCUD010000168         1771 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44264, whole genome shotgun sequence.
ACCESSION   DATCUD010000168 DATCUD010000000
VERSION     DATCUD010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44264"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VIQ99_02380"
     CDS             complement(<1..941)
                     /locus_tag="VIQ99_02380"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9182015.1"
                     /translation="MANTDRDVVVVGAGLAGLHAAGTLEAAGASVLVLEAQQRVGGRI
                     HSMRQLGSTAEAGGTYIGAGYARVIGAAERHGVELMDVTPVLEFFREQDLALNGEIIR
                     QKDWPTHPANDFPVADKQHLPWNYHRVLTMRDNPLATPDEWLDPKHAALDVSAHEWFK
                     SLGLSDRAIDVAYGLNVSFGRNAHDVSALLLLFRGAFSKTQRALAPTDSLGFTARHGV
                     QRIPEAMAAALSGGVELGRAVTAITLERDRAVVVTADGRRVTARHVVAALPASVLRGI
                     AIEPQLPAAQAEAIAKLPSQPLTQVYLAPRSRFWEQDG"
     gene            complement(948..>1771)
                     /locus_tag="VIQ99_02385"
     CDS             complement(948..>1771)
                     /locus_tag="VIQ99_02385"
                     /inference="COORDINATES: protein motif:HMM:NF012964.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEY9182016.1"
                     /translation="YWGNRNWHPLLPDTIEQMAHAGVQRALAFVTSTFSSYSGCRRYR
                     EDLYDAASAVPNAPLFDKLRAPYNHPGFIEAVGDCVTDALAKLPAEQRDHALVLFTAH
                     SLPSSMARGCQYESQLMESCRLVGDALEHQRWRLVYQSNNAAYSREPWLGPDIKDALR
                     EAKAQGVPAVVVAPIGFVCDHMEVVLDLDIDAAATAHEIGLPMVRAATVGTHPAYVEM
                     VRELIVERLSPDTPRRALGSLGPSHDRCAADCCLSGRPGPAKPALCGVDDPLRYG"
BASE COUNT          285 a          598 c          609 g          279 t
ORIGIN      
        1 ccatcctgtt cccagaaccg gctgcgcggc gcgagataga cttgcgtcag cggttgcgag
       61 ggcaacttcg cgatggcttc tgcttgcgcc gcgggcagct gcggctcgat cgcgattccc
      121 cgcagcacgc tggccggcag cgccgcgacc acgtggcgtg ccgtaacacg ccggccgtct
      181 gcggtgacga cgacggcgcg gtcgcgctcg agagtaatcg ccgtgacggc acgaccgagc
      241 tccacgcccc cggagagtgc ggccgccatc gcctcgggaa tccgctgcac gccgtggcgc
      301 gcggtgaacc ccaagctgtc cgtcggcgcg agcgcgcgtt gagtcttcga gaacgcaccg
      361 cgaaacaaca gcagcagcgc ggacacgtcg tgtgcgttgc ggccgaagct cacgttcaag
      421 ccgtaagcga cgtcgatggc tcggtcgctc aacccgagac tcttgaacca ctcatgtgcc
      481 gaaacgtcga gcgcggcatg cttcggatcg agccactcgt cgggtgtcgc gagcgggttg
      541 tcgcgcatcg tgagcacgcg atggtagttc cacggcaggt gctgcttgtc ggccaccgga
      601 aaatcgttcg cgggatgcgt gggccaatcc ttctggcgaa tgatctcgcc gttcagagcg
      661 agatcctgct cgcgaaagaa ctcgagaacg ggcgtgacgt ccatgagctc gacgccgtgg
      721 cgttcggctg ccccgatcac gcgcgcatag cccgcgccga tgtaggtgcc gccggcctcg
      781 gccgtgctgc ccagctgtcg catcgagtgg atgcgcccgc ccacgcgctg ttgcgcctcg
      841 agcacgagca cgcttgcgcc ggcggcctcg agcgtgccgg ccgcatggag ccccgcgagc
      901 cccgcgccaa cgacgacgac atcgcgatcg gtgttggcca cggcgcccta cccgtaacgc
      961 aacggatcgt cgacgccgca caaggcaggt ttggcgggcc cgggacgccc ggacaagcag
     1021 cagtcggcgg cacagcgatc gtggctcggg ccgagcgatc ccagcgcgcg ccgcggggtg
     1081 tccggcgaca ggcgctcgac gatcagctcg cggaccatct cgacgtacgc cgggtgcgtg
     1141 ccgacggtcg cggcgcgcac catcggcaaa ccgatctcgt gcgcggtcgc cgcggcgtcg
     1201 atgtcgaggt cgagcacgac ctccatgtga tcgcagacga acccgatcgg cgcaaccacg
     1261 acggccggca cgccttgggc ctttgcttcg cgaagtgcgt ctttgatgtc gggcccgagc
     1321 cagggctcgc ggctgtacgc ggcattgttg ctctgataca cgagacgcca gcgctgatgc
     1381 tcgagcgcat cgccgacgag ccggcaactc tccatgagct gtgactcgta ctggcagccg
     1441 cgtgccattg acgacggcag gctgtgcgcc gtgaacagca cgagcgcgtg gtcgcgttgc
     1501 tcggcaggga gcttcgcgag tgcgtccgtg acgcaatcgc cgacggcctc gatgaagccg
     1561 gggtggttgt aaggcgcgcg caacttgtcg aacaacggtg cgttcggcac cgcgctcgct
     1621 gcgtcgtaga gatcctcgcg gtagcggcgg cagccgctgt acgagctgaa cgtgctcgtc
     1681 acgaacgcga gcgcgcgctg cactccggcg tgcgccattt gctcgatcgt atcgggcagc
     1741 agcggatgcc aattgcgatt gccccaatag a
//
LOCUS       DATCUD010000169         1872 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1841, whole genome shotgun sequence.
ACCESSION   DATCUD010000169 DATCUD010000000
VERSION     DATCUD010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1841"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            380..>1872
                     /locus_tag="VIQ99_02390"
     CDS             380..>1872
                     /locus_tag="VIQ99_02390"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEY9182017.1"
                     /translation="MICATVEAQPTDPIAVRGVTGGEIPHSTLELQVDGVLDDPIWQQ
                     ALKVPLTVETWPRENAVPEVETTVYLVENGDQLMIAFDARDPDPDSIRAYLRDRDSAF
                     NDDFVGVVLDTFNDERRAFEFFVNPLGVQMDLIQDDVNRNESESWDAIWDSGGVITST
                     GFTTEMAIPFSQLRFPSADGDQTWGIDMLRFRPRDQRVRMSNNPQDRNRNCYLCQFGK
                     YTGFANAEPGKALEIVPTLTATRSDSVPTGAPAGALERGDYETEAGLGVRWGITPDLT
                     LDLTLNPDFSQVEADVPQLQENTQFALFFPESRPFFLEGQEYYTTPLQAVFTRTVADP
                     DAGAKFTGRTGKNTIGVFATDDVVTNLLFPGPLGSRNHSLDQSNDAFVGRYARAFGQT
                     SQIGALITSREGDGYSNQVAGFDGRYFAGDNHTFRFQYLDSRTEYPAQVVTDFAQPAG
                     ELDGDALRLEYRYGSRNWFGFWARQELDPNFRADSGFISRVDVVEDY"
BASE COUNT          333 a          595 c          603 g          341 t
ORIGIN      
        1 tacctgccgc atcaactccg agtcgcttgt atccttcacg aatctccgga cgctggccga
       61 atgcagtcat tgagattcgg cggtcccaag aaaggttaca tccacggccg atgtaacttt
      121 tcggggggct cgcgcatcta acggccaggc tgtacggttt tggtcaacac acacgcgaat
      181 tcgcgacact ttggtggact tgcgagtggc ggcgccacca ccggattcgg cactaacaac
      241 agagttatca gtgggttggg tgcaccgagc gccattggca cggttgctgc aacggtgcgc
      301 caggcgaatc gtcttgggac ggggggcgac gttgcgtaga aacggtgcgc ggagggtctc
      361 gactgcggcg gccctcttca tgatctgcgc gacggtcgaa gcccagccta ccgatcccat
      421 cgccgttcgc ggcgtgacag gcggagagat cccgcactcg acgctcgagc tacaggtcga
      481 cggtgtgctc gacgatccga tctggcagca ggcgctcaag gtgccgctca cggtcgaaac
      541 gtggccccgt gaaaacgcgg tccccgaggt agagaccacg gtgtacctcg tcgagaacgg
      601 cgatcagctc atgatcgcgt tcgacgcccg ggacccggat ccggactcga ttcgcgctta
      661 cctacgcgat cgcgactccg cgttcaacga cgacttcgtc ggcgtcgtgc tcgacacgtt
      721 caacgacgag cggcgcgcgt tcgagttctt cgtgaacccg ctcggcgtgc agatggactt
      781 gatccaagac gacgtgaacc gcaacgagag cgagtcgtgg gatgcgatct gggactccgg
      841 gggcgtgatc acttctacgg gcttcacgac cgaaatggcg attccgttca gccagctgcg
      901 tttcccgagt gccgatggcg atcagacctg gggcatcgac atgctgcggt ttcggccgcg
      961 cgaccagcgc gtgcgcatgt cgaacaatcc gcaggaccgc aaccgcaact gctatctgtg
     1021 tcagttcggc aagtacacgg ggtttgcgaa cgcggagccg ggcaaggcgc tcgagatcgt
     1081 gccgacgctg acggcgacgc gctccgattc ggtgccgacg ggcgcacccg ccggcgcgct
     1141 cgagcgcggc gactacgaaa ccgaggctgg cctcggcgtg cgctggggca tcaccccgga
     1201 tttgacgctc gacctgacgc tgaatcccga tttctcgcaa gtcgaggcag acgtcccgca
     1261 gttgcaagag aacacgcagt tcgcattgtt cttccccgag tcgcggccgt ttttcctcga
     1321 gggccaggag tactacacga ccccgttgca agccgtgttt acgcgcaccg tcgcggatcc
     1381 cgacgccggc gcgaagttca cgggccgtac cggcaagaac acgatcggcg tgttcgcgac
     1441 ggatgacgtg gtcacgaacc tgttgttccc ggggcccttg ggctcgcgca atcactcgct
     1501 cgaccagagc aacgacgcgt tcgtcggccg gtacgcgcgc gcgttcggcc agacgtcgca
     1561 gatcggtgcg ctgatcacga gccgcgaggg cgacggctac agcaaccagg tcgccggttt
     1621 cgacggacgc tattttgccg gcgacaacca cacgttccgg ttccagtacc tcgattcgcg
     1681 gaccgagtat ccggcgcagg tcgtcacgga cttcgcgcaa ccggccggcg agctcgacgg
     1741 cgacgcgttg cggctcgagt atcgctacgg ttcgcggaac tggttcgggt tctgggcccg
     1801 ccaggagctc gaccccaact tccgtgcgga ctcgggcttc atctcgcgtg tcgacgtcgt
     1861 cgaggactac tt
//
LOCUS       DATCUD010000170         1693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94096, whole genome shotgun sequence.
ACCESSION   DATCUD010000170 DATCUD010000000
VERSION     DATCUD010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1693
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94096"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1324
                     /locus_tag="VIQ99_02395"
     CDS             <1..1324
                     /locus_tag="VIQ99_02395"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9182018.1"
                     /translation="TGLPNRELLVDRLSQAVAQVHRSERRLATLFLDLDGFKEINDSL
                     GHRNGDELLKETAIRLSAVLRDTDTVARLGGDEYAFVLPQIDGPLEAETIAVKILEAI
                     KRPFLVDGREAFVSASIGIALCPDDGDTAEELLRRADMAMYSAKDSGKACYRFFAGEM
                     DEQIQERRLLQHDLRRATAAGELFLAYQPQREFASRRVVSAEALLRWRHPQRGLVSPS
                     LFIPILEEIGLIKDVGAWVLHSALTDLARWRSLGLPIERIAVNVSARQLQDPHFADEV
                     IDEITARGLKGHDLEVEITEASVVADFRGTNETLSRLVKHGVRIALDDFGTGYSSLAY
                     LNELVFDTLKIDRGFVINLPAEKSVAIVRAIIAVAGTLGKKVVAEGIETELQYRKLAS
                     LGCDLGQGYLLSRPLEADAFVTWVRGLLAEPTHDSTSRIWRPNFRGLG"
     gene            complement(1345..>1693)
                     /locus_tag="VIQ99_02400"
     CDS             complement(1345..>1693)
                     /locus_tag="VIQ99_02400"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY9182019.1"
                     /translation="QNGAGLSRDERASVQLLVDVLRTAYSSPYAPEFIASLSLGGLDG
                     TTRNRFDSTPAKSVMHLKTGRLDHVSAVAGYVHAPNGRTYVVAVVMNSENAHRGPGQE
                     LEEAVLSFTEEQP"
BASE COUNT          295 a          571 c          552 g          275 t
ORIGIN      
        1 gacgggcctg ccgaaccgcg agctgctcgt ggaccgattg agccaagccg tcgcccaagt
       61 gcaccgcagc gagcgccggc tcgcgacgct gtttctcgac ctcgacggct tcaaggaaat
      121 caacgactcg ctcggccatc gcaacggcga cgagctcctg aaggaaacgg ccatacgcct
      181 ctcggccgtg ctgcgcgaca cggatacggt ggccaggctc ggcggcgacg agtacgcgtt
      241 cgtgctaccg caaatcgacg ggccgctcga agccgagacg atcgccgtca agatcctcga
      301 agcgatcaag cggccgttcc tggtcgacgg gcgtgaagcg ttcgtcagcg ccagcatcgg
      361 aatcgcgctg tgtcccgacg atggcgacac ggccgaggag ttgctgcgtc gggccgacat
      421 ggccatgtac agcgccaagg attcgggcaa ggcgtgctac cgattcttcg ccggcgagat
      481 ggacgagcaa atccaggagc gccgactgct gcagcacgac ctacgccgtg cgacggcagc
      541 cggcgagctg ttcctcgcct accaacccca gcgcgagttt gcgtcgcgtc gcgtggtttc
      601 cgccgaagcg ctgctacgct ggcgccaccc gcaacggggt ctcgtgtcac cttcgctgtt
      661 cattccgatt ctcgaggaga tcggcctcat caaagacgtc ggcgcctggg tgcttcactc
      721 ggcgctgacc gacctcgcac gctggcgctc gctcggcctg ccgatcgagc gcatcgccgt
      781 gaacgtgtcg gcgcgccagc tacaggatcc ccacttcgcc gacgaggtca tcgacgagat
      841 cacggcgcgc gggctcaaag ggcacgacct cgaggtcgag atcaccgaag cgtcggtcgt
      901 ggccgacttc cgcggcacga acgaaacctt gtctcggctc gtcaagcacg gtgtccgcat
      961 cgcgctcgac gatttcggca ccggctactc gtcgctggcc tacctgaacg agctggtctt
     1021 cgacacgctg aagatcgatc gcggtttcgt gatcaacctt ccggccgaga agtccgtggc
     1081 catcgtcagg gccatcatcg ccgtcgcggg cacgctcggt aagaaggtcg tggccgaagg
     1141 catcgagacg gagctgcagt accgcaagct ggcgtcgctc ggctgcgatc tcgggcaagg
     1201 ctacttgctc agcaggccgc tcgaggcgga cgcgttcgtg acctgggtgc gaggcctgtt
     1261 ggccgagccc acccacgaca gcacgtcgag gatctggcgg ccgaacttcc gcgggctcgg
     1321 ctagctacgc cggcgtgcaa cgaatcacgg ctgttcctcc gtgaagctca gcacggcctc
     1381 ctcgagctcc tgcccggggc cgcgatgcgc attctcggag ttcatgacga ccgcgaccac
     1441 gtacgtgcgg ccgttcgggg catgcacgta accggcgacg gccgacacgt gatcgaggcg
     1501 gcccgtcttc aggtgcatga cgcttttcgc cggcgtcgaa tcgaaacggt tgcgagtcgt
     1561 gccatcgagg ccgccgagcg acagcgaggc gatgaactcc ggcgcgtaag ggctcgagta
     1621 cgcggtgcgc aacacgtcca cgagcaactg caccgacgcg cgctcgtcgc gcgacaagcc
     1681 ggcaccgttc tgc
//
LOCUS       DATCUD010000171         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16075, whole genome shotgun sequence.
ACCESSION   DATCUD010000171 DATCUD010000000
VERSION     DATCUD010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16075"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(68..1726)
                     /locus_tag="VIQ99_02405"
     CDS             complement(68..1726)
                     /locus_tag="VIQ99_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019460530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY9182020.1"
                     /translation="MAVLPPGVSSANFAAACREFAAAVGAEWVLTSDEDLAPYRDHYS
                     PVPLADEELIPSAAVSPTTVQQVQAIVRTANRYRTPLYPISTGKNFAYGGPAPNLRGS
                     VIVDLKRMDKIIEVDADRHFAIVEPGVSYFDLYRYIQERGLKVWLDTPDPGWGSPVGN
                     TLDRGIGYTLGPYRDHVGAQCGFEVVLANGELMRTGMGAVPNAPTFAEYKYGFGPDPS
                     GLFAQGNFGIVTKMGLRLMPQPEHWRNGLITVPRRRDLGALIKAVNYLTDLFMIGEPW
                     YGSPLRALLGNTEFREAATRRGGADEAELDRLAAAAGLHSWQVELQFYGSERTTLASW
                     EYARELIARAVPDARAIDGESLPVPLTREQIETTTGPYPTNMRRNVTQGVPGLGIWKA
                     LGRTDAAPDAWAQGHIGLFAVIPRSAEAVFEAQQLFIDTQRELGLQSAVSHLSTPLNW
                     YQFNFLFSAGFSTGGGTFDASPSGKAKMRDGLKALLAKAGERGWGEYRAAPYFQDAVA
                     AEYSFNEHALRRFNETLKDAADPNGILAPGRGGIWPKGLRRTRA"
     gene            1797..>2577
                     /locus_tag="VIQ99_02410"
     CDS             1797..>2577
                     /locus_tag="VIQ99_02410"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY9182021.1"
                     /translation="MSFTGRICVGLVSAAITAAAQGQANPSPTAAAIDAETLRHFEAL
                     VRMDTTSPPGNEKPAADYVAQVLEREGIPVQTFAVAAHRPNVVARLAGNGRKRPLLLM
                     AHTDTVNVDPAKWTHPPFSAARDGGHIYGRGTVDDKDTVTAALMTMLLLKRNLVALDR
                     DVIFLAEAGEESDTEFGIEFMVEQHYDKIDAEYCIAEGGSATRVAGELAYAGVQTAEK
                     FPKGIDLIAHGVAGHGSVPLETNPIMHLARAINAVTQWQPPV"
BASE COUNT          428 a          876 c          867 g          406 t
ORIGIN      
        1 gtttgcgcga cggcggtcac cgcggaggcg gccgcgagaa acgaggtcgc gagtcgcggt
       61 gcatacctca tgcgcgagtc cgccgcagcc ctttcggcca aatgccgccg cgccccggcg
      121 cgagaatgcc gttcgggtcc gccgcgtcct tcagcgtctc gttgaaccgg cgcagcgcgt
      181 gctcgttgaa ggagtactcc gcggcgaccg catcttgaaa gtagggcgcc gctcgatact
      241 cgccccaacc gcgctcgccg gccttcgcga gcaatgcttt caagccgtcg cgcatcttgg
      301 ccttgccgct cgggcttgcg tcgaacgtgc cgccgccggt cgagaaaccg gccgagaaca
      361 agaagttgaa ctgataccag ttcaacggcg tgctcagatg cgacacggcg ctctggagtc
      421 cgagctcgcg ctgcgtgtcg atgaacagct gctgcgcctc gaacacggcc tcggcgctgc
      481 gcggaatcac ggcgaacaag ccgatgtgtc cttgcgccca cgcgtccggc gcggcgtcgg
      541 tgcggcccaa cgccttccaa atacccaaac ccggcactcc ttgcgtgacg ttgcggcgca
      601 tgttcgtcgg gtacggtcca gtcgtcgttt cgatctgctc gcgcgtcaac ggcacgggca
      661 gcgattcgcc gtcgatcgct cgagcgtcgg gcacggcgcg cgcgatcagc tctcgcgcgt
      721 attcccagct cgcgagtgtc gtgcgctccg agccgtagaa ctggagctcg acttgccacg
      781 agtgcaagcc ggctgccgcg gccaggcgat cgagctcggc ctcgtccgcg ccgccgcgac
      841 gcgtggcagc ctcgcggaac tcggtgttcc cgagcagcgc ccgcagcggg ctgccgtacc
      901 acggctcgcc gatcatgaag aggtcggtca gataattcac ggccttgatc agcgcgccga
      961 gatcgcgacg cctcggtacc gtgatcaggc cgttgcgcca gtgctccggc tgcggcatca
     1021 agcgtaagcc catcttcgtg acgatgccga agttgccctg cgcgaacagt cccgacggat
     1081 cgggcccgaa gccgtacttg tactcggcga acgtcggcgc gttcggcact gcgcccatac
     1141 cggtgcgcat gagctcgccg ttcgcgagca cgacctcgaa cccgcactgc gcgccgacgt
     1201 ggtcgcgata cgggccgagc gtgtagccga tgccgcggtc gagcgtgttg ccgacgggtg
     1261 agccccagcc gggatccggc gtgtcgagcc aaaccttcaa gccgcgttcc tggatgtagc
     1321 ggtacaggtc gaaatacgag acgccaggct cgacgatcgc gaagtgacga tccgcgtcga
     1381 cctcgatgat cttgtccatg cgcttcaagt cgacgatcac gctgccgcgc agattcggcg
     1441 ccggaccgcc gtaggcgaag ttcttgccag tcgagatcgg gtacagcggc gtccggtagc
     1501 ggtttgcggt gcgcacgatc gcctgcactt gctgcacggt cgtcggcgac acggcggccg
     1561 aagggatcag ctcctcgtcg gcgagcggca ccggcgagta gtggtcgcga tacggcgcca
     1621 ggtcctcgtc gctcgtgagc acccattcgg cgccgacggc ggctgcgaac tctcggcacg
     1681 cggccgcgaa gttggccgag ctcacgcccg gtggtagcac ggccatcgaa cctcctgcct
     1741 gcgtcgcaaa cttcgggtat ggtagacggc aacgcagggt tcgggggagt agcggaatga
     1801 gcttcacggg gcgcatttgc gtcgggctcg tgtcggcagc gatcacggct gcggcgcagg
     1861 gccaggcgaa tccgtcgccg accgcggcgg ctatcgacgc cgagacgctg cggcacttcg
     1921 aggcgctcgt gcgcatggac acgacgagcc cgcccgggaa cgagaagccc gcggctgatt
     1981 acgtggcaca ggtgctcgag cgcgaaggta tccccgtgca gacgttcgcg gtggcggcgc
     2041 acaggcccaa cgtcgtcgca cgcctggccg gcaacggccg caagcggccg ctgctgctga
     2101 tggctcacac cgacaccgtg aacgtcgacc ccgcgaagtg gacgcacccg ccgttcagcg
     2161 ccgcgcgcga cggcgggcac atctacggcc gcggcaccgt cgacgacaag gacactgtta
     2221 cggccgcgct gatgacgatg ctgctcttga agcgcaacct cgtggcgctc gatcgcgacg
     2281 tgatcttcct cgccgaggcc ggcgaggaga gcgacaccga gttcggcatc gaattcatgg
     2341 tcgagcagca ctacgacaag atcgacgccg agtactgtat cgcggaaggc ggcagcgcca
     2401 cgcgcgtcgc cggcgagctg gcctatgccg gcgtgcagac ggcggaaaaa tttccgaagg
     2461 gcatcgatct gatcgcccac ggtgtcgcag gccacggctc cgtcccgctc gagaccaacc
     2521 cgatcatgca tctcgcgcgc gcgatcaacg cggtcacgca atggcagccg cccgtga
//
LOCUS       DATCUD010000172         2783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58518, whole genome shotgun sequence.
ACCESSION   DATCUD010000172 DATCUD010000000
VERSION     DATCUD010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58518"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1550
                     /locus_tag="VIQ99_02415"
     CDS             <1..1550
                     /locus_tag="VIQ99_02415"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEY9182022.1"
                     /translation="RILHAEREPQNWLSYSGTVSNQRYSLLDQIDTSTVGRLDLQWVW
                     QARSLEKFEATALVVDGILYTVQAPNDVVALDAATGRVFWTYHHENAPEARACCGRVN
                     RGVAILGDTLFMGTIDAHLLAIDAKSGKLKWDSVVADAKQNFSITMSPNVFKDKVIVG
                     TAGGDMGIRGYIAAFDAKTGKEVWRFYTIPAPGEPGNDTWSGESWRTGGAAVWNAAAY
                     DPETNLAFWGTGNPAPDWDGSVRLGDNLYSNCVVALDVDTGEMKWYYQFTPHDELDYD
                     STQVPVLADIEWRGATRKAMLWANRNGILYVLDRVTGELLTGKPYVKHNWFGGFDANG
                     RVQRLPGMDVTKEPKLFQPHVHGAINWAPTSFSPRTGLYYVSHWENSGIVAMEGLFPQ
                     PVGINRRQTGMGQVNLEPFFNDYDEAYGVIRAYDPVTLEPKWEHRMADITWAGVLSTA
                     GDLVFGGGREGYFLALDARTGELLWRESLGGQINSAPMSYAIDGRQYIAIAAGSSLFA
                     FALAEDQ"
     gene            1552..2289
                     /locus_tag="VIQ99_02420"
     CDS             1552..2289
                     /locus_tag="VIQ99_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY9182023.1"
                     /translation="MKTLIAVLVCAFAAALPLDAGAQTDIRAILADTSRPQEHRDSDA
                     ARKPAEVLGYLGVGSGARVADLMTGSGYWTRLLVPLVGATGRVYAGNNAFYKGYYGET
                     FDALLKEPKFANVVRIDGQVDALPLPKDASLDAALMVLAYHDLLLGTEDRAAMNRAIF
                     AALKPGGVFVVIDHAAAAGAPTSTAESLHRIDEAVVVREITAAGFRADGSAAFLRNTA
                     DNHTVSVFDPSMAGKTDRFVLKFVKPR"
     gene            complement(2286..>2783)
                     /locus_tag="VIQ99_02425"
     CDS             complement(2286..>2783)
                     /locus_tag="VIQ99_02425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182024.1"
                     /translation="AFAVHHPAPRDPAWVRSLAWAAGVRAGMASAYAGVYSAAAADAA
                     GDLQDGTVGDAVATEMSRGFAELQQGYQGLATSYIDLARRRYRASAESRDFAFMMIQD
                     ERRVLLAQVSKRDGRILAQIDLDRDKEPQYQVDDVDSMIFYQSAASTISAYRFSPEQV
                     NVALR"
BASE COUNT          481 a          902 c          956 g          444 t
ORIGIN      
        1 agcgcatctt gcacgcggag cgcgagccgc agaactggtt gagctactcg gggacggtct
       61 cgaaccagcg ttacagcctg ctcgatcaaa tcgacacgag cacggtgggc cggctcgacc
      121 tgcaatgggt gtggcaagca cgctcgctcg agaaattcga ggccacggcg ctcgtcgtcg
      181 acggaattct ctacaccgtg caagcgccga acgacgtcgt cgcgctagac gccgcgaccg
      241 gacgcgtgtt ctggacgtat caccacgaaa acgcgcccga ggcacgcgcg tgctgcggcc
      301 gcgtgaaccg cggcgtcgcg atcttgggcg acacgttgtt catgggcacg atcgacgctc
      361 acctgcttgc gatcgacgcg aagagcggca agctcaagtg ggacagcgtc gtcgccgatg
      421 cgaagcagaa cttctcgatc acgatgtcgc cgaacgtctt caaggacaaa gtcatcgtcg
      481 gcaccgcggg cggcgacatg ggcattcgcg gctacattgc cgcgttcgac gcgaagaccg
      541 gtaaagaggt ctggcggttc tacacgatcc cggcgcccgg cgagcccggt aacgacacgt
      601 ggtcaggaga gtcgtggcgc accggcggcg cggcggtttg gaatgcagcg gcctacgatc
      661 ccgagacgaa tctcgcgttc tggggtaccg gcaacccggc gccggattgg gacggcagcg
      721 tgcggctcgg cgacaacctc tacagcaact gcgtggtcgc gctcgacgtc gataccggcg
      781 agatgaagtg gtattaccag ttcacgccgc acgacgagct cgactacgac tccacgcagg
      841 tccccgtgct cgcggacatc gaatggcgcg gcgcgacgcg caaggccatg ctgtgggcga
      901 accgcaacgg catcctatac gtgctcgacc gagtcacggg cgagctcctc acgggcaagc
      961 cgtacgtcaa gcacaactgg ttcggcggct tcgacgcgaa tgggcgggtc cagcgcttgc
     1021 ccggcatgga cgtgacgaag gagccgaagc tgttccaacc gcacgtgcac ggcgcgatca
     1081 actgggcgcc gacgtccttc agcccgcgca ccggcctcta ttacgtctcg cactgggaga
     1141 actcgggcat cgtggcgatg gagggcctgt tcccgcagcc ggtcggcatc aatcggcgcc
     1201 agaccgggat ggggcaggtc aacctcgagc cgttcttcaa cgactacgac gaggcgtacg
     1261 gcgtgatccg tgcctacgat cccgtcacgc tcgagccgaa gtgggagcac cgcatggcgg
     1321 acatcacctg ggccggcgtg ctgtcgacgg ccggagacct cgtgttcggc ggcggccgcg
     1381 aggggtactt cctcgcgctg gacgcgcgca ccggcgagct cttgtggcgc gagtcgctcg
     1441 gcggccagat caacagcgcg ccgatgagct atgcgatcga cggccggcaa tacatcgcga
     1501 tcgcggccgg cagctctttg tttgcgtttg cactagcgga ggatcaataa aatgaaaacc
     1561 ctgattgcag ttctagtttg tgcgttcgca gcggcgctgc cgctcgacgc cggcgcgcag
     1621 accgacattc gcgcgatctt ggccgatacg agccgcccgc aggagcaccg cgattccgac
     1681 gcggcgcgga agcccgcgga ggtgctcgga tatctcggtg tcggcagcgg cgcccgcgtc
     1741 gcggacctca tgaccggcag cgggtattgg acgcggctgc tcgtgccgct cgtcggggcg
     1801 accggccgcg tgtacgccgg caacaacgcg ttctacaagg ggtactacgg cgagacgttc
     1861 gacgcgctgt tgaaggagcc gaagttcgcg aatgtcgtgc ggatcgacgg ccaggtcgat
     1921 gcgctgccgc tgccgaagga cgcttcgctc gacgcggcgc tgatggtgct cgcgtatcac
     1981 gacctgttgt tgggcaccga ggaccgcgcc gcgatgaatc gcgccatatt cgcggccttg
     2041 aagccgggtg gtgtgttcgt cgtgatcgat cacgcggccg cggccggcgc tccgacgtcc
     2101 acggcggagt cgctgcaccg gatcgacgag gccgtcgtcg tccgcgagat cacggccgcg
     2161 gggttccggg ccgacggtag cgcggcgttc ctgcgcaata cggccgacaa ccacaccgtc
     2221 tccgtcttcg acccgagtat ggcgggcaag acggaccgct tcgtgctgaa gttcgtgaag
     2281 ccgcgctagc gcagcgcgac gttgacctgc tcgggcgaga accggtacgc ggagatcgtc
     2341 gacgcggcgg actgataaaa gatcatgctg tcgacgtcgt cgacttgata ctgcggctct
     2401 ttgtctcgat cgagatcgat ttgcgcgagg atgcggccgt cgcgcttgct gacctgcgcg
     2461 agcagcacgc ggcgctcgtc ctggatcatc atgaacgcga agtcgcgcga ttcggccgac
     2521 gcgcgatagc gacgccgcgc gaggtcgatg tagctcgtcg cgagcccctg ataaccctgc
     2581 tgtagctcgg cgaagccgcg cgacatctcg gtcgcgaccg cgtcgccgac cgtgccgtcc
     2641 tgaaggtcgc cggccgcgtc cgcggcggct gcgctgtaga cgccggcgta agccgacgcc
     2701 atgcccgcgc gcacgccggc ggcccacgcg agcgagcgga cccacgccgg atcgcgcggc
     2761 gccggatgat gcacggcgaa cgc
//
LOCUS       DATCUD010000173         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_1925, whole genome shotgun sequence.
ACCESSION   DATCUD010000173 DATCUD010000000
VERSION     DATCUD010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1925"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VIQ99_02430"
     CDS             complement(<1..389)
                     /locus_tag="VIQ99_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182025.1"
                     /translation="MATTQAQFDDLVARLEREADRNPGFYKLKLGAFATLGYVYIFGV
                     LLVLIAGTGLVIAAIAAGKGALLIKLVLPLVVLVGIVLKSLWVKLDAPQGMRLTRSEH
                     PRLFEVIDNVRRAASAPPAHEVLLTNEL"
     gene            complement(526..981)
                     /locus_tag="VIQ99_02435"
     CDS             complement(526..981)
                     /locus_tag="VIQ99_02435"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY9182026.1"
                     /translation="MNAPPTLTELKLSPEMKHAINTAFESGRAVSFSYVDDRGAPHLS
                     YRGSTQAYSDTQLAIWVRNPEGLLLPSVKKNPAVALIYGNFDPKQRGFMMFRGRARVD
                     DNADVRRRVYEAAHEFERSQDKDRKGVALIVDLESIEGFFGGARLAMRA"
     gene            complement(978..1373)
                     /locus_tag="VIQ99_02440"
     CDS             complement(978..1373)
                     /locus_tag="VIQ99_02440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEY9182027.1"
                     /translation="MRAAAKKNTIRRRRPTFDDVRKIALSMPEVEETTGYGMPWFKAG
                     KTRFAGEPVPRRDVEPRSIGVGVSFEDRDRLIASRPEVYYVTEHFAPYPAVLARLTTM
                     SLDELRELLALGWHYAMERQTAKKTRRKK"
BASE COUNT          241 a          491 c          495 g          284 t
ORIGIN      
        1 agctcgttcg tgagtagcac ctcgtgggcc ggcggagcgc tcgccgcgcg cctgacgttg
       61 tcgatgacct cgaagagccg cgggtgctcg ctgcgcgtga ggcgcatgcc ctgcggcgca
      121 tcgagcttca cccacaacga cttcaacacg atgcccacga gcacgacgag cgggagcacg
      181 agcttgatca acagcgcgcc cttgcccgca gcgatggccg cgatcacgag gcctgtgccc
      241 gcgatgagca ccagcagcac gccgaagata tagacgtagc cgagcgtggc gaacgcgccg
      301 agcttgagct tgtagaagcc ggggttccgg tcggcctcgc gctcgaggcg cgcgactaga
      361 tcgtcgaact gtgcttgcgt ggtggccata cgctcacgga gtcggcccga tcgactgccg
      421 attctgcgcc gcgcccgccg tcccggaacg tgccgcgttc gcacttccgg cgcagcgggc
      481 agcttcggtt aaatcgctcc gcggcggcgc gtggccagag cgaggctagg cgcgcatggc
      541 gaggcgcgcg ccgccgaaga agccctcgat gctctcgagg tcgacgatca gcgcgacgcc
      601 tttgcggtcc ttgtcctgac tgcgctcgaa ctcgtgtgcg gcctcgtaca cgcggcgtcg
      661 cacgtcggcg ttgtcgtcga ctcgggcgcg gccgcggaac atcatgaacc cgcgctgttt
      721 cggatcgaag ttgccgtaga tcagcgcgac ggccgggttc ttcttgacgg atggcaacag
      781 caacccttcg gggttgcgta cccagatcgc gagctgcgtg tcgctgtacg cctgcgtgct
      841 gccgcgatac gacagatgcg gagcgcctcg gtcgtcgaca taggagaatg agactgctct
      901 gccggattcg aaggcggtgt tgatcgcgtg cttcatttcg ggcgagagct tgagctcggt
      961 cagtgtcggc ggtgcgttca tttttttctc ctcgtcttct tcgcggtttg ccgctccatc
     1021 gcgtagtgcc atccgagcgc gagcagctcg cggagctcgt ccaagctcat ggtcgtgagc
     1081 cgcgcgagca cggcagggta cggagcgaag tgctcggtca cgtagtagac ctcgggccgc
     1141 gaggcgatca gccggtcccg atcctcgaag ctgactccga ccccgatcga cctcggctcc
     1201 acgtcgcggc gcgggaccgg ctcgcccgcg aaacgcgtct tgccggcctt gaaccatggc
     1261 atcccgtagc ccgtggtctc ctcgacctcg ggcatcgata gcgcgatctt gcggacgtcg
     1321 tcgaacgtcg gcctccggcg ccggatggtg ttcttcttgg ccgcggcgcg cattgggtta
     1381 gggtactccc gatcaatcgg atttttctat cgagaccata ggatcaaaca atttccctgc
     1441 tgtgccgcag gcgcgtaacg ttggcgcgct tcccctaatt cataaagagg acgctcccaa
     1501 tgcgaacacc a
//
LOCUS       DATCUD010000174         2506 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101186, whole genome shotgun sequence.
ACCESSION   DATCUD010000174 DATCUD010000000
VERSION     DATCUD010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101186"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1056
                     /locus_tag="VIQ99_02445"
     CDS             <1..1056
                     /locus_tag="VIQ99_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009024915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HEY9182028.1"
                     /translation="NYNGMKMVREGSRPISADTGLEDIKALAERNDFGPPMSAPGKVR
                     SVDVKPQYIEHLLSYVDVKALAPLKIVVNAGNGGAGPIVDLLEPHLPFEFVKVFHEPD
                     GSFPNGVPNPMIVENRAVTIERVRTERADLGVAWDGDYDRCFFFDELGQFIEGYYIVG
                     LLAETFLAKSRGERIVHDPRLTWNTLDLVARGGGTTVQSKSGHAFIKQRMREVDAVYG
                     GEMSAHHYFRQFSYADSGMIPWLLITEIMSRRGASLSTLVGERMRAFPASGEINRKVK
                     DAAAVIARVEAAYTPKAVAVDRTDGLSVEFADWRFNLRSSNTEPLLRLNVESRSNEAL
                     MQARTAELLALLGGEPG"
     gene            1064..>2506
                     /locus_tag="VIQ99_02450"
     CDS             1064..>2506
                     /locus_tag="VIQ99_02450"
                     /inference="COORDINATES: protein motif:HMM:NF025052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9182029.1"
                     /translation="MARRRAPRPRRPGRPALVAALLDPRCYDHPVEAVRVVETHISWV
                     FLTGRYAYKVKKPLKLPFLDFSTLRLRHRFCREELRLNRRVAPEIYLDVVPIGGPPTS
                     PRVGRKPAIEYAVKMLEFDSDARLDRQIRADRVPRAAIAAFAERLAEFHRSLPPIRGK
                     VVADAAADSALRNVADLGRELPSGRKRELDELRAWTERECEHLAEVFVRRAAAGAHRE
                     CHGDLHLENLLIRDGTIVAFDALEFDAKLREIDVISEAGFLAMDLIAHRRADLAFAFL
                     NRYLEVSGDYTSVDVLRFYLVYRALVRAKVSAIKRAQSGGGETGRDPYVRTALELTKV
                     HRPLLLITHGLSGSGKTHVTDELVWRLPALRIRSDLERKRAYGLAALARTGSAVGRGL
                     YGPKKRDRTYATLGSIADRLLRAGHSTIVDATFLRRADRQAFREIAAAHGARFVILDC
                     TASKAELERRIVARASSARDASEATLAVLAA"
BASE COUNT          401 a          835 c          864 g          406 t
ORIGIN      
        1 aactacaacg gcatgaagat ggtccgcgag gggtcgcgtc cgatcagcgc cgacacgggg
       61 ctcgaggaca tcaaggcgct cgccgagcgc aacgacttcg ggcctccgat gtccgcgccc
      121 ggcaaggtcc gtagcgtcga cgtgaagccg cagtacatcg agcacctgct gtcctacgtc
      181 gacgtgaagg cgctggcgcc gctcaagatc gtcgtgaacg ccggcaacgg tggcgccggc
      241 ccgatcgtcg atctgctcga gccgcacctt cccttcgagt tcgtgaaggt cttccacgag
      301 ccggacggca gcttcccgaa cggcgtgccg aacccgatga tcgtcgagaa ccgcgcggtc
      361 acgatcgagc gagtacgcac cgagcgcgcc gacttaggtg tggcttggga cggcgattac
      421 gatcggtgct tcttcttcga cgagctcggt cagttcatcg agggctacta catcgtcggc
      481 ctgctcgccg agacgttcct cgcgaagtcg cgcggcgagc gcatcgtcca cgatccgcgc
      541 ctgacctgga acacgctgga cctcgtcgcc cgcggcggcg gcacgaccgt gcagagcaag
      601 tccgggcatg ccttcatcaa gcagcgcatg cgtgaggtcg atgccgtcta cggcggcgag
      661 atgagcgcgc accattactt ccgtcaattc tcgtacgcag acagcggcat gatcccgtgg
      721 ttgctgatca cggagatcat gagccggcgc ggtgcctccc tgtcgacgct cgtcggcgag
      781 cggatgcgcg cgtttcccgc gagcggcgag atcaatcgca aggtcaagga cgcggccgcg
      841 gtgattgcgc gcgtcgaggc cgcctatacg ccgaaggccg tcgcggtcga ccgcacggac
      901 gggctcagcg tcgagttcgc cgactggcgc ttcaacttgc ggtcatcgaa taccgagccg
      961 ctgctgcggt tgaacgtcga gagccgcagc aacgaggcct tgatgcaggc gcggaccgcc
     1021 gagctgctgg ctctgctcgg cggagagccg ggctaggcgc ggcgtggcac gccggcgcgc
     1081 acctcgaccg cgccgcccgg gccggcccgc gctcgtcgcc gcgctcttgg atccgcgctg
     1141 ctacgaccac cccgtcgagg cggttcgcgt cgtcgagacg cacatctcgt gggtgttcct
     1201 gaccggccgc tacgcgtaca aggtcaagaa gccgctcaag cttccgttcc tcgatttcag
     1261 cacactgagg cttcgccatc gtttctgccg cgaagagctg cgtctgaaca ggcgcgtggc
     1321 gccggagatt tacctggacg tcgtcccgat cggcgggccg cccacgtcgc cgcgcgtggg
     1381 ccgaaagccg gcgatcgagt atgcggtcaa gatgctcgag ttcgattcgg acgcacggct
     1441 cgaccggcag atccgagccg atcgggttcc gcgcgccgcg atcgcggcgt tcgcggagcg
     1501 cctggcggaa tttcaccgca gtcttccgcc gatccggggc aaggttgtcg cagacgccgc
     1561 cgccgacagc gcgctccgca acgttgcgga tctcggtcgt gagctcccga gcggacggaa
     1621 acgggagctc gatgagctgc gggcctggac ggagcgcgag tgcgagcatc tcgccgaggt
     1681 gttcgtgcgc cgcgcagcgg ctggggctca ccgcgagtgc cacggcgacc tgcacctcga
     1741 gaatctgctg attcgcgacg gcacgatcgt cgcattcgat gcgctcgagt tcgacgcgaa
     1801 gctgcgcgag atcgacgtga tcagcgaggc cgggttcctc gcgatggatc tgatcgcgca
     1861 tcgcagagcc gatctggcat tcgctttcct gaaccgctac ctcgaggtaa gcggcgacta
     1921 cacgagcgtc gacgtgctgc ggttctacct cgtgtaccgc gcactcgtga gagccaaggt
     1981 cagtgcgatc aagcgtgcac agagcggcgg cggcgagacg ggccgcgatc cgtacgtgcg
     2041 taccgcgctc gagctgacga aggtgcatcg gccgctgctg ctgatcacgc acgggctctc
     2101 gggcagcggc aagacgcacg tcacggacga gctggtttgg cgcctgcccg cgttgcggat
     2161 ccggtcggac ctcgagcgca agcgcgcgta tggcctcgcc gcgctcgcac gaacgggctc
     2221 ggccgtaggc cgcggcctgt atggcccgaa gaagcgcgac cggacctacg cgaccttggg
     2281 ctcgatcgcg gatcgactgt tgcgcgcggg acacagcacg atcgtcgatg cgacgttcct
     2341 gcgacgcgcg gatcgtcagg cgttccgcga aattgcggcc gcccacggcg cgcggttcgt
     2401 gatcctcgat tgcacggcga gcaaagcgga gctcgagcgg cggatcgtgg ctcgggcctc
     2461 gagcgcccgc gacgcctcgg aggcgactct ggccgtcctc gcggcg
//
LOCUS       DATCUD010000175         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23215, whole genome shotgun sequence.
ACCESSION   DATCUD010000175 DATCUD010000000
VERSION     DATCUD010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23215"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..154)
                     /locus_tag="VIQ99_02455"
     CDS             complement(2..154)
                     /locus_tag="VIQ99_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002631649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5989 family protein"
                     /protein_id="HEY9182030.1"
                     /translation="MLDLLSDFWAFMRERKKWWLGPILVTMLLLSALIVLTQGSAVAP
                     FIYALF"
     gene            complement(154..567)
                     /locus_tag="VIQ99_02460"
     CDS             complement(154..567)
                     /locus_tag="VIQ99_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007355069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SxtJ family membrane protein"
                     /protein_id="HEY9182031.1"
                     /translation="MAAPHTIPTLDRKGLRDFGLLTGGIVAVLFGLFFPWLLERPWPR
                     WPWILFGVLGGMALIAPLALQPIYKGWMQLGLLLNRITTPLILGIVFFLVISPIGLVR
                     RLRRHDAMARSFDSQVPTYRVPSQAKPSESLKRPF"
     gene            complement(583..>1530)
                     /locus_tag="VIQ99_02465"
     CDS             complement(583..>1530)
                     /locus_tag="VIQ99_02465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase C-terminal
                     domain-containing protein"
                     /protein_id="HEY9182032.1"
                     /translation="RETGLTSLCMAGGVALNCVANGRVQRETPFKEIFIQPAAGDAGG
                     ALGAAATVWHQYDAQPRRVNGHDRMHGGFVGPRFGDADIRAQLDAFGASYEELDDTAM
                     FARLAELLEQENVIGWFQGRMEFGPRALGGRSIIGDPRSAKMQSVMNLKIKYRESFRP
                     FAPSVLAERVGDYFEQKGASPYMLIVAPIREELRLPLTPEQQKLFGIEKLKLKRSELP
                     AITHVDYSARIQTVHADTNPRYYALLKAFEQRTGCGVLVNTSFNVRGEPIVGSPTDAY
                     RCFMRTEMDYLVVENFLLDKSKQPVWKKDDSWQSEFELD"
BASE COUNT          280 a          498 c          489 g          263 t
ORIGIN      
        1 gctagaacag cgcgtagatg aacggcgcca cggccgaacc ctgcgtcagc acgatcaggg
       61 ccgagagcag cagcatggtg accagaatgg ggcccagcca ccacttcttg cgctcgcgca
      121 tgaaggccca gaaatcgctg agtaagtcca acatcagaac ggtctcttga gggattcgct
      181 tggtttcgct tggctcggca ctcggtacgt cgggacctga gagtcgaacg accgcgccat
      241 cgcgtcgtga cgccgcaaac gccgcaccag cccgatcggg gagatcacga gaaagaacac
      301 gatgccgagg atcaacggcg tcgttatgcg gttcaacagc agcccgagct gcatccagcc
      361 tttgtagatc ggctgcaggg caagcggcgc gatcagcgcc atgccgccta gcacgccgaa
      421 cagtatccat ggccatcgcg gccacggtcg ctcgagcaac cacggaaaga acaggccgaa
      481 cagaaccgcg acgataccgc cggtcagaag accgaagtcg cgcagtccct tgcgatcgag
      541 cgtcggaatc gtgtgtggag ccgccatcag tgcctcacgc gctcaatcga gctcgaactc
      601 ggattgccac gagtcgtcct tcttccacac gggttgcttg ctcttgtcga gcaggaaatt
      661 ctcgacgacc aggtagtcca tctcggtacg catgaagcag cggtaggcat cggtcgggct
      721 gccgacgatc ggctcgccgc gcacgttgaa cgacgtgttc acgagcacgc cgcaacccgt
      781 gcgctgctcg aatgctttca gcagcgcgta gtagcgcggg ttcgtgtcgg cgtgcacggt
      841 ttggatccgg gccgaatagt cgacgtgcgt gatcgccggc agctccgagc gcttgagctt
      901 gagcttctcg atgccgaaca atttttgctg ctcgggcgtc agcggcagcc gcagctcctc
      961 gcggatcggc gccacgatca gcatgtaagg gcttgcgcct ttctgctcga agtaatcgcc
     1021 gacgcgctcg gcgagcacgg atggcgcgaa cggccggaac gactctcgat acttgatctt
     1081 gaggttcatg accgactgca tcttcgcgct gcgcgggtcg ccgatgatcg agcgtccgcc
     1141 gagcgcgcgc ggtccgaact ccatgcgtcc ttggaaccaa ccgattacgt tctcctgctc
     1201 gagcagctcg gcgagccgcg cgaacatcgc ggtatcgtcg agctcctcgt agctcgcgcc
     1261 gaacgcatcg agctgcgcac gtatgtcggc gtcgccgaat cgcggcccga cgaagccgcc
     1321 gtgcatgcgg tcgtggccgt tcacgcggcg cggctgcgcg tcgtactggt gccagaccgt
     1381 ggccgcggcg ccgagcgcgc cgccggcatc gccggccgcc ggctggatga agatctcctt
     1441 gaacggggtt tcccgctgca cgcggccgtt ggccacgcag ttgagggcca cgcccccggc
     1501 catgcacagg ctggtgaggc ccgtttcccg
//
LOCUS       DATCUD010000176         1569 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44375, whole genome shotgun sequence.
ACCESSION   DATCUD010000176 DATCUD010000000
VERSION     DATCUD010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44375"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..1201)
                     /gene="recA"
                     /locus_tag="VIQ99_02470"
     CDS             complement(143..1201)
                     /gene="recA"
                     /locus_tag="VIQ99_02470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009147626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEY9182033.1"
                     /translation="MDDNRKKALSAALGQIEKQFGKGSVMRLGDAIAARDIDVVSTGS
                     IGLDVALGIGGLPRGRIIEIYGPESSGKTTLTLQVVAEVQKLGGTAAFVDAEHALDPS
                     YAGKVGVNVDDLLISQPDTGEQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEMG
                     DSHMGLQARLMSQALRKLTGNIKRSNCLVIFINQIRMKIGVMFGNPETTTGGNALKFY
                     ASVRLDIRRTGSIKKGEEVIGSETRVKVVKNKVAPPFKTAEFEILYGVGISREGEIVD
                     LGVKQNIIEKSGAWYSFNGDRIGQGKENARDFLLEHKDVAAAIEKKIRAELLPAKKGP
                     VEVPTATAAEEEGAALQA"
     gene            complement(1366..>1569)
                     /locus_tag="VIQ99_02475"
     CDS             complement(1366..>1569)
                     /locus_tag="VIQ99_02475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEY9182034.1"
                     /translation="ERLAERGFRADERIYRPHVTLARRARPVEAEVEPVRWRVEDLAL
                     VESFPDGRNVHYEVLERWPLAPK"
BASE COUNT          243 a          539 c          485 g          302 t
ORIGIN      
        1 cgacacgacg tcgtccggaa agccgcgcgc cgagagcttt cgcgtgagct ctcggcggct
       61 gtgctcgcgc cgcgcgagga gctcgagcgc gacgcgcgtg caagcgggct cgtcgacggc
      121 ggccccttcc gccgcggcga cgtcaggctt ggagcgccgc accctcctcc tcggccgccg
      181 ttgccgtggg cacctcgacg gggcccttct tcgccggcaa cagctcggcg cggatcttct
      241 tctcgatcgc cgccgcgacg tccttgtgct cgagcaagaa gtcgcgcgcg ttctccttgc
      301 cttggccgat tcggtcgccg ttgaagctgt accaggcgcc cgacttctcg atgatgttct
      361 gcttgacgcc gaggtcgacg atttcgcctt cgcgcgagat gccgacgccg tacagaatct
      421 cgaactcggc cgtcttgaac ggcggcgcga ctttgttctt gacgaccttc acgcgcgttt
      481 cgctgccgat gacctcttcg cccttcttga tcgagccggt tcgccggatg tccagccgca
      541 ccgacgcgta gaacttcaac gcgttgccac ccgtcgtcgt ctcggggttg ccgaacatga
      601 cgccgatctt catgcggatt tggttgatga agatcacgag gcagttcgaa cgcttgatgt
      661 tgccggtgag cttgcgcagc gcctgcgaca tcagccgcgc ctggaggccc atgtgcgagt
      721 cgcccatctc gccctcgatc tcggccttcg gcgtcaacgc cgcgaccgag tcgacgacga
      781 caacgtcgac ggcgccggag cgtacgagca tgtccgtgat ttcgagcgct tgctcgcccg
      841 tatcgggctg cgagatcaag agatcgtcga cgttgacgcc gactttaccg gcgtacgaag
      901 gatcgagcgc atgctcggcg tcgacgaacg ccgccgtgcc gccgagcttt tgcacctcgg
      961 ccacgacttg cagcgtgagc gtggtcttgc cggaggactc cgggccgtaa atctcgatga
     1021 tgcggcctcg cggcaatccg ccgatgccga gcgccacgtc gagcccgatc gacccggtcg
     1081 acacgacgtc gatgtcgcgc gcggcgatcg cgtcgcccag gcgcatcacg gaacccttgc
     1141 cgaactgttt ctcgatttgg cccaaggccg cggataacgc ttttttccgg ttgtcgtcca
     1201 ttttcccgtc caatgaattt gagtgagtag ccggtacgtc cggcggcggc gcgcgacggg
     1261 attattccac aggtgccggc ggcgacgagt cgcgcgaatc gccccacaag gcacagaaat
     1321 tccgagtcgc tattgaagct cgatactggt gttttgtcca gtacttcatt tcggcgccaa
     1381 cggccaccgc tcgagcacct cgtagtgcac gttgcgaccg tccggaaacg actcgaccag
     1441 cgccaaatcc tcgacgcgcc agcgcaccgg ctcgacttcc gcctcgaccg gtcgcgcgcg
     1501 acgcgccagc gtgacgtgcg gccgatagat ccgttcgtcg gcgcgaaacc ctcgctccgc
     1561 gagccgctc
//
LOCUS       DATCUD010000177         2309 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65840, whole genome shotgun sequence.
ACCESSION   DATCUD010000177 DATCUD010000000
VERSION     DATCUD010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65840"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(71..772)
                     /locus_tag="VIQ99_02480"
     CDS             complement(71..772)
                     /locus_tag="VIQ99_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015331220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182035.1"
                     /translation="MPVIELSAISKHYEMGQQLIKAVDRLDLTIDYNEYVVFIGSSGS
                     GKSTLMNIIGCLDTPTSGRYVLNQRDVSGLDENELADIRNQEIGFIFQSFNLLPRATA
                     LKNVMQPLIYRGLSLADRKAEAERVLERVGLADRADHLPNQLSGGQRQRVAIARALVT
                     SPSILLADEPTGNLDSQTSVEILALFDELHADGQTIIVVTHEPDVAAHGQRVVRLKDG
                     KVLEDRLNERQPTSH"
     gene            complement(779..1993)
                     /locus_tag="VIQ99_02485"
     CDS             complement(779..1993)
                     /locus_tag="VIQ99_02485"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9182036.1"
                     /translation="MNKKLLLIIGIVVLVVAVPLIQARWRGGPTVEVQAEKLEPRSIQ
                     SSVLASGKLVHEEEVKLTTEEIGRVTAIYVEEGAEVKKGQLVLQIDDQRHRAAVDQNQ
                     ATVRMQEIAIQRQQLSVENLRTQWERMRGLHERKLIDEDSFVTATNNLEIAEVDIRSS
                     REQLEQARAQLEQTQDRLAKTSVYSPIDGRVTTLDIKVGETAISSSTNIPGSSLMTIA
                     NPASIHTEVNVDEADIANVSIGQKARVYAIAYPDQPVDGVVDSIAVSAKVAEGQQGQS
                     FAIKIRLLDPEKITLRPGMTCRAEIFTESKADAVAVPIQAILVEEDLTEDETRREVFV
                     VRGDRAVKVPVEVGLSDDTFQEIVSGLSVGDEIITGPDRVLRALEDGDRVVVNNDRNN
                     RGGQSRAAITVD"
     gene            complement(2059..>2309)
                     /locus_tag="VIQ99_02490"
     CDS             complement(2059..>2309)
                     /locus_tag="VIQ99_02490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182037.1"
                     /translation="VRFVGQEGLNPLSFGNLLGVDPTGTPMVQRVLLALDPTVIWSVV
                     LSVFGYQALSQRSIVHAAMVVLGPYVIIVAIAAVLAAS"
BASE COUNT          389 a          759 c          718 g          443 t
ORIGIN      
        1 gccctccgtg gccgcgaacc acagcgggaa ccgcgagccg gccaggttct gaaagcgctt
       61 cgctttcggg ttaatggctg gtcggctggc gctcattgag ccggtcctcc agcaccttgc
      121 cgtccttcag gcgcacgacg cgctggccgt gcgcggccac atcgggctcg tgcgtgacga
      181 cgatgatcgt ttgcccatcc gcgtgcaact catcgaacag cgccaggatc tcgacgctgg
      241 tctgcgaatc gaggttgccg gtcggctcgt cggcgagcag gatcgacggg ctcgtgacga
      301 gcgcccgcgc gatcgcgacg cgctgccgct gtccgcccga cagctggttc ggcaagtgat
      361 cggcacgatc tgcaagaccc acgcgctcga gcacgcgctc ggcctcggct ttgcgatccg
      421 caaggctcaa gccgcggtag atcagcggct gcatcacgtt cttcagcgcc gtcgcgcgcg
      481 gcagcaggtt gaagctctgg aaaatgaagc cgatctcctg gttgcggatg tcggcgagct
      541 cgttctcgtc gaggccgctc acgtcgcgct ggttcagcac gtagcgcccg gacgtcggcg
      601 tgtcgaggca gccgatgatg ttcatcagcg tcgacttgcc ggagcccgag gagccgatga
      661 acacgacgta ctcgttgtag tcgatcgtga gatcgaggcg atcgacggcc ttgatgagct
      721 gttggcccat ctcgtagtgc ttgctgatcg cggacagctc gatgaccggc atcgcagctc
      781 aatccacggt gatcgcagca cgcgactgcc cgccgcgatt gttcctgtcg ttgttcacga
      841 cgactcggtc gccatcctcg agcgcgcgca acacgcggtc ggggcccgtg atgatctcgt
      901 cgccgacgga caagcccgac acgatctcct ggaacgtgtc gtccgagaga ccgacttcga
      961 cggggacctt caccgcgcga tcgcccctga ccacgaacac ctcgcggcgg gtttcgtcct
     1021 cggtgaggtc ctcctcgacc aggatcgcct ggatcggcac ggcgactgcg tcggctttgg
     1081 actccgtgaa gatctccgca cggcaggtca tgccaggtcg cagcgtgatc ttctcgggat
     1141 cgagcagccg gattttgatc gcgaagctct ggccctgctg gccttccgcc accttcgcgg
     1201 acaccgcgat cgagtcgacg acgccgtcga ccggctgatc cggatacgcg attgcgtaca
     1261 cgcgcgcctt ctgaccgatg gacacattcg cgatgtcggc ctcgtcgacg ttgacctcgg
     1321 tgtgaatgct cgcgggattc gcgatcgtca tcaggctcga gcccggaatg ttcgtcgagc
     1381 tcgagattgc agtctcgccg accttgatgt cgagcgtcgt gacgcgaccg tcgatcggcg
     1441 agtacacgct ggtcttcgca agccgatcct gagtctgctc gagctgagcg cgcgcctgct
     1501 cgagctgctc gcggctcgat cgtatgtcga cctcggcgat ctcgaggttg ttcgtcgctg
     1561 tgacgaagct gtcctcgtcg atgagcttgc gctcgtgcag accgcgcatg cgttcccact
     1621 gcgtacgcag gttttcgacc gaaagttgct ggcgctggat cgcgatctct tgcatccgca
     1681 ccgtggcttg attctggtcg acggccgcgc gatgccgttg gtcatcgatc tgcagcacga
     1741 gctgaccctt cttgacctcg gcgccctcct ccacgtagat cgccgtgacg cggccgatct
     1801 cttccgtcgt gagcttcacc tcttcctcgt gcacgagctt gccggaagcg agcaccgacg
     1861 attgaatgct tcgcggttcg agcttctcgg cttgaacctc gacggtgggc ccgccgcgcc
     1921 aacgagcctg aatcagcggc acggccacaa cgagcacgac gatgccgata atcaacaaca
     1981 acttcttgtt catggacccg gagccagcta gctttccaac aacgtatata cggccgcggc
     2041 cgacgaggta ttacagccct aacttgccgc gagcactgcg gcaatcgcaa cgatgatgac
     2101 gtaaggcccg agcaccacca tcgccgcgtg cacgatcgag cgttgcgaga gcgcctgata
     2161 gccgaacacg ctcagcacga cgctccagat cacggtggga tcgagcgcga gcaggacgcg
     2221 ttgcaccatc ggcgtgcccg tgggatcgac gccgagcagg ttgccgaacg acagcgggtt
     2281 caagccctcc tgtccgacga aacgcacgt
//
LOCUS       DATCUD010000178         1770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23267, whole genome shotgun sequence.
ACCESSION   DATCUD010000178 DATCUD010000000
VERSION     DATCUD010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23267"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            63..461
                     /locus_tag="VIQ99_02495"
     CDS             63..461
                     /locus_tag="VIQ99_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006131995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9182038.1"
                     /translation="MLADRIDHLVLTVDDIEATLRFYERALGLAGDLFLGPDGQTRYA
                     LTFGKQKINLQDRSTATPTKARRPTFGSGDFCLIAAVPLDNVIAHLEAEGVAIEAGPV
                     PRRGALGALRSIYFRDPDGNLVEVAEYVST"
     gene            complement(468..>1770)
                     /locus_tag="VIQ99_02500"
     CDS             complement(468..>1770)
                     /locus_tag="VIQ99_02500"
                     /inference="COORDINATES: protein motif:HMM:NF019352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HEY9182039.1"
                     /translation="VLEFALEARVADVEILPGIKTSAWTYNGTVPGPFIHAKVGDRVI
                     IHFKNSLPESTTIHWHGLRVPNDMDGAPGVTQTPIEPGGEFHYEYTLTDAGTYWYHPH
                     IDSSAQVGRGLYGAILVEDPADPTAFGDDLVMILSDMGLNEQGELLPADTGGNFGDLF
                     GREGAVLLVNGKVKPTLKVRNGKQQRWRIINATRARYYNLRLRNHRFMRLGGDNGLAA
                     RSEDIYNLILTPGERVDAVFTPADAPGSRNVLRWVPTERGYGSTFNRAAEEMLYIETV
                     ADAPVTPEPIPVELRTIEPIDVQGVTARTLELTIAITSTVEMGINGIPYWKTKPIEAV
                     IGETQVWRIVNNTDFSHPFHLHGYFFQVLDDKRVPEWKDTVNVPTKSEITIAVRFDDR
                     PGAWMYHCHILDHAEAGMMGTLIVRDPNAPVTDAPPPVHKH"
BASE COUNT          288 a          582 c          571 g          329 t
ORIGIN      
        1 cgctacaaat gtttgctgac gctcggcaag cgcctgcgcg gcgagccggt cggcgcgtga
       61 gcctgctcgc ggatcgcatc gatcatctcg tcctcaccgt cgacgacatc gaggcgacgc
      121 ttaggttcta cgagcgcgcg ctcggactcg cgggcgatct gtttctcggc cccgacggcc
      181 agacgcgcta cgcgctgacc ttcggcaaac agaagatcaa cctccaggac cgcagcaccg
      241 cgacgccgac gaaggcgcgc cggccgacat tcggctccgg cgatttctgc ttgatcgcgg
      301 ccgtgccgct cgacaacgtc atcgcgcact tagaggcgga aggcgtcgcg atcgaggccg
      361 gccccgtgcc gcggcgcggc gcgctcggcg cgcttcgctc gatctacttc cgcgatcccg
      421 acggcaacct cgtcgaggtc gccgaatacg tctcgacctg atcgagccta gtgcttgtga
      481 accggcggcg gcgcatccgt gaccggtgcg ttcgggtcgc gcacgatgag cgtgcccatc
      541 atgccggcct cggcgtgatc gaggatgtga cagtgataca tccacgcacc gggccgatcg
      601 tcgaaccgca ccgcgatcgt gatttccgat ttcgtcggca cgttgaccgt gtccttccac
      661 tccggcacgc gcttgtcgtc cagcacttgg aagaagtagc cgtgcaggtg gaacgggtga
      721 gagaaatccg tgttgttcac gatgcgccag acctgcgtct cgccgatcac ggcctcgatt
      781 ggctttgtct tccagtacgg aatcccgttg atccccatct cgacggtcga cgtgatcgcg
      841 atcgtgagct cgagcgtgcg cgcggtcacg ccttgcacgt cgatcggctc gatcgtgcgc
      901 agctcgaccg ggatgggctc gggcgttacc ggcgcgtccg cgacggtctc gatgtacagc
      961 atctcctcgg cggcgcggtt gaacgtgctg ccgtaaccgc gctcggtcgg aacccaacgc
     1021 agcacgttgc ggctgcccgg tgcgtcggcc ggcgtgaaca ccgcatccac gcgttcaccc
     1081 ggcgtcaaga tcaggttgta aatgtcctcg gagcgcgccg cgagcccgtt gtcgccgccc
     1141 aagcgcatga agcggtgatt gcgcaggcgt aagttgtagt agcgagcgcg cgtcgcattg
     1201 atgatgcgcc agcgctgctg cttaccgttg cgcaccttca gcgtcggttt gactttgccg
     1261 ttcacgagca gcacggcgcc ttcacggccg aacaagtcac cgaagttgcc gccggtgtcg
     1321 gccggcaata gctccccctg ctcgttcaat cccatgtcgg acaggatcat gacgaggtcg
     1381 tcgccgaacg cggtggggtc ggccgggtcc tccacgagga tcgcgccgta gagtccgcgg
     1441 ccgacctgcg cagacgagtc gatgtgcggg tgataccagt acgtgccggc gtcggtcagc
     1501 gtgtactcgt aatgaaactc gccgcccggc tcgataggcg tctgagtgac gccgggagcg
     1561 ccatccatgt cgttcggcac acgcagaccg tgccagtgaa tcgtcgtcga ctccggcagc
     1621 gagttcttga agtggatgat cacacggtcg ccgaccttgg cgtgaatgaa cggacccggg
     1681 accgtgccat tgtaggtcca cgcgctcgtc ttgattccgg gcaagatctc gacgtccgcg
     1741 acccgggctt cgagtgcgaa ctcgagcacg
//
LOCUS       DATCUD010000179         2753 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101242, whole genome shotgun sequence.
ACCESSION   DATCUD010000179 DATCUD010000000
VERSION     DATCUD010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2753)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2753)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2753
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101242"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VIQ99_02505"
     CDS             complement(<1..392)
                     /locus_tag="VIQ99_02505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEY9182040.1"
                     /translation="MSDRRDLELVLDSGTPLVLIETSDEVRLLELLRDLARSRSTTAY
                     RPLFRWSITDGLQRLDLDLEAQRHNAEPQDVLKHIRAVDKPGVYALLDFHPFLREPVN
                     VRLLKDIALTASATKVTVLLIGHRLDIP"
     gene            complement(504..1199)
                     /locus_tag="VIQ99_02510"
     CDS             complement(504..1199)
                     /locus_tag="VIQ99_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182041.1"
                     /translation="MGRLRLLALAVAVPLIGACGITARIEPYKQSDAVIAEGEHVVVL
                     ARKQHSNHEAEEDFVQCVSDGLAKGDDGLDVHASKEFEDKLYPWFEPSTAPLSTDDLT
                     ALLERPGVLDQVKSTGVRYLLWLDGSTDRTASGGGITCAAGVGGAGCMGLAWWEDDSR
                     YDVTVWDIQDLESEGTIHADYKGRSVMPAIVIPIPLITRPQVHACRGLADQIRQFLTQ
                     PHGYEADSEPGVG"
     gene            complement(1201..1758)
                     /locus_tag="VIQ99_02515"
     CDS             complement(1201..1758)
                     /locus_tag="VIQ99_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182042.1"
                     /translation="MGVIIPDELYNFIHTEDIPEQSLWTIALGDANVAMLEPLFKSMF
                     RETTDVDAVPVSGDASLDGVIEPKLDKFEFDVPIGERDEFVEVWMQYQINVYEPDGAT
                     VLQWAVAGYGKSELDKDQEDAVQRAAIVAMREAGATISTKFSEQPQIKEWLEGKGYGT
                     SVAAGQQAAGSDSTVGVASAPPLAQ"
     gene            complement(2079..2558)
                     /locus_tag="VIQ99_02520"
     CDS             complement(2079..2558)
                     /locus_tag="VIQ99_02520"
                     /inference="COORDINATES: protein motif:HMM:NF012894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY9182043.1"
                     /translation="MRKRSEGRDQGLHLSRAGTRGADRFVIQLLDKDSFPSGSAALEP
                     SSLEALAKIGLLVSGMTGAITVSGHTDNVPIRNGGQYRSNWELSAARAASVAHELLAA
                     GLDPARLMVSGHADTQPRVLNDSPANRALNRRVDITFANGRDRPGRWTDALPADPSQ"
     gene            complement(2480..>2753)
                     /locus_tag="VIQ99_02525"
     CDS             complement(2480..>2753)
                     /locus_tag="VIQ99_02525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182044.1"
                     /translation="LRPRTGSKERTLDLATLIGLIGTCIVVGTAIVFGGSVGAFVDTA
                     SLVLVVGGTLLVTLMKFSFRQFANAAKVAIKAFIYRVPEPEAPIDS"
BASE COUNT          497 a          872 c          890 g          494 t
ORIGIN      
        1 tgaggaatgt cgagccgatg cccgatcaac aagaccgtga ccttcgtcgc cgacgcggtc
       61 agtgcgatgt ccttgagcag gcggacattg acgggctccc tcaagaacgg gtgaaagtcg
      121 agcaaggcgt agacgcccgg cttatcgacc gcgcggatgt gtttcagcac gtcctgcggc
      181 tctgcgttgt ggcgctgagc ttcgaggtcg agatcgaggc gctgcaggcc gtcggtgatc
      241 gaccaccgga acaatggtcg ataggccgtc gtcgagcgcg accgggccag atcgcgtaac
      301 agctcgagga gtcgcacctc atcgctggtc tcgatcaaga ccaacggtgt tccggagtcg
      361 agaacgagct caaggtcgcg gcggtcgctc attgatcacg gcccgcagcg gtgcagggct
      421 ccatcacgag agtgcggaca ctctataggg tccgaccttg gccgaccgcg accgagtcgg
      481 caaatcgcgt cagcgtgcct ggcctagccc acgccgggtt cggagtccgc ctcgtagccg
      541 tgcggctgcg tgaggaactg gcgaatctga tccgcgaggc cacgacaggc gtggacctgt
      601 ggccgcgtga tcaacggtat cggaatcacg atggcgggca tcacggagcg gcccttgtag
      661 tcggcatgga tcgttccttc cgactcgaga tcctggatgt cccacaccgt gacgtcgtaa
      721 cgcgagtcgt cttcccacca cgcaagtccc atgcacccgg cgccgccgac gccggccgcg
      781 caggtgatgc cgccgccgct cgcggttcga tcggtcgacc catcgagcca cagcaggtag
      841 cgaaccccgg tgctcttgac ctgatcgagc acgccggggc gttccagcag cgcggtaagg
      901 tcgtcggtgc tgagcggcgc agtggacggc tcgaaccatg ggtacagttt gtcctcgaac
      961 tccttcgagg cgtgaacgtc caggccgtca tcgcctttcg cgaggccgtc actgacgcac
     1021 tgcacgaagt cttcttcggc ttcgtggttc gagtgttgct ttcgggcgag caccacgacg
     1081 tgctcaccct cggcgatcac ggcgtcgctc tgcttgtagg gctcgatgcg cgccgtgatt
     1141 ccgcacgcgc cgatcaacgg cacggcgacg gcgagggcga gtagacgaag cctgcccacg
     1201 ttactgagcg agcggcggag ccgacgcgac cccgaccgtc gaatcgcttc cagctgcctg
     1261 ttgtccggcc gcgacggatg tcccataccc tttcccctcc aaccattctt tgatttgagg
     1321 ctgctcactg aacttggtcg agatcgtcgc gcctgcttcc cgcatggcca cgatggccgc
     1381 acgctgcacg gcatcttcct ggtccttgtc caactcggac ttgccatacc cggccaccgc
     1441 ccactgcagc accgtggcgc cgtccggctc gtagacgttg atctgatatt gcatccaaac
     1501 ctcgacgaac tcgtcgcgct cgccgatcgg gacgtcgaac tcgaatttat cgagcttcgg
     1561 ctcgatcacg ccgtccaggg aggcgtcgcc ggacacgggc acggcgtcga cgtccgtcgt
     1621 ctctcggaac atgctcttga aaagcggctc cagcattgcg acgttggcgt cgccgagcgc
     1681 gatcgtccaa agggactgct cggggatgtc ctcggtgtga atgaagttgt agagctcgtc
     1741 gggaatgatg actcccatcc taaccggtaa cggttcgatc agaggtgtcg gaaaggtcga
     1801 ttcgacgatg accgacgacg agccgcaacc gacgagacag gcgccgaccg cgacgcctag
     1861 ccagcatcgc ttggaacgtc ctacaaacgt cggagccatg cggtgaattc tacgccccga
     1921 acgggcaaat tgagtccgga ttcaacgtta acaccgaaac gagacggcca aaagacctcg
     1981 gctccacgcg gcctctgacc gccgtcgcga ggaaaaattc acggccgttg aacgttccgc
     2041 ctggatcgtg ggacgcggtt gtcggcgccg gagcgggttt actgcgaggg gtcggctggc
     2101 agtgcgtcgg tccaccgtcc ggggcgatcg cggccgttcg cgaacgtgat gtcgacgcgg
     2161 cgattcaatg cccgattcgc agggctgtcg ttcaggacgc gtggctgtgt gtcggcatgg
     2221 ccgctgacca tcagcctcgc tggatcgagc ccggccgcga gcagctcgtg tgcgaccgaa
     2281 gcggcgcgcg cggcagagag ctcccagttc gaccggtact gaccgccgtt cctgatcgga
     2341 acgttgtcgg tgtggcccga gacggtgatc gcgccggtca taccggagac gagcaaaccg
     2401 atcttggcaa gagcttcgag agagctcggc tcgagcgcgg cgctgccgga cgggaacgag
     2461 tccttgtcga gcagctggat tacgaatcga tcggcgcctc gggttccggc acgcgataga
     2521 tgaaggcctt gatcgcgacc ttcgctgcgt ttgcgaattg gcggaagctg aacttcatca
     2581 gcgtcacgag cagggtgccg ccgacgacga gcaccaacga cgccgtgtcg acgaacgcac
     2641 cgacggagcc gccgaacacg atcgcggtgc cgacgacgat gcaggtgccg atgaggccta
     2701 tcagtgtcgc taggtccaag gtcctttcct tcgagccagt ccgaggccgc agt
//
LOCUS       DATCUD010000180         1731 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_72918, whole genome shotgun sequence.
ACCESSION   DATCUD010000180 DATCUD010000000
VERSION     DATCUD010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72918"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            101..400
                     /locus_tag="VIQ99_02530"
     CDS             101..400
                     /locus_tag="VIQ99_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182045.1"
                     /translation="MPDSKKWISSLSENRAGKVVADRAGSRWQWDSEDETQRLLKLLE
                     NDELAIEKTDIRPVPKRTQAPDVPAATTTSQPLKPKRDSGGGFNPYDHAGKTRRR"
     gene            complement(397..564)
                     /locus_tag="VIQ99_02535"
     CDS             complement(397..564)
                     /locus_tag="VIQ99_02535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182046.1"
                     /translation="MVEYEGRSRNNVYRRGWRPNTVHTGDTISFDIAPMRTGEDGGYV
                     KTFITREGKEL"
     gene            689..1042
                     /locus_tag="VIQ99_02540"
     CDS             689..1042
                     /locus_tag="VIQ99_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182047.1"
                     /translation="MTKTTKIDQVTFVGGSGRRYDCRIYVWDTKFKSVPGVYVVASRT
                     MDPGQPARYEALFVGEAADLSAALKDHPRDDCFQMYYANVIGVLKEDNPQTRAAILAD
                     LLAGLAPPCNAADAV"
     gene            1054..1332
                     /locus_tag="VIQ99_02545"
     CDS             1054..1332
                     /locus_tag="VIQ99_02545"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9182048.1"
                     /translation="MSRHIRHEPDAQRFVIDRAGLTALIQYRALDDGTLDLYRTYTPP
                     ALRGGGLASRLTEHALRYARDHGHKIVPSCPFVATFIARHPEHRDLVV"
     gene            1374..>1731
                     /locus_tag="VIQ99_02550"
     CDS             1374..>1731
                     /locus_tag="VIQ99_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020563695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY9182049.1"
                     /translation="MRRLAALFYDLLLLVALLFSFTLVVIALRLGEPVPPDSFWFPSC
                     LLAIVMAFFCGFWVLGGQTVGMRAWRIRLVTNDGGRVGWLRACGRFCAALLAFAPAGL
                     GFWWAMRDEHKRSWHDL"
BASE COUNT          294 a          555 c          544 g          338 t
ORIGIN      
        1 cgattggaga tcttgaagcc ccctgtagag ctcggcctcg cggtcgggct ctcttttttc
       61 cgatacactt tagccatcaa ggggttcggc gtgatactga atgccagact cgaagaagtg
      121 gatcagctct ctgagcgaga atcgggcggg caaggtcgtc gcggaccggg cgggtagccg
      181 ctggcagtgg gattcggaag acgaaacgca gcggttgttg aagctgctcg agaatgacga
      241 gctcgcgatc gagaagaccg acattcggcc ggtcccgaag cggacccagg cccctgacgt
      301 ccctgccgca acgacgacga gccagccact gaagcccaaa cgcgattcgg gcggcggctt
      361 caacccttat gaccatgccg gcaagacgcg gcgtcgctag agctccttgc cctccctcgt
      421 gatgaaggtc ttcacgtagc cgccgtcttc gccggtccgc atcggtgcga tatcgaagct
      481 gatcgtatcg cccgtatgaa ccgtgttcgg gcgccaaccg cggcgataaa cattgttgcg
      541 actgcgccct tcgtactcca ccacgcgcgc gggcgcccca aaaagaatgc agcacggtac
      601 gcagtcgacg cgccgtggcg aaacgcacag tcctgccgag cggcgccttc tataatgtgc
      661 ccactgcaaa caatgcgagc gatatctcgt gacgaagacg accaagatcg atcaggtgac
      721 tttcgtcggt ggctccggcc gccgctacga ctgccggatc tacgtctggg atacgaagtt
      781 caagtcggtt cccggcgtgt atgtcgtcgc ttcccgcacg atggatccgg gacagccggc
      841 gcgctacgag gccttgttcg ttggcgaggc agccgatttg tcggccgcgc tcaaggacca
      901 cccgcgcgac gattgctttc agatgtacta cgcgaacgtg atcggcgtgc tgaaggagga
      961 caatccacag actcgggcgg cgatcctcgc ggatctcctc gcaggcctcg ccccgccctg
     1021 caacgctgcg gacgccgtat agacttcatc cgtatgtcga ggcatatccg ccacgagccg
     1081 gacgcacagc gtttcgtgat cgaccgtgcc ggcctgacgg cgctgattca atatcgcgcg
     1141 ctcgacgacg gcacgctcga tctctaccgt acgtacaccc ctcccgcgct gcgcggcggc
     1201 ggcctcgcgt cgcgactgac cgagcacgcg ctgcgttatg cgcgcgacca cggccacaag
     1261 atcgtgccga gctgtccgtt cgttgcaacg ttcatcgcgc gacaccccga gcatcgagat
     1321 ctcgtcgtct gaacgcagag agacccaagc tccacctcga gccggcgccc ctgttgcggc
     1381 ggctcgcggc cttgttctac gacctgctgc tactcgttgc gttgttgttc tcgttcacgc
     1441 tggtcgtgat tgcgctccgg ctcggcgagc ccgtgccgcc cgacagcttt tggttcccgt
     1501 catgcttgct cgcaatcgtg atggcgttct tctgtggttt ctgggtgctc ggcggccaga
     1561 ccgtcgggat gcgggcttgg cgcatacgcc tggtcacgaa cgatggcggc cgcgtcgggt
     1621 ggctacgggc atgcggacgt ttttgtgcgg ccctgttggc gttcgcgccg gcggggctcg
     1681 gcttctggtg ggcaatgcgc gatgagcaca agcggagctg gcacgatctg t
//
LOCUS       DATCUD010000181         1610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_80063, whole genome shotgun sequence.
ACCESSION   DATCUD010000181 DATCUD010000000
VERSION     DATCUD010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80063"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VIQ99_02555"
     CDS             <1..721
                     /locus_tag="VIQ99_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3362 domain-containing protein"
                     /protein_id="HEY9182050.1"
                     /translation="LNTNHAPLIHLYRKARELPGIKKVLIASGVRYDLAIESPEYVKE
                     LAQHHTGGYLKIAPEAIGEGPLSKMMKPGVGTYYKFKQLFDRYSQAAGKEQYLIPYFI
                     AAHPGTTDEDMLELALWLKKNGYRADQVQAFLPGPMATATAMYHSGKNPLKRVTRTSE
                     EVTVPKGLKVRRLHKAFLRYHDPNNWPVLRAALKRMGRADLIGNGKHQLVPRFQPKGT
                     GLTDDRTRRGKNKPFRTQHVR"
     gene            complement(741..1157)
                     /locus_tag="VIQ99_02560"
     CDS             complement(741..1157)
                     /locus_tag="VIQ99_02560"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182051.1"
                     /translation="MAFRHTTLGPLGAAAIALPATAHHSHGNYQQYFVDLEGTVTEVQ
                     LINPHSWIYLDVVGANGELVSWALEATGTGGLARLGVVSGYVKPGDKIKVRCHPLRDG
                     TEGCLLGFVQAADGSIKDWDGGQALPVDDGFFDLKQ"
     gene            complement(1189..>1610)
                     /locus_tag="VIQ99_02565"
     CDS             complement(1189..>1610)
                     /locus_tag="VIQ99_02565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182052.1"
                     /translation="ATSGRGQWKIDLRGALVYASWQLMQRDAKVTSYIWAFVDLVEGH
                     RLQMTNNADQSRTFASVHMHENKLYVLEATAPRGMHGQEQFQQSLGWLDEDGIALRYV
                     DVYSNADIYLSGHTPPGRVNRAGTDANSGQGRIDAPR"
BASE COUNT          296 a          525 c          509 g          280 t
ORIGIN      
        1 tctgaacacg aatcacgcgc cgctgatcca tctctatcgg aaagcgcgcg agctgcccgg
       61 tatcaagaag gtgctgatcg cgtcgggcgt gcgctacgac ctcgcgatcg agtcgcccga
      121 gtacgtgaag gaactcgcgc agcatcatac gggcggctac ctcaagatcg cgcccgaggc
      181 gatcggcgaa gggccgctgt cgaaaatgat gaagcccggc gtcggcacgt attacaagtt
      241 caagcagctg ttcgaccgct actcgcaagc ggccggcaag gagcagtacc tgatcccgta
      301 cttcatcgca gcgcatcccg gcaccaccga cgaggacatg ctcgagcttg cgctatggct
      361 caagaagaac ggctatcgcg cggatcaagt gcaggcgttc ctgccgggac cgatggcgac
      421 ggccacggcg atgtatcact ccggcaagaa tccgctgaag cgcgtgacgc gcacgtccga
      481 ggaggtcacg gttccgaagg gcctcaaggt ccggcggctg cacaaagcct tcctgcgtta
      541 ccacgatccg aacaattggc ccgtgttgcg cgcggccctg aagcgcatgg ggcgcgcgga
      601 cctgatcggc aacggcaagc atcagctcgt accgagattc cagccgaagg gcactggcct
      661 cacggacgat cgcacgcggc gaggcaagaa caaaccgttc cgcacgcagc acgtgcggtg
      721 acgccgcgcg cggccgcgcc ttactgtttc agatcgaaga acccgtcgtc gacgggcaag
      781 gcctggccgc catcccaatc cttgatcgag ccgtcggcgg cctggacaaa gccgagcaga
      841 caaccttccg ttccatccct gagcgggtgg caacgcacct tgattttgtc accgggtttc
      901 acgtagccgc tcacgacacc gagccgcgcg agacctccgg tccccgtcgc ttcgagcgcc
      961 cacgaaacga gctcgccgtt cgcgcccacg acgtccagat agatccacga gtgcgggttg
     1021 atgagctgca cctccgtgac cgtgccttcg aggtcgacga agtactgctg gtagttgccg
     1081 tgcgagtggt gcgccgtcgc cggtaacgcg atcgccgcgg cgccgagggg gccaagggtg
     1141 gtgtgcctga atgccatgcc gactctcctt gagcgccgag cgtgctcgtt accgcggggc
     1201 gtcgatgcgt ccttggccgg aattcgcgtc cgtgccggcg cggttcacgc gccccggagg
     1261 cgtgtggccg ctcaagtaga tgtccgcgtt gctgtacacg tcgacgtagc gcaacgcgat
     1321 cccgtcctcg tcgagccagc cgagcgactg ctggaactgt tcctggccgt gcatgccgcg
     1381 cggcgccgta gcctcgagga cgtagagctt gttctcatgc atgtggaccg acgcgaacgt
     1441 tcgcgattgg tccgcgttgt tcgtcatctg taaccgatgc ccttctacga gatcgacgaa
     1501 cgcccagatg taactcgtga ccttggcatc gcgttgcatg agctgccagc tcgcgtaaac
     1561 gagcgctccg cggaggtcga tcttccattg gccacgtccg ctcgtggcga
//
LOCUS       DATCUD010000182         4144 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8931, whole genome shotgun sequence.
ACCESSION   DATCUD010000182 DATCUD010000000
VERSION     DATCUD010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8931"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1519)
                     /gene="ettA"
                     /locus_tag="VIQ99_02570"
     CDS             complement(<1..1519)
                     /gene="ettA"
                     /locus_tag="VIQ99_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEY9182053.1"
                     /translation="MAQYIFTMNRVGKVVPPKRYILRDISLSFFPGAKIGVLGLNGSG
                     KSTLLRIMAGVDKDYEGEARPQPGIKIGFLTQEPALDDSKNVKGVVEEGVADLLALVK
                     RFNEISDKFAEPLEDDEMNRLLEEQGKLQDKIDAVGGWELERKLEIAADALRLPPWEA
                     SVKSLSGGERRRVALCRLLLSNPDMLLLDEPTNHLDAESVAWLERFLKEFPGTVIAVT
                     HDRYFLDNVAGWILELDRGHGIPWQGNYSSWLEQKEQRLKLEEKQEVARQRTIKTELE
                     WVRTNPGARRAKAKARLARFEELTSKEFQARNETNEIYIPPGPRLGELVIEADKIGKS
                     FGDRVLFENLSFSLPPGGIVGVIGPNGAGKTTLFRILAGTEKPDTGAIRRGSTVQLAY
                     VDQSRDSLNNDKTVWDEISHGQDIMRVGAYETPSRAYVGRFNFRGTDQQKKVGLLSGG
                     ERNRVHLAKLLASGGNLLLLDEPTNDLDVETLRALEDALLNFPGSAVVISHDRWFL"
     gene            complement(1592..2359)
                     /locus_tag="VIQ99_02575"
     CDS             complement(1592..2359)
                     /locus_tag="VIQ99_02575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182054.1"
                     /translation="MSPSRTAYGFVLVCLSASACEVPTLAVIPETIGDDVADVLVDVR
                     RYSDETIVYTDCLKAELAAAGGDAAPASVRSVLVARNNHAVAEHKATTDLYAERVGPL
                     ANLSLAEYVAGESRDCLQGSVIEHTGVVNDGAVIFFLGNRQAYLNVLQAACPGLERDG
                     EFFVGNSAPTGTPTSPSGMRAVIPGPPGPFTGAPLSRRVCTQDHIFPYKEGGSRRVVG
                     CNLGRFFPMSEDQALQILTALGGAGTATSERAASDAE"
     gene            complement(2373..2804)
                     /locus_tag="VIQ99_02580"
     CDS             complement(2373..2804)
                     /locus_tag="VIQ99_02580"
                     /inference="COORDINATES: protein motif:HMM:NF022526.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2780 domain-containing protein"
                     /protein_id="HEY9182055.1"
                     /translation="MNRRWTLVLLTALPAVAVAQSLDSIKSLMSDPLVGGLKSTLGIT
                     DAQAEGGLGSILTLAQEKLAKGDFDKIAQVVPGSQKYLDAAKKLGAVTGPLTNSAGLN
                     SAFSKLGIAPDKAAKFTPTVLDAVGTVGGDSVKNLLADALK"
     gene            3045..3989
                     /locus_tag="VIQ99_02585"
     CDS             3045..3989
                     /locus_tag="VIQ99_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018295028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoin utilization protein AcuC"
                     /protein_id="HEY9182056.1"
                     /translation="MSHAVLLIAGPELAAYGFPNDHPFGPDRYAAFMTGLERSRVAPT
                     LERRPPRLATREELLWFHTPEYVERVAELSERGSGLLDAGDTPAFPGVYEAAAHVVGG
                     TLEALAAIVTGPVRRAFIPIGGLHHATRNSAAGFCVFNDCGVAIEAARRVHGIRRVAY
                     VDIDAHHGDGVFYAFEQDPDVLFADLHEDGRFLYPGTGSRSETGRGPAAGTKLNIPLP
                     PGADDTAFHAGWDEVEAYLDAAKPELILLQCGADSLAGDPITHLQLTAEAHAHAARRL
                     GVLADRYASGRVLGMGGGGYNRSNLARAWTRVVEELAE"
     gene            3994..>4144
                     /locus_tag="VIQ99_02590"
     CDS             3994..>4144
                     /locus_tag="VIQ99_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004920757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY9182057.1"
                     /translation="MHCPFCNFEDTKVIDSRLAGEGRQVRRRRECLSCGERFTTFEGP
                     ELVMPY"
BASE COUNT          641 a         1374 c         1381 g          748 t
ORIGIN      
        1 ccaagaacca gcgatcgtgc gagatcacga cggcgctgcc cgggaagttc aacagcgcat
       61 cctcgagcgc gcgcagcgtc tcgacgtcga gatcgttggt cggctcgtcg agcaacagca
      121 ggttgccgcc ggaggccaag agcttcgcga gatggacgcg gttgcgctcg ccgccggaga
      181 gcagaccgac cttcttttgc tggtccgtgc cgcggaagtt gaagcggccg acgtaggccc
      241 gcgacggggt ctcgtacgcg ccgacgcgca tgatgtcctg cccgtgactg atttcgtccc
      301 aaacggtctt gtcgttgttc aggctgtcgc ggctctgatc gacgtaggcg agctgcacgg
      361 tcgagccgcg gcggatcgcg ccggtgtccg gtttctccgt ccccgcgaga atgcggaaca
      421 gcgtcgtctt gccggcgccg ttcgggccga tcacgccgac gatgccgccg ggcggcaagc
      481 tgaacgacag gttctcgaac agcacgcggt caccgaacga cttgccgatc ttgtcggcct
      541 cgatcacgag ctcgccgagc cgcgggccgg gcggaatata gatctcgttc gtctcgttgc
      601 gcgcttggaa ctccttcgac gtgagctcct cgaagcgcgc gagccgcgcc ttggccttcg
      661 ctcggcgcgc ccccgggttc gtgcggaccc actcgagctc ggtcttgatc gtgcgttgtc
      721 gcgcgacttc ctgtttctcc tcgagcttca ggcgttgctc cttctgctcg agccacgagc
      781 tgtagttgcc ctgccacggg atgccgtggc cgcggtcgag ctccaagatc cagccggcga
      841 cgttgtcgag gaaatagcga tcgtgcgtga ctgcgatgac ggtgccgggg aactccttca
      901 ggaaccgctc gagccaggcg accgactccg catcgagatg gttcgtgggc tcgtcgagca
      961 gcagcatgtc ggggttcgac aacagcaggc gacacagcgc gacgcggcgg cgctcgccgc
     1021 ccgacaggga cttcacgctc gcctcccacg gcggcaggcg caaggcatcg gccgcgatct
     1081 cgagcttgcg ctcgagctcc cacccaccga ccgcgtcgat cttgtcttgg agcttgcctt
     1141 gctcctcgag gagcctgttc atctcgtcgt cttcgagcgg ctcggcgaac ttgtcgctga
     1201 tctcgttgaa gcgcttcacg agcgcgagca aatcggcgac gccttcctcg acgacgcctt
     1261 tgacgttctt cgagtcgtcg agcgcgggct cttgcgttag gaagccgatc ttgatgccgg
     1321 gttgcgggcg tgcctcgccc tcgtagtcct tgtccacgcc cgccatgatt cgcagcagcg
     1381 tcgattttcc cgagccgttc aggccgagca cgccgatctt ggcgcccggg aagaagctca
     1441 ggctgatgtc gcgcaggatg tagcgtttcg gcggcacgac cttgccgacg cgattcatcg
     1501 tgaaaatgta ctgggccatg ggttttgcag ttgcgagcgg ggcgaggatt atccgtggcc
     1561 gcgccacgcc tcggcaacta tgcgagcggc gttactcggc gtcggatgcg gccctttcgc
     1621 tcgtcgcagt tccggctccg ccgagagccg tgagtatctg cagtgcttgg tcttccgaca
     1681 tggggaagaa gcgcccgagg ttgcacccga cgacgcgccg cgacccgccc tctttgtagg
     1741 ggaagatgtg atcctgagtg caaacccgtc ggctcagtgg cgcgccggtg aagggtcccg
     1801 ggggtcccgg aattaccgcg cgcattccgc tggggctggt gggggtgccc gtgggggcag
     1861 agttgccgac gaagaactcg ccgtcgcgtt cgagccccgg acatgcggct tgcagaacgt
     1921 tcaaatacgc ctgcctgttg ccgaggaaga agatcacggc gccgtcgttc acgacgccgg
     1981 tgtgctcgat cacggagcct tgcaggcagt cccggctttc cccggcgaca tactcggcga
     2041 ggctgagatt cgcgagcgga cccacgcgct cggcgtaaag atccgtggtc gccttgtgct
     2101 cagcgaccgc atgattgttg cgcgcgacga gcaccgaccg cacggacgcc ggcgccgcat
     2161 cacctccggc ggccgcgagc tcggccttga ggcagtccgt gtagacgatc gtctcgtcgg
     2221 aatagcggcg cacgtccacc agcacgtctg cgacgtcgtc gccgatggtc tcgggtatca
     2281 ccgcgagcgt cggaacttcg cacgccgacg cgctcaagca cacgaggacg aacccgtacg
     2341 cggtgcggct cggtgacatg cgatgctcct agctacttca acgcgtccgc gagcaagttc
     2401 ttgaccgagt ctccgcctac cgtgccgacc gcatcgagca cggtcggtgt gaacttcgcg
     2461 gccttgtcgg gtgcgatgcc gagcttcgag aacgcggagt ttaggccggc ggagttcgtg
     2521 agcggccctg tcacggcgcc gagcttcttg gccgcgtcga gatacttctg tgagccgggc
     2581 acgacctgcg cgatcttgtc gaagtcgcct ttcgcgagct tttcttgcgc gagcgtcaag
     2641 atcgacccca agccgccctc tgcttgcgcg tccgtgatgc cgagcgtcga cttcaacccg
     2701 ccgacgagcg gatcggacat gagcgacttg atgctgtcga gcgattgggc gacggcgacg
     2761 gcgggcaatg ccgtgagcaa aacgagtgtc cacctgcgat tcatggctaa ttctctttgg
     2821 ttcttgtcgt ggacaggacg gaggatacgc ccggggagtg ccgtgctcca ctggccgagc
     2881 ccccgaattt ccccctgttt tcccccggca acctgccggc cgtaaacttg actcgggagt
     2941 cagaaacggt ctgggcttca gccttggagc cctcgtggct gccggcccga agccgctcgg
     3001 cgtcgacacc gtcgcgagcg gttcatggta gaaaaggacg gactatgtcg cacgcagtgc
     3061 tgctgatcgc gggacccgag ctcgccgcct acggcttccc gaatgaccac cctttcggcc
     3121 cggatcgcta cgccgcgttc atgaccgggc tcgagcgctc gcgtgtcgcg ccgacgctcg
     3181 agcgaaggcc gccgcggttg gcgactcgcg aggagcttct gtggtttcac acgcccgagt
     3241 acgtcgagcg cgtcgcggag ctctccgagc gcggcagcgg gctgctcgat gccggcgaca
     3301 cgccggcgtt tccgggcgtg tatgaagcgg ccgcgcacgt cgtcggcggc acgctcgagg
     3361 cactcgcggc gatcgtgacg ggtcccgtgc gacgtgcatt cattccgatc ggcgggctgc
     3421 accacgcgac gcgtaacagc gcggctgggt tctgcgtgtt caacgactgc ggcgtcgcga
     3481 tcgaggccgc gcggcgcgtg cacggcattc gtcgcgtcgc gtacgtcgac atcgacgcgc
     3541 atcacggcga cggcgtgttc tacgcgttcg agcaggaccc ggatgttctg ttcgccgact
     3601 tgcacgagga cggtcgattc ctgtatcccg gcaccggcag ccgcagcgag accggccgcg
     3661 gcccagccgc aggcacgaag ctgaacatcc cgttgccgcc cggcgccgac gacacggcct
     3721 tccacgccgg atgggacgaa gtcgaggcgt acctcgacgc ggccaaaccg gagctgatcc
     3781 tgctgcaatg cggcgccgac tcgctggcag gcgacccgat cacgcacctg cagttgaccg
     3841 cggaagccca cgcgcacgct gcgcgccggc tcggcgtgct cgcggaccgt tacgcgagcg
     3901 gccgcgtgct cggcatgggc ggcggcggct acaaccgctc gaacctcgcg cgcgcgtgga
     3961 cccgcgtcgt cgaagagctc gccgagtaac gccgtgcatt gtcccttctg caatttcgag
     4021 gacacaaaag tcatcgactc gcgcttggcc ggcgaaggac gacaggtccg ccgccgccgc
     4081 gaatgcctgt cgtgcggcga gcgcttcacg acgttcgaag gccccgagct cgtgatgccg
     4141 tacg
//
LOCUS       DATCUD010000183         3047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16184, whole genome shotgun sequence.
ACCESSION   DATCUD010000183 DATCUD010000000
VERSION     DATCUD010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3047
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16184"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2404
                     /gene="bamA"
                     /locus_tag="VIQ99_02595"
     CDS             <1..2404
                     /gene="bamA"
                     /locus_tag="VIQ99_02595"
                     /inference="COORDINATES: protein motif:HMM:TIGR03303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEY9182058.1"
                     /translation="QDVRLMKNLCARVVQCAVLCAAVLASTAAFTAFEPFVVRNFRVE
                     GAQRIAQGTIYNYLPINIGDTVDEALLREAGRAIFQTGFFQDFEFRRDGDTLVIVVLE
                     RPSILEFTFDGNKDIKDEDLEKVLTENGLSAGKTFDRSTLEQLTQSLTDEYYGRGKYG
                     ARVTPTVEPLEDNRVRVSIQIEEGDRAKIRQVNIVGNTAFEEQDIIADFELNTGNLLS
                     FIRKNDRYSKEALEGDLEKLRSYYMDRGFADFRADDVQVAISPDKRDIFVTISITEGA
                     RYTISEVKLAGDMVIPEEQLRGLILAQPGQIFSQALLTSTEELMGLRLGQDGYAFAEI
                     RAVPELNEETKEASVTFFVDPRNRVYVRRINFNGADNVNDEVFRREMRQMEGGYLSNT
                     LVDQSKLFVQRLPYVESVESETTPVPGSADLVDVDFEIEEGLPGQFGGSLGYSETYGL
                     TLGGNFIHSNFMGTGRRVALELSGGEYQKVYSINFTDPYRTIDGVGRTISLSYQDFTQ
                     FTSATSDFSTTTFSAGMNWGYPIANFQRLNFGFAYQDAELLTSAYSSLQALQWVANNG
                     EPFNAPQGLIGTKVKSLEISAGWAYDTRNAALFPTAGTRFQMGLNASVPGSEVEYFVT
                     SMNFTKYVNLPGAWMIRLNSDLSFGDAFGETTALPPFRNRYAGGPGSVRGFKESYLGP
                     RDSLGNPYGGNLLFVNQFELVIPTPEKISGSTRMALFYDVGNVFSTGGVSFFDRLGDP
                     MEYDFDYDNLKKSVGIGVEWLAPLGLLRFSYAMPLNDDDLTDRYYGDETEGFQFSIGN
                     AF"
     gene            2428..2976
                     /locus_tag="VIQ99_02600"
     CDS             2428..2976
                     /locus_tag="VIQ99_02600"
                     /inference="COORDINATES: protein motif:HMM:NF015871.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEY9182059.1"
                     /translation="MIGSKLPLVAVFLGAALTTSVVHAQATLKIGVVNVARLIQEAPG
                     AEAVQKKLQEEFGQRQRDIAAMQQRITTQTETFQRDAPVMGEEERANLERQIRDARRE
                     LERTQNVYVEDLNLRQNEELGRLQREVLEKAQQYARAQQFDLLLADPNVIFASTAVDI
                     TPAVLATMKPAAAAPAAPAPSR"
BASE COUNT          610 a          905 c          953 g          579 t
ORIGIN      
        1 tcaggatgtt cggctcatga agaatctttg cgctcgcgtc gtgcagtgcg ccgtgctctg
       61 cgccgccgtc ttggcgagca ccgcggcgtt cacggcgttc gagccgttcg tcgttcgcaa
      121 cttccgggtc gaaggcgcgc agcgaatcgc acaaggcacc atctacaact acctgccgat
      181 caacatcggc gacaccgtcg acgaggcgct gctgcgcgaa gcgggccgcg cgatatttca
      241 gaccgggttc ttccaggatt tcgagtttcg ccgtgacggc gacacgctcg tgatcgtcgt
      301 gctcgagcgg ccgtcgattc tcgagttcac gttcgacggc aacaaggaca tcaaggacga
      361 ggacctcgag aaggtcctca cggagaacgg gctctcggcg ggcaagacct tcgatcgctc
      421 tacgctcgag cagctcacgc agtcgttgac ggacgagtac tacggacgcg gcaagtacgg
      481 cgcgagggtt acgccgacgg tggagccgct cgaagacaac cgtgtgcgcg tgtcgatcca
      541 gatcgaggag ggggatcgcg cgaagattcg ccaggtcaac atcgtaggca acacggcatt
      601 cgaagagcag gacatcattg cggacttcga gctcaatacc ggcaacttgt tgtcgttcat
      661 cagaaagaac gaccgttact cgaaggaagc gctcgagggc gatctcgaga agctgcgctc
      721 ctactacatg gaccgcgggt ttgccgattt tcgcgccgac gacgtgcagg tcgcgatctc
      781 gccggacaaa cgcgacatct tcgtcacgat cagcatcacc gagggcgctc gctacacgat
      841 ttccgaggtc aagctcgccg gcgacatggt tattccggaa gagcagctac gcggcctgat
      901 tctggctcag ccgggccaga tattctcgca ggcgctgctg acgtcgaccg aggagctgat
      961 gggtttgcgg ctcggccagg acggctatgc gtttgcagag attcgcgcag tgcccgagct
     1021 caacgaggag accaaggaag cgtccgtcac gttcttcgtg gatccgcgca atcgcgtcta
     1081 cgttcgccgt atcaatttca acggcgccga caacgtgaac gacgaggtgt ttcgccgcga
     1141 gatgcggcag atggagggcg gctacctatc caacacgctc gtggatcagt cgaagctatt
     1201 cgtgcagcgc ttgccctacg tcgaatccgt cgaaagcgag acgactccgg tgcccggcag
     1261 cgcggatctc gtggacgtcg atttcgagat cgaagaggga ttgccgggcc agttcggcgg
     1321 cagcctcggc tactccgaga cgtacggcct gacgctcggc ggcaacttca tccactcgaa
     1381 tttcatgggc accggccggc gcgtcgcgct cgagctctcc ggcggcgagt atcagaaggt
     1441 ctacagcatc aacttcacgg atccgtaccg cacgatcgat ggtgtcgggc gaacgatctc
     1501 gctgtcgtat caagacttca cccagttcac gtcggcgacg tcggacttct cgaccacgac
     1561 gttctcggcg ggcatgaact ggggttatcc gatcgcgaat ttccagcgcc tgaatttcgg
     1621 cttcgcgtat caggacgccg agctcttgac gagcgcctac agttcgctgc aggcgctcca
     1681 gtgggttgcg aacaacggcg agccgttcaa tgcgccccaa ggcctaatcg gcaccaaggt
     1741 caagagcctc gagatctccg ccgggtgggc gtacgacacg cgtaatgcgg cgctgtttcc
     1801 gacggctggc acccgctttc agatgggact gaatgcatcc gtgcccggta gcgaagtcga
     1861 gtatttcgtc acgagcatga atttcacgaa gtacgtgaac ctgcccggcg cctggatgat
     1921 caggctcaac agcgacctgt cgttcggcga tgctttcggc gaaacgaccg cgttgccacc
     1981 gtttcgtaac cgttacgccg gtggaccggg atcggtgcgc ggtttcaagg aaagctactt
     2041 gggcccgagg gactcgctcg gcaatcctta tggcggcaac ctgctgttcg taaatcaatt
     2101 cgagctcgtg attccgaccc cggaaaagat ctcgggctcg acgcgaatgg cgttgttcta
     2161 tgacgtcgga aacgtgttct cgacgggcgg tgtgtcgttc ttcgacaggc tcggcgatcc
     2221 catggagtat gatttcgact atgataactt gaagaaatcc gtgggcatcg gcgtggaatg
     2281 gctggctccg ctcggtctat tgcggttcag ctacgcaatg ccgctgaacg acgatgacct
     2341 aacggatcgg tactacggcg atgagacgga gggcttccag ttctccatcg gcaacgcctt
     2401 ctaacgcttg tgttaaggaa taacgtcatg atcggttcga aattgcctct cgtcgccgtg
     2461 ttcttgggtg cggcgctcac aacgagcgtg gtgcatgcgc aggcgacgct gaagatcggc
     2521 gtcgtcaacg tcgcgcggtt gattcaggaa gcgccgggcg cggaagccgt ccagaagaag
     2581 ctccaagagg agttcgggca acgccaacgc gacatcgcgg cgatgcagca acgcatcacg
     2641 acccagaccg agacgtttca acgcgatgcg ccggtgatgg gcgaagaaga acgcgcgaac
     2701 ctcgagcggc aaattcgcga cgcgcggcgt gagctcgagc gtacgcagaa cgtatacgtc
     2761 gaggatctga acctgcgtca aaacgaggag ctcggcagat tgcagcgcga ggtgctcgag
     2821 aaggctcagc agtacgcacg agcgcaacaa ttcgacctgc tgctggccga tcccaacgtg
     2881 attttcgcca gcaccgccgt ggacatcacg ccggccgtgc tcgcaaccat gaagccggcg
     2941 gcagccgcgc ccgcggcgcc ggcacccagt cgctaacccg cgcagctttt agcggtgttc
     3001 gatggccgcg accttaggtg agctcgcggc ccgcttcggc tgcgagc
//
LOCUS       DATCUD010000184         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2044, whole genome shotgun sequence.
ACCESSION   DATCUD010000184 DATCUD010000000
VERSION     DATCUD010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2044"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1249
                     /locus_tag="VIQ99_02605"
     CDS             <1..1249
                     /locus_tag="VIQ99_02605"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CorA family divalent cation transporter"
                     /protein_id="HEY9182060.1"
                     /translation="FFLDADVAILTVELCANDVPLDRAQDMVFRFGRAYPAWWTSAGE
                     GGNCLRLVEWLDAAGRVLAISDYEQKPNFLSYVAKHRTPYLASHWQFLLKPLGLEHPG
                     QTAALRYRQLEHYRMPLMVYMALDDPTVLSRADFVRLGLVTRPGTKESLPYSSRSLEQ
                     FEREFCDDRFWGREGEHFSGDARLICTGVLLAVVGRHGDMFFDGRETGMLGQFKHQYF
                     LLFLIAHFHKAALLSMSDELAVAMNRLEVGDTESVRHFKRTIRQSMEVFLRFTHRYWF
                     HEVSNQDLARAIFSRLSRHLGNDALYDEVRSEVADMNEYLDTDSARRQAQTILRLTVV
                     TICGLIGTVATGFLGMNVLAEADSPLLWRVFLFLVILVATGAITLYTVVKSKVLADFL
                     DALSDQRVPWREKWRVLKHSRPG"
     gene            1466..>1859
                     /locus_tag="VIQ99_02610"
     CDS             1466..>1859
                     /locus_tag="VIQ99_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009205024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182061.1"
                     /translation="MASNSAARIEAQSLASAGRPRRSFLVRLFARERALFFAALLIAG
                     AAAGLGAPVDFVLFGLVLAGVALFHHHTLPVALVGLAAIVAYQFVFTGFDTGLGFVGL
                     ERHLSHEWVTLTNLLGLLLGFAVLAKHFD"
BASE COUNT          265 a          597 c          611 g          386 t
ORIGIN      
        1 ttttttcttg gatgccgacg tcgcgattct gaccgtcgag ctctgcgcga acgacgttcc
       61 gctcgatcgc gctcaggaca tggtgttccg cttcggccga gcgtatccgg cctggtggac
      121 gagcgcgggt gagggcggca attgtttgcg tctcgtggaa tggctcgacg ccgcgggtag
      181 ggttctcgcg atatcggact acgagcagaa gccgaatttc ctgagctacg tggccaagca
      241 tcggacgccg tacttggctt cgcactggca gttcctgctg aagccgctgg ggctcgagca
      301 cccagggcaa acggccgcgt tgcgctatcg ccagctcgag cactaccgaa tgccgttgat
      361 ggtgtacatg gcgctcgacg atccgaccgt gctctcgcgc gcagacttcg tgcgtttggg
      421 tctcgtgacg cggccgggca cgaaggagtc gctgccgtac tcgagccgct cgctcgagca
      481 gttcgagcgc gaattctgcg atgaccgctt ctgggggcgc gaaggggagc acttctccgg
      541 cgatgcgcgc ttgatctgca ccggggtcct gctggccgtc gtcggccgtc atggcgatat
      601 gttcttcgac ggccgcgaga ccggcatgct tgggcagttc aagcatcagt acttcctgtt
      661 gttcttgatc gcgcactttc acaaggcggc gttactctcg atgtccgacg agctcgccgt
      721 cgcgatgaac cggctcgagg tcggcgatac ggagtccgtg cgccacttca agcgcacgat
      781 ccggcaatcg atggaggtat tcctgcgctt cacgcatcgc tattggttcc acgaggtctc
      841 gaaccaggac ctggcccgcg cgatcttcag tcggttgagc cggcacctcg gcaacgatgc
      901 tctctacgac gaggtccgca gcgaggtcgc cgacatgaat gagtacctcg acaccgacag
      961 cgcgcggcgc caggcgcaga cgattctgcg cctcacggtc gtcacgatct gcggcttgat
     1021 cggcacggtc gcgacggggt tcctcggcat gaacgtgctc gcggaggccg actcgccgtt
     1081 gctgtggcgc gtattcctgt tcctggtgat cctcgtggcg accggcgcga tcacgctgta
     1141 cacggtcgtg aagtcgaagg tgttggccga cttcctcgac gcgctttcgg accagcgcgt
     1201 gccttggcgc gagaaatggc gcgtgctcaa gcactcgcgc cccggctgag ccagcatcgt
     1261 ttcattgcga tgacggcttg acgtaatcgg tccgcgcgaa gcgcgcactg cgtctcgatc
     1321 tcggcccgcc cgggccgttc acgtcgccga ccggtgacag gtagccagcg accccaacga
     1381 gcggtgcaat ggctgtgcgt cagttcctgc gtgccggacg gcccgctgcc tatactctcg
     1441 cgcgcgtgtg ctcagggagg agcccgtggc ctcgaactct gccgctcgga tcgaagcgca
     1501 atcgctcgcg tcggcaggcc gcccgcgccg atcgttcctc gtgcgactgt tcgcgcggga
     1561 acgagcgctg ttctttgccg cgctcctgat cgcgggggcg gcggccggcc tgggtgcccc
     1621 cgtggacttc gtgctgttcg gcctcgttct cgccggcgtc gcgctgttcc accatcacac
     1681 gctgccggtg gccctggttg gcctcgcggc catcgttgcc taccaattcg tgttcacggg
     1741 cttcgatacg ggtctgggct tcgtcggtct cgagcggcat ctgagtcacg agtgggtcac
     1801 gttgacgaac ctgctcggct tgctgctcgg cttcgcggtg ctcgcgaaac acttcgacg
//
LOCUS       DATCUD010000185         1996 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_8952, whole genome shotgun sequence.
ACCESSION   DATCUD010000185 DATCUD010000000
VERSION     DATCUD010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8952"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1168
                     /locus_tag="VIQ99_02615"
     CDS             <1..1168
                     /locus_tag="VIQ99_02615"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182062.1"
                     /translation="DEVANSIRIGAKQQWSRDDALLGSLIVQDVSTSLDNGNEYDFRL
                     EQQGYSADLQHIRTGRSVQIQSGIVYARQDENSVTRLAFPGLPPMIEGAGESSQLGVY
                     SYAHFNPSAALTLTAGASFDEIDDTFVEDQTWNPKLGVIWRPNARTTLRAAALEVLFG
                     SLTTSTQNPQPRLEPVQVAGFTQLLFGGRADRSKVGSLAIEHEFSSRVFVGWEATERD
                     TDRVAIDAFAQPGDPLIEIALNERGQQAYLYWTPGDRVSVSTRYEHGRFKSDPGDFSG
                     YSEMTTRRLPLELRYFTRGGLTLGARATYVEQEGVFMMSSSTPGPPALQPGHDRFGVL
                     DAFIGYRLPNRRGLLSLNADNLLDESFQFQDIDPTNPSIMPERLVSFRFTLAFD"
     gene            1336..1749
                     /locus_tag="VIQ99_02620"
     CDS             1336..1749
                     /locus_tag="VIQ99_02620"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY9182063.1"
                     /translation="MHEQFARLTRQLRTLELPQGMTPERLSALSVIEKRGPISVTALA
                     DNEMVRPATMSRMVSALVDEGLVKRTEDKSDGRGVLVSTTAKGRRAYQRAQEQRLQHF
                     AEVLASLNADQVAAMRGLTSALERLTVLLDKTSHD"
     gene            complement(1746..>1996)
                     /locus_tag="VIQ99_02625"
     CDS             complement(1746..>1996)
                     /locus_tag="VIQ99_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182064.1"
                     /translation="LAEVAAEQTHLLVVDGLGRGDADVLIRARALTPTLRVIATTDPG
                     RSAERITLAGVASLAKPFSLADLAGAVRRTLDASVPAP"
BASE COUNT          393 a          635 c          623 g          345 t
ORIGIN      
        1 tgacgaggtc gcgaattcga tcaggatcgg cgcgaagcaa caatggtcgc gcgacgacgc
       61 actgctcggc tcgctgatcg tgcaggacgt cagcacctcg ttagacaacg ggaacgagta
      121 cgacttccgc ctggaacagc agggttacag cgccgacctt cagcacattc gcaccggcag
      181 gagcgttcag attcagagcg gcatcgtcta cgcacggcaa gacgagaact cggtgacgcg
      241 cctggcgttc cccggactac ccccaatgat cgaaggtgct ggcgaaagca gccagctcgg
      301 cgtctacagt tacgcccatt tcaacccttc ggcggcatta acgctgacgg cgggtgcgag
      361 ctttgacgag atcgacgaca cgttcgttga ggaccaaacc tggaatccca agctcggcgt
      421 gatctggcgg ccgaacgccc gaacgacgtt gcgcgcggcg gctctcgagg tcctattcgg
      481 ctcgctaacg acgtcgacgc agaatcctca acctcgcctg gagccggtcc aagtcgctgg
      541 ctttacgcag ctgttgttcg gtggtagggc cgaccgttcc aaggtcggca gccttgcgat
      601 cgagcacgag ttttcctcga gggtcttcgt cggttgggaa gcgaccgaac gcgacactga
      661 tcgggtcgcg atcgacgctt tcgcccaacc cggcgacccg ttgatcgaga tcgcactcaa
      721 cgagcgcggg cagcaggcct atctgtactg gactcccggc gatcgcgtca gcgtcagcac
      781 gcgttacgaa cacggccgat tcaaaagcga ccccggcgac ttctccggct actcggaaat
      841 gacgacccgg cggctaccgc tcgagctccg ttattttacg cgcggcggac tcacgctggg
      901 cgcacgtgcc acctacgtcg agcaggaagg cgtgttcatg atgtcctcca gcacgcccgg
      961 gccgcctgcg ctccagcccg ggcatgatcg tttcggcgtt ctcgatgcct tcatcggcta
     1021 ccgattgccg aaccgccggg gattgttgtc gctgaacgcc gacaacctgc tggacgagag
     1081 cttccaattc caggacatcg atcccacgaa cccgagtatc atgccggagc gtttggtgtc
     1141 atttcgtttc accctcgcgt tcgactagac gctgcgggaa tgtgatccca aaacgggttt
     1201 aggttacttg gcaggctcta caatctcctg cgatcgagct accaattaaa aagaatcaaa
     1261 ggcgaggtga gcgcattcat gtcggttcaa ggacctccca cagaagcgga ctcccgttcg
     1321 gagatagccg ctttgttgca tgagcaattc gcgcgcctga cgcgccagct gcgcacgttg
     1381 gagctgccgc agggcatgac gcccgagcgc ctcagcgcgc tttccgttat cgagaaacgc
     1441 ggcccgatct ccgtcacggc gttggccgac aacgagatgg tccggccggc gacgatgtcg
     1501 agaatggtct ctgcgttggt cgacgaaggc ctggtcaagc gcacagagga caagagtgac
     1561 ggccgaggtg tgctggtgag cacgacggcg aagggacgac gcgcatacca acgggcccag
     1621 gaacaacgac tgcaacactt cgctgaagtg ctggcgtcgt tgaacgccga tcaggtcgcc
     1681 gcaatgcgcg gcctaacgtc ggcgctggag cgcctgacgg tgctgctcga caagacctcc
     1741 cacgattaag gcgcagggac ggacgcgtcc agcgttcggc gcaccgcgcc cgcaagatcc
     1801 gccaacgaga acggcttggc gagcgacgcg acgccggcca gcgtgatgcg ctcggccgag
     1861 cgcccgggat cggtcgtggc aatgacccgc agcgtgggcg tcagggcgcg cgcgcggatc
     1921 aacacgtcgg cgtccccgcg cccgagaccg tcgaccacca acaagtgcgt ctgctcggct
     1981 gcgacctctg cgagca
//
LOCUS       DATCUD010000186         2425 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23341, whole genome shotgun sequence.
ACCESSION   DATCUD010000186 DATCUD010000000
VERSION     DATCUD010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2425
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23341"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..319)
                     /gene="rplQ"
                     /locus_tag="VIQ99_02630"
     CDS             complement(<1..319)
                     /gene="rplQ"
                     /locus_tag="VIQ99_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007419207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY9182065.1"
                     /translation="MRHKNSGRRLGRNSPHRRAMYRNLAASLLVHETVRTTLPKAKEL
                     RRVVEPLITLAKEDSVSHRRLAFDRLRDDKAVGVLFKDLGPRFKKRPGGYLRILKTGF
                     RAGD"
     gene            complement(338..1357)
                     /gene="rpoA"
                     /locus_tag="VIQ99_02635"
     CDS             complement(338..1357)
                     /gene="rpoA"
                     /locus_tag="VIQ99_02635"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017640290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEY9182066.1"
                     /translation="MTSATEFLKPRAVKVQPLGTNRARVTVEPFERGFGHTLGNALRR
                     VLLSSMPGAAIVEAEIEGVLHEYTSIEGVQEDVVDILLNLKSIAIKMHSREEAEIQLS
                     KKGPGPVRAGDIVVDHDIEIVNPDLVIANLTKAGEIRAFLKVVRGRGYRPATQIAQFE
                     EQTRPIGRLQLDASFSPIRRVTYTVERARVEQRTDLDKLIVDIETNGTIDAEEAIRRA
                     GVILKNQLDVFVDLQGEDEIGGGRAETQVDPILLRPVDELELTVRSANCLKAENINYI
                     GDLVQRTEVELLRTPNLGKKSLTEIKEVLEQHGLALGMRLDNWPPPGLRSEEPSAPPT
                     SSMAF"
     gene            complement(1374..1994)
                     /gene="rpsD"
                     /locus_tag="VIQ99_02640"
     CDS             complement(1374..1994)
                     /gene="rpsD"
                     /locus_tag="VIQ99_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011399896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEY9182067.1"
                     /translation="MARYRGPTCKLARREGTDLFLKSGLKPLESKCKLEVPPGGAGQR
                     RQRLSDYGVQLREKQKLRRMYGVLERQFRNYYKKATKVKGATGENLLRMLEARLDNVV
                     YRMGFAATRAEARQLVSHRGIKVNEQIVNIPSYQLKAGDKIAVRDRAKEQLRIKSALS
                     IAGQVGFPEWVEVDDKNMQGTLKNLPERDEILPDINENLVVELYSK"
     gene            complement(2007..2420)
                     /gene="rpsK"
                     /locus_tag="VIQ99_02645"
     CDS             complement(2007..2420)
                     /gene="rpsK"
                     /locus_tag="VIQ99_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020651317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEY9182068.1"
                     /translation="MAATPPAAAAAAATKVRKKAKRQILDAVAHVHASFNNTIISITD
                     RQGNTLAWATAGNCGFKGSRKSTPFAAQVAAEKAGNAAKEYGVKNLEVRVNGPGPGRE
                     SAVRALNSVGFRITEIEDVTPIPHNGCRPPKKRRV"
BASE COUNT          370 a          784 c          773 g          498 t
ORIGIN      
        1 agtcgcccgc acggaagccc gtcttcaaga tccggagata gccgcccggg cgcttcttga
       61 agcgcgggcc gagatccttg aacaggacac cgacggcctt gtcgtcgcgc aggcggtcga
      121 acgcgagccg gcggtggctc acgctgtctt ccttcgcgag cgtgatcaag ggctccacga
      181 cgcgccgcag ctccttggcc ttcggcagcg tggtgcgaac ggtctcgtgc accagcagcg
      241 acgccgcgag gttgcggtac atcgcacggc ggtgcggaga gtttctaccg agcctgcggc
      301 ccgaattctt gtgacgcatc gaaaaaactc cggctgatca gaacgccatc gacgaggtcg
      361 gcggcgcgga cggctcctcg ctgcgcagcc ccggcggcgg ccagttgtcg agccgcatgc
      421 cgagcgccaa gccgtgctgc tcgagcactt ctttgatctc ggtcagcgac ttttttccca
      481 agttcggcgt gcgcagcagc tcgacttccg tgcgctgcac gaggtcgccg atgtagttga
      541 tgttctcggc cttcaagcaa ttcgccgagc gaaccgtgag ctcgagctcg tcgacggggc
      601 gcagcaggat cgggtcgacc tgtgtctcgg cgcggccgcc accgatctcg tcttcgccct
      661 ggagatcgac gaacacgtcg agctggttct tcaggatcac gccggcacga cgaatcgcct
      721 cctcggcgtc gatcgtgccg ttcgtctcga tgtcgacgat cagcttgtcg aggtccgtgc
      781 gctgctcgac gcgcgcgcgc tccacagtgt acgtgacgcg tcggattggg ctgaacgagg
      841 cgtcgagctg caagcgaccg atcggccgcg tctgttcctc gaactgcgcg atctgggtgg
      901 cgggccgata cccgcggccg cggacgacct tcaggaacgc gcggatctcg ccggccttcg
      961 tgaggttcgc gatcacgagg tccgggttca cgatctcgat gtcgtggtcg acgacgatgt
     1021 cgccggcacg cacgggaccg gggcccttct tcgagagctg gatctcggct tcctcgcgcg
     1081 agtgcatctt gatcgcgatc gacttcaggt tcaaaagaat gtcgacgacg tcttcctgca
     1141 cgccttcgat gctcgtgtac tcatgcagca cgccctcgat ctcggcctcg acgatcgcgg
     1201 cgccgggcat cgacgaaagc aaaacgcgac gcagcgcgtt gccgagcgtg tgaccgaagc
     1261 cacgctcgaa cggctcgaca gtcacgcggg cgcggttcgt tccgagcggc tggaccttga
     1321 cggcgcgcgg cttcaggaat tcggttgctg atgtcatcta atgatgtcct ctcttacttc
     1381 gagtagagct cgacgaccag attctcgttg atgtccggca ggatctcgtc gcgctcgggc
     1441 aggttcttga gcgtcccctg catgttcttg tcgtcgacct cgacccactc cgggaagccg
     1501 acttggccgg caatcgagag cgcggacttg atcctgagct gctctttggc gcggtcgcga
     1561 accgcgatct tgtcgcccgc cttcagctga tacgacggaa tgttcacgat ctgctcgttg
     1621 accttgatgc cgcggtggct cacgagctgc cgtgcttcgg cacgtgtcgc cgcaaagccc
     1681 atgcggtaca cgacgttgtc gagccgagct tcgagcatgc gcaacaggtt ctcgccggtc
     1741 gcacctttga ccttcgtcgc tttcttgtaa tagttccgga actgccgctc gagcacgccg
     1801 tacatgcgac ggagcttctg cttctcgcgc agctgcacgc cgtagtcgga caaccgctgg
     1861 cgccgctggc cggcaccgcc gggcggtact tcgagcttgc acttcgactc gagcggcttg
     1921 agcccgctct tcaagaagag gtcggtgccc tcgcgacggg caagcttaca tgttgggcct
     1981 ctatatctcg ccatgttttc ttccgcttag acgcgccgct ttttcggcgg gcgacagccg
     2041 ttgtgaggaa tcggggtgac gtcttcgatc tcggtaattc ggaacccgac ggaattcagc
     2101 gcgcgcacgg ccgattcgcg gcccggcccc gggccgttga cccgaacctc gaggttcttc
     2161 acgccgtact ctttggcggc gttgccggcc ttctcggctg caacctgcgc cgcgaacggc
     2221 gtgctcttgc gcgagccttt gaaaccgcag ttgccggcgg tcgcccacgc cagcgtgttc
     2281 ccctgccggt cggtgatgct gatgatcgtg ttgttgaagg acgcgtgaac gtgcgcaacg
     2341 gcgtcgagaa tctgccgttt ggccttcttg cgaaccttcg tggcggccgc cgctgcagcg
     2401 gccgggggtg tagctgccat tagct
//
LOCUS       DATCUD010000187         2849 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65940, whole genome shotgun sequence.
ACCESSION   DATCUD010000187 DATCUD010000000
VERSION     DATCUD010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2849
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65940"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VIQ99_02650"
     CDS             complement(<1..378)
                     /locus_tag="VIQ99_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019623819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY9182069.1"
                     /translation="MDVTDIIDPLNDAQREAVTAPDRPTLVLAGAGSGKTRVLVHRIA
                     WVIRVNGVAAQHVLAVTFTNKAAAEMRDRVEALLGVPTRNLWIGTFHGLSHRLLRIHW
                     REAGLAEGFQIMDSDDQLRMIRRM"
     gene            complement(420..1313)
                     /gene="cyoE"
                     /locus_tag="VIQ99_02655"
     CDS             complement(420..1313)
                     /gene="cyoE"
                     /locus_tag="VIQ99_02655"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020208523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEY9182070.1"
                     /translation="MLTNELGSANLSAHWRDYYALTKPGVVQLLVFTAVVGMFLATPG
                     MVPWEILVTASIGIGLAAAAGAVVNQVLDQRIDAQMARTRNRPLPQGRVSERDALAFA
                     MGLALAGLTVLVVFVNPLTAALTFLSLIGYAVVYTVFLKRATPQNIVIGGAAGATPPV
                     LGWTAVTNAIDPHALLLFLIIFTWTPPHFWALAIARRSDYERADIPMLPVTHGEAVTK
                     LFVLYYTILLIVVTVLPYITGMAGVLYLFGALALGGGFLYYALQLKFAPRQDSPMTTF
                     RYSIWYLMALFSFLLLDHYIQ"
     gene            complement(1285..2259)
                     /locus_tag="VIQ99_02660"
     CDS             complement(1285..2259)
                     /locus_tag="VIQ99_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016352711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY9182071.1"
                     /translation="MNAWFVRLARFGTVLALAVVMLGAWVRLTDAGLGCPDWPGCYGR
                     LVVPDAATPAHELGAEFTRPLEAGKAWREMIHRYLASTLGLVCVALAAIAWRNRRDPR
                     QPWRTPVALVALVVFQGLLGMWTVTLLLKPIVVVAHLFGGFATLALLFSLGRWRTVRV
                     PAPTIGLRTLGVAAVAALVLQIFLGGWTSANYAALACPDFPTCQTQWWPAIADFEEGF
                     VLWRGIGIDYEGGVLDHPARVAVHFTHRLGAILAAVLVAWLGWRLAREAATRLDGSAV
                     LGLLLAQLSLGVSIVWFGVPLAVAVLHNGVAALLLLAVINANQRIRQR"
     gene            complement(2259..2795)
                     /locus_tag="VIQ99_02665"
     CDS             complement(2259..2795)
                     /locus_tag="VIQ99_02665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182072.1"
                     /translation="MRHKSATPWLVALACFGPFLAALLLYYGPWGPSWLPQLPGSREL
                     LAQAVPLPEAWRSGTAAHAWQLIYARMSPCEQQCAQHLGRLLQVQLALGRDREQVQRV
                     VWYVGEQPPLSDSALLARSLDDAAGREVVAALGAAGMAEGRIYVADPQGSVILGYPAD
                     VEQKELLRDLKRLLAGSH"
BASE COUNT          557 a          971 c          925 g          396 t
ORIGIN      
        1 catgcgccgg atcatgcgca gctggtcgtc tgagtccatg atctggaagc cctccgcaag
       61 ccccgcctcc cgccagtgga tcctgagcag gcgatgcgac aggccatgga acgtgccgat
      121 ccagaggttg cgtgtcggca cgccgagcaa cgcctcgacg cggtcgcgca tctcggccgc
      181 ggccttgttc gtgaacgtca ccgcgagcac gtgttgtgcg gccacgccgt tgacgcggat
      241 cacccacgcg atccgatgca cgagcacgcg cgtcttgccg ctgccggcgc cggcgagcac
      301 gagcgtcggc cgatcgggcg ccgtgacggc ctcgcgctgc gcgtcattca gcgggtcgat
      361 gatgtcggta acgtccatgt gtcgcgagac tagccgcgcg ggagcggttt agcgaaacat
      421 cactgaatgt aatggtcgag cagcaggaag ctgaacagcg ccatcaggta ccagatcgaa
      481 tagcggaacg tcgtcatcgg cgagtcctgc cgcggcgcga actttagctg cagcgcgtaa
      541 tacaggaacc cgccgccgag cgcgagcgca ccgaacaaat ataggacgcc cgccatcccc
      601 gtgatgtacg gcaagacggt cacgacgatc aacaaaatcg tgtaatagag cacgaacaat
      661 ttcgttacgg cctcgccgtg agtcacgggc agcatgggaa tgtcggcgcg ctcgtaatcg
      721 gagcgccgag cgatcgcgag cgcccagaaa tgcggcggcg tccacgtgaa gatgatcaga
      781 aacagcagca gcgcgtgggg atcgattgcg ttcgtgacgg cggtccaccc gagcacgggc
      841 ggcgtcgcgc ctgccgcgcc gccgatcacg atgttctgcg gcgtcgcacg tttcaagaac
      901 acggtgtaca cgaccgcgta accgatcagc gacaggaacg tcaacgccgc ggtcaacgga
      961 ttcacgaaca ccacgagcac cgtgagcccc gcgagcgcga gacccatcgc aaatgcgagc
     1021 gcgtcgcgct cgctcacgcg gccttgcggc agtggccggt tgcgcgtgcg ggccatctgc
     1081 gcgtcgatgc gttgatcgag cacttggttc acgaccgcgc cagcggccgc ggcgagtccg
     1141 ataccgatgc tggcagtgac gaggatctcc cacggaacca taccgggcgt cgcgaggaac
     1201 atgccgacga ccgccgtgaa cacgagcaac tgcaccacgc ccggcttcgt gagggcgtag
     1261 tagtcgcgcc aatgcgcgct caagttagcg ctgcctaatt cgttggttag cattgatcac
     1321 ggccaacagg agcaaggcgg cgacgccgtt gtgcaggacg gccacggcca acggcacgcc
     1381 gaaccagacg atactaacac cgaggctgag ctgggccagc aacagtccca acacggccga
     1441 gccatccaac cgcgtggctg cttcgcgcgc gagccgccag ccgagccacg cgacgagcac
     1501 cgcggccagg atcgctccga gccggtgcgt gaagtgcacg gccacgcgcg ccggatggtc
     1561 gagcacgccg ccttcgtagt cgatgccgat ccctcgccac agcacgaagc cctcttcgaa
     1621 atccgcgatc gcaggccacc actgcgtctg acaggttgga aagtccgggc acgcaagcgc
     1681 tgcatagttc gcgctggtcc agccgccgag aaagatctgc agcacgagcg cggctaccgc
     1741 ggcgaccccg agcgtgcgga gaccgatcgt gggcgccggt acccggacag tccgccagcg
     1801 gccgagcgag aacagcaacg caagcgtcgc gaagccaccg aacaagtgcg ccacgacgac
     1861 aatcggcttc agcagcaacg tgaccgtcca catgccgagc aagccttgaa agaccacgag
     1921 cgccacgagc gccacgggcg tccgccacgg ttggcgcgga tcgcggcggt tgcgccacgc
     1981 gatcgcagcc aacgcgacgc aaacgagtcc gagcgtgctc gcgagataac gatgaatcat
     2041 ctcgcgccag gccttgccgg cttcgagcgg tcgcgtgaac tcggcaccga gctcgtgcgc
     2101 gggcgtcgcg gcgtcgggca cgacgaggcg gccgtagcag cccggccaat cgggacagcc
     2161 gagcccggcg tcggtcaggc gcacccaggc gccgagcatg acgacggcga gcgccaggac
     2221 ggtaccgaag cgagcgagac ggacaaacca cgcgttcatc aatgagatcc ggccagcaac
     2281 cgtttgaggt cgcggagcaa ttctttttgt tcgacgtccg ccggatagcc gaggatcacg
     2341 ctaccctgcg ggtccgccac gtatatgcgc ccttccgcca tgcccgcggc accgagcgcc
     2401 gcgacgacct cgcgtccggc cgcgtcatcg aggctccgcg cgagcagcgc gctgtctgaa
     2461 agcggcggct gttcgccgac ataccacacg acccgctgga cctgctcgcg gtctcgaccg
     2521 agcgccagct gcacttgtag gagtcggccg aggtgttgcg cgcattgctg ctcgcacggg
     2581 ctcattcttg catagatcaa ttgccacgcg tgagccgccg tacccgacct ccaggcctcc
     2641 ggcagcggca ccgcttgggc cagcagctcg cggcttcccg gcaactgcgg tagccacgac
     2701 gggccccaag gcccgtaata aaggagcagt gcggccagga acggcccaaa gcacgcgagc
     2761 gccacgagcc atggcgtagc cgatttatgt ctcatgccgt gggcccctcg cagccttcca
     2821 agcgatcacg gctccggccg cgacggccc
//
LOCUS       DATCUD010000188         1881 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_72985, whole genome shotgun sequence.
ACCESSION   DATCUD010000188 DATCUD010000000
VERSION     DATCUD010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72985"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..550
                     /gene="smpB"
                     /locus_tag="VIQ99_02670"
     CDS             80..550
                     /gene="smpB"
                     /locus_tag="VIQ99_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEY9182073.1"
                     /translation="MTKKKESSHASIAQNKKARFDYFIEDRIEAGLALQGWEVKSMRA
                     GKAQLTDSFVIFRDGEAWLLGSHVTPLNTVSTHVVAEPKRTRKLLMNRREIDRLIGLV
                     ERKGYTLIALELYWSKNRVKVAVGLAKGKKQHDKRDTEKDRDWQRDKARALKAH"
     gene            620..975
                     /gene="ssrA"
                     /locus_tag="VIQ99_02675"
     tmRNA           620..975
                     /gene="ssrA"
                     /locus_tag="VIQ99_02675"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(1321..>1881)
                     /locus_tag="VIQ99_02680"
     CDS             complement(1321..>1881)
                     /locus_tag="VIQ99_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014430045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEY9182074.1"
                     /translation="TPRDQKAVRAAAETMRPNPAFSMEQVIGELGVGEALVSLLDEKG
                     RPCVTERALIVPPGSRLGPIDEEARAAIIAASPIAGFYEKVVDRESAYERLKGRAQTA
                     APKERSPSWEHEAPPPRRAPSPEQRNDGGSLANDILFGRRGPRGGRQSTGLIEAMANS
                     AARSVGSQAGRALIRGVLGSLLGGRR"
BASE COUNT          371 a          586 c          593 g          331 t
ORIGIN      
        1 cgcgcgctgc gcttcactgt gggcaagaga tacttccgag cgtgtttttt ggcgatgatt
       61 ctaggatcat tgctcgcgca tgaccaagaa aaaggagtcg agccacgcct cgatcgcaca
      121 aaacaagaag gcgcgcttcg actacttcat cgaggaccgc atcgaagccg gactggcgct
      181 gcagggctgg gaggtcaaga gcatgcgcgc cggcaaggcg cagctcaccg acagcttcgt
      241 gattttccgc gacggcgaag catggttgct gggctcgcat gtgacgccgt tgaacaccgt
      301 gtcgacacac gtcgtcgcgg agccgaaacg cacgcgcaag ctgctgatga accgtcgcga
      361 gatcgatcgg ctgatcgggc tcgtcgagcg caagggttac acgctgatcg cgctggagct
      421 ctattggagc aagaatcgcg tcaaggtcgc cgtgggcctg gccaaaggca agaagcaaca
      481 tgacaaacgc gacacggaga aggaccgcga ctggcaacgc gacaaggcgc gcgcgctgaa
      541 agcgcattga gccgagtggg acttccgccc ttgcaaccac ggcgcgtggc cctaaactaa
      601 gaggcgtgct ttgggggcga ctggcttcga cgtgggtcgc gaaacctgag gtgcatgccg
      661 aggtgcagag tcctcgtgaa accgtctgca aactgttagt tgccaacgac gacaactacg
      721 cactagccgc ctaaaaaccg gcttatgccg tctgactgga gccgtgcttg tgcgtccagg
      781 cccgcaaggg ctttatcagg cgtcatcttc acaagatcgc gacgaggtac gtccgggacc
      841 agatcgctaa gatcctctac ggaatcgccg tcagcgcacc ctgttcgtcg ggttgctgcc
      901 ggttaaaaca atagacgtga ctacgcatgt agagctgatg gcagagggct tgcggacgcg
      961 ggttcgatta acgcaatggt cgcctttgcc cgcgagggca aagtgataac ggggctcaat
     1021 cggtgaaccc tgtgtgactc gacgacgagt cacgtggcaa cgccgagggg tggacgaagg
     1081 ccaacttctt ccgccctgta gagactcata gacgggctga atgcgcgacg catggagcct
     1141 gcactaggat tcggatcggc tgacgattcg gataacacgc cccgctccga cgcctcggtc
     1201 gtgcgaggat cggatgaagg catagtccag cccgtctcga aagagatgga atcgctgtcc
     1261 cgccgcctcc accaattgtc cctctggtcg agagaccaga gggatctatc ctccgcgcga
     1321 ctagcgccgg ccgccgagta gcgagccgag cacgccgcgg atcaacgcgc ggcccgcttg
     1381 cgagccgacc gagcgcgccg cgctgttcgc catcgcttcg atgagccccg tcgattgacg
     1441 gccaccacgc ggtcctcgac ggccgaacaa aatgtcgttg gcgaggcttc cgccatcgtt
     1501 gcgttgctcg ggcgaaggcg cacgccgcgg cggcggagcc tcgtgctccc acgacggcga
     1561 gcgttccttc ggtgccgcag tttgtgccct gcccttgagc ctctcatacg cggactcacg
     1621 atcgacgacc ttctcgtaga aaccggcgat cggcgacgcc gcgatgattg ctgcccgcgc
     1681 ctcttcgtcg atcggtccga gtcggctccc cggtggaacg atcaacgcgc gctccgtgac
     1741 gcagggccga cctttctcgt ccagcagtga tacgagcgcc tcgccgacgc cgagctcacc
     1801 gatgacctgc tccatcgaga acgcggggtt cggacgcatc gtctcggcgg ccgcccgcac
     1861 cgccttctga tctcgtggcg t
//
LOCUS       DATCUD010000189         1618 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_65962, whole genome shotgun sequence.
ACCESSION   DATCUD010000189 DATCUD010000000
VERSION     DATCUD010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65962"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VIQ99_02685"
     CDS             <1..593
                     /locus_tag="VIQ99_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY9182075.1"
                     /translation="TAAGSIIPSGNLGNGMACVWARAMGLPIRDIVLAVNANRTIPDF
                     LATGQWEPRSSVATLASAMDVGNPSNMERLRNLIPDFAELRMSIEAYPVDDDQIRAQI
                     AKDFARYGKIWCPHTATGFWVYDHLPPARKSGRSWIVSATAHPAKFEGIVEPVIGRAV
                     PIPSTLAALLKRPTECTRLEPQLKSLAAELDAWKVD"
     gene            628..1197
                     /locus_tag="VIQ99_02690"
     CDS             628..1197
                     /locus_tag="VIQ99_02690"
                     /inference="COORDINATES: protein motif:HMM:NF019976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nuclease-related domain-containing protein"
                     /protein_id="HEY9182076.1"
                     /translation="MSQYWIAAAAVIAGLLLIVVGIVLWRRRRGPELVHALDSVAIER
                     LQNVLLPDGMGGQIQVEHLVLTGHGLLVIDAKSFGGTIFAGERMAEWTVIGKNGRFTF
                     PNPLGTLYDRVAALRQLVRDIPVAGYVLFGGTADFSKGRPRDVLSAAELIDRYRRPDK
                     GEIEQLIVAFAPHWDRVKAAIEPVSVESR"
     gene            complement(1194..>1618)
                     /locus_tag="VIQ99_02695"
     CDS             complement(1194..>1618)
                     /locus_tag="VIQ99_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006812343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY9182077.1"
                     /translation="HKPVFLHQRDAHEDFVATLKQIRTRLVGGVAHCFTGGPAELTAY
                     LDLDLYIGVTGWVCDERRGSELRAALPGIPLDRLLVETDAPYLLPRDLAAKPATRRNE
                     PAFLTHIVERVAVGMHKPIEQIAAATTANAERLFGLAR"
BASE COUNT          279 a          503 c          556 g          280 t
ORIGIN      
        1 gcacggccgc gggctcgatc attccgagcg gcaacctggg caacggcatg gcgtgcgtgt
       61 gggcgcgcgc gatgggcttg ccgattcgcg acatcgtgtt ggccgtgaat gcgaaccgca
      121 cgattccgga ctttctggcc acgggccaat gggagccgcg atcgagtgtc gctacgctcg
      181 cgtctgcgat ggacgtcggc aatccgagca acatggagcg cttgcgaaac ctgattccgg
      241 acttcgcaga gctgcgcatg agcatcgaag cctatcccgt cgacgacgac cagattcgcg
      301 cgcagatcgc gaaggatttc gcacgctacg ggaagatctg gtgcccgcat acagcgaccg
      361 gcttttgggt ctacgaccac ctgccgccgg cacgaaagtc gggccgctcg tggatcgtca
      421 gcgcgaccgc gcacccggcg aagttcgagg gcatcgtcga gcccgtgatc ggaagggcgg
      481 tgccgatccc gtcaacgctg gccgcgttgc tgaagcgacc caccgaatgc acgcggctag
      541 agccgcagct gaaatcgttg gcggcagagc tcgacgcatg gaaggtagat tagactaaac
      601 agtgcgttag gtattaaatt ggatgtaatg tctcaatact ggattgcggc tgccgcggtg
      661 atcgcgggcc tgctcttgat cgtcgtcggg atcgtgctgt ggcgtcgccg gcgcggcccc
      721 gagctcgttc acgcgctcga ttccgtcgcg atcgagcggc tccaaaacgt gctgttgccg
      781 gacgggatgg gtggccagat ccaggtcgag catctggtcc tgacgggaca cggcttgctc
      841 gtgatcgacg cgaagtcgtt cgggggcacg atcttcgccg gcgagcgaat ggcagaatgg
      901 accgtgatcg gcaaaaacgg ccggttcacg tttccgaatc cgctcggcac gctctacgac
      961 cgcgtcgcgg cactgcgtca gctcgtgcgc gacatcccgg tagcggggta cgtgctgttc
     1021 ggaggcacgg ctgacttcag caagggccgg ccgcgcgacg tgctctcggc ggccgagctc
     1081 atcgaccgct atcggcggcc cgacaaaggg gagatcgagc aattgatcgt cgcgttcgcg
     1141 ccgcactggg accgcgtcaa ggcggcgatc gagcccgtgt cggtagagtc tcgctagcgc
     1201 gcgagaccaa agagccgctc ggcgttcgcc gtcgtggccg ccgcgatctg ctcgatgggc
     1261 ttgtgcattc ccacggccac gcgctcgacg atgtgcgtca ggaacgcggg ttcgttgcgc
     1321 cgcgtcgccg gcttcgctgc aagatcgcgt ggcaagagat acggcgcgtc cgtttcgacg
     1381 agcagccgat cgagcgggat gcccggcagc gccgcacgca gctcgctgcc gcgacgctcg
     1441 tcgcacaccc agcccgtgac accgatgtag agatcgaggt cgagatacgc cgtgagctcg
     1501 gcgggcccgc ccgtgaagca gtgtgcgacg ccgcccacga gccgggtccg gatctgcttc
     1561 agggtagcga cgaaatcctc gtgcgcatcg cgttggtgca ggaacaccgg cttgtgca
//
LOCUS       DATCUD010000190         2084 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_30408, whole genome shotgun sequence.
ACCESSION   DATCUD010000190 DATCUD010000000
VERSION     DATCUD010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30408"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="VIQ99_02700"
     CDS             <1..644
                     /locus_tag="VIQ99_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018876962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HEY9182078.1"
                     /translation="LLGVKKEDLPSVWRDLNAAGFVSGHAYGKALRTVKTCVGKEWCR
                     FGTQDSTGLGIQMERVTWGSWHPHKVKLAVSGCPRNCAEATIKDLGVVCVESGYELHV
                     GGNGGIKIRPTDFLCKVSTEEEVIEYCCAYLQLYREEARYLERTAPWIERVGLTHVRE
                     RIVDDERGRRALYARFLESQKHSQTDPWAERAKGVQADEFAPLRAVTPAELAS"
     gene            641..973
                     /gene="nirD"
                     /locus_tag="VIQ99_02705"
     CDS             641..973
                     /gene="nirD"
                     /locus_tag="VIQ99_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008332074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008942 - nitrite reductase [NAD(P)H]
                     activity [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HEY9182079.1"
                     /translation="MSWIDVGPLAALPERGARCVRVGDLKVAVFRTSTGEVFALRDQC
                     PHRGGPLSQGIVHGTRVTCPLHDWVIDLTTGRATGADEGATATFSARVVDGRVMLELP
                     AELLARAS"
     gene            970..>2084
                     /locus_tag="VIQ99_02710"
     CDS             970..>2084
                     /locus_tag="VIQ99_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9182080.1"
                     /translation="MTAVRTTCPYCGVGCGLTAARAADGSFAIRADPEHPANVGRMCS
                     KGAALGETLDLDDRLLYPEIRGRRVSWDEALDAVAGGFARAIAEHGPDAVAFYVSGQL
                     LTEDYYVANKLMKGFIGSANIDTNSRLCMASAVAGYKRAFGADTVPNDYTDLEQAELV
                     VLVGTNLAWCHPVLYQRLTAAKAANPQLRVVLIDPRRTQTADIADLVLKLTPGTDVLL
                     FAGLLNHLRREDALDLEFLDSHTEGFGAALRVAKESAASVTAVASACGLAEDDVLEFY
                     RWFARTPRTVTAFSQGVNQSTSGTDKVNAIINAHLATGRIGKAGMGPFSITGQPNAMG
                     GREVGGLANQLAAHMDFAAEHVERVGRFWNTPRVATKP"
BASE COUNT          327 a          686 c          753 g          318 t
ORIGIN      
        1 acctgctcgg cgtgaaaaag gaagatctgc cgagtgtttg gcgagacctg aatgccgcgg
       61 gcttcgtctc agggcacgcg tacggcaaag cgctgcgcac cgtgaagact tgcgtcggca
      121 aggagtggtg ccgcttcggc actcaggact cgacgggcct aggtatccag atggagcgcg
      181 tgacgtgggg gtcgtggcac ccgcacaagg tcaagctcgc cgtgtcggga tgcccgcgca
      241 actgcgccga agcgacgatc aaggatctcg gcgtcgtgtg cgtcgagtcc gggtacgagc
      301 tgcacgtcgg gggcaacggc ggcatcaaga ttcgaccgac ggatttcctg tgcaaggtct
      361 cgaccgagga ggaggtcatc gagtactgct gcgcatatct acagctgtac cgcgaggaag
      421 cgcgctatct cgagcgcacc gcgccgtgga tcgagcgcgt gggcctcacg cacgtacgcg
      481 agcgcatcgt cgacgacgag cgcgggcgca gggcgctgta cgcgcggttc ctcgagtcgc
      541 agaagcattc gcagacggat ccgtgggccg agcgcgcgaa gggcgtgcag gccgacgagt
      601 tcgcgccgct gcgcgcggtc acgccggcgg agctcgcgtc gtgagctgga tcgacgtcgg
      661 gccgctcgcg gcgctgcccg agcgcggggc gcgctgcgtc cgcgtcgggg acctcaaagt
      721 cgcggtgttc cgcacgagca cgggcgaggt gttcgcgctg cgcgatcaat gcccgcatcg
      781 cggcgggccg ttgtcgcagg gcatcgtgca cggcacgcgt gtgacgtgcc cgctccacga
      841 ctgggtcatc gatctgacca cgggccgcgc gaccggcgcc gacgaaggtg cgaccgcgac
      901 gttcagcgcg cgcgtcgtcg acggcagagt catgctcgag ctgccggcgg agctgctcgc
      961 gcgggcttca tgacggccgt tcgcacgacg tgcccgtact gcggtgtcgg ctgcggcctc
     1021 acggcggcgc gtgccgcgga cggcagtttt gcgatccgcg ctgaccccga gcacccggcg
     1081 aatgtcggca ggatgtgctc gaaaggcgcc gcgctcggcg agacgctcga tctcgacgac
     1141 cgcttgctgt acccggagat tcgcgggcgg cgcgtgagtt gggacgaagc gctggacgcg
     1201 gtcgccggcg gctttgcgcg cgcgatcgcc gagcacggcc cggacgccgt cgcgttctac
     1261 gtctcggggc agctgctgac cgaggactac tacgtcgcga acaagctcat gaagggcttc
     1321 atcggcagcg cgaacatcga cacgaactcg cgcctgtgca tggcctctgc ggtcgccggc
     1381 tacaagcgcg cattcggcgc cgatacggtg ccgaacgact acacggacct cgagcaggcc
     1441 gagctcgtcg tgctggtcgg cacgaatctc gcgtggtgcc acccggtgct gtaccagcgc
     1501 ctgaccgcgg cgaaggccgc gaatccgcag ctgcgcgtgg tcctgatcga cccgcgccgc
     1561 acgcagaccg ccgacatcgc ggatctcgtg ctgaagctga ctccgggcac cgacgtgctg
     1621 ctgttcgccg gtctgttgaa ccatctgcgg cgcgaggacg cgctcgacct cgagttcctc
     1681 gattcacata ccgagggctt cggcgccgcg ttgcgcgtcg cgaaggaaag cgccgcgtcg
     1741 gtcacggccg tcgcatccgc gtgcgggctc gccgaggacg acgtcctcga gttctatcgc
     1801 tggttcgcgc gcacgccgcg caccgtgacg gcgttttcgc aaggcgtgaa ccaatcgacg
     1861 agcggcaccg acaaggtcaa cgcgatcatc aacgcgcatc tcgcgacggg ccgcatcggc
     1921 aaggccggca tggggccgtt ctcgatcacg gggcagccga acgcgatggg tgggcgcgag
     1981 gtcggcgggc tcgcgaacca gctggccgcg cacatggact tcgccgcgga gcacgtcgag
     2041 cgcgtcggcc gtttttggaa cacgccgcgc gtcgcgacga agcc
//
LOCUS       DATCUD010000191         1763 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73021, whole genome shotgun sequence.
ACCESSION   DATCUD010000191 DATCUD010000000
VERSION     DATCUD010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1763
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73021"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..311)
                     /locus_tag="VIQ99_02715"
     CDS             complement(<1..311)
                     /locus_tag="VIQ99_02715"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182081.1"
                     /translation="MTTKARSILAIATALAIGFIAGRGGPGDAVAQAGALTAQDYQDI
                     TQLINRYAYGIDTCGNNGYDYANVFTEDGVFIDRNSDAGFAAGGRVLAQGRDALATLV
                     GG"
     gene            complement(337..1002)
                     /locus_tag="VIQ99_02720"
     CDS             complement(337..1002)
                     /locus_tag="VIQ99_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182082.1"
                     /translation="MRRAFKYSLGLVVVLGALCVVLLAATVYTYERLTAETLIAELRF
                     DPAGERQYIATLRTGDRCEERTFPLHGDQWRIDAEFLKWKYWALLLGLDSQYRLDRLE
                     GRYRSAAEQNTQPNVAYDLAERTAVDLVSVAGALGRFNFLLDATYGSSTYQDIDLDNI
                     HYVYRTTTGIITRREPRPVPPEGDAPLSVTIDDACGDASTWQRFAAWTDRQVVDVVDL
                     IDQ"
     gene            1088..1711
                     /locus_tag="VIQ99_02725"
     CDS             1088..1711
                     /locus_tag="VIQ99_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013592079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY9182083.1"
                     /translation="MLTIYGRTNSANVQKVLWCLAEIGVPYRRIDAGLEHGKNNEPWY
                     LALNPNGRVPLLQDGAFSLWESNTIVRYLASKHAYGTLYPASPEDRALAERWMDWQLS
                     TLVRPVSIVFQNLFRTPVEQRDAAAIERNIAEANRAVALLDAHLSAQPYVAGTSFTIG
                     DIPVGAIAHRWLEIPAIERPPLKALREWRARLAERPGFKAHVMLPLS"
BASE COUNT          320 a          596 c          547 g          300 t
ORIGIN      
        1 ccgccgacga gcgtcgccaa cgcgtcgcga ccctgtgcca acacgcgccc gccggccgcg
       61 aaccccgcgt cggagttgcg gtcgatgaac acaccgtcct cggtgaacac gttcgcgtag
      121 tcgtacccgt tgttgccgca cgtatcgatg ccgtacgcgt accgattgat cagctgcgtg
      181 atgtcctgat agtcctgcgc cgtcagcgcc ccggcctgcg caactgcgtc gcccgggccg
      241 ccgcggcccg cgatgaagcc gatcgcaagc gcggttgcga tcgcaagaat ggatcgtgcc
      301 ttcgttgtca tcgattcctg acctccacga gattggctat tgatcgatca gatccaccac
      361 gtcgacgacc tgccggtccg tccaggccgc gaagcgctgc cacgtcgacg cgtcgccgca
      421 agcgtcgtcg atcgtgaccg acagcggcgc gtccccttcg ggcggcacgg gccgcggctc
      481 gcggcgcgtg atgattccgg tcgtcgtgcg atagacgtag tggatattgt cgaggtcgat
      541 gtcctggtac gtcgagctgc cgtaggtcgc atcgagcagg aagttgaacc gaccgagcgc
      601 gcccgcgacg gacaccaggt cgaccgccgt gcgctcggcc agatcgtaag cgacgttggg
      661 ctgcgtgttc tgctccgccg cggatcgata ccggccttcc aagcggtcga gccggtactg
      721 ggaatcgagg ccgagcaaca gcgcccaata cttccacttc aggaattccg catcgatgcg
      781 ccactggtcg ccatggagcg gaaacgtgcg ctcctcgcaa cggtcgccgg ttctcaaggt
      841 cgcgatgtac tggcgttcgc cggcaggatc gaaccgcagc tccgcaatca gagtctcggc
      901 ggtcaagcgc tcgtaggtat agaccgtggc cgcgagcaac acgacgcaca acgctccgag
      961 aacgaccacg agaccgagcg aatatttgaa cgctctgcgc atataagccc catgtcagcg
     1021 agcgcgcgtg tcatgcgaga ataacatgcc cgccggcgca ccattcgcgc ctgagcgagg
     1081 cgtagcgatg ctcacgatct acggccgcac gaattccgcg aatgtccaga aagtgctctg
     1141 gtgcctcgcc gagatcggag tgccgtatcg ccgcatcgac gccgggctcg agcacggcaa
     1201 gaacaacgag ccttggtatc tcgcgctgaa tccgaacggc cgcgtgccgc tgctgcaaga
     1261 cggcgcgttc agcctgtggg aatcgaacac gatcgtgcgc tatctcgcga gcaaacacgc
     1321 gtacggcacg ttgtaccccg cgtcgcccga agaccgcgca ctcgcggaac gctggatgga
     1381 ctggcagctc tcgacgctgg tccgccccgt ttcgatcgta tttcaaaacc tgtttcgcac
     1441 gccggtcgag cagcgcgacg cggcggcgat cgagcgcaac atcgcggagg caaaccgcgc
     1501 cgttgcgcta ctcgacgctc atctctcggc acagccgtac gtcgcaggca cgagcttcac
     1561 gatcggcgat atcccggtcg gcgccatcgc gcaccgctgg ctcgagatcc ccgcgatcga
     1621 gcgtccgccc ctcaaggccc tgcgcgagtg gcgcgcccgg ctcgccgagc gaccggggtt
     1681 caaggcgcac gtaatgctac cgctctcctg aagtctttga cgtaacccaa gaggttgcgg
     1741 tacctttccg gtgtaagccg ata
//
LOCUS       DATCUD010000192         2493 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73027, whole genome shotgun sequence.
ACCESSION   DATCUD010000192 DATCUD010000000
VERSION     DATCUD010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2493)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2493)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2493
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73027"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..106)
                     /locus_tag="VIQ99_02730"
     CDS             complement(<1..106)
                     /locus_tag="VIQ99_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017987920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9182084.1"
                     /translation="MTTFVLVHGAWHGSWCWKRVRSALQAQGHEVFTPT"
     gene            269..970
                     /locus_tag="VIQ99_02735"
     CDS             269..970
                     /locus_tag="VIQ99_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9182085.1"
                     /translation="MQESMPTVLVPGLLCTPRLYREQLEALWHFGPVTVADHTRDDSM
                     AGIARRILSQAPPRFALVGLSMGGYVSFEILRQAPERVVKLALLNTNARPDLSEQIEA
                     RKNQIVMAQSGRFDEIAGLLFPRFVAASRHGDRALEAIVRTMAAETGSAAFVRQQSAI
                     MHRVDSRPGLGAIRCPTLIVGGEHDALMPPDRATEMAAGIPSARQLVVPDCGHLSTLE
                     QPQALTRALTEFLGE"
     gene            complement(977..2203)
                     /locus_tag="VIQ99_02740"
     CDS             complement(977..2203)
                     /locus_tag="VIQ99_02740"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010628211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9182086.1"
                     /translation="MERITTVVIGAGHAGLATSRLLTERSIDHVVLERGEVANSWRRE
                     RWDSLRLLTPNFQSRLPGYRYEGANPNGFMTVPEVVEFIAGFAAASAAPVRTQTEVTA
                     LRRVDSGYRVTTTRGELHARSVVIASGACNVPVVPAVRAAVPSSIEQLTPLDYGNPGR
                     LPEGGVLVVGAAATGVQLADEIRRSGRHVILAVGEHVRLPRTYRGRDVLWWMERSGVW
                     DERYDAIDDIVRARRLPSPQLVGTPERTTLDLNTLRAAGVEIVGRIAAVRDGRALFSG
                     GLVNQFALADLKMNRLLERFDEWAAATGEPDVGPAERFEPTVAPAAPRNGLDLASGEV
                     RSIVWATGFRPDYRWLDVPVLDRKGLLRHDGGVVDESPGLYAMGLPVLRRRKSTFIHG
                     AEDDARDIVAHLAQSL"
     gene            complement(2226..>2493)
                     /locus_tag="VIQ99_02745"
     CDS             complement(2226..>2493)
                     /locus_tag="VIQ99_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006201396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY9182087.1"
                     /translation="AAVAQNRGIQLRSVEAKLEGSMDIQGILGIDSDVRNGYDDIKVT
                     FDIDADASQKDIEALVAQSQKRSAVFDIITNPTNVTVEVHKKKG"
BASE COUNT          384 a          864 c          840 g          405 t
ORIGIN      
        1 gcgtcggcgt gaagacttcg tggccttggg cctgcagcgc gctacgcacg cgcttccaac
       61 accagctgcc gtgccacgca ccatgtacga gaacgaacgt cgtcatgttt cacccttgtc
      121 gtgaccgtcg ccgatcatac ggccgatcgg ccgcgccctc acgtgcggcg tagtgagaga
      181 tcactttaag ttcgttcagc ttcgccgaga gggctcgggc ggcgtgctat ggtgcccgga
      241 aacgctgcgc tgaacacgaa ggaagctcat gcaggaatcg atgccgactg ttctggtgcc
      301 ggggttgctg tgcacgcccc ggctctaccg cgagcagctc gaggctctgt ggcacttcgg
      361 gccggtcacg gtcgcggacc acacgcgcga cgacagcatg gccggcatcg cgcgccgaat
      421 tctgtcgcag gcgccgccgc gtttcgcgtt ggtcggactg tcgatgggcg gctacgtttc
      481 gttcgagatc ctgcgtcaag cgcccgagcg cgtcgtgaag ctcgcactgc tgaacacgaa
      541 tgcgcgcccg gacctgtcgg agcagatcga ggcgcgcaag aaccagatcg tcatggcgca
      601 gagcggacgc ttcgacgaga tcgcggggct gctgtttccg cgcttcgttg cggcctcgag
      661 gcacggcgac cgcgcgctcg aagcgatcgt ccgcacgatg gccgcggaga ccggatctgc
      721 cgcgttcgtg cggcagcaga gcgcgatcat gcaccgcgtc gactcgcgcc caggcctcgg
      781 cgcgattcgc tgcccaacgc tgatcgtcgg cggtgagcac gacgcgctga tgccgccgga
      841 ccgagcgacc gagatggccg cgggcatccc gagtgcacgg cagctcgtcg tcccggactg
      901 tggccatctt tcgaccctcg agcagcccca ggcgttgact cgcgcgctca cggagttcct
      961 cggcgaatag ggcgcgtcac agcgactgcg cgaggtgcgc gacgatgtcg cgtgcgtcgt
     1021 cctccgcgcc gtggatgaac gtcgacttgc ggcgccggag cacgggcaac cccatcgcgt
     1081 agagccctgg cgactcgtcg acgacgccgc cgtcgtgccg tagcaatccc ttgcggtcca
     1141 gcaccgggac gtcgagccag cggtaatcgg gccgaaaccc cgtggcccag acgatcgagc
     1201 gaacctcgcc gctcgcgaga tcgagcccgt tgcgcggcgc tgccggcgcg accgtcggct
     1261 cgaaacgctc cgccgggccg acgtcgggct cgcccgtcgc tgccgcccat tcgtcgaaac
     1321 gctccagcag cctgttcatc ttgaggtcgg cgagcgcgaa ttggttcacg agcccgcccg
     1381 agaacagcgc gcgtccgtcg cgcacggccg cgatccggcc gacgatctcg acgcccgcgg
     1441 cgcgcagcgt gttcagatcc agcgtcgtgc gctccggcgt gccgacgagt tgcggcgacg
     1501 gcaaccgacg cgcgcgaacg atgtcgtcga tcgcgtcgta acgctcgtcc catacgccgg
     1561 agcgctccat ccaccaaagc acgtcgcggc ctcgataggt gcgcggcagg cgcacgtgct
     1621 caccgacggc gaggatcacg tggcggcccg agcggcggat ctcgtcggcg agctgcacgc
     1681 cggtcgcggc cgcgccgact acgagcacgc cgccttcggg taagcgcccc gggttgccgt
     1741 agtcgagcgg cgtcaactgc tcgatcgagc tcggcacggc ggcgcgcacg gccggcacga
     1801 cgggcacgtt gcaggcgccg ctcgcgatca cgacgctgcg cgcgtgcagc tcgccgcgcg
     1861 tcgtggtgac acggtaaccc gagtcgacgc ggcgcagcgc cgtgacttcg gtctgcgttc
     1921 gaaccggcgc ggccgacgcg gccgcgaagc cagcgatgaa ctcgacgacc tcgggaacgg
     1981 tcatgaagcc gttcgggttc gcgccctcgt atcgataacc cggtagccga ctctggaaat
     2041 tcggcgtcaa caaccgcagc gaatcccagc gctcgcgacg ccaagagttc gcaacctcgc
     2101 cgcgctcgag caccacgtgg tcgatcgaac gctcggtcag caggcggctc gtcgcgagtc
     2161 ccgcgtggcc ggcaccgatg acgaccgtcg tgattcgttc gatgggacgc cccgcgtcgg
     2221 cgcggctagc ctttcttctt gtgaacctcg accgtcacgt tcgtcgggtt cgtgatgatg
     2281 tcgaacacgg ccgagcgctt ctgcgactgc gcgacgagcg cctcgatgtc cttctgggat
     2341 gcgtcggcgt cgatatcgaa cgtcaccttg atgtcgtcgt agccgttgcg gacgtcgctg
     2401 tcgatgccga ggatgccctg gatgtccatg gacccttcga gcttcgcttc caccgatcgg
     2461 agctgaatgc cccgattctg tgcgaccgcg gcg
//
LOCUS       DATCUD010000193         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_80162, whole genome shotgun sequence.
ACCESSION   DATCUD010000193 DATCUD010000000
VERSION     DATCUD010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80162"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..428
                     /locus_tag="VIQ99_02750"
     CDS             <1..428
                     /locus_tag="VIQ99_02750"
                     /inference="COORDINATES: protein motif:HMM:NF024919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEY9182088.1"
                     /translation="AKVKRWARLQAATLGYDEFLRLGGQLKLRDLEPSLLRKFLKRGI
                     PVITGLSATYLYRAVRDIPETNADDDIRGEPVGHFVVLTGYRRDTREILIADPLETNP
                     LVDSRYYAVRVQRLIGAVLLGIMTYDANLLVIEPKGSVQ"
     gene            425..1945
                     /locus_tag="VIQ99_02755"
     CDS             425..1945
                     /locus_tag="VIQ99_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family protein"
                     /protein_id="HEY9182089.1"
                     /translation="MTALIVVDHPEEWPLQFAAAEVISADTYLRDETLAARRNVRVYN
                     LCDSYEYQTAGYYVSLLAVARGHRAMPGVGTIQDVKSRSLLRADDELEEIVERSLHTI
                     KSKRFELSVYFGCNVADRHAALSRALFNLFPVPLMRATFAQSSTTKRWRLRSITPIPV
                     GDIPPSHGPFLRQVIENHFARRGPAGRAGRSAQYEHDLAILVNDEERSPPSNREALKR
                     FERAARHNGFDVEFLNRDDYGRIAEFDALFIRETTAVNHHTYRFASRARAEGLVVIDD
                     PESIIRCGNKVYLVELARRLGLAIPPTMVVDSSTGVDRVVRELGLPCVLKQPDSAFSE
                     GVFRADTRAQLATGLQRLLSRSDLVVVQSFMPTEFDWRVGVFDGQPLFVCRYFMAEGH
                     WQIYHHRAKGNGEKRTKEGETETIAVQHAPHDVLELALKTANAIGDGFYGVDIKTVEG
                     RQVLMEINDNPNVDRGVEDAILGDALYDRIMKVLRARVDAGKQFRPAAEGRGDGSP"
BASE COUNT          343 a          630 c          644 g          343 t
ORIGIN      
        1 aggccaaggt caagcggtgg gcgaggctgc aagcggccac gctgggctac gacgagttcc
       61 tgcgtttggg cgggcagctc aagctgcgcg atctcgagcc gtcgctgctg cgcaagttct
      121 tgaaacgcgg catcccggtc atcactggcc tttctgcgac gtacctttat cgcgccgtgc
      181 gcgacatccc cgagacgaac gccgacgacg acattcgcgg cgagccggtc gggcacttcg
      241 tcgtcttgac cgggtatcgc cgcgatacgc gcgagatcct gattgccgat ccgctcgaga
      301 ccaacccgct cgtcgactcg cgctactatg ccgtgcgcgt gcagcgcctg atcggggcgg
      361 ttctgctcgg cattatgacg tacgacgcga acctgctcgt gatcgagccg aaaggctccg
      421 tccagtgacg gcgctgatcg tcgtcgatca tcccgaggaa tggccgctcc agttcgcggc
      481 ggccgaggtc atcagcgccg acacgtatct gcgcgacgag actctcgccg cgcgacgcaa
      541 tgtacgcgtc tacaacctct gtgattcgta cgagtatcag acggccggtt actacgtgtc
      601 gctgttggcc gtcgcgcgtg gccaccgcgc catgccgggc gtcggcacga ttcaggatgt
      661 gaagtcacgt tcgttgctgc gtgccgacga tgagctcgaa gagatcgtgg agcggtccct
      721 gcacacgatc aaatcgaagc gcttcgagct cagcgtctac ttcggttgca acgtggcgga
      781 tcgacacgct gcgctgagcc gcgcgttgtt caacctgttc ccggtgccgc tgatgcgcgc
      841 gacgttcgcg cagtcatcga cgaccaagcg gtggcgcctc cgcagcatca cgccgatccc
      901 ggtcggcgac attccgccga gccacggccc attcctccgg caggtcatcg aaaaccactt
      961 cgcacgccgc gggcccgcgg gccgcgcggg acgcagcgcc cagtacgagc acgacctcgc
     1021 gattttggtc aacgacgagg agcgctcgcc gccgtcgaat cgcgaggcgc tgaagcgctt
     1081 cgagcgtgcc gcgcgccaca acggcttcga cgtcgagttc ctgaaccggg acgattacgg
     1141 ccgaatcgcc gagttcgacg cgttattcat ccgcgagacg acggccgtga accatcacac
     1201 gtatcggttc gcgagccgcg cacgggccga gggactcgtc gtgatcgacg atcccgaatc
     1261 gatcatccgc tgcggaaaca aggtatacct cgtcgagctc gcaaggcggc tcggtctcgc
     1321 gattccgccg acgatggtcg tcgatagcag caccggcgtc gaccgtgtcg tgcgggagct
     1381 cggtctgccg tgtgtgctga aacagccgga tagcgcgttc tccgaaggcg tgttccgcgc
     1441 cgatacgcgc gcgcagctcg ccacgggttt gcagcggttg ttgtcgcgca gtgacctcgt
     1501 cgtcgtgcag tccttcatgc cgacggagtt cgattggcgg gtcggtgtgt tcgacggcca
     1561 gcctctgttc gtgtgccgct acttcatggc cgaggggcac tggcagatct accatcaccg
     1621 cgcgaagggc aacggcgaga agcgcacgaa ggaaggcgag accgagacga tcgcggtgca
     1681 gcacgcgccg cacgacgtgc tcgagctagc ccttaagacc gcgaatgcga tcggcgacgg
     1741 tttctacggc gtcgacatca agaccgtcga aggccggcag gtgctgatgg agatcaacga
     1801 caacccgaac gtcgaccgcg gcgtcgagga tgcgattctc ggcgacgcgc tctacgatcg
     1861 gatcatgaag gtgctgcgag cgcgcgtcga cgccggcaag caattcaggc ccgccgctga
     1921 agggcgtggg gatgggtcgc cgtaagccgg tcgtgaaacg
//
LOCUS       DATCUD010000194         1971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66028, whole genome shotgun sequence.
ACCESSION   DATCUD010000194 DATCUD010000000
VERSION     DATCUD010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66028"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(404..1162)
                     /locus_tag="VIQ99_02760"
     CDS             complement(404..1162)
                     /locus_tag="VIQ99_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020680862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY9182090.1"
                     /translation="MPGPFVHAPHGRLIVVEGSHNPLANQLLASLPAAVLGGLAPRLE
                     LVSMPLGAVLYESGSQMSHVYFPTTSIVSLLYVMENGSSAEIAVVGHEGIVGIALFMG
                     GETTPSRGIVQSAGHAYRLKGQELKQEFTRAAELQHVLLRYTQALLTQMAQTAVCNRH
                     HSVDQQLCRWLLLSFDRLSGNELIMTQELIANMLGVRREGVTEAAGKLQKAGLIRYNR
                     GHITVLDRPGLEARSCECYAVVKKEFDRLLPRER"
     gene            1319..>1971
                     /locus_tag="VIQ99_02765"
     CDS             1319..>1971
                     /locus_tag="VIQ99_02765"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9182091.1"
                     /translation="MYRDNLLRRIVPIGIAAALMSCHSGSDDPQPQPTPTPGSGLDQR
                     PNNLACVAPARVAGNSTLSVQRAFPALTFLEPVAMLQAPGDSSRWFVVEQNGIVRVFA
                     NQQNVQTSQVFVDISGRVYQNSQTEAGMLGLAFHPSFPAVNRAYVNYTAPGPGPLRST
                     TSEFTSPDNGLTLNPNSERVLLSVNKDFDNHNGGQLAFSPVDGFLYVGLGDGGGGNDP
                     "
BASE COUNT          388 a          620 c          615 g          348 t
ORIGIN      
        1 ccgtgcgggt attgcgtgcc tgcaagtagt cgaacgcgag gtggcgatgc acgaaatcgc
       61 agacgtgttg cacgcgcgcc cagccgggag gcgtgctccc gaacagttgc caggcgagga
      121 cgatcatctc gtcgacctcg cagtaacggg ctcgcgatca gaggctcgag gacgtcgtcg
      181 ggcatctcga tcaacaaaca ttcgtcgcgc cgaatggcga accgacaagt cggatgcaga
      241 tacaacattg caatgatcgg cgtcggtacg gggtgttcga agacgatgtc gtaaccgatg
      301 cggatcaaca tgtccgaacg ccgtggtggg tccacgattc caccacattc gagggccatg
      361 gctctgtgcg ccaccgtaca tagtgggcgc gagtgtctcc gcctcagcgc tcccgcggta
      421 acaaccggtc gaattccttt ttgacgacgg catagcattc gcaggagcgt gcttcgaggc
      481 cgggcctgtc gagcacggtg atgtggccgc ggttgtagcg gatcaacccg gccttttgca
      541 gcttaccagc tgcctccgtc acaccctcgc gacgcacgcc gagcatgttg gcgatcagct
      601 cttgcgtcat gatcagctcg ttaccggaca accggtcgaa gctcagcagt agccagcggc
      661 agagctgctg atcgaccgag tggtgccgat tgcagacggc cgtctgcgcc atttgcgtca
      721 acagggcttg tgtatatcgg agcaagacgt gctgcagttc cgcggcacgc gtgaactcct
      781 gcttcagctc ctgtcccttc aggcgatacg catgcccggc gctttgaacg atgccgcgac
      841 tcggcgtggt ctcgccgccc atgaacaacg cgataccgac gatgccctcg tgaccgacga
      901 cggcgatttc tgccgatgag ccgttctcca tcacatataa caacgagacg atcgaggtcg
      961 tcggaaaata gacgtgactc atctggctgc ccgattcgta caagacggcg ccgagcggca
     1021 tcgatacgag ctccagacgc ggcgctagac cgccgagcac ggcggccggc aacgatgcga
     1081 gcagttgatt agcgagcggg ttgtgcgagc cctcgaccac gatcaagcgc ccgtgcggcg
     1141 cgtgcacaaa tggccccggc attgtccgtc gttcataacg agcagtgtag tcggttacca
     1201 ctgtctgcgg atgacgacag tccgacgcgg atgaaagatc gatctcgcgg gtagaatgtc
     1261 cgcgaagtgt gccgtgaacc aagtgtgcgg ccagcgcgag acgccaggga gatcagggat
     1321 gtatagagac aatctgcttc gccgaatcgt gccgatcggt atagcagccg cgctgatgtc
     1381 gtgtcacagc ggatccgacg atccgcagcc acaaccgaca ccgacgccgg gctcgggcct
     1441 cgatcaacgc ccgaataatc tcgcctgcgt tgcgccggcg cgcgtcgcgg gcaactcgac
     1501 gttgtccgtg cagcgcgcgt tcccggcgct gaccttcctc gagcccgtcg cgatgctgca
     1561 ggcgcccggc gacagctcgc gctggttcgt cgtcgagcag aacggcatcg tgcgagtgtt
     1621 cgcaaatcag cagaacgtgc agacgagcca ggtcttcgtc gacatcagcg ggcgcgtgta
     1681 ccaaaacagc caaaccgaag ccggcatgct cgggctcgcg ttccatccga gcttcccggc
     1741 cgtgaaccgc gcctacgtaa actacacggc gccggggccc ggcccgttgc gctcgacgac
     1801 gtcggaattc acgagccccg ataacggcct gacgctgaat ccgaactccg agcgggtcct
     1861 gctctcggtc aacaaggact tcgacaacca caacggtggg caactcgcgt tcagcccggt
     1921 cgatggattc ctgtatgtgg gcctcggcga cggcggcggc ggcaacgacc c
//
LOCUS       DATCUD010000195         4107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58721, whole genome shotgun sequence.
ACCESSION   DATCUD010000195 DATCUD010000000
VERSION     DATCUD010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58721"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..453)
                     /locus_tag="VIQ99_02770"
     CDS             complement(<1..453)
                     /locus_tag="VIQ99_02770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182092.1"
                     /translation="MLFQRRFHERIRSGELRCTVRIWQRPHARVGGRYALGAGAIVVD
                     KIHETRLDDITPTLAKRCGFPSLVDLLKTAKHGAGERVFVIDFHYDGKTGARPNPETG
                     VVSTAELAELVPRLEAMDRRSKTGAWTLTTLRAIEARPGVLAAKLARSL"
     gene            complement(480..821)
                     /locus_tag="VIQ99_02775"
     CDS             complement(480..821)
                     /locus_tag="VIQ99_02775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182093.1"
                     /translation="MSAQHAAEPAQGETITLDAQGGDYPEWFQNPHMVEFYALSVEML
                     RAARRVDAAAYEQRSYAIFRAFAESLGANPDGMIDHLKAIPREMVGIVKDDPKVLDSY
                     ENFLVALRGPR"
     gene            1040..1465
                     /locus_tag="VIQ99_02780"
     CDS             1040..1465
                     /locus_tag="VIQ99_02780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182094.1"
                     /translation="MSFREKSAWITLITLVLLLAFYLTHLPPPWWLRAETGGFLFHVL
                     TLGVIAFVVIELIAHAIVALRAPRDARAPRDEREHLIALKARSIAGRVYAILSLGSVF
                     LVIHLGANDGGILYCLFLSFVVSQIVNYAARVVYYRRGV"
     gene            1467..1706
                     /locus_tag="VIQ99_02785"
     CDS             1467..1706
                     /locus_tag="VIQ99_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020546662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY9182095.1"
                     /translation="MSTGVTNTIRKLRFERNEMTQQDLAERVGVTRQTINAIELGKYS
                     PSLEVAFRIAAALGVRIEEVFSYDGAAAQSQESTR"
     gene            1703..3109
                     /locus_tag="VIQ99_02790"
     CDS             1703..3109
                     /locus_tag="VIQ99_02790"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HEY9182096.1"
                     /translation="MNRRLLIKGAVGAGLVAGAGALGRYALLAPSPTGRRASMDELVA
                     ELLAALSPSAKAQACFSYDHPLRQYHNRGLWLGGLSVNAVTLDWDTRRLLTDVMHAGL
                     SEAGRNRVPLQDSTSFFGVNMLQLAICGDPSTGPYQLVLSGVHLNLRLGSASPEGTAF
                     GGPQVYGDQRGNGRVGLPSNTYRYQLEAAQRLVAALTPAERAQARVARAPAQVNIGVQ
                     GAAGRFDGVAIADLAPAKRALAREVVAGILGTYADESAAYAWQCLDRNGGIDGLHFAD
                     YDEDFEGGRLAGDGPSQIFRIEGPAAVFHFRGEPHLHAFINVTMDGEKPLGVGEALGH
                     NPTVLEGESLRALFETAMRTQAQADVGYYPLPGVVGRLRAGEVRAGDLWVAESWVNEL
                     VVVEVQGNDVAPELAAVMRSRGVVPQAHTRYRIATTDYSARDESFRLGRVGPARTLGP
                     LREALVAHVRSHGFGREV"
     gene            3117..3482
                     /locus_tag="VIQ99_02795"
     CDS             3117..3482
                     /locus_tag="VIQ99_02795"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9182097.1"
                     /translation="MNRLIPMLPVRSVAASVEFYRKLGFEIEQRNDKWGWAMLRFDEC
                     RLMVDQSINVQPRAPRLSVIYLYPEDIVEYHRQLRSNGLDIPDLDVTFYGMTEFRVDD
                     PDGNRLWIGQNTAARPESP"
     gene            3479..4057
                     /locus_tag="VIQ99_02800"
     CDS             3479..4057
                     /locus_tag="VIQ99_02800"
                     /inference="COORDINATES: protein motif:HMM:NF019614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEY9182098.1"
                     /translation="MTVYVSMLRAVNVGGTSVLKMDTLRAIYESMGLKDVRTLLASGN
                     VVFRSGLKDRGKLVKRIVQEIERKVGLHVEVILRTLAEIADIVERGPVLSPRADMAKL
                     HVMFLAGVPEAAAQAALGKWHKAAKLPEMLEMRGPEIYLYYPEGVGRSKLTNAVIEAK
                     LGTAGTARNWNTVTKLLEVGRVLESAARGTED"
BASE COUNT          718 a         1265 c         1382 g          742 t
ORIGIN      
        1 aagcgagcgc gcgagcttcg ccgctagcac gccgggacgt gcctcgatcg cgcgcaacgt
       61 ggtcagcgtc catgcgccgg ttttcgagcg ccggtccatc gcctcgaggc gtggcacgag
      121 ctctgcaagt tccgcggtgg agaccacgcc ggtctcggga ttcgggcgcg cgccggtctt
      181 tccgtcatag tggaagtcga tcacgaacac tcgctcgccc gcgccgtgct tcgccgtctt
      241 cagcagatcc acgagagacg ggaagccgca gcgtttcgcc aacgtaggcg taatgtcgtc
      301 caggcgcgtc tcatggatct tgtcgacgac gattgctccg gcgccgagcg catatcggcc
      361 gccgactctc gcgtgcgggc gctgccaaat tcgcaccgtg cagcggagct cgccgctgcg
      421 gatccgctcg tgaaaccgcc gctgaaaaag cacgaaccat tacaacacga caccgggcgt
      481 tagcgtgggc cacgcagcgc gacgaggaag ttctcgtaac tatcgagcac cttcggatcg
      541 tctttgacga tcccaaccat ctcgcgcggg atcgccttca ggtgatcgat catgccgtcg
      601 gggttggctc cgagcgactc cgcgaacgcg cggaagatcg cgtaggaccg ctgttcgtag
      661 gcggccgcgt cgacgcgacg tgcggcgcgc agcatttcga cgctgagcgc gtagaactcg
      721 accatgtgcg ggttctgaaa ccactcgggg tagtcgccgc cttgggcgtc gagcgtgatc
      781 gtctcgccct gggccggctc ggccgcgtgc tgcgcggaca cggcacaatg ggataaggac
      841 gcgagcgtcg cgaaggctag cagtgttttc ttgaagggca tcgttattct ccagttgggt
      901 taccgagggc tggtcggcac ggtgggcacc agcggctgaa atgtaaaata tacaggacac
      961 aatgtaaata tatatttact caacgacaga aaaaacgtac attgcgtcgc aataaccaga
     1021 cgtctccgga gccccgccaa tgtcgttccg cgaaaaaagc gcatggatca ctctgatcac
     1081 cctggttctg ctgctggcgt tctatctgac gcacctgccg ccgccgtggt ggttgcgggc
     1141 agaaacgggc ggattcctgt ttcacgtcct gacgctcggc gtcatcgcgt tcgtggtgat
     1201 cgagctgatc gcccatgcga tcgtggccct gcgcgcgccg cgcgacgcgc gcgctccgcg
     1261 cgacgagcgc gagcacctga tcgcgctgaa ggcgaggagc atcgccgggc gcgtgtatgc
     1321 gatcttaagc ctgggatcgg tgttcctggt catccacctc ggcgctaacg atggcggaat
     1381 cctttattgt ctcttcctgt cgttcgtcgt ttctcagatc gtgaattacg cggcacgcgt
     1441 cgtgtactac cggcggggag tctgacgtga gcaccggcgt cacgaacacg attcgcaagc
     1501 tgcgtttcga gcgcaacgag atgacacagc aggatctcgc cgagcgcgtc ggcgtcacgc
     1561 gccagacgat caacgcgatc gagctcggca agtactcgcc gtcgctcgag gtcgcgtttc
     1621 ggatcgccgc tgcactcggc gttcggatcg aagaagtgtt ctcgtacgac ggagccgcag
     1681 ctcaatcgca ggagtcgacg cgatgaaccg acgcctgttg atcaagggcg cagtcggtgc
     1741 cggtctcgtg gccggcgccg gcgcgctggg gcgttatgcg ttgctcgcac cttcgccgac
     1801 cgggcggcgc gcgagcatgg acgagctggt tgccgagctc ctggcggctc tgtccccatc
     1861 ggccaaggcg caagcttgtt tctcgtacga ccatccactc cggcagtatc acaaccgcgg
     1921 gctctggctc ggcgggctca gcgtcaacgc cgtgacgctc gattgggaca cgcggcgcct
     1981 gctcaccgat gtgatgcatg ccgggttgtc cgaggccggc cggaatcgtg ttccgctcca
     2041 ggactcgacg agcttcttcg gcgtgaacat gttgcagctc gcaatctgcg gcgatccgag
     2101 cacggggccc tatcagctcg tgttatcggg cgtgcacctg aatctgcgct tgggtagcgc
     2161 gagccccgag ggcaccgcgt tcggcggccc gcaggtgtat ggcgaccaac gcggcaacgg
     2221 acgagtcggg ctaccgagca acacctatcg ttaccagctc gaagccgcgc aacggctcgt
     2281 ggccgcgttg acgccggccg agcgcgccca ggcgcgagtc gcgcgtgcgc ccgcgcaggt
     2341 caacatcggc gtgcaaggag cggccggtcg tttcgatggc gtggcgatcg ccgacctcgc
     2401 gccggccaag cgcgcgctcg cgcgcgaggt cgtcgcgggc attctaggca cctacgcgga
     2461 cgagtctgct gcatatgcgt ggcagtgtct cgatcgtaac ggcggcatcg acggactgca
     2521 ttttgccgac tacgacgagg acttcgaagg cggccggctc gcgggcgacg gcccgtcgca
     2581 aatcttccgc atcgaagggc ccgcagccgt gttccacttc cgcggcgagc cgcacttgca
     2641 tgcgttcatc aacgtgacga tggacggcga gaagccgctc ggcgtcggcg aggcgctcgg
     2701 ccacaacccg accgtgctcg aaggcgagtc gttgcgtgcg ctgttcgaga ccgcgatgcg
     2761 aacgcaggcg caggccgatg tcggctatta cccgttgccg ggcgtcgtcg ggcgtttgcg
     2821 agcaggtgag gttcgtgccg gcgacttgtg ggtcgccgag agctgggtca acgagctcgt
     2881 cgttgtcgaa gtgcagggca acgacgtcgc gccggagctc gcggcagtga tgcggtcgcg
     2941 tggagtggtt ccgcaggcgc acacgcgcta ccgcattgcg actaccgact attcggcacg
     3001 cgacgagtcg ttccgactgg gtcgcgtcgg tccggcccgc acgctggggc cgttgcggga
     3061 ggcgctcgtc gcgcacgtgc gctcgcacgg gttcggacgc gaggtctagc gtgaagatga
     3121 atcgcctgat cccaatgctg cccgtgcgca gcgtcgcggc gagtgtcgag ttctatcgca
     3181 agctcggatt cgaaatcgag cagagaaacg acaaatgggg ctgggccatg ctgcgcttcg
     3241 acgagtgtcg gctcatggtg gatcaatcga tcaacgtgca gccgcgcgca ccgcgcctgt
     3301 cggtgatcta tttgtatccg gaagacatcg tcgagtatca ccgtcagctg cgcagcaacg
     3361 ggctcgatat ccccgatttg gacgtcacgt tctacggcat gacggagttt cgcgtcgacg
     3421 atcccgacgg caaccggttg tggatagggc agaataccgc cgcgagaccg gagagcccat
     3481 gaccgtatac gtgtcgatgc tgagggccgt gaatgtcggc ggcaccagcg tgctgaagat
     3541 ggacacgctg cgcgcgatct acgaatccat ggggctcaag gacgtgcgca cgttgctcgc
     3601 gagcggtaac gtcgtctttc gcagcgggct caaagatcgc gggaagctcg tcaagcggat
     3661 cgtgcaagag atcgagcgga aggtcggttt gcacgtagag gtaattctgc ggacgctcgc
     3721 cgagattgcg gatatcgtcg agcgcggtcc ggtgctctct ccgcgcgcgg acatggcgaa
     3781 gctgcacgtg atgtttctcg cgggcgtgcc cgaggccgcc gcacaagcgg ctctcggcaa
     3841 gtggcacaaa gcggcgaaat tgcccgagat gctcgagatg cgcggccccg agatctatct
     3901 ctattatccg gagggagtag gccgctcgaa gctgacgaac gccgtgatcg aggccaagct
     3961 cgggacggcg ggcaccgcgc gaaattggaa caccgtcacg aagctgctcg aagtcgggcg
     4021 agtgctcgag agtgcagcgc gcggtacgga agactgacgt cgcctaagcg caggcgttca
     4081 caaccggtcg agcagcttgc cggtcag
//
LOCUS       DATCUD010000196         2689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94404, whole genome shotgun sequence.
ACCESSION   DATCUD010000196 DATCUD010000000
VERSION     DATCUD010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94404"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..610
                     /locus_tag="VIQ99_02805"
     CDS             <1..610
                     /locus_tag="VIQ99_02805"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF015656.4"
                     /note="biodegradative; catalyzes the formation of agmatine
                     from arginine; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HEY9182099.1"
                     /translation="IPADIVTAYLGRHGIVPSRTTDHMVLFLFSMGVTKGKWGTLLNT
                     LLDFKVDYDRNAPLDEVLPNVAAAAPDRYAGLGLKDLGDEMWAHLRKSRQGHWQAQAY
                     ASLPKPVMTPRRAFQMLMANDAEKVPLAKMANRVAAVGVIPYPPGIPIVMPGENVGPA
                     DGPWITYLRTLQEYGHRFPGFAKEVEGTEERDGTYYIYCVKK"
     gene            630..>2689
                     /gene="speC"
                     /locus_tag="VIQ99_02810"
     CDS             630..>2689
                     /gene="speC"
                     /locus_tag="VIQ99_02810"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007738381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
                     /protein_id="HEY9182100.1"
                     /translation="MMQFAAKAPTIPIPFQRLLKVVAVVDGEDGQVRALLERIKAEGY
                     EVEVADRYDRDVSEDAEVGAYIVSVDGKRLKPARKMAQAVRRIGFKTPLWALADSHEI
                     ADVEAVAGVGEVDGYIYLGQQTPTFYAKQVVASVVEYGMSLLPPFFGGLMAYDAEANV
                     SFACPGHQGGEFYRKSPPGQLFFKHFGEQIFRNDLCNADVDLGDLLIHVGAAVDAQRH
                     AAAVFGADRTYFVLNGTSSSNKVVTQAMLKRGDLVLFDRNNHKSLHQGALVQAGAIPV
                     FLPTARNPFGMIGAVDWEAWDEKQLRERIRKHPLVKDKNLHKKERPFRLACIQLCTYD
                     GTVYNVGKVLEKIGHLCDYVLWDEAWIGYNAFHPLFEGHSPMRLEKLGPEMPGLFSTQ
                     SVHKQGAGFSQASQIHKRDEHLKGQKRFVEHKRFNESFLMHASTSPFYPLFAALDVNA
                     KVHEGKAGEMLWDRCIELGIEARKKIREFGRYYAKEGRTAEEAWFFDPFVPDVVTIRG
                     SKHTKNVKRTAWEDLPTDVLKREQQCWVFDPKAQWHGYAGYTPGYAMVDPNKLMLLTP
                     GIDRKTGDYLDFGVPATVLANFLREQRIVPEKCDLNSILFLMTPAEDESKLNTLIAKL
                     VKFKNLWDRDAPLGEALPTIYAQNSARYAGYSLRKVCNEMHDFYRKANVKELQKKCFR
                     ATSFP"
BASE COUNT          510 a          842 c          898 g          439 t
ORIGIN      
        1 catccccgcc gacatcgtga ccgcgtatct cggccgccac ggcatcgtgc cgtcgcgcac
       61 gaccgaccac atggtcctgt tcctgttctc gatgggtgtc acgaagggca agtggggcac
      121 gctgctgaac acgctgctcg acttcaaggt cgactacgac cgcaacgcgc cgctcgacga
      181 ggtgttgccc aacgtcgcgg ccgcggcgcc ggatcgttac gccggcctgg gactcaagga
      241 cctcggcgac gaaatgtggg cgcacttgcg caagagccgg caggggcact ggcaagcgca
      301 ggcctatgcg tcgctgccga agccggtgat gacaccgcgc cgcgcgttcc agatgctgat
      361 ggcgaacgac gccgagaagg tgccgctcgc gaagatggcg aaccgcgtcg ccgcggtcgg
      421 tgtgattccg tatccgcccg gcattccgat cgtgatgccc ggcgagaacg tcggtcccgc
      481 cgacggcccc tggatcacgt acctgcgcac gctgcaggag tacggccacc gtttcccggg
      541 cttcgcgaag gaagtcgaag gcacggaaga gcgcgacggc acgtattaca tctactgcgt
      601 gaaaaagtag cgtccgccgg aggcagcgca tgatgcagtt cgcagccaaa gcgccgacga
      661 ttccgatccc gttccaacgg ctgttgaagg tcgtcgcggt cgtcgatggt gaagacggcc
      721 aagttcgtgc gctcctcgag cggatcaagg ccgaaggtta cgaggtcgag gtcgccgacc
      781 gttacgaccg cgacgtgtcg gaggacgccg aagtcggcgc ctacatcgtg tccgtcgacg
      841 gcaaacgcct gaagccggcg cgcaagatgg cgcaggccgt ccgtcggatc gggttcaaga
      901 cgccgctgtg ggcgctcgcg gattcccacg agatcgccga tgtcgaagca gtcgccggcg
      961 tcggcgaggt cgacggctac atctatctcg gccaacagac gccgacgttc tacgcgaagc
     1021 aggtcgtcgc gagcgtcgtc gagtacggca tgagcctgct gccgccgttc ttcggcggcc
     1081 tcatggccta cgacgcggag gcgaacgtgt cgttcgcgtg ccccggtcac caaggcggcg
     1141 agttctatcg gaagtcgccg cccgggcagc tgttcttcaa gcacttcggc gagcagatct
     1201 tccgcaacga tctctgcaac gcggacgtgg acctcggcga tctgctgatt cacgtcggcg
     1261 cggccgtcga cgcgcagcgg catgcggccg ccgtgttcgg cgcggatcga acgtacttcg
     1321 tgttgaacgg gacgtcgtcg tcgaacaagg tcgtcacgca agcgatgctc aagcgcggag
     1381 atctcgtgct gttcgaccgc aacaaccaca agtcgctgca ccaaggcgcg ctcgtgcagg
     1441 cgggcgcgat tccggtcttc ctgccgacgg cgcgcaatcc gttcggcatg atcggcgccg
     1501 tcgactggga ggcgtgggac gagaagcagc tgcgcgagcg aatccgcaag catccgctcg
     1561 tgaaggacaa gaacctgcac aagaaggaac ggccgtttcg cttggcgtgc atccagctgt
     1621 gcacgtacga cggcacggtc tacaacgtcg gcaaggtgct cgagaagatc ggtcacctgt
     1681 gcgactacgt gctgtgggac gaggcgtgga tcggctacaa cgcgttccat ccgctgttcg
     1741 aaggccacag cccgatgcgt ctcgagaagc tcgggccaga gatgccgggg ctgttctcga
     1801 cgcagtcggt gcacaagcag ggcgcggggt tctcgcaggc gtcgcagatt cacaagcgcg
     1861 acgagcacct gaaaggccag aagcgcttcg tcgagcacaa gcgcttcaac gagtcgttct
     1921 tgatgcatgc gtcgacctcg ccgttctacc cgctgttcgc ggcgctggac gtaaacgcga
     1981 aggtccacga gggcaaggcc ggcgagatgc tgtgggaccg gtgcatcgag ctcggcatcg
     2041 aagcgcgcaa gaagattcgc gagttcgggc gctactacgc gaaggagggg cgcacggccg
     2101 aggaggcgtg gttcttcgat ccgttcgtgc ccgacgtcgt gacgattcgc ggctcgaagc
     2161 acacgaagaa cgtgaagcgc accgcgtggg aggacctccc gaccgacgtg ctgaagcgcg
     2221 agcagcagtg ctgggttttc gatccgaagg cccagtggca cgggtatgcg ggctataccc
     2281 ccggctacgc gatggtcgac ccgaacaagc tgatgctgtt gacgccgggc atcgaccgca
     2341 agaccggcga ttacctcgat ttcggcgtgc cggccaccgt gctcgcgaac ttcctgcgcg
     2401 agcagcgcat cgttcccgag aagtgcgact tgaacagcat cctgttcctg atgacgccgg
     2461 ccgaggacga gagcaagctg aacacgctga tcgcgaagct cgtgaagttc aagaacctct
     2521 gggaccgcga cgcgccgctc ggcgaggcgc tgccgacgat ctacgcgcag aactccgcgc
     2581 gttacgccgg gtactcactg cgcaaggtct gcaacgagat gcacgacttc tatcgcaagg
     2641 cgaacgtcaa ggagctgcag aagaagtgct tccgggcaac gagcttccc
//
LOCUS       DATCUD010000197         1552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16297, whole genome shotgun sequence.
ACCESSION   DATCUD010000197 DATCUD010000000
VERSION     DATCUD010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16297"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..342
                     /locus_tag="VIQ99_02815"
     CDS             <1..342
                     /locus_tag="VIQ99_02815"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008676914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M13-type metalloendopeptidase"
                     /protein_id="HEY9182101.1"
                     /translation="MRVNGQLTMGENIGDLGGVQMAYAAYRRHLGTATAPVLDGITGE
                     QRFFLAWAQAWRTLLREDRLRSQLVTDPHSPPEYRVNGVVRNVDAWYEAFGVTAEDAL
                     FLPPEERVRIW"
     gene            339..1142
                     /locus_tag="VIQ99_02820"
     CDS             339..1142
                     /locus_tag="VIQ99_02820"
                     /inference="COORDINATES: protein motif:HMM:NF023828.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3667 domain-containing protein"
                     /protein_id="HEY9182102.1"
                     /translation="MTNDEAASACLNCGTPLAGAYCSACGQKVTPLAPTLGYFVHELT
                     HELLHVDGKIFRSVRLLLTKPGFLTREILAGRRASYVSPIRLYLVFSVVALAVGALGV
                     VDASDVRVTYTPDPGEVLTPEIEARMAETSQAVDQALKVWVPRAMFVLVPLFAALVML
                     SRRSLGRTYPQHLYFAVHVHAVWLFANAVNTLLDAVPAPYVGPVGGAIVSIYSVGYFL
                     LAFHRVYETTVWGALWRAALIGSIYVLLLILTIFGIMAPFIFGFGEGAP"
     gene            1139..>1552
                     /locus_tag="VIQ99_02825"
     CDS             1139..>1552
                     /locus_tag="VIQ99_02825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY9182103.1"
                     /translation="MKPQHRALVAVACTAAFATQPSFAQSESLDDTAAFQDFLREVRA
                     EALERGISAATLDSVFPTIELHRRAVEEDRSQAEFVLTYERYLRRVSPRRIEQGRRLM
                     ADQGAMIGEVAAAYGVQPRFVVAIIGLESDYGTYPV"
BASE COUNT          224 a          520 c          520 g          288 t
ORIGIN      
        1 atgcgcgtga acgggcagct cacgatgggc gagaacatcg gtgatctcgg cggcgtgcag
       61 atggcctacg ccgcgtaccg ccgtcatctc ggcacggcta cggctccggt gctcgacggg
      121 atcacgggag agcaacgctt ctttctcgct tgggcacagg cgtggcggac gctgctgcgc
      181 gaagaccgtc tgcgctcgca gctcgtgacg gatccgcaca gcccgcccga ataccgcgtc
      241 aacggcgtcg tccgcaacgt cgatgcgtgg tacgaggcgt tcggcgtgac tgcggaggac
      301 gcgttgtttc tgccacccga ggagcgcgtc cgcatttggt gacgaatgac gaagcggcgt
      361 cggcctgcct gaactgcggc acgccgctcg cgggtgcgta ttgctccgcg tgcggccaga
      421 aagtgacgcc gctcgcgccc acgctcggct actttgtgca cgagctcacg cacgagctcc
      481 tgcacgtcga cggcaagatc ttccgctcgg tgcgcctgct gctgacgaag ccggggttcc
      541 tgactcgcga gatcttggcg gggcggcgcg cgagctatgt ctcgccgatt cggctgtacc
      601 tcgtcttcag cgtcgtcgcc ctcgcggtcg gcgcgctcgg cgtggtcgac gccagcgatg
      661 tgcgcgtcac ttatacgccg gacccgggcg aagtcctgac cccggagatc gaagcgcgga
      721 tggccgaaac ctcgcaggcc gtcgaccaag cgctgaaggt ctgggtgccg cgcgcgatgt
      781 tcgtgctcgt gcccttgttc gcggcgctcg tgatgctatc tcgccggagc ctcgggcgca
      841 cgtacccgca gcatctgtat ttcgcggtcc acgtccacgc ggtctggctg ttcgcgaacg
      901 ccgtgaacac gctgctcgac gccgtccctg caccgtacgt gggcccggtc ggcggcgcca
      961 tcgtcagcat ctattcggta ggctatttcc tgcttgcgtt tcaccgcgtc tatgaaacca
     1021 cggtctgggg cgcgctctgg cgcgcggcgc tgatcggctc gatctacgtc ctgctcttga
     1081 tactaacgat cttcgggatc atggccccgt tcatattcgg cttcggggaa ggagccccat
     1141 gaagccgcag caccgcgcgc tcgtcgcggt ggcgtgtacc gccgcattcg cgacgcagcc
     1201 ctcgttcgca cagtcggaat cgctcgacga cacggccgcc tttcaggact tcctgcgcga
     1261 ggtgcgcgcc gaagcgctcg agcgtggcat ttccgccgcg acgctcgaca gcgtgtttcc
     1321 gacgatcgag ctgcatcgcc gcgccgtcga ggaggatcgc tcgcaagccg agttcgtgct
     1381 gacgtacgag cgttatctgc ggcgcgtgag cccgcgccgg atcgagcagg gccggcgctt
     1441 gatggccgac cagggcgcca tgatcggcga agtcgccgcc gcatacggcg tgcaaccgcg
     1501 cttcgtcgtc gcgatcatcg ggctcgagag cgactacggg acgtatccgg tc
//
LOCUS       DATCUD010000198         2856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2164, whole genome shotgun sequence.
ACCESSION   DATCUD010000198 DATCUD010000000
VERSION     DATCUD010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2164"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VIQ99_02830"
     CDS             <1..373
                     /locus_tag="VIQ99_02830"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9182104.1"
                     /translation="LTSTNAIQAGEMHYNEGGASPYHLHKGTDANPDGADHVYMTFKG
                     RGKVDVGDTSQEIEPGTLVYFPPGVPHRLNAHGGTLDYFEIQAWRSFKTTVLSKEAAS
                     GLKWYYERDSANAPLVEWNQS"
     gene            complement(383..1093)
                     /locus_tag="VIQ99_02835"
     CDS             complement(383..1093)
                     /locus_tag="VIQ99_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY9182105.1"
                     /translation="MVFLGLAKGGFSGVGIIATPLIALTVPPVQAAAIVLPILIVQDA
                     ISVWVYRRDWDAWNLKVLLPGAVLGIGAGWALAARVSEVYVRLALGLVVCAFVLNVWF
                     GATGKAVRRPSTLSGLFLGTLSGFTSMISHAGAPPFQMHLLPQKLDRVRLAATSAVFF
                     AALNAIKLVPYFLLGQFSTENLATSAVLVPFAILTNLLGIWLVRFVRHESFYRITYVL
                     VFLISLELIRGGVMGIVR"
     gene            complement(1139..>2856)
                     /locus_tag="VIQ99_02840"
     CDS             complement(1139..>2856)
                     /locus_tag="VIQ99_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008615128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9182106.1"
                     /translation="GDLPVCDFTGGTPPELIMYWGHNPPHSGPDGETRFNVREALLHK
                     PRLITIDPRETVCAKKSEIWLQLRPGTDDALGLAFLNVIIEEDLYDHDFCEKYTHGFK
                     ELAEHVHKYTPEWAAPITWVPADKIRAAARLFATVKPAMLEWGCAIEHTPKCIQTIRA
                     LSMIPAITGNLDVPGGWIFGMKGAGRFPSLIENLDPEVEKKRLGYDKYKMLCAEGADL
                     PACHIPTLIDAMLYGEPYRVRAFLVFGNNTLTTYANVNMVYKALMKLDFMVCADLFMT
                     PTAELADIVLPAASWPEINQICALPTIAGNVVMSNQKVVRIGECKSDEEIFVELARRM
                     KLPVCTDSVEDVLDQMLKNGGQKEDFRGLTERGWIHVPQKYRKYEAQGFKTPTKKVEL
                     YSTRFEKMGYAPLPYYEEPPESPLSTPEVSAEYPLVLTTGGRIPTFFNSEHRQLPLCR
                     KGHPDPLCDIHPDTAAEYGIADGEWMVIETRRGRIKQKANVTTKIDPRVIHCEHGWWF
                     PEREGPDYGVWESNANLLTDNRGPFDPQMGTYQLRALLCRVERLTPENDHFGPPSLEA
                     ATAPA"
BASE COUNT          536 a          926 c          901 g          493 t
ORIGIN      
        1 actaacgtcg acgaatgcaa tccaggccgg cgagatgcac tacaacgagg gcggcgcatc
       61 gccataccac ctgcacaagg gcacggacgc gaaccccgac ggtgcggatc acgtgtacat
      121 gacgttcaaa ggtcgcggca aggtcgacgt cggcgacacg tcgcaggaaa tcgagcccgg
      181 cactctcgtt tatttcccgc ccggtgtgcc gcatcggctc aacgctcatg gcggcacgct
      241 cgactacttc gagatccagg cgtggcgaag cttcaagacc accgtgctga gcaaggaggc
      301 cgcgtcgggg ctcaagtggt actacgagcg tgacagcgcg aacgcgccgc tcgtggaatg
      361 gaatcagagc taagcacgtc ggtcaacgaa cgatccccat cactccgccg cggatcaact
      421 cgagcgagat caagaacacg aggacgtaag tgatccggta gaacgattcg tgccgcacga
      481 agcgcacgag ccagatgccg agaagattgg tcaggatcgc gaacggaacc agcacggccg
      541 acgtggccag attctccgtc gagaactgcc cgagcaggaa gtacggcacc agcttgatcg
      601 cattcagcgc cgcgaagaat accgccgacg tcgctgcgag tcgcacgcgg tcgagcttct
      661 gcggcaacag atgcatctgg aacggcggcg cgcccgcgtg cgagatcatg ctcgtgaagc
      721 ccgagagcgt gcccaggaac agtcccgaaa gcgtgctcgg tcgccgcacc gccttgcccg
      781 tggcgccgaa ccacacgttc agcacgaacg cacaaacgac gaggcccaag gccaggcgca
      841 cgtagacctc ggagacacgc gctgcgagcg cccagccggc gccgataccg agcaccgcgc
      901 cgggcagcag caccttgagg ttccaggcgt cccagtctcg tcggtagacc cacaccgaaa
      961 tcgcgtcctg cactatcagg atcggtagca cgatcgccgc cgcctgcacc ggcggaacgg
     1021 tcagtgcgat caggggcgtg gcgatgatgc cgactcccga gaacccgcct ttggcaagac
     1081 cgaggaatac caccccaacg atggcagcgg cgtagaaaag cgggtcggag atcaacgtct
     1141 aggcgggtgc cgtcgccgcc tccaacgacg gaggcccgaa gtgatcgttc tccggcgtga
     1201 gccgctcgac gcggcacaac agcgcgcgca gctgatacgt gcccatctgc ggatcgaacg
     1261 gcccgcggtt gtcggtcaag aggttcgcgt tcgactccca gacaccgtag tcaggaccct
     1321 cgcgttccgg gaaccaccag ccgtgctcgc agtggatcac gcgcgggtcg atcttcgtcg
     1381 tcacgttcgc cttctgcttg atgcggccgc ggcgcgtctc gatgaccatc cattcgccgt
     1441 ccgcgatccc gtactcggca gcggtgtccg ggtggatgtc gcaaagcgga tcggggtggc
     1501 ccttcctgca cagcggcagc tgccgatgct ccgagttgaa gaacgtcgga atccgtccgc
     1561 cggtcgtcag cacgagcgga tactcggcgg acacttcggg cgtgctgagc gggctctcgg
     1621 gcggctcctc gtagtacggc agcggcgcat aacccatctt ctcgaagcgc gtcgagtaga
     1681 gctcgacctt cttcgtcgga gtcttgaagc cctgcgcttc gtatttccgg tatttctgcg
     1741 gcacatggat ccagccgcgt tccgtcaatc ccctgaagtc ttccttctgg ccgccgttct
     1801 tcagcatctg atcgagcacg tcctcgaccg agtccgtgca gaccggtagc ttcattcgcc
     1861 gcgcgagctc gacgaaaatc tcttcgtcgg acttgcattc gccgatgcgc acgaccttct
     1921 gattgctcat gacgacgttg cccgcgatcg tgggcagcgc gcagatctga ttgatctcgg
     1981 gccacgacgc ggcgggcaac acgatgtcgg cgagctcggc cgtcggcgtc atgaacagat
     2041 cggcgcagac catgaagtcg agcttcatga gcgctttgta gaccatgttc acgttcgcgt
     2101 acgtcgtcag cgtgttgttg ccgaagacga ggaacgcgcg cacgcgatac ggctccccat
     2161 atagcatcgc gtcgatcagc gtcgggatgt gacaggccgg caagtcggcg ccttcggcgc
     2221 agagcatctt gtacttgtcg tagccgagcc gtttcttctc gacctcgggg tcgaggttct
     2281 ctatcaggct cgggaaacgg cccgcgccct tcatgccgaa gatccagccg cccggcacgt
     2341 cgaggttgcc ggtgatcgcc gggatcatcg acagcgcgcg gatcgtctgg atgcacttcg
     2401 gcgtgtgctc gatcgcacag ccccactcga gcatcgcggg cttgacggtc gcgaacagcc
     2461 gcgccgccgc gcgaatcttg tcggccggca cccacgtgat cggcgccgcc cattccggcg
     2521 tgtacttgtg gacgtgctcg gcgagctcct tgaagccgtg cgtgtacttc tcgcagaagt
     2581 cgtgatcgta gaggtcttcc tcgatgatca cgttcaagaa cgcgagcccg agcgcgtcgt
     2641 ccgtgcccgg ccgcagctgc aaccagatct cggatttctt ggcgcagacc gtctcgcgcg
     2701 gatcgatcgt gatgaggcgc ggtttgtgca gcagcgcctc gcgaacgttg aagcgcgtct
     2761 cgccgtcggg gcccgaatgc ggcgggttgt gcccccagta catgatgagc tcgggcggcg
     2821 tgccgccagt gaaatcgcaa acgggcaggt cgccca
//
LOCUS       DATCUD010000199         1721 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73068, whole genome shotgun sequence.
ACCESSION   DATCUD010000199 DATCUD010000000
VERSION     DATCUD010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73068"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..410)
                     /locus_tag="VIQ99_02845"
     CDS             complement(153..410)
                     /locus_tag="VIQ99_02845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182107.1"
                     /translation="MEFSRHQLKSLALIAVLRSATPPNPSPAGTFSTICTSRSGSAYG
                     SGRSKTAFMTLKIAAVAPSPTASVSEVTIVRPGVRLKPRSA"
     gene            complement(418..>1721)
                     /locus_tag="VIQ99_02850"
     CDS             complement(418..>1721)
                     /locus_tag="VIQ99_02850"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9182108.1"
                     /translation="VGVVLAIVCTNVANLLLVRGTRRQQEIAIRRSLGATRWRIARQV
                     LTESLVLSVFASLVAIAIAFAGVWLLKFTATTYVNPRNGFAPSVLPRLDEIAIDPPVL
                     AFVALLSIVTGVLFGLLPALRLSKYGDRGHTSASQLSTLVRNSRLGHVLATVQLACAM
                     ALLIGAGLLVGSFLKLTGIDPGFDARGVLSFELVVPGDSTAERKLEVAETFVARLEAH
                     PRVTSAGFADLPPGTSITFTLGLLIPEGKTGLEMLEESRAEPPGAGTRQVRVSPGYLR
                     ALGARLGAGLGLDATQLQSERVGLGTRRLERNSVGEPSLCAPKGRSVGRRDDDHRYPE
                     RLVAELRRHDTHDGKDPGIELNPAADDIGSGIEILAPCRLTEHDDVGVRALIVGHEAA
                     PEQRLHAAHGEQRRRNTLAVELPAAVGGRERPAFAPHHREV"
BASE COUNT          298 a          584 c          574 g          265 t
ORIGIN      
        1 gacgggtggc cgccgcgggc cgctgaagag gaagcgcagc gcctctttgg ggatcgtgac
       61 tcgatcttga cggagtgcca acagatcgac acacgcttcg agcagagaag aaaaatgttc
      121 gctcacctcg ctgacatcgc agccgacgtc cgctacgcgc tgcgcggttt caagcgcacg
      181 cccggcctca cgatcgtgac ctcgctcacg ctcgcggtcg ggctcggcgc gacggccgcg
      241 atcttcagcg tcatgaacgc cgtcttgctc cggccgctgc cgtatgccga gcccgaacgg
      301 ctcgtgcaga tcgtcgagaa tgtgccggcg ggcgaagggt ttggcggtgt cgcggagcgc
      361 aggaccgcga tgagcgccaa cgatttcaac tggtggcgcg agaactccac gacgctttca
      421 cacttcgcga tgatgtggcg cgaaagccgg acgctcgcga cccccgacgg cagccggcaa
      481 ctctacggcc agagtgtttc gccggcgctg ttcgccatgc gcggcgtgca gccgctgctc
      541 gggcgcggcc tcgtggccga cgatgagcgc ccggactccg acgtcgtcgt gttcggtgag
      601 gcggcatggc gcgagtattt caattccgct cccgatatcg tcggccgcag gattgagctc
      661 gattcccgga tcttttccgt cgtgggtgtc atgccgccgc agttcggcga ccaggcgttc
      721 tgggtaccga tggtcgtcgt cgcgacgacc aacagaacgt cctttggggg cgcagaggct
      781 cggctcgccg acggagtttc gctcgagacg gcgagtgccg aggccaacgc gctcggattg
      841 caactgcgtg gcatcgagcc cgagcccggc gccgagccgc gcacccaacg cgcgcaggta
      901 gcccgggctc accctcacct ggcgcgtccc ggcgccgggt ggctctgccc gcgattcttc
      961 gagcatctcc aaccctgtct tgccttccgg aatcagcaac cccaaagtga atgtaatcga
     1021 tgtgcccggt ggcagatccg cgaacccggc gctcgtcacg cgcggatggg cctcgagacg
     1081 cgccacgaac gtctccgcaa cttcgagctt gcgctccgcc gtggagtcgc cgggcaccac
     1141 gagctcgaag ctcaagaccc ctcgcgcatc gaaaccgggg tcgatgcccg tgagcttcag
     1201 gaagcttccg acgagcaggc cggcgccgat gagcagcgcc atcgcgcacg ccagttgcac
     1261 cgtggcgagc acgtggccga gccgcgagtt gcgcacgagc gtcgagagct gcgatgcgga
     1321 cgtgtgcccg cggtcgccgt acttcgagag gcgcagcgcc ggcagcagcc cgaacagcac
     1381 gccggtcacg atcgacagca gggcgacgaa tgcgagcacg ggcggatcga tcgcgatctc
     1441 atcgagtcgc ggcaagaccg acggtgcgaa accgttccgc ggattgacgt acgtcgtcgc
     1501 ggtgaatttg agcagccaca cgcccgcgaa cgcgatcgcg atcgcgacca ggctcgcaaa
     1561 cacggacagc acgagactct ccgtgaggac ctgccgcgcg atgcgccagc gcgtcgcgcc
     1621 cagcgagcgg cggatcgcaa tctcctgctg ccgccgcgtg ccgcgcacga gcaagagatt
     1681 cgcaacgttc gtgcaaacga tcgctagcac gacgccgacg g
//
LOCUS       DATCUD010000200         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2168, whole genome shotgun sequence.
ACCESSION   DATCUD010000200 DATCUD010000000
VERSION     DATCUD010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2168"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VIQ99_02855"
     CDS             <1..314
                     /locus_tag="VIQ99_02855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182109.1"
                     /translation="FTFMTVPQLKQAVALGAVIEITAGSLFREGPGRARVVDAIRAIG
                     PESFFVASDSGLVGTPNHTDALVLAARVLRENGWDEHALDVMFKDNPARLLKLPLRKT
                     N"
     gene            344..817
                     /locus_tag="VIQ99_02860"
     CDS             344..817
                     /locus_tag="VIQ99_02860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182110.1"
                     /translation="MRTVFSVLAVGALCVLATASSAQSGRLFLDEAPLDKAVDFPREK
                     LAEYYAKMTKEQIGVVRLLEGGLYNVNIRHVENATPDKYSTEFHEDTIDVWVIQEGGG
                     TLVTGGEEVDGKHRGGIERQGKVGDVIFIPAGIYHGMKDSKVTTWLNIRFPEHRN"
     gene            844..>1695
                     /locus_tag="VIQ99_02865"
     CDS             844..>1695
                     /locus_tag="VIQ99_02865"
                     /inference="COORDINATES: protein motif:HMM:NF040043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6282 family protein"
                     /protein_id="HEY9182111.1"
                     /translation="MTARNTRLALVAASGLAWGLTLAAQNAPVNDPALKGAIDIHSHL
                     DPDGFGPGRNGRNMDVLDMAKLAKESGMRGFVIKMHYDQSADDAYIVRKLYPDLEVFG
                     GIGTNFATGGLNPAAIRQMADVKGGWGRIVWMPTWDAKHYVEHNGNDRPFITVAKNGE
                     LVPEAKALIAAVAEVNHKTRVSGGQMVLATGHNAPEEVLLMVKEARRLGLPVVVTHPL
                     LESVGMSIEQMKQAVEMGAYLEFVTAFTRQEATIKEYSEAIREIGPEHCIVSSDKGQG
                     RGEEGHDG"
BASE COUNT          342 a          528 c          571 g          254 t
ORIGIN      
        1 agttcacgtt catgaccgtg ccgcagctga agcaggccgt tgcgctcggc gcggtcatcg
       61 agatcacggc cggctcgctg tttcgcgaag ggcctgggcg agcgcgcgtc gtcgacgcga
      121 ttcgcgcgat cgggccggag agcttcttcg tcgcgagcga cagcggcctc gtcggaacac
      181 cgaaccatac cgacgcgctc gtcctcgcgg cgagggtgct gcgcgagaac ggttgggacg
      241 agcacgcgct cgacgtgatg ttcaaagaca atcctgcgcg gctgctgaag ctgccgctgc
      301 gaaagacgaa ctgataacgc gaacgttcaa atagggggaa gccatgagaa cggtgttttc
      361 ggtgctggcc gtaggtgctc tctgcgtctt ggcgacggcg tcctcggcgc agagcgggcg
      421 gctctttctc gacgaggcgc cactcgacaa ggccgtcgac ttcccgaggg agaagctggc
      481 cgagtactac gcgaagatga cgaaggagca gatcggcgtc gtgcgcctgc tcgagggcgg
      541 cctctataac gtcaacatcc gccacgtcga gaacgcgacg cccgataagt acagcaccga
      601 gttccacgag gacacgatcg acgtttgggt cattcaagaa ggcggcggca cgctcgtgac
      661 cggcggcgag gaagtcgacg gcaagcaccg cggcggcatc gagcggcagg gcaaagtcgg
      721 cgacgtcatc ttcattccgg ccggcatcta ccacggcatg aaggactcga aggtcaccac
      781 gtggctcaac attcgtttcc ccgagcatcg caactgagct cggtaccgcg gagaaataag
      841 accatgaccg ctcgcaacac acgactcgca ctggtcgcgg cttcaggcct agcgtgggga
      901 ctgacgctcg ccgcgcagaa cgcgcccgtc aacgaccccg cgctgaaagg cgcgatcgac
      961 atccattcgc acctcgaccc cgacggcttc ggccccgggc gcaacggccg caacatggac
     1021 gtgctcgaca tggcgaagct ggcgaaggaa tccggcatgc gcggcttcgt catcaagatg
     1081 cactacgacc agtcggccga cgacgcgtac atcgtgcgga agctctatcc ggacctcgag
     1141 gtgttcggcg gcatcggcac gaacttcgcg actggcggct tgaacccggc cgcgattcgc
     1201 cagatggccg acgtcaaagg cggctggggc cgcatcgtgt ggatgccgac ttgggacgcg
     1261 aagcactacg tcgagcacaa cggcaacgac cggccgttca tcaccgtcgc gaagaacggc
     1321 gagctcgtgc cggaagcgaa ggcgttgatt gccgccgtcg cggaggtcaa ccacaagacg
     1381 cgcgtcagcg gcggccagat ggtgctcgcg acgggccaca acgcacccga ggaagtgctg
     1441 ctgatggtga aggaagcgcg ccggctcggc ctgccggtcg tcgtgacgca tccgctgctc
     1501 gagtcggtcg gcatgagcat cgagcagatg aagcaggccg tcgagatggg cgcatacctc
     1561 gagttcgtca ccgcgtttac gcggcaagaa gctacgatca aggaatactc ggaggcgatc
     1621 cgcgagatcg gccccgagca ttgcatcgtg tcgagcgaca agggccaagg ccgcggcgag
     1681 gagggccacg acggc
//
LOCUS       DATCUD010000201         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2177, whole genome shotgun sequence.
ACCESSION   DATCUD010000201 DATCUD010000000
VERSION     DATCUD010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2177"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1087)
                     /gene="nuoH"
                     /locus_tag="VIQ99_02870"
     CDS             complement(20..1087)
                     /gene="nuoH"
                     /locus_tag="VIQ99_02870"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012982128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEY9182112.1"
                     /translation="MFDWLVAAWAAPQDAWQVIVGSVLKIVAVLVPLILGVAYFTYWE
                     RKILGWMHVRIGPNRVGWKGLLQPFADVIKMLLKEVVVPRNANRFLFLTAPVLSLVPA
                     FAVWAVVPLSDTFVIADIDAGLLYVLALTSLGVYGVILAGWASNSKYAFLGAMRSAAQ
                     IVAYEIAMGFALVGVLMAGGSLNLGEIILAQEGGWGFGNWFIWPLFPLFVVYFISGVA
                     ETNRAPFDVAEGESEIVAGFHVEYSGIAFGLFFLAEYANMILITALTVVFFLGGWLSP
                     FAGFGWAEGTFLAAPSIGWLLAKMVVFCFLFLWFRATFPRYRYDQIMRLGWKVLIPVT
                     IVWIGVEGVMAALEIGPWAQA"
     gene            complement(1102..>1859)
                     /locus_tag="VIQ99_02875"
     CDS             complement(1102..>1859)
                     /locus_tag="VIQ99_02875"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9182113.1"
                     /translation="LVLLGHIAQRHPNYADLRALAAGLAGVTGATLGYLSEGANAAGA
                     ALAGATPHRGVGGKGVTRPGSDARAMIETPRNAYILFGVEPSKDLADGVTALANLRKA
                     AVVAFSAYVSDDLLDVADVLLPIGTFAETAGTFVNAEGRWQSFDAAADLVGEARAGWR
                     VLRVLGNELELPRCAYQTPSDIVEELERELGALREIDPADTVYKGSFAANGRAAPVSS
                     AGLDVPIYAIDPVVRRAEALQETVLGRARQGPA"
BASE COUNT          365 a          653 c          588 g          253 t
ORIGIN      
        1 acttcgcatg tcgctctcgt tacgcctgcg cccagggccc gatctcgagc gcggccatca
       61 cgccctcgac gccgatccag acgatcgtga ccgggatcag caccttccag ccgagccgca
      121 tgatctggtc atagcggtag cgcgggaacg tggcgcggaa ccaaagaaac aggaagcaga
      181 acacgaccat cttcgcgagc aaccaaccga tgctcggcgc cgcgaggaat gtgccctcgg
      241 cccagccgaa ccccgcgaac ggcgacagcc aaccgccgag aaagaacacg acggtcagcg
      301 ccgtgatcag gatcatgttc gcgtactcgg ctaggaagaa aaggccgaac gcgataccgg
      361 agtactcgac gtggaaaccg gccacgatct cggactcgcc ctcggccacg tcgaacggtg
      421 cgcggttcgt ctcggcgacg cccgagatga agtagacgac gaacaacggg aacaacggcc
      481 aaatgaacca gttgccgaag ccccatcctc cctcttgcgc gaggatgatc tcgccgagat
      541 tcaggctgcc gcctgccatc aaaacgccga cgagcgcgaa tcccatcgcg atctcgtacg
      601 cgacgatctg agcggccgag cgcatcgcgc ccaggaacgc gtacttcgag ttcgatgccc
      661 agccggcgag gatcacgcca tacacgccga gtgacgtcag cgccaagacg tacagcaagc
      721 ccgcgtcgat gtcggcgatc acgaacgtgt cgctgagcgg cacgacggcc cagaccgcga
      781 acgccggcac cagcgacagc accggggccg tcaggaacag gaagcggttc gcattcctcg
      841 gaaccacgac ctccttcaac agcatcttga tgacgtcggc gaacggctgc agcagcccct
      901 tccagccgac gcgattcggc ccgatgcgca cgtgcatcca gcccaggatc ttgcgctccc
      961 agtacgtgaa gtacgcgacg ccgaggatca gcggcacgag cactgcgacg atttttagaa
     1021 cgctgccgac gatgacctgc caggcgtcct gcggcgcagc ccaagccgcg acgagccaat
     1081 cgaagatcgc catcgcgaag ctcatgccgg gccctgcctt gcacgaccca gcacggtctc
     1141 ctgcaacgcc tcggcgcggc gcacgacggg gtcgatcgcg tagatcggca cgtcgaggcc
     1201 ggcgctcgac acgggggcgg cgcggccatt ggccgcgaac gagcctttgt acacggtgtc
     1261 ggccggatcg atctcacgca aagcgccgag ctcgcgctcg agctcttcga cgatatcgct
     1321 cggcgtctga tacgcgcacc gcggcagctc gagctcgttg ccgagcacgc gcagcacgcg
     1381 ccagccggcg cgagcttcgc cgacgagatc cgcggccgca tcgaagctct gccaacggcc
     1441 ttccgcgttc acgaaggtgc cggccgtctc ggcaaacgta ccgatcggca gcaacacgtc
     1501 cgcgacgtcg agcaggtcgt ccgacacgta agcgctgaag gcgacgacgg ccgccttgcg
     1561 aaggtttgcg agcgcggtga cgccatcggc caggtccttg ctcggctcga cgccgaacag
     1621 gatgtaggcg ttgcgcggcg tctcgatcat cgcgcgagcg tcggagcccg ggcgcgtcac
     1681 gcctttgccg ccgacgccgc gatgcggtgt cgcccccgcg agcgcggcac cggccgcatt
     1741 cgcgccctcg ctcaggtaac cgagcgtggc gcccgtgacc ccggcgagac cggctgccag
     1801 cgcgcggaga tcggcatagt tcggatgtcg ctgcgcgatg tgccccagca gcacgagcg
//
LOCUS       DATCUD010000202         3315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9042, whole genome shotgun sequence.
ACCESSION   DATCUD010000202 DATCUD010000000
VERSION     DATCUD010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9042"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..792
                     /locus_tag="VIQ99_02880"
     CDS             <1..792
                     /locus_tag="VIQ99_02880"
                     /inference="COORDINATES: protein motif:HMM:NF028007.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY9182114.1"
                     /translation="VDDRIANLEKALAEALARSEAAESRLADQQQRLKALGTGREESM
                     RALAEARDELRRTSLERDELRKHLARVDSVQTTTLALPDNEDSAPAATGTAAPAVLPS
                     LDELMASLGEIQEPSTRVEGHLHQRVKLDTDDSEEMIPPALVFPEEYAATAKPADGAD
                     APATRLLVLLDPERPIKYPLFKEVMTIGRADVADIQINNGFLSRLHARVVSTPEGVTI
                     EDVESKNGIRVNTKLTHRQALRHGDTVDLGRLRFRFIDVASDDEA"
     gene            complement(817..1743)
                     /locus_tag="VIQ99_02885"
     CDS             complement(817..1743)
                     /locus_tag="VIQ99_02885"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY9182115.1"
                     /translation="MPGERETSITAIPGVVAAGGQWEIVWADFETADGIVGTPDGGVI
                     FAQEQTDTIRKLAPDGKEYTVLSGTRGVGSVSLDAQGRLYGVERTCTEPLNTFLPGCN
                     DLTAVAQLLPERKVLAMSFADGTPLGRLNDLVADGNGGAYFTVNGNAFYVSPAGVVSV
                     VANQDIRSNGIILSPDNRTLYVTNNTNVLAFDVRSDGTTANRRDFGSLNGDDGGDGMA
                     IDSEGRVYVTGNRGVHVLSPRGEYLGLIPTPRRPITIAFSGPDKKVLYAPSSGAVGPD
                     GKAWATPELIRNTAMTIYRLPMLSQGYDGRPK"
     gene            1981..2865
                     /locus_tag="VIQ99_02890"
     CDS             1981..2865
                     /locus_tag="VIQ99_02890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182116.1"
                     /translation="MAGLKSLIVAVAAIAAIASAAGQAPAPRPASTSVEPATGPLSPT
                     PAQRREALSRMIPKHEGYLGALAPENLNKERPAPPFNLTGTWFVDLSRAFADFRYGPP
                     YPEFIGQAKADYEYSQTLQRGQSWRDAIGQCFPAGQPMVMTRVWPIAMIQLPTVIYMI
                     SNFNNEFRQIFLDGRPWTDPDTVIYTYQGESHGRFEGDTLVVDTRYVETYNHYIDTGI
                     PISEQFRMQERIRLIENGEMLEISYIMTDPVNWVGEWRNTKRWLRVDNTDIGEVHCLP
                     DLNDNLPSTQAGRAGLEQ"
     gene            2878..3309
                     /locus_tag="VIQ99_02895"
     CDS             2878..3309
                     /locus_tag="VIQ99_02895"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182117.1"
                     /translation="MKVLENVPALAAAAILTAMSALPAGAHHSTAAFDNSRVVKLEGT
                     ITQFRWINPHASIKIDAKSEGDDPDGVWTVEMTAPNVLINEGWTRTALQVGDKVTMFV
                     NPLRNQVVLNDGSTGGLYVGVILKDGKSLGRTDGKGAGSDR"
BASE COUNT          619 a         1125 c         1056 g          515 t
ORIGIN      
        1 gtcgacgacc ggattgccaa tctcgaaaag gcgctggccg aggcgctcgc gcgcagtgag
       61 gccgcggagt cgaggctcgc cgaccagcag cagcggctga aggcgctcgg cacgggccgc
      121 gaggaatcca tgcgcgcgct ggcagaagcc agagacgagt tgcggcgcac gagcctggaa
      181 cgagacgagc tgcgcaagca cctcgcgcgc gtcgacagcg tgcagacgac gacgctcgcg
      241 ctacccgata acgaggacag cgctcccgcc gccacgggga ccgccgcccc ggccgtattg
      301 ccgtcgctcg acgagctgat ggcatcgctc ggcgaaattc aggagcccag cacgcgagtc
      361 gaagggcatc tgcatcaacg cgtcaagctg gacaccgacg actcggaaga aatgattccg
      421 cccgccctcg tgttccccga ggagtacgcg gccacggcga aacccgcgga cggcgcggac
      481 gcgccggcca cgcgcctgct cgtgctgctc gatccggagc gcccgatcaa gtacccgctc
      541 ttcaaggaag tcatgacgat cggccgcgcc gacgtcgcgg acatccaaat caacaacggg
      601 ttcttgagcc gcctgcatgc gcgcgtcgtg tcgacgccgg aaggcgtgac catcgaagac
      661 gtcgagagca agaacggcat ccgcgtgaac acgaagctca cgcatcgaca agcgctgcgc
      721 cacggcgata ccgtggactt gggcaggctg cgattccgct tcatcgacgt cgcgagcgac
      781 gacgaggctt gagactcgac gccgcttcgc gaacgcctat ttcggccgcc cgtcgtaacc
      841 ctgcgacagc atcggcagcc gatagatcgt catcgccgtg ttgcggatca gctcgggtgt
      901 cgcccaggct ttgccgtccg gtccgaccgc gccgctcgac ggcgcgtaga ggactttctt
      961 gtcgggaccc gagaacgcga tcgtgatcgg ccgccgcggc gtcggaatca gccccaagta
     1021 ctcgccgcgc ggcgacagca cgtgcacgcc gcgattgccc gtgacgtaca cccggccctc
     1081 cgagtcgatc gccatgccgt ctccgccatc gtcgccgttc agagagccga agtcgcggcg
     1141 attcgccgtc gtgccatcgg agcgcacgtc gaacgcgagc acgttcgtgt tgttcgtgac
     1201 gtacaacgtg cggttgtcgg ggctcaggat gatgccgttc gagcggatgt cttgattcgc
     1261 gacgacgctg acgacgccgg ccgggctcac gtagaacgcg ttgccattga ccgtgaaata
     1321 cgcgccgccg ttgccgtcgg cgacgagatc attgagccgg ccgagcggcg tgccgtccgc
     1381 aaacgacatc gcgagcacct tgcgctccgg caatagctgc gccacggccg tcaagtcgtt
     1441 gcagcccggc aggaacgtgt tcaacggctc cgtgcaagtc ctctcgacgc cgtacaaccg
     1501 gccttgggca tcgagcgaga ccgagccgac gcctcgcgtc ccgctgagca ccgtgtattc
     1561 cttgccgtcg ggcgcgagct tgcgaatcgt gtccgtttgc tcctgcgcga agatcacgcc
     1621 gccgtccggc gtgccgacga tgccgtccgc ggtctcgaag tcggcccaca cgatctccca
     1681 ttggccgccg gccgcgacga cacccggaat cgcggtaatg ctggtttcgc gttcgcccgg
     1741 caacagtccc tgcgccgagg ccccaacgac taagactggc gccagccaag caacccattt
     1801 cacaatgccc gcgtgcttca tatttcttgt tccccctcga gagcgaacgg cctgtaatct
     1861 cggtccccgc gcagtctagt gccgggatgt tctcgacact acctggccgg gaggccgcgg
     1921 aaacccttgt ggtagagtgg tgcccgcact gcccgggacg gagaaaccga gggggaaatc
     1981 atggccggac tcaagagttt gatcgttgcc gtcgccgcga tcgccgcgat cgcctccgcc
     2041 gcgggccaag cgcccgcccc tcggccggcc tcgacatccg tggagcccgc cacggggccg
     2101 ctctcgccga caccggcgca acgccgcgaa gcgttgagcc gcatgatccc gaagcacgag
     2161 ggctacctcg gggcgctggc gcccgagaac ctgaacaagg aacgcccggc gccgccgttc
     2221 aatctcaccg gcacgtggtt cgtcgacttg agccgcgcgt tcgccgactt tcgttacggc
     2281 ccgccgtatc ccgagttcat cggccaggcg aaggccgact acgagtactc gcaaacgttg
     2341 cagcgcgggc agtcctggcg cgacgcgatc ggccagtgct tccccgcggg gcaaccgatg
     2401 gtcatgacgc gtgtctggcc gatcgcgatg atccagctgc cgaccgtgat ctacatgatc
     2461 tcgaacttca acaacgagtt caggcagatc ttcctcgacg gccgcccctg gaccgatccc
     2521 gacacggtga tctacacgta ccagggcgag tcgcacggcc gcttcgaggg cgacacgctc
     2581 gtggtcgaca cgcgctacgt cgagacgtac aaccattaca tcgataccgg catcccgatc
     2641 tccgagcaat tccgcatgca ggagcggatt cgattgatcg agaacggtga gatgctcgag
     2701 atctcgtaca tcatgaccga cccggtcaac tgggtcggcg agtggcgcaa cacgaagcgc
     2761 tggctgcgcg tcgataacac cgacatcggc gaggtccact gcctgccgga cctgaacgac
     2821 aatttgccga gcacgcaggc cggccgcgcc ggcctcgaac agtaaggagt gcgaagaatg
     2881 aaagtgctag agaacgttcc agcgttggcc gccgcggcca tcctcacggc aatgagcgcg
     2941 ttgccggccg gagcacatca ttcgaccgcg gcgttcgata acagccgtgt cgtcaagctc
     3001 gaaggcacga tcacgcagtt tcgttggatc aacccgcacg cctcgatcaa gatcgacgcg
     3061 aagtccgagg gcgacgatcc cgacggcgtg tggaccgtcg agatgacggc gccgaacgtt
     3121 ctgatcaacg agggctggac acgcacggcg ctgcaggttg gcgacaaggt cacgatgttc
     3181 gtgaacccgc tgcggaatca agtcgtgctg aacgacggca gcacgggcgg actctacgtc
     3241 ggcgtgatcc tcaaggacgg caagtcactg ggccgcaccg acggcaaggg cgccggctcc
     3301 gaccgctgac cgcgg
//
LOCUS       DATCUD010000203         3250 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_51832, whole genome shotgun sequence.
ACCESSION   DATCUD010000203 DATCUD010000000
VERSION     DATCUD010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51832"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..999)
                     /locus_tag="VIQ99_02900"
     CDS             complement(<1..999)
                     /locus_tag="VIQ99_02900"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY9182118.1"
                     /translation="MKVGLAQINTRVGAIDANTGKVLDYAARARAQGCDVVLFPELTL
                     CGYPPEDLLLHRGLRSRVAAALTTVRDQVRGIAVYVGYPEYEGDVIYNSAALLRDGQV
                     LANHRKVSLPNYAVFDEKRYFAPGDRATVIDLDGVKLGLIICEDVWVPASCRAPAEAG
                     AEAIVVINGSPFHRTQQQTREQVLARRAEENSLPLVYVNMVGGQDELVFDGGSVVVDA
                     AGRVRFRAPLFEEGLYTVELTRGADKLVPQPGEVAPVPPLAERVYRALVLGTRDYVEK
                     NGFSGVVLGLSGGIDSALTLALAVDAIGRDRVHAVMMPSRFTSDMSREDAAMQAKAL"
     gene            complement(996..1865)
                     /gene="sucD"
                     /locus_tag="VIQ99_02905"
     CDS             complement(996..1865)
                     /gene="sucD"
                     /locus_tag="VIQ99_02905"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004385340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEY9182119.1"
                     /translation="MSILVDQNTKVICQGLTGKQGTFHTQQCLDYGTKVVAGVTPGRA
                     GETHLGLPVFNTVTEAQQATGATVSMIYVPAPFAADAILEAADAGIELVVCITEGVPV
                     LDMVKVKAVLKGTGVRLIGPNCPGIITPGGCKIGIMPGSIHEPGSIGIVSRSGTLTYE
                     AVNQTTLKGLGQSTCVGIGGDPVRGMNFIDCLELFEKDPATRGMIMVGEIGGSDEEAA
                     AEYIANHVTKPVVGYIAGVTAPPGKRMGHAGAIISGGKGTAKEKFAALEKAGVRTVRS
                     LADLGDAMAAALK"
     gene            complement(1862..3031)
                     /gene="sucC"
                     /locus_tag="VIQ99_02910"
     CDS             complement(1862..3031)
                     /gene="sucC"
                     /locus_tag="VIQ99_02910"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEY9182120.1"
                     /translation="MNLHEYQSKALFAEYGIPVPQGQVATTPLEARKAATVLGGHLWV
                     VKAQVHAGGRGKAGGVKLAKSVAEVEQHAKAMLGTRLVTHQSGAEGLPIDYVYVESGS
                     SIERELYLSFVVDRSKERIAVMASAAGGMDIEEVAHKTPEKIITLTLHPAAGFEDYQT
                     RKLGFGLGLTPDQQAELRDILRKLTKLFRECDASLVEVNPLIVTKDGHVVALDAKINI
                     EDNALFRQKRLAALRDKAQEDERERVAHENDLNYVSLDGNIACMVNGAGLAMATMDLI
                     KLHGGEPANFLDVGGGATAERVTQAFKIILTNKNVKAILVNIFGGIVRCDTIAEGVIT
                     AVREVHVGVPVVVRLEGTNVEKGREMLAASGLKVIAATGLTDAASKVVKLAGAAA"
BASE COUNT          507 a         1121 c         1048 g          574 t
ORIGIN      
        1 gagcgctttg gcttgcatcg ctgcgtcttc gcggctcatg tccgacgtga accgcgaggg
       61 catcatgacc gcatgcacgc ggtccctgcc gatcgcatcg acggcgagcg ccagcgtcag
      121 cgccgaatcg atgcctcccg acaggccgag cacgacgccg gagaatccgt tcttctccac
      181 gtagtcgcgc gtgccgagca cgagcgcgcg atacacacgc tccgcaagcg gcggcaccgg
      241 cgccacctcg cccggctgcg ggacgagctt gtccgcgccg cgcgtgagct cgacggtgta
      301 gagcccctcc tcgaacagcg gcgcgcggaa ccggacgcgg cccgcggcgt cgacgacgac
      361 ggagccgccg tcgaacacga gctcgtcctg gccgccgacc atgttcacgt agacgagcgg
      421 cagcgaattc tcctcggcgc gccgggcgag gacttgctcg cgagtttgtt gctgcgtgcg
      481 atgaaacggc gagccgttga tcacgacgat cgcctccgca cccgcttcgg ccggcgcgcg
      541 gcacgacgcc ggcacccaga cgtcctcgca gatgatcagg ccaagtttga cgccgtcgag
      601 atcgatcacg gtcgcccgat cgccgggcgc gaagtagcgt ttctcgtcga acaccgcgta
      661 gttcggcaac gagaccttgc gatgattcgc gagcacctgg ccgtcgcgca gcaacgcggc
      721 gctgttgtag atcacatcgc cttcgtattc gggatagccg acgtagaccg cgatgccgcg
      781 gacttggtcg cgaaccgttg tgagcgcggc cgccacgcgg ctccgtaaac ctcgatgcag
      841 cagcagatcc tcgggcggat aaccgcacag cgtgagctcg gggaacagca cgacgtcgca
      901 gccctgcgcg cgagcgcgcg ccgcgtaatc gagtaccttg ccggtgttcg cgtcgatcgc
      961 gccgacgcgc gtgttgatct gggccagccc gaccttcact tcagcgccgc ggccatggcg
     1021 tcgccgaggt ccgcgagcga gcggaccgtg cgcacgccgg ccttctcgag cgccgcaaat
     1081 ttctccttcg cggtgccctt gccgcccgag atgatcgcgc cggcgtggcc catgcgcttg
     1141 ccgggcggag ccgtgacgcc ggcgatatag ccgacgacgg gcttcgtcac gtggttcgcg
     1201 atgtactccg ccgcggcttc ctcgtccgag ccgccgatct cgccgaccat gatcatgccg
     1261 cgcgtggcgg gatccttctc gaacagctcg aggcagtcga tgaagttcat gccgcggacg
     1321 gggtcgccgc cgataccgac gcacgtgctc tggcccaggc ccttcagcgt ggtctgattc
     1381 acggcctcgt aggtcaacgt gcccgagcgc gacacgatcc cgatcgagcc gggctcgtgg
     1441 atggagcccg gcatgatacc gatcttgcag ccgcccggcg tgatgatgcc ggggcaattc
     1501 gggccgatca ggcgaacacc ggtacccttc agcacggcct tgaccttgac catgtcgagc
     1561 acgggcacgc cttccgtgat gcagacgacg agctcgatgc cggcatcggc agcctcgagg
     1621 atcgcgtcgg ccgcgaatgg cgccggcacg tagatcatgc tgaccgtggc gcccgtggcc
     1681 tgctgcgcct cggtcaccgt gttgaacacg ggcaacccga ggtgcgtctc gccggcgcgg
     1741 cccggcgtga cgcccgcgac gaccttcgtg ccgtagtcga ggcactgttg cgtgtggaac
     1801 gtgccttgct tgcccgtaag gccctggcag atcaccttcg tgttctggtc gacgaggatg
     1861 ctcatgccgc ggctcccgcg agcttcacga ccttcgacgc cgcatccgtg agccccgtgg
     1921 ccgcgatgac tttcaggccg ctcgcggcca gcatctcgcg ccctttctcg acgttcgtgc
     1981 cctcgagccg cactacgacg ggcacgccga cgtgcacttc tctgacggcc gtgatgacgc
     2041 cctcggcgat cgtgtcgcag cgcacaatgc cgccgaagat gttcacgagg atcgctttga
     2101 cgttcttgtt cgtcaggatg atcttgaacg cctgcgtcac gcgctcggcc gtagccccgc
     2161 cgccgacatc gaggaagttc gcaggctcgc cgccgtgcag cttgatcaag tccatcgtcg
     2221 ccatcgcgag cccggcgccg ttcaccatgc aagcgatatt gccgtcgagc gacacgtagt
     2281 tgaggtcgtt ctcgtgcgcg acgcgctcgc gctcgtcttc ctgcgccttg tcacgcagtg
     2341 cggcgagccg cttctggcgg aacagcgcgt tgtcctcgat gttgatcttc gcgtcgagcg
     2401 cgacgacgtg gccatccttc gtgacgatca gcggattcac ctcgaccaag ctcgcgtcgc
     2461 actcgcgaaa cagcttcgtg agcttgcgca ggatgtcacg gagctcggcc tgctgatcgg
     2521 gtgtaaggcc gagcccgaac ccgagcttgc gcgtttggta gtcctcgaag ccggccgccg
     2581 gatgcagcgt cagcgtgatg atcttctcgg gagtcttgtg cgcgacctct tcgatgtcca
     2641 tgcctccggc ggccgaggcc atgaccgcga tgcgctcctt gctgcggtcg acgacgaagc
     2701 tcaaatacag ctcgcgctcg atgctcgagc ccgattcgac gtacacgtag tcgatcggca
     2761 gcccctcggc accgctctgg tgcgtcacga gccgcgtgcc gagcatcgcc ttggcatgct
     2821 gctcgacctc ggccaccgat ttcgcgagct tgacgcctcc ggccttgccg cggccgcccg
     2881 cgtgaacctg ggccttaacg acccacagat gaccgccgag cactgtggcg gccttgcgcg
     2941 cctcgagcgg cgtcgtggcg acctgaccct gtggcacggg aatcccgtat tcggcaaaca
     3001 aagccttcga ctgatattcg tgcaaattca tggggaaaat gatcttcagc ggttggcggg
     3061 cggcggtatt ctccatgaaa cgcgggaggc ccgcaaagcg tgagcggagg cgccggagcg
     3121 ctcgcagcgt tcaggtagaa tccggcgcca tgtccgccgt cgataccgtc gacatcgagc
     3181 gttcgacgtc cccacctcgg tccgcaggcc agtcggcgac gggcgatttc ggctggcgag
     3241 tcctgatcct
//
LOCUS       DATCUD010000204         2453 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_87275, whole genome shotgun sequence.
ACCESSION   DATCUD010000204 DATCUD010000000
VERSION     DATCUD010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2453)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2453)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2453
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87275"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1991)
                     /locus_tag="VIQ99_02915"
     CDS             complement(<1..1991)
                     /locus_tag="VIQ99_02915"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182121.1"
                     /translation="MNDRTTSGAPRARIPQRHLLPLAIATALGSTVLPAALMAQEALE
                     EIVVTARFREENLQETPLAITAVTGTLLEARGATSTLDLDAFVPNTVIAPLGAGWGST
                     AAAFIRGIGLGDNSLSFEPGVPIYIDDVYHGRPQGAVMDLLDVERVEVLRGPQGTLFG
                     KNTLGGAVRIVSRKPDGDGSGFLDVGAGSRDRLNIRGSYDFALSDTVYARVSASAKTQ
                     DGYFDILDYECVNGAGTLGFGGAGITAGVFNTTSELTTAITTHPAIGGIALGSVTGPT
                     DDRGCVVDHLGSENVESGRVAVRFMPSDTVEINVVADLTNIDQQGPADKYTIQLRTTD
                     GVPPTVQAGINSWNNNVALPVFGPGGQFDGRFQTDGEYTGYHRFGYDPLTRRTTPNVN
                     ELTHWGLQSTVDWDVTDNVSFKSTTSYREFDNSYGRDSDGTPIPQLFTWDTAKHEQFT
                     QEFQLNGLAGSMQRLEWTTGLFYYDAFDSNQGYVNTFTYTSNFSDHKDVQDLTNYAAY
                     AHFNYAITERLNLSGGVRYTDDEKVANIYRVTGNTAPPGIGLPQYVLIPNTEVVAESE
                     EWSPKISVDYKFTDTIMGYAQYSTGFRGGGFGPRPANSLQVAAFDPEYTDNFEIGVKS
                     DWLDSRLRFNGDIYYMETTDKQLATQTCAPCAPVVVAWFR"
     gene            2176..>2453
                     /locus_tag="VIQ99_02920"
     CDS             2176..>2453
                     /locus_tag="VIQ99_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020881063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY9182122.1"
                     /translation="MAYDLLGKNFAPPDIQAKVTGKAKYSEDFRVDGMVFCKVLTSPM
                     PHARVTSIDASAALAMPGVHGVLTADDVPSVPDPQETILTNEPLFVGAP"
BASE COUNT          394 a          774 c          824 g          461 t
ORIGIN      
        1 cggaaccacg cgacgacgac cggagcgcag ggcgcgcagg tctgggtcgc gagctgctta
       61 tcggtcgtct ccatgtagta gatgtcgccg ttgaaccgca gccggctgtc gagccagtcg
      121 ctcttgacgc cgatctcgaa gttgtcggtg tactcggggt cgaacgccgc gacttgcagc
      181 gagttcgcgg gccgcgggcc gaagccgccg ccgcggaacc cggtggagta ctgagcgtag
      241 cccatgatcg tgtcggtgaa cttgtagtcg acgctgatct tcggcgacca ctcctcggat
      301 tccgcgacga cttcggtgtt cgggatcagc acgtattgcg gcaggccgat tcccggcggc
      361 gccgtgttac ccgtgacgcg atagatattg gcgaccttct cgtcgtcggt gtagcgcacg
      421 ccgccggaca ggttcagcct ctccgtgatc gcgtagttga agtgcgcata cgccgcgtag
      481 ttcgtgaggt cttgcacgtc cttgtgatcg gagaagttcg acgtgtacgt gaacgtgttc
      541 acgtaccctt ggttcgaatc gaacgcgtcg tagtagaaca gtcccgtcgt ccactcgagg
      601 cgctgcatgc tcccggccag gccgttgagc tggaactcct gagtgaactg ctcgtgcttg
      661 gccgtatccc acgtgaagag ctgcggtatc ggcgtgccgt cggagtcgcg gccgtaggag
      721 ttgtcgaact cacggtacga cgtcgtcgac ttgaagctca cgttgtcggt gacgtcccag
      781 tccaccgtgc tctgcaggcc ccaatgcgtg agctcattga cgttcggcgt cgtgcggcgc
      841 gtcaacgggt cgtagccgaa gcggtgatag cccgtgtact cgccgtcggt ctgaaaacgg
      901 ccatcgaact ggccgccggg gccgaagacg gggagcgcaa cgttgttgtt ccagctgttg
      961 atgcccgcct gcacggtcgg cggcacacca tcggtcgtgc gcagctggat cgtgtatttg
     1021 tcggccggcc cctgctggtc gatgttcgtg aggtccgcga ccacgttgat ctcgacggta
     1081 tcggacggca tgaagcgcac ggcgacgcgg cccgactcga cgttctcgct gcccaggtgg
     1141 tcgacgacgc agccgcgatc gtcggtcggc cccgtgacgc tgccgagcgc gatgccgccg
     1201 atcgcgggat gcgtcgtgat cgcggtcgtg agctccgacg tcgtgttgaa cacgccggcc
     1261 gtgatgcccg cgccgccgaa gccgagcgta ccggccccgt tcacgcattc gtaatccaaa
     1321 atatcgaagt acccgtcctg ggtcttcgcg gatgccgaca cgcgcgcgta cacggtgtcc
     1381 gacagcgcga agtcgtagga gccgcggatg ttcagccggt cacgtgagcc ggcaccgacg
     1441 tcgaggaagc ccgagccgtc gccatccggt ttgcgcgaga cgatgcgcac ggcgccgccg
     1501 agcgtgttct tgccgaacaa cgtgccttgc gggccgcgca ggacttcgac ccgctcgacg
     1561 tcgagcaggt ccatgaccgc gccctgtggg cggccgtgat agacgtcgtc gatgtagatc
     1621 ggcacgccgg gctcgaacga cagcgagttg tcgccgaggc cgatgccgcg gatgaacgcc
     1681 gctgcggtcg agccccaacc ggcgccgagc ggtgcgatga ccgtgttcgg cacgaacgcg
     1741 tcgaggtcga gcgtgctcgt cgcgccgcgc gcttcgagca gcgtgcccgt gacggccgtg
     1801 atcgcgagcg gggtctcttg caaattctct tcgcggaaac gcgccgtgac gacgatctcc
     1861 tcgagcgcct cctgcgccat gagggccgca ggcagcacgg tcgagccgag cgccgtcgcg
     1921 atggccagtg gcaatagatg tcgttgcggg atacgcgctc gcggagcgcc gctcgtggtc
     1981 cggtcgttca tggtcccccc ttgttcaccg gtaggtttaa tagcggtgcc gagactaaca
     2041 gcaattcgtt accgcgggca ggccctttgt tttcagtgag ttccggtcga attcagtcgc
     2101 cgacagccgc acgctggcgt ctcggagtat gatttcggct gcgactgcga attcgctttc
     2161 atccgggggg acctcatggc ctacgacttg ctcggcaaga atttcgcgcc gcccgacatc
     2221 caggcgaagg tgacgggcaa agccaaatac tcggaagact tccgcgtcga cggcatggtc
     2281 ttctgcaagg tgctcacgag cccgatgccg cacgcgcgcg tcacgagcat cgatgcgagc
     2341 gcggcgctcg cgatgcccgg cgtgcacggc gtgctgacgg ccgacgacgt gccaagcgtc
     2401 cccgatccgc aggaaacgat cctgacgaac gaaccgttgt ttgtcggtgc gcc
//
LOCUS       DATCUD010000205         3779 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_51834, whole genome shotgun sequence.
ACCESSION   DATCUD010000205 DATCUD010000000
VERSION     DATCUD010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3779
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51834"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..2783
                     /gene="glnD"
                     /locus_tag="VIQ99_02925"
     CDS             111..2783
                     /gene="glnD"
                     /locus_tag="VIQ99_02925"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:TIGR01693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEY9182123.1"
                     /translation="MASDRGEQSDASSAPLIDRAALERALRGDVKAVKAFREALKAAG
                     DRLGERFRRNEPIEQLVAARAHVVDEVILASWVHLSAGALDAADLVAVGGYGRGELHP
                     QSDIDLLILLESPSNKTDDAVGRFLTFLWDIGLEVGHSVRTIDDCEAQARADVTVLTT
                     LMETRLLHGPGRLFAQLPVRIGTDRMWNSAEFFHAKLEEQRARHARYHDTAYNLEPNV
                     KGSPGGLRDIQMIGWLAQRHLGARTLADLVAHNFLTEGQLRILTAGRGFLWRIRFGLH
                     LLTGRREDRLLFDHQVKLAQMLGYEDASFTLAVEQLMQRYYRTVMEISRLNEMLLQLF
                     EEAILLDKNAPPVPLGPRFQSRNGYLEVSDDRVFARDPSALLEMFLLLEQNLDLRGVN
                     ARTIALVKQHLWLIDEEFRQNPRHHRLFLDILRAPQGVTRTLKRMNTYGVLGLYIPAF
                     GRVVGRMQYDLFHAYTVDAHTLFVVENLRRFSLPRFDNEFPQCSTVMQRLEKPEVAYL
                     AGLFHDIAKGRGGDHSELGAVDAEAFCLEHGMSRYDARLVAWLVQHHLLLSLTAQKRD
                     LNDPKVVNEFAKKVGDQTHLDYLYVLTVADVRGTNPKIWNSWKDSLFSELYQSTRRAL
                     RRGVSNPIDKDEFIAGRLGQAEQLLTHAGLARPSYQQIWTGFTEEYFLRHRPEEIAWH
                     TRVLAESGSPGTITVDVNDVVVPGLTSIAVYSPEETRSFVRATAVLDELGLTIVDARI
                     VPLPKSSLDTYCVLESDGSTISERRRLDEIKHRLLKALTTGNENALKVTRRAPRQVRM
                     FSTPVQVAISQDGANARTIVEIVVGDRPGLLFQIAKIFDQQQVALQNAKIMTVGERAE
                     DVFFVTSLAHQPLDDASSERLGKALREGLAESPT"
     gene            2806..3630
                     /gene="dapD"
                     /locus_tag="VIQ99_02930"
     CDS             2806..3630
                     /gene="dapD"
                     /locus_tag="VIQ99_02930"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018346525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEY9182124.1"
                     /translation="MSTLNEIIEQGWERRTELSPTRADPELRAAVEECLAGLDAGRLR
                     VAEQRDGRWIVNQWLKQAVLLSFRLSDNRVVEGGHTRFFDKVPLKYAQHDEAQFRRGG
                     ARVVPDAVVRRGAYIAPDVVLMPSFVNIGAYVDQGTMIDTWATVGSCAQIGKHVHLSG
                     GAGIGGVLEPLQASPTIIEDNCFIGARSEVVEGVVVERGSVLGMGVYIGQSTRIYDRE
                     TGEIHYGRVPAGSVVVAGNLPSKDGKYSLYCAVIVKKVDEKTRAKTSLNELLRAAD"
BASE COUNT          665 a         1251 c         1257 g          606 t
ORIGIN      
        1 cgtcgtgacg aaagatcatt ccctgtccgc gcaatgggag aacacgatcc tcgtcacaga
       61 gacgggatac gaagtgctga ccctgggcgc cggcgatcgt ggcggctgac gtggcaagcg
      121 atcgcggaga acagtcggac gcgtcgtccg cacccctgat cgatcgcgcc gcgctcgagc
      181 gcgcgctgcg tggcgacgtc aaagccgtca aggcgttccg cgaagcactg aaggccgccg
      241 gcgatcggct cggcgaacgc ttccgccgca acgaaccgat cgagcagctc gtcgccgcgc
      301 gtgcccatgt cgtcgacgag gtcatccttg cgagctgggt ccacctctcg gccggcgcgc
      361 tcgatgcggc ggatctggtg gccgtcggcg gctacggccg cggcgagctg catccacagt
      421 ccgatatcga tctcttgatc ctgctcgaga gcccgtcgaa caagaccgac gacgcggtcg
      481 gacggtttct cacgtttctg tgggacatcg ggctcgaggt cggtcatagc gtcaggacga
      541 tcgacgactg cgaagcgcag gcgcgcgccg acgtgaccgt gctcacgacg ttgatggaga
      601 cgcgcctgct gcatggaccc ggccggttgt tcgcgcagct gcccgtgcgg atcggcacgg
      661 accggatgtg gaacagcgcc gagttcttcc acgcgaagct cgaagagcag cgcgcgcgcc
      721 acgcgcgcta ccacgacacg gcttacaacc tcgagccgaa cgtgaagggt agccccggcg
      781 ggctccgcga cattcaaatg atcggctggc tcgcgcagcg gcacttgggc gcccgcacgc
      841 tcgcggacct ggtcgcgcac aacttcctga ccgagggaca gctgcggata ctgaccgcgg
      901 gccgtgggtt cttgtggcga atccgtttcg ggctgcacct gctgaccggg cgccgcgagg
      961 accgcctgct gttcgatcat caggtcaagc tcgcgcagat gctcggctac gaggacgcga
     1021 gcttcacgtt ggccgtcgag cagctgatgc agcgctacta ccgcacggtc atggagatca
     1081 gccgtctcaa cgagatgctg ctccagctgt tcgaggaagc aattctgctc gacaagaacg
     1141 ctccgcccgt gccgctcggc ccgcgtttcc agagccgcaa cggctacctc gaggtcagcg
     1201 acgaccgagt gttcgcgcgg gatccgtccg cgctgctcga gatgttcctg ctgctcgagc
     1261 agaacctcga tttgcgcggc gtcaacgcgc gcacgattgc gctcgtgaag cagcatctgt
     1321 ggctgatcga cgaggagttc cgccagaacc cgcgccacca tcggctgttc ctcgacatcc
     1381 tgcgagcgcc gcaaggcgtc acgcgcacgt tgaagcgaat gaacacctac ggcgtgttgg
     1441 ggctttacat tcccgcgttc ggccgcgtgg tcggacgaat gcagtacgac ttgttccacg
     1501 cctacacggt cgatgcgcac acgctgttcg tcgtcgagaa cttgcggcgc ttctcgttgc
     1561 cgcgtttcga caacgagttc ccgcagtgca gcaccgtcat gcagcggctc gagaagccgg
     1621 aggttgcgta tctcgcgggc ctgtttcacg acatcgccaa aggccgcggc ggcgaccact
     1681 ccgagctcgg cgccgtcgac gccgaggcgt tctgcctcga gcacggcatg agccgttacg
     1741 acgcgcgcct cgtcgcgtgg ctcgtccaac accacctgct gctgtcgctg acggcccaga
     1801 agagggactt gaacgatccc aaggtcgtca acgaattcgc gaaaaaggtc ggcgatcaaa
     1861 cgcacctcga ctacctgtac gtcctgaccg tggccgacgt gcgcggcacc aacccgaaga
     1921 tctggaattc ctggaaggac tcgctgtttt cagagctgta tcaatcgaca cggcgcgcgt
     1981 tgcgccgcgg cgtgtcgaat ccgatcgaca aggacgagtt catcgcgggc cggctcgggc
     2041 aggccgagca gctgttgacg cacgcggggc tcgcgcgccc gagctatcag caaatctgga
     2101 cgggcttcac cgaagaatac ttcctgcggc accggccaga agagatcgcg tggcacacgc
     2161 gcgtgctcgc cgaaagcggc agcccgggca ccatcaccgt cgacgtcaac gacgtcgtcg
     2221 tgccgggact cacgtcgatc gcagtctatt cgcccgagga gacccgctcg ttcgtgcgcg
     2281 cgacggccgt gctcgacgag ctgggcttga cgatcgtcga cgcgcggatc gtgccgctcc
     2341 cgaaatcgag tctcgacacc tattgcgtgc tcgagagcga cggcagcacg atcagcgagc
     2401 ggcgccggct cgacgagata aagcaccgct tgttgaaggc gctgacgacc ggcaacgaga
     2461 acgcgctgaa ggtcacgcgg cgcgcgccgc gccaagtgcg gatgttctcg acaccggtcc
     2521 aggtcgcgat ctcgcaggac ggcgcgaacg cacgcacaat cgtcgagatc gtcgtgggcg
     2581 accgccccgg cctgttgttc cagatcgcca agatcttcga tcagcagcag gtggcgctcc
     2641 agaacgccaa gatcatgacc gtcggcgagc gcgccgagga cgtcttcttc gtcacgagct
     2701 tggcgcacca gcccctcgac gacgctagct cggagcgcct cggcaaggcg cttcgcgagg
     2761 gcctcgccga gtcaccgacc tgagattgct gcgaggaccg cgaccgtgag cacactgaac
     2821 gaaatcatcg agcagggctg ggagcgacgc acggagctct cgcccacgcg cgcggacccc
     2881 gagctgcgcg cggccgtcga ggaatgcttg gccgggctcg acgcgggccg cctccgcgtc
     2941 gccgagcagc gcgacggccg ttggatcgtg aaccaatggt tgaagcaagc cgtgctgttg
     3001 tcgtttcgct tgagcgacaa ccgcgtcgtc gagggggggc acacgcgctt cttcgacaag
     3061 gtgccgctga agtacgcgca gcacgacgaa gcgcaattcc gccgcggcgg cgcgcgcgtg
     3121 gtgcccgacg cggtcgtgcg ccgcggcgcg tacatcgcgc ccgacgtggt gctgatgccg
     3181 tcgttcgtga acatcggcgc ctacgtcgac caaggcacga tgatcgacac gtgggccacg
     3241 gtcggcagct gtgcgcagat aggcaagcac gtgcatctct cgggcggtgc cggcatcggc
     3301 ggcgtgctcg agccgttgca ggcgtcgccg acgatcatcg aggacaactg tttcatcggc
     3361 gcgcggtccg aggtcgtcga gggtgtcgtc gtcgagcgcg gcagcgtgct cggcatgggc
     3421 gtctacatcg gccagagcac gcggatctac gaccgcgaga ccggcgagat ccactacggc
     3481 cgcgtgcccg cgggctccgt cgtcgtcgcc ggcaacttgc cgtcgaagga cggcaagtac
     3541 tcgctgtact gcgccgtgat cgtgaagaaa gtcgacgaga agacgcgcgc gaagacttcg
     3601 ctgaacgagc tcttgcgcgc cgcggactga tccgccgccc ggcgttcagc cggatgcgcg
     3661 gtcgcgcgca cgagccacgt gaacggcacg agcactggcg gacaccgcct ccccaaggca
     3721 ttgccgacag gctaacctag cgacggggtg cccatcgcga ggatgcgcgc tcgttcggg
//
LOCUS       DATCUD010000206         1814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23480, whole genome shotgun sequence.
ACCESSION   DATCUD010000206 DATCUD010000000
VERSION     DATCUD010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23480"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(148..1305)
                     /locus_tag="VIQ99_02935"
     CDS             complement(148..1305)
                     /locus_tag="VIQ99_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007229357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY9182125.1"
                     /translation="MKTSTSKILTTHVGSLPRGTGVVDLLYQKENGQPYDQPELDAAI
                     AAGVADAVAKQVSVGIDVVSDGETSKVGYATYIKDRLSGFAGHHPRPPHLDLAPYPEF
                     REAMARMMGKQAFKRAACVGPIALVDAEACRKDIVNFKAALATHGAADAFMNAASPGV
                     ISAFQSNRYYPTHEAYVDAIVTAMKPEYDAIVRAGFVLQLDCPDLAMARHTGFQELSE
                     ADFLRRAEYQVEALNHAVRDIPAERMRMHICWGNYEGPHDHDIELEKIIAIVLKAKPA
                     GILFEAANPRHRHEWAVWRDAKLPDDKVLIPGCISSTSNYVEHPRLIAEQLCQYADIV
                     GRERVMAGTDCGFGSFAGYSRVDPAIAYKKLGALVEGAARASDALWGGRSR"
     gene            1484..>1814
                     /locus_tag="VIQ99_02940"
     CDS             1484..>1814
                     /locus_tag="VIQ99_02940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182126.1"
                     /translation="MRGSSGPTPAYTRSSRGGDGITSYESLVEEREPIDGWTICTVCL
                     NLDRSSAVKHKRWRCADCGVDTSNGTQRELKDYLTENSAEKIASNLEQWNNVKGVRAA
                     YKMLRSAR"
BASE COUNT          321 a          577 c          598 g          318 t
ORIGIN      
        1 gcaaaaggtt gacgatcgat tgaacgttga tcgccagaag cacagagagc gcgatcagcg
       61 cggccttgcg ttggtctgat tgctgcgcat aacgcattcg aaaatgcgtc atcatcgaat
      121 cgtgaagttt gccgagactc agcagcatca ccgggagcgt ccgccccaca gcgcgtcgct
      181 cgcgcgtgcc gcgccctcga cgagcgcacc gagcttcttg tacgcgatcg cggggtcgac
      241 gcgactgtag cccgcgaacg agccgaagcc gcagtcggtg ccggccatca cacgctcgcg
      301 gcccacgata tccgcgtact gacagagctg ctctgcgatc agccgcggat gctccacgta
      361 gttcgacgtc gacgagatac agcccggaat caggaccttg tcgtccggta gcttcgcgtc
      421 acgccacacg gcccactcgt ggcggtggcg cgggttcgcg gcctcgaaca ggatgcccgc
      481 gggtttcgcc ttcaacacga tcgcgatgat tttctcgagc tcgatgtcgt ggtcgtgcgg
      541 gccctcgtag ttgccccagc agatgtgcat gcgcattcgc tctgcaggta tgtcgcgcac
      601 ggcgtggttc agcgcttcga cttgatactc ggcgcggcgc aagaaatccg cttcgctgag
      661 ctcttggaaa cccgtgtggc gtgccatcgc gagatcgggg caatcgagct gcaagacgaa
      721 gcccgcgcgc acgatcgcgt cgtattccgg cttcatcgcc gtcacgatcg cgtcgacgta
      781 cgcttcgtgc gtcggatagt agcgattcga ttggaacgcc gagatcacgc ccggtgacgc
      841 cgcattcatg aacgcgtcgg ccgcgccatg cgtggcgagc gcagccttga agttcacgat
      901 gtccttgcgg cacgcctcgg cgtcgacgag cgcgatcggg ccgacgcagg ccgcgcgctt
      961 gaacgcctgc ttgcccatca tgcgcgccat cgcctcgcgg aactcggggt acggcgccaa
     1021 atcgagatgc ggcgggcgcg gatgatgacc tgcaaagccc gagagccggt ccttgatgta
     1081 ggtcgcgtag cccaccttgc tggtctcgcc gtcgctgacg acgtcgatgc cgaccgagac
     1141 ctgtttcgcg acggcgtcag cgacgccggc cgcaatcgcg gcgtcgagct cgggctggtc
     1201 gtacggctgg ccgttctcct tctggtagag aaggtccacg acgccggtac cccgcggcag
     1261 gctgccgacg tgtgtcgtga ggatcttgct cgtgctcgtt ttcatcggtg acacgtcgcc
     1321 gtctggctcg agcagcggcg ccgcaaactg taacgccgcc ggagcggccc tgcacgccga
     1381 attgacggcc cgccgagcag cgtggtctag tgcgggaaac cagaggcgca gcggccgggg
     1441 aggaagtctg ctcaacgcga tcgtacaagc catcgtcgac ttcgtgcgcg gttcgtcggg
     1501 gccgacgccg gcctacacgc gctcgtcgcg cggcggcgac gggatcacga gctacgaatc
     1561 gctggtcgag gagcgcgaac cgatcgacgg ctggaccatc tgcaccgtgt gcttgaacct
     1621 cgaccgtagc tcggcggtga agcacaagcg ttggcgatgc gcggactgcg gcgtcgacac
     1681 gagcaacggg acgcagcgcg agctcaagga ttacctgacg gaaaattcgg ccgagaaaat
     1741 cgcgagcaat ctcgagcagt ggaacaatgt caaaggcgtg cgcgccgcgt acaagatgct
     1801 gcgttcggct cgct
//
LOCUS       DATCUD010000207         1842 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94446, whole genome shotgun sequence.
ACCESSION   DATCUD010000207 DATCUD010000000
VERSION     DATCUD010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1842)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1842)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1842
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94446"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..574)
                     /locus_tag="VIQ99_02945"
     CDS             complement(<1..574)
                     /locus_tag="VIQ99_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HEY9182127.1"
                     /translation="MRTSTRVWATGFLMAGIGAGAHAQEPEMSFFVTSSGLGNGGNLG
                     GIKGADAHCQALARSAGAGAKTWRAYLSVTDLNGKGAINARDRIGRGPWYNANGVRIA
                     IDVDDLHSDSANITADTAITEKGAKLPAEPNQHDILTGSTREGRAFSYNLLDDLNLER
                     GAMTCSNYTSNAEGQFVMVGHYDRAGTAPIS"
     gene            662..1687
                     /locus_tag="VIQ99_02950"
     CDS             662..1687
                     /locus_tag="VIQ99_02950"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9182128.1"
                     /translation="MKRSVWFLAVLGCVLSFAIHAQPGPLWQSTSYKGQEIGKLTGDV
                     YYARTDDYVSAFMVTSAGIVLVEPVGPEHAAWLKGELDRRFGVPVKYVIYSHSHGDHA
                     SGAAVFADTARIIGHEALLGLLAMPPASTPLPQNLRTQDANGNGRIERGEAQAQIAAA
                     FDFYDADGDGVLSGAEATRGSLKGVTPPDLTYTTQVNITLGGKRVEVIPIPTDHAPDN
                     TVVRFVDGTNVVFASDWITNGRVPFGPNVTMPSELAKIRQVEALDFEHFVCSHGRLGT
                     KADVTANLRYREAVVEAVREAIAAGKTLEQTRDTVLMSDYVNWEFYEQQRPQNVTGAY
                     RLLSAGR"
BASE COUNT          323 a          588 c          589 g          342 t
ORIGIN      
        1 gcgagatcgg cgcggtgcct gcgcgatcgt agtggccgac catgacgaac tgaccttcgg
       61 cattgctcgt gtaattgctg cacgtcatcg cgccgcgctc gaggttcagg tcgtcgagca
      121 ggttgtagct gaaggcccgg ccttcgcgcg tggagcccgt cagtatgtcg tgctggttcg
      181 gctcggccgg tagcttcgct cctttctcgg taatcgctgt gtcggcggtg atgttcgcgc
      241 tgtcggaatg caagtcgtcg acgtcgattg cgatacgaac gccgttcgcg ttgtaccaag
      301 gcccgcggcc gatgcggtcg cgggcgttga tcgcgccctt gccgttcaag tccgtgacgc
      361 tgaggtacgc gcgccacgtt ttcgcaccgg cgccggcgct gcgcgcgagc gcctggcaat
      421 gagcgtcggc tcccttgata ccgccgagat tgccgccgtt gcccaacccg gagctcgtca
      481 cgaagaagga catctcgggt tcttgtgcgt gcgcgccggc cccaatgccg gccatcagaa
      541 agcccgtcgc ccagacacgc gtagatgttc tcattgttct ctccacggac cgtctctcat
      601 gcggtcaacg ccgatactag taatacgcta cgatcgaggt caacgaaccc tggagagtgc
      661 aatgaagcgt agcgtgtggt tcctggcggt attgggttgc gtgctgtcgt ttgccatcca
      721 cgcgcaaccg ggcccgctgt ggcaatcgac gtcgtacaag ggacaggaga tcggcaagct
      781 cacgggcgac gtgtactacg cccgcaccga tgactacgtc tcggcgttca tggtcacctc
      841 cgcaggcatc gtgctcgtcg agccggtcgg tcccgagcac gcggcgtggc tcaagggcga
      901 gctcgaccgg cgcttcggcg tgcccgtgaa gtacgtgatc tacagccact cgcacggcga
      961 ccacgcatcg ggtgctgcgg tgtttgcgga caccgcgcgc atcatcggcc acgaggcttt
     1021 gctcggattg ctcgcgatgc cgcccgcatc gacgccgctg ccgcagaacc tgcgtacgca
     1081 agacgcgaac ggcaacggcc gaatcgagcg tggcgaggcg caagcgcaaa tcgctgcggc
     1141 gttcgacttc tatgacgccg acggcgacgg tgtattgagc ggcgcggaag cgactcgcgg
     1201 ctcgttgaag ggggtcacgc cgcccgatct cacctacacg acgcaggtca acatcacgct
     1261 cggcggcaag cgcgtggaag tcattccgat cccgaccgat catgcgcccg acaacaccgt
     1321 cgttcgattc gtcgacggca cgaacgtcgt gttcgcatcc gactggatca cgaacggccg
     1381 cgtaccgttc gggccgaacg tcacgatgcc cagcgagctc gcgaagattc gtcaggtcga
     1441 agccttggac ttcgagcatt tcgtctgtag ccacggtcgc ctcggcacga aggcggatgt
     1501 gaccgcgaac ctccgctatc gcgaggccgt cgtcgaggca gttcgcgagg ccatcgccgc
     1561 gggcaagacg ctcgagcaaa cacgcgatac ggtgctgatg agtgattacg tgaactggga
     1621 gttctacgag cagcagcggc cgcagaacgt gaccggcgcg tatcggctct tgtcggccgg
     1681 ccgctgagcc tggtaccgtc tgagcgacct agccacgaac catggagtct cgatatgcga
     1741 atgtcgagaa tcgcagcggc cttggtcctc acgaccaccg tgccgctgtt gccgaacgct
     1801 gacgcacagt tcgccggcat ctacaacttg ccgcaaaacg ac
//
LOCUS       DATCUD010000208         3207 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_51849, whole genome shotgun sequence.
ACCESSION   DATCUD010000208 DATCUD010000000
VERSION     DATCUD010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3207
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51849"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIQ99_02955"
     CDS             complement(<1..280)
                     /locus_tag="VIQ99_02955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007149749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9182129.1"
                     /translation="MPERVRKALVLPGAGARGAYQVGVLKAVARLLPENAPNPFSVIC
                     GTSAGAINAAVLAGRAGNFERAVADMEQVWGNFSADQVYRTDNWTMLKT"
     gene            complement(273..1745)
                     /gene="pyk"
                     /locus_tag="VIQ99_02960"
     CDS             complement(273..1745)
                     /gene="pyk"
                     /locus_tag="VIQ99_02960"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006474818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEY9182130.1"
                     /translation="MPDAAREDVRRRTKIVATLGPATDDAAVMEQLILAGTDVFRVNF
                     SHGTAADQAARVARVRQVEAKVGRHIGIMGDLQGPKIRIESFKAGTVVLVEGREFVLD
                     VAMDPDSGDEHAVGCAYRNLPNDVGAGDTLLLDDGLIVLEVERVAGTRIQCRVKQGGR
                     LTDHKGLNKQGGGLSAPALTDKDRRDIESAAKLKLDFMSVSFARNAEDIEEARSLLRK
                     AGGHGHIVAKIERAEAVTNIRSIIDASDVIMVARGDLAVEVGYASMTGLQKGLIRLAR
                     ARNKVCITATQMLESMINSPSPTRAEVSDVANAVMDGTDAVMLSAETAVGKYPVRAVR
                     TMAELCIGAEKHETFRRAANYRLEDVFTHVDEAIAMAVMYVANHLDVSAIVALTESGS
                     TPLWMSRVRTDIPIFAFTRHEATLRRVSMYRGVYAVAFEEPGADTATIHQRIFESLTQ
                     TGSVRPGDLVLVTMGQHGVAGRTNSMQIVTVPGTPAPASA"
     gene            complement(1769..3046)
                     /locus_tag="VIQ99_02965"
     CDS             complement(1769..3046)
                     /locus_tag="VIQ99_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014996524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4147 domain-containing protein"
                     /protein_id="HEY9182131.1"
                     /translation="MPPKPSAERALLEQAFDHASRAAAPAVCLPTALRNLKRRPALVL
                     GTGKAAASMAAAFYAHWDAPVRGMVVTRYGHGLKPGESCGAIEVIEAGHPSPDAASLE
                     AGARLLDLATKLGPDETLICLISGGGSSLASQPLALLSFEQKRAAANFLIRQGADIRE
                     INCVRKHLSRLKGGRLAVAAHPHPVATFAISDVPGDDVGAIASGPTVPDPTTQADALG
                     ILEKYRYPALRELVPILRDPLWETPKPGDPAFAGDSVHLIATAATALAAASRLLAERG
                     YDVFTLGDDLDDEAQALGREHARLAKERQKSGRPTAILSGGETRVVLGDSGGRGGRNT
                     EYLAALALELDGAPGIFALAADTAGIDGHGDHAGGIVVPELLELGRARGLSLAKLLAR
                     HDSYSYFDACGLLLKTGPTRTNVNDFRLILCQP"
     gene            complement(3049..>3207)
                     /gene="pgk"
                     /locus_tag="VIQ99_02970"
     CDS             complement(3049..>3207)
                     /gene="pgk"
                     /locus_tag="VIQ99_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017942864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY9182132.1"
                     /translation="IAGGGDTLAAIEQFGIGDRISYISTGGGAFLEFLEGKTLPAVAT
                     LERRAAGA"
BASE COUNT          505 a         1105 c         1072 g          525 t
ORIGIN      
        1 tcgtcttcag catcgtccag ttgtccgtgc gatagacctg gtcggccgag aagttgcccc
       61 agacctgctc catgtcggcg accgcgcgct cgaagttccc ggcacgcccc gcgagcacgg
      121 ccgcgttgat cgcgccggcc gacgtgccgc agatcacgct gaacggattc ggggcattct
      181 cgggcaagag gcgcgctacg gccttcaaga caccgacttg gtatgcgccg cgagcgccgg
      241 cgcccggcag cacgagcgcc ttgcgtacgc gctcaggcac tcgctggcgc cggagtcccc
      301 ggcacggtca cgatctgcat cgagttcgtc cggccggcta cgccgtgttg acccatcgtg
      361 accagtacga gatcgccggg cctcacggaa cctgtctgcg tcagcgactc gaagatacgt
      421 tgatgaatcg tggccgtgtc cgcgcccggc tcctcgaacg cgacggcata gacgccgcga
      481 tacatgctca cgcggcgcag cgtggcttca tgacgagtga atgcgaatat cggaatgtcg
      541 gtgcgcacgc gcgacatcca cagcggcgtc gatccggact cggtcagcgc gacgattgcg
      601 ctcacgtcga ggtggttggc gacgtacatc acggccatcg cgatcgcctc gtcgacgtgc
      661 gtgaacacgt cctccaggcg atagttcgcg gcgcgccgga acgtctcgtg cttctcggcg
      721 ccgatacaca gctccgccat cgtgcgcacg gcgcggaccg gatacttgcc gaccgcggtt
      781 tcggccgaca gcatgaccgc gtcggttcca tccatcacgg cgttcgcgac gtccgatacc
      841 tcggcgcgcg tcggcgacgg cgagttgatc atcgactcca gcatctgcgt ggcggtgatg
      901 cacaccttgt tgcgggcgcg cgcgagccgg atcagccctt tctgcaatcc ggtcatcgac
      961 gcgtagccga cctcgacggc gagatcgccg cgcgccacca tgatcacgtc gctggcatcg
     1021 atgatcgaac ggatgttcgt gacggcttcc gcgcgctcga tcttggccac gatgtgcccg
     1081 tggccgccgg ccttgcgcaa cagcgagcgc gcttcctcga tgtcctcggc attgcgcgcg
     1141 aacgacaccg acatgaagtc gagcttcagc ttggccgccg actcgatgtc gcgccggtcc
     1201 ttgtccgtga gcgccggcgc ggacagtccg ccgccttgct tgttcaaacc tttgtgatcg
     1261 gtgagccgcc cgccctgctt cacacggcac tggatccgcg tacctgcgac acgctcgacc
     1321 tcgagcacga tcaagccgtc gtcgagcagc aaagtgtcgc cggcgccgac gtcgttcggc
     1381 aggttgcgat acgcgcagcc gaccgcgtgc tcgtcgccac tgtccgggtc catcgcgacg
     1441 tcgagaacga actcgcggcc ctcgacgagg acgaccgtgc cggccttgaa cgattcgatg
     1501 cggatcttcg ggccctgcag gtcgcccatg atgccgatgt ggcgcccgac cttcgcctcg
     1561 acttgccgca cgcgcgccac gcgcgcggcc tggtcggcgg cggtcccgtg cgaaaagttc
     1621 acgcgaaaca cgtcggtgcc cgcgagtatc agctgttcca tgacggccgc atcgtcggtg
     1681 gctgggccca gtgttgcgac gatcttggtg cgacgccgca catcttcgcg cgcagcatcg
     1741 ggcatcagaa cggaatcgga ggagcgagtt agggttggca aagtattagt ctgaagtcgt
     1801 tgacgttggt acgggtcggt cctgtcttca atagcaggcc gcaggcgtca aagtaactgt
     1861 aactgtcatg acgcgccagt agcttagcga gcgataaacc gcgcgcgcgg ccgagctcga
     1921 gcagctccgg aacgacgatg ccgccggcgt gatcgccgtg accgtcgatg ccggcggtgt
     1981 cggccgcgag cgcgaaaatg ccgggcgcgc catcgagctc cagagcgaga gccgccagat
     2041 actccgtgtt gcggcctccg cgaccgccgc tgtcgccgag cacgacgcgc gtttcgccgc
     2101 cggacaggat cgccgtcggt cggccgctct tctgccgctc cttggcgagg cgcgcgtgct
     2161 cgcggccgag tgcttgcgcc tcgtcgtcga ggtcgtcgcc gagcgtaaac acgtcgtagc
     2221 ctctctccgc cagcaaccgc gaggcggccg cgagcgccgt agccgcggtc gcgatcaggt
     2281 gcaccgaatc accggcgaac gccgggtcac cgggcttcgg cgtctcccag aggggatcgc
     2341 ggaggatcgg cacgagctcg cgcaacgcgg gataacggta cttctccaaa attccgagcg
     2401 cgtcggcctg cgtggtcgga tcgggcacgg tcggccccga cgcaatcgcg ccgacgtcgt
     2461 cgccgggcac gtcggagatc gcgaacgtcg cgacgggatg cggatgcgcg gcgaccgcga
     2521 gccgcccgcc cttgagacgc gataggtgct tccgcacgca attgatctcg cggatgtcgg
     2581 cgccctggcg gatcaagaag ttcgcggccg cccgcttttg ctcgaacgag agtagagcaa
     2641 gcggttgcga cgccagcgac gagccgccgc ccgagatcag gcagatcagc gtctcgtcgg
     2701 gcccgagctt cgttgcgaga tcgagcagcc gcgcgccggc ctcgagactc gcggcgtcgg
     2761 gcgacgggtg acccgcttcg atgacctcga tcgcgccgca gctctcgccg ggcttgagac
     2821 cgtgaccata gcgcgtcacg accatcccgc gcaccggcgc gtcccagtgc gcgtagaacg
     2881 cggcggccat cgatgccgcg gccttgcccg ttccgagcac gagtgcgggg cggcgcttga
     2941 gatttcgtag cgcggtcgga agacagacag cgggcgccgc cgcccgcgac gcgtggtcga
     3001 acgcctgctc gagcagcgct cgctcggccg atggcttcgg cggcacggtc aggctccggc
     3061 cgcgcgccgc tccaatgtcg cgacggcggg cagcgtcttg ccctccaaga actcgaggaa
     3121 cgccccgccg ccggtcgaga tgtacgagat ccggtcgccg atgccgaact gctcgatcgc
     3181 ggcgagcgtg tcgccgccgc cggcaat
//
LOCUS       DATCUD010000209         1728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101446, whole genome shotgun sequence.
ACCESSION   DATCUD010000209 DATCUD010000000
VERSION     DATCUD010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1728
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101446"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(101..871)
                     /locus_tag="VIQ99_02975"
     CDS             complement(101..871)
                     /locus_tag="VIQ99_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY9182133.1"
                     /translation="MRSSVSSLVAFVASFSFDSATQAQPANPTPFQQKVIAAMQGDIR
                     TPEERARDVNRLPAEILEFFRMRENMRVIEILPAGGWFTKILAPVLKDQGKLYVVHPE
                     GFYADAYRRIANLPGLEDVEEIGWGATAAGSAGPFGPSGHWDVEPVDLVLTFRNYHNF
                     SPADRATVNRSVFDALKSGGYYGIVDHTRRHNEPQSRQNGRRVDPVLVIKEVQETGFE
                     LVDFSSLYYRPNDALTLEVANPEVNDRTDRIALLFRKP"
     gene            958..>1728
                     /locus_tag="VIQ99_02980"
     CDS             958..>1728
                     /locus_tag="VIQ99_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182134.1"
                     /translation="MNTTIRCSPSVWAAALHALAVCVGGNAHAQSNPRAPEFTVDPAW
                     PTIPNGWVLGEVTSISVDRNDNIWVLHVPQSIPEDERANAAPPVLQFDGAGKLLTSWG
                     GPADGAAWLGREHGIFVDANDFVWIGGRAGWPRATTPGVSDDMIMKFTMAGELVMQIG
                     HSGQSTGNLDTENVHQATDVFVDTDANEVYAADGYGNKRVIVFDSETGKFKRMWGAFG
                     NPPPSTFGPNVPTPQPQTTPDGPPEFGLPHAIKVSRDGV"
BASE COUNT          287 a          554 c          601 g          286 t
ORIGIN      
        1 cggtcacccg ccgcgaagcc cgctcggacc ggcagcgcac ctagcgctga tgatgatcgt
       61 gtacccggcg ttggtctacg tgccggtcca ttggttgctg ctacggtttg cggaacagta
      121 gcgcgatgcg gtcggttcgg tcgttgacct cggggtttgc gacctcgagc gtcagcgcgt
      181 cgttcggccg gtagtacaag ctgctgaagt cgacgagctc gaagccagtc tcctggacct
      241 ctttgatcac gagcaccggg tcgacgcgcc gcccgttctg gcgactctgc ggctcgttgt
      301 gacggcgcgt gtggtcgacg atgccgtagt agccgccgga tttcagcgcg tcgaacacgg
      361 agcggttcac cgtggctcgg tcggccggcg agaagttgtg atagttgcgg aacgtcaaca
      421 cgaggtcgac gggctcgacg tcccaatggc ccgacgggcc gaaaggccca gcactgccgg
      481 cggccgtggc gccccagccg atctcctcga cgtcttcgag gcccgggagg ttggcgatgc
      541 gccgatacgc atcggcatag aacccttcgg ggtgcacgac gtacagcttg ccttggtcct
      601 tcagcaccgg cgccaggatc ttcgtgaacc agccgccggc cggcaggatc tcgatgacgc
      661 gcatgttctc gcgcatgcgg aagaattcca ggatctcggc cggcaaccgg ttcacgtcgc
      721 gcgcgcgctc ctcgggcgtg cggatgtcgc cctgcatcgc cgcgatgacc ttctgttgga
      781 acggcgtggg gttggcgggc tgcgcctgcg ttgcggaatc gaacgagaac gaggcgacga
      841 aggcaacgag cgagctcacg gacgagcgca tgatgggtct cctggtcatt cttccgcagc
      901 cgagtatatc gtcgcgcagg gggtttcgcg ggcgaacccg tcgtatcatc ggcaaccatg
      961 aacacgacga ttcgatgttc gccgtcggtg tgggcggcgg cgctgcacgc gctcgcggtg
     1021 tgcgtgggcg gcaacgccca cgcccaatcc aatccgcgcg ccccggagtt cacagtggat
     1081 ccggcgtggc ccacgatccc gaacggctgg gtgctcggtg aggtcacgtc gatctcggtc
     1141 gaccgcaacg acaacatctg ggtcctgcac gtgccgcagt cgatacccga ggacgagcgc
     1201 gcgaatgcgg cgccgccggt gctccagttc gacggcgccg gcaagctgct gacgagttgg
     1261 ggcggaccgg ccgacggcgc cgcatggctc ggacgcgagc acggaatctt cgtcgacgcg
     1321 aacgacttcg tctggatcgg cgggcgcgcc ggttggcccc gcgccaccac gccgggcgtc
     1381 agcgacgaca tgatcatgaa gttcacgatg gccggcgagc tcgtgatgca gatcggccac
     1441 agcgggcaga gcaccggcaa tctcgacacg gaaaacgtgc atcaggccac cgacgtgttc
     1501 gtcgacacgg acgcgaacga ggtctatgcg gccgacggct acggcaacaa gcgcgtgatc
     1561 gtgttcgact cggagaccgg gaagttcaag cggatgtggg gcgcgttcgg caacccgccg
     1621 ccgtcgacgt tcgggccgaa cgtgccgacg ccgcaaccgc agacgacgcc cgacggaccg
     1681 cccgagttcg gcttgccgca cgcgatcaag gtgtcacgcg atggcgtg
//
LOCUS       DATCUD010000210         1602 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73154, whole genome shotgun sequence.
ACCESSION   DATCUD010000210 DATCUD010000000
VERSION     DATCUD010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73154"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(240..821)
                     /gene="rsxA"
                     /locus_tag="VIQ99_02985"
     CDS             complement(240..821)
                     /gene="rsxA"
                     /locus_tag="VIQ99_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HEY9182135.1"
                     /translation="MGELLLIALAAALVNNFVLVQFLGVCPFFGGSQRIESAIGMGLA
                     TGVVLTIAAGLTQLVDRYLLRPFDAQYLRLLAFIVVIGVSLQLTNLLVQRFSPLLRRV
                     LGLYVPLVASNCAVLGVALLSSTASRSFVATLFYGAGTGLGFGLALVLFAGLRERLAA
                     ADVPHAFRGAAILFVTAGILSLAFMSFTGFARL"
     gene            complement(824..>1602)
                     /gene="metG"
                     /locus_tag="VIQ99_02990"
     CDS             complement(824..>1602)
                     /gene="metG"
                     /locus_tag="VIQ99_02990"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionine--tRNA ligase subunit beta"
                     /protein_id="HEY9182136.1"
                     /translation="YAEFAAAAEDLAADFEKLEYSRAVRKIMALADRANQYIDERKPW
                     LLAKDSAAGAEVVAVCTVGLNLFRALIVYLKPIVPALASRAEKLLGGTELCWQDAATP
                     LLGAPIAKFEALLTRVEPSAIESILAKPATNEATKVTSTTPAPNGATHSEIDLAQFQR
                     TELRVARIIEAAYVDGADKLLKLRLDVGTEERTVFSGIRSSYEPSALTNRLVVLVANL
                     APRKMRFGVSQGMVLAASGDEPGIFLLSPDSGAKPGMKVS"
BASE COUNT          301 a          525 c          541 g          235 t
ORIGIN      
        1 tcgccgaccg cgacgacggc ctctgccggc tgaccgcggt gttgacgcag cgccagcacg
       61 agcttcgacg gcacgagccc gcggtgaatc ggcgtggccg tcgacgcggc cttgctcgcc
      121 ggcagcagaa tgccgccgct caggtgcttc tcgaagacgt agtcaaccat ggtcaggggc
      181 ggggcaaggc tcggtcgaca cgagcgtgcg accggccggt attgtggcgc tgaacatctt
      241 cagagcctcg cgaatcccgt gaagctcatg aaggccagcg agaggattcc cgcggtcacg
      301 aacaggatcg ccgcgccgcg aaacgcatgc gggacatcgg cggcggcgag ccgctcgcgc
      361 aagcccgcga acaagacgag cgcgaggccg aagccgaggc ccgtgcctgc gccgtagaac
      421 agagtggcca cgaagctccg gctcgcggtc gagctcaata gcgcgacgcc gagcacggca
      481 cagttgctgg cgaccagcgg aacgtacagt cccagcacgc gtcgcagcag cggcgagaaa
      541 cgttgcacga gcaaattcgt cagctgcagc gacacgccga ttacgacgat gaacgccaag
      601 agacgcaggt actgcgcgtc gaacggccgc aacaggtagc ggtcgaccag ttgcgtgagg
      661 ccggccgcga tcgtcagcac gacaccggtc gcgagcccca taccgatcgc actctctatg
      721 cgttgcgatc cgccgaagaa cgggcagacc cccaggaact ggaccagcac gaagttgttg
      781 acgagcgcgg ccgcgagcgc gatcagcaac agctctccca tcgctagctg accttcatgc
      841 cgggcttggc gccggagtcg ggggagagta ggaagatgcc gggctcgtcg ccgctcgccg
      901 cgagcaccat gccttgcgac acgccgaagc gcatcttgcg cggtgcgagg ttcgccacga
      961 gcacgacgag ccggttcgtc aaggcagagg gctcgtacga gctgcggata cccgagaaca
     1021 cggtgcgttc ctcggtgccg acatcgagcc tgagcttcag caacttatcg gcgccgtcga
     1081 cgtatgcagc ttcgatgatg cgcgcgacgc gcagctcggt cctctggaac tgcgcgagat
     1141 cgatctcgga gtgtgtcgcg ccgttcggcg ccggggtcgt ggacgtcact ttcgtggcct
     1201 cgttggtggc aggcttggca agaatggatt cgatggcgga gggctcgacg cgcgtcagca
     1261 acgcctcgaa tttcgcgatc ggcgctccca gcaacggcgt cgcggcgtcc tgccagcata
     1321 gctcggtgcc gccgagcagc ttttcggcgc gcgacgcgag cgccggcacg atcggcttca
     1381 ggtaaacgat cagtgcgcgg aacaggttca agcccaccgt gcaaacggcc acgacctcgg
     1441 ccccggcggc cgagtccttc gccaggagcc agggcttgcg ctcgtcgatg tactgattcg
     1501 cgcgatcggc gagcgccatg atcttgcgca cggcgcgcga atactcgagc ttctcgaagt
     1561 ccgcggcaag atcctcggcc gcagcggcga actccgcata ca
//
LOCUS       DATCUD010000211         1971 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2248, whole genome shotgun sequence.
ACCESSION   DATCUD010000211 DATCUD010000000
VERSION     DATCUD010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2248"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..>1971)
                     /locus_tag="VIQ99_02995"
     CDS             complement(138..>1971)
                     /locus_tag="VIQ99_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HEY9182137.1"
                     /translation="NALLVTLSADPRAGLRAGFGDAGEAISNLRKVVSLPKPPGFVDP
                     ANPANLSPKRLEALKAAAAGEKPAEDAEKSEDASGGGGGDRDPRSPLLSFANTDLAFQ
                     GDVMVVGSYHGFNVYRLQGDGAPQLLSSVVCPGGQGDVSIVGDLLIMSVEQTRGRIDC
                     GLEGAPVDASPERFRGLRIFDISDLTRPKQVGQVQTCRGSHTHSVVANDARRIVVYNS
                     GTSRVREEEELAGCIGNVAGDTRTALFRIDVIEIPVADPSRARIVDSPAVFADPATGV
                     MAGLWRGGDHGDDTQETDETDQCHDITVFPTAGLAAGACSGNGIVFDIRDPLKPTRID
                     AVVDKGFAYWHSATFNNDGTKVVFTDEWGGGMRPRCRAHDPLDWGADALYDLVDGRLV
                     YRAHFKMPAPQVDEENCVAHNGSIIPVPGRDIMVQSWYQGGISVWDFTDSAAPVEIAF
                     FDRGPVDAEELVLAGYWSSYWYDGRIYATEIARGLDVFALEPSDLLSANEIAAAALAD
                     QGGRFNPQQQFPVAWPAEPVVARAYVDQLRRGSSVSTATLDDISAALDLTASQLAAGT
                     RDRDLAARLRSLARGLGAASGDAITTKRKNGLAESLTGLAARLQ"
BASE COUNT          297 a          705 c          667 g          302 t
ORIGIN      
        1 ggctcgtgcg cgtcgacggt ctcgtgcacc gctgggcgcg cgacgaggtc gacgccactg
       61 ccgaggcgtg gaaattcttc agcgagcagc ggatgccgtc gcacgcgcac tgatcgcggc
      121 gcccccgcgc aagtggctca ctgcagccgt gcggccagcc cggtcagcga ctcggcgagc
      181 ccgtttttcc gcttcgtcgt gatcgcatcg ccgctcgccg ccccaaggcc gcgggcgagc
      241 gagcgcaacc gagctgccag gtcgcgatcg cgagtcccgg ccgcgagctg cgaagcggtg
      301 aggtccagcg cggcggagat gtcatcgagc gtcgccgtgg acacgctgct cccgcgccgc
      361 aattgatcca cgtacgcgcg agccacgacc ggctccgcag gccacgcgac cgggaactgc
      421 tgctgcgggt tgaatcgtcc gccctgatcg gccaaggccg ccgcggcgat ctcgttcgcc
      481 gacagaagat cgctcggctc caacgcaaag acgtcgaggc cccgcgcaat ctccgtcgcg
      541 tagatgcgcc cgtcgtacca gtacgacgac cagtagcccg cgagcacgag ctcttcggcg
      601 tcgacgggcc cgcgatcgaa gaacgcgatc tcgaccggcg cggccgagtc cgtgaagtcc
      661 cacacggaga tgccgccttg gtaccagctc tggaccatga tgtcgcggcc cggcaccggg
      721 atgatcgagc cgttgtgcgc gacgcagttt tcctcgtcga cctgcggcgc gggcatcttg
      781 aagtgcgcgc gatagaccaa ccgcccgtcg accaagtcgt acaacgcgtc ggcgccccaa
      841 tcgagcgggt cgtgcgcgcg gcagcgcggc cgcatgccgc cgccccattc gtcggtgaac
      901 acgaccttcg tgccgtcgtt gttgaacgtt gccgagtgcc agtacgcgaa gcctttgtcg
      961 acgacggcgt cgattcgcgt cggcttcagc gggtcgcgga tgtcgaacac gatgccgttg
     1021 cccgagcacg cgcccgcggc gaggcccgcc gtcgggaaca ccgtgatgtc gtgacactgg
     1081 tcggtctcgt ccgtctcttg cgtgtcgtcg ccgtggtcgc cgccgcgcca gagcccggcc
     1141 atcacgccgg tcgcggggtc tgcgaacacc gcggggctgt cgacgatgcg cgcgcgcgac
     1201 gggtccgcaa ccggaatctc gatcacgtcg atccggaaca acgccgtgcg cgtgtcgccg
     1261 gcgacgttgc cgatgcaacc cgcgagctct tcctcttcgc gcacgcgcga cgtgccggag
     1321 ttgtagacga cgatcctgcg cgcgtcgttc gcgacgaccg agtgcgtgtg cgagccgcgg
     1381 cacgtttgca cctggcccac ctgcttcggc cgcgtgaggt cggagatgtc gaagatgcgc
     1441 aggccgcgga agcgctcggg gctcgcgtcc accggcgcgc cctcgagtcc gcagtcgatg
     1501 cggccgcgtg tctgctcgac ggacatgatc aagagatcgc cgacgatcga gacgtcgcct
     1561 tggccgcccg ggcagacgac cgacgacaag agctgcggtg ctccatcgcc ttgcagccga
     1621 tagacgttga agccgtgata gctgcccacg accatcacgt cgccctgaaa cgcgaggtcc
     1681 gtgttcgcga acgacagcag cggcgagcgc gggtcgcggt caccgccacc cccgcccgac
     1741 gcgtcttcgc tcttctcggc gtcttcggcc ggcttctcgc ccgccgccgc ggccttaagc
     1801 gcttcgagcc gcttcggcga caagttcgcg gggttcgcgg gatcgacgaa gcccggcggc
     1861 ttcggcaacg acacgacctt ccggagattc gagatcgcct cgccggcatc gccgaatccg
     1921 gcgcggaggc ccgcgcgcgg atccgcggac agcgtcacga gcagcgcgtt c
//
LOCUS       DATCUD010000212         1610 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_51901, whole genome shotgun sequence.
ACCESSION   DATCUD010000212 DATCUD010000000
VERSION     DATCUD010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1610)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1610)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1610
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51901"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VIQ99_03000"
     CDS             complement(<1..236)
                     /locus_tag="VIQ99_03000"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9182138.1"
                     /translation="MRPRQVSDEAILEAARACLLRDGPGVAIARIAEEVGISAPAVLK
                     RFGTKEQLVTRALLSEAPPNLSSGPDPGPLRPQLV"
     gene            418..>1610
                     /locus_tag="VIQ99_03005"
     CDS             418..>1610
                     /locus_tag="VIQ99_03005"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl/aryl-sulfatase"
                     /protein_id="HEY9182139.1"
                     /translation="MGCTTFAVATSLAQEQDTEGTRLLEARSAEFERAVIEVTDNVYT
                     AVGYGVSTITMIVGSGGVIFVDAGSEPADTAAALGELRKISTAPIVALIYTHGHNDHT
                     NGSPALAAEGPIPEVWAGPSFLAEDRAFETSGITFAGLRGARQAGVRLPPAKRINNGI
                     APAVYPSRATAGFGFNNGQPVVPNRFVGSEPERLVVAGVELELVANPGETDDQLYVWL
                     PQQQVIFAGDNFYKSWPNLYAIRGTPYRDVQTWADSVDRLLQKSPEHLVGGHTRPVLG
                     RVAVTEVLTGYRDAIRFLFDKTVEGINRGLTPDQLVDYVQLPPQLADRDYLRPYYGHP
                     EWAVRSIFSGYLGWFDGNPSNLFPLRPREEAERIARLAGGPERMLAQAREALANGDAQ
                     WTAQL"
BASE COUNT          293 a          522 c          525 g          270 t
ORIGIN      
        1 acgagctgcg ggcgcagcgg gcccgggtcc ggaccggatg agaggttcgg cggcgcctcg
       61 gaaagcagcg cacgcgtgac aagctgctcc ttcgtgccaa agcgcttgag cactgcaggg
      121 gccgagatgc cgacctcctc agcgatccga gcgatcgcga cgccggggcc gtcccgcaac
      181 aggcaggcgc gggcggcttc gagaatcgcc tcgtcggaga cttgccgggg acgcatccta
      241 ttagttaaca tctattaact aactagcgca agcggacaca attcgcggcc ggcagcgctc
      301 tgctgatcaa cggaaggccg tctcaaagta caagcgcatt tctcgcaggt gcgatatcga
      361 tcgactgcgg tcactacaaa ggagaccacg ccagtgcgtc gtttacacct agcggccatg
      421 gggtgcacga ccttcgccgt cgccacgtca cttgcccagg agcaggacac ggagggcacg
      481 cggctgctcg aagcgcgcag cgcagaattc gagcgtgccg tgattgaagt caccgacaac
      541 gtgtacacag ccgtcggcta cggtgtctcg acgattacga tgatcgtagg cagcggcggc
      601 gtgatcttcg tcgacgccgg cagcgagccc gcggacacgg cagcggcgct cggcgagcta
      661 cggaagatct cgaccgcccc aatcgttgcg ttgatctaca cgcatggcca taacgatcac
      721 acgaatggct caccggcgct cgctgccgaa ggcccgatac ccgaggtgtg ggcggggccg
      781 agtttcttgg ccgaggaccg cgctttcgag acgagcggca tcacgttcgc cggtctgcgt
      841 ggcgctcgcc aggcgggtgt ccgcctgcca cccgcgaagc gcatcaacaa cggcatcgcg
      901 ccagccgttt atccgagccg ggcgacggcg ggcttcggct tcaacaacgg ccagcccgtc
      961 gtgccgaatc ggttcgtcgg cagcgagccg gagcggctcg tggtcgcagg agtcgagctc
     1021 gagctcgtcg cgaatcccgg cgagacggac gaccaactct acgtatggct gccgcagcag
     1081 caagtgatct tcgcgggcga caacttctac aaatcttggc ccaaccttta cgcgattcgc
     1141 ggcacgccgt accgtgacgt gcagacctgg gccgattccg tcgatcggct gctacagaaa
     1201 tcgcccgagc atctagtcgg cggtcatacg cgcccagtgc tcggccgcgt tgccgtgacg
     1261 gaggtactca cgggctatcg cgacgcgatt cgcttcctct tcgacaagac cgtcgagggc
     1321 atcaaccgcg gcctgacgcc ggaccagcta gtcgactacg tgcagctgcc gccgcagctt
     1381 gcggacaggg attatcttcg tccgtactac ggccatcccg agtgggccgt tcggtcgatt
     1441 ttttcgggct acctcggttg gttcgacggt aacccgtcga atctctttcc gttgcgcccg
     1501 cgcgaggaag ccgagcgcat cgcacggctc gcgggcggcc cggagcgaat gctggcgcag
     1561 gcgcgcgagg ctttggccaa cggcgacgct caatggacgg cgcagctgtg
//
LOCUS       DATCUD010000213         3855 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_87369, whole genome shotgun sequence.
ACCESSION   DATCUD010000213 DATCUD010000000
VERSION     DATCUD010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87369"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VIQ99_03010"
     CDS             complement(<1..523)
                     /locus_tag="VIQ99_03010"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEY9182140.1"
                     /translation="MIRVLFFILIVGALALIVLSLLRRTPRTGSARFPSTTDDTGEQR
                     ALPAPAAASDRSLSHATTLHLLYELAFGTALEPHVPAEHVKVVTSIASTLQAAAADPR
                     HAPRRPLLLPELVRAVNDSETTRRELAAMIARDPALVGSLLKLANSPIYRRGSKPIES
                     VERALAVLGTQGVR"
     gene            complement(527..2257)
                     /locus_tag="VIQ99_03015"
     CDS             complement(527..2257)
                     /locus_tag="VIQ99_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015348600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M28 family peptidase"
                     /protein_id="HEY9182141.1"
                     /translation="MWWDKRTMVVRAAVALAVTCTLAACERDAGSGDDAAAPAAPAAS
                     RITPAAVEAAAAIDGDDIRRVVAEISSDDYGGRLPGSEGELKARAYLAAELARLGFTP
                     LNADGSYDQLMDLVGVEAAPPAVWRFTRGAETVELARSTDFVAGSGVQAPTAGVRDAE
                     LVFAGYAIQAPEYQWDDFKDVDVRGKLLVVLNNDPDWDPALFEGVARLYYGRWMYKYE
                     SAARQGAAGVIIIHTTPSAGYPWQVVQTSWSGPQYELPAGDEPRIQLETWITEDAARR
                     LLGAEHNLDALIEQARSRDFRPVPLGITTTFELTNTVTRTPTANVLGVLRGSDPVLAD
                     QYVVYSAHYDHLGTGEPDAEGDTIFNGARDNASGVGMLVAIGEGFAALPERPRRSIVL
                     MFAAAEEQGLIGSQYFAEHPLVPIGRIAANINYDSGNIWGETRDITFLGLGKSSLDAV
                     AEEVAAHEGRIVKGDQFPDRGLYYRSDQFNFAKVGVPAFYFKEGTDFIGRPPEWGTEQ
                     INLHTERDYHQASDELTPDWNFDGMVQDSRFGFYAGLILANDDEMPAWNPGNEFEAAR
                     RASIAAVEAR"
     gene            complement(2244..2705)
                     /locus_tag="VIQ99_03020"
     CDS             complement(2244..2705)
                     /locus_tag="VIQ99_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020399251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY9182142.1"
                     /translation="MQQTVTRQELETRVGQELGVSDWFLIDQERVNAFADVTLDHQFV
                     HVDPEKARATPFGGTIAHGFLTLSLLVHLCLQFVPVLAKRKLLVNYGFDKIRFSAPVR
                     VGKRIRAIAKLGSVEERKPKQVLLRVDVTVEVEGETKPALVAEWLSMHVVG"
     gene            2860..>3855
                     /gene="rimO"
                     /locus_tag="VIQ99_03025"
     CDS             2860..>3855
                     /gene="rimO"
                     /locus_tag="VIQ99_03025"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019937172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEY9182143.1"
                     /translation="MPKTVAKSKAPKVGFVSLGCPKALVDSERILSQLKAEGYETAAD
                     YAGADVVVVNTCGFLDSARAESLDAIGEALAENGRVIVTGCLGAEANTIRDAHPGVLA
                     ITGPHQYEAVVSAVHDAIKPPHDPFVDLVPAQGVKLTPRHYAYLKISEGCNHRCSFCI
                     IPRLRGDLVSRPAADVLREAERLVRAGVRELLVISQDTSAYGVDVKYAESQWRGRSVA
                     ARITNLSAALGELDAWVRLHYVYPYPHVDELIPLMADGKILPYLDVPFQHASPKILKA
                     MKRPAAEAKTLQRIRDWRSSVPELTIRSTFIVGFPGETEQDFQTLLDWLEEAELDR"
BASE COUNT          626 a         1340 c         1252 g          637 t
ORIGIN      
        1 agcgcacccc ctgcgtcccc aagacagcga gcgcacgctc cacgctttcg atcggcttcg
       61 agccgcgccg atagatcggg ctgttcgcga gcttcaatag actcccgacg agcgccgggt
      121 cgcgcgcgat catcgccgcg agctcgcggc gcgtcgtctc gctgtcgttc acggcacgca
      181 cgagctccgg cagcagcagc ggccggcggg gagcgtgtcg agggtctgcg gccgcagcct
      241 gcagcgtgct cgcgatcgag gtcacgacct tcacgtgctc ggcgggcacg tgcggctcga
      301 gcgccgtgcc gaacgcgagc tcgtagagca agtgcagcgt cgtcgcgtgg ctcaacgagc
      361 gatcgctcgc ggccgccggc gccggcaacg cacgctgctc gccggtgtca tcggtcgtcg
      421 acgggaaacg agcgctgccg gtccgaggag tgcggcgcag caacgacagc acgatcaggg
      481 cgagcgcccc gacgatcagg atgaagaaca ggacgcggat cacgagctag cgcgcttcta
      541 cggcggcgat ggacgcgcgg cgcgcggctt cgaactcgtt gccggggttc caggccggca
      601 tctcgtcgtc attggccagg atcaagcccg catagaaccc gaaccgcgag tcctgaacca
      661 tgccgtcgaa gttccagtcg ggcgtcagct cgtcgctggc ttgatgatag tcgcgctcgg
      721 tatgcagatt gatctgctcg gtgccccact cgggcggcct accgatgaag tccgtgcctt
      781 ccttgaagta gaacgcgggc acgccgactt tcgcgaagtt gaactggtcg gagcgatagt
      841 acaggccgcg atccgggaac tggtcgccct tcacgatgcg gccctcgtgc gcggcgacct
      901 cttccgctac agcgtcgagg ctcgacttgc ctaaccccaa aaaagtgatg tcgcgcgtct
      961 cgccccagat gttgccgctg tcgtagttga tgttcgcggc gattcggccg atcggcacga
     1021 gcggatgctc ggcgaaatac tgcgagccga tcaggccctg ctcctccgcg gccgcgaaca
     1081 tcagcacgat cgagcggcgc ggccgctcgg gcagcgccgc gaatccctcg ccgatcgcga
     1141 ctagcatgcc gacgccgctc gcgttgtcgc gtgcgccgtt gaagatcgtg tcgccttccg
     1201 catcgggctc gcccgtgccg aggtggtcat agtgcgccga gtagaccacg tactggtccg
     1261 cgagcacggg atcgctgccg cgcagcaccc caagcacgtt cgcggtcggc gtccgcgtca
     1321 cggtgttcgt cagctcgaac gtcgtcgtga tgccgagcgg cacgggacga aagtcgcggc
     1381 tccttgcttg ctcgatcaac gcgtcgaggt tgtgctcggc gcccagcagc cgccgagccg
     1441 cgtcctcggt gatccacgtt tcgagctgga tgcgcggctc gtcgccggcc ggcagctcgt
     1501 attgcggccc gctccacgaa gtttgcacga cctgccacgg gtagcccgcc gacggcgtcg
     1561 tgtgaatgat gatcacgccg gccgcgcctt gccgcgccgc actctcgtac ttgtacatcc
     1621 agcgcccgta gtacaggcgc gcgacgcctt cgaacagagc cggatcccag tccgggtcgt
     1681 tgttcagcac gacgagcagc ttgccgcgca cgtcgacgtc cttgaaatcg tcccactggt
     1741 actcgggcgc ctgtatcgca tagcccgcga acacgagctc cgcgtctcgc acgcctgccg
     1801 tcggcgcctg cacgccgctg ccggccacga aatccgtgct gcgcgcgagc tcgacggtct
     1861 cggcgccgcg cgtgaagcgc cacacggccg gcggcgccgc ctcgacgccc acgagatcca
     1921 tgagctggtc gtagctgccg tccgcgttga gcggcgtaaa gcccaagcgc gcgagctcgg
     1981 ccgcaagata agctcgcgcc ttcagctcgc cttccgaacc cggtagccgc ccgccgtaat
     2041 cgtcggagga gatttcggcg acgacgcggc gaatgtcgtc cccgtcgatc gctgcggccg
     2101 cttcgaccgc cgcgggtgtg atccgcgatg cagccggggc ggccggtgca gccgcatcgt
     2161 cgccggagcc ggcgtcgcgt tcgcacgcgg ccagagtgca cgtcaccgcg agcgcgacgg
     2221 ccgcccgcac caccatcgtt cgtttatccc accacatgca tgctcaacca ttccgcgacc
     2281 agcgcgggtt tagtttcacc ttcgacctcg acagtcacat cgacccgaag cagcacttgc
     2341 ttgggcttgc gctcctcgac ggagccgagc ttcgcgatcg cgcggattcg cttgccgacc
     2401 cggaccggcg cagagaagcg gatcttgtcg aatccgtagt tcacgagcag cttgcgcttc
     2461 gcgagcactg gaacgaactg taggcacagg tgcacgagca gcgacaatgt gaggaatcca
     2521 tgcgcgatcg tgccgccgaa cggcgtcgcg cgagccttct cgggatcgac gtgcacgaac
     2581 tgatggtcga gcgtgacgtc ggcgaacgcg ttcacgcgct cctggtcgat caagaaccag
     2641 tccgacacgc cgagctcctg tccgacgcgg gtctcgagct cctggcgcgt aacggtctgc
     2701 tgcattcgta tcccctcgag cgccggtgcg ccggatccgg ttcgcgattg tcgtccgccg
     2761 gcccggttcc ggtaaagcgt gccgttgcct tttgcgccgg agcgtggcgc aatagcgccc
     2821 ccgcgcccca ccgcgcaacc ccttttgata ccggaatccg tgcccaaaac cgtcgccaaa
     2881 tccaaggcgc ccaaagtcgg cttcgtgagc ctcggctgcc cgaaagcgct cgtcgactcg
     2941 gagcggatcc tgagccagct caaggccgag ggctacgaga cggccgcgga ttatgccggc
     3001 gcggacgtcg tcgtcgtgaa cacgtgcggc tttctcgaca gcgcgcgcgc cgaatctctc
     3061 gatgcgatcg gcgaggcact cgcagaaaac ggccgcgtga tcgtcaccgg ctgccttgga
     3121 gccgaagcca acacgattcg cgacgcgcat cccggcgtgc tcgcgatcac gggcccgcac
     3181 cagtacgaag ccgtcgtcag cgccgtgcac gacgccatca agccgccgca cgatccgttc
     3241 gtcgatctcg tgccggccca aggcgtgaag ctgaccccgc gccactacgc gtacttgaag
     3301 atctccgagg gctgcaacca ccgctgtagc ttctgcatca tcccgcgctt gcgcggcgac
     3361 ttggtcagcc gccctgcggc cgatgtgctc cgtgaagcgg agcggctcgt gcgcgccggc
     3421 gtgcgcgagc tgctcgtgat ctcgcaggac acgagcgcgt acggcgtcga cgtgaaatat
     3481 gcggaatcgc agtggcgcgg gcgcagcgtc gcggcgcgaa tcacgaactt gagcgccgcg
     3541 ctcggcgagc tcgacgcatg ggttcggctg cactacgtct atccgtatcc gcacgtcgac
     3601 gagctgatcc cgttgatggc cgacggcaag atcctgccgt acctggacgt gccgtttcag
     3661 cacgcgagcc cgaaaatctt gaaggccatg aagcgccccg cggccgaggc caagacgctg
     3721 cagcggatac gcgactggcg cagctccgtg cccgagctca cgatccgctc gacgttcatc
     3781 gtcggctttc ccggcgagac cgagcaggat ttccagacgt tgctggactg gctcgaggag
     3841 gccgagctcg atcgc
//
LOCUS       DATCUD010000214         4552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44731, whole genome shotgun sequence.
ACCESSION   DATCUD010000214 DATCUD010000000
VERSION     DATCUD010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44731"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VIQ99_03030"
     CDS             <1..323
                     /locus_tag="VIQ99_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005223926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEY9182144.1"
                     /translation="GLVTDGRDMGTVVFPDALMKVVLTASAEARAMRRHKQLKEKGID
                     VSLPDLSWDIAQRDARDATRAAAPFRPAADAQVIDSTSRTPEEVVAHILQWLQRVGVV
                     AQRA"
     gene            405..2081
                     /gene="rpsA"
                     /locus_tag="VIQ99_03035"
     CDS             405..2081
                     /gene="rpsA"
                     /locus_tag="VIQ99_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006788044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEY9182145.1"
                     /translation="MSESFAQLLEESFASQKIKTGSILTGTVIGVNADMVIVNAGLKS
                     EAVIPAEQFLNERGELEVKVGDHVEVALDTVEDGFGETRLSREKAKRTRTWTRLEEAF
                     QKGEIVNGTISGRVRGGFTVDIDLVRAFLPGSLVDVRPIRDPAALEGSTLEFKVIKLD
                     QKRNNVVVSRRAVVEAEYSAERESLLKNLQEGTVLKGVVKNLTDYGAFVDLGGIDGLL
                     HITDMAWKRVKHPSEVVSVGQELEVKVLKFDRERNRVSLGLKQLGADPWADLARRYPP
                     NTRLFGKVTNIADYGCFAEIEEGVEGLVHVSEMDWTNKNVNPHKVVQIGDEVEVMVLD
                     IDEERRRISLGLKQCKPNPWVEFGENYKKGDKVSGQIKSITDFGVFIGLPGGIDGLVH
                     LSDLSWDVPGEEAVRNYKKGEEIETTVLAIDPERERISLGVKQLDKDPLSLFLGDHPK
                     GSIVSGVVQELDAKLATVALEGGMIGHLRASEMARDRVEDARTVLKVGETVEAKITGV
                     DRKTRIISLSIKAKEVHEEQQALQNYKSDSGRTTTGTTLGDLLKEQMSPE"
     gene            2138..2440
                     /locus_tag="VIQ99_03040"
     CDS             2138..2440
                     /locus_tag="VIQ99_03040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEY9182146.1"
                     /translation="MTKSELIESIARSQKHLPAKDVELAVKHILELMSEALANGERIE
                     IRGFGSFSLHYRPPRMGRNPKTGEAVALAGKNVPHFKPGKDLRERVNESRHLPVRD"
     gene            2519..3703
                     /locus_tag="VIQ99_03045"
     CDS             2519..3703
                     /locus_tag="VIQ99_03045"
                     /inference="COORDINATES: protein motif:HMM:NF037181.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182147.1"
                     /translation="MPTDATFLLAALFLVFGALGFVYKIFTDRDRDLPPRISADYLRG
                     LNLVLNRRTDEALELFVQMAKVDDDTLETHFALGHLFRRRGEFERAIRVHENLLARPS
                     LSEAQRHQAVFSLAEDYLGAGLFDRAEQLFSELRDSSTLAAAALDKLVGIYEREQDWH
                     KAIEALRKLEMLRGTKSNQVAQYYCELAEAARAAGDRELAREYLRNTVRSESGALRGA
                     LIRAALAQEDRDYTQAIALYEQVISTNQHFITEVLPSLLECYRAMNRVAEFDAYLGTL
                     IARDDSLHKNLAYAAIIANLGGSAALSRLVERFVFEHPVLANLVNAGELKNLPAEQRG
                     SAIERIASGLRTIALANARYRCSNCGYSTQRFIWHCPSCKLWETIRPISSVPLETVLN
                     PP"
     gene            3805..4089
                     /locus_tag="VIQ99_03050"
     CDS             3805..4089
                     /locus_tag="VIQ99_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017841027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY9182148.1"
                     /translation="MEAMTLRGICALAAACVGFAAAAGPVNINTADAATLANELTGVG
                     PALAEAIVADRKANGNFATPEALARVKGIGDRIVEMNKANILVADPAPPR"
     gene            4223..>4552
                     /locus_tag="VIQ99_03055"
     CDS             4223..>4552
                     /locus_tag="VIQ99_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013391740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HEY9182149.1"
                     /translation="MSKIRTAVFPVAGRGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     ALEAGAERLVFITGSSKRAIEDHFDTDAELEKLLDSQGKSELADQLRSVLPASATCIY
                     IRQPAPLG"
BASE COUNT          901 a         1376 c         1496 g          779 t
ORIGIN      
        1 cggggctcgt cacggacggg cgcgacatgg ggactgttgt gtttcccgac gcgctcatga
       61 aggtggtact gacggccagc gccgaggcgc gtgcgatgag gcgtcataag cagttgaaag
      121 aaaaggggat tgatgttagc ctgcccgacc tttcttggga catagcgcag cgggatgcgc
      181 gcgacgcgac ccgcgcggcg gcgccatttc ggccggcggc ggatgcgcag gtcatcgact
      241 cgacgagtcg tactcccgag gaggtcgtcg cccacatatt gcagtggctc caacgtgtgg
      301 gggtcgtagc gcagcgagcc tagtggttgc agcggccgga tgccgttgtc gttcaaaggt
      361 caacccgtgt ttgcaggatg cgaagcggtc agcggaaaca aatcatgagc gaatcatttg
      421 cgcagctttt agaagagagt tttgccagtc agaagatcaa gacgggatcg atcctcacgg
      481 gtaccgtcat cggcgtaaac gccgacatgg tgatcgtcaa cgccgggctg aagtccgagg
      541 cggtcatccc agccgaacag tttttgaacg agcgcggtga gctcgaggtc aaggtcggcg
      601 accacgtcga agtggcgctc gacaccgtcg aggacggctt tggcgagacg cgcctatcgc
      661 gcgagaaggc caagcgtacg cgcacgtgga cgcgcctcga ggaggcgttc cagaaaggcg
      721 agatcgtcaa cggcaccatc agcggccgcg tacgcggtgg tttcacggtc gatatcgacc
      781 tcgtccgcgc gttcttgccg ggctcgctcg tcgacgtgcg gccgattcgc gatccggcgg
      841 cgctcgaagg ctccacgctc gagttcaagg tcatcaagct cgaccagaag cgcaacaacg
      901 ttgtcgtgtc gcgccgtgca gtcgtcgagg ccgaatacag cgcagagcgt gagtcgctct
      961 tgaagaacct ccaggaagga accgtcctca agggcgtggt caagaacctc accgactacg
     1021 gtgcgttcgt cgacttgggc ggcatcgacg gcttgctgca catcaccgac atggcgtgga
     1081 aacgggtcaa gcatccgtcg gaggtcgtca gcgtcggcca ggagctcgag gtcaaggttc
     1141 tcaagttcga tcgcgagcgc aaccgcgtgt cgctgggctt gaagcagctc ggcgccgatc
     1201 cgtgggcgga tctcgctcgg cgctacccgc cgaatacgcg gctgttcggc aaggtcacga
     1261 atatcgcgga ctacggctgc ttcgccgaga tcgaggaagg ggtcgaaggc ctcgtccacg
     1321 tgtccgagat ggattggacc aacaagaacg tgaaccccca caaggtcgtg caaatcggcg
     1381 acgaggtgga ggtcatggtg ctcgatatcg acgaagagcg ccggcgcatt tcgctggggc
     1441 tcaagcagtg caaaccgaat ccgtgggtcg agttcggcga gaactacaag aagggcgaca
     1501 aggtttcggg ccagatcaag tcgatcaccg acttcggcgt gttcatcgga ctgcccggcg
     1561 gcatcgacgg tctcgtgcac ctctccgatc tgtcgtggga cgtgccgggc gaagaggccg
     1621 tacgaaacta caagaagggc gaggagatcg agacgacggt gctcgcaatc gacccggagc
     1681 gggagcggat ttcgctcggc gtcaagcagc tcgacaagga tccgctgtcg ctgttcttgg
     1741 gcgaccatcc gaagggcagc atcgtgtccg gcgtcgtgca agagctcgat gcgaagctcg
     1801 cgaccgtggc tctcgaaggc ggcatgatcg gccatttgcg cgcttccgaa atggcacgcg
     1861 accgcgtcga ggacgctcgc accgtgctga aggtcggcga gacagtggaa gcgaaaatca
     1921 caggcgtgga ccgcaagacg cggatcatct ctctgtcgat caaggccaag gaagtccacg
     1981 aagagcagca ggcgcttcag aactacaaga gtgattccgg tcgcaccacg accggcacca
     2041 cactcggcga tttgctcaag gagcagatga gtcctgaatg aggtcttcgc gcagcggcgc
     2101 gaggcgtgca cgagacgcag gaagaaggtc catactgatg acaaaatccg agctcatcga
     2161 gtcgatcgcc cgcagtcaaa agcacttgcc tgcgaaggac gtggaactgg ccgtcaagca
     2221 catcctcgag ctaatgagcg aggctctcgc caacggtgag cgaatcgaga tacgcggctt
     2281 tggctcgttc tcgctgcact accgcccgcc gcggatgggg cgcaacccca agaccggcga
     2341 agcggtggcc cttgcgggca agaacgttcc gcatttcaag cccggtaagg atcttcgcga
     2401 acgggtgaac gagtcccggc acttgccggt acgcgactag ctggcgggtc ctgacgtggg
     2461 gcgcggtcac gcgcggaggg acacgggccc gggcatgccg ctcgggccga tctaattcat
     2521 gccgaccgac gccacgttcc tgcttgccgc attgttcctc gtgttcggtg cgctgggctt
     2581 cgtctacaag atctttaccg accgcgatcg agacctaccg ccgcggatca gcgctgatta
     2641 cctgcgcggc ctgaacctcg tgttgaatcg ccgcaccgac gaagcgctcg agctgttcgt
     2701 gcagatggcg aaagtcgatg acgatacgct cgagacgcac ttcgccctcg ggcatctttt
     2761 ccgcagacgc ggtgagttcg agcgcgcgat tcgcgtgcac gagaacctgc ttgctcggcc
     2821 gagcttgagc gaagcacagc gccaccaagc cgtgttctcg ctggccgagg actacctggg
     2881 agccgggctc ttcgacaggg ccgagcagtt gttctcggag ctgcgcgaca gcagcacgct
     2941 cgcggcggcc gccctcgaca agctcgtcgg gatctacgag cgcgagcaag actggcacaa
     3001 ggccatcgag gcgctgcgca agctcgagat gctccgtggc acgaaatcca atcaggtcgc
     3061 gcagtactat tgcgagctcg ctgaagcggc cagggccgcc ggcgaccgcg agttggcgcg
     3121 cgaatacctg cggaacaccg tgcgcagcga atcgggcgcg ctacgcggcg cgttgattcg
     3181 cgccgcgctg gctcaggagg accgcgacta cacgcaagcg attgcgctct acgagcaggt
     3241 catctccact aaccagcact tcatcaccga ggtgctgccg tcactgctcg agtgctaccg
     3301 cgcgatgaat cgcgtcgccg agttcgatgc gtatctcggg acactgatcg cgagggacga
     3361 ttcgctgcac aagaatctcg cgtacgccgc catcatcgcg aatctcggcg gctcggcggc
     3421 gttatcgcgc ctcgtcgaac ggttcgtatt cgagcatccc gtcctggcca atctcgtgaa
     3481 cgccggcgaa ttaaagaact tgcccgcgga gcagcgcgga tccgcgatcg agcgcatcgc
     3541 aagcgggctg cggaccatcg ccttggcgaa tgcgcggtac cggtgcagca attgcggcta
     3601 tagcacgcag cgattcatct ggcactgccc gagttgcaag ctctgggaaa ccatccgtcc
     3661 aatctcgagc gtgcccctcg agacggtgct gaatccgccc tgagccacac gcaagaatct
     3721 gcgtgaaccc gtgagattgt gtagctgctg ggccacgcag caacgcctag catggcgact
     3781 cctttcaaca caggagttga gcccatggaa gcgatgacgt tacgagggat ctgtgcgttg
     3841 gctgcggcgt gtgtggggtt cgcagcggcg gcggggcccg tgaatatcaa caccgccgat
     3901 gcggcgacgc tggccaacga gctgacgggc gtcgggcccg cactggcgga ggcgatcgtc
     3961 gcagatcgca aagcgaatgg aaacttcgcg acgccagagg cgctggcacg cgtgaagggt
     4021 atcggggacc gcatcgtcga gatgaacaag gccaacattc tcgttgccga tccggcgccg
     4081 cctcgctgag ccgcatcgat cccgggtgcg gggcgcgcca cctcgcaccc gggctcgggt
     4141 ccaggtctcg tgaacgacgc cacacccttg aaacgacggc cttcggtatc atgttgcggt
     4201 cagtgatact cgaggagcat cgatgtcgaa gattcggacg gccgtttttc cggttgcggg
     4261 gcggggcacg cgctttctgc ccgcgacgaa ggcttcaccg aaggagatgc tgccgatcgt
     4321 cgataagccg ttgatccagt acgccgtcga agaagcgctg gaggccgggg ccgagcgtct
     4381 cgtcttcatc accggctcgt cgaaacgagc catcgaggat cacttcgata ccgacgccga
     4441 gctcgagaag ctgctcgact cccagggcaa gtccgagctg gccgaccagc tgcgcagcgt
     4501 gctgccggcc tcggccacct gcatctacat ccggcaaccg gcaccacttg gc
//
LOCUS       DATCUD010000215         1668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9160, whole genome shotgun sequence.
ACCESSION   DATCUD010000215 DATCUD010000000
VERSION     DATCUD010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9160"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..280)
                     /locus_tag="VIQ99_03060"
     CDS             complement(<1..280)
                     /locus_tag="VIQ99_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006912143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEY9182150.1"
                     /translation="MSVATTSWSRVIVHADMDAFYAAVEQLDDPSLRGKPLLIGPDSA
                     RGVVLTASYEARPFGVGSAMPMQRARRLCPQALVVPPRFDRYQQISRII"
     gene            complement(277..1173)
                     /locus_tag="VIQ99_03065"
     CDS             complement(277..1173)
                     /locus_tag="VIQ99_03065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011395918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HEY9182151.1"
                     /translation="MPELPDITVYLEALEERIAGRRLDRSRINSAFLLRSVEPRLEDA
                     HGARVAALERLGKRIAIGFDNDVWLILHLMIAGRLQWRADWPQKIGRPTALLLGFDSG
                     TLALTEAGTKKRASLHVVRGRAALAQHEPGGLEVATATAAEFRAALQRRNHTLKRALT
                     DPRLFSGIGNAYSDEILHRAALSPVQLTTKLTAEQHDRLFGATRAVLVEWTERLRRQR
                     GCDFPGKVTAFHEEMAVHGRYRQPCPVCGTAVQRIRYADNETNYCPRCQTGGRVLADR
                     SLSRLLKQDWPRTIDELERLRP"
     gene            complement(1178..>1668)
                     /locus_tag="VIQ99_03070"
     CDS             complement(1178..>1668)
                     /locus_tag="VIQ99_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182152.1"
                     /translation="ETGRADAVRTRWSALLASNPPAEIAEVLRAELANLGAPSAEPAA
                     AAVAGPTIKIDVSLGPGKSIEQLAPAAQLFIFARAPEGGPPLAVLRQPASAVPGQFTL
                     SDANSMIQGRSLANFERITVVARLSASGQPTEQPGDWFAQADVDPTDAGAVALVIDQV
                     VQ"
BASE COUNT          286 a          572 c          542 g          268 t
ORIGIN      
        1 tgatgatccg cgagatctgc tgataacgat cgaaacgtgg cggcacgacg agtgcctgcg
       61 gacacagacg acgcgcccgc tgcatgggca tcgcgctacc cacaccgaac ggccgcgctt
      121 cgtaactcgc cgtcagcacg acgccgcgag cgctgtcggg cccaatcagc agtggtttcc
      181 cgcgcaaaga cgggtcgtcg agttgctcga cggcggcata gaacgcgtcc atgtccgcat
      241 gcacgatgac tcgcgaccag ctcgtcgtgg ccacgctcat gggcggagcc gctcgagctc
      301 gtcgatcgtt ctcggccaat cctgcttcag gagccgcgac aacgagcggt cggcgagcac
      361 gcgtccgccg gtctggcaac gcggacagta attcgtttcg ttgtcggcat agcgaatgcg
      421 ctgcacggcc gtgccgcaga cggggcacgg ctgccggtaa cggccgtgta ctgccatttc
      481 ctcgtgaaac gcagtgacct tgcccggaaa gtcgcaaccg cgttgccggc gcagccgctc
      541 ggtccattcc acgagcacag cgcgtgttgc gccgaacaag cgatcgtgct gctccgctgt
      601 cagcttcgtc gtcagctgca ccggcgacag cgctgcccga tgcagaatct cgtcggaata
      661 cgcgttgccg attccgctga agaggcgcgg atccgtaagc gcacgcttca aggtgtgatt
      721 gcgccgctgg agcgccgctc gaaactctgc cgcagtggcc gtcgcgacct ccaaaccgcc
      781 gggctcgtgc tgcgcaagcg ccgcacgccc gcgtacgacg tgcaacgacg cccgcttctt
      841 ggtcccggcc tccgtcaacg ccaacgtgcc ggagtcgaag ccgagcaaca acgctgtggg
      901 tctgccgatt ttctgcggcc agtcggcgcg ccattgcagc cgccccgcaa tcatcaagtg
      961 caggatcagc caaacgtcgt tgtcaaatcc gatcgcgatg cgtttcccga gccgttcgag
     1021 cgcggcgaca cgcgcgccgt gcgcgtcctc gagcctgggc tcgacgctgc gaagcaagaa
     1081 ggcagaattg atgcggctgc gatcgagacg gcggccggct atgcgctcct cgagggcttc
     1141 gaggtagacc gtgatgtccg gcagctcggg catgcgctca ttggaccacc tgatcgatca
     1201 cgagcgctac cgcgcccgcg tccgtgggat cgacgtcggc ttgcgcgaac cagtcgccgg
     1261 gctgctcggt tggctggccg gaggccgaca agcgcgcgac caccgtaatg cgctcgaaat
     1321 tcgcgagcga ccggccttgg atcatgctgt tcgcgtcgct gagcgtgaac tgccccggca
     1381 ctgcggacgc gggttggcgc agtaccgcaa gcggcgggcc gccctccggt gcacgcgcaa
     1441 aaatgaacag ctgggcggcc ggcgccagct gctcgatcga cttgcccggc ccgagactca
     1501 cgtcgatctt gatcgtcgga cccgcaacgg cggcggccgc gggctcggcg ctcggcgcac
     1561 cgaggttcgc aagctccgcg cgcaagacct ccgcgatctc cgcgggtgga ttcgacgcaa
     1621 gcaaagccga ccaacgagtc cgaaccgcat ccgcgcgccc ggtttcga
//
LOCUS       DATCUD010000216         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_80326, whole genome shotgun sequence.
ACCESSION   DATCUD010000216 DATCUD010000000
VERSION     DATCUD010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80326"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..1145
                     /locus_tag="VIQ99_03075"
     CDS             216..1145
                     /locus_tag="VIQ99_03075"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182153.1"
                     /translation="MRFEITATLICVGAIALSAAAVRAQEADGQAPTPFADPAELAFE
                     EGRWEDAIDEYREILAAYPEDRLSLLRIAQAQRELKRHDDALATLETARTANAPEAMI
                     DLERARNLALLGRDDEALAALDAADHSGLRALALVESAPEFDRYRSLSRFERVHRNMR
                     ARVYPCEGLAEADDFDFWVGRWEVRMPDGTPIGTNTITKRDGGCSIQERWEGAGGSTG
                     TSVTFYLPSRGEWRQVWTGSGGTLFDITGTAENGSMHMEGTIEYVEPNRVVAFRGTWT
                     EGADGRVRQRLEEFDLAAQTWVVWFDGFYRRLD"
     gene            1166..1489
                     /locus_tag="VIQ99_03080"
     CDS             1166..1489
                     /locus_tag="VIQ99_03080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182154.1"
                     /translation="MNGRPFSFGASGNPLVQILSLVVFAVIVAGAVIMGAFVLLAFLG
                     FAAIAVLVFTVRGWWLKRKLRSGTGPFADGPGPTKGVRYIEGEYKVVDVHEAKRRRSN
                     EGPRE"
BASE COUNT          250 a          485 c          539 g          246 t
ORIGIN      
        1 gtcacacgcg agcgccgtcg agccgatgct gcagagcagg accataaaga gtgtgtcttt
       61 cacgttcatc gctctccccc cgagcgttgc cgcatcccgt cacggcgaca aagtctagcg
      121 tgccgcggtc gcgatgtccc gggtgccgat ggaaaaaccg acgaccgctt gcgttcgagg
      181 cgtgaagctt gggacgatgc gcgcggggag actcgatgcg cttcgaaatt actgcgaccc
      241 tgatttgcgt cggcgcgatc gcgctgtcgg cagcggccgt gcgcgcgcaa gaggcggacg
      301 gccaggcgcc gacgccgttc gccgatccgg ccgagctcgc gttcgaagaa ggccggtggg
      361 aagacgcgat cgacgagtac cgcgagatcc tcgcggcgta tcccgaggat cgcctgagcc
      421 tgttgcggat cgcgcaagcg cagcgcgagc tcaagcgtca cgacgacgcg ctcgcgacgc
      481 tcgaaaccgc gcgcacggcg aatgcgcccg aggcgatgat cgatctcgag cgcgcgcgga
      541 acctcgcgtt gctcggccgc gatgacgaag cgctcgcggc actcgatgcc gcggaccaca
      601 gtgggctgcg cgcgcttgcg ctcgtcgaga gcgctccgga gttcgatcgg tatcggtcgc
      661 tgagccgctt cgagcgcgtg catcgcaaca tgcgtgcgcg cgtctatcct tgcgaaggcc
      721 tcgccgaggc cgacgacttc gacttctggg tgggacgatg ggaagtccgg atgccggacg
      781 gcacgccgat cggcacgaac accatcacca agcgcgacgg cggctgctcg atccaggaac
      841 gctgggaagg cgcgggcggc tccacgggca cgagcgtgac gttctacttg ccgagccgcg
      901 gcgaatggcg ccaggtgtgg acggggtcgg gcggcacgct attcgacatc acggggacgg
      961 ccgagaacgg ctcgatgcac atggagggca cgatcgaata cgtcgagccg aaccgcgtcg
     1021 tggccttccg cggcacttgg accgagggcg ccgacgggcg cgtgcggcag cgcctcgagg
     1081 agttcgacct ggccgcgcag acctgggtcg tgtggttcga cggcttctac cggcggctcg
     1141 attgacgttc ggttagaatc tggccatgaa cggccggcct ttctccttcg gcgcctcggg
     1201 caacccgctc gttcaaatac tctcgctggt cgtgttcgcg gtgatcgtcg cgggcgccgt
     1261 gatcatgggc gcgttcgtgc tgctcgcatt cctcgggttc gccgcgatcg cagtcctcgt
     1321 attcacggtc cgtggctggt ggctcaagcg gaaactgcgc agcggcaccg gtccgttcgc
     1381 cgacggcccg ggcccgacga aaggtgttcg gtacatcgag ggcgagtaca aagtcgtcga
     1441 cgtgcacgag gcgaaacgcc gtcgttcgaa cgagggccca cgagagtgag cgcgccgacg
     1501 ttaccgggct cagcggatcg
//
LOCUS       DATCUD010000217         4118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16470, whole genome shotgun sequence.
ACCESSION   DATCUD010000217 DATCUD010000000
VERSION     DATCUD010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16470"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1225
                     /locus_tag="VIQ99_03085"
     CDS             <1..1225
                     /locus_tag="VIQ99_03085"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9182155.1"
                     /translation="SASRDRNRTRSALVVVQVALALVLVVSSALMIRTFEALHDVDPG
                     FADPATIQTVRVWNPLFYVDAARNIRAEREMLDKLSSLPGVTSAGFTSTLPMEGQTSF
                     APIVFDGQTVPAGQMPASRRHKHVSPGYFEAMGTRIIAGRDVTWDDIETGGRVALISE
                     DFARELAPDPAGAVGKRIKTFLETDAWREVIGVVQNVRENGLNEDAPSMVYWPAVVES
                     MFGSPLIATPSPAFVLRTERADTATFLAEVRQAIRSVDASLPISNERTMRDLYSGSLA
                     RTSFVLALLAIAGGMALVLGVIGIYGVIAYVVSQRRREIGIRAALGAEPGQLKRTFLL
                     HGLALTVVGAAVGLVAAVALGGLMSSVLFGVSPLDPIAYVVAVGVTVAAAALASYVPA
                     RRAAMIDPIETLRAD"
     gene            1411..1977
                     /gene="petA"
                     /locus_tag="VIQ99_03090"
     CDS             1411..1977
                     /gene="petA"
                     /locus_tag="VIQ99_03090"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015434501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEY9182156.1"
                     /translation="MNRRKLLNIALTAISGIGAYASAIPFVKSFLPSARAKGLGEPVQ
                     FDLEQLEAGEVRALEYRGRVMLILRRTAEMIDTLQATVARTQRPDDAPDPAYVSPQLR
                     SINPEFLIVEGVCTHLGCVPQRKSKAEGKSYLGSTWEGGFVCPCHGSAFDYAGRVVRG
                     PAPSDLAIPPHRFATPSQIVIGETPNPT"
     gene            2191..2967
                     /locus_tag="VIQ99_03095"
     CDS             2191..2967
                     /locus_tag="VIQ99_03095"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9182157.1"
                     /translation="MPTWQQLRDVPHGIVQRIEYQSQSINKAREAIVYLPPGYDNGTD
                     RYPVLYLLHGAGGDESVWNERMQANVILDNLIADGELDPLVVVMPHGFTNRMPTDDRP
                     RTAGAYKTEMEEFALDFVRDLVPLVESRFHVVADRTQRAIAGNSMGGGQALAIGLAHP
                     DMFSGVASFSAAMQIATDPAWGGIDMDAALANADAINELDMLWVGCGTEDSLFDLNQR
                     FSDQLTEAGVEHTFRSTPGAHTPAVWSRYLHEVAPQLFQR"
     gene            complement(3008..>4118)
                     /locus_tag="VIQ99_03100"
     CDS             complement(3008..>4118)
                     /locus_tag="VIQ99_03100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY9182158.1"
                     /translation="LAIPFFILAGALMTTGGVAKRMIAFANSLVGHFRGGLAMAALLA
                     CALFAAVSGSSPATVVAVGSIMIAGMARSGYTREFAAGLICNAGTIGILIPPSIVMVV
                     YGAVTETSIGDLFIAGVLPGVLLTVVLMIAVAVLARRMNLPRQPRADWRTVLRAGREA
                     IWGLLLVVIILGGIYSGIFTPTEAAAVSAVYAFVIAVFVYRDVSLREAPRVIADAAKV
                     TAMLMFIIANAYLFAFVLTTEQVPQAMSQWITDLGLPPWAFLIVLNLLLLVAGSFMEA
                     TSVVLIFAPIMFPIATALGIHPVHLGIIMTVNMEIGMVTPPVGLNLFVTSGIAKLPVT
                     AVIRAAMPWLVVLLLVLVIVTYVPWVSLVLPQWLG"
BASE COUNT          781 a         1370 c         1302 g          665 t
ORIGIN      
        1 cagcgcgagc cgcgaccgga accggacgcg cagcgcgttg gtggtcgtgc aggtagcgct
       61 cgcgctcgtg ttggtcgtga gctcggcgtt gatgatccgc acgttcgagg cgctgcacga
      121 cgtcgatccc ggcttcgcgg acccggcgac gatccagacg gtgcgcgtct ggaacccgct
      181 gttctacgtc gacgccgcgc gcaacatacg cgctgagcgc gagatgctcg acaagctctc
      241 ctcgttgccg ggcgtcacgt cggccggctt cacgagcacg ttgccgatgg aaggacagac
      301 gagctttgcg ccgatcgtct tcgacggaca gacggtaccc gcaggtcaaa tgccggcatc
      361 gcggcgacac aagcacgtct cgccgggcta cttcgaagcc atgggcacga ggatcatcgc
      421 gggccgcgac gtgacctggg acgacatcga aactggcggc cgcgtcgcgt tgatctcgga
      481 ggatttcgcg cgcgagctcg cgccggatcc cgccggcgcc gtcggcaagc gcatcaagac
      541 gttcttggag acggatgcct ggcgcgaggt gatcggcgtc gtgcagaacg tccgcgagaa
      601 cggcttgaac gaggatgcac cgagcatggt gtactggccc gcggtcgtgg agagcatgtt
      661 cggcagcccg ctgatcgcaa cgccttcccc cgcgttcgtg ctccgcaccg agcgtgcaga
      721 caccgccacc ttcctcgccg aggtgcgtca ggcgatccgc tccgtggacg caagcttgcc
      781 gatctccaac gagcgcacga tgcgcgatct gtactccggt tcgctcgcgc gcacgtcgtt
      841 cgtgctcgcg ctgctcgcga tcgcgggcgg catggcgctc gtgctcggcg tgatcgggat
      901 ctacggcgtc atcgcctacg tggtgtcgca gcgcagacgc gaaataggta tccgcgccgc
      961 gctcggcgcc gagccgggac agctcaagcg gacgttcctg ctgcacgggc tcgcattaac
     1021 cgtcgtcggc gctgccgtgg gtctcgtcgc agccgtcgct ttgggaggcc tgatgtcgtc
     1081 ggtgttgttc ggcgtcagcc cgctcgaccc gatcgcgtac gtcgtcgcgg tcggcgtcac
     1141 ggtcgcggcg gctgcgctcg cgagctacgt gcccgcgcgg cgtgcggcca tgatcgaccc
     1201 gatcgaaacg ctgcgggcgg actagcgcga ggatttcctc attctttcac acgggcgggt
     1261 taccgtgagc tcgtcttccg acagctcgcc gggccacgct ggatgactcg cagcagccat
     1321 gggttgtatg actctggttg gccgaacgac gtcgcaccga tcgagcattc ttagtaagat
     1381 gtggcgtccg ccccgcgaag gcgaagcgcc atgaacagac gcaagctgct gaacatcgca
     1441 ctcactgcta tcagcggcat cggggcttac gcgtccgcca tcccgttcgt aaaaagcttt
     1501 ctaccgagcg caagagcgaa agggctcggc gaacccgtcc agttcgatct cgaacaactc
     1561 gaggctggcg aagttagagc gctcgaatat cgcggccgtg tgatgctcat tcttcggcga
     1621 accgcggaga tgatcgacac cctgcaagcg acggtcgcgc gaacgcagag gcccgatgat
     1681 gctccagatc ccgcatatgt ctccccccaa cttcgatcca taaaccccga gttcctcatt
     1741 gtcgaaggcg tgtgcacgca ccttggttgt gtgccccagc ggaagagcaa ggcggagggg
     1801 aaatcttact tgggcagcac atgggaaggc ggctttgtct gcccctgtca tggctcagcc
     1861 ttcgactatg caggccgcgt tgttcgtggc cccgctccga gcgatcttgc tatccctcct
     1921 caccgctttg cgacgccgtc gcaaatcgta atcggcgaaa cgcctaaccc cacctgacaa
     1981 caaatttcgc agccccaccg aaagggggaa tcgaacaggt gccggcgggc agatttttgg
     2041 gaatatcgcc ccaacgcgtg acgcggcaac cgaattgcgg gaactgaaac gcaacccgga
     2101 ggcgcagtga aactcagaac accactttct tgggctctca cgacggctct gctcgcgcta
     2161 gcagcgtgcg accgggcgca ggattccgcc atgcccacgt ggcagcaact gcgtgatgtt
     2221 ccgcacggca tcgtgcaaag gatcgagtat cagtcgcagt cgatcaacaa ggcacgcgag
     2281 gccatcgtct accttccgcc tggttacgac aacggcaccg atcgctatcc ggtcctgtat
     2341 ctcctgcatg gcgcgggcgg cgacgagtcc gtctggaacg agcgcatgca agcgaacgtg
     2401 atcctcgaca atctgatcgc cgatggcgag ctcgatccgc tcgttgtcgt catgcctcac
     2461 ggctttacga accgcatgcc gaccgacgac cgaccccgca cggccggcgc ctacaagacc
     2521 gagatggaag aattcgcgct cgatttcgtc cgcgatctgg ttccgctcgt cgagtcgcgc
     2581 ttccacgtcg ttgcggaccg cacgcagcgc gcgatcgccg gcaactcgat gggcggcggc
     2641 caagcactcg ccatcgggct cgcgcatccg gacatgttca gcggcgtcgc aagcttcagc
     2701 gcggccatgc agatcgccac tgaccctgcc tggggcggca tcgacatgga cgcggcgctc
     2761 gccaacgccg acgcgatcaa cgagctcgac atgctctggg tcgggtgcgg gaccgaggac
     2821 agcctcttcg acctcaacca acggttttcg gatcagctga ccgaggccgg cgtcgagcac
     2881 acgttccgca gcacgcccgg tgcgcacaca ccggccgtct ggagccgcta tctgcacgag
     2941 gttgctccgc agctattcca gagatgaaga gcatggaaga gaccatgcac gtgtcgaaag
     3001 gatcagctca cccgagccac tgcggcagca cgagcgacac ccacggcacg taggtcacga
     3061 tcacgagcac gagcagcagc acgacgagcc acggcatcgc ggcgcgaatc acggccgtca
     3121 ccggcagctt cgcgatgccc gacgtcacga acagattcaa gccgaccggc ggcgtgacca
     3181 tgccgatctc catgttcacg gtcatgatga tgccgagatg cacgggatga atgccgaggg
     3241 cggtcgcgat cgggaacatg atcggcgcga agatcagcac caccgacgtc gcctccatga
     3301 agctgccggc gacgagcagc aacaggttca acacgatcag gaatgcccac ggcggcagcc
     3361 cgagatcggt gatccactgc gacatcgctt gcgggacttg ctccgtcgtc agcacgaacg
     3421 cgaacagata cgcgttcgcg atgatgaaca tcagcatcgc ggtgaccttc gccgcgtccg
     3481 caatcacgcg cggcgcctcg cgcaagctca cgtcgcgata gacgaacacc gcgatcacga
     3541 acgcgtacac cgcggacacg gccgccgctt cggtcggcgt gaagatgccg ctgtagatac
     3601 cgcccaggat gatcacgacc agcagcaggc cccagatcgc ctcgcggccc gcacggagca
     3661 ccgtgcgcca atcggctcgc ggctggcgcg gcaaattcat gcggcgcgcg aggactgcga
     3721 ccgcgatcat cagcacgacc gtgagcaaga ccccgggcag gacgcccgcg atgaagagat
     3781 cgccgatcga cgtctccgtg acggcgccgt agacgaccat cacgatcgac ggcggaatca
     3841 ggattccgat cgtgcccgcg ttgcagatca accccgccgc gaactcgcgc gtgtagccgg
     3901 agcgcgccat gccggcgatc atgatcgagc cgaccgcgac gaccgtcgcc ggcgacgagc
     3961 cggagaccgc ggcgaacagc gcgcacgcga gcagcgcggc catcgcgagg ccgccgcgga
     4021 agtggccaac gagcgagttc gcgaacgcga tcatccgctt cgcgacgccg cccgtcgtca
     4081 tcaatgcgcc tgcgagaatg aaaaacggaa ttgcgagc
//
LOCUS       DATCUD010000218         1530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23628, whole genome shotgun sequence.
ACCESSION   DATCUD010000218 DATCUD010000000
VERSION     DATCUD010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23628"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..501
                     /locus_tag="VIQ99_03105"
     CDS             <1..501
                     /locus_tag="VIQ99_03105"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY9182159.1"
                     /translation="IPNAFATLGGHIVVTSELYRLMPSENALAMVLAHEIAHVKARDP
                     ISALGSGASLALVFAFVSGEADGLAPQIAGLVQLGYSRSVERRADLEAVAALRAHYGH
                     AGGGASLFEVLAQQHDPVSGAVPTFLSTHPADAERIDELKRAAADWDPSRQPLAPVRV
                     PAPRGD"
     gene            complement(498..1025)
                     /locus_tag="VIQ99_03110"
     CDS             complement(498..1025)
                     /locus_tag="VIQ99_03110"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEY9182160.1"
                     /translation="MKRRWSVAFLLASTVVGLGLVASAGADNRGKRPEIVRARLVGYS
                     EVPSQSVPGQGSFRAVIDEDAGTITYTLSYEGVAITQSHLHLGQHHTNGAISVFLCTN
                     LGNAPAGVTVQPCPAAPAEITGVIMAAQVVGPAAQGIAAGEFSELVAAIRNGSVYVNI
                     HSPTVPAGEIRGQLF"
     gene            1224..>1530
                     /locus_tag="VIQ99_03115"
     CDS             1224..>1530
                     /locus_tag="VIQ99_03115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein"
                     /protein_id="HEY9182161.1"
                     /translation="MRVEALKTLALLAATVTWQVDAQTAATPPYEAGKHYTEVPTPQP
                     TSTEAGKIEVAEIFMFGCPGCYMMEPRIQAWLTRKPDYVSFVRIPAPWNPPAIMHARA
                     "
BASE COUNT          261 a          517 c          512 g          240 t
ORIGIN      
        1 attccgaacg cgttcgcgac gctgggcggg cacatcgtcg tgacgagcga gctgtaccgc
       61 ctcatgccga gcgagaacgc gctcgcgatg gtgctcgcgc acgagatcgc gcacgtgaag
      121 gcgcgcgatc cgatctcggc gctcgggagc ggtgcctcac tcgcgctcgt gttcgcgttc
      181 gtgagcggcg aagccgacgg cctcgcgccg cagatcgccg ggctcgtgca actcggctat
      241 tcgcgcagcg tggaacgccg agcggatctc gaggccgtcg cggcgctgcg cgcgcattac
      301 ggtcacgccg gcggcggcgc gagcctgttc gaggtgctgg cgcagcagca cgaccccgtg
      361 agcggggccg tgccgacgtt cttatcgacg catccggccg acgccgagcg tatcgacgag
      421 ctgaagcgtg ccgccgcgga ctgggacccg tcgcggcagc cgctggcgcc cgttcgcgtg
      481 cccgcgcctc gcggcgacta gaacaactgg ccgcgaatct cacccgccgg cacagtcggc
      541 gaatggatgt tcacgtacac gctgccgttg cgaatcgcgg ccacgagctc cgaaaattcg
      601 ccggccgcga tgccttgagc ggccggaccc acgacctgcg ccgccatgat gacgccggtg
      661 atctcggccg gcgccgcggg gcacggctgc acggtcacgc cggcgggcgc gttgccgagg
      721 ttcgtgcaca ggaacacgct gatggcgccg ttcgtgtgat gctggcccaa gtgcaggtgc
      781 gattgcgtga tcgcaacccc ttcgtagctc agcgtatagg tgatcgtgcc ggcgtcctca
      841 tcgatcacgg ctcggaagga accctggccc ggcacggact gcgacggcac ctccgagtat
      901 ccgaccaaac gcgcacgcac gatttcggga cgcttgccgc ggttgtctgc ccctgccgag
      961 gcgacgagcc caagacccac gacggtcgaa gcgagcaaga aagccactga ccaacgacgt
     1021 ttcatttcga ttctcccccg gtttgcgcgt gccggccgtg acgttgcgcg ccggtccacg
     1081 cggtcgagct tgagtccggc gccgagcccg gcaggttcat tgcataatcg aggtgaagtt
     1141 ctatcgagtt cgaacgcgtc tcgttgccgc tcgaggggcc gcgcggctaa gcttcgacgg
     1201 caccctgcac taaggagcca aaggtgagag tggaagcgct gaagaccctt gcgttattgg
     1261 ccgcgaccgt cacgtggcag gtcgacgcac aaacggcagc gacgccgcca tacgaagccg
     1321 gcaagcatta caccgaggtt ccgacgccgc agccgacgag cacggaagcc ggcaagatcg
     1381 aggtcgccga gatcttcatg ttcggctgcc cgggctgtta catgatggaa ccgcggattc
     1441 aagcgtggct cacgcgcaaa cccgactacg tgagcttcgt gcgaatcccc gcgccctgga
     1501 atccacccgc gatcatgcac gcgcgcgcat
//
LOCUS       DATCUD010000219         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73246, whole genome shotgun sequence.
ACCESSION   DATCUD010000219 DATCUD010000000
VERSION     DATCUD010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73246"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VIQ99_03120"
     CDS             complement(<1..617)
                     /locus_tag="VIQ99_03120"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEY9182162.1"
                     /translation="MRAQDSRFAKGFIVAVLLAGIAAASTAVAQKLYRYKDANGVWVY
                     TDRQPGGDQTYQESQIERRFVPPEVNLLQRSTRKGIALFAQNTYFAPVQIAFRLKPIE
                     NVSAETPRDGLKVVPARSELELVVVGKAVDQVELRFDSEFQYLPGEPGALHRPEQPYR
                     LPYALSSEVRVSQAFPDMSTHTDPASQHAVDFVMPIGTDVFAARDG"
     gene            complement(722..1159)
                     /locus_tag="VIQ99_03125"
     CDS             complement(722..1159)
                     /locus_tag="VIQ99_03125"
                     /inference="COORDINATES: protein motif:HMM:NF039479.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6524 family protein"
                     /protein_id="HEY9182163.1"
                     /translation="MAAQPIGLSGIGMRFAFAFLLVAFTWNPTRFNYVEWMLAQFDAV
                     ERSNLWPLVAFAGLVLLMGWIFFLRTLASSLGTLGIVLSTGLCVIILWILFRYDIVST
                     ESTTLISWIVLILFSGILAAGMSWAHLRARWSGQATVDEVEER"
     gene            complement(1180..>2773)
                     /locus_tag="VIQ99_03130"
     CDS             complement(1180..>2773)
                     /locus_tag="VIQ99_03130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182164.1"
                     /translation="GREPLEDLDDLERVLEALPDGSQAPVRFVTFDEPQTERQRLITN
                     DRSWFPAQRCARDDEEGFWPCRALDPPPPRQPLVPSEGTTFPRQGERHVQAITPSLVL
                     VNFDMPYTVSGVADRYYYGTGLVADAERGWVVVDRNTVPVAMGDVRLTFAGSLEIPGR
                     VEYIHPLHNLAVVSYDPKLIGTTPVKSAAFVTRTLAPGDDVAVVGLGPDFRMLSQSSE
                     VANVAAAAFPLSRTLRFRDTNLDVVSLVNGPSDFDGTIVDLQGRVLGMWASFAYQSGR
                     DLTQVNLGIQADVIVDMIAKLRSGETLRSLEVEWAQMPLATARKLNLPEEWIQRYEAH
                     NPARREVLSVATIVPGTSADEFFRSGDILLSIDGELASTFRQVEQAAQRPSVEVTVFR
                     GGQEIRGTVQTAALDGLGIERVVSWAGALVQPPHRELAVQRGVDMGGVYVSFFNFGSP
                     ASRSGLFAGRRIVAVDGEATPDLDAFVRVTGALGNRQSVRLNTLTFNDVPEVITLKLD
                     PQYWPSYELVRDGYEWRRQALN"
BASE COUNT          481 a          968 c          905 g          419 t
ORIGIN      
        1 ccgtcgcgtg ccgcgaacac gtcggtaccg atcggcatca cgaaatcgac ggcgtgctgg
       61 ctcgcgggat cggtgtgcgt cgacatgtcc gggaacgcct gcgatacacg cacctcgctg
      121 gacagcgcat acggcagtcg atacggctgc tccggcctgt gcagggcgcc gggctcgccg
      181 ggcaggtact ggaactcgga gtcgaagcgc agctcgacct ggtcgacggc cttgccgacg
      241 acgacgagct ccaactcgct gcgcgcaggc acgactttca aaccgtcacg cggcgtctcg
      301 gccgagacgt tctcgatcgg cttcagccga aatgcgatct ggaccggcgc gaagtacgtg
      361 ttctgcgcga acagcgctat gcccttccgc gtggagcgct ggagcaggtt gacctcgggc
      421 ggcacgaagc gccgctcgat ctgcgattcc tgataggtct ggtcgccgcc gggctggcga
      481 tccgtgtaca cccagacgcc gttcgcgtcc ttgtaccggt acagcttctg cgcgacggcc
      541 gtcgacgcgg cggcgatgcc cgccaagagc acggcaacga tgaacccctt ggcgaaccgg
      601 gaatcctggg cgcgcatctc ggcactctat cctgcgagca cgcgtgcccg cacgacccca
      661 gtcacaaaca aagcgctcgc ggccgcgaag ccgttacgaa gtcaccataa ccgggagaag
      721 cctaccgctc ctcgacctcg tcgacggtgg cctggcccga ccaccgggcg cgcagatgcg
      781 cccacgacat ccccgccgcg agtattccgc tgaacaagat cagcacgatc cagctgatca
      841 acgtcgtgct ctcggtgctg acgatgtcgt agcggaacag gatccacagg atgatcacgc
      901 agagccccgt ggacagcacg ataccgagcg tgccgagcga cgacgccaac gtccgcagga
      961 agaagatcca ccccatcagc agcacgagcc ccgcgaacgc gacgagcggc cacaggttgc
     1021 tgcgctccac cgcgtcgaat tgcgcgagca tccattcgac gtagttgaac cgggtcggat
     1081 tccaggtgaa ggccacgagc aggaacgcga acgcgaagcg catgccgatg ccgctcaaac
     1141 cgatgggctg tgccgccacg acttccccct agccagcttt cagttcagcg cctgccggcg
     1201 ccattcgtag ccgtcgcgaa cgagctcgta gctcggccag tactgcgggt cgagcttcag
     1261 cgtgatgacc tccggcacgt cgttgaacgt caacgtgttc agccgcaccg actgccgatt
     1321 gccgagcgcg cccgtcacgc gcacgaacgc gtcgagatcc ggcgtggcct cgccgtcgac
     1381 ggccacgatg cgccgtcccg cgaacaggcc cgagcggctt gccggcgagc cgaagttgaa
     1441 gaagctcacg tagacaccgc ccatgtccac gccgcgttgc acggcgagct cgcgatgcgg
     1501 cggctgcacc agcgcgccgg cccacgagac gacccgctcg atgccgaggc cgtcgagcgc
     1561 agccgtttgc acggttccgc gaatctcttg gccgccgcga aacacggtga cctcgacgct
     1621 cggccgttgc gccgcttgct cgacctgacg gaacgtgctc gcgagctcgc cgtcgatgct
     1681 gagcaggatg tcgccggagc ggaagaactc gtcggccgac gtgcccggca cgatcgtcgc
     1741 gaccgacagc acctcgcgcc tggccggatt gtgcgcctcg tagcgctgga tccattcctc
     1801 gggcaagttc agcttgcgcg cggtcgcgag cggcatctgc gcccactcga cctcgagcga
     1861 ccgcaacgtc tcgccgctgc ggagcttcgc gatcatgtcg acgatcacgt cggcctggat
     1921 gccgagattg acctgcgtga gatcgcggcc gctctgatac gcgaagctgg cccacatgcc
     1981 gagcacgcgt ccctgtagat ccacgatcgt gccgtcgaaa tccgacgggc cgttcacgag
     2041 cgacacgacg tccaagttcg tgtcgcggaa ccgcagcgtc cgcgacagcg ggaacgcggc
     2101 cgcggccacg ttggccacct cgctcgactg cgacagcatc ctgaagtcgg gtcccaagcc
     2161 cacgacggcg acgtcgtcac cgggcgcgag ggttcgggtc acgaacgccg cgctcttgac
     2221 cggcgtggtg ccgatcaact tcgggtcgta cgagacgacc gcgaggttgt gcagcggatg
     2281 aatgtattcc acgcgccccg ggatctcgag cgagcccgcg aacgtgagcc gcacgtcgcc
     2341 catcgcgacc ggcaccgtgt tacggtcgac gacgacccac ccgcgctcgg cgtcggcgac
     2401 gagcccggtg ccgtagtagt agcgatccgc gacgccggac accgtgtacg gcatgtcgaa
     2461 attcacgagc acgagcgacg gcgtgatggc ctgcacgtgg cgttcgcctt gccgcgggaa
     2521 cgtcgtgcct tcgctcggca cgagcggttg gcgcggcggg ggcgggtcga gcgcgcggca
     2581 cggccaaaaa ccttcctcgt cgtcgcgcgc gcagcgctgc gccgggaacc agctgcgatc
     2641 gttcgtgatc aggcgctgcc gctcggtctg cggctcgtcg aacgtcacga agcggaccgg
     2701 tgcctggctg ccgtcgggca acgcctcgag cacgcgctcg agatcgtcga gatcctcgag
     2761 cggctcgcgg ccg
//
LOCUS       DATCUD010000220         2783 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44781, whole genome shotgun sequence.
ACCESSION   DATCUD010000220 DATCUD010000000
VERSION     DATCUD010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2783
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44781"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..134)
                     /locus_tag="VIQ99_03135"
     CDS             complement(<1..134)
                     /locus_tag="VIQ99_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEY9182165.1"
                     /translation="MRSHYCGQVTRELIGREVTVAGWVHRRRDHGGVIFIDLRDREGL
                     L"
     gene            complement(246..656)
                     /locus_tag="VIQ99_03140"
     CDS             complement(246..656)
                     /locus_tag="VIQ99_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018274100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HEY9182166.1"
                     /translation="MPIYEYRCAACGHHLEALQKMTEAPLRKCPDCGKSQLRRLVSAP
                     QFRLKGSGWYETDFKGDKETKRNLSGDSGEGESKSDAKPETSAKDEAKKEVAAAKTEG
                     AGDKATKPKPTTVKSAAHGKKRAVKALRTKSARA"
     gene            complement(675..>2783)
                     /gene="clpB"
                     /locus_tag="VIQ99_03145"
     CDS             complement(675..>2783)
                     /gene="clpB"
                     /locus_tag="VIQ99_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018946531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEY9182167.1"
                     /translation="YTVDLTERTEQGKLDPVIGRDEEIRRCIQILQRRTKNNPVLIGE
                     PGVGKTAIVEGLAQRIVNGQVPDGLKSKRVLSLDMGALIAGAKFRGEFEERLKGVLND
                     LAKQEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYV
                     EKDAALERRFQKVLVDEPSVEDTIAILRGLKERYAVHHKVEITDPAIVAAATLSHRYI
                     SDRQLPDKAIDLIDEAASRIRMEMDSKPEEMDRLERRLIQLKIEREALKKESDEASKR
                     RLSDLEAQIGKLEAEFADLEEVWKAEKAIVQGEAQIKEELERVRAELEKARRAQDLSR
                     MAELQYGKIPELERRLAQAQKAEREGQTKLVRNKVTDEEVAEVVSKWTGIPVAKMLEG
                     EKDKLLRMEQHLEARVVGQSEALATVSNAIRRARAGLADPNRPNGSFLFLGPTGVGKT
                     ELTKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKP
                     YSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQRIQEL
                     AGEANYARMKAEVMEIVGQHFRPEFINRVDDVVVFHPLEAEHIRRIVDIQLEYLRRRL
                     GEREIALVLDPSARDRLAQAGFDPVYGARPLKRAIQQQLENPLAQRILRGDFGPGDTI
                     RVVAEGDALGFTKGVADKAA"
BASE COUNT          423 a          947 c          858 g          555 t
ORIGIN      
        1 agcagtccct cgcggtcgcg caggtcgatg aagatcacgc cgccgtgatc gcgacggcgg
       61 tgcacccagc ccgccacggt cacttcacgg ccgatcagct cgcgggtcac ttggccgcag
      121 taatgactgc gcatcggtcg agtccttcga gcctaaccct ttgaataaaa aggtggcttt
      181 agccttcgag aggccgcgat gttacgggga agcagcgggg cgcgcaagcg cgcgcgagcc
      241 ttgtatcaag cgcgcgcgga cttggtccta agcgctttca ccgcgcgttt cttgccgtgc
      301 gcagcgctct tgacggtggt cggcttcggc ttcgtggctt tgtctcccgc gccctcggtc
      361 ttggccgcgg caacttcctt cttggcttcg tccttggccg acgtctccgg cttggcgtcg
      421 ctcttcgact cgccctcacc ggaatcgccg gacaggttgc gcttcgtttc tttgtcgccc
      481 ttgaagtcgg tctcgtacca gccgctgccc ttcaggcgaa attgcggcgc ggacacgagc
      541 ctgcgcagct gcgacttgcc gcaatccggg cacttgcgca gcggcgcttc ggtcattttc
      601 tgcaaagctt cgagatggtg cccgcaggca gcgcatcgat actcgtaaat cggcatccga
      661 aaactctcgt cacctcaagc ggccttgtcg gcgacgccct tcgtgaagcc gagcgcgtcg
      721 ccttcggcaa cgacgcggat cgtgtcgccg gggccgaagt cgccgcgcag aatacgctgc
      781 gcgagcggat tctccaattg ctgctggatc gcacgcttca acggccgcgc cccgtacacg
      841 gggtcgaagc cggcctgggc caagcgatca cgggccgacg gatcgagcac gagcgcgatc
      901 tcgcgctcgc cgagccggcg gcgcaagtac tcgagctgga tgtcgacgat gcggcggatg
      961 tgctcggcct cgagcgggtg gaatacgacg acgtcgtcga cgcggttgat gaactcgggc
     1021 cggaagtgct ggccgacgat ttccatgact tcggccttca tgcgggcgta gttcgcctcg
     1081 cccgccagct cctggattcg ctggctgccg agattcgagg tcatgacgat cacggtgttg
     1141 cggaaatcga cggtgcggcc ctggccgtcc gtgagccggc cgtcgtcgag cacctgcaac
     1201 agcacgttga acacgtcggg atgtgccttc tcgacctcgt cgagcaatac gacagaatac
     1261 ggcttgcgac gcacggcctc ggtcaggtaa ccgccttcct cgtagccgac gtaaccgggc
     1321 ggcgcgccga tcagccgcgc aaccgagtgt ttctccatga actccgacat gtcgatgcgg
     1381 accatggcct cttcggtatc gaacaggaac gacgcgagcg ccttcgtgag ctcggtcttg
     1441 ccgacgccgg tcggccccaa gaacaggaac gagccgttcg gccgattggg atcggcgagg
     1501 cccgcgcgag cgcggcgaat cgcgttcgac accgtcgcga gcgcctcgct ctggccgacg
     1561 actcgcgcct cgaggtgctg ctccatgcgc agcagcttgt ccttctcgcc ctcgagcatc
     1621 ttcgcgaccg ggatgccggt ccacttcgag acgacctcgg cgacctcctc atctgtgacc
     1681 ttgttgcgca ccaatttcgt ctggccttcg cgctcggcct tctgcgcctg cgccagacgc
     1741 cgctcgagct cggggatctt gccgtactga agctcggcca tgcgcgaaag atcctgcgcg
     1801 cggcgcgcct tctcgagctc cgcacgcacg cgctcgagct cttccttgat ctgcgcctcg
     1861 ccttgcacga tggccttctc ggccttccag acctcctcga gatcggcgaa ctcggcctcg
     1921 agcttgccga tctgcgcttc gaggtcggag agacggcgct tcgaggcctc gtcggactcc
     1981 ttcttcaatg cctcgcgctc gatcttgagc tgaatcagcc ggcgctcgag acgatccatc
     2041 tcctccggct tcgaatccat ctccatccgg atccgcgacg cggcttcgtc gatcaggtcg
     2101 atggccttgt ccggcagctg ccggtcgctg atgtaacggt gcgacagcgt cgcagcggcg
     2161 acgatcgccg ggtccgtgat ctcgaccttg tgatgcacgg cgtagcgctc cttcaagccg
     2221 cgcaggatcg cgatcgtatc ctcgacggac ggctcgtcca cgaggacctt ctgaaaacgc
     2281 cgctcgagcg ccgcgtcctt ctcgacgtac ttacgatatt cgtcgagcgt cgtcgcaccg
     2341 acgcagtgca gctcgccgcg cgcgagcgcc ggtttcaaca tgttgccggc atccatggcg
     2401 ccctcggctt tgccggcgcc aaccatcgtg tgcagctcgt cgatgaacag gatgacctgt
     2461 ccttcctgct tcgcgaggtc gttcaacacg cccttcaggc gctcttcgaa ctcgccgcgg
     2521 aacttcgcgc cggcgatcaa cgcgcccatg tcgagcgaca gcacgcgctt cgatttcaag
     2581 ccgtctggca cttggccgtt cacgatccgc tgcgcgagac cttcgacgat cgcggtcttg
     2641 ccgacgccgg gctcgccgat cagcaccggg ttgttcttgg tgcggcgttg caggatctgg
     2701 atgcagcggc gaatctcctc gtcacgcccg atcaccggat cgagcttgcc ctgttcggtg
     2761 cgctcggtga gatcgacggt gta
//
LOCUS       DATCUD010000221         2590 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_58923, whole genome shotgun sequence.
ACCESSION   DATCUD010000221 DATCUD010000000
VERSION     DATCUD010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58923"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1421)
                     /locus_tag="VIQ99_03150"
     CDS             complement(45..1421)
                     /locus_tag="VIQ99_03150"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182168.1"
                     /translation="MHSKSGIGALGLLAVAAFALLHAPVTSQNVDSLEAVAARAATLE
                     REIGLLEDLNAIKRLQRVYGFYTDKQLWTAAADLFAADGTIEVGGRGVYAGRQRVLEF
                     LRSNGPEFPQPKRLFDHMQLQPIVTVAADGRTAKGRWHVFAQEAVHGEYANWGLGVLE
                     NDYVKEDGIWKISRHHFFTTMYTPYEAGWGKQAIPNAGPSTELPPDRPPSVEYEAYPA
                     VFVVPFHYENPVAGARETPAVPAAMGGVDATTIESGLAELERRIGLLEDVTQLERMNS
                     IYGYYLAHLQWDDLAGIFAPNGTIEIAMRGVYAGQASVRRNLNLYGLATDPQFGLQHN
                     HMQFQPVITLAPDGQSALMRSRALSIMGQWERYSQWMGGTYENEYVKENGVWKIAKDQ
                     VFNTYFVPYAVGWKDAQPRPPPGITATNPPDSPPTLPFEMYPSAFLPPFHYVHPVTGR
                     AVTWAPPQ"
     gene            complement(1432..2157)
                     /locus_tag="VIQ99_03155"
     CDS             complement(1432..2157)
                     /locus_tag="VIQ99_03155"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182169.1"
                     /translation="MSRSRVALSCCTLTSLMLGACGSGPSSVETARLAALTERIAGLE
                     QRKSLVEDANEIERLQHAYGYYVDRGLWDEVANLFADDGTIEIGLDGVYVGKQRVREY
                     LYALGQGRQGLQAGELNEHLQVMPVITVAPDGRTAKARWRAITLTGRYGGEAFWGEGP
                     YENEYVKDDGVWKIKTLHWYQALYVPYEKGWQTQPDPTKGVHASARLPPDRPPSVDYK
                     TWPDTYVPPFSFPNPVGKYVASE"
     gene            complement(2224..>2590)
                     /locus_tag="VIQ99_03160"
     CDS             complement(2224..>2590)
                     /locus_tag="VIQ99_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010033426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HEY9182170.1"
                     /translation="FGGRMASHAVLDRDLPAEGLVFCSFPLHMPRKPAIKRAAHLAAI
                     ARPMLFLSGTRDELAKRELLEPLVRSLPNAKLHWLETADHGYRVLKRTRTSTESVFDE
                     MARVARAFMTDDRTIASTG"
BASE COUNT          428 a          887 c          812 g          463 t
ORIGIN      
        1 cggcgcagct gcgcgccgtg cggggatcat actctcacgg atggtcactg cggcggagcc
       61 cacgtgaccg ctcgccccgt tacgggatgt acgtagtgaa atggcggcag gaacgcgctc
      121 ggatacatct cgaacggcag agtcggtggc gagtccggcg ggttcgtggc cgtgatcccg
      181 ggaggcggcc ggggctgcgc gtccttccaa ccgaccgcat acgggacgaa atacgtgttg
      241 aacacctggt ccttggcgat cttccacacg ccgttctctt tgacgtactc gttctcgtac
      301 gtcccgccca tccactgact gtagcgctcc cactggccca tgatgctgag cgcacgcgag
      361 cgcatgagcg cgctctgccc atccggcgcc agcgtgatca cgggctggaa ttgcatgtgg
      421 ttgtgctgca agccgaactg cgggtcggtc gccaaaccgt agagattcag gttgcggcgc
      481 acgctcgcct ggcccgcgta aacgccgcgc atcgcaatct cgatcgtgcc gttcggcgcg
      541 aagatgcccg cgaggtcgtc ccactgcagg tgcgccaggt agtacccgta gatcgagttc
      601 atgcgctcga gctgcgtgac gtcctcgagc agaccgatac ggcgctcgag ctcggcgaga
      661 ccgctctcga tggtcgtggc atcgacaccg cccatcgcgg cggggacagc gggcgtctcg
      721 cgcgcgccag ctacggggtt ttcgtagtga aacggcacga cgaacaccgc cggatacgcc
      781 tcgtactcga cgctcggcgg ccggtccggt ggcagctcgg tggaagggcc ggcgttcgga
      841 atcgcttgct tgccccatcc cgcctcgtac ggcgtgtaca tcgtcgtgaa gaagtgatga
      901 cggctgatct tccagatgcc gtcctccttc acgtagtcgt tctcgagcac tcccaagccc
      961 cagttcgcgt actcaccgtg cacggcttcc tgcgcgaaca cgtgccaacg gcccttcgcc
     1021 gtgcgaccgt cggccgcaac cgtcacgatc ggctgcagtt gcatgtggtc gaacaggcgc
     1081 ttcggctgcg ggaactccgg tccgttcgag cgcaggaact cgagcacgcg ctgtcgaccg
     1141 gcgtagacgc cgcgtccacc cacctcgatc gtgccgtcgg cggcgaacaa gtccgcggcc
     1201 gcggtccaga gctgcttgtc cgtgtagaaa ccatagacgc gctgcagcct cttgatcgca
     1261 ttcaagtcct cgagcaggcc gatctcgcgc tcgagcgtgg ccgcgcgcgc ggccacggcc
     1321 tcgagcgaat cgacgttctg agacgtgacg ggcgcgtgta acaatgcgaa cgcggccact
     1381 gcgagaagac ccagggcgcc gataccgctc ttgctgtgca tggccacccc cctactcgct
     1441 cgcgacgtat ttgccgacgg gattcgggaa actgaacggc ggcacgtacg tgtcgggcca
     1501 ggtcttgtaa tcgaccgatg gcggccgatc gggcggcagc ctagcggacg cgtgcacacc
     1561 cttcgtcgga tccggttgcg tctgccaacc tttctcgtag ggcacgtaga gcgcttgata
     1621 ccagtgcagc gtcttgatct tccagacgcc gtcgtccttc acatactcgt tctcgtacgg
     1681 tccttcgccc cagaaagcct caccaccgta ccggccggtc agcgtgatcg cgcgccagcg
     1741 cgcctttgcc gttcgcccgt ccggcgcgac cgtgatcacg ggcatcacct gcaaatgctc
     1801 gttcagctcg ccggcctgca agccctgccg gccctgcccg agcgcgtata ggtattcgcg
     1861 aacacgttgc ttgccgacat agacgccgtc gagcccgatt tcgatcgtgc cgtcgtccgc
     1921 gaataggttc gcgacctcat cccacagccc gcgatcgacg tagtacccgt aagcgtgctg
     1981 gagccgttcg atctcgttcg catcctcgac cagcgactta cgctgctcga gtcctgcgat
     2041 ccgctcggtc aacgccgcga ggcgcgccgt ctctacggag ctcgggccac taccgcaagc
     2101 gccgagcatc aaggacgtca acgtgcagca ggatagtgcg actcgcgatc tcgacatgct
     2161 gacccccaag gcggcgccgc gggcctaaag tccggcgcgc tcgagccgcc gattctccgc
     2221 cggctatcca gtgcttgcaa tcgtgcggtc gtccgtcatg aacgcgcgtg cgacgcgcgc
     2281 catctcgtcg aacacgctct cggtgctcgt acgcgtgcgc ttcagcacgc ggtagccgtg
     2341 gtcggccgtc tcgagccagt gcagcttcgc attcggcaac gagcgcacga gcggctcgag
     2401 caactcgcgc tttgccagct cgtcgcgcgt gccggacaga aacagcatcg gccttgcgat
     2461 tgcggcgaga tgcgcggcac gcttgatcgc gggcttccgc ggcatgtgca gcgggaatga
     2521 gcaaaacacc agcccctcgg cgggaaggtc gcgatcgagc accgcgtgcg acgccatgcg
     2581 accaccgaac
//
LOCUS       DATCUD010000222         1688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_44792, whole genome shotgun sequence.
ACCESSION   DATCUD010000222 DATCUD010000000
VERSION     DATCUD010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44792"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..365
                     /locus_tag="VIQ99_03165"
     CDS             <1..365
                     /locus_tag="VIQ99_03165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182171.1"
                     /translation="YGFEFNQVDTYTLTGKVGDELKLAVQVQQTAMPQTLTFEEEGIE
                     LSLESFRMNATGEVIANLNALEANAQGSGESSGVIDVKTAEGSEKVEIDRAFQVRMTV
                     TYDLPKSAAAAVADEVSE"
     gene            complement(377..>1688)
                     /locus_tag="VIQ99_03170"
     CDS             complement(377..>1688)
                     /locus_tag="VIQ99_03170"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylserine/phosphatidylglycerophosphate/
                     cardiolipin synthase family protein"
                     /protein_id="HEY9182172.1"
                     /translation="QAARLIRDRDRANPLDWRLDQTTESRLVPGNSFRAELDNEQARR
                     RLFEAFDEARATIHIQLYIVRPSDFTEELIVKLIQRARAGVKVRFMVDALYSDEEVFG
                     RLNPLIASLRQEGHIEVVAVHPIEPYKGVGVTTLKKRDHRKLVIIDGRRAFVSGRNAG
                     DEYYTGFGELPVHDNTRHERIPWLDAHVEVSGPLVREVQETFMETWHDYGGTTIDPEA
                     DVLPELEPCGTAAGRLVVHRGLADTNGLAMYESMFDVAEHHVYIVNDFPIVPALERAI
                     YRLLARDVTVKLLTGSAATRRDDGTFFPAPLHRTLFEYMVKAKLEPLLQAGVEVYEFV
                     PPPSPRIVARGGRIRPYVHAKLVSVDGVATSIGSANLDATASFWESEANIVVQDPEFA
                     RGVETTLQRLIDGSIALDPESEYWKRERAQRAVVATLWPGTFYS"
BASE COUNT          319 a          524 c          534 g          311 t
ORIGIN      
        1 tctatggttt cgagttcaat caggtcgaca cctacacctt gaccggcaag gtcggtgatg
       61 agctcaagct cgcagttcag gtccagcaga cggcgatgcc ccagaccttg accttcgagg
      121 aagaagggat cgagctttcg ctcgaatcct tcaggatgaa cgccacgggc gaagtcatcg
      181 ccaatctcaa cgctctcgag gcgaatgccc aagggagcgg tgagtcgtcg ggcgtcatcg
      241 acgtcaagac ggcggagggc tcggagaagg tggagatcga tcgcgcgttt caggttcgga
      301 tgaccgtgac ctacgatctg cccaagtccg ctgccgccgc ggttgccgac gaagtctccg
      361 agtaaacgcg gccccctcag gaatagaacg tccccggcca aagcgtggcc acgacggcac
      421 gttgtgctcg ctcccgtttc caatactcgg attcgggatc gagcgcgatg ctgccgtcga
      481 tgagcctttg gagcgtggtt tcgacgcccc gcgcgaactc cggatcttgc acgacgatgt
      541 tggcttcgct ctcccagaag ctcgcggtcg catcgagatt ggccgatcca atgctggtcg
      601 ccactccatc gaccgacacg agcttggcat gtacgtacgg gcgaatgcgc ccgccacgcg
      661 cgacgatccg tggagacggt gggggcacga actcgtacac ctcgacgccg gcctgaagca
      721 gcggctcgag cttcgccttc accatgtact cgaagagcgt gcgatggagc ggggccggga
      781 aaaacgtgcc gtcgtcacgc cgcgtggcag cgctgccggt caagagcttg acggtgacgt
      841 ctctggccaa gaggcgatag attgcacgct cgagggcggg cacgatgggg aagtcgttga
      901 cgatgtagac gtggtgctcg gccacgtcga acatcgactc gtacatcgcg aggccgttgg
      961 tatcggcgag gccgcggtgc acgaccaacc ggccggctgc ggtgccgcac ggctcgagct
     1021 ccggcaacac gtcggcctca gggtcaatcg tggttccgcc gtagtcgtgc cacgtttcca
     1081 tgaaagtctc ctgcacctcg cgcaccagag gtcccgacac ctccacgtgc gcgtccaacc
     1141 acggaatccg ctcgtgccgg gtgttgtcgt ggacaggcaa ctcgccaaag cccgtgtagt
     1201 actcgtctcc ggcgtttcgg cccgacacga aggcgcgacg cccgtcgatg atgacgagct
     1261 tgcgatggtc gcgtttcttc aaagtggtca caccaacccc cttgtagggc tcgatcgggt
     1321 ggaccgcgac gacttcaatg tgaccttctt gccgcaacga cgcgatcaac ggattgaggc
     1381 gcccgaagac ttcctcgtcg gaatagagcg catcgaccat gaaacgaacc ttcaccccag
     1441 cgcgcgcgcg ctggatgagc ttcacgatca attcctcggt gaagtcgctc ggccggacga
     1501 tgtagagctg gatgtgaatc gtggcccttg cctcatcgaa cgcctcgaag aggcgcctac
     1561 gcgcctgctc gttgtcgagc tcggcacgaa aggagttgcc cgggacgagg cgcgactcgg
     1621 tggtttgatc gagcctccaa tcgagcgggt tggctctgtc tcggtcccgg atcaatcgag
     1681 cggcctgc
//
LOCUS       DATCUD010000223         1871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16512, whole genome shotgun sequence.
ACCESSION   DATCUD010000223 DATCUD010000000
VERSION     DATCUD010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16512"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(104..1651)
                     /locus_tag="VIQ99_03175"
     CDS             complement(104..1651)
                     /locus_tag="VIQ99_03175"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182173.1"
                     /translation="MTLAAVIADAAAEADYETIADAAMNGDTTAVRTFLARRADVNAL
                     GAYDTPALHWVVRLQDRVIAGLLLDAGADPNLPNPHGIVPLHLAIENLDRDMVDLLLA
                     AGADPRARDAAGETPLFLAARAGAATIAERLLASGAPVDERDSEYGQTALMVAVREGH
                     VETARLLLANGAYPNARTLAGAVPSFRLPGDNAGSKGVGIIRGGWPERGMRAPTPGAK
                     TPLLYATRRGNLTITRMLIEAGAAIDQPDADGVTPLLTAILNASIDATPSAPSDGEHL
                     AVARYLLERGANVNATDWYGQTPLWAAVDVRNLDVNGPEKDNRMDRAAALDLIRALLA
                     RGADPNARVHEYPPERRFITGLGSLSWVDFTGQTPFLRAALAGDVAVMNLLLEHHADP
                     AIATFGGTTPLMAAAGVNWVVNQTFDEGPDALLAAVELCYAAGNDVNAVNSMGLGAVH
                     GAANRGSNDILVFLAAHGAQLDTPDAQGRTPLAWAEGVFLATHPPQRKPETIALLERL
                     LHGPKQP"
BASE COUNT          287 a          616 c          650 g          318 t
ORIGIN      
        1 gattcgttgt gcgtctcgtc ttttgtgtcg ccatccagtc ggctcgtcca gcaaggcggc
       61 gcgatcttgt ccgaagcata ccgtgcatgc aaggtcgacg ctctcaaggt tgtttgggtc
      121 catggagcag tcgctcgagc aacgcgatgg tttcgggctt gcgctgcgga ggatgagtcg
      181 cgagaaatac gccttccgcc cacgcgagcg gcgtgcgacc ctgcgcgtcg ggtgtgtcga
      241 gctgggcgcc gtgcgcggcc agaaacacga ggatgtcgtt cgagccgcgg ttcgctgcgc
      301 cgtgcacggc gccgaggccc atcgagttca cagcgttcac gtcattgccg gccgcatagc
      361 aaagctcgac ggcggccagt agggcgtcgg gtccctcgtc gaaggtctga ttcacgaccc
      421 agttgacgcc ggccgccgcc atcagcggcg tcgtcccacc gaacgtcgcg atcgcgggat
      481 ctgcgtggtg ctccaacaag agattcatga cggccacgtc tccggcgagc gcggcgcgca
      541 ggaacggcgt ttgtcccgtg aagtcgaccc aagacaacga gcccaacccc gttatgaacc
      601 gccgctcggg tgggtattcg tgcacgcgcg cattcgggtc tgcgccgcgc gccaaaaggg
      661 cacggatcag gtcgagcgcg gcggcgcgat ccatgcggtt gtccttctcc ggcccgttca
      721 catcgaggtt gcggacgtcg acggccgccc agagaggcgt ttggccgtac cagtccgtgg
      781 cgttcacgtt ggcgccgcgc tcgagcaagt accgcgcgac ggccaaatgc tcaccgtccg
      841 aaggcgcaga gggggtcgcg tcgatgctcg cgttcaggat cgccgtcagc agcggcgtga
      901 caccgtcggc atccggttga tcgatcgcgg cgccggcctc gatcagcatc cgtgtgatcg
      961 tgaggttgcc gcgccgcgtt gcataaagca gcggcgtctt ggcgccgggc gtgggtgccc
     1021 gcatgccgcg ttccggccaa ccgccgcgaa tgattccaac gcccttcgag cccgcgttgt
     1081 cgccgggcaa acgaaacgag ggcaccgctc ccgccagagt gcgggcgttc gggtatgcgc
     1141 cgttggcgag tagcaaccgt gcggtttcga cgtggccttc tcggaccgcg accatcagcg
     1201 cggtttgccc gtactcgctg tcgcgctcat ccacgggggc gccgctcgca agcaaccgtt
     1261 cggcgatcgt cgcggcgccg gcgcgtgccg cgagaaatag cggagtctcg cccgcggcat
     1321 cccgcgcgcg cgggtccgcg ccggcggcca gcagcagatc gaccatgtcg cgatccaggt
     1381 tttcgatggc gagatgcagt ggaacgatgc catgtggatt cggcaagttc ggatcggcgc
     1441 ctgcatcgag cagcaggcct gcgataacac gatcctggag gcgcacgacc caatgcagcg
     1501 cgggcgtgtc gtaggctccg agcgcgttga cgtcggcccg acgcgccagg aacgtgcgga
     1561 ccgctgtcgt gtcgccgttc atggcggcat cggcgatggt ctcgtaatcg gcctcggccg
     1621 cggcgtcagc gatcactgcc gccagcgtca cgagggtcca gattcgccaa tggcggcgcg
     1681 actgtgtcgc ggcctgtgga cggcgcattt ggcgagcacg catcgcgtcg acgttcacag
     1741 ggttacgacg ccggtactgt cgccgaacga cgcggccggg acattcagct tctcgagcaa
     1801 cgcgacgagg aggttcgcca tcggcgtgcc ggtgcccgcc cggatgtggc gcccgcccgc
     1861 gacggctccc g
//
LOCUS       DATCUD010000224         4634 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37736, whole genome shotgun sequence.
ACCESSION   DATCUD010000224 DATCUD010000000
VERSION     DATCUD010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4634)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4634)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4634
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37736"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..594)
                     /gene="ilvN"
                     /locus_tag="VIQ99_03180"
     CDS             complement(94..594)
                     /gene="ilvN"
                     /locus_tag="VIQ99_03180"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEY9182174.1"
                     /translation="MRHIISILLQNEAGALSRVANLFSSRGYNIESLNVAPTADETVS
                     RLTLVTTGSETVIDQIEKQLGKLVDVVDIADMTRSDHIERELALFKAQLANGAAQRLK
                     DVLEQFGARLLSEAQGHCTIELVGGSQDIDRFLKRLATVADTVTLVRSGAMAVMRGAP
                     AAGKRS"
     gene            729..2582
                     /gene="ilvB"
                     /locus_tag="VIQ99_03185"
     CDS             729..2582
                     /gene="ilvB"
                     /locus_tag="VIQ99_03185"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005948 - acetolactate synthase complex
                     [Evidence IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEY9182175.1"
                     /translation="MDTLTQPKIMRSHPLAGATMSGADIVVQVLADEGVDTIFGYSGG
                     AILPTYDAVFRYNQANGKGGIEPMPLIVPANEQGAGFMAAGYARASGRVGVVLVTSGP
                     GATNCVTPVRDCMADSIPIVVICGQVPTSAIGSDAFQEAPVTAVMGSVAKHVFLVTDP
                     LRLEATMRTAFEIARTGRPGPVVVDIPKDVQNWQGTFVGEGRLPIPGYRQRLAAVEDN
                     RLTDADCERFFSLLGESRRPLIYAGGGVINGHASAALRGFAHSFQIPVASTLMGLGGF
                     DTTHPLSLHMLGMHGTASANYAADDCDLLIAIGARFDDRVAGVPAKFAPKAKHVLHFD
                     IDPSEIHKVKKADWFHVGLLPAALDTLVAYGRRTGFGTKLERWHEEIAALKATYGLNY
                     DRESPLVQPQYVMETMNRITQGEAIISSGVGQHQMWAAQYCDFREPRLWLTSGSMGTM
                     GFGLPAAIGAQLANPGKLVIDVDGDASIRMNLGELETVTTYGLPIKIVVLNNFGDGMV
                     MQWQRLFFKGRLSASDKSLRKKDFIKTAQADGFAFAKRIDAKHDVPRVLDEFLSTRGP
                     AFLEVIIDPTAGVYPMVGPGLSYREMITGDFIPNRYASLGATATPDKSEMF"
     gene            2594..2989
                     /locus_tag="VIQ99_03190"
     CDS             2594..2989
                     /locus_tag="VIQ99_03190"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182176.1"
                     /translation="MRELASVFLGVTIAVGSVPAAAHHSFAIYDMQQNVEFHGVIETV
                     KLRNPHMAMTLTVKGENGEEKTIDFVEGAPANMLARLGLRPEMIPPGQEITAIGAPRR
                     DNPDAWFLKAIILPDGTRFNALQSPNQER"
     gene            complement(3000..4256)
                     /locus_tag="VIQ99_03195"
     CDS             complement(3000..4256)
                     /locus_tag="VIQ99_03195"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEY9182177.1"
                     /translation="MTLSHLWLPYRQMLTAPQPHVVERTDGVRIHLADGRVLIDGVAS
                     WWTACHGYNHPHIRAAVAAQLARMPHVMLGGLAHAPAATLAARLAALLPGDLDHVFFS
                     ESGSVAVEIAMKIALQYRFNRGERKRTRFVSFRHGYHGDTFAAMSICDPEEGMHAAFG
                     AVLPGQLVVPLPEGEDLARDVECTVAAHAGELTAVIVEPLVQAAGGMKFHSAETLASI
                     AATARRFDLLLILDEIATGFGRTGTLFACEQAGVTPDIVTLSKALTGGTLPLAATIAR
                     TPVYEAFLSEDASRALMHGPTFSGNPLGCAAANASLDLFATEPRLKQVAAIEAQLEEG
                     LADCRRLAGVREVRVKGAIGVVQLERPPNLEALRARFVNHGVWIRPFGDVVYLMPPLV
                     IGEADLGALVRAVHGVLDEAARAGEL"
     gene            4335..>4634
                     /locus_tag="VIQ99_03200"
     CDS             4335..>4634
                     /locus_tag="VIQ99_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001397473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase"
                     /protein_id="HEY9182178.1"
                     /translation="MKKITCFKAYDVRGRVPEDLDEDIAYRIGRGYAAFVKPRTVAVG
                     RDIRASSPALTAALTRGLTDSGVDVLDIGVGGTELAYFATFSRKLDGGIMVTASHN"
BASE COUNT          828 a         1517 c         1506 g          783 t
ORIGIN      
        1 cgatcttgat gacgactcta cgcgcgttgg ctagacgttc ggcgtgggtc gcgtacgctg
       61 caatgctcat gggcccgtcc gcgccggcgt ggactagctc cgcttgccgg cggcaggcgc
      121 accgcgcatg accgccatcg caccgctgcg aacgagcgtg accgtgtcgg caacggtggc
      181 caagcgcttc aggaaccgat cgatgtcctg gcttcccccg acgagctcga tcgtgcagtg
      241 gccttgggct tcgctcaaca gccgcgcgcc gaattgctcg agaacgtcct tgagtctctg
      301 cgcggcgcca ttcgcgagct gcgccttgaa caacgcgagc tcgcgctcga tgtggtcgga
      361 cctcgtcatg tcggcgatgt cgacgacgtc gacgagcttg ccgagttgtt tctcgatctg
      421 atcgatcacg gtttcggatc ccgtggtcac gagggtcaag cgcgaaacag tctcgtctgc
      481 ggtcggtgcg acgttcaagc tctcgatgtt gtagccgcgc gatgagaaca aattcgcgac
      541 gcgtgagaga gcacccgcct cgttctgtag gagtatcgaa atgatatgtc gcatggtgaa
      601 cggccccacg gccgcgcgga gcgtgccatg ttggcgtagt ggcgtggcta ttgcaatgca
      661 ggtccttttc gtcaaaactc gaatgaatta gcggctttca gcccgttttc tgccctcggc
      721 aaccgatcat ggataccctc acgcagccca agatcatgcg ctcgcacccg ttggccggtg
      781 ccacgatgag cggcgcggac atcgtcgtcc aagtgctggc tgacgaaggc gtagacacga
      841 tcttcggtta cagcggcggc gcgatcttgc cgacctacga cgccgtgttc cgctacaacc
      901 aagcgaacgg caagggcggc atcgagccga tgcccctgat cgtgcctgcg aacgagcaag
      961 gtgcaggttt catggccgcc ggttacgccc gcgccagcgg ccgcgtcgga gtggtgttgg
     1021 tcacgtcggg ccccggcgcg acgaactgcg tgacgcccgt gcgcgattgc atggcggact
     1081 cgatcccgat cgtcgtgatc tgcggtcaag tgccgacgag cgcgatcggc agcgatgcgt
     1141 tccaggaggc gccggtcacg gccgtcatgg gctccgttgc gaagcacgtg ttcctcgtca
     1201 cggatccgct gcggctcgaa gccacgatgc ggaccgcgtt cgagatcgcg cgcacggggc
     1261 ggccgggacc cgtggtcgtc gatattccaa aggacgtgca gaactggcag ggcacgttcg
     1321 tcggcgaggg ccggttgccg attcccggat accgccaacg actcgcggcc gtcgaggaca
     1381 accggctgac ggacgcggac tgcgagcggt tcttctcgct cttgggcgag agccggcgtc
     1441 cgctgatcta cgcaggcggc ggcgtcatca acggccacgc gagcgcggcg ctacgcggct
     1501 tcgcgcatag cttccagatc cccgtcgcaa gcactctcat gggcctcggc ggcttcgata
     1561 cgacgcatcc gctatcgctg cacatgctcg gcatgcacgg cacggccagc gcgaactatg
     1621 ccgctgacga ctgcgacttg ttgatcgcaa tcggcgcacg cttcgacgat cgtgtggccg
     1681 gcgtgccggc caagttcgcg cccaaagcga agcacgtcct gcatttcgac atcgacccgt
     1741 cggagattca caaagtcaag aaggccgact ggttccatgt cggcctgctg ccggcggcgc
     1801 tcgacacgct cgtggcctac gggcggcgca cgggcttcgg cacgaagctc gagcgctggc
     1861 acgaggagat cgccgcgctc aaggccacct acggcctgaa ctatgaccgc gagagccctc
     1921 tcgtccagcc gcagtacgtc atggagacga tgaatcgcat cacgcaaggc gaagcgatca
     1981 tctcgagcgg cgtgggccag caccagatgt gggccgcgca gtattgcgac ttccgggagc
     2041 cgcgcctgtg gctcacgtcc ggcagcatgg gcaccatggg gttcgggctg ccggccgcga
     2101 tcggcgccca gctcgcgaac cccggcaagc tcgtcatcga cgtggacggc gatgcgagca
     2161 ttcgcatgaa cttgggcgag ctcgagacgg tcaccaccta cggcttgccg atcaagatag
     2221 tcgtgctcaa caacttcggc gacggaatgg tcatgcaatg gcagcggctg ttcttcaagg
     2281 gccgtctgtc cgcgagcgac aagtcgctac gcaagaaaga tttcatcaag accgcccagg
     2341 ccgacggctt tgccttcgcg aaacgcatcg acgcgaagca cgacgtgccg cgcgtgctcg
     2401 acgagttctt gagcacacgg ggtccggcgt ttctcgaggt catcatcgat ccgaccgcgg
     2461 gcgtgtatcc gatggtcggg cccggcctct cgtatcgtga gatgatcacg ggcgacttca
     2521 taccgaatag gtacgcgtcg ctcggcgcca cggcgacgcc ggacaaatcg gaaatgttct
     2581 gaggttgcgc agcatgagag aactggcctc cgtatttcta ggcgtcacga tcgcagtcgg
     2641 ctccgtgccg gcggcggcgc atcattcgtt tgcgatctac gacatgcagc agaacgtcga
     2701 atttcacggc gtcatcgaga ccgtgaagct gcggaatccg cacatggcga tgacgctgac
     2761 ggtcaaaggc gaaaacggcg aagaaaagac catcgacttc gtcgaaggcg cgccggcgaa
     2821 catgctcgct cgcttggggt tacgaccgga aatgattccc ccgggccaag agatcacggc
     2881 catcggcgca ccgcgccgcg acaatccgga cgcatggttc ttgaaggcga tcatccttcc
     2941 ggacgggacg cgcttcaacg cgctgcagag cccgaatcaa gagcgctgag actctcgggc
     3001 tacagctctc cggccctcgc ggcttcgtcc agcacgccgt gaaccgcgcg cacgagcgcg
     3061 cccaggtccg cctcgccgat cacgagcggc ggcatcaagt agacgacgtc gccgaacggc
     3121 ctgatccata cgccgtggtt cacgaaccgc gcgcgcagcg cctcgaggtt cggcggacgt
     3181 tcgagctgca cgacgccgat cgcgcctttg acccgaacct cgcggactcc ggccaatcgc
     3241 ctgcagtccg ccagcccttc ctcgagctgc gcttcgatcg cggccacctg cttcaggcgc
     3301 ggctcggtcg cgaacaagtc gagtgacgcg ttcgcggccg cacagccgag cggattgccc
     3361 gagaacgtgg gcccgtgcat cagcgcacgc gatgcgtctt cggacaggaa cgcttcatag
     3421 accggtgtgc gcgcgatcgt ggccgcgagc ggcagcgtgc cgcccgtcag cgccttcgac
     3481 aacgtgacga tgtccggcgt aacgccggcc tgctcgcagg cgaacagcgt gccggtacgc
     3541 ccgaaacccg tcgcaatctc gtcgaggatc aacaacagat cgaaccgccg cgccgtcgcg
     3601 gcgatcgacg cgagcgtctc ggccgagtgg aacttcatgc cgccggccgc ctgaaccagc
     3661 ggctcgacga tcacggccgt gagctcgccg gcgtgtgcag cgaccgtgca ctcgacgtct
     3721 cgcgcaaggt cctcgccctc cggtaacggc acgaccagtt gcccgggcag cacggccccg
     3781 aacgcggcgt gcatgccctc ctcggggtcg cagatcgaca tcgcggcaaa cgtatcgccg
     3841 tgatagccgt gacggaagct cacgaagcgc gtgcgcttcc gctcaccgcg attgaagcgg
     3901 tattgcagcg cgatcttcat cgcgatctcg acggccacgg atcccgattc ggagaagaac
     3961 acgtggtcga ggtcgcccgg cagcagcgcc gcgaggcgcg ccgcgagcgt cgcggccggc
     4021 gcgtgcgcga ggcctccgag catcacgtgc ggcatccgcg cgagctgagc cgcgaccgcc
     4081 gcgcggatgt gcgggtggtt gtagccgtgg cacgccgtcc accacgacgc gacgccgtcg
     4141 atcagcacgc ggccgtcggc gagatggatc cgcacgccgt ccgtgcgttc cacgacgtgc
     4201 ggttgcggcg ctgtaagcat ttgccgatat ggcagccaga gatggctcaa ggtcataacg
     4261 cctgagaaac ggaagctggc atcattacac agttactcga gtcccaaggc ttcacgctcc
     4321 cgagcaggtc gacgatgaaa aagatcacgt gcttcaaggc atacgacgtt cgcggtcgag
     4381 tcccggagga tctcgacgag gacatcgcgt atcggatcgg tcgcggttat gcggccttcg
     4441 tgaagcctcg tacggtcgcg gtcgggcgag acattcgcgc ttcgagcccc gcgctgacgg
     4501 ccgcgttgac gcgagggctc acggactccg gcgtcgacgt gctcgacatc ggcgtcggcg
     4561 gcaccgagct cgcctatttc gcgacgttca gccgcaagct cgacggcggc atcatggtta
     4621 cggcgagcca caat
//
LOCUS       DATCUD010000225         1770 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9244, whole genome shotgun sequence.
ACCESSION   DATCUD010000225 DATCUD010000000
VERSION     DATCUD010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1770)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1770)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1770
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9244"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..900
                     /locus_tag="VIQ99_03205"
     CDS             <1..900
                     /locus_tag="VIQ99_03205"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9182179.1"
                     /translation="LLHRKGGPGMREGAVAGVVRLFGYDMRRCLATHASVSVHVAFSA
                     ERSQEVVLKVLHRGRGSLARDSNFERFVAEFKLLYDIDDRAVAEIYDFRVTSQYCYIA
                     MEYFPLGHLGTQLDAPLAPDEALHYAREIAHGLSIIHAAGVIHRDLKPGNIMLREDDS
                     VALIDFGISQSAQITNVLAETPGEIAGTPYYMSPEQASGTATDERTDLYALGVILHQM
                     LTGEKPYVGDTTDAILEQHKNAPVPVLREDFAIYQTLLNKLLAKDPAQRYGSAREVLE
                     ALDQIAATAAASTPPADLPAVAI"
     gene            complement(908..1657)
                     /gene="ttcA"
                     /locus_tag="VIQ99_03210"
     CDS             complement(908..1657)
                     /gene="ttcA"
                     /locus_tag="VIQ99_03210"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019507834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEY9182180.1"
                     /translation="MRGLVGKAIGDYRMIEDGDLVMVCLSGGKDSYTLLDMLQSLQRK
                     APVSFELVAVNLDQKQPGFPAHVLPEYLTELGVPHRIVTEDTYSIVTRVIEPGKTMCG
                     LCSRLRRGILYRVADELGATKIALGHHRDDIVETLFLNMFYGARLKAMPPKLKSDDGK
                     HVVIRPLAYCAERDIARYARGREFPIIPCNLCGSQENMKRREIKAMLSSWEQQDPGRT
                     DRLFRSLQNVTASHLADRDLFDFERFAGDDE"
BASE COUNT          293 a          593 c          585 g          299 t
ORIGIN      
        1 ctgctgcacc gcaagggcgg cccgggcatg cgcgaaggcg ccgtcgccgg cgtcgtgcgc
       61 ctgttcggct acgacatgcg ccgctgtctc gcgactcatg ccagcgtctc ggtgcacgtg
      121 gccttcagcg cggagcgcag ccaggaggtc gtgctgaagg tgctgcatcg cgggcgcggc
      181 tcgttggcgc gcgactcgaa tttcgagcgc ttcgtcgcgg agttcaagct gctgtacgac
      241 atcgacgatc gtgcggtcgc cgagatctac gatttccgcg tcacgagcca gtactgctac
      301 atcgcgatgg agtacttccc gctcggccat ctcggcacgc agctcgacgc gccgctggcg
      361 ccggacgagg cgctgcacta tgcgcgcgag atcgcgcacg ggctctcgat catccacgcg
      421 gccggcgtga ttcaccgcga cttgaagccc ggcaacatca tgctgcgcga agacgacagc
      481 gtggcgttga tcgacttcgg tatctcgcag tcggcgcaga tcacgaacgt tctggccgag
      541 acgcccggcg agatcgcagg cacgccgtac tacatgagcc ccgagcaggc cagcggcacc
      601 gccacggacg agcgcacgga cttgtacgcg ctcggcgtaa tccttcacca gatgctcacg
      661 ggcgagaagc cgtacgtcgg cgacacgacg gacgcgatcc tcgagcagca caagaacgcg
      721 ccggtgccgg tgctgcgcga ggacttcgcg atctaccaaa cgctcttgaa caaactgctc
      781 gcgaaggacc cggcgcaacg ctacggcagc gcgcgcgagg tgcttgaagc tctcgatcag
      841 atcgcagcaa ccgccgcggc ctcgacgccg cccgcggact tgccggcggt cgcgatctag
      901 tccgccgcta ctcgtcgtcg cccgcgaagc gctcgaagtc gaacaggtca cgatcggcca
      961 gatgcgacgc cgtgacgttc tgaaggctgc ggaatagccg gtccgtgcgc ccgggatcct
     1021 gttgctccca gctcgacagc atcgccttga tctcgcggcg cttcatgttc tcctgcgagc
     1081 cgcagaggtt gcacgggatg atcggaaact cgcggccgcg cgcgtaacgc gcgatgtcgc
     1141 gctcggcgca atacgcgagc ggccggatca cgacatgttt gccatcgtcg cttttcagct
     1201 tcggcggcat cgctttcagc cgcgcgccgt agaacatgtt cagaaacagc gtctcgacga
     1261 tgtcgtcgcg gtggtggccg agcgcgatct tcgtggcacc gagctcgtca gccacgcgat
     1321 agaggatccc gcgccgcagg cgcgagcaca ggccgcacat cgttttgccg ggctcgatca
     1381 cgcgcgtgac gatcgagtag gtatcctcgg tcacgatccg gtggggcacg ccgagctcgg
     1441 tcaggtactc gggcagcacg tgcgccggga agcccggctg tttctggtcg aggttcacgg
     1501 ccacgagctc gaagctcacg ggcgccttgc gctggaggct ctgcagcatg tcgagcagcg
     1561 tataagaatc cttgccgccc gagagacaca ccatgacgag gtccccgtcc tcgatcatcc
     1621 ggtagtcgcc gatcgctttg ccgacgagcc cgcgcagctc ggcctgaagc tttttccagc
     1681 ggccggaagc ctcgctcgcg gcggcctcgc gctcggcggc ggtggcgacg gattcggcgg
     1741 ctcggcttga ggtcacggtg atctcggcgt
//
LOCUS       DATCUD010000226         1661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9271, whole genome shotgun sequence.
ACCESSION   DATCUD010000226 DATCUD010000000
VERSION     DATCUD010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9271"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            50..370
                     /locus_tag="VIQ99_03215"
     CDS             50..370
                     /locus_tag="VIQ99_03215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182181.1"
                     /translation="MLLKLLKRWLGWDPDSGLLDFSELSLRPRPKAVKPLPPITVRPP
                     AEAPAPATAQERRAKPERKPIDVLGNPKLTLDKPGDDGFDPYNTGAFNRSTSWEKIGR
                     QRKR"
     gene            complement(383..649)
                     /locus_tag="VIQ99_03220"
     CDS             complement(383..649)
                     /locus_tag="VIQ99_03220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182182.1"
                     /translation="MGFVLGSAAAIAFSLIGSVAVFLVLKSKYPALEAELPALLTSAG
                     LFVALAVTAAISFYGQVKGRAWRYAAIVALLVVLITVAGYHGLR"
     gene            800..>1661
                     /locus_tag="VIQ99_03225"
     CDS             800..>1661
                     /locus_tag="VIQ99_03225"
                     /inference="COORDINATES: protein motif:HMM:NF037004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEY9182183.1"
                     /translation="MKEHFGRFGITLIAASTSFAVFAAVEPLPPLQIQPKHPAISTSV
                     SRLIEEMHYSLPRLDNSLSSAILDQYLDTLDGNRMYFTASDIASFNRLRYELDDRTRT
                     GDLQPVFDIFNLFRRRAGERIEYAVSLLATEPDFTLDESFQWDRSELPWPVSDEEINE
                     VWRKSVKSDALRLVLTGETWAEVAQTLKERYERSYKRITQLTTDDVFEMYMNAVAHNM
                     DPHSSYLSPRQSEEYRIQMSLSYDGIGASLQLEDDYVKVMEIIPGGPAQIDGQLKRDD
                     RITAVGEAGSE"
BASE COUNT          349 a          537 c          497 g          278 t
ORIGIN      
        1 tctgctatgg tcgtaagacg cggcgcctga cagcgttgcg gccattcaca tgctgctcaa
       61 gctgctcaaa cgttggctcg gctgggaccc tgactcgggg ctcctcgact tctcggagct
      121 ttcgttgcgt ccgcggccga aggccgtgaa gccactaccg ccgatcaccg tgcgcccacc
      181 cgcagaagcg ccggcgccgg cgaccgcgca ggaacgacgc gcgaagcccg agcgcaagcc
      241 gatagacgtc ctcggcaatc ccaagctcac gctcgacaag ccgggcgacg atggtttcga
      301 tccctacaac accggcgcgt tcaatcgcag cacgtcgtgg gaaaagatag gccggcagcg
      361 caaacgctga gcgagcttac gttcaacgca gaccgtgata gccggctacg gttatcagca
      421 ccaccagcag cgccacgatc gccgcgtatc gccaggcacg acctttgacc tgcccataga
      481 aactgatcgc tgccgtcacg gccagcgcga cgaacaggcc cgcgctcgtc agcagagccg
      541 gcagctcggc ctcgagcgcc ggatacttcg acttgagcac caggaatacg gccacgctcc
      601 cgatgagcga gaatgcgatc gccgccgcgc tgcccagcac gaagcccaag gctacgacgg
      661 ccggacgcat gcggccgccg gtggctcagg tacgtgaatc ggttcggttt ttcggcccaa
      721 tgggcttgat tcgatggggc aaggaacgga aacttaacag actaatgcga gacgtcgcta
      781 cggactccaa ggagccaacg tgaaggagca tttcggccgg tttggcatca ccttaatcgc
      841 agcatccacg agcttcgcgg tcttcgccgc tgtcgagccg ttgccgccgc tccagattca
      901 gccgaagcat ccggcgatca gcaccagcgt cagccgcttg atcgaagaga tgcactattc
      961 gttgccgcgc ctggacaatt ctctgtcctc ggcgatcctc gatcaatatt tggacacgct
     1021 cgacggcaac cgcatgtact ttaccgcgag cgatatcgcg agcttcaatc gcctgcgcta
     1081 tgagctcgac gaccgtacgc gcaccggcga tctgcaaccc gtgttcgata tcttcaactt
     1141 gttccgtagg cgcgcgggcg agcgcatcga atatgccgtg agcctgctgg cgaccgaacc
     1201 cgacttcacg ctcgacgagt cgtttcaatg ggatcgcagc gagttgccgt ggcccgtctc
     1261 ggacgaagag atcaacgaag tctggcgcaa gagcgtcaag agcgacgcgc tgcgcctggt
     1321 cctgaccgga gagacgtggg ccgaagtcgc ccagacgctg aaggagcgct acgagcgctc
     1381 gtacaaacgt attacgcagc tcacgaccga cgacgtgttc gagatgtaca tgaacgccgt
     1441 cgcccacaac atggaccctc actcgagcta cttgtcgccg cgacagagcg aggaatatcg
     1501 gattcagatg agcctgtcct acgacgggat cggcgcatcg ctgcagctcg aagacgacta
     1561 cgtcaaggtc atggagatca tccccggcgg gccggctcag atcgatggtc agctcaagcg
     1621 cgacgatcga atcacggcgg tcggcgaagc cggcagcgag c
//
LOCUS       DATCUD010000227         1787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9275, whole genome shotgun sequence.
ACCESSION   DATCUD010000227 DATCUD010000000
VERSION     DATCUD010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9275"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..573
                     /locus_tag="VIQ99_03230"
     CDS             <1..573
                     /locus_tag="VIQ99_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182184.1"
                     /translation="YQNRRVVVIDADTGKFKRYWGAYGNKPDDTDLGLYDPAAPPAQQ
                     FRNPVHCAEPSLDGFVYVCDRVNNRIQVFRKDGTFVSELRVAPETRGAGSVWDIALSK
                     DPGQAYIYLADGLNERVYIIHRESMQILTSFGDGGRQPGQFFGVHSIAVDSQGNIYTT
                     ETYEGKRIQKFVFQGLAPIPSESQGALWPE"
     gene            603..1574
                     /locus_tag="VIQ99_03235"
     CDS             603..1574
                     /locus_tag="VIQ99_03235"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9182185.1"
                     /translation="MRITLVLCAFALPFVVAAQTRESGPWWPNAEWGPMDQAGASNRI
                     TPEKIVAALMLAKTGRVYEIGQVYERGMPLGGTRDYALRLVPAIEPAGTNRVLYNDEF
                     LAAEVGQVGTQFDGLGHIGGEIRYADGSLHRVFYNGYTTAEMNAGTGLRQLGVEHVKP
                     LITRGVLVDLPAYKNVQRLAGGYEVTLADVRGALARQGIAENSIAPGDAVLFRYGWAQ
                     LWSTPAEYGAPSLPGIGMEVARWLVERKVTVTGSDTSVTEVTPSPMQGAAIPVHQELM
                     MKNGIFNIENLTFEELAAERGYEFLFIATPIRFEGATGSPLRPLAIR"
     gene            1591..>1787
                     /locus_tag="VIQ99_03240"
     CDS             1591..>1787
                     /locus_tag="VIQ99_03240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182186.1"
                     /translation="MNGSLVDSIQKEIAQEKAQGLARTETRLLAALEAYRQPRGAADD
                     RVMWELVDAATSFVVQREACGL"
BASE COUNT          321 a          587 c          599 g          280 t
ORIGIN      
        1 taccagaaca ggcgcgtcgt cgtcatagac gctgataccg ggaagttcaa gcgctactgg
       61 ggcgcctacg ggaacaagcc cgacgacacg gacctagggt tgtacgaccc cgccgcgcct
      121 ccagcgcagc agtttcggaa ccccgtgcat tgcgcggagc cctcgctcga cggcttcgtt
      181 tacgtctgcg atcgcgtcaa caaccgcatt caggtgttcc gcaaggacgg cacgttcgtc
      241 agcgagctgc gcgtggcgcc cgagacgcgt ggcgcgggct cggtgtggga catcgcgcta
      301 tcgaaggacc ccgggcaggc ctatatctat ctcgcggacg gattgaatga gcgcgtctac
      361 atcatccatc gcgagtctat gcagatcctg acgagcttcg gcgacggcgg ccgtcagccg
      421 ggccagttct tcggcgtgca cagcatcgcc gtggattcgc aaggcaacat ctacacgacc
      481 gagacttacg aaggtaagcg catccagaag ttcgtgttcc aggggctcgc gccgatccca
      541 agcgaatcgc agggcgcact ctggccagag tagcgccctc ccaacttgcc cggggtttcg
      601 tcatgagaat cacgctcgtg ttgtgcgcat tcgcgctgcc gttcgtcgtc gccgcccaga
      661 ctcgcgagtc gggcccgtgg tggccgaacg ccgagtgggg cccgatggat caagccggcg
      721 cctcgaaccg aatcacgccg gagaagatcg tcgcggcgct gatgctcgcg aagaccgggc
      781 gcgtgtacga gatcggccaa gtctatgagc gcggcatgcc gctcggcggc acccgcgact
      841 acgcattgcg gttggtgccc gcgatcgagc ccgcgggcac gaaccgcgtg ctctacaacg
      901 acgagttcct tgcggccgag gtcggccagg tcggcacgca gttcgacggc ctcggccaca
      961 tcggcggcga gatccggtac gccgacggct cgctgcaccg cgtgttctac aacggttaca
     1021 cgaccgcgga gatgaacgcc ggcacgggac tgcgccagct cggcgtcgag cacgtgaagc
     1081 cgttgatcac gcgcggcgtg ctcgtcgact tgccggcgta caagaacgtg caacggctcg
     1141 cgggaggcta cgaagtcacg ctcgcggacg tgcgcggcgc gctggcgcgc cagggcatcg
     1201 ccgagaattc catcgcgcct ggcgacgctg tgctgttccg ctacggctgg gcgcagctct
     1261 ggagcacgcc cgccgagtac ggagcgccgt cgctacccgg catcggcatg gaagtcgcgc
     1321 gctggctcgt cgagcgcaaa gtcacggtca cgggcagcga cacgtcggtc acggaagtga
     1381 cgccgagccc gatgcagggc gccgcgattc ccgtacacca agagctgatg atgaagaacg
     1441 gcatcttcaa catcgagaac ctgacgttcg aggagctcgc cgcggaacgc ggctacgagt
     1501 tcctgttcat cgccacaccg atccgattcg agggcgcgac gggctcgccg ctgcggccgc
     1561 tcgcgatccg ctgagcacga gaccggttcg atgaacggct ccctcgtcga ttccatccag
     1621 aaagagatcg cgcaggaaaa agcgcaagga ctcgcgcgca cggagacgcg gctgctcgcc
     1681 gcgctcgaag cctatcggca gccgcgcggc gcggccgacg accgtgtgat gtgggagctc
     1741 gtcgacgcgg cgacgtcgtt cgtcgtgcaa cgcgaagcgt gcgggct
//
LOCUS       DATCUD010000228         2481 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37755, whole genome shotgun sequence.
ACCESSION   DATCUD010000228 DATCUD010000000
VERSION     DATCUD010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37755"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            263..667
                     /locus_tag="VIQ99_03245"
     CDS             263..667
                     /locus_tag="VIQ99_03245"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9182187.1"
                     /translation="MRLQLNFKSGKPVYLQIVDQVRAAVAAGSIRAGEPLPSIRPLAE
                     ELRVNRNTVAKAYTELESQGVIETAAGKGCFVRNTGTPLKKKACLTLLAEEVDQAVVQ
                     AHHLQVTRAEFLKLVEERLDSFEEQRHSKVAT"
     gene            664..1581
                     /locus_tag="VIQ99_03250"
     CDS             664..1581
                     /locus_tag="VIQ99_03250"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182188.1"
                     /translation="MTDHAVIHIDRLVRRYGHTDAVNGLTLEVKPGRCYGFFGRNGAG
                     KTTTIKCLLNLLRPTSGTVRVFGLDPRKAEVAVKSRIAYVPDYVAFYPWMTVRQTLDY
                     FAAFRARWNRATESALLERFRLDPGQNTTHLSKGQRTQLALITAICAEPELLVLDEPT
                     AGLDPIVRREFIEAVIGAYQEGDPGRRTVFVSTHLIAEFEGLIDEFTIIEDGRAVLSA
                     DADRARDRYQKVYARFAAPLCGTLDLGAARVLKQNGREIEVLAEGDAERVVERLKTRS
                     PEVINTESLTLEEIFVAALQPARASAALA"
     gene            1578..>2481
                     /locus_tag="VIQ99_03255"
     CDS             1578..>2481
                     /locus_tag="VIQ99_03255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182189.1"
                     /translation="MTTVLRSALVLKEVRGLGPTWLTAAALLVAVGFVETGLDSAGAR
                     QLTVLFYVGACVLLGALSIGQEFTDRTLAGLLAQPAARASVLLRKLGVVGAMLLALGG
                     LAWAYGLTPLAVARAWPEISPSGRVLATVLPVLGGVLLTPCLTLLTRSALAGSVFTIA
                     LSMVMMIGSQAAVPWLYGDAATLAQANAWFLDIFVHTMLVVVVLSALLMWRLFMRLEA
                     IEGRGLDLHLRAWLFKPRVHLAAARSARSVWQRMLGKELHLLEITFVVSGLYVAAWLV
                     VVLVGESLFPTRRAGLMTAATLLHA"
BASE COUNT          383 a          840 c          823 g          435 t
ORIGIN      
        1 catcgtcgtg ttgagcttct tcgatcacag cttgaagggg gagcccgccc cgggagagtt
       61 gtttgccgac atcccggaaa tcgtcgtccg gcaccattca atcgatgcac gcagggccgc
      121 aacgccctag ggacgagttg actccgtccc caatcccttc gccccggaga aagtgttacc
      181 catgtcgccg ccgccacggt tcggccgctc gggagttgac acgcgctcgg cgtctgtcct
      241 actgtcatag gacagacaat ccatgcgcct acagctcaac ttcaaatccg gcaagcccgt
      301 gtacctgcag atcgtcgacc aggtccgcgc ggccgtcgcc gcgggctcga tccgcgcggg
      361 cgagccgctg ccgtcgatcc ggccgctcgc cgaggagctg cgcgtgaatc gcaacacggt
      421 cgccaaggct tacacggagc tcgaaagcca gggcgtcatc gagaccgcgg ccggcaaggg
      481 ctgcttcgtg cgcaataccg gcacgccgct caagaagaag gcgtgcctga ctctgctcgc
      541 cgaggaagtc gaccaagccg tcgtgcaggc acatcaccta caggtgacgc gcgcggaatt
      601 cctcaagctg gtcgaggaac gcctggattc tttcgaggaa caacgccaca gcaaggtagc
      661 gacatgacgg accacgcggt catccacatc gatcggttgg tgcggcgcta cgggcatacc
      721 gacgccgtga acggactcac gctcgaggtc aaacccggcc gctgctacgg cttcttcggc
      781 cgcaacggcg ccggcaagac gacgacgatc aagtgtctct tgaacctgct gcgcccaacg
      841 agcggcacgg tgcgcgtctt cgggctcgat ccgcgcaagg cagaagtggc cgtcaagtcg
      901 cgcatcgcct acgtgcccga ctacgtcgcg ttctatccgt ggatgaccgt gcgccagacg
      961 ctcgactact tcgcggcctt ccgcgcgcgc tggaaccgcg cgaccgagag cgccctgctc
     1021 gagcggttca ggctcgatcc gggccagaac acgacgcacc tgtcgaaggg ccagcgaacg
     1081 cagctcgcgc tgatcaccgc gatctgcgcc gagcccgagc tgctcgtgct cgacgagccg
     1141 accgccggcc tcgatccgat cgtgcgtcgc gagttcatcg aggccgtcat cggcgcctac
     1201 caggaaggcg atccgggccg gcggaccgtg ttcgtctcga cgcatttgat cgccgagttc
     1261 gagggactca tcgacgaatt cacgatcatc gaggacgggc gcgccgtctt gtcggccgac
     1321 gcggatcgcg cccgcgaccg ctatcagaag gtctacgcgc ggttcgctgc gccgctgtgc
     1381 ggcacgctcg atctcggcgc cgcgcgggtg ctgaagcaga acggccgcga gatcgaggtg
     1441 ctcgccgagg gcgacgcgga gcgcgtcgtc gagcgtttga agacccgatc gcccgaggtg
     1501 atcaacaccg agtcgttgac gctcgaggaa atcttcgtcg cagcgctgca gcccgcccgc
     1561 gcgagcgcag cactcgcatg acgaccgtgc ttaggtccgc gctcgtctta aaggaagtcc
     1621 gcggcctcgg gccgacgtgg ctgaccgcgg cagcgctgct cgtcgccgtc ggcttcgtcg
     1681 aaaccggcct cgatagcgcc ggcgcgagac agctgaccgt gctcttctac gttggcgcct
     1741 gtgtcttgct cggcgcgctg tcgatcgggc aagagttcac cgaccgcaca ctggccgggt
     1801 tgctcgcgca gccggcggcc cgcgccagcg tgctgctgcg taaactcggc gtggtcggcg
     1861 cgatgctgct cgcgttgggc ggcctggcgt gggcctacgg cctgacgccc ctcgcggtcg
     1921 cacgcgcgtg gcccgagatc tcaccgtctg ggcgcgtgct cgcgaccgtg ctgccggtct
     1981 tgggcggtgt gctgctcacc ccgtgcctga cgctgctcac gcgcagtgcg ctggcgggct
     2041 ccgtgtttac catcgctctt tcgatggtga tgatgatcgg cagccaagcc gctgtgccgt
     2101 ggctgtacgg ggacgcggcg acgcttgcac aggcgaacgc ctggttcctc gatatcttcg
     2161 tgcacacgat gctggtcgtc gtggtgctca gcgcgctcct gatgtggcgg ctgttcatgc
     2221 gcctcgaagc gatcgagggt cgcgggctcg acctacacct gcgggcgtgg ttgttcaagc
     2281 cgcgcgtgca cttggccgcg gcgcgctccg cacgctcggt gtggcagcgg atgctcggca
     2341 aggagctgca cctccttgag atcacgttcg tcgtgtccgg actgtacgtg gcggcatggc
     2401 tcgtggtcgt gctggtcggc gagtctttgt ttccgacccg gcgtgccggg ctcatgaccg
     2461 ccgcgacctt gctgcacgcc g
//
LOCUS       DATCUD010000229         1798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_30745, whole genome shotgun sequence.
ACCESSION   DATCUD010000229 DATCUD010000000
VERSION     DATCUD010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30745"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1798
                     /locus_tag="VIQ99_03260"
     CDS             <1..>1798
                     /locus_tag="VIQ99_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012051826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY9182190.1"
                     /translation="FQRAREERHEFITVEHLLLALLDTPSVIETLKACGADLARLRRE
                     LKEFIESATPRLRGEDDESREVQPTLGFQRVLQRAVFHVQSSGRKEVTPVNVLVAIFS
                     EKQSQAVFLLGTQDVTRLDVVNFISHGVPKVQEASKGGEADESAVDAERAAEANPLER
                     FTTNLNALAEAGKIDPLIGRQLEIERTVQILCRRRKNNPLFVGEAGVGKTALAEGLAR
                     LIVEGKVPDILRSCTIYALDMGSLIAGTKYRGDFEKRLKGVVAGLKKKPGAILFIDEI
                     HTVIGAGAASGGVMDASNLIKPLLANGELRCIGSTTYSEFRGIFEKDHALARRFQKID
                     VTEPSVAETIEILRGLKSRFEEHHNISYTDEALTAAAELSAKHINDRHLPDKAIDVID
                     EAGANCRLQPESTRPRVVDVALIQNIVAKIARIPPKNVSASDRDVLRNIERDLKLVIF
                     GQDRAIGALASAIKMARSGLGDERRPVGSFLFAGPTGVGKTEVTRQLALTLGVELIRF
                     DMSEYMERHTVSRLIGAPPGYVGFDQGGLLTEAITKHPHCVLLFDEIEKAHPEVFNLL
                     LQVMDHGTLTDNNGRKADFRNVTIVMTTNAGAQ"
BASE COUNT          357 a          560 c          583 g          298 t
ORIGIN      
        1 gtttcaacga gcacgagaag agcggcacga attcatcacc gtcgagcacc tgttgctcgc
       61 attgctcgac acaccgagcg tgatcgagac cttgaaggcc tgcggagccg acctcgctcg
      121 cctacggcgc gagctgaagg agttcatcga gagcgccacg ccacggctgc gcggtgagga
      181 cgacgagagc agggaggtcc aaccgacgct gggcttccaa cgcgtgctgc aacgcgccgt
      241 attccacgtg cagtcgagcg gccgcaagga agttacgccc gtcaacgtcc tcgtcgcgat
      301 cttcagcgag aaacaatcgc aggcggtctt tctgttgggc acgcaggacg tcacgcgtct
      361 cgacgtggtc aatttcatct cgcacggcgt gccgaaggtt caagaggcga gcaagggcgg
      421 cgaggcggac gagtccgccg tggacgccga acgcgctgcc gaggccaatc cgctcgagcg
      481 tttcacgacg aacttaaacg cgctggccga agcgggcaag atcgacccgt tgatcgggcg
      541 gcagctcgag atcgagcgga ccgtgcaaat cctctgccgt cgtcgcaaga acaatccgct
      601 gttcgtcggc gaagcaggcg tcggtaagac cgcgctcgcc gaagggctcg ctcgcttgat
      661 cgtcgagggc aaggtcccgg acatcctgcg cagctgcacg atctacgcgc tcgacatggg
      721 ctctctgatc gcgggcacga agtaccgcgg cgacttcgag aagcgtttga aaggcgtcgt
      781 cgcggggctc aagaagaaac ccggcgcgat cctgttcatc gacgagatcc ataccgtgat
      841 cggcgcgggc gcggcctcgg gtggcgtcat ggacgcctcg aacctgatca aaccgttgct
      901 cgcgaacggc gagctgcgct gcatcggctc gacgacgtat agcgagttcc gcggcatttt
      961 cgagaaggat catgcgctcg cgcggcgatt ccagaagatc gacgtcacgg agccgtcggt
     1021 cgccgagacc atcgagatct tgcgtgggct gaagagccgc ttcgaggagc atcacaatat
     1081 ctcgtatacg gacgaggctt tgaccgctgc ggcagagctc tcggccaagc acatcaacga
     1141 tcgccatcta ccggacaagg ccatcgacgt catcgacgag gcgggcgcca actgccggtt
     1201 gcagccggag agcacgcggc cgcgcgtcgt cgacgtcgcg ttgatccaga acatcgtcgc
     1261 gaagatcgcg cgaatcccac cgaagaacgt ctccgcgtcg gatagagacg tgctccgcaa
     1321 catcgagcgc gacctgaagc tcgtgatctt cggccaggat cgcgcgatcg gcgcgctggc
     1381 ctccgcgatc aagatggcgc gctcgggatt gggcgacgag cgccgccccg tcggctcgtt
     1441 cttgttcgcg gggccgaccg gtgtcggtaa gacggaagtc acgcggcaac tcgcgctgac
     1501 gctcggcgtc gagctgattc gcttcgacat gtcggagtac atggagcggc acaccgtatc
     1561 gcgcttgatc ggcgcgccgc ccggctatgt cggtttcgat cagggcggct tgttgaccga
     1621 ggccatcacg aagcatccgc actgcgtgct gttattcgac gagatcgaga aggcccaccc
     1681 ggaggtcttc aacctgctgc tgcaggtcat ggaccacggc acgttgaccg acaacaacgg
     1741 caggaaggcc gacttccgca acgtcacgat cgtgatgacc acgaatgcgg gtgcccaa
//
LOCUS       DATCUD010000230         1784 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66343, whole genome shotgun sequence.
ACCESSION   DATCUD010000230 DATCUD010000000
VERSION     DATCUD010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1784
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66343"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VIQ99_03265"
     CDS             complement(<1..416)
                     /locus_tag="VIQ99_03265"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9182191.1"
                     /translation="MSPVHLERPSARRERDFIEAALRSRALHRGLVTAAATVADYRDY
                     LDRTRRDDRASFFVVAEDSAALVGVVEINDIVRASQGFGMLAYYAFTPYAGSGLMRAG
                     VTLAIEAAFGDLGLDRLDANVQPTNLRSVALLERLG"
     gene            complement(433..1365)
                     /gene="secF"
                     /locus_tag="VIQ99_03270"
     CDS             complement(433..1365)
                     /gene="secF"
                     /locus_tag="VIQ99_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEY9182192.1"
                     /translation="MQLLTGTPNFNFVKYRRVAMILSSLMSLVALVTIVYPGLNYGLD
                     FTGGIIVEAQYTATPQLDSIREGLTEAGFESAQVQNFGSSSDVLIRLPPTDEAESVTA
                     VQDRVLAVLRAQGEDVTILRLESVGSQVGEDLAEQGALAMIFALFMVFIYVMLRFRWK
                     LAVGAIVATVHDVLVTTGVFAVLGWQFDLTVLGSILAVLGYSINDTIVVYDRIRDNFR
                     LMRRGSAEAIVNASVNQTLARTLVTGVTSLLVLFALMFIGGDTLWGFSVALIIGIVVG
                     TYSSIYIASSMALALNVSPADFTVTKQEKVDELP"
     gene            complement(1424..1630)
                     /gene="tatA"
                     /locus_tag="VIQ99_03275"
     CDS             complement(1424..1630)
                     /gene="tatA"
                     /locus_tag="VIQ99_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011920744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEY9182193.1"
                     /translation="MGFAMSVPQLLIILVIVALIFGTKRLKEVGGDLGSAVKSFRKAM
                     NVTGDEPESTEPPKQLTRDEQEKK"
BASE COUNT          358 a          584 c          544 g          298 t
ORIGIN      
        1 aagccgagcc gttccaatag cgccacggag cggaggttcg tgggctgaac gttcgcgtcg
       61 agacgatcga gacccaagtc gccaaatgcg gcttcgatcg cgagcgtcac ccccgcgcgc
      121 atcaagccgc ttccggcgta aggcgtgaac gcgtagtacg cgagcatgcc gaaaccctgc
      181 gacgcacgca cgatgtcgtt gatctcgacg acgccgacga gtgcagccga gtcctccgcg
      241 acgacgaaga acgaggcgcg gtcgtcgcgc cgcgttcgat cgagatagtc gcggtagtcg
      301 gccacggtcg ccgcggcggt tacaagcccg cgatgcaacg cgcggctccg aagcgcggcc
      361 tcgatgaaat cgcgctcgcg gcgcgcgctc gggcgttcga ggtggaccgg cgacacgcga
      421 ccgtccgtga cgctagggca gctcgtcgac cttttcctgc ttcgtgacgg tgaagtccgc
      481 cggcgagacg ttgagcgcga gcgccatcga gctcgcgatg tagatcgaag agtacgtccc
      541 gaccacgatg ccgatgatca gcgccaccga gaagccccac agcgtgtcgc cgccgatgaa
      601 catcagcgcg aacagcacca acaagctcgt gacgccggtg accaacgtgc gtgccaacgt
      661 ttggttgacc gatgcgttca cgatcgcttc cgcagacccg cgccgcatca ggcgaaagtt
      721 gtcgcggatc cggtcgtaga cgacgatcgt gtcgttgatc gagtagccga gcaccgccag
      781 gatcgatccc agcaccgtga ggtcgaactg ccagccgagc accgcgaaca ctccggtagt
      841 tacgagcacg tcgtgaaccg tggcgacgat cgcgccgacg gcgagcttcc agcggaatcg
      901 cagcatcacg tagatgaaga ccataaacag cgcgaatatc atcgcgagcg cgccttgctc
      961 ggctaggtcc tcgccgacct gcgagccgac cgactcgagg cgcaagatcg tgacgtcctc
     1021 gccctgcgca cgcaacacgg cgagcacacg atcctgcacc gcggtcacgc tctcggcctc
     1081 gtccgtcgga ggcaagcgaa tcaacacgtc ggagctcgag ccgaaattct ggacttgggc
     1141 ggattcgaaa ccggcctccg tgagcccttc tcgaatcgaa tccagctgcg gcgttgccgt
     1201 gtactgcgcc tcgacgatga tgccgcccgt gaaatccagg ccgtagttca aacccggata
     1261 aacgatcgtg acgagcgcga ccaacgacat cagggacgac aggatcatcg ccacccgacg
     1321 gtacttcacg aaattgaagt tgggagtgcc tgtcagaagc tgcatagatt cacggccgcg
     1381 aaagcccggc gcgggctcgc gcgggtttgc tcacgggccg agtttacttc ttttcttgtt
     1441 cgtcgcgagt cagttgcttc ggaggctcgg tgctctccgg ctcgtctccg gtgacgttca
     1501 tggccttgcg aaagctcttc acggcgctgc cgaggtcgcc gccgacttcc ttcaaacgtt
     1561 tcgtgccgaa gatcaacgcc acgatcacca agatgatcag cagctgagga acgctcatcg
     1621 caaagcccat acaccgtctc cattcgacgc cgccgcgagc gggtcgagaa ccgttatttt
     1681 gctcgtcgcc accgggaaaa gccaaccgag gccgaaatcc cttgcggcgg cgcacatctc
     1741 aggatcttgc ggcctattga ccgcggcccc ggcgcactag ttca
//
LOCUS       DATCUD010000231         2053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16579, whole genome shotgun sequence.
ACCESSION   DATCUD010000231 DATCUD010000000
VERSION     DATCUD010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16579"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VIQ99_03280"
     CDS             <1..195
                     /locus_tag="VIQ99_03280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182194.1"
                     /translation="REPGYSLWNARFGVNGEAWAAQLFVNNASDETYRVLARNDGAFG
                     IHELYGMPRTAGVSFQFQWE"
     gene            complement(239..1846)
                     /locus_tag="VIQ99_03285"
     CDS             complement(239..1846)
                     /locus_tag="VIQ99_03285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020721593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEY9182195.1"
                     /translation="MWEHNYDPLGNPVLSTLVAALPIVVLLIMIGVLRKPAWMSALGG
                     LGMALVVAIVAYGMPADLAVRSSLMGAAFGLLPIGWIVYWAVVLYRVTLETGNFEVIK
                     DSIGGITKDRRLQAMLIAFAFGAFVEGAAGFGTPVAVAAAMLTGLGFSPFFAAGICLL
                     ANTAPVAFGSIGIPVTTLASTTGIDELTLSQWVGRICAPVSVFIPAYLIMVMGGLKGL
                     KGVMPAAIVCGICFASMQLTVSNFIGPQLVDIIAALTAIIGLVALLKVWQPKDNFVLA
                     GEHAAVSEPKKHGFGRTMLAWSPYLLLVAFVLVWGYGPSKRALETTNIVFAWPGLHNE
                     ITRMAPMVATPTPYAANYTFNWLAAAGSACALATMAAALVLRVSVGMYVGILGRVLKQ
                     LAFSLLTIACVLGLAYLMNYSGAVVTLGLAFAATGALFPFFSALVGWLGVFLTGSDTS
                     ANALFGNLQVVTANSLGFDPAIMAASNSSGGVMGKMISLQSLAVAVAATGMARTEEGK
                     LFRFTVKHSVFLAAVLGVIATIYAYAN"
     gene            complement(1862..>2053)
                     /locus_tag="VIQ99_03290"
     CDS             complement(1862..>2053)
                     /locus_tag="VIQ99_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017501061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182196.1"
                     /translation="AAGSEFFVRYREDQEGATSVTGSLVAPFDGEHGWYWVNINDVPI
                     TITLTVTGFFDDIVDYGIF"
BASE COUNT          396 a          664 c          674 g          319 t
ORIGIN      
        1 cgggagccgg gctactcgct gtggaacgcg cgcttcggtg tgaacggcga ggcgtgggct
       61 gcgcagctct tcgtgaacaa tgccagcgac gagacctatc gcgtgctcgc gcgcaacgac
      121 ggcgcgttcg gcattcatga gctctatggc atgccgcgaa ccgcaggcgt gagcttccag
      181 tttcagtggg agtgaccgcg gcgccgggac gttggtagga tgcgtcgccg cgtgccggct
      241 agttcgcgta cgcgtagatg gtagcgatca cgccgagcac ggccgcgaga aatacgctgt
      301 gcttgaccgt gaaacggaat agcttgcctt cctccgtgcg cgccatgccg gtcgccgcga
      361 cggcgacggc caggctctgc aggctgatca tcttgcccat gacgccgccg gaggagttcg
      421 atgccgccat gattgcggga tcgaagccca agctgttcgc ggtcacgacc tgtagattgc
      481 cgaacagcgc gttcgccgac gtgtcgctgc ccgtcaagaa cacgccgagc cagccgacga
      541 gggcgctgaa gaacgggaac agcgcgcccg ttgccgcgaa cgcgagtccg agcgtcacga
      601 ccgcgccgct gtagttcatc aggtaggcga ggccaagcac gcatgcgatc gtcagcaacg
      661 agaatgcgag ctgcttcagc actcgcccca agatgccgac gtacatcccg accgaaacac
      721 gcagcacgag cgcggccgcc atggtcgcca atgcgcacgc cgagccggct gcggcgagcc
      781 aattgaacgt gtaattcgcg gcgtagggcg tcggcgtcgc gaccatcggc gccatgcgcg
      841 tgatctcgtt gtggagcccc ggccacgcga acacgatgtt ggtggtctcg agcgcgcgtt
      901 tcgacggccc gtagccccac acgagcacga atgcgacgag cagcaggtat ggcgaccacg
      961 cgagcatcgt gcgcccgaac ccgtgcttct tcggctcact gaccgctgcg tgctcgcccg
     1021 cgagcacgaa gttgtccttg ggctgccata ccttcagcag tgccacgagg ccgatgatgg
     1081 ccgtcagcgc cgcgatgatg tcgacgagct gcggtccgat gaagttcgag actgtgagct
     1141 gcatgctcgc gaaacaaatt ccgcagacga tcgccgcggg cattactccc ttcaaacctt
     1201 tcagtccgcc catgaccatg atcaggtaag cggggatgaa caccgaaacc ggggcgcaga
     1261 tgcgaccgac ccactgcgac aacgtgagct cgtcgatgcc tgtcgtgctc gcgagcgtcg
     1321 tgacgggaat gccgatcgag ccgaacgcga ccggcgccgt gttcgcgagc aggcagatgc
     1381 cggccgcgaa gaacggcgag aacccgagtc ccgtgagcat cgcggccgcg accgcgaccg
     1441 gcgtgccgaa gccggcggca ccctcgacga atgcgccgaa cgcgaacgcg atcaacatcg
     1501 cctgcagacg gcggtctttc gtgataccgc cgatcgagtc cttgatgacc tcgaagttgc
     1561 cggtctcgag cgtgacccgg tacagcacga cggcccagta gacgatccag ccgatcggca
     1621 acaagccgaa cgcggcgccc atcagcgacg agcgcacggc gagatcggcc ggcatgccgt
     1681 acgcgacgat cgcgaccacg agcgccatgc ccaagccgcc gagcgcggac atccacgccg
     1741 gcttacgcag cacgccgatc atgatcagca gcacgacgat gggcagggcg gccacgagcg
     1801 tcgacagcac gggattaccg agagggtcgt agttgtgttc ccacatggcg ggttgttctc
     1861 gttagaagat tccgtagtcg acgatgtcgt cgaagaagcc cgtgaccgtc agcgtgatcg
     1921 tgatcggcac gtcgttgatg ttgacccagt accaaccgtg ctcgccgtcg aacggtgcga
     1981 cgagcgagcc ggtgaccgag gtcgcgcctt cttgatcctc gcggtaacgc acgaagaact
     2041 cgctgccggc ggc
//
LOCUS       DATCUD010000232         2278 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59033, whole genome shotgun sequence.
ACCESSION   DATCUD010000232 DATCUD010000000
VERSION     DATCUD010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59033"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="VIQ99_03295"
     CDS             <1..264
                     /locus_tag="VIQ99_03295"
                     /inference="COORDINATES: protein motif:HMM:NF025214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9182197.1"
                     /translation="VITLQGSEPRSRLSLGVLRQAGFSEFIAGSPEAYVALARNLATD
                     VDRLQTIRARLRETLQQSPLLDAIALTRAVESAYREMWLRYCS"
     gene            complement(348..773)
                     /locus_tag="VIQ99_03300"
     CDS             complement(348..773)
                     /locus_tag="VIQ99_03300"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182198.1"
                     /translation="MPTNIKTFMVAACASALALGAAVATAHHSAAQFDFAQRVTIEGV
                     VKEFNVTNPHTWAVVEITDDKRGTRDAEYEGHSASHFFRAGYERGMVNVGDKIAILIA
                     PRRDGEDGGFIQAFTVNGKTIGFGGLSPETGRRTEGASD"
     gene            complement(784..1581)
                     /locus_tag="VIQ99_03305"
     CDS             complement(784..1581)
                     /locus_tag="VIQ99_03305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182199.1"
                     /translation="MSNQSRAHRALIATAAACAAISFAEAQQPDFTGLWETYRAPQGQ
                     GQGRASGFAGPRASLPLTEEGRRRVEEYGVLAGPMRLNGATHCADYGVPAMMSLPGSY
                     PIEFIQKPNQLTIIFEVNNETRRIYIGDRQLPPQRRLPSRAGYSAGHWEGDVLVVKTT
                     DLTDGQDQPANPYSEQATIDERFWLEDVNGTRVLTYQATITDPVYYTEPVKIERRYQP
                     YDGFIIPFGCQDELWYELLELRRGQLEAGKPVDARMSDVYKIREERE"
     gene            complement(1697..2071)
                     /locus_tag="VIQ99_03310"
     CDS             complement(1697..2071)
                     /locus_tag="VIQ99_03310"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HEY9182200.1"
                     /translation="MAEIGELRRHCRRPPQTVDILEAATEIIVPFVVVGELRAGVLLG
                     RRQVENERGLSRLLLKDGVEVVYPDDQTTHHYASVYRQLRKQGTPIPTNDVWLAALVL
                     QHNLALHARDKHFDHLPQLVRV"
BASE COUNT          385 a          738 c          730 g          425 t
ORIGIN      
        1 gtgatcacgc tgcagggttc cgaaccccgt tcgcgtttga gcctcggtgt tctgcgacag
       61 gcgggcttca gcgagttcat cgccggatcg ccggaagcgt atgttgccct ggccagaaac
      121 ctggcgaccg atgtcgacag attgcagacg atccgcgcgc ggctgcggga gactctgcaa
      181 caatcgccgc tgctcgatgc catcgccttg acgcgcgctg tcgagtcggc ttaccgagag
      241 atgtggctgc gctactgttc atagcatcga tgcgcagcac gaggttcgtg atgtgatggc
      301 ggccacggtg catgttcgcg accgccgctt tgagcccgcg cgcgtgatca gtcggaagcg
      361 ccctcggtac gccgccccgt ctcgggcgac aagccgccga agccgatcgt ttttccgttc
      421 acggtgaagg cttggatgaa gccgccgtcc tcgccatccc tgcgcggcgc gatcaagatc
      481 gcgatcttgt cgccgacgtt caccatgccg cgttcgtaac ccgcacggaa gaagtggctt
      541 gcgctgtggc cctcgtattc cgcgtcacgc gtaccgcgct tgtcgtccgt gatctcgacc
      601 acggcccacg tgtgcggatt cgtcacgttg aactctttga cgacgccttc gatcgtgacg
      661 cgctgcgcga agtcgaactg tgcggccgag tgatgtgccg tcgcgacggc cgcgccaagc
      721 gcgagcgcgg aagcgcacgc tgcaaccatg aatgtcttga tgttcgtagg catggggact
      781 ctcctattcc cgctcctcgc ggatcttgta cacgtcgctc atacgcgcgt cgacgggctt
      841 gcccgcctcg agctgtccgc gccgcagctc gagcagctcg taccacagct cgtcctggca
      901 gccgaacgga atgatgaaac cgtcgtatgg ctggtacctg cgctcgatct tgaccggttc
      961 cgtgtagtag acgggatccg tgatcgtcgc ctgataggtc aggaccctcg taccgttcac
     1021 gtcttcgagc cagaagcgct cgtcgatcgt ggcctgctcg gagtacgggt tcgcgggctg
     1081 atcctggccg tcggtgagat cggtggtctt gacgacgagc acgtcgcctt cccagtgccc
     1141 cgcggaataa cccgcgcggc tggggagccg ccgctggggc ggaagctgcc ggtcaccgat
     1201 atagatgcgc cgcgtctcgt tgttgacctc gaaaatgatc gtgagctgat tcggcttttg
     1261 gatgaactcg atcgggtaag agcccggcag gctcatcatg gccggaactc cgtagtcggc
     1321 gcagtgcgtg gcgccgttca ggcgcatggg cccggcgagc acgccatact cctcgacgcg
     1381 gcgccgcccc tcttcggtca gaggaagact cgcacgcggg ccggcgaacc cggaggcgcg
     1441 cccctggccc tgcccctgcg gcgcgcggta cgtctcccag agacccgtga aatcgggctg
     1501 ctgcgcctcg gcaaacgaga tggcggcgca ggctgcggcc gttgcgatca gcgcgcgatg
     1561 ggcgcgcgat tggttcgaca ttgcagaatt cctcgaggtt tcgaagcgca atgtagcgct
     1621 tctcgagcgc caacggagac cgcttggcgg ttcttaatgt tccggcgctg aaatgggaat
     1681 cagccgcgac gccggctcaa actcgaacga gctgcggcaa atgatcgaag tgcttgtctc
     1741 gggcgtgcaa cgccaggttg tgctgcagca cgagcgcggc caaccacacg tcgttcgtgg
     1801 gaatgggcgt gccctgcttg cggagctgcc gatacaccga cgcgtagtgg tgcgtcgttt
     1861 gatcgtcggg atagacgact tcgacgccgt ccttgagcag aaggcggctc agtccccgct
     1921 cgttctcgac ttgccggcgg ccgagcagga cccccgcccg caattcgccg acgacaacga
     1981 acggcacgat gatctccgtc gccgcctcca gaatatcgac ggtctgcggc ggccgacgac
     2041 aatgtcgccg aagctcacct atctcggcca ctacgacgac gaattcatcc gcgagaacgg
     2101 ccgctggcga ttcctgcgcc gacaatcctt ctcggacatc tcaccgttgc gctgctgacc
     2161 ggctacagcg ccggggcgcc gcagtcagcg gtaaccggac agctcaccca ccgcgtacgc
     2221 gaagctcgcg aacgccgcgg agttcacgag caacggatag agcagctgcg gcacgaaa
//
LOCUS       DATCUD010000233         2243 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16623, whole genome shotgun sequence.
ACCESSION   DATCUD010000233 DATCUD010000000
VERSION     DATCUD010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2243
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16623"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..1447
                     /gene="pstC"
                     /locus_tag="VIQ99_03315"
     CDS             68..1447
                     /gene="pstC"
                     /locus_tag="VIQ99_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006475312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEY9182201.1"
                     /translation="MASTTLLISVVGLALFAYYFGRQRAVVLAIAAGPRAFHSLPGYH
                     GGYVALWCALPAVALLVLWQIFEPVWLRSAVIDSLPEATRALPDAELGLIYNDIRNVV
                     EGNIASANPEIGAAAERYSSLRDSSRRIASAAVLVLGLVALIFAYRRIRPEFRARNRV
                     ERVIEYLLIAGSSVAILTTIGIFLSVFFEALLFFRQVSPLEFLFGLSWSPQTAIRADQ
                     VGSSGAFGAVPLFAGTLLISGIAMLVAVPVGLMSAIYLSEYASRRFRAYAKPMLEILA
                     GIPTVVYGYFAALTVAPLLRGFGESVGLDVASESALATGLVMGIMIIPFVSSLSDDVI
                     TAVPQALRDGSYGLGATRSETIRLVVFPAALPGIVGAVLLAVSRAIGETMIVVMAAGL
                     AANLTVNPLEAVTTVTVQIVMLLTGDQEFDSAKTLAAFALGLVLFLVTLTLNVVALRV
                     VRRYREQYE"
     gene            1440..>2243
                     /locus_tag="VIQ99_03320"
     CDS             1440..>2243
                     /locus_tag="VIQ99_03320"
                     /inference="COORDINATES: protein motif:HMM:NF023240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3333 domain-containing protein"
                     /protein_id="HEY9182202.1"
                     /translation="MSEGSAQSVKEAVARGIRRRYRNERVFRALGLTALLIGLGFLAF
                     FFYTLIGNGYTAVLQTRILVDVELDAAVIDPDGRRDPAAIAGADYQRLVRDALQAAFP
                     DVTSRGDLRALFGLLSPGAGIEIQALAVADPSVIGTSRAMWLLADDDVDVLIKGHTPR
                     DVPESDRRLDDRQLGWLTALEQQGRVERQLNRYFFLNGDSRDPELAGIWGATVGSFFM
                     LLVTLALSFPLGVATAIYLEEFAPRNRWTDLVEVNINNLAAVPSIVFGLL"
BASE COUNT          301 a          728 c          753 g          461 t
ORIGIN      
        1 ccgctgcagc tgggcagcca ttgacggcga cgggctgccc cgaccgcgtc cacggtagcg
       61 agacggcgtg gcttcaacga cactcctgat ctcggtggtc ggcctcgcgc tgttcgccta
      121 ctacttcggg cggcagcgcg ccgtcgtgtt ggccattgcc gccgggccgc gcgccttcca
      181 ttcgttgccg ggttatcacg gcggttacgt cgcgctctgg tgcgcgctgc cagcggtcgc
      241 gttgctggtg ctgtggcaga tcttcgagcc cgtgtggttg cgaagcgcgg tgatcgactc
      301 gctgcccgag gcgacgagag cgttgccgga cgccgagctc ggcctgatct acaacgacat
      361 ccgcaacgtc gtcgaaggca acatcgcgag cgcaaacccc gagatcggcg cggcggcgga
      421 gcgctattcg tcgttgcgcg attcgagccg caggatcgcg agcgcggccg tgctcgtctt
      481 gggcctcgtc gccttgatct tcgcctatcg gcgcattcga ccggagttcc gcgcgcgcaa
      541 tcgcgtcgag cgtgtgatcg agtatctact gatcgcgggc tcgtcggttg cgatcctgac
      601 gaccatcggc atctttcttt cggtgttctt cgaggcgctg ctgttctttc ggcaggtctc
      661 gccgctcgag ttcctgttcg gactgtcgtg gagcccacag accgcgattc gcgcggacca
      721 ggtcggctca tccggtgcgt tcggcgccgt gccgttgttc gcgggaacgc tgctgatctc
      781 cggcatcgcg atgctggtcg ctgtgccggt gggcctgatg tcggcgatct atctgtccga
      841 atacgcgagc cgacgctttc gcgcctacgc gaagccgatg ctcgagatcc tggccggcat
      901 ccccacggtc gtctacggct acttcgcggc gttgaccgtg gcgccgttgc tgcgcgggtt
      961 cggcgagagc gtggggctcg acgtcgcgtc ggaaagcgcg ctcgccacgg ggctcgtgat
     1021 ggggatcatg atcattccgt tcgtgtcgtc gctgtcggac gacgtgatca cggcggtgcc
     1081 gcaggccttg cgcgacggtt cctacgggct cggcgccacg cgctccgaga cgattcgctt
     1141 ggtcgtgttt ccggcggcgc tacccggcat cgtgggggcc gtgctgctcg ccgtgtcgcg
     1201 cgcgatcggc gagaccatga tcgtggtgat ggcggccggc ctcgccgcca atctcacggt
     1261 caatccgctc gaagccgtca cgaccgtcac ggtgcagatc gtgatgttgc tcacgggcga
     1321 ccaggagttc gacagcgcca agacccttgc cgcgttcgcg ctcggtctcg tgctattcct
     1381 cgtgacactg accttgaacg tcgtcgcgct gcgcgtcgtg cgccgctatc gagagcagta
     1441 tgagtgaagg ctctgcgcaa tccgtgaagg aagcagttgc gcgcggtatt cggcgccgct
     1501 atcgcaacga gcgcgtgttt cgcgcgctcg gcctcacggc gctgttgatc ggtctcggat
     1561 tcctcgcgtt cttcttctat acgctgatcg gcaacggcta tacggcggtc ctgcagacgc
     1621 gaatcctggt cgacgtcgag ctcgacgcgg ccgtaatcga tccggatggc cggcgagatc
     1681 cggcggccat cgcgggtgcg gattatcaac ggctcgtgcg cgatgcgctg caggccgcct
     1741 tccccgacgt gacgtcgcgc ggcgatctgc gggcgctgtt cggtctcttg agccccgggg
     1801 ccggcatcga gattcaagcg ctcgccgtcg ccgatccatc ggtcatcggc acttcccgcg
     1861 cgatgtggct gttggccgac gacgacgtcg acgtgctgat caaaggacac acaccgcgcg
     1921 acgttcccga gagcgaccga cggctcgacg atcgacagct cggctggctc acggcgctcg
     1981 agcagcaggg acgcgtggaa cgccagctca atcgctattt cttcttgaac ggcgactcgc
     2041 gcgaccccga gctcgccggc atttggggcg cgacggtcgg gtcgtttttc atgctgctcg
     2101 tgacgctggc cttgtcgttt ccgctcggag tcgcgacggc catctatctc gaggaattcg
     2161 cgccgcgcaa tcggtggacg gatttggtcg aggtcaacat caacaatctc gcggccgtgc
     2221 cgtcgatcgt cttcgggctg ctc
//
LOCUS       DATCUD010000234         3220 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94743, whole genome shotgun sequence.
ACCESSION   DATCUD010000234 DATCUD010000000
VERSION     DATCUD010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3220)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3220)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3220
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94743"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..595
                     /locus_tag="VIQ99_03325"
     CDS             <1..595
                     /locus_tag="VIQ99_03325"
                     /inference="COORDINATES: protein motif:HMM:NF012797.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HEY9182203.1"
                     /translation="RAAGADDLLSVASVHAELATAIADCGWVVGASARLRTIPLPIVD
                     PREAAITIWQRLESNRVAVLLGPEQSGLTNDDLARCQQLVHIPTNPEFSSLNLAMAVQ
                     VLCYELRMAAPNRPQPEGPKSDSRLATAAELEGLHEHLERLLTESEFLHPAHQRQVKL
                     KLRRIFHKATLEENELSILRGALTSLDPNNRRPRRSE"
     gene            592..1755
                     /locus_tag="VIQ99_03330"
     CDS             592..1755
                     /locus_tag="VIQ99_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019106083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HEY9182204.1"
                     /translation="MSRAEIYLDYAATSPIDPAVAAAITECLTHEFGNPSSQHAAGKR
                     ARRLVEAAREAIGARVGAPAERLVFTSGATESNNLALHGVLKRSRGRAVHLVTSRIEH
                     KSVLDVARALQANGVAVTYVPSTAGGYVEPERVIAAITADTQLVSIMHVNNETGVIQD
                     IARIGAGCRERGVLFHVDAAQSAGKLPLDLAAWPVDLCSLTAHKLCGPKGVGALYVAP
                     RVTLLPQIQGGEQERGLRAGTLATPQIVGMGKAYELADPAREAPRLAALRDRLWQALR
                     PISGVRQNGDPSRRAPHVLNVAFPGVEGESLRFELRDLAVSAGSACAADSPEASHVLT
                     GIGLSDTLAASSLRFSVGRFTTDEEVVAAATRVEAGVARLRALAKSAPPWCSG"
     gene            1785..2150
                     /locus_tag="VIQ99_03335"
     CDS             1785..2150
                     /locus_tag="VIQ99_03335"
                     /inference="COORDINATES: protein motif:HMM:NF013738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HEY9182205.1"
                     /translation="MEYSPAVVRHFDAPKRAGELPPGTPGLVSGEAEDRTLHVWVRFE
                     LELGEGIVRAAAFQAYGCPHTVAAASIVADWLEGRPVDAARSLDVRALCADLEVPVEK
                     LGKLLRIEDAVADCWRAAP"
     gene            2181..2504
                     /gene="iscA"
                     /locus_tag="VIQ99_03340"
     CDS             2181..2504
                     /gene="iscA"
                     /locus_tag="VIQ99_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011147476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEY9182206.1"
                     /translation="MSISLTSSAATRVRSFIAKRGHGVGLRLGVRRSGCNGWAYTIDY
                     ADSVAPDDVVFEQGGVKVIVAADSLELIDGTEVDFIKEGLNEAFKFRNPNVKGECGCG
                     ESFSV"
     gene            2549..2980
                     /gene="ndk"
                     /locus_tag="VIQ99_03345"
     CDS             2549..2980
                     /gene="ndk"
                     /locus_tag="VIQ99_03345"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015257705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEY9182207.1"
                     /translation="MAVERTFSIVKPDGVAKNLIGEVYRRFEKAGLKVVAAKMIRLRQ
                     DQAEGFYAVHKARPFYADLVRYMISGPVMVQVLEGENAIKVNREIMGATNPKQAAPGT
                     IRADFAASIEENVVHGSDGPETAKTEIGFFFSEAEICPRTR"
     gene            2983..>3220
                     /locus_tag="VIQ99_03350"
     CDS             2983..>3220
                     /locus_tag="VIQ99_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011814577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182208.1"
                     /translation="MPRKDPGKLSLLGMPAANLVELFENLGEKPYRARQIMHWLYQRH
                     VTDYGQMTDLSAALRKQLAEITTLDLPPVLKVEHS"
BASE COUNT          546 a         1000 c         1123 g          551 t
ORIGIN      
        1 gcgggcggcc ggcgcggacg acctgctgag cgtggcgagc gtgcacgccg agcttgcgac
       61 tgcgatcgcc gattgtggct gggtcgtcgg cgcgagcgcg cgtttgcgca cgatcccgtt
      121 gccgatcgtg gatccgcgcg aagccgccat cacgatctgg cagcggctcg agtcgaatcg
      181 cgtcgcggtg ctgcttggcc ccgagcagtc ggggctcacg aacgatgacc tcgcgcgctg
      241 ccagcagctg gtgcacatcc cgacgaatcc ggagttcagc tcgctgaacc tggccatggc
      301 cgtgcaagtg ctctgttacg agctgcggat ggcggcgccg aatcggccgc agcccgaagg
      361 cccgaagagc gacagcaggc tcgcgactgc ggccgagctc gaagggttgc acgagcatct
      421 cgagcgtctg ctcacggagt ccgagtttct gcaccccgcg catcaaaggc aggtcaagct
      481 caagctgcgc cggattttcc acaaggcgac gctcgaggag aacgagctca gcattctgcg
      541 cggcgcgcta acgtcgctcg atcccaacaa ccgccggccg cggcgttccg aatgagccgc
      601 gccgagatct atctcgatta cgcggcgacg tcgccgatcg atccggccgt cgcggccgcg
      661 atcaccgaat gtctgacgca cgagttcggc aacccgtcgt cgcaacacgc ggcgggaaag
      721 cgtgcgcggc gactcgtcga agctgcgcgc gaggcaatcg gcgcgcgggt cggcgcaccg
      781 gccgagcgac tcgtgttcac gtcgggcgcc acggaatcga acaacctcgc gctgcatggc
      841 gtgctgaagc gctcgcgtgg tcgcgccgtg cacctggtca cgtcacgaat cgagcacaag
      901 tccgttctcg acgtcgcgcg tgcgcttcag gccaatggag tcgccgtcac gtacgttccc
      961 tcgaccgcgg gcggatacgt cgagcccgag cgcgtgatcg cagcaatcac cgccgacacg
     1021 cagctcgtct cgatcatgca cgtgaacaac gagaccggag tcattcagga cattgcgagg
     1081 atcggcgccg ggtgccgcga gcgcggtgtg ttgttccacg tcgatgccgc gcagagcgcc
     1141 gggaagcttc cgctcgatct cgccgcttgg ccggtcgatt tgtgctcgct gaccgctcac
     1201 aagctgtgcg ggccgaaggg cgtcggcgcc ctgtacgttg cgccgcgcgt gacgctgctg
     1261 ccgcagattc aaggcggtga gcaggaacga ggtctgcgcg cggggacgct cgcgacgccg
     1321 cagatcgtcg gcatgggaaa ggcctatgag ctcgcggatc cggcccgcga agcgccgcgg
     1381 ctcgcggcgt tgcgcgatcg cttgtggcag gcgctgcgcc cgatctccgg cgtgcgtcag
     1441 aacggcgatc cgagccgtcg tgcgccgcac gtcctgaacg tcgctttccc gggtgtcgag
     1501 ggtgaaagtc tgcgtttcga gctccgcgat ctcgccgtgt cggccggctc ggcgtgcgca
     1561 gccgacagcc ccgaggcttc gcacgtgctg acgggtatcg gcttgagcga caccctggcg
     1621 gccagctcgc tgcgtttcag cgtggggcgc ttcacgaccg acgaggaggt ggtcgcggcc
     1681 gcgacgcgcg tcgaagccgg cgtcgcgagg ctccgtgcgc tcgcgaaatc ggccccgccg
     1741 tggtgctcgg gctgaccttt ttcggctaaa ctattgacct gcctatggaa tacagccccg
     1801 ccgtggtgcg gcatttcgat gcgcccaaaa gggctgggga actgccgccc ggcacgccgg
     1861 gtctcgtgtc gggcgaagcc gaggatcgca cgctgcacgt atgggttcgg ttcgagctcg
     1921 agctcggcga aggtatcgtg cgggccgcgg cattccaggc atacgggtgc ccgcacacgg
     1981 ttgcagccgc gagcatcgtc gccgactggc tcgaggggcg ccccgtcgat gccgcgcgct
     2041 cgctcgatgt tcgggccctg tgcgccgatc tcgaggtgcc ggtcgagaag ctcggcaaat
     2101 tgctgcggat agaggacgcg gtggcggact gttggcgtgc cgcaccgtaa ggaaggccac
     2161 atggtgatgg aaggttactc atgtcgatct cgttgacgag cagcgcagcg acgcgtgtgc
     2221 gtagcttcat cgcgaagcgc ggccacggcg tgggccttag gctcggcgtg cgccggagcg
     2281 gctgtaacgg ctgggcgtac acgatcgatt acgccgacag cgtcgctccc gacgacgtcg
     2341 tgttcgagca gggcggagtc aaggtcatcg tggccgccga cagcctcgag ctgatcgacg
     2401 gcacggaagt ggatttcatc aaggaagggc tgaacgaggc gttcaagttt cgcaacccga
     2461 acgtgaaggg cgaatgcggc tgcggtgaga gcttcagcgt ctgaagcagc aacgattttt
     2521 ttctcaactg tactggacaa ggtgaacaat ggctgtcgag cgtacgtttt ccatcgtcaa
     2581 acccgatggc gtggcgaaga acctgatcgg cgaggtctat cgccgcttcg agaaggccgg
     2641 gctcaaggtc gtcgcggcga aaatgattcg gctgcgtcag gatcaggccg agggtttcta
     2701 tgccgtgcac aaggcgcggc cgttttacgc ggatctcgtg cgctacatga tttcgggtcc
     2761 cgtgatggtg caggtgctcg aaggcgagaa cgcgatcaaa gtgaatcgcg agatcatggg
     2821 cgcgacgaac ccgaagcagg cggcgcccgg cacgattcgc gccgatttcg ccgcgtcgat
     2881 cgaggagaac gtcgtgcacg gctcggacgg cccggagacg gccaagaccg agatcgggtt
     2941 cttcttcagt gaggccgaga tttgtccgcg gacgcgctaa cgttgccgcg taaggacccg
     3001 ggcaagctga gcttgctcgg aatgccggcg gcgaatctcg tcgagctctt cgagaacctc
     3061 ggcgagaagc cgtatcgtgc tcgccagatc atgcactggc tgtatcagcg ccacgtcacg
     3121 gattacggtc agatgacgga cttgagcgcg gcgttacgga agcagctggc cgagatcacg
     3181 acactcgatt tgccgccggt gctgaaagtc gagcattcgg
//
LOCUS       DATCUD010000235         1688 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9352, whole genome shotgun sequence.
ACCESSION   DATCUD010000235 DATCUD010000000
VERSION     DATCUD010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9352"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VIQ99_03355"
     CDS             complement(<1..181)
                     /locus_tag="VIQ99_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182209.1"
                     /translation="MNDSFISKQGFRELVANAFHIYFKNAPTLIAICAAVLLPGYLIT
                     DTVGYFAPDSAKAVQA"
     gene            complement(233..1525)
                     /gene="purD"
                     /locus_tag="VIQ99_03360"
     CDS             complement(233..1525)
                     /gene="purD"
                     /locus_tag="VIQ99_03360"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014705718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEY9182210.1"
                     /translation="MAKVLVIGSGGREHAIAWKLAQSPRVTEVLVAPGNAGTATEAKT
                     RNVPIAVNDFAALIDLARNERVEITIVGPETPLVGGIVDRFEAAGLKCFGPLAAGAQL
                     EGSKAYTKDFLTRHRIPTAAYRTFTEFTAARDYVRRCKPPIVIKADGLAAGKGVIIAP
                     SHADAEATLDSVLRRGQFGSAGAKVVVEDFLTGEEASFIAIVDDLRVVPLASSQDHKT
                     RDDGDRGPNTGGMGAYSPAPVVTAAVHERVMREIMLPTVRGLAADGIRYRGFLYAGLM
                     IDSDGQPRVIEFNCRLGDPETQPILFRLRSDLLDVCSSCFDGTLGTRPLEWDPRATIG
                     VVMASRGYPDAYEKGKPISGLDRATGPAVKVFHAGTRLDGGKVVTDGGRVLCVVGAGT
                     SVRAAREAAYDGVRKITWDGAFYRTDIGYRAVQREESG"
BASE COUNT          254 a          572 c          584 g          278 t
ORIGIN      
        1 acgcttggac cgctttggcg ctgtccggcg caaagtaccc cacggtatcg gtgatgagat
       61 acccgggcag caggacggcc gcgcagatgg cgatcagcgt cggcgcgttc ttgaaataaa
      121 tgtggaacgc attcgcgacg agctcacgaa aaccttgctt cgagatgaag ctgtcgttca
      181 ttgccggtgg tccgaccgaa gccggtctcg ccggcccaag ccattatagg gctcagccgg
      241 actcttcgcg ctggaccgcg cggtagccga tgtcggtgcg gtagaaggcg ccgtcccagg
      301 tgatcttgcg gacgccgtcg tacgcggctt cgcgcgccgc gcggacgctc gtgccggcgc
      361 cgaccacgca cagcactcgt ccgccgtcgg tgacgacctt gccgccatcc aagcgcgtgc
      421 cggcgtggaa gaccttcacg gcggggccgg tcgcgcggtc gaggccggag atgggtttgc
      481 ccttctcgta ggcgtccggg tagccgcggc tcgccatcac gacgccgatc gtcgcgcgcg
      541 ggtcccattc gagcggccgc gtcccgagcg tgccgtcgaa gcacgacgag cagacgtcga
      601 gcaggtccga ccgcagccga aacaggatcg gttgcgtttc ggggtcgccg agccggcagt
      661 tgaactcgat cacgcgcggt tgaccgtccg agtcgatcat gagccctgcg tacaggaagc
      721 cgcggtagcg gatgccgtcg gccgcgagcc cgcgcacggt cggcagcatg atctcgcgca
      781 tgacgcgttc gtgcacggcg gccgtgacga cgggcgcggg cgagtaggcg cccatgccgc
      841 ccgtattggg gccgcgatcg ccgtcgtcgc gcgtcttgtg atcctgcgag ctcgcgagcg
      901 gcacgacgcg caggtcgtcg acgatcgcga tgaagcttgc ttcctcgccg gtcaaaaaat
      961 cctcgacgac gaccttggcg ccggcgctgc cgaattgtcc gcgtcggagc acgctgtcga
     1021 gcgtcgcctc ggcgtcggca tggctcgggg cgatgatcac gcccttgccc gcggcgagcc
     1081 cgtcggcctt gatcacgatc ggcggcttgc acctgcggac gtagtcgcgc gcggccgtaa
     1141 attcggtgaa cgtgcggtac gcggccgtcg gaatccggtg ccgggtcaga aaatccttgg
     1201 tgtatgcctt cgagccctcg agctgcgcgc ccgcagcgag cgggccgaag cacttgagcc
     1261 ccgcagcctc gaaccgatcg acgatgccgc cgacgagcgg tgtctcgggc cccacgatcg
     1321 tgatctcgac gcgttcgttg cgcgcgaggt cgatcaatgc cgcgaagtcg ttgaccgcaa
     1381 tcggcacgtt gcgcgttttc gcttcggtgg cagtgccggc gttcccgggc gcgacgagca
     1441 cctcggtgac gcgcggcgac tgtgcgagct tccacgcgat cgcgtgctcg cgaccgccgc
     1501 tgccgatgac cagaaccttc gccaatcgcg ctccgtgccg tcagtgacgg aagtgccgca
     1561 tgcccgtgaa gaccatcgct agtccacgct cgtcggcggc ctgaatgacc tcctcgtcac
     1621 gcatcgagcc cccgggttga acgacggcgc gcacgccgcg ctcggcggcg gcgtcgacgc
     1681 cgtcgcgg
//
LOCUS       DATCUD010000236         2292 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_37853, whole genome shotgun sequence.
ACCESSION   DATCUD010000236 DATCUD010000000
VERSION     DATCUD010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2292
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37853"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..951
                     /locus_tag="VIQ99_03365"
     CDS             <1..951
                     /locus_tag="VIQ99_03365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEY9182211.1"
                     /translation="AMLLERSPKLLNVHLEHIGSASSYRAVDFRKPVLRNIIRGKLNC
                     HFQDLPVFNGKYSTTCYLDETLYALNDMARRMGRDPSDYYRELAAIFMHRPYHRMPEQ
                     SFAMSYLFGLAQDGPRGRAELTQLCERAKMPVASVIEEMRSRPDILQLVKDGNIDADA
                     YPLSIQLLKEFRSSPEFGALVAAKMSLGSEPMKDIGNVYCAALPAWIAAGIEDAYQRG
                     VDLAGRKVLAVGYGSGDAAEAIPMTVAATWRDAAAKIGFEAALEQHQDLTQIQYENLH
                     DTGTAQGLRDPDEGFVIQSIGSSANPKFSDEGIEYYRFVR"
     gene            complement(968..1591)
                     /locus_tag="VIQ99_03370"
     CDS             complement(968..1591)
                     /locus_tag="VIQ99_03370"
                     /inference="COORDINATES: protein motif:HMM:NF017319.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9182212.1"
                     /translation="MNAHRPVATLSSWFALLVLASQVAPATAADLATDSPTATIATLQ
                     AALVEVARANPTLDERYRLLEPLIVATHNLPYIAEFALRRQWPSLNAADRQRYVAAFQ
                     RLSVMNYAARFGNVAPGAFRPIEAAVPDANGRVRITTGIARESQPDVSFEYLLQQDET
                     GWRIINIVADGVSDLALKRAEYQRLFTSGGLEGLLAELDEQTKRLQE"
     gene            1737..2150
                     /locus_tag="VIQ99_03375"
     CDS             1737..2150
                     /locus_tag="VIQ99_03375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182213.1"
                     /translation="MLAVVGVVALSSGPAAAGHPPSVYPYVRFGFGYPFYHPYYSPWY
                     GPQFGVGIQIGPRHTPSTPKDNSGGQQQALKLYVYPAAGQSDARTAEDRYQCHVWAAG
                     QSGHDPTLGAGTRDEAESYTRALTACMEGRGYVVK"
BASE COUNT          418 a          755 c          750 g          369 t
ORIGIN      
        1 gcgatgctgc tcgagcggag tccgaagctc ttgaacgtgc acctcgagca catcggcagc
       61 gcgtcgtcgt accgggccgt cgacttccgc aagccggtgc tccgcaacat catccgcggc
      121 aagctgaact gccacttcca agacctgccg gtgttcaatg gcaagtattc gacgacctgt
      181 tacctcgacg agacgctgta cgcgctgaac gacatggcgc gccgcatggg ccgcgacccg
      241 tccgactact atcgcgagct cgccgcgatc ttcatgcacc gcccttatca ccgcatgccg
      301 gagcagtcgt tcgcgatgag ctatctgttc ggcctcgcgc aggacggtcc gcgcggccgt
      361 gccgagctca cgcagctgtg cgagcgcgcg aagatgccgg tcgcgagcgt gatcgaggag
      421 atgcgctcac ggcccgacat cctgcagctc gtgaaggacg gcaacatcga tgccgacgcg
      481 tatccgctca gcatccagct gctgaaagaa ttccgcagta gccccgagtt cggcgcgttg
      541 gtcgccgcga agatgtcgct cggctcggag ccgatgaagg acatcggcaa cgtgtactgc
      601 gccgcgttgc cggcctggat cgccgccgga atcgaggacg cgtaccagcg cggcgtggat
      661 ctcgcgggac gcaaggtgct cgcggtcggt tatggcagcg gcgacgcagc cgaggccatc
      721 ccgatgacgg tggctgcgac ctggcgcgac gcggccgcga agatcggctt cgaagcggcg
      781 ctcgagcagc accaagacct cacgcagatc cagtacgaga atctccacga taccggcacc
      841 gcacagggcc tgcgcgaccc ggacgaaggc ttcgtgattc agtcgatcgg cagcagcgca
      901 aacccgaaat tcagcgacga aggcatcgag tactaccgct tcgtgcgctg agcgtcgccg
      961 gccggcctca ctcttgcagc cgtttcgttt gctcgtcgag ctcggcgagc aagccctcca
     1021 aaccaccgct cgtgaaaagc cgttgatact cggcgcgttt cagcgcgagg tcgctgacgc
     1081 cgtcggcgac gatgttgatg atgcgccagc cggtttcgtc ctgctgcaac agatactcga
     1141 acgacacgtc gggttgtgat tcgcgagcga tgcccgtcgt gattcgcacg cgcccattgg
     1201 catcgggcac ggcggcctcg atcggacgaa acgcgccggg cgcgacattg ccgaaacgag
     1261 cggcgtagtt catcacgctc aagcgttgaa acgcagcgac ataccgttgc cgatccgcgg
     1321 cgttcaacga cggccactgg cgacgcagcg cgaactccgc gatgtacggc aggttgtgcg
     1381 tcgcgacgat caacggctcg agcaagcgat agcgctcgtc gagcgtgggg tttgctcgcg
     1441 cgacttccac cagggccgcc tgcaaggttg cgatcgtggc cgtaggcgaa tccgtggcga
     1501 ggtcggcggc cgtcgcgggt gcaacctgcg acgcgagcac gagcaacgcg aaccacgagc
     1561 tcagggtggc cacggggcgg tgagcattca tgcggcgaat tgtttcatgc gacgcgcgac
     1621 tccggccagt cggggacgaa cgagcattca gctaccgttc aggaaagacg ccctagcttc
     1681 gcctggcaag gcgagctgcg cctgcgtgta gccggagccg agtcatgcgc ccatggatgc
     1741 ttgccgtcgt tggtgtcgtc gccttgtcga gcggaccggc tgcggcgggc cacccgccat
     1801 cggtctaccc gtacgtgcgg ttcgggttcg gctatccgtt ctatcacccg tactactcac
     1861 catggtacgg cccgcaattc ggtgtcggca tccaaatcgg gccgcgccat acgccgagca
     1921 cgccgaagga caacagcggc gggcaacagc aagcattgaa gctctacgtc tacccggcgg
     1981 ccgggcagag cgacgccagg acggccgagg accgctacca gtgccacgtt tgggccgcgg
     2041 gccagtcggg ccacgatccg acactcggcg cgggcacgcg cgacgaggca gagagctaca
     2101 cgcgcgcgct cactgcctgc atggagggcc gcggctatgt cgtcaaatag acacgtcgca
     2161 acactcgctg ccgcattgct cgcgaccggg gtgcctgcgc tcgcgatcga ggatctcggc
     2221 gcgttggagg tcgtcgggct gcgcggtcaa tcgcccgacc aaacacgacg cgaccgctac
     2281 gagtgccaca ac
//
LOCUS       DATCUD010000237         2153 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66402, whole genome shotgun sequence.
ACCESSION   DATCUD010000237 DATCUD010000000
VERSION     DATCUD010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66402"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1234
                     /locus_tag="VIQ99_03380"
     CDS             <1..1234
                     /locus_tag="VIQ99_03380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsK/SpoIIIE domain-containing protein"
                     /protein_id="HEY9182214.1"
                     /translation="VEIIPGKPYVGLEIPNEVREIVALGEIVKSQAYDELKSPLTLAL
                     GKDIGGAPMVADLGRMPHLLIAGTTGSGKSVALNAMVLSLLYKSTPEHVRLIMIDPKM
                     LELSVYEGIPHLLAPVVTDMKQAANALRWCVAEMERRYALMAGLGVRHLSSYNRKVNE
                     AIASGTPLVDPTFVPEQEGDTAPELAPMPFIVVIIDELADMMMMVGKKVEELIARLAQ
                     KARASGIHMIVATQRPSVDVITGLIKANIPCRIAFQVSAKVDSRTILDQIGAEHLLGH
                     GDMLYLPSGTSMPIRVHGAFVSDNEVHAVVKALRAHGEPNYIDNVLEGPSGEVMGLEP
                     TAPTGELDGEQDPLYDQAVRIVTETRKASISGIQRRLKIGYNRAARMVETMEEAGIVG
                     NLQTNGFREVLAPPPVVD"
     gene            1254..1853
                     /gene="lolA"
                     /locus_tag="VIQ99_03385"
     CDS             1254..1853
                     /gene="lolA"
                     /locus_tag="VIQ99_03385"
                     /inference="COORDINATES: protein motif:HMM:TIGR00547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEY9182215.1"
                     /translation="MLAGSGAFAQPTQNGPATLEAFLDGVHSLTADFRQEIWTADQRL
                     LQTETGTLALERPNRFRWLYKDPTELTVVADGQQLWIYDVELEQVTVAPFDSSVGVSP
                     AMLLSGDRSVREGFDVVDSYPAEGFQWVKLTPKTGGGDFSSVLIAFDGTTPRRLELVD
                     GLNQVTRIELDHLAVNPELDDDVFEFDVPAGVDVIGDEG"
     gene            1860..>2153
                     /locus_tag="VIQ99_03390"
     CDS             1860..>2153
                     /locus_tag="VIQ99_03390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEY9182216.1"
                     /translation="MLPLRFPKWWAGLGWLLVLGVIVGSLLPGRALPDVSMNDKFGHA
                     AAYCVLMVWFAGLYPRRLYLLIAAVLLALGIGLDLLQGLTETRSLELLDIAADL"
BASE COUNT          370 a          685 c          706 g          392 t
ORIGIN      
        1 cgtcgaaatc atccccggca agccctacgt cggtctcgag atcccgaacg aggtacgcga
       61 gatcgtcgcg ctcggcgaga tcgtgaagtc gcaagcctac gacgagctca agtctccgct
      121 gacgctcgcg ctcggcaaag acatcggcgg agcgccgatg gtggccgacc tcgggcggat
      181 gcctcacctc ttgatcgcgg gcaccacggg ctcgggcaag tccgtcgcgt tgaacgcgat
      241 ggtgctgagc ctgctctaca agtccacgcc cgagcacgtg cggctcatca tgatcgatcc
      301 gaagatgctc gagctctcgg tatacgaggg cattccgcac ctgctcgcgc cggtcgtcac
      361 ggacatgaag caagcggcga acgcgctgcg ctggtgcgtg gccgagatgg agcgccgtta
      421 cgcgttgatg gcgggcctcg gcgtgcgcca tctgtcgagc tacaaccgca aggtcaacga
      481 ggcgatcgcg agtggaacgc cgctcgtcga tccgacattc gtgccggagc aagagggcga
      541 caccgcgccg gagctggcgc cgatgccgtt catcgtcgtg atcatcgacg agctcgccga
      601 catgatgatg atggtcggca agaaggtcga agagctgatc gcgcggttgg cgcagaaggc
      661 gcgcgcatcg ggcatccaca tgatcgtcgc gacgcagcgc ccctcggtcg acgtgatcac
      721 gggcctgatc aaggccaaca tcccgtgccg gattgcgttc caggtctcgg ccaaggtcga
      781 ttcacgcacg atcctcgacc agatcggcgc cgagcacctg ctcgggcacg gcgacatgct
      841 gtacttgccc tcgggcacct cgatgccgat tcgcgtgcac ggtgcgttcg tgtcggacaa
      901 cgaggtccat gccgtggtca aagctctgcg cgcgcacggt gagccgaact acatcgacaa
      961 cgtcctcgaa ggccccagcg gcgaggtgat ggggctcgag ccgacggcgc cgaccggcga
     1021 attggacggc gaacaagatc ccctctacga tcaagccgtt cgcatcgtga ccgagacgcg
     1081 caaggcttcc atctccggta ttcagcgccg gctgaagatc gggtacaacc gcgcggcgcg
     1141 gatggtcgaa accatggaag aggccggcat cgttggcaac ctacagacga atggattccg
     1201 ggaagttctg gcgccgccgc cggtcgtcga ttaggttcat cctgctctat tccatgctcg
     1261 ccgggagcgg tgcgttcgcg cagccgacgc agaacggtcc cgcgaccctc gaggcctttc
     1321 tcgacggcgt tcattcgctg acggccgact tccgtcaaga gatctggacc gcggatcagc
     1381 ggctgctcca gaccgaaacc ggaacgttgg cgctcgagcg accgaaccgc tttcgctggc
     1441 tgtacaaaga ccccaccgag ctcaccgtgg ttgcggacgg ccagcagctc tggatctacg
     1501 acgtcgagct ggagcaggtc acggttgcgc cgttcgattc gagtgtcggc gtgagccccg
     1561 ccatgctctt gagcggtgat cgcagtgttc gcgaggggtt cgacgtcgtc gactcctatc
     1621 ccgccgaggg attccagtgg gtcaagctca cgccgaagac cggcggcgga gatttcagct
     1681 ccgtgctgat cgcgttcgac ggcactacgc ctcggaggct cgagctcgtt gacggcttga
     1741 atcaagtgac gcgcatcgag ctcgaccacc tcgcggtgaa cccggagctc gatgacgacg
     1801 tcttcgagtt cgacgtgccc gcgggcgtcg acgtcatcgg cgacgaaggc tgacccgttt
     1861 tgttgccgtt gcgctttccg aagtggtggg cggggctcgg ttggctgctc gtcctcggcg
     1921 taatcgtcgg tagcctgttg ccgggccgtg cgctgcccga cgtgtcgatg aacgacaagt
     1981 tcgggcatgc cgccgcgtat tgcgtgctga tggtgtggtt cgcgggactg tacccgcgac
     2041 gcctgtactt gttgatcgcc gccgtgttgc tcgcgctcgg catcggcctc gatttgctcc
     2101 agggcctcac cgaaacgcgg tcgctcgagc tgctcgacat cgccgccgac ttg
//
LOCUS       DATCUD010000238         1830 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9378, whole genome shotgun sequence.
ACCESSION   DATCUD010000238 DATCUD010000000
VERSION     DATCUD010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9378"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VIQ99_03395"
     CDS             <1..594
                     /locus_tag="VIQ99_03395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182217.1"
                     /translation="VLMRLADATPLLIERAIGDGRVLVFTSSLDREWNDLPVQTAFVP
                     LMAGIANELLGGAGFTSEADLGSTLAVRALGLSGGQIFDPRGEPALGLGAGSDDVVLD
                     QIGFYEVVGGGVTEVVAVNFDPRESDLTPIDAATLDRWRGLGVRADDQAQTAVTGTEE
                     SVPSSLGPWLVLLLLALVVMESAVGNWHLRIRRGVAA"
     gene            591..>1830
                     /locus_tag="VIQ99_03400"
     CDS             591..>1830
                     /locus_tag="VIQ99_03400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182218.1"
                     /translation="MTAQSQLEAYLGEFRKRLQALIVARGAALLAVAALVVTLTAVYF
                     GIRRAFDPQIVYAARVVLIGALAGIAIWLVLRPLRSLKRSRGIQDIERRAPDFDGRLE
                     TYDGIAHGPAERATPFLGLLAEDALKLARRIPVALKIPDLEVRAPAALAVIAVALLVG
                     TALFGPANWRYGVQNLWAGWLVEDTLPPQYLAVLPGDATVRRGGDLRVDASAEGFEPS
                     RMEVFAQFRAGGEWQSATMDRTADGSFNFTFFALREPMRYYVVAAGLRSQEFAVDVVD
                     LPRITNLKLTYHYPNWTKLEPVVVEPGDDIRAVEGTQVTVELTTDQPLEASELVVDGQ
                     RIAMQTVDGVNSATLEVTKDGEYFVSTLFNGDSVKLTDDYLISLIADNKPVVKVVKPG
                     RDWRASNIEEVTVRVEANDDF"
BASE COUNT          275 a          600 c          645 g          310 t
ORIGIN      
        1 gtgctgatgc ggctcgcgga cgcgacgcct ctcctgatcg agcgcgcaat cggtgacggg
       61 cgcgtgctcg tgttcacatc ctcgctggac cgcgagtgga atgatctacc cgtgcagacc
      121 gcattcgtgc cgctgatggc cggtatcgcg aacgagctgc tgggcggggc cggcttcacg
      181 agcgaggcag acctcggcag cacgctcgcg gtgagggcgt tgggcctgtc gggcgggcag
      241 atcttcgatc cgcgcggcga gccggcgctc gggctcggtg ccggcagcga cgacgtcgtg
      301 ctcgatcaaa tcgggttcta cgaggtcgtg ggcggcggag tgaccgaggt cgtggccgtg
      361 aacttcgacc cccgcgaatc ggacctaacc cccatcgatg ccgcgacgct cgaccgctgg
      421 cgcggcctcg gcgtccgggc ggatgaccag gcgcagaccg ccgtcacggg caccgaggag
      481 tcggtgccga gctcgctcgg gccgtggctc gtgttgctgt tgctcgcgct cgtggtcatg
      541 gaatccgcgg taggaaactg gcatcttagg attcgaagag gagttgcagc atgacggccc
      601 agtcgcagct cgaagcctac ctaggcgagt tccgcaaacg cttgcaggcg ttgatcgtcg
      661 cacgcggcgc ggccttgctc gcggtcgctg cgctcgtcgt cacgctcacg gccgtgtact
      721 tcggcatccg ccgagctttc gatccgcaga tcgtctatgc cgcgcgcgtc gtgctgatcg
      781 gcgccctcgc cggaatcgcg atctggctcg tgctgcggcc gctgcgctcg ctgaagcgta
      841 gccgcggcat tcaagacatc gagcgccgcg cgccggactt cgacggccgc ctcgagacct
      901 acgacggcat cgcgcacggg cccgccgagc gcgctacccc gttcctcggc ctcttggccg
      961 aagacgcctt gaagttggcg cgccgcattc cggtcgcgct gaagattccg gatctcgagg
     1021 tgcgggcgcc ggccgcgctc gcggtgatcg ccgtcgcgct gctggtcggc acggcgttgt
     1081 tcggtcccgc gaactggcgc tatggcgtgc agaacctgtg ggccggttgg ctcgtcgagg
     1141 acacgctgcc gccgcagtac ctcgcggtgc tgcccggcga cgccacggtc cggcggggcg
     1201 gcgacctccg cgtcgacgcc agtgccgagg gcttcgagcc gtcgcggatg gaagtgttcg
     1261 cgcagttccg agcgggcggc gaatggcaga gcgcgacgat ggatcgcacc gccgacggca
     1321 gcttcaactt cacgttcttc gcgctgcgcg agccgatgcg ctactacgtg gtggcggcgg
     1381 gcctgcgcag ccaggagttt gccgtcgacg tcgtcgacct gccgcggatc acgaatctca
     1441 agctcacgta tcactatccg aactggacca agctcgagcc ggtcgtcgtc gagcccggtg
     1501 acgatattcg cgccgtcgag ggcacgcagg tcacggtcga gctgacgacg gatcagccgc
     1561 tcgaggcgtc ggagctcgtc gtcgacggcc agcgcatcgc gatgcagacc gtggacggcg
     1621 tgaactccgc gacgctcgag gtcacgaagg acggcgagta cttcgtctcg acgctgttca
     1681 acggcgactc cgtgaagctc acggacgact atttgatctc gctgatcgcg gacaacaagc
     1741 ctgtcgtgaa ggtggtgaag ccgggccgcg actggcgcgc gagcaacatc gaagaagtca
     1801 ccgtgcgcgt tgaagcgaac gacgacttcg
//
LOCUS       DATCUD010000239         2722 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94801, whole genome shotgun sequence.
ACCESSION   DATCUD010000239 DATCUD010000000
VERSION     DATCUD010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2722
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94801"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..1242)
                     /locus_tag="VIQ99_03405"
     CDS             complement(85..1242)
                     /locus_tag="VIQ99_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018292282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY9182219.1"
                     /translation="MERDQAVRLTQNLLKKMVENNGSDLFITADFPPAIKIDGTIRPF
                     ADRPLTAAQSSLIVRSIMNDKQAKEFDATKECNFAIAPQGIGRFRVSAFVQQGHVGAV
                     IRTIVTKIPSFEDLDLPPQLKDVAMTKRGLCLVVGGTGSGKSTTLAAMIGHRNENSRG
                     HIITIEDPVEYVHPHRGCVVTHREVGVDTDNWYNALKNTLRQAPDVIMIGEIRDQDTM
                     NYAIQFAETGHLCVATLHANSANQALDRIINFFPEERRHQLLMDLSLNITAMISQRLL
                     PRENKMGRIAAMEIMLASPLISDLIFRGEVAMIKDIMAKSNRLGMQTFDQALFQLYED
                     AAISYEEAMRNADSKNELRLKIKLQSKREGSAAAEQGESLQLAEEEKGNTF"
     gene            complement(1289..2332)
                     /locus_tag="VIQ99_03410"
     CDS             complement(1289..2332)
                     /locus_tag="VIQ99_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008483697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEY9182220.1"
                     /translation="MAAVDIAQLLAFAVKNNASDLHLSSGVPPIIRVDGDVKRINMPA
                     LKHKEVHSMVYDIMNDKQRKDFEEFLETDFSFEIPKLARFRVNAFNQNRGCAAVFRTI
                     PSVILSLDDLGAPRIFKDISMHPRGLVLVTGPTGSGKSTTLAAMVDYVNDNKPDHIIT
                     IEDPIEFVHESKRSLINQRELHRDTHGFSEALRSALREDPDVILVGEMRDLETIRLAL
                     TAAETGHLVFGTLHTSSAAKTIDRVVDVFPAAEKEMVRSMLSESLRAVISQTLLKRVG
                     GGRIAAHEIMIGTPAIRNLIREGKIAQMYSAIQTGQAQGMQTLDQNLQELMMKGLITK
                     EEARFKAVNKESF"
     gene            2417..>2722
                     /locus_tag="VIQ99_03415"
     CDS             2417..>2722
                     /locus_tag="VIQ99_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018419463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate enzyme"
                     /protein_id="HEY9182221.1"
                     /translation="MTEITEHLREIVERVARASTSSGRSADSVTIVAVSKGQPATAVA
                     AAHRAGLRHFGESYVQEALEKIAALAGLDVTWHFVGKLQTNKTRQVAERFDWVHTVDR
                     "
BASE COUNT          489 a          802 c          850 g          581 t
ORIGIN      
        1 aaaaaggtcg gacgccttct tatcgaccat caacttgaaa agaggtttga cgttcatgcg
       61 gaggacgaat agccgcgcgg gcggctagaa tgtattgccc ttctcttctt cggccaattg
      121 caggctctcg ccctgctcgg ctgcggccga tccctcgcgc ttgctttgca gcttgatctt
      181 gaggcgcagc tcgttcttcg aatcggcgtt gcgcatggcc tcttcgtacg agatcgcggc
      241 gtcctcgtag agctggaaca gtgcctggtc gaatgtctgc atgccgaggc gattcgactt
      301 ggccatgatg tccttgatca tggcgacctc gccgcggaag atcaggtcgc tgatcagcgg
      361 cgaagccagc atgatctcca tcgccgcgat acgccccatc ttgttctcac gcggcaagag
      421 ccgctgcgag atcatcgccg tgatgttcaa cgacaggtcc atcagcagct ggtggcgccg
      481 ctcctcgggg aagaagttga tgatgcggtc gagcgcctgg ttggcgctgt tcgcgtgcag
      541 cgtcgcgacg cataagtggc cggtctcggc aaactgaatc gcgtagttca tcgtgtcctg
      601 gtcacggatc tcgccgatca tgatgacgtc tggtgcctga cgcagcgtat tcttcagcgc
      661 gttgtaccaa ttgtcggtgt cgacgccgac ctcgcggtga gtcacgacac aaccgcggtg
      721 cggatgcacg tactcgaccg ggtcctctat cgtgatgatg tggccgcggc tattctcgtt
      781 gcggtggccg atcatcgcgg cgagcgtcgt cgacttaccg gagcccgtgc cgcccacgac
      841 caggcacagg ccgcgcttcg tcatcgcgac gtctttgagc tgtggcggca aatcgaggtc
      901 ctcgaacgac gggatcttcg tgacgatcgt gcggatgacc gcgccgacgt gaccttgctg
      961 gacgaaggcg ctgacgcgga agcggccgat gccctgcggc gcaatcgcga aattgcattc
     1021 ctttgttgcg tcgaattcct tggcctgctt gtcgttcatg atcgagcgaa cgatcagcga
     1081 gctctgcgcc gccgtcagcg gccgatccgc gaacgggcga atagtgccgt cgatcttgat
     1141 ggccggtgga aagtctgccg tgatgaagag gtcggaaccg ttgttctcga ccatcttctt
     1201 cagcagattc tgcgtcagtc gtactgcttg atcgcgttcc attgcgacgc gctcctattg
     1261 agatcccggc agcgagccag ccgagcggct agaagctctc tttgttcacg gccttgaagc
     1321 gagcctcttc cttcgttatg aggcccttca tcatgagctc ctgcagattc tggtcgagcg
     1381 tctgcatgcc ctgcgcttgg cccgtttgaa tcgcggagta catctgcgcg atcttgcctt
     1441 cacgaatcag gttacggatg gcgggagtgc cgatcatgat ctcgtgagcg gcgatgcggc
     1501 caccgccgac gcgcttcagc agcgtttgcg agataacggc gcgcagcgac tcggatagca
     1561 tgctgcggac catctccttc tcggccgccg gaaacacgtc gacgacgcgg tcgatggtct
     1621 tcgcggcgga gctcgtgtgc aacgtgccga acacgaggtg gcccgtttcg gccgcggtca
     1681 gcgccagacg aatcgtctcg aggtcgcgca tctcgcctac gaggatcacg tcggggtcct
     1741 cgcgcaaagc cgaccgcagc gcttcgctga agccgtgcgt gtcgcgatgc agctcgcgct
     1801 ggttgatcag agaacgtttg ctctcgtgca cgaattcgat cgggtcttcg atcgtgatga
     1861 tgtggtccgg tttgttgtcg ttgacgtagt cgaccatcgc cgcgagcgtc gtcgacttac
     1921 cggagcccgt cggacccgtc acgagcacca agccgcgcgg gtgcatcgaa atgtccttga
     1981 agattcgcgg cgcgccgagg tcgtcgaggc tcaggatcac cgacggaatc gttctgaaca
     2041 ccgcggcgca gccgcggttc tgattgaacg cgttcacgcg aaagcgcgcg agcttgggaa
     2101 tctcgaacga gaagtcagtc tccaagaact cttcgaagtc cttgcgctgc ttgtcgttca
     2161 tgatgtcgta aaccatactg tgcacttctt tgtgcttcag tgctggcatg ttgattcgtt
     2221 tgacgtcgcc gtcgacgcga atgatcggcg gcacacccga tgacaagtgc aggtccgacg
     2281 cgttgttctt gacggcgaat gcgagcaatt gcgcaatgtc taccgcggcc atggcactcc
     2341 tctagcacgg gccctagccc ctaggtcagg ggctacataa gaagttgaca gtatagccaa
     2401 gggctaccgg caaagcgtga ctgaaatcac ggagcatttg cgggaaatcg tcgagcgcgt
     2461 agcgcgcgcg agcacgagct ccggtcgatc cgcggacagc gtcacgatcg tcgcggtcag
     2521 caagggacag ccggccaccg cggtcgcggc ggcgcatcgt gccgggttgc ggcacttcgg
     2581 cgaaagctac gttcaagaag cgttggaaaa gatcgctgct ctcgccggcc tcgatgtcac
     2641 ttggcacttc gtcggcaagc tgcaaacgaa caagacgcgg caagtggccg agcgattcga
     2701 ttgggtgcac acggtggatc gg
//
LOCUS       DATCUD010000240         7161 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101788, whole genome shotgun sequence.
ACCESSION   DATCUD010000240 DATCUD010000000
VERSION     DATCUD010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 7161)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7161)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7161
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101788"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..349
                     /gene="xseB"
                     /locus_tag="VIQ99_03420"
     CDS             98..349
                     /gene="xseB"
                     /locus_tag="VIQ99_03420"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015571292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY9182222.1"
                     /translation="MTATDKNNGLSGLEKSLEELEALVTRLEAGDLPLEQALKEFEHG
                     VKLTRRCQAALQEAEQKVEILLKKTATAEPSPFTPSTDD"
     gene            complement(359..1675)
                     /locus_tag="VIQ99_03425"
     CDS             complement(359..1675)
                     /locus_tag="VIQ99_03425"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9182223.1"
                     /translation="MAKANAPAPVEKRASRDVPERIGKYVIINEVGQGSTGRVFLSHD
                     PYYGRDVAIKLYNIESEEDEQKARVTRKMFFNEAQMMGRLQHPNILPIYDAGEENGSY
                     YVVTEHVHGARTLNAYCRPDNLLRVDDVVEILFKCAKGLHYAHGRGVIHRDIKPSNIM
                     LTLDNDVRIIDFGIALIKDSDVSRIEGIAGSPSYMSPEQVQSAEITHKSDIYSLGAVM
                     YELLTGYRPFRANSLSKLLHQIVYATPPPIHTLREGIPEEIENVVTTALLKEPEQRFA
                     SAIDFAGALTKLHQKLRSQSDRLDRQEQFDLLRKLRFFHDFSHAEIWEVLRASEWCTY
                     QADDEIIREGELDDRFYIIVNGSVSVESGRRQTGVLGDGDCFGEASYVRGARRTATIK
                     ATGPLTLVRVSSTLLEQSSSACQLRFNKVFLRSLIERLQGIAPTAT"
     gene            complement(1681..2151)
                     /locus_tag="VIQ99_03430"
     CDS             complement(1681..2151)
                     /locus_tag="VIQ99_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007148510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEY9182224.1"
                     /translation="MSALRDPVHFLAFGFGAGLLPRAPGTWGSVVALPAVWWLVDLPW
                     SWRIGVVVAVIGAGIFICGESARRLGRHDDQRIVLDEISGVLLTGLAVTEKSLVLLAL
                     VFVFFRFFDIAKPWPIRDVDHSLKGGLGIMLDDLIAAVFAAACVVTIEVVLPTI"
     gene            complement(2170..3123)
                     /gene="thiL"
                     /locus_tag="VIQ99_03435"
     CDS             complement(2170..3123)
                     /gene="thiL"
                     /locus_tag="VIQ99_03435"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEY9182225.1"
                     /translation="MIGEFEIIARYFTRDSHDPDVVLGVGDDAAVLAIDGLAAVTVDT
                     LVAGVHFPDGMAPELLGYRLMAVNLSDLAAMGAEPKWCTLALTLPKADELWLEGFSRG
                     LFELAERYGVSLVGGDLTRGPLTLTLQLIGRIDRSRMLTRGGGHVGDDVYVTGTLGDS
                     SAGIALIMERSAAPAGSAAAALKQRFERPVPRVGAGLALGPLATAAIDISDGLLADLG
                     HVCKASGCGATIDVERVPLSAELLSLFPPQEALAHALGGGDDYELLFTAPPSRAEEIE
                     AALEASGTRFRRIGQLVEGQAVVCRRDGEPFVPATRGYRHF"
     gene            complement(3120..3569)
                     /gene="nusB"
                     /locus_tag="VIQ99_03440"
     CDS             complement(3120..3569)
                     /gene="nusB"
                     /locus_tag="VIQ99_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY9182226.1"
                     /translation="MAHASSARARHLARELLVKALYQWQIAGHGVAEISAQFAGLPDF
                     ARCDRDFFAELLPVVVDDSAALDALISRHAARGIEQLDAVGRAILLLSLAELKFRNDV
                     PTKVVINEAVELAKRYGATDSYKFVNAVLDKTSRELRGGGAAAQGKA"
     gene            complement(3573..4052)
                     /gene="ribE"
                     /locus_tag="VIQ99_03445"
     CDS             complement(3573..4052)
                     /gene="ribE"
                     /locus_tag="VIQ99_03445"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEY9182227.1"
                     /translation="MDDRIKTLEGDFNARGLRFGIVASRFNDFIVDRLLDAAVGTLLK
                     HGVAAGDIEVVRVPGAFETPLAIKKLASSRRYQALIALGCVIRGATPHFDYVAGEASR
                     GIAQVSLADEIPIGFGILTVDTIEQAIERAGTKAGNKGADAALAAIQMATVLRQLEQ"
     gene            complement(4045..5211)
                     /gene="ribBA"
                     /locus_tag="VIQ99_03450"
     CDS             complement(4045..5211)
                     /gene="ribBA"
                     /locus_tag="VIQ99_03450"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020648184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HEY9182228.1"
                     /translation="MATHASTDSAFGLDTIEDIVAAIRAGEMVVILDDEDRENEGDLV
                     MAATKVRAEDVNFMAKYGRGLICLTLTRERCEQLRLPLMVRDTDVRQTTNFTISIEAA
                     EGVTTGISAHDRARTIQAAVEPNAAPRDLRQPGHIFPLMAQPGGVLTRAGHTEAGCDL
                     VRLAGLEPAAVIVEILNEDGAMARRDDLLRFARRHDLKIGTIADLIEYRLRTEQSVEV
                     ISESDVATELGAFRLVCFEDHVNRAVHLALVRGKLDAKTPTLVRVHRQDTLSDVLGLT
                     APTLHRPLRDALRLIAEQDHGVAVILRPEESARDLVRSVQSLSQPPEPEVGARRGRSM
                     DFRTFGIGAQILRVLGVRRMRVIGAPKQMHALSGFGLEVVDYVSDAAEREDTHG"
     gene            complement(5195..5839)
                     /locus_tag="VIQ99_03455"
     CDS             complement(5195..5839)
                     /locus_tag="VIQ99_03455"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEY9182229.1"
                     /translation="MFSGLVKGIGRVATRTDLGPDRRFVIELGTAAIPPLAVGGSIAV
                     NGVCLTAVAVTPQDFTADVSAETLAVTTLDALRPGSRVNLEPPLKAGDPLDGHLVTGH
                     VDGVGKVVEIAPVGRSQRLLIGVPAALSRYIAAKGSVAVDGVSLTVNAVRGTELEVNV
                     IPHTQAVTVIGEYRPGTAVNIEVDLMARYLERLVQTGAEGGLDLATLRKHGYAR"
     gene            complement(5857..6984)
                     /gene="ribD"
                     /locus_tag="VIQ99_03460"
     CDS             complement(5857..6984)
                     /gene="ribD"
                     /locus_tag="VIQ99_03460"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013028791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEY9182230.1"
                     /translation="MADAIDHEHMAAALKLAANGLYDTKPNPTVGCVLVKDGRVVGTG
                     WTAPAGGPHAERVALSAAGAAARGATAYVTLEPCCHTGRTGPCTRALIEAGVARVVFA
                     GHDPNPKVDGGGAKELAAAGIAVEGGIMERAAEPLNRGFFARMRRGTPWVRSKLAVSL
                     DGRTALANGASQWITSASARADVHRWRALSGAVLTGSGTIVDDDPSLDARRDEAGIAA
                     ELGIKQPLRVIVDAVLKTPPTAKTLSLPGEVIVLTTRDRDDPKARALRAAGARVETVA
                     GNAAHCDLEAVLERLAALEVNDVWVEAGAGLNGALLDTELIDELIIYMAPRLLGDAAR
                     GMFVLPAIESLAESRNVVFEDIRQVGADLRITARVSRVAGA"
     gene            complement(7006..>7161)
                     /locus_tag="VIQ99_03465"
     CDS             complement(7006..>7161)
                     /locus_tag="VIQ99_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013220110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY9182231.1"
                     /translation="DEVAYVRFASVYRSFQDVTEFQQEIERLQSLPSLLESREQMSLL
                     PDEQRKK"
BASE COUNT         1215 a         2472 c         2301 g         1173 t
ORIGIN      
        1 agcctattcc gcgcgatgaa atcttgtcaa ctcgcgcgtt tgaactttcg cggcacgctg
       61 tgtaccgtgg ccgcctccgc catcgctgtg actttggatg actgcgaccg acaagaacaa
      121 tggcctgagc ggcctcgaaa aatcgctcga ggagctcgag gcgctcgtca cgcgcctcga
      181 ggccggcgac ttgccgctcg agcaggcgct gaaagagttc gagcacggag tgaagctcac
      241 acggcgttgt caggccgcgc tgcaggaagc ggagcagaag gtcgagattc ttctgaagaa
      301 gaccgctacg gccgagccga gcccgttcac gccttcgacg gacgactgac cgcgcgcctt
      361 aggtcgcggt cggagcgatt ccctggagcc gctcgatcag cgagcgcaag aacaccttgt
      421 tgaagcgcaa ttggcacgcc gacgacgact gctcgagtag cgtcgagctc acgcgcacga
      481 gcgtcagcgg tcccgtggcc ttgatcgtcg cggtgcggcg ggctccgcgc acatagctcg
      541 cctcaccgaa gcaatctccg tcgccgagca cgccggtctg ccggcgaccg gactcgacgc
      601 tgacggagcc gttcacgatg atgtagaaac gatcgtcgag ctcgccctcg cgaatgatct
      661 cgtcatcggc ctggtacgta caccattcgc tcgcgcgcag cacttcccaa atctcggcgt
      721 gcgagaagtc gtggaagaag cgcagcttgc gcagcaaatc gaactgctct tgccggtcga
      781 gacggtcgga ctggctccgc agcttctggt gcagcttcgt cagcgcgccc gcgaagtcga
      841 tcgcgctcgc gaaacgctgc tccggctcct tcaagagcgc cgtcgtgacg acgttctcga
      901 tctcttccgg gatgccttcg cgcagcgtat ggatcggcgg cggtgtcgcg tacacgatct
      961 ggtgcagcag cttgctcaag gagttcgcgc ggaacggccg atagcccgtc aacagctcgt
     1021 acatgaccgc gccgagggaa tagatgtcgg atttgtgcgt gatctccgcc gactgcacct
     1081 gctccggcga catgtagctc gggctaccgg cgatgccttc gatgcgcgag acgtcggagt
     1141 ctttgatcag cgcgatgccg aaatcgatga tgcgcacgtc gttgtcgagc gtgagcatga
     1201 tgttgctggg cttgatgtcg cggtggatca cgccacgccc gtgcgcgtag tgcaaaccct
     1261 tcgcgcactt gaacaagatc tcgacgacgt cgtcgacgcg aagcaggttg tcgggccggc
     1321 aataagcgtt cagcgtgcgc gcaccgtgca cgtgctcggt gacgacgtaa tagctgccgt
     1381 tctcttcacc ggcatcgtag atcggcagga tgttgggatg ctggaggcgc cccatcatct
     1441 gcgcctcgtt gaagaacatc ttgcgagtga cgcgggcctt ctgctcgtct tcctcgctct
     1501 cgatgttgta gagcttgatc gcgacgtcgc gcccgtagta cgggtcgtgc gacaggaata
     1561 cgcgaccggt gctgccctgc ccgacctcgt tgatgatcac gtacttgcca atgcgctcgg
     1621 gcacgtcacg ggaggcgcgc ttctcgacgg gcgctggggc gttggccttg gccatggcag
     1681 ctagatcgtg ggcagcacaa cttcgatcgt tacgacacag gcggccgcga aaacggccgc
     1741 aatcaggtcg tcaagcataa ttccgaggcc gccttttaga ctgtgatcca catcgcggat
     1801 cggccagggt ttcgcgatgt cgaaaaacct aaagaataca aacactagcg ccagcaggac
     1861 gaggctcttt tccgtgaccg caagacccgt caggagcacg cccgagatct cgtcgagaac
     1921 gatgcgttga tcgtcgtgcc tgccgagccg gcgggcgctc tcgccgcaga tgaagatccc
     1981 ggcgccgatc acggcgacca cgacgccgat ccgccacgac cacggcagat ccacgagcca
     2041 ccataccgcc ggcagcgcga cgacgctgcc ccaagtgccg ggcgcgcgcg gcaagaggcc
     2101 ggcgccgaaa ccgaaggcga gaaagtgcac cggatcgcgc agcgcgctca cggccttccc
     2161 ggcgcgccgc tagaaatgtc ggtagccacg cgtagcggga acgaacggct cgccgtcgcg
     2221 ccggcacacg acggcttggc cttccacgag ctggccgatg cggcgaaacc gcgtgcccga
     2281 agcctcgagc gccgcctcga tctcctcggc gcgcgacggc ggcgccgtga acagcagctc
     2341 gtagtcgtcg ccgccgccga gcgcgtgcgc gagcgcttcc tgcggcggaa acagcgacaa
     2401 gagctccgcg gacaacggca cgcgctcgac gtcgatcgtc gcgccgcaac cgctcgcctt
     2461 gcagacgtgg ccgagatcgg ccagcaaccc gtccgaaatg tcgatcgccg ccgtcgcgag
     2521 cggcccgagc gccaagcccg cgccgacgcg cggcaccggc cgctcgaagc gctgcttcaa
     2581 ggcggccgcg gccgagccgg ccggcgccgc cgaccgctcc atgatcagcg cgatgcccgc
     2641 cgagctgtcg ccgagcgtgc ccgtcacgta gacgtcgtcg ccgacgtggc cgccgccgcg
     2701 tgtcagcatg cgcgaccggt cgatgcgacc gatcagctgc agcgtcaacg tcaacggtcc
     2761 gcgcgtgaga tcgccgccga cgaggctcac gccgtagcgt tccgcgagct cgaacaagcc
     2821 gcggctgaac ccttcgagcc agagctcgtc ggccttcggt agagtcagcg caagcgtgca
     2881 ccacttcggc tctgcgccca tcgccgcgag atcgctcaag ttcacggcca tgagccggta
     2941 gccgagcagc tccggagcca tgccatccgg aaaatgcact ccggcgacga gcgtgtccac
     3001 ggtcacggcc gcgagcccgt cgatcgcgag caccgcggca tcgtcgccga cgccgagcac
     3061 gacgtcgggg tcgtggctgt cgcgcgtgaa gtagcgtgcg atgatctcga actcgccgat
     3121 catgccttgc cctgtgcagc cgcgccgcct ccacgcagct cgcgcgaggt cttgtcgaga
     3181 actgcattca cgaacttgta gctatcggtg gcgccgtagc gcttcgcgag ctcgacggcc
     3241 tcgttgatga cgaccttcgt aggcacgtcg ttacgaaatt tgagctcggc caagctcaac
     3301 agcaggatcg cacgccccac ggcgtcgagc tgctcgatgc cgcgggccgc gtgccgcgag
     3361 atcaacgcat cgagagccgc cgagtcgtcg acgacgaccg gcaacagctc cgcgaagaaa
     3421 tcacggtcgc aacgcgcaaa atcgggaagc cccgcaaact gcgcggagat ctccgcaacg
     3481 ccgtgcccgg cgatttgcca ctgatagagc gctttgacga gcagctcccg ggcgagatgg
     3541 cgcgctcgag cgctgcttgc gtgggccaaa acctactgct ccagctggcg cagcacggtg
     3601 gccatttgaa tcgccgcgag cgcggcgtcg gcgcctttgt ttccggcctt cgttccggct
     3661 cgctcgatgg cctgctcgat cgtatcgacc gtcagtatcc cgaagccgat cggaatctcg
     3721 tccgccaagc tcacctgagc gatgccgcgg ctggcttctc cggccacgta gtcgaaatgc
     3781 ggcgtcgcgc cccgtatcac gcagcccaac gcaatcagag cctgataacg ccggctcgag
     3841 gccagcttct tgatcgcgag cggcgtctcg aacgcgcccg gcacgcgcac gacctcgatg
     3901 tcgccggcgg caacgccgtg cttcaacaac gtgccgacgg ccgcgtcgag caaccgatcg
     3961 acgatgaagt cgttgaagcg cgaggcgacg atgccgaagc gcaaaccgcg tgcgttgaag
     4021 tcgccttcga gcgtcttgat ccgatcatcc atgcgtgtct tcccgttccg cggcgtccga
     4081 gacgtagtcg acgacctcga ggccgaagcc ggagagcgca tgcatctgct tgggcgcacc
     4141 gatcacgcgc atgcggcgca cgccgaggac gcggaggatc tgcgcgccga tgccgaacgt
     4201 ccggaaatcc atgctgcgcc cacgccgcgc gccgacttcc ggctccggcg gctgcgacag
     4261 cgattgcacg gaacgcacga gatcgcgggc agactcctcg ggccgcaaaa tcacggccac
     4321 gccatgatcc tgctcggcga tcaaccgcag cgcgtcgcgt aacggccggt gcagcgtcgg
     4381 cgccgtgagc cccagcacgt cgctcaacgt gtcctgccgg tgcacgcgta cgagcgtggg
     4441 agtcttggca tcgagcttgc cgcggacgag cgcgagatgc acggcacgat tcacgtgatc
     4501 ctcgaaacac acgagccgga acgcgccgag ctcggttgcg acgtcgctct cgctgatgac
     4561 ctcgacggat tgctcggtgc gcaggcggta ctcgatgagg tcggcgatcg tgccgatctt
     4621 gaggtcgtgg cgacgcgcga accgcagcag gtcgtcgcgc cgggccatgg caccgtcctc
     4681 gttcagaatt tcgacgatca cggcggccgg ctcgaggccc gcgagtcgca cgaggtcgca
     4741 acccgcttcc gtatgcccgg cgcgcgtcag cacgccaccc ggttgcgcca tcaacgggaa
     4801 gatgtgcccc ggctggcgca ggtcgcgcgg cgcggcattg ggctcgaccg ccgcctgaat
     4861 tgttcgcgca cgatcgtgcg ccgagatgcc ggtcgtcacg ccttcggccg cttcgatcga
     4921 gatcgtgaaa ttcgtggttt gccgaacgtc ggtgtcgcgg accatcaacg gcaagcgcag
     4981 ctgctcgcag cgctcgcgcg tcaacgtgag acagatcagg ccgcggccgt acttcgccat
     5041 gaagttcacg tcttcggcgc gaaccttcgt cgcggccatc acgaggtcgc cctcgttctc
     5101 gcgatcctcg tcgtcgagga tcacgaccat ctcgccggcg cgaatcgcgg cgacgatgtc
     5161 ctcgatcgta tcgaggccga aggcgctatc ggtgctagcg tgcgtagcca tgtttcctca
     5221 gcgttgcgag atcgaggccg ccctccgcgc cggtctgaac gagacgctcg aggtagcggg
     5281 ccattaggtc gacctcaata ttaacagccg tgccggggcg gtactcgcca atcacggtca
     5341 cggcctgcgt atgggggatc acgttgacct cgagctccgt gccgcgaacc gcattcacgg
     5401 tcaagctcac gccgtcgacc gcaacggaac ccttggccgc aatgtagcgc gatagcgcgg
     5461 ccggcacgcc gatcaggagt cgctgcgagc gcccgaccgg cgcgatctcg acgaccttgc
     5521 cgacgccgtc gacgtggccc gtcacgaggt ggccatcgag cggatctccg gctttcaaag
     5581 gaggctcgag attcacgcgc gacccgggac gtagcgcgtc cagagtcgtg acggccagcg
     5641 tctccgccga cacgtccgcg gtaaaatctt ggggcgtcac agccacggcc gtcagacata
     5701 cgccgttgac cgcgatgctg ccgccgaccg cgagcggcgg tatcgcggcc gtaccgagct
     5761 cgatcacgaa ccgtcgatcc gggcctaagt ccgtgcgcgt cgcgacgcgt ccgatgcctt
     5821 tcaccaaccc tgagaacacg cgttgctccg cgacgcctag gcgcccgcca ccctactgac
     5881 gcgagccgtg atccgcaagt cggcgccgac ttgacgtatg tcctcgaaca cgacgttgcg
     5941 gctctcggcc agcgactcga tggccggcag cacgaacatg ccgcgcgcgg catcgccgag
     6001 caaccgcggc gccatataga taatgagttc gtcgatcagc tccgtgtcga gcagcgcgcc
     6061 gttcaagccc gcgcccgcct cgacccacac gtcgttgacc tcgagcgccg cgagccgctc
     6121 gagcacggct tccaaatcgc agtgtgcggc gttgccggcc acggtttcga cgcgcgcacc
     6181 ggccgcacgc agcgcacgtg ccttcggatc gtcgcgatca cgcgtcgtga gcacgatgac
     6241 ctcgcccggc agcgacagcg tcttcgctgt cggcggcgtc ttcagcaccg cgtccacgat
     6301 cacgcgcagt ggctgcttga tgccgagctc cgccgcgatg ccggcctcgt cgcgccgagc
     6361 gtcgagcgac gggtcgtcgt cgacgatcgt gccgctgccc gtgagcaccg cgcccgagag
     6421 tgcgcgccag cggtgaacgt cggccctcgc gctcgcgctc gtgatccatt ggctcgcgcc
     6481 gttcgcgagc gccgtacgcc cgtcgaggct gaccgcgagc ttgctgcgaa cccatggggt
     6541 tccgcgccgc attcgcgcga agaaaccacg attcaacggt tccgcggcgc gttccatgat
     6601 cccgccttcg accgcgatgc ccgcggccgc gagctctttg gcgccgccgc cgtcgacttt
     6661 gggattcgga tcgtgcccgg cgaacacgac gcgcgcgacg ccggcttcga tcagcgctct
     6721 cgtgcacggg cccgtgcggc ccgtgtggca gcatggctct agcgtcacgt acgcggtggc
     6781 cccgcgagcc gctgcaccgg cggcgctgag cgccacgcgc tccgcgtgcg gcccgccggc
     6841 cggcgccgtc cagcccgtgc cgacgacgcg cccgtccttg acgagcacgc agccgaccgt
     6901 cgggttcggc ttggtgtcgt agagaccgtt cgcggcgagc ttgagcgccg cggccatgtg
     6961 ctcgtgatcg atcgcgtcag ccattccgtt cttaccgtcc cggcttcact tcttgcgctg
     7021 ctcgtccggc agcagcgaca tctgctcgcg gctctcgagc aagctcggca gcgactgcaa
     7081 gcgctcgatt tcctgctgaa actccgtgac gtcttggaag ctgcgataca ccgacgcgaa
     7141 ccgcacgtag gcgacctcgt c
//
LOCUS       DATCUD010000241         6323 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73485, whole genome shotgun sequence.
ACCESSION   DATCUD010000241 DATCUD010000000
VERSION     DATCUD010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6323)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6323)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6323
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73485"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1127
                     /locus_tag="VIQ99_03470"
     CDS             <1..1127
                     /locus_tag="VIQ99_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182232.1"
                     /translation="GREPVGAECTDLPTGTARSCVIPADTLSVARAKLGVLEESSIGV
                     ITTYGSPTSVLDNQLAGVDFQYRNSRLPGSRALEGDVFFQQSDTDGLDGDQDAYGVSV
                     RFPSSQGMRGIVQYKRYGVEFNPALGFLDSAGISDTFFNVGYMLRPSGGNLESWLAGL
                     DYQRIDYLNGGGLKTEAYFLRPLTLTNRTNDTMTVAISDFTERLIQPFQIYPGVIVPV
                     GEYDTDSRGIQAGTGGHRKLAVFTRIVEYPDGKFYGGKRSDRFLELTWRPSAFFRGSL
                     SYDYSDVDLPVPNGAFEVRLVRAGFDFAFSPTVSWVNLIQYDNVTEVAGINMRLHWIP
                     EAGREVFFVINHNVEDLDRDNEFHSAFSDMTAKISYTFRF"
     gene            1132..1344
                     /locus_tag="VIQ99_03475"
     CDS             1132..1344
                     /locus_tag="VIQ99_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007151983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182233.1"
                     /translation="MKALDDELPDVRDGLTHEERVVLYVLHETQKERSGRDVPTTMLW
                     GRVCEHFYISPEDLSAMLARLGARNP"
     gene            complement(1425..2546)
                     /locus_tag="VIQ99_03480"
     CDS             complement(1425..2546)
                     /locus_tag="VIQ99_03480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182234.1"
                     /translation="MAIRLLGSLGTLGVLSGAAVLMPHPTASQEQGAAAPPLVITAFG
                     DQAAPTYVTPRTSWGDPDLQGVWSSDDNAGIPMSRPEQFGDRLYLNEQEYAERAERVA
                     RGVEQAENEATSSFRSDFARRAFPQTSLIVDPADGRLPAFTEEGLKRPMPRGTYGNGP
                     LDSYTDFSGYERCITRGIAGSALRVIYGNGTRIVQAPGVVAITYEMIHDTRLIYTDGR
                     PHINQAIRQYLGDSRAHWEGDELVIETTNLTDRTAIGVNGNGNRHSTQMKLTERFKRV
                     ADDVVQYQMTVDDPVTYARPFTMSYPLTPLDGGNLLPYDCHEGNYALALSLGAERAED
                     RALEADRAKGIIRERRPVQGGLGVGGQPAGQGGPGAPPR"
     gene            complement(2633..2851)
                     /locus_tag="VIQ99_03485"
     CDS             complement(2633..2851)
                     /locus_tag="VIQ99_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182235.1"
                     /translation="MDVIYAAEQRTIAELLERHVKENVRPEEIKVTENPSETGSFYIG
                     WRLRQYVLSPAGEIAAARTRLEPTRPRH"
     gene            complement(2946..4556)
                     /locus_tag="VIQ99_03490"
     CDS             complement(2946..4556)
                     /locus_tag="VIQ99_03490"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182236.1"
                     /translation="MRNRILALLLCGVAVQAQAQNAPPNPDALRIRENLCAATAPLQD
                     SVPQRWNGWGAGIQNTRFQPAAAGGLTAADVPRLRLKWAYGLPNEQQPRGQPAVIGGR
                     LFVGSQAGAVYALDAMTGCTIWQFFPRAGSRSALSVGPHRFPNGRNGYAVYFVDAQGH
                     AYAVDADSGEQIWMTRVEDHPMVRGTGAVTLYEDTVFVPITGIGEAMGGANPEYECCT
                     FRGSMTALDAATGAVRWKTHTIPESRRRGTSSAGKPLYGPAGVGIWNAPTVDVQRGVI
                     YSGTGPAYAGDDPVTADAVIAFDMKTGALVWSNQFTKDTWLLNCDGNEASNANCPKSN
                     GPDLDFSASPILTKNSAGRDVIVIPQKSGMVYALDPAERGKTLWSYRAGPGSPVGGVW
                     GAAVEGDRMYVAVGGYRNEETGGIHAIDIDTGQRIWYTPPSELLCSPPGAACSKTQAA
                     AVTAIPGAVFSGSADGGLRAYDARDGKIIWTFDANREFTTVNGVPGRGASFSGSGPVV
                     VGGMLYVLSGDAGFVGRPGNVLLAFAAE"
     gene            complement(4576..5967)
                     /locus_tag="VIQ99_03495"
     CDS             complement(4576..5967)
                     /locus_tag="VIQ99_03495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182237.1"
                     /translation="MKSKPNRSWLVAAALLITGPTFAQDMPDIGFRSVGRGRPLAASV
                     HDQKEVGPGWVGGPFVAQGAQLDGFRPDALPASIEPLPVDLFTSTDFYADKELWTDPR
                     YFRCNSPMATEFQRGILTPNPLVTTGKTEDGPWGHCEIDYPREAIVSPYAFKTAQEHY
                     EALLAETRGRGGPSVYNFGNFPAVDWNGVYERPVAGPRNQQTWYWGAHSQITTILSLL
                     TPTYQQRTVQEAYHQVRGNAIWPSTFCWPEGFMRRYYPFSVWEHYVIATPDLVQIMAG
                     VARNFITNVHVGREFNMEDVANGGVPRLGAAVPRWYGETIGFWDGDVLITWTSNVQAW
                     KSHSSFEWSGQLQSIEIYTPIRGDGGAFVGLNHESIIYDSEALVEPIRIVRNLHKINN
                     YTDANEVPYVFIECVPTIYSVEGHNAPVTPGTVIEYEIPDMYGRPWDQIWQKYFEQGM
                     TRPSEEEGLFNFE"
     gene            complement(6082..>6323)
                     /locus_tag="VIQ99_03500"
     CDS             complement(6082..>6323)
                     /locus_tag="VIQ99_03500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019072594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182238.1"
                     /translation="AEGEAQLASLSPREREILQRMAQGSTNIEIGRQIFISEKTVRNH
                     VTRIFEKLGVHSRAQAIVLALKHGLQPGSGGKDRQ"
BASE COUNT         1024 a         2125 c         2028 g         1146 t
ORIGIN      
        1 ccggccggga gccggtcggc gccgagtgca cggacctgcc gacgggcacc gcacgctcct
       61 gcgtgattcc tgccgacacg ttgtccgtcg ctcgcgccaa gctcggcgtg ctcgaggagt
      121 cgagcatcgg cgtcatcacg acgtacggca gcccgacgtc ggtgctcgac aaccagctcg
      181 ccggcgtcga cttccagtat cgcaactcac gcctgccggg cagccgcgcg ctcgaaggcg
      241 acgtgttctt ccagcagagc gacacggacg gcctcgacgg cgaccaggat gcttacggcg
      301 tcagcgtgcg cttcccgagc tcgcaaggca tgcgcggcat cgtgcaatac aaacgctacg
      361 gcgttgagtt caatccggcg ctaggcttcc tcgacagcgc cggcatcagc gatacgttct
      421 tcaacgtcgg ctacatgctg cggccgagcg gcggcaatct cgagtcttgg ctcgcgggac
      481 tcgactacca gcgcatcgat tacctgaacg gcggcgggct caagaccgag gcgtacttcc
      541 tacggccgct cacgttgacg aatcgaacca atgacacgat gacggtcgcg atcagcgact
      601 tcacggagcg gctcatccaa ccgttccaga tctaccccgg cgtgatcgtg cccgtcggcg
      661 agtacgacac cgacagccgc ggcatccaag ccgggacggg cggccaccgc aagctcgcgg
      721 ttttcacgcg catcgtcgaa taccccgacg gcaagttcta cggcggcaaa cgctccgatc
      781 ggttcctgga gctgacctgg cgtccttcgg cgttttttcg cggcagcctg agctacgact
      841 acagcgacgt cgatctgccg gtgccaaacg gcgcgttcga ggtgcggctc gtgcgcgctg
      901 gcttcgactt cgcgttctcg ccgacggtgt cctgggtcaa tctgattcaa tacgacaacg
      961 ttaccgaggt cgccggcatc aacatgcgcc tgcactggat tcccgaggcc ggccgcgagg
     1021 tgttcttcgt catcaaccac aacgtcgagg atctcgaccg cgacaacgag tttcactcgg
     1081 cgttctcgga catgacggcg aagatcagct acacgttccg tttctaatgc gatgaaagcg
     1141 ctcgacgacg agctgcccga cgtccgcgac ggactcacgc acgaggagcg cgtcgtcttg
     1201 tatgtcttgc acgagacgca gaaagaacga agcgggcgtg acgtgccgac gacaatgctc
     1261 tggggccgcg tctgcgagca cttctatatc agccctgagg atttgtcggc gatgctcgcg
     1321 cgcctcggcg cgcgcaaccc ttaggttgac tccggcgcat tgagctcctc cgcgctcccg
     1381 tcgctgcgcg agagtgcgtt cgattcgagg acggcgttgg gccgctatcg cggtggcgct
     1441 cccgggccgc cttggcccgc cggctggccg ccgacaccca gcccaccctg cacgggccgg
     1501 cgctcacgga tgatcccctt cgccctatcc gcctcgagcg cgcgatcctc ggcacgctcc
     1561 gctccgagcg acagggcgag cgcgtagttc ccctcgtggc agtcataggg cagaaggttc
     1621 cctccgtcga gcggcgtcag cgggtaggac atcgtgaacg gccgcgcgta ggtgacggga
     1681 tcgtccacgg tcatctggta ctgcaccacg tcgtcggcca cgcgcttgaa gcgttcggtg
     1741 agcttcatct gcgtgctgtg acgattaccg ttgccgttga cgccgatggc ggtccggtcc
     1801 gtgagattcg tggtctcgat cacgagctcg tcgccttccc aatgtgcccg cgagtcgccg
     1861 agatactggc gtatcgcttg attgatgtgc ggccggccgt ccgtgtagat gaggcgagtg
     1921 tcgtggatca tctcgtacgt gatcgccacc acgccgggcg cttgcacgat gcgcgtgccg
     1981 ttgccgtaga tcacgcgcaa cgccgagcct gcgataccgc gcgtgatgca gcgctcgtaa
     2041 cccgagaagt cggtgtagct gtcgagcggc ccgttgccgt acgtgccgcg cggcatgggt
     2101 cgcttcaggc cttcttccgt gaatgccggc aaccgaccgt cagccgggtc gacgatcaac
     2161 gacgtctgcg gaaacgcgcg gcgcgcaaag tcggagcgga agctgctcgt cgcttcgttc
     2221 tccgcctgct cgacgccgcg tgccactcgt tcggcgcgct ctgcgtattc ctgctcgttc
     2281 aagtacagcc ggtcgccgaa ctgctccggc cgcgacatcg gaataccggc gttgtcgtcg
     2341 ctggaccaga ccccctgaag gtcagggtcg ccccatgacg tgcggggcgt aacgtacgta
     2401 ggcgcggctt ggtcgccaaa ggcggtgatc acgagcggcg gagcggcggc accctgctcc
     2461 tgacttgcgg tcggatgcgg catcagaacg gccgcgccgc tgagcactcc gagagtgccg
     2521 agggaaccga gcagtcgaat tgccatcgcg ggggctcctg gtcggtgtgt cgttcgttcg
     2581 gaatgatagg cccaagaggt tgtcggttcg agatgggtgt ggtcggcgcg agctaatggc
     2641 gcggccgcgt gggctcgaga cgcgtgcgcg ccgcagcgat ctcgccggca ggtgagagca
     2701 cgtactggcg tagacgccag ccgatgtaga agctgcccgt ctcgctcggg ttttcggtca
     2761 ctttgatttc ctcgggcctc acgttctctt tcacgtgccg ctccagaagc tccgcgatgg
     2821 ttcgctgttc ggctgcgtag atgacgtcca tgtgctcctc caaatcctgg tgagctcggg
     2881 cgcagtttgg gcggccgcgg cttaacgatc gctgaacacg agggtcggcg cctggacgta
     2941 gagccctact ccgccgcgaa cgcgagcagc acgttgccgg gacggccgac gaagcccgcg
     3001 tcgccggaca gcacgtacag catcccgccg acgacgacgg ggcccgatcc gctgaacgag
     3061 gcgccgcggc ccggcacgcc gttcacggtc gtgaactcgc ggttcgcgtc gaacgtccag
     3121 atgattttgc cgtcacgcgc gtcgtacgca cgcaggccgc cgtcggcgga gcccgagaac
     3181 acggcgcccg gaatcgcggt cacggcggct gcttgagtct tgctgcacgc ggcgccgggc
     3241 ggcgagcaca acaactcgct cggcggcgtg taccagatgc gttggccggt atcgatgtcg
     3301 atcgcgtgaa tgccgccggt ctcctcgttg cgataaccgc cgaccgcgac gtacatgcgg
     3361 tcgccctcga ctgcggcgcc ccagacgcca ccgaccgggc tacccgggcc cgcgcgatag
     3421 ctccacagag tttttccgcg ctcggccggg tcgagcgcgt agaccatgcc cgatttctgc
     3481 gggatcacga tcacgtcgcg gcccgcagaa ttcttcgtca ggatcggcga cgccgagaag
     3541 tcgagatcag ggccgttcga cttcgggcaa ttcgcgttgc tggcctcgtt gccgtcgcag
     3601 ttcaagagcc acgtgtcctt cgtgaactga ttgctccaga cgagcgcgcc ggtcttcata
     3661 tcgaacgcga tcacggcatc ggcggtcacg ggatcgtcgc cggcgtaggc cgggcccgtg
     3721 ccggaataga tcacgccgcg ctgcacgtcg acggtcggcg cattccagat gccaacgccg
     3781 gccgggccgt acagcggctt acccgcgcta ctcgtgccgc gccgccgcga ctcggggatc
     3841 gtgtgcgttt tccagcgcac cgcgccggtc gcggcgtcga gcgccgtcat gctgccgcgg
     3901 aacgtgcagc actcgtactc gggattagcg ccgcccatcg cttcgccgat gccggtgatc
     3961 ggcacgaaca ccgtgtcttc gtacagcgtc acggcgccgg tgccgcgcac catcggatga
     4021 tcctcgacgc gcgtcatcca gatttgctcg ccgctgtcgg catcgaccgc gtacgcgtgg
     4081 ccctgcgcgt cgacgaaata caccgcgtag ccgttacggc cgttcgggaa tcgatgcggg
     4141 cccaccgaca acgcgctgcg cgagcccgcg cgcggaaaga actgccagat cgtgcagccg
     4201 gtcatcgcgt cgagcgcgta cacggctccg gcctgcgagc cgacgaacaa gcggccgccg
     4261 atcacggccg gttggccgcg cggctgctgc tcgttcggta ggccatacgc ccacttcaat
     4321 cgcaggcgcg gcacgtcggc cgccgtgaga ccgccagctg cggcgggctg gaaccgcgtg
     4381 ttctgaatcc cggcgcccca gccgttccag cgctgcggca ccgaatcttg gagcggtgcc
     4441 gtcgcggcac acaggttctc gcggatccgc agcgcatccg ggttcggcgg cgcgttctgc
     4501 gcctgcgcct gaaccgccac gccacacagc aacaacgcca agattcggtt tctcatcgtt
     4561 cgttcctcga aagtcctact cgaagttgaa caagccctct tcctccgagg gcctggtcat
     4621 gccttgctcg aagtacttct gccagatctg atcccacggg cgcccgtaca tgtccggaat
     4681 ctcgtactcg atgaccgttc ccggcgtcac gggcgcgttg tgcccttcga ccgaataaat
     4741 cgtcggcacg cactcgatga acacgtacgg gacttcgttc gcgtcggtgt agttgttgat
     4801 cttgtgcagg ttgcgcacga tccggatcgg ttccacgagc gcctcggagt catagatgat
     4861 cgactcgtgg ttcaggccga cgaacgcgcc gccatcgccg cggatcggtg tgtagatctc
     4921 gatcgactga agttggccag accactcgaa cgaggaatgt gacttccacg cctgtacatt
     4981 gctggtccac gtgatcagca cgtcgccgtc ccagaaaccg atcgtctcgc cgtaccagcg
     5041 cggcaccgca gcgcccaagc gcggcacacc gccgttcgcg acgtcctcca tgttgaactc
     5101 gcgaccgacg tgcacgttcg tgatgaagtt acgcgcgacg cccgccatga tctgcacgag
     5161 gtccggcgtc gcgatcacat agtgctccca gaccgagaac gggtagtagc gccgcatgaa
     5221 gccctcgggc cagcaaaacg tcgacggcca gatcgcgttg ccgcggacct ggtgatacgc
     5281 ctcctggacc gtgcgctgct gatacgtcgg cgtcagcagc gacaggatcg tcgtgatctg
     5341 gctgtgcgcg ccccagtacc aggtctgctg gttgcgcggg cccgcgaccg ggcgctcgta
     5401 cacaccgttc cagtcgactg ccggaaaatt gccgaagtta tagacgctcg gaccgccgcg
     5461 gccacgtgtc tccgcgagca acgcctcata gtgctcctgc gcggtcttga acgcgtacgg
     5521 gctcacgatc gcctcgcgcg gatagtcgat ctcgcaatga ccccacgggc cgtcttcggt
     5581 cttgcccgtc gtcacgagcg gattcggagt cagaatgccg cgctggaact cggtcgccat
     5641 cgggctgttg cagcggaagt aacgcgggtc ggtccacagc tccttgtcgg cgtagaagtc
     5701 cgtgctcgtg aagaggtcga ccggcagtgg ctcgatgctc gcgggcaaag cgtcggggcg
     5761 gaagccgtcg agctgcgcgc cctgcgccac gaacggaccg ccgacccagc cagggccgac
     5821 ctccttctga tcgtgcacgc tcgcggccaa aggccggccg cggccgacac ttcgaaagcc
     5881 gatatccggc atgtcctgcg cgaaggtcgg ccccgtgatc aggagggccg cggccaccag
     5941 ccacgatcga ttcggtttgc ttttcatggg gatctatctc gtcttggagt cagtcgcgga
     6001 cgtggcctcg agtctaaagc ccggccagtc tttttcggtg tcgggcacgt taacagacgt
     6061 taaggttttc ccaaacctta gctactgccg gtccttgccg ccgctgcccg gctgcaaccc
     6121 gtgcttcagc gcgagcacga tcgcctgcgc gcgcgagtgg acgccgagct tctcgaaaat
     6181 ccgcgtcacg tgattgcgca ccgttttctc gctgatgaag atctggcggc cgatctcgat
     6241 gttcgtggag ccctgcgcca tccgctgcaa gatctcgcgc tcgcgcgggg acaggctcgc
     6301 gagctgcgcc tcgccttcgg cgg
//
LOCUS       DATCUD010000242         2936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_16700, whole genome shotgun sequence.
ACCESSION   DATCUD010000242 DATCUD010000000
VERSION     DATCUD010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16700"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..420)
                     /locus_tag="VIQ99_03505"
     CDS             complement(190..420)
                     /locus_tag="VIQ99_03505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182239.1"
                     /translation="MDTTVGTFRELTAMEIAVVSGAFSWGELAGHMLLGAGLGAMAGA
                     AGGGLGAGPGALAGALLGGINYTVGDLIDTYF"
     gene            complement(548..2674)
                     /locus_tag="VIQ99_03510"
     CDS             complement(548..2674)
                     /locus_tag="VIQ99_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014007449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEY9182240.1"
                     /translation="MGPFNRLDFGWRRRVPMLYQTEAPECGIACLAMIASFHGHHVDV
                     AALRREFSVSMHGATLAALIDFAHRLELETRAVRLDLPDLRRLRLPCVLHWNFTHFVV
                     LTRVGRRAIAIHDPSRGERSVPLAEVTQAFTGVALELWPTPRFERQRPEAPVSVRKLV
                     GPVSGLARSLALVVALTATLETFSIVSPLLLQWVVDHALVTASGDLLTVLALGFGLLV
                     LLEQATAAIRALVIMRFGTTLNVQWHANVFSHLQRLPLPYFEKRHLGDIVSRFRSIDA
                     IQRTITTAFVEAIVDGAMTIVLLAVMLVYSPALSAICLVAAALYVATRALTHRPLRGA
                     RYEQIAAGAKQESHFIESVRGLRAIKSFRRGEERRSAWLSLLIEQVNAGLRADRLQLL
                     LRSTSGLLFGLENVLVVYAGASLVLELELSTGMLLAFLAYKRQFTSRVSALVDKAFEM
                     RLLRLHGERLADVVLAPPEERPLVGRLLGASAGSLAPTLEMRGLRFRYAEHEPYVLDG
                     LDLNVAAGESVAIVGPSGCGKSTLLNIVLGTLTPTGGDVLIGGVPLAQLGHDLLRRTV
                     ASVVQNDCLFAGTIGENISFFDTQADRAWIEECAQLAAIHAEIAALPMAYSTLVGFMG
                     STLSAGQHQRILLARALYARPSILILDEATSHLDVQREAAVCAALRKLAITRIVVAHR
                     PQTAAAADRIVALHLGRLVNVANRPG"
BASE COUNT          528 a         1017 c          959 g          432 t
ORIGIN      
        1 gaggccgatc gcgatgccgg atgcgaatcg gttcgcgagc ggcagaccct ccgtcacctt
       61 ccaggccaac gccgcgaaca tccccggcac ggccaacgaa gcccagcgaa gccacgcgtc
      121 gttcgatttc atcgagcccg cctctcccgg aaaacgtggt gacgccgagt tggcgccacc
      181 acgcgaccct cagaagtacg tgtcgatcag atccccgacg gtgtaattga tgccgccgag
      241 caacgctcca gccagcgcac cgggacctgc gccgaggcct ccgcccgcag caccggccat
      301 cgcgccgagg ccggcgccga gcagcatgtg cccggccagc tcgccccacg agaaggcgcc
      361 actcacgacc gcgatctcca tcgccgtcag ctctcgaaac gttccgactg tcgtatccat
      421 gtcgtttcct ccttgattgc cacggatcca catttcaccc gcttcgctcc gaaggggttc
      481 ggtgcattga agcgcgatcg gcacgcgcga gcaccgcgag aaactggccg gttcgtgcgg
      541 atatcgttca accagggcgg ttcgcaacgt tcacgagcct gcccaagtgc agcgctacga
      601 tcctgtccgc tgccgcggcg gtctgcggcc gatgcgcgac gacgatccgc gtgatcgcga
      661 gcttgcgcag agccgcgcac acggccgcct cgcgctgaac gtcgagatgg ctcgtcgcct
      721 cgtccaggat cagtatcgaa gggcgcgcgt acagtgcgcg cgcgagcagt atccgctggt
      781 gctggcccgc cgagagcgtc gagcccatga agccgaccag ggtgctgtag gccatcggca
      841 gcgcggcgat ctcggcgtgg atcgccgcga gctgcgcgca ttcctcgatc cacgctcgat
      901 cggcctgcgt atcgaagaag ctgatgttct cgccgatcgt gccggcgaat aggcaatcgt
      961 tctgcacgac gctggccacc gtgcgccgca gcaaatcgtg accgagctgc gcgagcggca
     1021 cgccgccgat cagcacgtcg ccgccggtcg gcgtcagcgt gccgagcacg atgttcaaga
     1081 gcgtgctctt gccgcagccg gagggcccca cgatagcgac cgactcgccg gccgcgacgt
     1141 tgagatcgag gccgtcgagc acgtacggct cgtgctccgc ataccgaaag cgtaagccgc
     1201 gcatctcgag ggtcggagcc aacgaaccgg cggaagctcc caacaggcgg cccaccaacg
     1261 gccgttcctc gggtggagcc agcaccacgt cggcgagcct ctcgccgtgc agtcgcaaca
     1321 ggcgcatctc gaacgccttg tcgacgagcg cgctcacacg cgacgtgaac tgccgcttgt
     1381 acgccaagaa cgccagcaac atccccgtcg atagctcgag ctcgagcacg aggctcgcgc
     1441 cggcatagac cacgagcacg ttctcgagac cgaacagcag gccgctcgtc gagcggagca
     1501 agagctgtag gcggtcggcg cgcagccccg cattgacctg ctcgatcagg agggacagcc
     1561 aagccgagcg ccgctcctcg ccgcgccgga acgacttgat cgcgcgcagc ccgcgtacgg
     1621 actcgatgaa atgactctct tgcttggcgc cggccgcgat ctgctcgtag cgggcgccgc
     1681 gtaacggtcg gtgagtcagt gcgcgcgtcg cgacgtagag cgcagccgct acgaggcaga
     1741 tcgcgctcaa agcagggctg tacacgagca tcaccgcgag cagcacgatc gtcatcgccc
     1801 catcgacgat cgcctcgacg aacgccgtcg tgatcgtccg ttggatcgcg tcgatggagc
     1861 ggaaccgcga cacgatgtcc ccgagatgcc gcttctcgaa gtagggcagc ggtagccgct
     1921 gcaaatgcga gaacacgttc gcgtgccatt gcacgttcag cgtggttcca aagcgcatga
     1981 tcacgagcgc acggatcgcc gccgtggctt gctcgagtag cacgagaagg ccgaagccca
     2041 gtgccagcac ggtcaggagg tcgccgctcg cagtcacgag cgcgtggtcg acgacccact
     2101 gcaacagcag cgggcttacg atcgagaacg tctcgagcgt cgccgtcagc gcgacgacga
     2161 gcgccaagga gcgcgcgagc cccgagaccg ggccgacgag cttgcgcacg gagaccggcg
     2221 cctcggggcg ttgccgctcg aagcgcggcg tcggccaaag ctcgagcgcg actcccgtga
     2281 acgcctgtgt gacctccgcg agtggcaccg accgctcgcc gcggctcgga tcgtggatcg
     2341 cgatcgcccg ccggccgacg cgtgtcagca ccacgaagtg cgtgaagttc cagtgcaaca
     2401 cgcaaggcag ccgcaggcgg cgcaggtccg gaaggtccag gcgtaccgcg cgcgtctcga
     2461 gctcgagccg gtgcgcgaag tcgatcaacg cggccagtgt cgcgccgtgc atcgacacgg
     2521 agaactcgcg gcgcagcgcc gcgacgtcga cgtggtggcc atgaaaggac gcgatcatcg
     2581 cgaggcacgc gatgccgcac tccggcgcct cggtctgata cagcatcgga acccggcggc
     2641 gccaaccgaa gtcgagacga ttgaacggcc ccatcgcgct ccgcgtactt tcacttccct
     2701 gttcgtgaag cggcagtaca gcagtcgcgt ggttcagaca cagccggaat ttccggcgtt
     2761 gttcggcgga aatgcgccgg gtgccggcgt gcgctgcgcc gctacgattg cctgatgggt
     2821 tcgatgtcat cgctgttccg tgccgaggcg gtcgccgcgc aaacgcacga cggtttcggc
     2881 acaatcgtgc tcgaatgccc ggtcgcgctc gcgtcgctgg gcgccgtatg cgccgg
//
LOCUS       DATCUD010000243         9531 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101825, whole genome shotgun sequence.
ACCESSION   DATCUD010000243 DATCUD010000000
VERSION     DATCUD010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 9531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9531
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101825"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            120..470
                     /locus_tag="VIQ99_03515"
     CDS             120..470
                     /locus_tag="VIQ99_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007192870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182241.1"
                     /translation="MAEGLIANLEALLAKGGDSATLRLALASRYLDAGDTAPAVKHAE
                     AAVRLDPEYSAAWKALGRALAAAGRVAEAQASYARGIEVAERRGDQQAAKEMRVFAKR
                     LQRAASGAAPRDDD"
     gene            complement(475..789)
                     /locus_tag="VIQ99_03520"
     CDS             complement(475..789)
                     /locus_tag="VIQ99_03520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182242.1"
                     /translation="MLSWLIGVVIFVLLLGALWKSSPRAALGAVLGFVIALCLYWLFS
                     TQLTGYVTGMSEIPVWLPPLPIALVVIALFYFGIKTWLNADNLPPPRQRETDDQHGQG
                     HH"
     gene            complement(822..1169)
                     /locus_tag="VIQ99_03525"
     CDS             complement(822..1169)
                     /locus_tag="VIQ99_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007977898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HEY9182243.1"
                     /translation="MATAEGQQHPLSIYFWIWGLLFVFSAASYATDFLPHGYVRWALI
                     LTFMLLKAGFIVAIFMHMKWERLALIWAILGPPIVLLVLIGLMAVEGDYTEVTRLDFF
                     SEPIVPAGHGAEH"
     gene            complement(1180..1863)
                     /locus_tag="VIQ99_03530"
     CDS             complement(1180..1863)
                     /locus_tag="VIQ99_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006578692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III family protein"
                     /protein_id="HEY9182244.1"
                     /translation="MAHTGTTEAAANEAGWQAIVTDWSADKQTFQVPWGKAMMWIFLL
                     SDTFIFTCFLTGYMNVRMSTPVPWPNPSEVFALEVFGVSVPLLLIGIMTFDLITSSGT
                     MALAVNYGYRRDRGRAAALMFITAAIGAIFVGMQAFEWTKLIVEEGIRPWGNPMGASQ
                     FGATFFMITGFHGLHVSAGVVYLTIVAMKVLRGDYEKKGYEIVEIVGLYWHFVDLVWV
                     FIFAFFYLW"
     gene            complement(1887..2573)
                     /locus_tag="VIQ99_03535"
     CDS             complement(1887..2573)
                     /locus_tag="VIQ99_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007435197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III"
                     /protein_id="HEY9182245.1"
                     /translation="MLSALLIAMLTAITVWWLLIQRLKDKPWTKQGVVPTSQETVTSS
                     APKVGLWVFLAVVSSLFGLFASAYTMRMTGHGGLAAWDQLDEPNLLWINTLILVLASG
                     AMQVARNRIDKDDFAGGRGYFLASGVMTIAFLVGQVLAWQQASASGALGPQSPAFSFF
                     VLLTAVHGLHLIGGLWVLARTTTRIFRGVDATGVVARGRLRMSVELCTTYWHWLLLIW
                     LGLFALLLST"
     gene            complement(2589..4334)
                     /locus_tag="VIQ99_03540"
     CDS             complement(2589..4334)
                     /locus_tag="VIQ99_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007229324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY9182246.1"
                     /translation="MAYVAIADRDHHLHDPQTFIEKYIWSQDHKVIAIQYGSVAIGVG
                     LVALVLSLLMRLQIGFPETFSFITPYNYYQFVTMHGMIMVIYLLTALFLGGFGNYLIP
                     LMCGARDMVFPYMNMLSFWVYLLSVIVLLASFFVSGGPTGGGWTLYPPQTVTEGTPGH
                     DWGILLMLLSLAIFIVAFTMGGLNYVTTVLQARCRGMTLMRMPLSVWGIFVATILGLL
                     AFPALLVAAIMMILDRTIGTSFFMPALMSLGELGETDGGSPILFQHLFWFFGHPEVYI
                     VALPAFGIVSDLLSTHARKNIFGYRMMVWAIVAIGALSFIVWAHHMYVSGMNPYFGFF
                     FATTTLIIAIPTAIKVYNWVLTLWRGNLQFNVPNLFATGFIFTFVHGGLTGLFLGNVT
                     VDLPLSDTYFVIGHFHMVMGVSPVMVLFGAIYHWFPKMTGKMPNEPLGRLHFWMTFLG
                     TYAIYLPMHYIGILGMPRRYYAYGTTDFIPDSAHAVNQAITLAAIVVAVAQLVFLVNV
                     FYSLRKGKQAPDNPWGATTLEWQTPNTPPVHGNWGPKLPVVYRWAYDYSVPGEPKDFI
                     PQNEPPKGHHSLGHG"
     gene            complement(4371..5729)
                     /locus_tag="VIQ99_03545"
     CDS             complement(4371..5729)
                     /locus_tag="VIQ99_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008220568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9182247.1"
                     /translation="MVALAVVIVLLVIGSLIFHFASPWYFTPLASNWSTIDFTVDVTF
                     WVCGIVFVAVNLFTAYCIWKFRARAGNTAHYEPESTKLEVILTIFTTVGVAAMLTPGL
                     FVWADFVQVPDDAADVEAVGKQWHWSFRLPGRDNELGASDVRHLSVDNPLGVDPADPA
                     GQDDIIVAGPILHLPVGQPVRTLLRSTDVLHNFTVPQFRVKMDLVPGLVTYQWFTPTV
                     PGTYEILCEELCGTGHFAMRGKVVVDEPAAYQAWLANQPTFAQTQARPVGNATAGSAN
                     YAVCSACHGAQGEGNQQLNAPKLAGLDSWYIRRQLIAYQTQMRGTAMGDQFGPQMAPM
                     ANVVADPATRENVIAHIATLPSNPPPATVIGDADRGRALFTTCATCHGPQGQGRWGTN
                     APRLAGMSDWYLERQLTYFKEGVRGSHPDDIYGDQMGLLAGVLVGENAIRDVVAYINT
                     LR"
     gene            complement(5827..6273)
                     /gene="azu"
                     /locus_tag="VIQ99_03550"
     CDS             complement(5827..6273)
                     /gene="azu"
                     /locus_tag="VIQ99_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008483242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEY9182248.1"
                     /translation="MRRTFWVIALGGVLLSGQAWSQECSLTIEGNDQIQFNKKELRVS
                     KSCKEVTVTLKHVGQLAANVMGHNWVLTATGDYQAVATAGQAAGAPNFVPAGDARVLA
                     ASSVIGGGQETSVKFDLSKLTAGGDYTYFCSFPGHFVLMNGKLIVE"
     gene            6667..7125
                     /gene="dtd"
                     /locus_tag="VIQ99_03555"
     CDS             6667..7125
                     /gene="dtd"
                     /locus_tag="VIQ99_03555"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008334709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HEY9182249.1"
                     /translation="MIGLIQRVSGAKVEVDGEIIAEIGVGVLVLVGIERGDGPDEATK
                     LASRLAAYRIFADDAGKMNRSVREVGGSLLLVPQFTLAADTSGGLRPSFSRAAPPEHG
                     QAMFDALVAAVAATGVAHAHGRFGADMKVTLTNDGPVTFWLQVSPPSPIG"
     gene            7175..7417
                     /gene="tatA"
                     /locus_tag="VIQ99_03560"
     CDS             7175..7417
                     /gene="tatA"
                     /locus_tag="VIQ99_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015280759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEY9182250.1"
                     /translation="MGLGGISIWQLAIVLLIVVLIFGTKRLKSIGSDLGAAVKGFKGA
                     MDSDEKKPSEEAQKRVESDEPDAEFPEQKKDKSRSS"
     gene            7433..7870
                     /gene="tatB"
                     /locus_tag="VIQ99_03565"
     CDS             7433..7870
                     /gene="tatB"
                     /locus_tag="VIQ99_03565"
                     /inference="COORDINATES: protein motif:HMM:TIGR01410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEY9182251.1"
                     /translation="MFDVGFPELVLVAVIGLLVLGPQRLPKVAAEIGKWVSRARRTAT
                     QLRRQLEREIELSDIEPPPPRPPPRPAAPPPSAPRERDVPDGPGAHADSPDTAAAVPA
                     PPVSDAEPKDSGQPTAGEPVGGKAPSDAPAQSPGVEPVDRPPV"
     gene            7871..8650
                     /gene="tatC"
                     /locus_tag="VIQ99_03570"
     CDS             7871..8650
                     /gene="tatC"
                     /locus_tag="VIQ99_03570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003212252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY9182252.1"
                     /translation="MSTPPDKHEPEEQLAEGTLMSHLLELRSRIMKAVLAVIVVFLCL
                     MPFINDVFEIVSKPLREALPEGSEMIVTDVAAPFLTPFKTTFFVALFIAMPVVLFQVW
                     QFVAPGLYKREKRFAIPLMVSSVVLFYTGIAFAYFIVFRVMFGFFASVTPSGVEMTPD
                     ISAYLSFVLGIFLAFGLAFEVPIATVMLIWSGLVSAKALKGARPYVFLGAFIVGMVLT
                     PPDVFSQTLLAIPMYLLYEGGLLMARLLIPEKVGVEKHSEA"
     gene            8675..>9531
                     /locus_tag="VIQ99_03575"
     CDS             8675..>9531
                     /locus_tag="VIQ99_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012074565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine aminotransferase"
                     /protein_id="HEY9182253.1"
                     /translation="MKPIESKLPSVGTTIFTLMSQLAAQHGAVNLSQGFPDFSPPPLL
                     LDIVERCLRGRYHQYALMPGSLALRAAIAVKLVSLYGVTTDPGTEITVTSGATEAIFD
                     AIQAVVRRDDEVIVLDPCYDSYEPSITLAGGRAVHVPLTLPDFAIDWERLAAALSDRT
                     RLVIVNSPHNPSGALLGAADWDRLAALLRPYDCYLLSDEVYEHVVFDGKRHATALAQP
                     ELKSRCFAVFSFGKTYHATGWKLGYCIAPPELSAELRRVHQYVTFASTSPLQQALAEY
                     MTAHPEHHLG"
BASE COUNT         1819 a         2976 c         3061 g         1675 t
ORIGIN      
        1 aacgcggatc gcattcacta caccgtcgtc gagcgcgtcg gacacgtgaa tccgcgcgcg
       61 ggctgccggc tcgagaccga aacgagcgag cagatcgaga tcgagtagga gcgctccgcg
      121 tggcagaggg gctgattgcg aatctcgagg cattgctcgc caagggcggc gacagcgcga
      181 cgctacgcct cgcgttggcg tcacgctatc tcgacgccgg cgacacggcg ccggccgtca
      241 agcacgccga ggcggccgtg cggctcgacc ccgaatactc ggcggcctgg aaagcgctgg
      301 gccgcgcgct cgcggcggcc gggcgtgtgg ccgaggcgca ggcaagctac gcgcgcggaa
      361 tcgaagtggc cgagcggcgc ggggatcaac aagccgctaa ggaaatgcgc gtgttcgcga
      421 aacgcctaca acgtgccgcg agcggtgccg cgccgcgcga cgacgactga cagatcagtg
      481 atgaccctga ccgtgctggt cgtcggtctc tcgctgccgc ggaggcggta agttgtcggc
      541 attgagccac gtcttgatgc cgaagtagaa cagcgcgatc acgacgagcg cgatcggcaa
      601 tggtggaagc caaacgggta tctcgctcat tcctgtgacg taccctgtga gttgcgtgga
      661 aaaaagccag taaaggcaca acgcgatcac gaagccgagc acggcgccca aagccgcccg
      721 cgggctcgac ttccagagcg cccccaagag cagcacgaag atcacgacgc cgatcagcca
      781 ggacaacatc gcgaagtacc ttgtgcctcg ttcgccgctc gtcagtgctc ggcgccgtgc
      841 ccggccggga cgatcggttc cgagaagaag tcgagccgcg tgacttccgt atagtcgcct
      901 tcgacggcca tcaggccgat cagcacgagc agcacgatcg gcggtcccaa gatcgcccag
      961 atcagcgcga gccgctccca tttcatgtgc atgaagatcg cgacgatgaa gcccgccttc
     1021 agcagcatga acgtcaggat caacgcccag cggacgtagc cgtgcggtag gaagtccgtg
     1081 gcgtacgacg ccgcgctgaa cacgaacaac agaccccaga tccagaaata gatgctgagc
     1141 ggatgctgtt gaccttctgc agttgccatt gcgatgtccc taccagagat agaagaacgc
     1201 gaagatgaag acccagacca agtcgacgaa gtgccagtag aggcccacga tctcgacgat
     1261 ctcgtagccc ttcttttcgt agtcgccgcg cagcaccttc atcgccacga tcgtgaggta
     1321 cacgacaccg gccgacacgt gtaggccgtg gaagcccgtg atcatgaaga acgtcgcacc
     1381 gaactgcgac gcgcccatgg gatttcccca gggtcgaatg ccttcctcga cgatcagctt
     1441 cgtccactcg aacgcctgca tgccgacgaa aatcgcgccg atcgcggccg tgatgaacat
     1501 caacgcggcg gcgcggccgc ggtcgcggcg atagccgtag ttcacggcga gcgccatcgt
     1561 gccgctgctc gtgatcaggt cgaacgtcat gatgccgatc aagagcagcg ggacgctgac
     1621 gccgaagacc tcgagggcga acacctcgct cggattcggc cacggcacgg gcgtcgacat
     1681 gcgcacgttc atgtatccgg tcaggaagca cgtgaagatg aacgtgtccg agagcaggaa
     1741 gatccacatc atcgctttgc cccagggaac ctggaacgtc tgcttgtctg cggaccagtc
     1801 cgtgacgatg gcttgccagc cggcctcgtt tgcggcggct tcagtcgtac ccgtatgcgc
     1861 cataacttaa ggagttcctc gaaggattaa gtcgacaaca gcaacgcgaa aaggccgagc
     1921 cagatcaaca agagccaatg ccaatacgtc gtgcacagct ctacgctcat gcgaagccgg
     1981 ccacgagcaa cgacgccggt cgcatcgacg ccgcggaaga tccgcgtggt cgttcgggcg
     2041 agcacccaga gcccgcctat caagtgcaag ccgtgcacgg ccgtcaggag cacgaagaaa
     2101 ctgaaggccg gactctgggg gcccaaggcg ccgctcgcgc tcgcctgctg ccaagccagc
     2161 acctggccga ccaggaacgc gatcgtcatc acgccggaag ccaggaagta accgcgtccg
     2221 cccgcgaagt cgtccttgtc gatgcgattc cgcgccacct gcatcgcgcc gctcgcgagc
     2281 acgaggatca gcgtgttgat ccaaagcagg ttcggctcgt cgagctgatc ccaggcggcg
     2341 aggccgccgt ggcccgtcat ccgcatcgta taggcgctcg cgaacagccc gaacaagctc
     2401 gagacgacgg cgaggaatac ccacaagccg accttgggcg cggacgacgt cacggtctcc
     2461 tggctggtcg gcacgacgcc ctgcttcgtc cacggcttgt ccttgagccg ttggatcaac
     2521 agccaccaca ccgtgatggc cgtcagcatc gcgatcagca gggcgctcag catcggcgtc
     2581 gcggcccctt agccgtgccc cagcgagtgg tggcctttcg gcggctcgtt ctgcgggatg
     2641 aagtccttcg gttcgccggg cacgctgtag tcgtaggccc aacggtacac gaccggtagc
     2701 ttcggtcccc aattgccgtg cacgggcggc gtgttcggtg tctgccactc gagggtcgtg
     2761 gctccccacg ggttgtccgg cgcctgcttg cccttgcgca ggctgtagaa cacgttcacg
     2821 aggaacacga gctgcgcgac agccacgacg atcgcggcca gcgtgatcgc ctggttcacg
     2881 gcatgcgccg agtcgggaat gaagtccgtg gtgccatacg cgtagtagcg gcgcggcatg
     2941 ccgagaattc cgatgtagtg catcggcaaa tagatcgcgt acgtaccgag gaacgtcatc
     3001 cagaagtgga gacgacccaa cggctcgttc ggcatcttgc ccgtcatctt cgggaaccaa
     3061 tggtagatcg cgccaaacag caccatcacc ggtgacacgc ccatcaccat gtggaagtgc
     3121 ccgatcacga agtaggtatc cgagagcggc aagtcgaccg tcacgttgcc gaggaacagg
     3181 cctgtcagac cgccgtgcac gaacgtgaag atgaaccccg tggcgaacag attcggcacg
     3241 ttgaactgca agttgccgcg ccacagcgtc agcacccagt tgtagacctt gatcgcggtc
     3301 ggtatcgcga tgatcaacgt cgtcgtcgcg aagaagaacc cgaagtaggg gttcatgccg
     3361 ctcacgtaca tgtggtgcgc ccacacgatg aacgacagcg cgccgatcgc gacgatggcc
     3421 cagaccatca tgcgatagcc gaaaatgttc ttgcgcgcgt gcgtgctcag gaggtccgac
     3481 acgatgccga acgcgggcaa cgcgacgatg tacacctcgg ggtggccgaa gaaccagaat
     3541 aggtgctgga acaggatcgg gctgccgccg tcggtttcac cgagctcgcc gagcgacatc
     3601 aacgcgggca tgaagaagct cgtgccgatc gtgcggtcga gaatcatcat gatcgcggcg
     3661 acgagcagtg ccgggaacgc gaggagaccc aggatcgtgg ccacgaagat gccccatacg
     3721 gagagcggca tccgcatcaa cgtcatgccg cggcagcgcg cctggagcac ggtcgtcacg
     3781 tagttcaggc cgcccatcgt gaacgcgacg atgaagatcg cgagcgacag cagcatcagc
     3841 aagatgcccc agtcatggcc tggcgtgcct tccgtgaccg tttgcggcgg gtacagcgtc
     3901 cagccgccgc ccgtcgggcc gcccgacacg aagaagctcg cgagcagcac gatcaccgag
     3961 agcagataga cccagaagct cagcatgttc atgtacggga acaccatgtc acgggcgccg
     4021 cacatgaggg gaatcaggta attgccgaag ccgccgagga acagggccgt cagcaagtag
     4081 ataaccatga tcatgccgtg catggtcacg aactggtagt agttgtacgg cgtgatgaag
     4141 ctgaacgtct cgggaaagcc gatctgcaag cgcatcaaca gcgagagcac gagggcgacg
     4201 agccccacgc cgatcgccac gctgccgtat tggatcgcga tgactttgtg gtcctggctc
     4261 cagatgtact tttcgatgaa cgtctgcggg tcgtgcagat ggtgatcgcg gtcggcgatt
     4321 gcaacgtatg ccattgtcga attcctctag atccctagtt cgatacgctg tcagcgcagc
     4381 gtattgatgt aagccacgac gtcccggatc gcgttctcgc ccacgagcac gccggcgagc
     4441 aagcccatct gatccccgta gatgtcgtcg gggtggctgc cgcggacccc ttccttgaag
     4501 tacgtgagct gtcgttcgag ataccagtcg ctcatgccgg ccaaacgcgg tgcgttcgtg
     4561 ccccagcggc cttggccttg tgggccgtgg cacgtcgcgc acgtcgtgaa cagcgcccgg
     4621 ccgcggtcgg cgtcgccgat gaccgtggcc ggcggcggat tgctcggcag agtcgcgatg
     4681 tgggcaatca cgttctcgcg tgtcgcggga tccgccacga cgttggccat cggcgccatt
     4741 tgcggaccga attggtcgcc catcgcggtg ccgcgcatct gggtttgata cgcgatcagc
     4801 tgccgccgga tgtaccagga atcgagcccc gcgagcttcg gcgcgttcag ctgttggttg
     4861 ccttcgccct gggcgccatg acacgccgag cagaccgcgt agttagcgct gccggccgtg
     4921 gcattgccga ccggccgcgc ttgcgtttgc gcgaacgtcg gttgatttgc gagccaggct
     4981 tggtacgcgg caggctcgtc gacgacgact ttgccgcgca ttgcgaagtg ccccgtgccg
     5041 catagctcct cgcagaggat ctcgtaggtt ccgggcaccg tcggcgtgaa ccattggtac
     5101 gtcacgaggc ccgggacgag gtccatcttc acgcggaatt gcgggaccgt gaagttgtgg
     5161 agcacgtcgg tggaccgcag cagggtccgc acgggctgcc caaccggaag atgcaggatc
     5221 ggtccggcga cgatgatgtc gtcctgcccc gccggatccg cgggatcgac gccgagcgga
     5281 ttgtcgacgc tcaagtggcg aacgtcgctc gccccgagct cgttgtcacg gcccggtagg
     5341 cgaaagctcc aatgccattg tttgccgacc gcttcgacat cggccgcgtc gtcgggtacc
     5401 tgcacgaaat cggcccacac gaacagaccc ggcgtcagca tggctgcgac cccgacggtc
     5461 gtgaagatcg taaggatgac ttcgagcttc gtgctctcgg gctcgtagtg cgcagtgttt
     5521 ccggctcgcg cccggaactt ccagatgcag taggccgtga acagattcac ggccacgaac
     5581 acgatgccgc aaacccaaaa ggtcacgtcg accgtgaaat cgattgtgct ccagttcgag
     5641 gcgagcgggg tgaagtacca cggactcgca aagtgaaaga tcagcgagcc gattacgagc
     5701 aggacgataa cgactgcaag agccaccata ccgaaacaac tcccccaaac attaggcgca
     5761 cgactgccgc cgcggtccta atgcattgaa gaacggctcg gcccgctatg gcgggctctt
     5821 ggcggactat tcgacgatca gcttgccgtt catcaacaca aaatgaccag gaaacgagca
     5881 gaaatacgtg taatcgccgc cggccgtcag cttcgacaag tcgaatttca ccgaggtctc
     5941 ttggccgccg ccgatcacgg agctggccgc aaggacgcga gcgtcgccgg cgggaacgaa
     6001 attcggtgca ccggccgctt gccctgccgt tgcgactgct tggtaatcac ccgtggcggt
     6061 gagcacccaa ttatgaccca tgacattagc tgcgagctgg ccgacatgct ttagcgtgac
     6121 cgtaacttcc ttgcagctct tgctgacacg cagctctttc ttgttgaact ggatttggtc
     6181 gttgccctcg atcgtcagag agcattcttg gctccatgcc tggccgctga gcagaacacc
     6241 gcccagcgcg attacccaaa aggtccgtct cattgtggtt tccgcccctt atcgcagaat
     6301 gcagaatgtg aacggaggcg atggtagcag aggtttagcg gagcggcacg agtgcggcga
     6361 acgtgcaatt tcgtgccgcg ttcctgccgg gcgcgacgcg cgtgcgagcc gacggtcggg
     6421 cacgacgccg tcggtcggtt ctttcgatgg gcgctttccg aagtatcgga cgggtccggc
     6481 gggagccgcg atgcgcagcc gctgagctgc gacgaccacg gtcgcaaata ggtattagaa
     6541 cccacaaacc ttccgagaga gcctctattt gtagataatc gtcccaccga tcgccagaat
     6601 gtccgacgat atagacgatg gacatggatt tcgtgcgact atgattgact tgtcgagtaa
     6661 gctcgaatga ttggcctaat tcagagggta agtggggcca aggtcgaagt tgatggcgaa
     6721 ataatcgcgg aaattggtgt tggagtgcta gttctggtcg gaatcgagcg tggcgacggt
     6781 cccgacgagg ccaccaagct cgcctcgcgg cttgcggctt atcggatctt cgccgacgac
     6841 gccggcaaga tgaatcgttc cgtgcgcgag gtcggcggca gcctgctgct cgtgccgcag
     6901 ttcacgctcg cggcggacac gagcggcggg ctgcgaccga gcttctcgcg cgccgcgccg
     6961 ccggagcacg gacaggcgat gttcgacgcg ctcgtggctg cggttgccgc cacgggtgtc
     7021 gcgcatgccc atggccgttt cggcgccgac atgaaggtga cgctgacgaa cgacggcccc
     7081 gtgacgtttt ggttgcaggt gtcgccgccg tcaccgattg gctgaaatcg tttggcgtat
     7141 cattgctccg aaggaccaac ggagcgctat acccatggga ctcggcggca tcagcatctg
     7201 gcagctggcg atcgtgctac tgatcgtcgt gttgatcttc ggcacgaagc ggttgaagtc
     7261 gatcggcagc gacctcggcg cagcggtcaa ggggttcaag ggcgcgatgg actcggacga
     7321 gaaaaaaccg agcgaagagg cgcagaagcg cgtcgagagc gatgagcccg acgccgagtt
     7381 cccggagcag aaaaaggaca agagccgcag ctcgtagtgc tccggtgcgc agatgttcga
     7441 cgtcggtttt ccagagctcg tcctcgtcgc cgtcattggg ctgctggtcc taggccccca
     7501 gcgtttaccg aaggttgccg ccgagatcgg caaatgggtc agccgtgcgc gacgcactgc
     7561 cacacagctg cgccggcagc tcgagcgcga gatcgagctc agcgacatcg agcctccccc
     7621 gccgcgtccg ccgccgcgtc ccgcagcgcc tccgccgtcg gcaccgcgcg agcgcgacgt
     7681 gccggacggc ccgggcgcgc acgccgatag tcccgacacg gcggccgcag taccggctcc
     7741 gccggtttcc gacgccgagc ccaaggactc cgggcagccg acagcgggtg agccggtcgg
     7801 ggggaaggcg ccgtcggacg cgcccgcgca atcgccgggg gtggagccgg tcgaccggcc
     7861 gcccgtctag atgagcacac ctcccgataa acacgagccg gaggagcagc tggcggaagg
     7921 gacgctgatg tcccacctgc tcgagctgcg ctctcggatc atgaaggccg tgctcgccgt
     7981 gatcgtcgtg ttcctctgcc tcatgccgtt catcaacgac gtcttcgaga tcgtgtcgaa
     8041 gcccctgcga gaggcgctgc cggaggggtc ggagatgatc gtcacggacg ttgcggcgcc
     8101 gttcctgacg ccgttcaaga cgacgttctt cgtcgcgctc ttcatcgcga tgccggtcgt
     8161 gctgtttcag gtgtggcaat tcgtcgcgcc ggggctctac aagcgcgaaa agcggtttgc
     8221 gataccgttg atggtctcga gcgtcgtgct gttctacacg gggatcgcgt tcgcgtattt
     8281 catcgtgttc cgcgtgatgt tcggcttctt cgccagcgtg acgccgagcg gcgtcgagat
     8341 gacgcccgac atcagcgcct acctgagctt cgtgctcggt attttcctcg cgttcggtct
     8401 cgcgttcgag gtgccgatcg cgaccgtcat gctgatctgg agcggcctcg tgtcggcgaa
     8461 ggcgctgaaa ggcgctcggc cgtacgtgtt cctcggtgca ttcatcgtcg gcatggtgct
     8521 gaccccgccc gacgtgttct cgcagacgct gctcgcgatt ccgatgtatc tcttgtacga
     8581 gggcggactt ctgatggcgc ggctcctgat acccgagaag gtcggggtcg agaagcatag
     8641 cgaggcgtaa tccgcttcgc tgcgcggagg caccatgaag cccatcgaga gcaagctgcc
     8701 gagcgtcggc acgacgatct tcacgctgat gtcgcagctt gcggcgcagc atggcgccgt
     8761 gaatctctcg caggggtttc cggatttttc gccgccaccg ctgctgctcg atatcgtaga
     8821 gcggtgtttg cgtggtcggt atcaccagta tgcattgatg ccaggctcgc tggccttgcg
     8881 cgccgcgatc gccgtaaagc tggtctcgct gtatggcgtg accaccgacc ctggcaccga
     8941 gatcacggtc acgagcggtg cgactgaggc gattttcgac gccattcagg ccgtagtgcg
     9001 tcgcgacgac gaggtgatcg tcctcgatcc ttgttacgac tcttacgagc cctcgatcac
     9061 gctcgcgggg ggccgcgccg ttcacgtgcc gctgacgctc ccggacttcg cgatcgactg
     9121 ggagcggctc gctgcggctc tgtccgaccg cacacggctc gtgatcgtga actcgccgca
     9181 caatccgagc ggcgcgctgc tcggcgccgc cgactgggac cggcttgcgg cgttgctgcg
     9241 gccgtacgac tgctatctcc tgagtgacga ggtgtacgag cacgtcgtgt tcgatggcaa
     9301 gcggcatgcc accgcgctcg cgcaaccgga gctcaagagc cgttgcttcg cggtgttttc
     9361 gttcggcaag acttatcacg ccacgggttg gaagctcggc tactgcatcg cgccgccgga
     9421 gctgtccgcc gagctgcggc gcgttcacca gtacgtgacg ttcgcgtcca cgtcgccgtt
     9481 gcagcaggcg ctggccgaat acatgaccgc gcatcccgag caccatctcg g
//
LOCUS       DATCUD010000244         1682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59164, whole genome shotgun sequence.
ACCESSION   DATCUD010000244 DATCUD010000000
VERSION     DATCUD010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1682
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59164"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VIQ99_03580"
     CDS             complement(<1..512)
                     /locus_tag="VIQ99_03580"
                     /inference="COORDINATES: protein motif:HMM:NF039484.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEY9182254.1"
                     /translation="MSRPLVQYLLSVVAGALLPLAFAPFDQFFLAPLSYATLMYLWRD
                     AAPRRALGLGFAYGCASFGLGTYWTFIAVRIIGQAPLAIGLFLMIGLTAVLAAFIAVA
                     GYAAARWLRTRGAVAWLAAMPAAFVLAEWLRSWLFTGFGWLAAGYSQTDTWLMGYAPL
                     GGIHAISFAVL"
     gene            complement(517..1368)
                     /locus_tag="VIQ99_03585"
     CDS             complement(517..1368)
                     /locus_tag="VIQ99_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009725491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEY9182255.1"
                     /translation="MSDDTTNGDTGVSGWWQRLVQGRGDIKSREEIVEFLANFRDRGL
                     LAPDEFTMLQGVLQVSDTQVRDIMVPRSHMVIVRKDQTADEVLKIITESNHSRFPVIG
                     DDRDEVVGIVLAKDLLKHFLSGKQEFDLQPFLRPPVIIPESKRLNTLLTEFREGRNHM
                     AIVVDEYGGVSGLATIEDVLEQIIGEIDDELDPEEASSIQPQEGGRYTVAALTRIEDF
                     NEFFNTELSDADYDTVGGLLMHELGRLPRRGETLEFAGLRFKVVRGDRRRLHTLEVTR
                     LPPPTAE"
     gene            complement(1375..>1682)
                     /gene="ybeY"
                     /locus_tag="VIQ99_03590"
     CDS             complement(1375..>1682)
                     /gene="ybeY"
                     /locus_tag="VIQ99_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007185597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEY9182256.1"
                     /translation="NSEYRGKNGPTNVLAFPAAAAPAVRGESLPIGDLVICASVIARE
                     ARAQGKTPDAHWAHMVVHGTLHLLGFDHETRRKAAVMEKRERSVLAALGFPDPYSVK"
BASE COUNT          302 a          572 c          546 g          262 t
ORIGIN      
        1 agcacggcga agctgatggc gtgaatgccg ccgagcggcg cgtagcccat cagccacgtg
       61 tcggtctgac tgtagccggc cgcgagccag ccgaagcccg tgaacaacca gctgcgcagc
      121 cactccgcga gcacgaacgc ggccggcatt gccgcgagcc aggcgacggc gccgcgcgtg
      181 cgcaaccatc gcgcggccgc ataacccgcg accgcgatga acgccgcgag cacggccgtg
      241 agcccgatca tcaggaacaa cccgatcgcg agcggcgcct ggccgatgat ccgcaccgcg
      301 atgaacgtcc aatacgtgcc gaggccgaag ctcgcgcagc cgtacgcgaa ccccaatccc
      361 aacgcgcgac gcggcgcggc atcgcgccac aggtacatca gcgtcgcgta cgacaacggc
      421 gcgagaaaga actggtcgaa cggcgcgaac gcgagcggca gcaacgcacc ggccacgacg
      481 ctcagcagat actgcacgag cggccggctc aacgggtcac tcggcggtcg gcggcggcag
      541 gcgggtgact tcgagcgtgt gcagccggcg ccggtcgccg cgcaccacct tgaagcgcag
      601 gcccgcgaac tcgagcgtct cgccgcgccg cggcagccgc ccgagctcgt gcatcaggag
      661 gccgccgacc gtgtcgtagt cggcatcgga aagctcggtg ttgaaaaact cgttgaagtc
      721 ctcgatccgc gtcagcgccg ccacggtgta acggccgccc tcctgcggct ggatcgacga
      781 cgcttcctcg ggatcgagct cgtcgtcgat ctcgccgatg atctgctcga gcacgtcctc
      841 gatcgtcgcg aggcccgaca cgccgccgta ctcgtcgacg acgatcgcca tgtggttgcg
      901 gccttcgcga aactccgtca gcagcgtgtt caggcgcttg ctctccggaa tgatcacggg
      961 cggacgcagg aacggctgca aatcgaactc ctgcttgccc gagaggaaat gcttcagcag
     1021 atccttcgcg agtacgatgc cgacgacttc gtcgcgatcg tcgccgatca ctgggaaccg
     1081 cgaatggttc gactcggtga tgatcttcaa cacttcgtcg gccgtctgat ctttgcggac
     1141 gatgaccatg tggctgcgcg ggaccatgat gtcgcgaacc tgcgtgtcgg agacttggag
     1201 cacgccctgc aacatcgtga attcgtcggg tgcgagcagg ccgcggtcgc ggaagtttgc
     1261 caggaactcg acgatctctt cgcggctctt gatgtcgcca cggccctgaa cgagcctctg
     1321 ccaccacccg gatacgccgg tatcgccgtt agtagtgtcg tccgacatcg cggatcattt
     1381 tactgaatag gggtccggaa agcccagggc ggccagcacc gagcgctcgc gcttctccat
     1441 gacggcagcc ttgcggcgcg tctcgtggtc gaacccgagg agatgcagcg tgccgtggac
     1501 gaccatgtga gcccaatgcg cgtcgggcgt cttgccttgc gcgcgtgctt cgcgcgcgat
     1561 gacgctcgca cagatcacta gatcgccgat cggcaacgat tcgccgcgca cggccggtgc
     1621 ggccgcggcc ggaaacgcca gcacgttcgt cggcccgttc ttgccgcggt actcggagtt
     1681 ca
//
LOCUS       DATCUD010000245         1586 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_23906, whole genome shotgun sequence.
ACCESSION   DATCUD010000245 DATCUD010000000
VERSION     DATCUD010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1586)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1586)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1586
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23906"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VIQ99_03595"
     CDS             complement(<1..579)
                     /locus_tag="VIQ99_03595"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182257.1"
                     /translation="MKKLIGKLAAVALPMLIGATAIAQSPADTVITGGKILTVDGAFT
                     IAAAVAIDDGRIVAVGADVEVRRYVGASTRVLDVDGATVIPGLIDNHFHFARAVQRWH
                     LQARLDGVDSRREALAILAAKAAASPPGQWVMVQGGWSPQQFADAPGGFTLAELDAAA
                     PRNPLFVQQGYSVVYANSLALNAVGLDPKDGAQ"
     gene            complement(679..>1586)
                     /locus_tag="VIQ99_03600"
     CDS             complement(679..>1586)
                     /locus_tag="VIQ99_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182258.1"
                     /translation="ACRAQALFVANDFAELEASFETAGTETDFTRQISMAPLRGGLLN
                     FFDYGPDSIETNLRRLIQWRREFPESTLVGPLEAELFSAWAWQARGVGFARDVNPLQW
                     QLYGFRTEMAKASLDADAVSGRRLSPLWYQAWFDVSIDSRDRNELLEKHAEAQGLYPR
                     YYSLQRGVIRTLLPRWRSGSDSDVLAFIEDQVRNSHETERDEVYARLMWTYADTDGDQ
                     TTVYQYLKGDNWDSFRRGFSTLVERNPESDYLLNVFARIACAAASPDDYRRLRPQLES
                     RLSATAWTIETTLEKCDQKFPSRSE"
BASE COUNT          300 a          523 c          485 g          278 t
ORIGIN      
        1 ctgcgcgccg tccttcggat cgagcccgac ggcgttgagc gccagcgagt tcgcatacac
       61 gacgctgtag ccctgctgca cgaacagcgg gttgcgcggc gcggccgcat cgagctcggc
      121 gagcgtgaag ccgcccggcg catccgcgaa ctgctgcggc gaccagccac cctgaaccat
      181 gacccattgc cccggcggcg atgccgcggc tttcgcggcc agaatcgcga gcgcctcgcg
      241 tcgcgaatcg accccgtcga gccgtgcctg caggtgccag cgctgcacag cgcgcgcgaa
      301 gtggaagtgg ttgtcgatca ggcccgggat cacggttgca ccgtcgacgt cgagtacgcg
      361 cgtgctcgca cccacgtaac ggcgaacttc gacgtccgcg ccgaccgcca cgatgcggcc
      421 gtcatcgatc gcgaccgcgg cggcgatcgt gaaagcgccg tcgacggtca ggatcttgcc
      481 gcccgtgatg acggtgtcag ccggcgattg cgcaatcgcg gttgccccaa tgagcatcgg
      541 tagggcaact gccgccagct tgccgatcag cttcttcatc agctcgagcc ccccaaagcg
      601 caatgggtcg gacaccgttt ctcccgggca tcctagtctc gggccgcgca ttgcggcaac
      661 gccggttcta gcagacgctc actcggaacg cgacgggaac ttctggtcgc acttctcgag
      721 cgtggtctca atcgtccacg ccgtggctga cagccgcgat tccaactgag gccgcagacg
      781 tcggtagtcg tcgggtgagg cagctgcgca cgcgatacgc gcaaacacgt tgagcagata
      841 gtcgctctct ggattgcgct cgaccagcgt actaaagccg cgccgaaagc tgtcccagtt
      901 gtcgcctttc aaatactggt aaacggttgt ctggtcgccg tctgtgtctg cgtaggtcca
      961 catcagtcgg gcgtacacct cgtcccgttc cgtttcgtgc gagttccgaa cttgatcttc
     1021 gataaaggcc agcacgtcgc tgtctgagcc gctcctccaa cgcggcagca gcgtgcgaat
     1081 gacgccgcgc tgtagcgagt agtaacgcgg atagagcccc tgcgcttccg catgcttctc
     1141 gagcagctcg tttcggtctc gagaatcgat ggagacatcg aaccacgcct gataccacag
     1201 cgggctcagg cgccgacccg aaacggcatc ggcatcgagt gacgccttgg ccatctccgt
     1261 gcgaaacccg tagagctgcc attgaagcgg gttcacatcg cgcgcaaagc caacgccgcg
     1321 agcttgccag gcccaggcag aaaagagctc agcctctaag ggaccaacca atgtggactc
     1381 cggaaactca cgccgccact ggattagcct acgtaggttc gtctcaatgc tgtcaggccc
     1441 gtagtcgaag aaattcaaca agccgccgcg caacggcgcc atcgagatct gccgggtgaa
     1501 gtcggtctcc gtgccggccg tttcgaatga agcttcgagc tcagcaaaat cgtttgcgac
     1561 aaagagcgct tgagcacggc aggcgg
//
LOCUS       DATCUD010000246         1887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_30971, whole genome shotgun sequence.
ACCESSION   DATCUD010000246 DATCUD010000000
VERSION     DATCUD010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30971"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1582)
                     /locus_tag="VIQ99_03605"
     CDS             complement(<1..1582)
                     /locus_tag="VIQ99_03605"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182259.1"
                     /translation="MACGTHRLAALGALSLGLLPTVAVRAQPPNAWAPITAERLLAPE
                     AGDWLGYRRTYDVTAFSPLKEINRRTVRQLRPMWAYTVRDNSRWVATPIVANGLMYVS
                     EGSGRVLAFDAVTGEVVWTYVRTYPEDIASSEAYPRHRGVSIYGDTIYFGTADSFLVA
                     LDARTGALRWEAKTGDYKTGEGHAHPPLVAAGKVFIGNTGGDFAARGKFEAYDAATGA
                     RVWTLYTVPRKGEPGYETWTENGQWPPLGAAAWNTASYDAELGLVYFSTGQPTPWTTA
                     SRGPGDSLYSNTVIAADAETGQIRWHFQLVPADQWDRSGYEGMLVDLELDGVMRKALV
                     TTGKIGWGVVLDRATGEFLRAFRTGYDNVITGWTDAGRPIYDPRAIPTPADVDSGKVF
                     EICPHIHGVRNLQAPSYSPLTGYYYLGVNNSCMNAQVVTPVFRPGLGLTGVTYTASLA
                     PGYDYVGEFVAFDPKSGERAWVYRPPSGAPMTASALSTAGGLVFGGTADRQFFALNSE
                     TGELLWQTRLNGDVSGAPV"
     gene            1661..>1887
                     /locus_tag="VIQ99_03610"
     CDS             1661..>1887
                     /locus_tag="VIQ99_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005996042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ada metal-binding domain-containing protein"
                     /protein_id="HEY9182260.1"
                     /translation="MLPADVCHAACDAKDRRFDGRFYVGVKSTGIYCRCICSARQVKR
                     ANRTFWPSAAAAEAAGFRPCLLCRPERAPGLA"
BASE COUNT          294 a          661 c          632 g          300 t
ORIGIN      
        1 tgaccggcgc gccggacacg tcgccgttca ggcgcgtctg ccagagcagc tcgccggttt
       61 cggagttcaa cgcgaagaat tgccggtcgg cggtgccgcc aaacaccaag ccgcccgccg
      121 tcgaaagcgc ggacgcggtc atcggagcgc cgctcggcgg ccggtagacc caagcgcgtt
      181 cgccgctctt aggatcgaac gcaacgaact cgccgacgta gtcgtagccc ggcgcgagcg
      241 acgccgtgta cgtgacgccg gtgagcccca agcccggacg gaacaccggc gtcacgacct
      301 gtgcattcat gcacgagttg ttgacgccga ggtagtagta gcccgtcagc gggctgtagc
      361 tcggcgcctg caagttccgc acgccgtgga tgtgcgggca aatctcgaac accttgccgg
      421 agtcgacgtc cgccggcgtc gggatcgcgc gcgggtcgta gatcggccgg ccggcatcgg
      481 tccaccccgt gatcacgttg tcgtagccgg tgcgaaacgc gcgcaagaac tcgccggtcg
      541 cgcgatcgag cacgacgccc cagccgatct tgccggtcgt gacgagcgct ttgcgcatga
      601 cgccgtcgag ctcgagatcg acgagcatgc cctcgtaccc ggaccggtcc cattggtccg
      661 ccggcacgag ctgaaagtgc cagcgaatct gccccgtttc ggcgtcggcc gcgatcacgg
      721 tgttcgagta cagagaatcg ccggggccgc gcgacgccgt cgtccacggc gtcggctgcc
      781 cagtcgagaa ataaacgagt ccgagctcgg cgtcgtagct cgccgtgttc cacgccgctg
      841 cgccgagcgg cggccattgg ccgttctcgg tccaggtctc gtagcccggc tcgcccttgc
      901 gcggcacggt gtacaacgtc cacacgcgcg caccggtcgc cgcgtcgtag gcctcgaact
      961 tgccgcgcgc ggcgaagtct ccgcccgtgt tgccgatgaa cacttttccg gccgcgacga
     1021 gcggcgggtg tgcgtggccc tcgccggtct tgtagtcacc ggttttcgcc tcccaccgca
     1081 gcgcgcccgt gcgcgcgtcg agcgcgacga ggaaactgtc ggccgtgccg aaatagatcg
     1141 tgtcgccgta gatcgacacg ccgcgatgcc gcggatacgc ctccgacgaa gcgatgtcct
     1201 ccggatatgt ccggacatac gtccacacga cctcgcccgt gaccgcgtcg aacgcaagca
     1261 cgcgcccgct gccttccgat acgtacatga gcccgttcgc gacgatcggc gtcgcgaccc
     1321 agcggctgtt gtcgcgcacg gtatacgccc acatcggccg taactgccgg accgtgcggc
     1381 ggttgatctc tttcagcggc gaaaacgcgg tcacgtcgta cgtgcgacgg tagccgagcc
     1441 agtcgccggc ctcgggcgcg agcaggcgct cggccgtgat cggcgcccaa gcgtttggcg
     1501 gctgcgcgcg caccgccacg gtcggcagca agccgagcga gagcgcgccg agcgccgcca
     1561 gtcgatgtgt tccgcatgcc acggcgcgcg actatagcat ttggaattcg atgtccgaaa
     1621 acggcgagac gcgggcgccg gcaggcgtta aattgccgcc atgctacccg ccgatgtctg
     1681 ccacgccgct tgcgacgcca aggaccgccg tttcgacggg cggttctacg tcggcgtgaa
     1741 atccacgggg atctattgcc gctgcatctg ctccgcgcgg caggtcaaac gcgcgaaccg
     1801 gacgttctgg ccgtcggccg ccgccgccga ggcggccggc tttcgaccgt gcttgttgtg
     1861 ccgccccgag cgcgcgccgg ggttggc
//
LOCUS       DATCUD010000247         1856 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2678, whole genome shotgun sequence.
ACCESSION   DATCUD010000247 DATCUD010000000
VERSION     DATCUD010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2678"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            157..846
                     /locus_tag="VIQ99_03615"
     CDS             157..846
                     /locus_tag="VIQ99_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182261.1"
                     /translation="MKIVKLALIPLAVATLAGSAIAQQQPAQQPGQQANQPPPQPMSF
                     FVTSVGKGDGGNLGGLAGADAHCQSLAAAVGRGNVTWRAYLSAGAQGPNGVTHARDRI
                     GRGPWFNARGALIASNVDDLHQDRNNIRKPTALNEKGEEVNGVGNQPNVHDMLTGSDS
                     TGRLVPGNVALTTCNNWTSNSTGNAMVGHHDRLGGPNASWNAVHSSRSCSQEDLVATG
                     GAGLFYCFVAQ"
     gene            995..1729
                     /locus_tag="VIQ99_03620"
     CDS             995..1729
                     /locus_tag="VIQ99_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182262.1"
                     /translation="MLRTLNTILLTASALCLLVAFWNRNDIPGTLVFHPGLEHDPKQR
                     ALTKAPLTVPYAGIDYRVEPLYDYELYGLVVSYRMHDGEDSMHRWSKDRLNMADLCVV
                     WSDTAFSEHLTKLDFWNGIFTCNVQTRDSVAWAHFDMNQLSNNHLISDDPFIRERVDD
                     VRIGDQIRVKGWLARYGAVGGELRGTSTTREDTGNGACETIYVNEFEIVEPGFSRWRL
                     AMYLSLATLMATLLVHFVLPYKPYRD"
BASE COUNT          340 a          613 c          591 g          312 t
ORIGIN      
        1 gtattactgc caacgcgccg gggtcgatcc catctagccg atccgccgcg cttcaggttc
       61 cttcagatcg gttgccatcg gtcgcgagta caatcctcgt agctgcgggg tggggcctcg
      121 cggcattcga acaacaacat ccgggggact cgtccgatga aaatcgtgaa gctcgcgctc
      181 attccgttgg ctgtcgcaac gctcgcaggc tctgcgatcg cgcagcagca acccgctcag
      241 cagcccggtc agcaggcgaa tcagccgccg ccgcagccga tgagcttctt cgtgacgagc
      301 gtcggcaaag gcgacggcgg caacttgggg gggctcgcag gcgcggatgc gcattgtcag
      361 tcgctggccg cggcggtcgg gcgcggcaac gtgacatggc gcgcttacct gagcgccggt
      421 gcgcagggcc cgaacggcgt cacgcatgcg cgcgaccgca tcggccgcgg cccttggttc
      481 aacgcgcgtg gtgcgctgat cgcatcgaac gtggacgatc tgcaccaaga ccgcaacaac
      541 atccgcaagc cgaccgcgct gaacgagaag ggtgaggaag tcaacggcgt cggcaaccaa
      601 ccgaacgtgc acgacatgct cacgggctcg gactcgaccg gccggctcgt gcccggcaat
      661 gtcgcgctga cgacgtgcaa caactggacg agcaacagca ccggcaacgc gatggtcggt
      721 catcacgatc gtctcggcgg cccgaacgcg tcgtggaacg cggtccacag ctcgcgcagc
      781 tgcagccaag aagacctcgt cgcgaccggg ggcgccggac tgttctactg cttcgtcgcg
      841 cagtaaggct cgtaaaccct cggtgccggt ggttcggttc ggttcaaccg aaccaccggc
      901 atttcggttg agccgaaccg aaccaccggc acctcttcat gaattcgtga cgcggctccg
      961 cacgccgcgg gcgcgccggc gctagcgtgc gcggatgctg cggacgctga acacgattct
     1021 gctcacggcg agcgctctct gtctcctcgt tgcgttctgg aatcgcaatg acatcccggg
     1081 aacgctcgtg tttcacccgg gcctcgagca cgatccgaag caacgcgcgc tgacgaaagc
     1141 gccgctgacg gtgccctacg ccggcatcga ctaccgcgtc gagccgctgt acgactacga
     1201 gctctacggc ctcgtcgttt cataccgtat gcacgacggc gaggactcga tgcatcgctg
     1261 gtcgaaggat cgcctgaaca tggctgatct ctgcgtcgtt tggagcgaca ccgcgttcag
     1321 cgagcatctc acgaagctcg atttctggaa cggcatcttc acctgcaacg tgcagacgcg
     1381 cgacagcgtc gcctgggcgc acttcgacat gaatcagctt tcgaacaacc acttgatctc
     1441 cgatgacccg ttcattcgcg agcgagtgga cgacgtacgc atcggcgatc agatccgcgt
     1501 caagggctgg ctcgcgcgtt acggtgcggt cggcggcgag ttgcgcggca ccagcacgac
     1561 acgcgaggac accggcaacg gcgcgtgcga gacgatctac gtgaacgagt tcgagatcgt
     1621 cgagcccggg ttcagccgct ggcgcctggc gatgtatctg tcgctcgcga cgctgatggc
     1681 cacactgctc gttcatttcg tcttgccgta caagccctat cgcgattgac cggacgccct
     1741 cctggacccc accgcgcccg gcacgcacaa tgccgcggag cgatcgtggg gcccaagcat
     1801 ggcggagttc gacggcaaga atttcatcgg cggcgaatgg cggcccgcga cgagcg
//
LOCUS       DATCUD010000248         2076 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2693, whole genome shotgun sequence.
ACCESSION   DATCUD010000248 DATCUD010000000
VERSION     DATCUD010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2076)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2076)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2076
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2693"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..579)
                     /locus_tag="VIQ99_03625"
     CDS             complement(<1..579)
                     /locus_tag="VIQ99_03625"
                     /inference="COORDINATES: protein motif:HMM:NF013768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HEY9182263.1"
                     /translation="MLAILVVNDREVQKKILNVSRDFGADELKRASNYLNDYCGGRSL
                     AEIRELLLGELKRTRASMNALMVEAIEMAQKVFPEVEPEPEFVVAGETNLMGLDQVAD
                     VENLKSLFEAFGRQRDILHLLDQSMKADGVQIFIGHESGYELLDSYSIVAAPYANEDA
                     TMGVLGVIGPTRMAYERVIPIVDITAKLLGRAL"
     gene            complement(495..1139)
                     /locus_tag="VIQ99_03630"
     CDS             complement(495..1139)
                     /locus_tag="VIQ99_03630"
                     /inference="COORDINATES: protein motif:HMM:NF013768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182264.1"
                     /translation="MASDKPRGVLDERAQTLLRILVDKYIREGQPVGSRTLSRESGLE
                     LSPATIRNIVSDLEELGFVSSPHTSAGRVPTIKGYRFFVDTLIKLTPPKGEELLRFSQ
                     SLSEASGDPQTLALSVSNLLSAVTSLAGIVTVPRRAQTALRQIEFLPLSGHRVLAILV
                     VNDREVQNKILDVPRDFGADELRRASACSPSSSSMTARSRKKSSTFREISAPTS"
     gene            1226..>2076
                     /locus_tag="VIQ99_03635"
     CDS             1226..>2076
                     /locus_tag="VIQ99_03635"
                     /inference="COORDINATES: protein motif:HMM:NF039482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HEY9182265.1"
                     /translation="MPREFTTVALWGRLGEHSVTEPAQQILSHLVKRRIQVLASVVAD
                     PMRALKGAVHVDEREIATKADLVIAIGGDGTMLHAARHVAARDVPLIGINRGRLGFLT
                     DVSPEHMLEALDAILSGDHLAERRLMLVANLPNTRANDALFALNDIVLQKGDTGRLVD
                     FTTEVDGIYVNTHRGDGLIVATPTGSTAYALSCGGPIIQPNVDALVMVPVCPHTLSDR
                     PLVLPSTSRVRVTLDGAGGSAAQVVCDGEPLGRMSEGETLTISLATRSVTLLHPRDYN
                     YYELLRS"
BASE COUNT          398 a          658 c          627 g          393 t
ORIGIN      
        1 caaggctcgg cccagcaatt tggccgtgat gtcgacgatc ggaatgaccc gctcgtacgc
       61 catgcgcgtc ggaccgatga ccccgaggac gcccatcgtc gcgtcttcgt tcgcgtacgg
      121 ggccgcgaca atactataag aatcaagcag ctcgtatccc gattcgtgac cgatgaagat
      181 ttggacgccg tccgccttca tgctctgatc cagcaagtgc aggatgtcgc gctgccggcc
      241 gaaggcctcg aacaggctct tcagattctc cacatcggcg acctggtcga ggcccatcag
      301 attcgtctca ccggcgacga cgaactcggg ctcgggctcg acctccggaa aaaccttctg
      361 cgccatctcg atggcctcga ccatcagtgc attcatcgag gcgcgcgttc gcttcagctc
      421 gccgagcagc agctcgcgaa tctccgccag actccgcccg ccgcagtagt cgttcaggta
      481 gttgctcgcg cgcttcagct cgtcggcgcc gaaatctcgc gaaacgttga ggattttttt
      541 ctggacctcg cggtcattga cgacgaggat ggcgagcacg cgctggcccg acgcagctcg
      601 tcggcgccga aatcacgcgg aacatccaag attttgttct ggacctcgcg gtcgttgacc
      661 acgaggatgg caagcacacg atgcccggac aacggcagga actcgatctg gcgcagcgcg
      721 gtctgcgcgc gccgtggaac ggttacgatg cccgcaagac tcgtcaccgc cgaaagcaaa
      781 ttcgataccg atagcgccag cgtctgcggg tcgcccgacg cctcgctaag gctctggctg
      841 aatcgcaaca gctcttcgcc cttcggtggc gtcagcttga tcaacgtgtc gacgaaaaat
      901 cggtatccct tgatcgtggg gactctacct gcggacgtat gtggggagct gacgaagccg
      961 agctcctcca gatcggaaac gatgttgcgg atcgtggcag ggctcaactc caagcccgat
     1021 tcgcgcgaca gtgtgcgaga cccgacaggt tgtccttcgc gtatgtattt gtcgacgaga
     1081 atgcgcagta gcgtctgtgc gcgctcgtcc aaaacacctc gaggtttgtc gctcgccata
     1141 ggcccaggct gtgataacgt agagcccgct gttcagcgcc ttgcacgcta gcaaccggtt
     1201 cccgccactg tcaagaaagc cgattatgcc gcgtgaattc acgacagtcg cgctatgggg
     1261 ccgcctcggc gaacacagcg tcactgagcc ggcgcagcag atcctctcgc atctcgtcaa
     1321 acggcgtatc caggttctgg cgtcggtcgt cgccgaccct atgcgtgctc tgaagggtgc
     1381 cgtgcacgtc gacgaacgcg agatcgcgac gaaagcggat ctcgtaatcg cgatcggcgg
     1441 cgacggaacg atgctgcacg ccgcacgtca tgtcgccgca cgcgacgtcc ccttgatcgg
     1501 aatcaatcgc ggccgtctgg gcttcctcac cgatgtttcg ccggagcaca tgctcgaggc
     1561 cctcgacgcg attctctccg gcgaccacct cgccgagcgc agattgatgc tcgtcgccaa
     1621 cttgccgaat acgcgtgcga acgacgcgct gttcgcgttg aacgacatcg tcctacagaa
     1681 aggcgatacg gggcgcttgg tcgacttcac gaccgaagtc gacgggatct acgtgaacac
     1741 gcatcgcggc gacggattga tcgtggcgac gccgaccgga tcgacggcct atgcgttgtc
     1801 gtgcggtggt ccgatcattc agccgaacgt cgatgcgctc gtgatggtgc ccgtgtgccc
     1861 gcatacgctc agcgatcgtc cgttggtgtt accgagcacg agcagggttc gggtgacact
     1921 cgatggcgcg ggcggcagcg cggcgcaagt cgtgtgcgac ggcgagccgc tcggcagaat
     1981 gagcgaagga gaaacactca cgatctcgct cgccacgcgg agcgtcacgc tgctgcatcc
     2041 gcgcgactac aactattacg aattgctgcg ctcgaa
//
LOCUS       DATCUD010000249         2851 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_30987, whole genome shotgun sequence.
ACCESSION   DATCUD010000249 DATCUD010000000
VERSION     DATCUD010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30987"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            329..718
                     /locus_tag="VIQ99_03640"
     CDS             329..718
                     /locus_tag="VIQ99_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011984723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEY9182266.1"
                     /translation="MSVQTKTLLTAAGVSLLVATIAGAVGSHALSFPDERALGSFETA
                     VQFQFFHGLGVIAAAIVGIQGRAGRARAVAAWLMLIGTVLFCGSIYARALGAAPGIVA
                     VAPYGGVSFMIAWLAFAVSPWLGDRGA"
     gene            715..1554
                     /locus_tag="VIQ99_03645"
     CDS             715..1554
                     /locus_tag="VIQ99_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007830536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9182267.1"
                     /translation="MSPFRLPSGAAVPRLGQGAWQIGEQRGRRAAELLALQVGIDLGL
                     VLIDTAEMYGNGRSEELVATAVAGRREHVYLVSKVLPHNASRRGTVAACEQSLKRLKT
                     DYLDLYLLHWQGSVPLEETLEAFTALRDRGLVRHYGVSNFDRDDLERAASLPGGAAIA
                     TNQVLYNLEQRGVEWDLLPWCRERGMPLMAYSPLGSDSPRLRTHPVLKAMAARIGATP
                     ARIALAWLLREPDVIVIPKASSEAHVRDNHAALELDLTAGDLDDLERAFPPPKRATPL
                     AMI"
     gene            complement(1564..2022)
                     /locus_tag="VIQ99_03650"
     CDS             complement(1564..2022)
                     /locus_tag="VIQ99_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019339856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LEA type 2 family protein"
                     /protein_id="HEY9182268.1"
                     /translation="MRAATPFTLFGLLIVAGCASLPNTDPLNVDVAGIEPLPGEGLEL
                     RLAVSVRIQNPNDVAVEYTGTALSLELNGRDLASGVSDAAGTVPRYGEAVLTIPVTIS
                     AFDMARQVLGFANAEDQREIAYRVRGKLEGGWFGTRRFSDEGTFELPAPR"
     gene            complement(2027..>2851)
                     /locus_tag="VIQ99_03655"
     CDS             complement(2027..>2851)
                     /locus_tag="VIQ99_03655"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017329184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY9182269.1"
                     /translation="EPPSKTAVASLPTVVSAPDLAGVDVVFLAMHGGSGEDGTVQALL
                     DLAGIPYTGSGKLGSALGWDKDVAKRLFLAAGVPTPDWLMAPASPDVVAKRLGFPLIV
                     KPNGQGSTVGLTLVKAPSELQAAIDLAGGFDGEVMLERYIEGRELTVGILEDQALAVG
                     EIIPRTGPIFDYAAKYQAGGAEEIFPAELTAEQTARAQDLALRVHRSLKLDTYSRVDF
                     RMDAQGDLWCLEVNTLPGLTAASLLPRAAAAVGISFPELCERICRGALARRGTKPR"
BASE COUNT          449 a          978 c          972 g          452 t
ORIGIN      
        1 gtgccttcgc ggcgaaagcc gcgaagtgga cgggatgaat tcagggaaac cgcaacgcga
       61 agcgcgccgg caaccctgag ccaagccggc ggtacaccgc cggacggtgc agagactacc
      121 tgagagctaa gagtgctctt aatgacaggc gcgagcgtcc cgcaccccac ccgaagcaac
      181 tctcggcggg tgaagagata gtccacttcc gccggaaacg gcggggcgag tgaatccctt
      241 ggtcgtaggt tcaagtccta ccgggcccac catctccctc gcggccgcaa ccgtgtgagt
      301 cgcgtcacgc tctggtagcc tccgcctcat gtccgtccag acgaaaactc tgctgaccgc
      361 cgccggcgtg tcgttgctcg tcgcgacgat cgcgggcgcg gtcggcagcc acgctctatc
      421 gttccccgac gagcgggcac tcgggagctt cgagacggcc gtgcagtttc agttcttcca
      481 cggcctcggt gtcatcgccg ccgcaatcgt gggcattcag ggacgcgccg gccgagcacg
      541 cgccgtggcc gcgtggctga tgctaatcgg cacggtgctc ttctgcggca gcatctatgc
      601 acgagcgctc ggtgcggcgc ccggcatcgt cgccgtggcg ccgtatggcg gagtctcgtt
      661 catgatcgcg tggctcgcgt tcgcggtgag cccgtggctc ggggaccgcg gcgcatgagc
      721 ccgtttcggc tgccgtccgg cgcggcggtc ccgcggctcg gccagggcgc gtggcagatc
      781 ggggagcagc gcggcaggcg cgccgcggag ttgctggcgc ttcaagtcgg catcgatctc
      841 gggttggtgc tgatcgacac ggccgagatg tacggcaacg gccgctcgga agagctcgtg
      901 gccacggcgg tcgcggggcg gcgcgagcac gtctatctcg tcagcaaggt cctgccccac
      961 aacgcgtcgc gccgcggcac cgtcgcagcg tgcgagcaga gcttgaaacg cctgaagacc
     1021 gattacctcg acctgtacct gctgcactgg caagggtcgg tgccgctgga ggaaacgctc
     1081 gaagcgttca cggcgttgcg ggatcgcggg ctggtccggc actacggcgt cagcaatttc
     1141 gatcgcgacg atctcgagcg agcggcgtcg ttgccgggcg gtgccgcgat cgcgacgaat
     1201 caggtgctgt acaacctcga gcaacgcggc gtcgagtggg acctgctccc atggtgccgc
     1261 gaacgcggta tgccgctcat ggcgtattcg ccgctcggca gcgactcgcc gcggctgcgt
     1321 acgcacccgg tgctgaaggc gatggccgca aggatcggtg ccacaccggc gcgaattgcg
     1381 ctcgcatggc tgctgcgcga acccgacgtg atcgtgatac cgaaagcctc gagcgaggcc
     1441 cacgtgcgcg acaaccacgc cgcgctcgaa ctggacctca cggccggcga tctcgacgac
     1501 ctcgagcgcg cgtttccgcc gccgaagcgt gcgactccgc tggcgatgat ctgagagccg
     1561 tcgctagcgc ggcgccggca gctcgaacgt gccttcgtcg ctgaagcgcc gcgtgccgaa
     1621 ccagccgcct tcgagcttgc cgcggacgcg atacgcgatt tccctctggt cctcggcgtt
     1681 tgcgaatccc agcacctggc gcgccatgtc gaacgccgag atcgtgaccg ggatcgtcag
     1741 cacggcttcg ccgtagcgcg gcacggtgcc cgctgcgtcg ctgacgccgc tcgcgagatc
     1801 gcggccgttc aattccagcg atagtgcggt gcccgtgtac tcgaccgcga cgtcgttcgg
     1861 attctggatc cgcacgctca cagcgagacg gagctcgagg ccttcgcccg gcaacggctc
     1921 gatgccggcc acgtcgacgt tcagcgggtc cgtgttcggc aagctcgcgc agcccgcgac
     1981 gatcagtaag ccgaacagtg tgaaaggcgt cgctgcgcgc atgcggctac ctcggcttgg
     2041 tgccgcgacg cgcgagcgcg ccgcggcaga tgcgctcgca gagctcggga aagctgatgc
     2101 cgaccgcggc cgccgcgcgg ggcagcaagc tcgcagcggt cagccccggc agcgtgttga
     2161 cctcgaggca ccacagatcg ccctgtgcgt ccatccgaaa atccacgcgg ctgtaggtgt
     2221 cgagcttcag cgaccgatgc acgcgcaaag cgagatcctg cgcgcgcgcc gtttgctcgg
     2281 ccgtgagctc cgccggaaag atctcctcgg cgccaccggc ctggtatttg gccgcgtagt
     2341 cgaagatcgg gccggtgcgc ggaatgatct cgccgaccgc gagcgcctga tcctcgagaa
     2401 tgccgaccgt cagctcgcgg ccctcgatgt aacgctcgag catgacctcg ccgtcgaacc
     2461 cgcccgcgag gtcgatcgcg gcttgcagct cggacggcgc tttcacgagc gtgagcccga
     2521 ccgtcgagcc ctggccgttc ggcttcacga tcagcggaaa cccaagtcgt ttcgcgacga
     2581 cgtctggcga cgccggcgcc atgagccaat ccggcgtcgg cacgccggcc gccaggaaca
     2641 agcgcttcgc gacgtccttg tcccacccga gcgcgctgcc gagcttgccg ctgcccgtgt
     2701 aaggaatgcc ggcgagatcg agtagcgctt gcacggtccc gtcttcgccg ctgccgccgt
     2761 gcatagccag gaacacgacg tcgacgccgg cgagatcggg cgctgagacg acggtcggca
     2821 agctcgcgac cgcggtcttg ctcggcggct c
//
LOCUS       DATCUD010000250         1751 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_38024, whole genome shotgun sequence.
ACCESSION   DATCUD010000250 DATCUD010000000
VERSION     DATCUD010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38024"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1238
                     /locus_tag="VIQ99_03660"
     CDS             <1..1238
                     /locus_tag="VIQ99_03660"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEY9182270.1"
                     /translation="ADLAIADGAIVGVGSAPQGFAPDRVIDGRDRIVLPGLVNTHTHL
                     AMTLMRNYADDLAFWPWLLERVKPLEDHLTPEDVRIGARLGLAELIRGGTTCFHDMYF
                     HLDHVADEVDRCGLRARLCGALFDNSGQGEALLRAAIEVHDQWHGKAGGRVTIGLAPH
                     STYLCSPAYLREIVAEALRLTCGLHIHVAETEREVGESRERHGVTPVQHLADLGCFRV
                     PTVAAHAIYVDDADRRLLRDGGVSVAHNPSSNLKLANGIAPVQALLDDGVNVGLGTDG
                     AASNNNLNLFEEMHLAALLQKWQRRDAEALPAREVLRMATIRGAQALRLDDVIGSLEV
                     GKRADVIMIDAAQPHLAPRHDPVALLVYSAQAADVCTVLVDGRILLEDRALLTIDEEA
                     LLARAAQQTRSLLSRAARR"
     gene            complement(1254..>1751)
                     /locus_tag="VIQ99_03665"
     CDS             complement(1254..>1751)
                     /locus_tag="VIQ99_03665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182271.1"
                     /translation="QPFEIVDGVTIQPGTYEHEELQLVYLGDLSQPFNFQMRSTIGGR
                     WGGDRVSLEPTFSYRVGDKLTSEFAYNYNDFDLPVPNGQFTADLWRLRVSYSFTPRML
                     LQLLTQYNEQEDELSSNLRFSWLQSANAGLYFVYNEIDERGVGALPRGREFVIKYSRI
                     FDLLR"
BASE COUNT          299 a          592 c          581 g          279 t
ORIGIN      
        1 acgcggatct cgcgattgcc gacggcgcaa tcgtcggcgt gggctccgcg ccccagggtt
       61 tcgcgccgga tcgagtgatc gacggacgcg atcgtatcgt gctaccgggc ctcgtgaata
      121 cgcacacgca tctggcgatg acgctgatgc ggaactacgc cgacgatctc gcgttctggc
      181 cgtggctgct cgagcgcgtg aagccgctcg aggaccattt gacacccgag gacgtccgga
      241 tcggcgcacg gctcggcctc gcggagctga tccgcggcgg cacgacgtgc tttcacgaca
      301 tgtacttcca tctcgaccac gtcgccgacg aggtcgatcg ttgcggtcta cgcgcgcggc
      361 tgtgcggcgc actgttcgac aactcgggcc aaggcgaagc gctgctgcgc gcggccatcg
      421 aggtccacga ccagtggcac ggcaaagccg gcggccgcgt caccatcggg ctcgcgccgc
      481 actccaccta tctgtgcagc cccgcatacc tgcgcgagat cgtcgcggaa gccctgcgcc
      541 ttacgtgtgg gttgcacatc cacgtggccg aaaccgagcg cgaggtcggc gagagccgcg
      601 agcgccacgg agtgacgccg gtgcagcacc tcgccgatct cggctgcttc cgcgtgccga
      661 ccgtcgccgc gcacgcgatt tacgtcgacg acgcagatcg acgcttgctc cgcgacggcg
      721 gcgtcagcgt cgcgcacaac ccgagcagca acttgaagct cgcgaacggc attgcgccgg
      781 tgcaggcact gctcgacgac ggcgtgaacg tgggcctcgg gacggacggc gcggccagca
      841 acaacaatct gaacctgttc gaggagatgc atctcgcggc gctgctgcag aaatggcaga
      901 ggcgcgatgc cgaggcgctg ccggcgcgcg aggtgctccg gatggcgacg attcgcggcg
      961 cgcaggcgct taggctagac gacgtgatcg gctcgctcga ggtcggcaaa cgcgccgacg
     1021 tgatcatgat cgacgcggcg cagccgcatc tcgcaccgcg ccacgacccc gtcgcgctac
     1081 tcgtgtattc ggcgcaagcg gccgacgtct gcaccgtgct ggtcgacggt cggatcctgc
     1141 tcgaggatcg tgcgctcctg acgatagacg aggaagcgct gctcgcgcgg gccgcgcaac
     1201 agacgcgcag tctgctcagc cgcgccgctc gccgctgacg cgcgggcagt cggctaccgc
     1261 agcaggtcga agatccggct gtatttgatc acgaactcgc gaccgcgcgg caacgcgccg
     1321 accccgcgct cgtcgatctc gttgtagacg aaatagagtc ccgcgttcgc cgactgcagc
     1381 cacgagaagc gcagattcga cgacagctcg tcctcttgct cgttgtactg cgtcaggagc
     1441 tgcagcagca tccgcggcgt gaacgagtac gacacgcgca gccgccatag gtcggccgtg
     1501 aactggccgt tcggcacggg cagatcgaag tcgttgtagt tgtacgcgaa ctccgatgtg
     1561 agcttgtcgc cgacgcgata gctgaacgtc ggctcgaggc tcacccggtc gccgccccaa
     1621 cgtccaccga tcgtcgaccg catctggaag ttgaacggct gcgacaggtc gccgaggtac
     1681 acgagctgca gctcctcgtg ctcgtaagtt cccggctgaa tggtcacgcc gtccacgatc
     1741 tcgaacggct g
//
LOCUS       DATCUD010000251         1797 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_94961, whole genome shotgun sequence.
ACCESSION   DATCUD010000251 DATCUD010000000
VERSION     DATCUD010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1797
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94961"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VIQ99_03670"
     CDS             <1..326
                     /locus_tag="VIQ99_03670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182272.1"
                     /translation="RLVARGNATVIRRETMPTFGNDWGWAEELAPPFDTNGRSIGDFL
                     AWFADQTGRTIVFADAAAERLAQERITGSISVDAPVEKLSLVLATTDLEARLEDDGRV
                     VISRR"
     gene            415..>1797
                     /locus_tag="VIQ99_03675"
     CDS             415..>1797
                     /locus_tag="VIQ99_03675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182273.1"
                     /translation="MLRARWFSVVCCVLLAAIAAAQPTGPYRGRSVQSVIDELRAAGS
                     PFVYSSNLLTPALRVESEPAPSGPLELARAVLAPHGLTVREEAGVWLVVRAEPSELAP
                     ALPARLVVTAQAAYSGLPITAGTVQLDPPSGPFAAVVDGRAELAGLAPGRHSLTVRGE
                     GFLPERLTVNAAAGTTVAVTVGLFEAVAKLDEITVVASRYDVTNDIQPSAAYFSRDEI
                     EALASIGDDTVRVAHRLPGVASNEFSARPYVRGGAMNEFAVLLDGIRLIEPYHLRDFQ
                     GMVSAVDQRIVETAAIHAGGFPAEYGDVLSGLMIIEPREPTQLEHEIGLSVLYTSVLS
                     SGTFADQRASWLVSARNSNLDRVVADEIGQPAYSDVFVRVGGDLGAKHRLMFGGLEFR
                     DDVILTPEETATDLEDANSDTHNQQLWLKLHSSWSDNVSSDMWLYSTRFASSRRESVV
                     DLDEIVGVVND"
BASE COUNT          273 a          601 c          617 g          306 t
ORIGIN      
        1 aacggctcgt cgcccgcggc aacgcgaccg tgattcgccg ggaaaccatg ccgaccttcg
       61 gcaacgattg gggctgggcc gaggagctcg cgccaccgtt cgacacgaac ggccgctcga
      121 tcggcgattt cctcgcttgg tttgccgatc agaccggccg caccatcgtg ttcgccgatg
      181 ccgccgccga gcggctggcg caggagagga tcacggggtc gatcagcgtc gacgccccgg
      241 tcgagaagct ctcgctcgtg ttggcaacca cggatctcga ggcgaggctc gaggacgacg
      301 ggcgcgtggt catcagccgg cgctagagcg aaccgcggcg actacggatc cctcacgccg
      361 gccgccattg cgtacaatcg gccgccgcaa cgtgcggtgg tccggtaggc aatggtgttg
      421 cgagctcgct ggttttcggt cgtctgctgc gtgctcttgg cggccattgc cgccgcgcag
      481 cccaccggcc cataccgcgg ccgcagcgtg cagtcggtca tcgatgagct gcgcgcagcc
      541 gggtcgccgt tcgtttacag cagcaacctc ctgacaccgg ccctgcgcgt ggagtcggag
      601 ccggccccct cggggccgct cgagctcgcg cgcgcagtgc tcgcgccgca cggcctgacc
      661 gtccgcgagg aggccggtgt ctggctcgtc gtgcgcgccg agccgtccga gctcgcgccc
      721 gcgctcccgg cgcggctcgt cgtgacggcc caggccgcgt acagcgggtt gccgatcacg
      781 gcaggcacgg tgcagctgga cccgccctcg gggcctttcg ccgccgtcgt cgacggccgc
      841 gccgagctcg ccgggttggc accggggcgg cacagcctga cggtgcgcgg agagggtttc
      901 ctgccggagc ggttgaccgt gaacgcagca gccggaacga cggttgccgt caccgtgggg
      961 ctgttcgagg ccgtcgccaa gctcgatgag atcacggttg tggcgagccg ttacgacgtg
     1021 accaacgaca tccagccttc ggccgcctat ttttcgcgcg acgagatcga ggcgttggcc
     1081 tcgataggcg acgataccgt gcgcgtcgcc catcggttgc ccggggtcgc gagcaacgag
     1141 ttctctgccc gcccgtatgt ccgcggcgga gcgatgaacg agttcgccgt gctgctcgac
     1201 ggtattcgcc tgatcgagcc gtaccacctc cgggacttcc agggcatggt cagcgccgtg
     1261 gatcaacgca tcgtggagac cgcagccatt cacgccggcg gtttcccggc cgagtacggc
     1321 gatgtcttga gcggcctcat gatcatcgag ccgcgcgagc ccacgcagct cgagcacgag
     1381 atcggtttga gcgtgctcta cacgtcggtg ctttccagtg gcacgttcgc cgatcagcga
     1441 gcgtcgtggt tggtgtcggc tcggaacagc aatctggacc gcgtcgtcgc cgacgagatc
     1501 ggtcaaccgg cgtattccga cgtgttcgtg cgtgtcggtg gggatctcgg cgccaagcac
     1561 cggctgatgt tcggaggcct cgagtttcgc gacgacgtga tactcacgcc cgaagaaacg
     1621 gcgacggacc tcgaagatgc caacagcgac acgcacaacc agcagctctg gctcaagctt
     1681 cacagctcgt ggagcgacaa cgtgtcgagc gacatgtggc tctattcgac gcgtttcgcg
     1741 tcgtcgcgca gggagagcgt cgtcgatctc gacgagatcg tcggtgtcgt caacgac
//
LOCUS       DATCUD010000252         1814 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_87749, whole genome shotgun sequence.
ACCESSION   DATCUD010000252 DATCUD010000000
VERSION     DATCUD010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87749"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(138..1322)
                     /locus_tag="VIQ99_03680"
     CDS             complement(138..1322)
                     /locus_tag="VIQ99_03680"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEY9182274.1"
                     /translation="MTLEGLWNLSFWGYVGVTLLLTHVTIASVTIFLHRHQAHRALTL
                     HPIVSHFFRFWLWLTTGMVTREWVAVHRKHHARCETAEDPHSPQVYGIWRVLFGGVGL
                     YRTEAAKADTLENYGRGTPDDWLERHVYSQHRYTGLGIMLLIDVALFGWVALPIFAVQ
                     MVWIPFWAAGVINGVGHYWGYRNFETQDTSRNIVPLGILIGGEEFHNNHHAYGSSAKL
                     ANKWWELDIGWVYIRLLEVLGLARVKKVAPRTSFSRATTTIDIDTLRAVVTNRFHVLK
                     LYGRRVITPELTRHAEGEPSFPRRQLARVRKLMIRENSGQPEEPSTRLWLDNALEDNQ
                     TLRTVYTFMQRLKALCAQTTGKTESDLKRLQAWCAEAEASGIRALRDFARQLQAYTAQ
                     PA"
     gene            complement(1505..>1814)
                     /locus_tag="VIQ99_03685"
     CDS             complement(1505..>1814)
                     /locus_tag="VIQ99_03685"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182275.1"
                     /translation="AQAIEAIQLLIDHGLDVNAQANDGQTALHGAAMQGYDEVIRFLA
                     AKGAKLDTVDKDGFTALDVALGKAGGFGFSGQEGVVREDTAAVIRGLMAAQGLAVEAQ
                     "
BASE COUNT          297 a          585 c          586 g          346 t
ORIGIN      
        1 gcgacgagca gggcgccgca gagtagcgcg gcgccggaca cgccaacgat ctccgtcaga
       61 gacattttgc gatccccctt cgacacgctg cgccgatcta ccgtcggcta ccgctctggc
      121 agcgtgtggt gcgcgcctca agccggttgt gcagtgtacg cctgaagctg acgcgcgaag
      181 tcgcgcagcg cgcgaatccc gctcgcctcg gcttcggcgc accatgcttg cagccgcttc
      241 aggtcggact ccgtcttgcc cgtggtctgg gcgcacaacg ccttcaagcg ctgcatgaac
      301 gtatagacgg tacgcagcgt ttggttgtcc tcgagcgcgt tgtcgagcca caagcgcgtg
      361 ctcggctcct cgggctggcc gctgttctcg cgaatcatca gcttccggac gcgcgcgagc
      421 tggcggcgcg ggaagctggg ctcgccttcg gcgtgacggg tcagctccgg tgtgatcacg
      481 cgtcgtccat acagcttcag cacgtgaaaa cggttcgtga cgacggctcg cagcgtgtcg
      541 atgtcgatcg tggtcgtcgc gcgcgagaac gatgtgcgcg gcgcaacctt cttgacgcgc
      601 gcgagcccga gcacctccaa gagccgaatg tagacccagc cgatgtcgag ctcccaccac
      661 ttgttcgcga gcttcgccga cgagccgtag gcatggtggt tgttatggaa ctcttcgccg
      721 ccgatcagga tgccgagggg cacgatgttc cgcgacgtgt cctgggtttc gaaattccga
      781 tagccccagt aatgcccgac gccgttgatg acgccggcgg cccagaacgg gatccacacc
      841 atctgcacgg cgaagatcgg caacgcgacc cagccgaaca gcgcgacgtc gatcaagagc
      901 atgatgccga ggcccgtgta ccggtgctgg ctgtacacgt ggcgctcgag ccagtcgtcg
      961 ggggtgccgc gaccgtaatt ctcgagagtg tcggccttgg cggcctcggt gcggtacagc
     1021 ccgacgccgc cgaacagcac gcgccaaatg ccgtagacct gcgggctatg cgggtcctcg
     1081 gccgtttcgc agcgcgcgtg gtgcttgcgg tgcacggcga cccattcgcg tgtgaccatg
     1141 cccgtcgtga gccagagcca gaaccggaag aaatggctca cgatcgggtg cagcgtcagg
     1201 gctcgatgcg cctgatggcg gtgcaggaat atcgtgacgc tcgcgatcgt gacgtgcgtt
     1261 aggagcaggg ttacgccgac gtaaccccag aaagacagat tccacaagcc ttcgagagtc
     1321 atatatagag tcgtcccctg tgctcaaggc ctcgtcgtca gtgcagccgg ttcggattgt
     1381 ggatcgcgac ttgtcgttgt tattggcgtc gcgtctcgtt tctggcgtac ccggtttacc
     1441 ttaatgcccc cgctccgggc acggtcgcaa ctatggtggc cgttggcggc ttttgcaacc
     1501 caagtcactg cgcttcgacc gcgaggccct gtgcggccat caggccgcga atcacagcgg
     1561 ccgtgtcctc gcggaccacg ccttcttggc ccgaaaaccc gaatccgccg gctttgccca
     1621 aggccacgtc gagcgcggtg aagccgtcct tgtccactgt gtcgagcttc gcgcctttcg
     1681 cggccaggaa ccggatgacc tcgtcatagc cttgcatggc ggcgccgtgc aaggccgtct
     1741 ggccgtcgtt ggcctgcgcg ttcacgtcca ggccatggtc gatcaggagc tggatggcct
     1801 cgatcgcttg cgct
//
LOCUS       DATCUD010000253         3968 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45131, whole genome shotgun sequence.
ACCESSION   DATCUD010000253 DATCUD010000000
VERSION     DATCUD010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45131"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(173..1648)
                     /locus_tag="VIQ99_03690"
     CDS             complement(173..1648)
                     /locus_tag="VIQ99_03690"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182276.1"
                     /translation="MRVRRLGLLLALAAGSAAAQGTLVDAARSDDHDAAVALLAERAD
                     PNQAEADGTTPLHWAVHHDDADLVVRLLEAGANVAATNDYGATPMSEAAVAANVAVLE
                     ALLDAGADVDSANADGQTALMVVARSGNTAAAELLIERGANVNAREQRKGQTALMWAV
                     AQSHPAMVKLLLERGAEVDSRSTVNEWERMVTAEPRQKNLYSGGFTPLLYAARQGCLA
                     CAELLLDAGAKVDLTDPDGVTPLLSAILNAHWDTARLLLARGANVNKWDYWGRTPLYL
                     AVDFNTVPHGGRPDRPSLDDTTSLDMIDLLLAAGANPNAQLKLFPPYRSLRMDRGADA
                     ILDIGTTPLLRAARGADLAAIERLTTRGALVDLPQRDGITPLMAGVGAGARPIDTRGK
                     FRTELEALATAEALLDAGAAIEARDARGRSALHYAASVGYTDVVELLVERGADVRAVD
                     ADGLTPLDAANGKLRGGRGPGTAYPGTVEALEGLLARIAPQ"
     gene            complement(1649..2965)
                     /locus_tag="VIQ99_03695"
     CDS             complement(1649..2965)
                     /locus_tag="VIQ99_03695"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9182277.1"
                     /translation="MFITKKHLSRRTVLRGLGATVALPLLDAMIPARTALAHTAGAPT
                     PKLAFVYFPHGAIMDRWTPAAEGTSFELSPLLEPLAPFKSQLTIVSGLENKHAAGPTH
                     AITPGTWLSGVTPRISHDPYGGVTADQIAAQHIGQDTPLPSLEVATEEPVGGGACDRN
                     YGCSYGATISFRTPSTPLPMEFNPRKLFQRLFGQGDTPEEREILAAQYASILDIVADK
                     AAALQKVVGPSDRRMLNDYLESVREIERRVQKMEENDLSHLALPDAPVGIPSSFDEQM
                     NLMFDTVALSWQANLTRITSFMMAAEVSNMTYNHVDVPDAFHALSHHQNSAAKLERLE
                     RVQLYNNRAFARFVQKLKDTPDGDGSMLDHSLLVYGSNMSNSNAHDHFPLPMALVGGA
                     CGKVRGGQHLKYPDRTPVSNMLLTVLQRAGVPIESLGDSTGAFAEV"
     gene            complement(2976..>3968)
                     /locus_tag="VIQ99_03700"
     CDS             complement(2976..>3968)
                     /locus_tag="VIQ99_03700"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1588 domain-containing protein"
                     /protein_id="HEY9182278.1"
                     /translation="LAERGELDDPRAISAQVERMLADPRAAALVTNFAQQWLDIRGIR
                     DIVPDPVLFPEYNPDLGTAFARELELFLASVLLEDHSVLELLNAKHTYLNERLALHYG
                     VPAVRGDNFRRVELADQNRWGLFGKGGILMATSYPNRTAPVLRGAWILEAITGTPPAS
                     PPPNVEAFPETQAGEQPKTVRERLEMHRSNPSCNGCHGVMDPLGFALENFDAIGAWRV
                     KDREAGVTIDSSGQLADGTVVNGPVDLREALLAEPSQFVQTLTEKLMIYALGRSVEHY
                     DMPAVRRIVRDAGREDYRFSAILAGIAQSEPFRFSTTPAVDDGDAVTAQVVGRE"
BASE COUNT          612 a         1364 c         1327 g          665 t
ORIGIN      
        1 tcctcgagct cggcgacgag ctcgcggtac ttgtccttcc attgctgttc ggtcgctact
       61 tggcgcatcg ccggatccgc acgcgggtcg cggcgggtta tcggccggat gagccgtcgg
      121 cttgaggacc aaacgcgacc ggcgtcgcga aacgcgagcg cggccggagc cgctactgcg
      181 gggcaatgcg cgccagcaag ccttccaacg cctcgacggt gccgggatag gcagtgccgg
      241 gccctcttcc gccgcgcaac ttgccgttcg cggcatcgag cggcgtcaag ccatccgcat
      301 cgacggctcg cacgtccgcg ccgcgctcga cgagcagctc gaccacgtcc gtataaccca
      361 ccgacgcagc gtagtgcagc gcgctgcggc cgcgtgcgtc gcgcgcctcg atcgccgcgc
      421 cggcatcgag caaagcctcc gccgttgcca gagcctcgag ctcggtccga aacttaccgc
      481 gcgtgtcgat cggccgcgcc cccgcgccga cgccggccat cagcggcgtg atgccgtcgc
      541 gctgcggcaa gtcgaccagc gcgccgcggg tcgtcaaccg ttcgatcgcc gccaagtccg
      601 caccgcgtgc ggcgcgcagc agcggcgtcg taccgatgtc gagaatcgca tctgcgccgc
      661 gatccattcg caggcttcga taaggcggaa acagtttcag ctgcgcgttc ggattcgcgc
      721 cggccgcgag caggaggtcg atcatgtcga gtgacgtcgt gtcgtcgagc gacggccggt
      781 ccggccggcc gccgtgcggc accgtgttga agtcgaccgc gagatacagc ggcgtgcgcc
      841 cccagtagtc ccacttgttc acattcgcgc cgcgagcgag cagcagcctc gcggtatccc
      901 agtgagcgtt cagtatcgcg ctcagcaacg gcgtcacgcc gtcaggatcg gtgaggtcca
      961 ccttcgcgcc ggcgtcgagc agcagctccg cgcacgcgag gcagccttgc cgcgccgcat
     1021 acaagagcgg cgtgaagcct cccgagtaca gattcttctg acgcggctcg gccgtgacca
     1081 tccgctccca ttcgttgacc gtggatctcg agtcgacctc ggcaccacgc tccagcaaca
     1141 gcttgaccat cgcgggatga ctctgcgcga cggcccacat caacgcggtc tgacccttgc
     1201 gctgctcgcg tgcgttgaca ttcgcaccgc gctcgatcag gagctcggcc gctgcggtgt
     1261 tgccgctgcg ggcgacgacc atcagcgcgg tctggccgtc ggcgttcgcg gagtcgacgt
     1321 ccgcgcccgc atcgagcagc gcctcgagca cggcgacgtt cgcggccacg gcggcttcgg
     1381 acatcggcgt cgcgccgtag tcattcgtgg ccgcgacgtt cgcgccggct tcgagcaagc
     1441 gcacgacgag atccgcgtcg tcatgatgca cggcccagtg cagcggcgtc gtaccgtcgg
     1501 cttcggcttg gttcgggtct gcacgttcgg cgagcaacgc cacggctgcg tcgtgatcgt
     1561 cgctgcgagc cgcatcgacc agcgtcccct gcgcggcggc actgccggcc gcgagcgcga
     1621 gcaacagccc gagacggcgc acgcgcattc aaacctccgc gaacgcgccc gtgctgtcgc
     1681 cgagcgattc gatgggcacg ccggcgcgct gcagcacggt cagcagcatg ttcgagacag
     1741 gcgtgcggtc gggatacttg aggtgttgcc cgccccgcac tttgccgcag gcgccgccga
     1801 cgagcgccat cggcagcggg aaatgatcgt gcgcgttgct gttgctcatg ttgctgccgt
     1861 agacgagcag cgagtggtcg agcatcgagc cgtccccgtc gggcgtgtcc ttaagcttct
     1921 gcacgaagcg tgcgaacgcg cggttgttgt aaagctgcac gcgctcgagg cgctcgagct
     1981 tcgcggcgct gttctgatgg tgcgacagcg catggaacgc atcgggcaca tcgacgtggt
     2041 tgtaggtcat gttgctgacc tcggcggcca tcatgaacga cgtaatccgc gtgaggttcg
     2101 cctgccacga caacgcgacg gtgtcgaaca tcaagttcat ctgctcgtcg aagctcgacg
     2161 ggatgccgac cggcgcatcc ggcagggcga gatgcgagag atcgttctcc tccatcttct
     2221 gcacgcggcg ctcgatctcg cgcacgctct cgaggtagtc gttcagcatc cgccggtcgc
     2281 tgggcccaac gaccttctgg agtgccgcag ccttgtccgc gacgatgtcg aggatgctcg
     2341 cgtattgcgc cgcgagaatc tcgcgctcct ccggcgtgtc gccctggccg aacaggcgct
     2401 ggaacagctt gcgtgggttg aactccatcg gcagcggcgt gctcggcgtg cggaacgaga
     2461 tcgtcgcgcc gtagctgcag ccgtagttcc ggtcgcacgc tccgccgccg accggttcct
     2521 cggtcgcgac ctcgagcgac ggcaacggcg tgtcttggcc gatgtgctgc gcagcgatct
     2581 gatcggccgt cacgccaccg taggggtcgt gactgattcg cggcgtgacg cccgagagcc
     2641 aagtgccggg cgtgatcgcg tgcgtgggcc ccgcggcgtg cttgttctcg aggccgctca
     2701 cgatcgtgag ctggctcttg aatggcgcga gcggctcgag cagcggcgac agctcgaagc
     2761 tcgtgccttc cgctgccggt gtccagcgat ccatgatcgc gccgtgcgga aaatagacga
     2821 acgcgagctt tggcgtcggc gcaccggccg tatgtgcgag ggccgttcgc gccggaatca
     2881 tcgcgtcgag cagcggcagt gcaaccgtgg cacccaagcc gcgcaatacc gtgcgacgcg
     2941 acagatgttt cttcgtgatg aacatcgtgg ctctcctatt ccctcccgac cacctgcgcc
     3001 gtgacggcat cgccatcgtc gaccgcgggc gtcgtgctga acctgaacgg ctcgctctgc
     3061 gcgatgccgg cgagaatcgc ggagaaacga tagtcctcgc gcccggcatc gcgcacgatg
     3121 cggcgcaccg ccggcatgtc gtagtgctcc acgctgcggc ctagcgcgta gatcatgagc
     3181 ttctcggtca aggtttgcac gaattgcgac ggctccgcga gcagcgcttc acgcaaatcg
     3241 acgggcccgt tcacgacggt gccgtcggcg agctggcccg acgaatcgat cgtgacaccg
     3301 gcctcgcgat ccttgacgcg ccaggcaccg atcgcatcga aattctcgag cgcgaagccg
     3361 agcgggtcca tgaccccgtg gcagccgttg cagctcgggt tcgagcggtg catctcgagc
     3421 cgctcgcgta cggtcttcgg ctgctcgccg gcctgcgtct ccgggaacgc ctcgacgttc
     3481 ggcggtggcg acgcgggcgg cgtgcccgtg atcgcctcga gaatccaggc gccgcgcaac
     3541 acgggcgccg tgcgattcgg atacgacgtc gccatcagaa tgccgccctt gccgaacagc
     3601 ccccagcggt tctgatcggc gagctcgacc cggcggaagt tgtcgccgcg cacggccggc
     3661 acaccgtagt gcagcgcgag ccgctcgttc aaatacgtgt gcttcgcgtt caagagctcg
     3721 aggacactgt ggtcctcgag cagcacgctc gcgaggaaca actcgagctc gcgtgcgaac
     3781 gccgtgccca aatccgggtt gtactcgggg aacagtacgg ggtccggcac gatatcgcgg
     3841 atgccgcgaa tgtcgagcca ctgctgcgcg aaattcgtca ccagagccgc cgcgcgcgga
     3901 tccgcgagca tgcgctcgac ctgggccgag atcgcgcgcg ggtcgtcgag ctcgccgcgc
     3961 tccgcgag
//
LOCUS       DATCUD010000254         2135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24009, whole genome shotgun sequence.
ACCESSION   DATCUD010000254 DATCUD010000000
VERSION     DATCUD010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24009"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            298..888
                     /locus_tag="VIQ99_03705"
     CDS             298..888
                     /locus_tag="VIQ99_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9182279.1"
                     /translation="MGLSESPSLDADRALVGAVLAGDPKAFETLVRDYQRLCWHIIDR
                     MVRHPDDTRELCQDTFLRVHQYLHQYRFESPLKSWIGQVAYSVARRHLERKRIPLVHV
                     DADDEGFSLVEQVSDGFDLEEASADAELGQLLQAEIEALPPLQRTVLTLYHLDEVSIP
                     EIAQITGLNAGTIKSHLFRCRARLRDRLEKCVGVME"
     gene            885..1337
                     /locus_tag="VIQ99_03710"
     CDS             885..1337
                     /locus_tag="VIQ99_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182280.1"
                     /translation="MTTGRDIDKESELREWDAQERAVRAERLAARVGHDAAIAQYRLI
                     DRVLRNPPLSPLPRDFAAQVAARVEQNARAGSERLEVWLGRALVALLVSAGTAAVLVF
                     FGDSLRDLAENLTVPEPTAFRVQTVVGWAAAIAACVGVSAAFNPGRKR"
     gene            1362..>2135
                     /locus_tag="VIQ99_03715"
     CDS             1362..>2135
                     /locus_tag="VIQ99_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015346791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEY9182281.1"
                     /translation="MDPVAHTFAGAALAAAGLKRATPLAGAALVLGANAPDVDVFAYF
                     AGSYDAIAFRRGLTHGVLALAIWPFVLAGLLLGWDRWVRRRRDPTAAPARAGPLLALS
                     ALAVATHPALDWLNNYGMRWLMPFDGRWSYGDALFIVDPWVWLILGGAAFLTFSKSRI
                     ARVRWTVFALVASWVVVGTAEVPPLTRVLWVAGIAALLGARWWLGAASPVALERTAQG
                     ALGLTVVYIVVMVSSSAAARADVRAAVAARGITPEAVMVA"
BASE COUNT          305 a          703 c          736 g          391 t
ORIGIN      
        1 ctcctcgttc agcatcagcg agcggaccag ctcctcggag ctgttcgcgg cgatcagctt
       61 gccgcgcatc cgcgcgtcga ccaaggcttt gatcgcatag gtgacacaca ggaaaaacgt
      121 aatcgggatc aggacttcga agcgcatctt gggtttctcg catccgtccc cgggccgata
      181 tggcctgggc tcgtgacagg agatacgctc cacccggcgc cggttgcaag gccggcgccg
      241 aaaatcgttg ccgaggccct ttgcaaccgt tcgccacctg gccgtatcgc ctaccagatg
      301 ggtctatccg agtcacccag tctcgatgcc gaccgggccc tggtcggggc cgtattggct
      361 ggcgatccca aggcattcga gacgttggtc cgcgactacc agcggctctg ttggcacatt
      421 atcgatcgca tggttcggca tccggacgac actcgcgagc tctgccagga cacgttcctg
      481 cgggtccacc agtacctgca ccagtatcgg ttcgagagcc cgctgaagtc gtggatcggc
      541 caggtcgcgt actcggtcgc gcgccggcac ctcgagcgca agcggatccc gctcgtgcat
      601 gtggatgccg acgacgaagg gttcagcctg gtcgagcaag tgtcggacgg gttcgacctc
      661 gaggaagcca gcgcggatgc tgagctcggc cagctgctgc aggcggagat cgaggctttg
      721 ccgcccttgc agcggaccgt gctgacgttg tatcacttgg acgaggtgtc gatcccggag
      781 attgcgcaga tcacgggtct caatgccggc accatcaaga gccatctgtt tcgttgccgc
      841 gcgcggctgc gagaccgtct cgagaaatgc gtaggagtaa tggaatgacc acagggcggg
      901 acatcgacaa ggaaagcgag ctgcgcgaat gggacgcaca ggaacgcgca gtccgtgcgg
      961 agcgcctcgc tgcccgagtc gggcacgacg cggccatcgc gcaatacagg ctcatcgatc
     1021 gcgtgctccg caacccgccc ctgagtccgt tgccgagaga tttcgccgcg caggtcgccg
     1081 cgcgcgtcga gcagaacgcg cgtgccggca gcgagcgcct cgaggtctgg ctcggccgcg
     1141 cgctggtcgc gctgctcgtg tcggcgggga ccgcggccgt gttggtgttt ttcggcgact
     1201 ctttgcggga tctcgcggag aatctcaccg tccccgagcc cacggcattc cgcgtgcaga
     1261 ccgtcgtggg ctgggccgcc gcgatcgccg cttgcgtggg agtgtccgcg gcgttcaatc
     1321 ccggccgaaa gcgttgagct gaaggagcgg cgaccgactc gatggatccg gtcgcgcaca
     1381 cgtttgccgg cgccgcgctg gcggccgccg gcctcaagcg cgcgacgccg ctcgcgggag
     1441 ccgctttggt tctcggcgcg aacgcacccg acgtcgacgt gttcgcgtac ttcgcgggca
     1501 gctatgacgc gatcgcgttc cgcagaggcc tcacacacgg cgtgctcgcc cttgcgatct
     1561 ggcctttcgt gctcgcgggc ctgctgctcg gctgggaccg ctgggttcga cgccggcgcg
     1621 atccgacggc tgcgccggct cgcgccggac cgttgctcgc gctttcggcg ctggccgtcg
     1681 cgactcatcc cgcgctcgat tggctcaata actacggcat gcgctggctc atgccgttcg
     1741 acggccgatg gtcgtacggc gacgcgctgt tcatcgtgga tccgtgggtg tggctgatcc
     1801 tgggaggcgc cgcgtttctg acgttctcga agagtcgcat cgcgcgtgtg cgctggaccg
     1861 tgttcgcgct cgtcgcgagc tgggtcgtcg tcggtaccgc cgaggttccg ccgctcacgc
     1921 gcgtgttgtg ggtcgccggt atcgccgcgt tgctcggcgc gcgctggtgg ttaggcgccg
     1981 catcgcccgt cgcgctcgag cgcacggccc agggcgcgct gggcctgacc gtcgtgtata
     2041 tcgtcgtgat ggtgtcgtcg agcgccgcag ctcgcgccga cgttcgcgcg gcggtcgccg
     2101 cgcgcggcat cacaccggaa gccgtgatgg tcgcg
//
LOCUS       DATCUD010000255         1579 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52355, whole genome shotgun sequence.
ACCESSION   DATCUD010000255 DATCUD010000000
VERSION     DATCUD010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52355"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..637)
                     /locus_tag="VIQ99_03720"
     CDS             complement(50..637)
                     /locus_tag="VIQ99_03720"
                     /inference="COORDINATES: protein motif:HMM:NF020965.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyloxyacyl hydrolase"
                     /protein_id="HEY9182282.1"
                     /translation="MTRYERVGRRAGRAWVGSLITLSLAAACGPAVADEVIFNVGAGS
                     QPGSDQRNKTWGADYSFHRWERSDRQHIQVGVSYTSLTTNGPGHDSLVAISVYPQITL
                     YPSKTSKIMARSPAWAQPFFFVRALGPSYISENSLGTREQAEHFAFQAQVGVGVVINE
                     KGIVTFSWKHFSNAELFQPNDGIDVPFVISGGVRF"
     gene            complement(682..909)
                     /locus_tag="VIQ99_03725"
     CDS             complement(682..909)
                     /locus_tag="VIQ99_03725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182283.1"
                     /translation="MTVENLEVPPTLRQLYGYLIERGCIVQLTDINRAYLDIHSHDVL
                     RKIGRDGSEWEAMVPLEVAAAIKARGLFGYG"
     gene            968..>1579
                     /locus_tag="VIQ99_03730"
     CDS             968..>1579
                     /locus_tag="VIQ99_03730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182284.1"
                     /translation="MAHRDLHDRHGFAALDVGSGLERAQRGGCEIEVHVRDGPEAAAL
                     DEHGLLVEHLRGLQHLTGRGEHRRAREAELHEPQAHHAIVDVPKLVTRKVDQVDLDAI
                     RAQAVEQRLHETIGLGVQKAGAVDQIHADDAERLLLRCVVEIEHADVHEDAMARTAGN
                     RLELDSHPAVAFVVAAKAAGRDGVREREELRFVAAPAGQPLEVQ"
BASE COUNT          274 a          517 c          511 g          277 t
ORIGIN      
        1 cctaatcgat cgaccacggc gcggtgtcga atggcaccgc gccgtgtccc taaaagcgaa
       61 cgccgccgct gatcacgaac ggcacgtcga tgccgtcgtt cggctggaac agctcggcat
      121 tcgagaagtg cttccacgag aaggtcacga tgcccttctc gttgatgacc acaccgacgc
      181 cgacctgcgc ctggaacgcg aaatgctcgg cctgctcccg cgtccccaag ctgttctcgc
      241 tgatgtagct cggccctaac gcccggacga agaagaacgg ctgtgcccat gccggcgagc
      301 gggccatgat cttcgacgtc ttcgacggat acagcgtgat ctgcgggtag acgctgatcg
      361 cgaccaggct gtcgtggccg ggaccgttcg tggtcaggga cgtgtagctg acgccgacct
      421 ggatgtgctg ccggtcgctg cgctcccagc ggtggaagct gtagtcggcg ccccaagtct
      481 tgttgcgctg atccgagccg ggctgcgagc ccgcaccgac gttgaagatg acctcgtcgg
      541 cgacggccgg tccgcatgcc gccgcgagcg ataacgtgat cagcgagccg acccatgcgc
      601 ggccggctcg tcgccctact ctctcgtagc gtgtcaccgg cccctcgcct gccgcgcgga
      661 actgcggata ttaccgccgc gctatccgta accgaatagc ccgcgcgctt tgatcgcggc
      721 cgcgacctcg agcggcacca tcgcctccca ctcgctgccg tcgcgaccga tcttgcggag
      781 gacgtcgtgc gagtggatgt cgagatacgc gcgattgatg tcggtgagct ggacgatgca
      841 gcctcgctcg atcaggtaac cgtatagctg ccgcaacgtc ggcggcactt cgaggttttc
      901 gaccgtcatc agcctcttcg tccccggctc tttgtacggg tacacgaata gcttcagagg
      961 agcgcagatg gcgcatcgtg atctccatga tcgacacggt ttcgccgcgc tcgacgtcgg
     1021 gtccggcctc gaacgcgcgc agcgcggcgg atgcgagatc gaggttcacg tacgtgacgg
     1081 gccggaagcg gccgcgctcg acgagcacgg gcttcttgta gagcacctcc gagggctgca
     1141 gcacctgacc ggccgcggag aacatcgccg cgcccgtgag gccgagctgc acgagccgca
     1201 ggctcatcac gcgattgtcg acgtgccgaa actcgtgacc cgaaaagtcg atcaggtcga
     1261 tctcgatgcg attcgtgctc aagccgtcga gcaacgactg cacgagacga tcgggctcgg
     1321 cgtgcagaaa gcaggcgccg tagatcagat tcacgccgac gatgccgagc gcctcttgct
     1381 gcgctgcgtt gtcgagatcg agcatgcgga cgtgcacgag gatgcgatgg ctcggaccgc
     1441 cgggaatcgt ctggaactcg actcccatcc agccgtggca ttcgttgttg ccgcgaaagc
     1501 tgcgggccga gacggtgtcc gcgaacgcga agaactgcgt tttgtcgccg cgccggccgg
     1561 ccagccgctc gaggttcag
//
LOCUS       DATCUD010000256         3624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45133, whole genome shotgun sequence.
ACCESSION   DATCUD010000256 DATCUD010000000
VERSION     DATCUD010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45133"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..773)
                     /locus_tag="VIQ99_03735"
     CDS             complement(<1..773)
                     /locus_tag="VIQ99_03735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182285.1"
                     /translation="MWLGIALAASIGFVDMTHAQGRVAPAAGPPPTARAAAPIDITGH
                     WVSLITDDWVYRMITPAKGDVSYVPLNAEGRRIAETWDPARDQAAGEACKGYAAPAIM
                     RLPSRVEITWQDDNTLKLDIDTGMQTRVFHFGQREPQGARSWQGWSYATWELSGTTEQ
                     FYPGPTSLGQIKRAGSLRVDTSNLRAGYLRKNGVPFSENAFMTEYYNLLVEDDGNQYL
                     VIQTFVADPRYLTGHFVRTLQFKREPDGSKRNPVPCSAS"
     gene            complement(803..1195)
                     /locus_tag="VIQ99_03740"
     CDS             complement(803..1195)
                     /locus_tag="VIQ99_03740"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182286.1"
                     /translation="MKAKTLVLVAGVLLSGASAYAHHSFTATYDESKTIKIEGELVQF
                     MFRNPHAWVHVMAPDENGEMQRWGVEWGGAGALTGQGVTRDSLKPGDKVVITGNPGRN
                     PIDHRVRMRSLLRPSDGFGWGFQGETFD"
     gene            complement(1208..2317)
                     /locus_tag="VIQ99_03745"
     CDS             complement(1208..2317)
                     /locus_tag="VIQ99_03745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182287.1"
                     /translation="MPTTDFRATRLRALACLATALASVAVGAASPAIAQSRGAQRGGE
                     SVVDLHWWPVRKNIWMLVGAGTNIAASVGPDGVMLVNAGNAQASERVIAAIKDLQAQL
                     NAFGFLDVMTPQRGGAETRSRFPVNTHAPPKPVRFIINTSSLPHSIGGNEKIAASGVT
                     YTGGNVAGTIADSSEGATVLAHENVLNRMVGLDMPFGALPTETYFTADYKISTFFNEE
                     GVQIFHVPNASTDGDSFVFFRASDVIAAGDLFNMDSFPLIDVDSGGSINGVIAGLNAI
                     LKLAIPEFRTEGGTMVIPGHGRLGDSADVGYYRDMLTIIRDQVQASIDEGLTLEQVLE
                     KRPTFGYEARFGKDTGPWTTEMFIEAVYLSLKERS"
     gene            complement(2321..3199)
                     /locus_tag="VIQ99_03750"
     CDS             complement(2321..3199)
                     /locus_tag="VIQ99_03750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182288.1"
                     /translation="MRAHSPLVAIASFVAALGAGSGSAQMDFSGEWPVVQSQDNIDNP
                     HLGEYVGLPLSREAIRRAEVWDASIQSLPEWQCRPHSGVYIKRGPSNLRVWKEVDPAS
                     RQIIAFQTEWLRSTNTPIYMDGRPHPPEYAAHTWGGFSTGSWEGDRLRVKTTHLKEDY
                     YRRNGVPQSDLATLTEYLMRRRFDNQDYLTWVLIAYDPVYLTEPLIRSTEYRLNLAQQ
                     VPPYPCTIVTEVVRPDGYVPNWLPGKNDQIYSFSDYYGLPRSLYFDGAETMYPEYRQK
                     LERAGRTSAANAPARE"
     gene            complement(3369..>3624)
                     /locus_tag="VIQ99_03755"
     CDS             complement(3369..>3624)
                     /locus_tag="VIQ99_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182289.1"
                     /translation="VDSAMPVRRQNASISASRKSAELWLTVHAPERMAALLYFASGGN
                     HTLPSKPMQPFLPTLVARDDSGQYPTTSFTARAQDPEIAL"
BASE COUNT          603 a         1148 c         1190 g          683 t
ORIGIN      
        1 cagctagccg agcacgggac ggggttgcgt ttgctgccgt cgggctcgcg cttgaactgc
       61 agtgtgcgca cgaagtgccc ggtcaggtac cgcggatccg cgacgaaggt ctggatcacg
      121 agatattggt tgccatcgtc ctcgacgagt aagttgtagt actccgtcat gaatgcgttc
      181 tcgctgaacg gcacgccatt cttgcgcaag tacccggcac gcaggttgct cgtgtcgacg
      241 cgtaagctgc cggcgcgctt gatctggccg agcgaggtcg gtccgggata gaactgctcg
      301 gtcgtgccgg agagctccca ggtcgcgtat gaccagccct gccagctgcg tgcgccttgc
      361 ggctcgcgtt ggccgaagtg gaagacgcgc gtctgcatgc cggtgtcgat gtcgagcttc
      421 aacgtgttgt cgtcttgcca cgtgatctcg acgcggctcg gcaagcgcat gatcgcgggc
      481 gccgcatagc ctttgcacgc ttcgcccgcc gcttgatcgc gtgccgggtc ccacgtctcc
      541 gcgatccggc ggccttcggc gttcaacgga acgtaggaaa cgtcgccctt ggccggcgtg
      601 atcatccggt agacccagtc gtcggtgatc agcgagaccc aatgccccgt gatgtcgatg
      661 ggtgcagccg cgcgcgcggt gggcggtggc ccagctgcgg gcgccacgcg gccttgcgcg
      721 tgggtcatgt cgacgaagcc gatgctcgcg gcgagcgcga taccgagcca cacgacccgt
      781 gtcgagcctc cccgcatgtg cgtcagtcga acgtctcgcc ctggaagccc cagccgaagc
      841 cgtccgacgg ccgcagcaga ctgcgcatgc ggacgcgatg gtcgatgggg ttgcggcccg
      901 ggttgccggt gatcacgacc ttgtcgccgg gcttcagcga gtcacgcgtg acgccctggc
      961 ccgtgagcgc gccggcaccg ccccattcca caccccagcg ctgcatctcg ccgttctcgt
     1021 ccggcgccat cacgtgcacc cacgcgtgtg gattgcggaa catgaattgc acgagctcgc
     1081 cttcgatctt gatcgtcttg ctttcgtcgt acgtggctgt gaacgagtga tgcgcgtacg
     1141 cggatgcgcc cgacaacagc acgccggcga ctagaacgag tgttttggcc ttcacggatg
     1201 gatctcctta cgaacgctct ttcaaactta gatagacggc ctcgatgaac atttcggtcg
     1261 tccagggccc ggtgtctttg ccgaagcgcg cctcgtagcc gaacgtcggg cgcttctcga
     1321 gcacttgctc gagcgtcagc ccctcgtcga tcgaagcctg cacctggtcg cggatgatcg
     1381 tcagcatgtc gcgatagtag ccgacgtcgg ccgagtcgcc gagcctgcca tgccccggaa
     1441 tcaccatcgt gccgccttcg gtgcggaact cggggatcgc gagcttcagg atcgcgttca
     1501 agccggcgat cacgccgttg atgctgccgc ccgagtcgac gtcgatgagc gggaacgagt
     1561 ccatgttgaa caggtcgccg gctgcgatga cgtcggacgc gcggaagaac acgaagctgt
     1621 cgccgtccgt cgacgcgttc gggacatgga agatctgcac gccttcctcg ttgaagaacg
     1681 tgctgatctt gtaatccgcc gtgaaatacg tctcggtcgg cagggcgccg aacggcatgt
     1741 cgagcccgac catgcgattc agcacgtttt cgtgcgcgag caccgtggcg ccttcggacg
     1801 agtcggcgat cgtgcccgcc acgttaccgc cggtataggt cacgccgctg gccgcgatct
     1861 tttcgttgcc gccgatgctg tgcggaagcg agctcgtgtt gatgatgaag cgcacgggct
     1921 tgggcggcgc atgcgtgttc acgggaaagc gcgaacgggt ttcggcgccg ccgcgctgcg
     1981 gcgtcatcac gtcgagaaag ccgaacgcat tcagctgcgc ctgcagatcc ttgatcgccg
     2041 cgatcacgcg ctcgctggct tgcgcgttac cggcgttcac gagcatcaca ccgtccggac
     2101 cgaccgacgc agcgatgttc gtgccggcgc cgaccagcat ccagatgttc ttccggaccg
     2161 gccaccagtg aaggtctacg acgctctcgc cgcctcgctg ggcgccgcgg gattgcgcga
     2221 ttgccgggct cgccgcgccg acggcgacag aggcgagtgc ggtcgccaag caggcaagcg
     2281 cgcggagccg ggtcgccctg aagtccgtgg tcggcatcgg ctactctcgc gcgggcgcgt
     2341 tggctgcgga cgtgcgtccg gcgcgctcga gcttctgacg gtactcgggg tacatcgtct
     2401 cggcgccgtc gaaatacagc gaccggggca gcccgtagta atcggagaag ctatagatct
     2461 ggtcgttctt gccgggcagc cagttcggca cgtagccgtc gggacgaacg acttcggtca
     2521 cgatcgtgca cggatacggc ggaacctgct gtgcgaggtt caagcggtac tcggtgctgc
     2581 gaatcagcgg ctcggtcagg tagaccggat cgtaggcgat cagcacccac gtcaggtaat
     2641 cctggttgtc gaagcggcgc cgcatcaggt actcggtcag cgtggcgaga tcgctctgcg
     2701 gcacgccgtt acgccggtag tagtcttcct tcaagtgcgt cgtcttgacg cgcagccgat
     2761 cgccctccca gctgccggtc gagaacccgc cccaagtgtg cgccgcgtat tccggcgggt
     2821 gcgggcggcc gtccatatat ataggtgtgt tcgtcgagcg cagccactct gtttggaacg
     2881 cgatgatctg ccgcgacgcc ggatcgacct ctttccatac gcgcaggttc gaaggaccgc
     2941 gcttgatgta aacgcccgag tgcggccggc actgccactc cggcagcgat tgaatcgagg
     3001 cgtcccagac ctcggcgcgc cgaatcgcct cgcggctcag gggcaagccg acgtactcgc
     3061 cgagatgcgg gttgtcgatg ttgtcctgtg actgcacgac cggccactcg ccactgaaat
     3121 ccatttgcgc gctcccgctg ccggcgccga gcgccgcgac gaagctcgca atcgcgacga
     3181 gaggagagtg tgctcgcatc gattcatggt agccgtggca acacccccca gcaagcgaac
     3241 gcgcgttgcg agcgcggcgc cggaacgtgg ctgtccaaag attgcttttg agcccggcca
     3301 cgtcacccgc gttgcgattc gcgccgtgtg cgagaagtgc gccgaaatat ttttgtcgcg
     3361 ctggcgaatt agagcgcgat ttcaggatcc tgtgcgcgcg cagtaaacga cgtcgtggga
     3421 tactgcccac tatcgtcgcg agcaaccaaa gtgggcagaa atggttgcat tggtttcgaa
     3481 ggaagcgtat ggttgccgcc gctcgcaaag tacaacaaag cagccattcg ttcgggggca
     3541 tgcacggtga gccagagctc ggcggatttt ctgcttgcgg aaatcgaagc gttttgtcgc
     3601 cgcaccggca tcgcagaatc gacc
//
LOCUS       DATCUD010000257         2435 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2771, whole genome shotgun sequence.
ACCESSION   DATCUD010000257 DATCUD010000000
VERSION     DATCUD010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2435)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2435)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2435
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2771"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VIQ99_03760"
     CDS             <1..606
                     /locus_tag="VIQ99_03760"
                     /inference="COORDINATES: protein motif:HMM:NF016260.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HEY9182290.1"
                     /translation="TGTYNAYGQVLEIERGQLFFTGPLDNPGLNVRAVRDLNAASFDT
                     SVTTGPVTEVGVELTGTVQAPRTRVFSEPAMNETDALSYLLFGQPARGNGGGLDTEQA
                     STLQLAALSLGLQQALPAFQRIGTSLGLDELTVRSTTADAGEVMAGKYLSPKVYIRYS
                     YGLFNRIGGLLLRFKVNDRWSIETLSGDRESMDLLYTVEKD"
     gene            complement(668..1405)
                     /locus_tag="VIQ99_03765"
     CDS             complement(668..1405)
                     /locus_tag="VIQ99_03765"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEY9182291.1"
                     /translation="MSKHVSGTLGCVVAMAALYGLSAGPAAADVVERIARVAGTSVHY
                     KVVLPNDYDAAKQYPAILVLGGGPQTMSTIDGTLERNFRAEAERRGYLVFGPAAPDGQ
                     LFFQGGERIFPAFLDAMIATYRVAGGKFHVAGPSNGGIAALHVAAAHPDYFLSVTAFP
                     GYLWRPSDAKLLALAKLCVYLYVGEHDEYRWHDEMQREAEFLSARGAVARYTVEQGQP
                     HRLESLAGANAGRLFDGFEATSQGCSR"
     gene            1546..2262
                     /locus_tag="VIQ99_03770"
     CDS             1546..2262
                     /locus_tag="VIQ99_03770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182292.1"
                     /translation="MANHPPITLRYFDARGRAQSIRYYFRARKIQFTDERVPLSADFA
                     AWRAMRDNRALTGPFQKLPILHWGNRPVAETLMISAFVHEALGDASSLSDDDNLRHGM
                     LTSSLYQDVMAPLAILLWAEIRFPGVDLKALTKGTLERLQQHCAALEQTLIDWRWLDR
                     ARNRRVMLADCLLWEELDVARQIFGAHWSLAATPTLGKFYEEFPGRSICESLLREQPC
                     PITARPEEASVIAKIQESLA"
BASE COUNT          432 a          802 c          809 g          392 t
ORIGIN      
        1 acgggcacct ataacgcgta cggccaagtc ctcgagatcg agcgtgggca actgttcttc
       61 acaggtccgc tcgacaatcc ggggttgaac gtgcgcgccg tgcgcgacct gaatgccgcg
      121 agcttcgata cgtccgtgac cacgggcccc gtcacggagg tcggcgtgga gctcacgggc
      181 acggtccaag cgccgcggac gcgcgtgttc tcggagccgg cgatgaacga gaccgacgcg
      241 ctgtcgtatc tcttgttcgg ccagcccgcg cgcggcaacg gcggcggctt ggacacggag
      301 caggcctcga cgctgcagct cgcggcgttg tcgctgggac tgcagcaagc gctgcccgcg
      361 ttccaacgca tcggcacgtc gctgggattg gacgagctca cggtgcggag cacgacggcc
      421 gacgccggcg aggtcatggc cgggaagtat ctgagcccga aggtctacat ccgctacagc
      481 tacgggctgt tcaaccggat cggcggcctg ttgctgcggt tcaaggtcaa cgaccgctgg
      541 agcatcgaga cgctgtccgg cgatcgggag tcgatggact tgctgtatac ggtggagaag
      601 gactaatagc ctgtcagtac agggttcttc cgtcggcggc gggccttcgt tgctgcgtat
      661 agggactcta acggctgcag ccctgcgacg tggcctcgaa gccgtcgaac aatcggcctg
      721 cgttcgcgcc ggccagcgac tcgagccgat gaggctggcc ttgctcgacc gtataacgag
      781 cgaccgcgcc tcgcgcgctc aagaactcgg cctcgcgctg catctcgtcg tgccagcggt
      841 actcgtcgtg ctcgccgacg tagagataca cgcagagctt cgcgagcgcg agcagcttcg
      901 catcgctggg ccgccagaga tatcccggga acgccgtgac cgacaggaaa tagtcgggat
      961 gggccgctgc gacatgcagc gcggcgatgc cgccgttcga cggtcccgcg acgtggaact
     1021 tgcctccggc gacgcggtag gtcgcgatca tcgcgtcgag aaacgcgggg aagatccgct
     1081 cgccgccctg gaagaacagc tggccgtcgg gtgccgcggg accgaacacg agatagccac
     1141 ggcgctccgc ttcggcgcgg aaattgcgct cgagcgtacc gtcgatcgtg ctcatggtct
     1201 gagggccgcc gcccaggacg aggatcgcgg gatactgctt cgcggcgtcg tagtcgttcg
     1261 gcagcaccac cttgtaatgc acggacgtac cggcgacccg ggcgatccgc tcgacgacgt
     1321 cggccgcggc cgggccggcc gacaatccgt agagcgccgc catggcgacg acgcagccca
     1381 aggtccccga gacgtgcttg ctcactgcgt cactcctcga ctggctgcgg ccactttccg
     1441 gcatcggacc cggatttgcc agcgcctatc gcgtgcgccc cgttccgaaa accccatccg
     1501 ccgtggcatg ctggcggccg catcaggccc ggaaacaagc tcccaatggc gaatcatcca
     1561 ccgatcacac tgcgttattt cgacgctcgc ggacgcgcgc aatcgatccg ttactacttc
     1621 agagcccgca agatccaatt cacggacgag cgcgtgccgt tgagcgcgga cttcgccgcg
     1681 tggcgagcca tgcgcgacaa ccgcgcgctg acgggtccgt tccagaagct cccgatcctg
     1741 cactggggaa accggcccgt cgcggagacg ctgatgatct cggccttcgt gcacgaggcg
     1801 ctgggcgacg cctcatcgtt gtccgacgac gacaatttga ggcacggaat gctgacgtcg
     1861 agcctgtatc aagatgtgat ggcgccgctc gcgatactgc tctgggccga gatccgattt
     1921 cccggtgtcg atctcaaagc gttgacgaag ggcacgctcg agcggctgca gcagcactgc
     1981 gccgccctcg agcaaacact aatcgactgg cggtggctcg atcgcgcgcg gaaccggcgc
     2041 gtgatgctgg ccgactgtct gctctgggag gagctcgacg tcgcgcggca gatcttcggc
     2101 gcgcactggt cgttggccgc aacgccgacg ctcggcaagt tctacgagga attcccaggc
     2161 cgctcgatct gcgaaagcct gcttcgcgag cagccgtgcc cgatcacggc gcggccggag
     2221 gaagcatccg tcatcgccaa gatccaagaa tcgctggcct gaccgccggc ggcgagtcgg
     2281 cagggggggc ccatgcaaaa gatcgcgtac ccgaaagagc agatgcaccg catcgcgtac
     2341 acgaagctca cgcccgagca agtcggcgcg aagcttgcgg cagccgccgg gccgacgagc
     2401 gcatcgccgc tgtccgatgc gttcgtcgga aaaac
//
LOCUS       DATCUD010000258         1892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31064, whole genome shotgun sequence.
ACCESSION   DATCUD010000258 DATCUD010000000
VERSION     DATCUD010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31064"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1057
                     /locus_tag="VIQ99_03775"
     CDS             <1..1057
                     /locus_tag="VIQ99_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182293.1"
                     /translation="GSFGGVYAETPDRIWIAMRGELPLPEGAAPWTPYVALNPSRGNA
                     TGNGDGITATCGEEPKRGWERRWEHSIIVVDGDGDLVDEWPHLDPMFSQLPCGRGPHQ
                     IKISPYDAEKHVWIIDDQLHMIYRFTYDGKLTMSKGELGVRGRGPNTFDRPTDIAWLP
                     DGTYFITDGYGGTRVAKFDKDGKFIKDWGGPPKDPANPGPNEFNTVHSIAISADRRLF
                     VVDRGHERMQVFDTDGNFLDLWPLRSPHWPASQRTLVTNHFIDDKGFIWAGDAFTNRF
                     LKFDLDGNFLYSWGAPGGQPGRLGCSHGITTDQLGNLYLADCFAGRVQKFAPIEGADP
                     DKIAGQILRTWDTWTAN"
     gene            1141..>1892
                     /locus_tag="VIQ99_03780"
     CDS             1141..>1892
                     /locus_tag="VIQ99_03780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182294.1"
                     /translation="MPNRLLAAVGDDIPPEGIGQGIRHVSYSDQGGRPDGVQVMVHRG
                     HLYVGHMFSDGVTVLDARDPRALKPVHYFTTAPNTRTHHLQVAEGLMLLANGANIVRM
                     QSYDNERDYFENTLADSLTNRQPFRAGLSIFDIDTNPAEPREIGFLPMPGIGVNRLWW
                     AGGRYAYVSAHFDGFTDHILAIVDLADVTKPEIVSRWWLPGMHRAGGETPTAPQGRRY
                     ALHHMIVAGNRGYAAWRDGGLTIHDVSDAASP"
BASE COUNT          339 a          630 c          622 g          301 t
ORIGIN      
        1 gggctctttc ggcggcgtct acgccgagac tccggaccgc atctggatcg cgatgcgcgg
       61 cgagctgccg ctgcccgagg gcgccgcacc gtggactccg tatgtagcgc tgaatccatc
      121 gcgcggcaat gcgaccggca atggcgacgg cattacggcg acctgcgggg aggagcccaa
      181 gcgcggctgg gagcggcgct gggaacactc gatcatcgtc gtcgacggcg acggcgatct
      241 cgtcgacgag tggccgcacc tcgacccgat gttcagccag ctgccgtgcg gtcgcggtcc
      301 gcatcagatc aagatcagcc catacgacgc cgagaagcac gtctggatca tcgacgacca
      361 gctgcacatg atttatcggt tcacgtacga cggtaagctc acgatgagca agggcgagct
      421 cggcgtgcga ggccgaggac cgaacacgtt cgaccggccg accgacatcg cgtggttgcc
      481 cgacggcacg tacttcatca cggacggcta cggcggcacg cgcgtggcga agttcgacaa
      541 ggacggcaag ttcatcaagg actggggcgg cccgccgaaa gatccggcaa acccaggacc
      601 gaacgagttc aataccgtgc acagcatcgc gatcagcgcc gaccggcgct tgttcgtcgt
      661 cgatcgcggc cacgagcgca tgcaggtctt cgataccgac ggcaacttcc tcgacctgtg
      721 gccgttgcgg tcgccgcact ggcccgcgag ccagcgcacg ctcgtcacga atcatttcat
      781 cgacgacaag ggcttcatct gggccggcga tgcattcacg aatcgcttct tgaagttcga
      841 tctcgacggc aatttcctct acagctgggg cgccccgggc ggccaaccgg ggcggctcgg
      901 ctgctcgcac ggcatcacga ccgatcagct cggtaatttg tacctggccg actgcttcgc
      961 tgggcgcgtg cagaagttcg cgccgatcga aggtgccgat cccgacaaga tcgcggggca
     1021 gatcttgcgg acgtgggata cgtggacggc gaactgaccg tgccaccgcg aggcggcacg
     1081 cgcgcgcata cgcgccgcgc ctgtctcgcg gcattggcgg gctcggccgt cggcgtcgcg
     1141 ctgccgaatc ggctgctcgc ggccgtcggc gacgacatcc cgcccgaagg catcggccaa
     1201 ggaattcgcc atgtttcgta cagcgatcag ggcggacggc ccgacggcgt gcaggtcatg
     1261 gtacatcgcg gccacctgta cgtcggccac atgttcagcg acggcgtgac ggtgctcgat
     1321 gctcgcgatc cgcgtgctct gaaacccgtt cactatttca cgacggcccc gaacacgcgc
     1381 acgcatcacc tccaagtcgc cgaagggctg atgctgctcg cgaacggcgc gaacatcgtg
     1441 cgcatgcagt cgtacgacaa cgagcgcgac tacttcgaga atacgctcgc cgattcactg
     1501 acgaatcgac agccgttccg cgcggggctc tcgattttcg atatcgacac gaatccggcc
     1561 gagccccgcg agatcggctt cctgccgatg cccgggatcg gcgtgaatcg tctgtggtgg
     1621 gccggtggca ggtacgcgta cgtgtcggcg cacttcgacg gcttcacgga ccacatcctc
     1681 gcgatcgtcg atctcgccga cgtcacgaag ccggaaatcg tgtcgcgttg gtggctgccg
     1741 ggcatgcacc gcgccggcgg cgagacgccg accgcgccgc agggcagacg ctacgcgctg
     1801 caccacatga tcgtcgcggg gaaccgcggc tacgcggcgt ggcgcgacgg cgggctcacg
     1861 atccacgacg tcagcgacgc cgcgagcccg aa
//
LOCUS       DATCUD010000259         2714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_87833, whole genome shotgun sequence.
ACCESSION   DATCUD010000259 DATCUD010000000
VERSION     DATCUD010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2714
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87833"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            315..1394
                     /locus_tag="VIQ99_03785"
     CDS             315..1394
                     /locus_tag="VIQ99_03785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011682046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 family protein"
                     /protein_id="HEY9182295.1"
                     /translation="MRRVFLDGNRLRGLGARALAAIGASIALLLGAQTVWAQTSGGLL
                     IPHATWACGMPEGIPSPEAGRLVFEIEISLERAVDIGRTPYGARRVAVGLEGTVEGPR
                     LSGAVAAGALDLELSLANGVIEIEQALVLQASDGSFIYARNAGTGPSAGDVRVVLDFE
                     APNESEHAWLNTGKFVARRELSAAQKSLHLRVYDVSSVAVGSGGNGGISITKPADAAA
                     QPWGYRVKDASEQQGEILITENVTLSPSQRVGPSKRGDRNIIPITGGTVSGRIVGKVL
                     MGGADYQILTPPASIDAHYLWETDDGELIIVRNGGGFGGLVPRFETRVDGPYAYLNTG
                     SYLSSNPGMGQGGVALTFYESVKPR"
     gene            complement(1401..1814)
                     /locus_tag="VIQ99_03790"
     CDS             complement(1401..1814)
                     /locus_tag="VIQ99_03790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007224574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182296.1"
                     /translation="MKIGGVAAWITIVGASLTYAWSAGAHHAFSTEFDANQPITLKGT
                     ITRVEWINPHAWIHLDVPRDGGVVEKWMIEAGSPNTLVRRGMTRDSIPPGTEVVVFGY
                     RHRNGSNAANGRDVTLPDGRRLFITSPGTGAPGSE"
     gene            complement(1811..>2714)
                     /locus_tag="VIQ99_03795"
     CDS             complement(1811..>2714)
                     /locus_tag="VIQ99_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182297.1"
                     /translation="PRTPWGDPDLQGKWSNATLTPLQRPAELGDKELFTEDEATAYVR
                     QRIAAQSGDANIESDRAAGNVGSYNDAWMDRGNDIVPTRRTSLIVEPANGRVPPFTAA
                     AQQQHERNLAYAAAHPADTPEDRYLTERCIGFGGGHAPMLPEPYNNNYYIVQTPEYVT
                     IMAELNHEVRIIPIDGRPHLPAGVRQWTGDSRGRFEGDTLVVETTNQIPHRHYYGVQM
                     LNSVMSDEFRVVEQYTRTGPDQIRYRATVHDPVFTAPWTVEIFLHPQPGDLVEFACHE
                     GNYGMRGILSAMREEERRAQEGSR"
BASE COUNT          447 a          841 c          932 g          494 t
ORIGIN      
        1 agccgccggg cgcagcggcg agtgtggcct cgggacgcgg ttgcggcgga ttgccgaggg
       61 gcccctgcgc cagcgctgcg ccggctatca cgctcagacc gagcgtcacg gcaccgttcg
      121 atagcgcccg aaaagcaacg atcgacatgg ctcttcccct aaagtcttgt cgtgtatcca
      181 tcgtagcaac gtcggtgtcc gcagtcgcgc agcagtcccg aaaagtgccg aaaatgactg
      241 aaagaactcg cgacccgagg aaagggccgg gtgcgtgcgc tactctcgtc gctctcgcga
      301 tattggggga tcgcatgcgt cgcgtgtttt tggatggaaa tcggctgaga gggctcggcg
      361 cccgagctct tgcggccatt ggcgcttcga tcgcgctgct gctgggcgcg caaacggtgt
      421 gggcgcagac ctcgggaggg ctgttgatcc ctcacgcgac atgggcctgc ggtatgccgg
      481 agggcatccc gagcccggaa gcggggaggc tggtgttcga gatcgaaatc tctctcgagc
      541 gcgccgtcga catcggccgg acaccgtatg gagcgagacg cgtagccgta ggactcgaag
      601 ggaccgtcga gggaccgcgg ttgtccggcg cagtggcggc cggtgcgctc gacctcgagc
      661 tgtcgctcgc gaacggtgtc atcgagatcg agcaagctct cgtgctccag gcgtcggacg
      721 ggagcttcat ctacgcacgc aacgcgggca cgggcccgag tgccggcgac gtcagagtcg
      781 tgctggattt cgaagccccg aacgagagtg agcacgcgtg gttgaacacc ggcaagttcg
      841 tcgctcgccg cgagttgagt gccgcacaga agtcgctgca tctgcgggtc tacgacgtgt
      901 cgagcgtcgc tgtcggctcg ggcggcaacg gcggcatttc gattaccaag cccgccgacg
      961 ccgcggccca accttggggg tatcgcgtca aggacgcgag cgagcagcaa ggcgaaatct
     1021 tgatcacgga gaacgtcacg ctctccccgt cgcagagagt cggtccgagt aaacgcggcg
     1081 atcgcaacat cattccgatc acgggcggca ccgtgagtgg ccgcatcgta ggcaaggtgc
     1141 tgatgggcgg ggccgactat cagattctca cgccgcccgc gtcgatcgat gcgcattact
     1201 tgtgggagac ggacgacggc gagctgatca tcgtgcgcaa tggcggcggt ttcggcgggc
     1261 tcgtgccgag gttcgaaacg cgggttgacg gcccttatgc ctacctcaac acgggctcgt
     1321 atctgagctc gaaccctgga atggggcagg gcggggtcgc gctcacgttc tacgagagcg
     1381 tgaagccgcg ttagccgcgg ctactcgctc ccgggtgccc cggtgcccgg cgacgtgatg
     1441 aacagccggc ggccatccgg gagagtcaca tcgcggccgt tggcggcatt cgagccgttg
     1501 cggtggcgat agccgaagac gacgacctct gtgccgggcg ggatcgagtc gcgcgtcatg
     1561 ccgcgacgca cgagcgtgtt ggggctgccg gcctcgatca tccacttttc gacgacgccg
     1621 ccatcgcgtg ggacgtccag gtggatccag gcatgcggat tgatccattc cacgcgcgtg
     1681 atcgtgccct tcagcgtgat cggctggttc gcatcgaact cggtcgagaa cgcatggtgc
     1741 gcgccggcag accaagcgta tgtgagtgac gcgccgacga tcgtgatcca cgcagcaaca
     1801 ccaccgatct tcatcgactg ccctcctgtg ctcgtcgctc ttcctcacgc atagccgaca
     1861 gtatgccgcg catgccgtag ttgccttcgt gacaggcaaa ctcgacgagg tctcccggct
     1921 gaggatgcag gaaaatctcg accgtccacg gcgcggtgaa caccgggtcg tgcacggtgg
     1981 cgcgatagcg aatctgatcg gggccggtcc tggtgtattg ctcgacgacg cggaactcgt
     2041 cgctcatcac cgaattcagc atttgcacgc cgtagtagtg ccgatgcggt atctggttgg
     2101 tcgtttcgac gaccaacgtg tcgccctcga agcggccgcg cgaatcgccg gtccactggc
     2161 gcacgccggc cggtaagtgg ggacgaccgt cgatcggaat gattcggacc tcgtggttca
     2221 gctccgccat gatcgtgacg tactcgggtg tctgcacgat gtagtagtta ttgttgtaag
     2281 gctccggcag catcggcgcg tggcctccgc cgaacccgat gcagcgctcg gtgaggtaac
     2341 gatcctcggg cgtgtcggca gggtgcgccg ctgcataggc caggttccgc tcgtgctgtt
     2401 gttgcgcagc agccgtgaac ggcggaacgc gcccgttcgc gggctcgacg atcagcgacg
     2461 tgcgccgcgt cggcacgatg tcgttgccgc gatccatcca agcgtcgttg taggacccga
     2521 cgttgcctgc ggccctgtcc gactcgatgt tcgcgtcgcc gctctgcgcc gcgatgcgct
     2581 ggcgcacgta ggccgttgcc tcgtcttccg tgaagagctc tttgtcgccg agctcggcgg
     2641 ggcgctgcag cggcgtcagc gtcgcgttgg accacttgcc ttgcaagtcg ggatcgcccc
     2701 acggcgtgcg cggc
//
LOCUS       DATCUD010000260         2167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_101984, whole genome shotgun sequence.
ACCESSION   DATCUD010000260 DATCUD010000000
VERSION     DATCUD010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101984"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..1559
                     /locus_tag="VIQ99_03800"
     CDS             135..1559
                     /locus_tag="VIQ99_03800"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR02095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004373 - glycogen (starch) synthase
                     activity [Evidence IEA];
                     GO_function: GO:0009011 - starch synthase activity
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase"
                     /protein_id="HEY9182298.1"
                     /translation="MRILTVCAEFAPWAKTGGLADAVAGLCDALCAAGHDVRVLLPRY
                     AHLAPPRGPRHVVDGLGGPFLLGELEPEPEADAARPRRTTPRVFLLELGDLVADTIYT
                     GDARDAGRFLRLASAAVAASTAADWRPDLLHCHDWHAALAPVLQRLAPQSRAPSVLTL
                     HNVGYQGVFADSVLEEHGFAALRSVLPADPHASGTISFLRAGLLAADRVTTVSPTYAE
                     EIRRPEFGMGLEDVLAARGNDLVGILNGVDYSVWSPDHDPFLVQRYDATDLRPKRHIK
                     QTLLERLRLAPAADAPLVGVVSRLVEQKGIDLLTAALPTLIADTPAAFALLGSGDAVL
                     AAELRRLSAAHPTRLSFTEGYDEKLAHEILAGSDLTVVPSRYEPCGLTQMYALRYGTI
                     PVVRSTGGLADTIRHFDTATGLGNGSVFRDADPQGVLWGVRTALQWFADAAVWPRLVR
                     NAMAADFSWRSQVPHYEELYRSLL"
     gene            complement(1556..>2167)
                     /locus_tag="VIQ99_03805"
     CDS             complement(1556..>2167)
                     /locus_tag="VIQ99_03805"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011813907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEY9182299.1"
                     /translation="IDHFRALESYWEVPAGAPTARTGQWRRGRGDALLTALREKLGGV
                     PLVAEDLGIITDEVRALRDRFHLPGMVVLQFAFDGSADNPHLPQHHRQNAVVYTGTHD
                     NDTTVGWYASLDSRTRDAVHRVLGVGAAPPVPEFLIDAAYASKAALAIVPMQDLLGLD
                     SGARMNKPGTLVGNWRWRFEWAQVPASLGVVCRERAQHTGRAR"
BASE COUNT          324 a          771 c          738 g          334 t
ORIGIN      
        1 ggccgttttc cggaaagccc agcgtagaat tctccaacca gtggaggccc catgacgaag
       61 caggcgaccg tcacgtccga gaaccgcacc attgcattcc ccgccgcggg ttccggggca
      121 gcgccagcag cgcgatgagg attctgacgg tctgcgcgga attcgccccc tgggcgaaaa
      181 ccggcggact cgcggatgcg gtcgcgggcc tctgcgacgc gctgtgcgcc gcgggccacg
      241 acgtacgcgt gttgctgccg cgttatgctc acctcgcccc gccccgcggc ccgcggcatg
      301 tcgtcgacgg cctcggcgga ccgttcctgc tcggtgagct cgagcccgag ccggaagcgg
      361 acgccgcaag gccgcgtcgc accaccccaa gggtcttcct gctcgagctc ggcgacctcg
      421 tcgcggatac gatctacacg ggcgatgcgc gcgacgcggg acggttcctg cgcctcgcgt
      481 cggcggccgt cgccgcgagc acagcagccg actggcgccc ggacctgctg cactgccacg
      541 actggcacgc ggcactggcg ccggtgttgc agcgcctcgc gccgcaaagc cgcgcgccgt
      601 ccgtcctgac gctgcacaac gtcggctatc aaggcgtgtt cgcggactcg gtcctcgagg
      661 agcacgggtt tgctgcgcta aggtcggtac tgcccgccga cccgcacgcc agcggtacga
      721 tcagcttctt gcgcgcgggg ctgctcgccg ccgatcgcgt cacgacggtg agccccacct
      781 acgccgaaga gattcggcgg cccgagttcg gcatgggcct cgaggatgtc ctggccgccc
      841 gcggcaacga cctcgtcggg atcttgaacg gcgtcgacta cagcgtgtgg tcgcccgacc
      901 acgacccgtt cctcgtgcag cgctacgatg ccacggacct ccgaccaaag cggcacatca
      961 agcagacgct gctcgagcgt ctgcgtctcg cacctgccgc cgacgcaccg ctggtcggcg
     1021 tcgtcagccg tctcgtggag cagaagggca tcgacctctt gacggccgcg ttaccgacgt
     1081 tgatcgcgga cacgcccgcc gcgttcgcgc tgctcgggag cggcgacgcg gtgctggccg
     1141 cggagctacg ccggctgtcc gcggcgcatc cgacgcgcct gtcgttcacg gaaggctacg
     1201 atgaaaagct cgcgcacgag atactcgccg gctccgattt gaccgtcgtg ccgtcacgct
     1261 acgagccgtg cgggctcacg cagatgtatg cgcttcgcta cgggacgatt cccgtcgtgc
     1321 ggtcgacggg cggccttgcc gacacgattc gtcatttcga cacagcgacg ggtctgggca
     1381 acggcagcgt gtttcgcgac gcggacccgc agggcgtgct gtggggggtg cgcacggcgc
     1441 tgcagtggtt cgccgatgcc gcggtctggc cgcgcctggt ccgaaatgcg atggcggccg
     1501 acttctcctg gcgaagccaa gtcccacact acgaggagct gtatcgctcg ttgctctaac
     1561 gggctcgacc ggtgtgctgc gcgcgctcgc ggcacacgac cccgagcgat gccggaacct
     1621 gggcccactc gaaccgccac cgccagttgc cgaccagcgt ccccggcttg ttcattcgcg
     1681 cgccggagtc gagccccagg aggtcctgca tcgggacgat cgcgagcgcg gccttcgagg
     1741 cataggcggc atcgatcagg aactcgggca cgggcggcgc ggccccgacg ccgagcacgc
     1801 ggtgaacggc gtcgcgtgtg cgcgagtcga gcgacgcgta ccagccgacg gtcgtgtcgt
     1861 tgtcatgggt cccggtgtaa acgaccgcgt tctggcgatg gtgctgcggc agatgcggat
     1921 tgtcggcgct accgtcgaac gcgaactgca acacgaccat gcccggcaga tggaatcgat
     1981 cgcggagcgc gcggacctcg tccgtgatga tcccgagatc ttccgccacg agcggcacgc
     2041 cgccgagctt ctcgcgcagt gccgtgagca gcgcgtcgcc gcggccgcgc cgccactgac
     2101 ccgtccgggc cgtcggcgcg ccggccggga cctcccaata cgattccagc gcacggaaat
     2161 gatcgat
//
LOCUS       DATCUD010000261         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59304, whole genome shotgun sequence.
ACCESSION   DATCUD010000261 DATCUD010000000
VERSION     DATCUD010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59304"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            231..671
                     /locus_tag="VIQ99_03810"
     CDS             231..671
                     /locus_tag="VIQ99_03810"
                     /inference="COORDINATES: protein motif:HMM:NF019339.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182300.1"
                     /translation="MKLTQKKAESRSLLGVENEYLAAGAEALFAKQYDEGIRLTKLGL
                     ERPTSRHDRADALSNLCAAHAAKREPAIAIDYCTQSLEIETENWRAYSNRAYAYYLSL
                     RFQEADDDLDRALALNPSARQMPQIRGMLNERRLRGRITIEEHN"
     gene            complement(699..>1700)
                     /locus_tag="VIQ99_03815"
     CDS             complement(699..>1700)
                     /locus_tag="VIQ99_03815"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9182301.1"
                     /translation="FQMFPTVYEIPFHYPHPVTGRATSTRAPNPAPTSNAAMTHRPAV
                     DLGMPPELATELRAIGARIEAQKTGELYAPLHPKEPYPWLALSRDLKYGPHERNVLDV
                     FTSPDPGRGKPVVVFVHGGGFARGSKHTEGTPFYDNIGLWAVGRDMVGVTLNYRLSPE
                     STWPSGIEDLTAAVAWLKSNIARYGGDPDKIVLWGHSAGAAHVADYVASAAKRGADAG
                     LAGAVLTSGFYDLGTEVSVWKVYYGEDVSTYAERSSLPGLVATAVPLFVNDAELDPDM
                     FREESDKLIAARAAAAKPVESLHLKGHSHLSETYAVGTGDRSLSGPVLEFVRRVTGP"
BASE COUNT          293 a          560 c          565 g          282 t
ORIGIN      
        1 cctctcgtta gagcgacctc tcaggcgttg gcatcggcaa cgatgccagc gcctttttct
       61 tggtagcggt cgcgcccatg ctagggcgca actccaagcg tcgcgttgtt ccgatcgacc
      121 agcgggacta tactcagtcc gaagcggagc acgcgatgat aggtcgattg ctactcgttt
      181 tggtgtcgtg cctggcggtc ggcgccgcgc tcgggcagcg agggcgcgag gtgaagctga
      241 ctcagaagaa agccgagagc cgcagcctcc tcggcgtcga gaacgagtat cttgcggccg
      301 gagccgaagc tctcttcgcg aagcagtatg acgagggcat ccgcctcacc aagctggggc
      361 tcgagcgacc cacgtcacgg cacgatcgtg ccgacgccct ctccaatctt tgcgcggctc
      421 atgccgccaa gcgcgagccc gccatcgcca tcgactactg cacgcagtcg ctcgagatcg
      481 agaccgagaa ttggcgtgca tacagcaatc gggcctacgc gtactacttg agcctgagat
      541 tccaggaggc agacgacgat ctcgacagag cgctcgcgtt gaatccgtct gcgcggcaga
      601 tgccccagat tcgcggcatg ttgaacgagc gccgtctgcg gggacgcatc acgatagaag
      661 agcataatta gacaggctca ccccctaccc gatccgctct aagggccggt cacacggcgc
      721 acgaactcga gcacggggcc cgacagcgag cgatcgccgg tgccgacggc ataggtctcc
      781 gagaggtgcg agtggccctt caagtggagg ctctcgacgg gcttagcagc cgcggcgcgc
      841 gccgcgatga gcttgtcgga ttcctcgcgg aacatgtccg ggtcgagctc ggcgtcgttc
      901 acgaacaacg gcacggcggt cgcgacgagc cccggcagcg acgagcgctc ggcgtaggtc
      961 gacacgtcct cgccgtagta gaccttccac accgacacct cggtgccgag atcgtagaaa
     1021 cccgacgtca gcacggcgcc ggctaggccg gcatcggcgc cccgcttcgc cgcgctggcg
     1081 acgtagtcgg cgacgtgcgc ggcgccggcc gagtggcccc acagcacgat cttgtcggga
     1141 tcgccgccgt aacgcgcgat gttcgatttc agccacgcga cggccgcggt caggtcctcg
     1201 atgccggacg gccacgtgct ctccggcgac agccggtaat tcagcgtcac gccgaccatg
     1261 tcgcggccga cggcccagag cccgatgttg tcgtagaacg gcgtgccctc ggtgtgcttc
     1321 gagccgcgcg cgaaccctcc gccgtgcacg aacacgacga cgggcttgcc gcggccggga
     1381 tccggtgacg tgaacacgtc gagcacgttg cgctcgtgtg ggccgtactt caggtcgcgt
     1441 gacagcgcga gccacggata cggctccttt ggatgcagcg gcgcgtacag ctcgccggtc
     1501 ttctgcgcct cgatgcgcgc cccgatggcc ctgagctcgg ttgcgagctc gggcggcatc
     1561 cccaaatcga ctgcgggccg gtgtgtcatc gctgcattgc tcgtcggcgc cggattcggg
     1621 gcgcgagtgc tggtcgctcg cccggtcacg ggatgcgggt agtggaacgg aatctcgtaa
     1681 acggtcggga acatctggaa
//
LOCUS       DATCUD010000262         2169 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_95054, whole genome shotgun sequence.
ACCESSION   DATCUD010000262 DATCUD010000000
VERSION     DATCUD010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2169)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2169)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2169
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95054"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(24..1235)
                     /locus_tag="VIQ99_03820"
     CDS             complement(24..1235)
                     /locus_tag="VIQ99_03820"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015894945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9182302.1"
                     /translation="MNSTAKSIRAGLVASATLALCAAVLAQPPGPAGENFKVVTVAEG
                     LKNPWSMAWLPNGDMLVTERGGTLRIIRGGKLLPDPVPGVPAVRAQGQGGLQEVAVHP
                     NFAQNRFIYLSYAKPRNDGMEGTTALTRARFENDRLVDAKEIFEAKAWNNAPGHFGAR
                     IAFDGQGHLFMSVGDRMAGLFPRTADGGMDPNLEGHPAQRLDNHQGKILRLNEDGTVP
                     SDNPFVGRAGALPEIWSYGHRNPQGLAYDAASGRLWETEHGPQGGDELNVIEKGKNYG
                     WPVIGYGANYTLGTEIHASRNKEGMEQPKAFFVPSIGISGLMLYTGDRFPNWKGNAFV
                     GGMAGNYRQLVRFSLNGAIVTNRQPLLVGEYRIRDVRQGPDGLVYIAVDNQFPGQPSN
                     IIRLEPAPAAQ"
     gene            1432..>2169
                     /locus_tag="VIQ99_03825"
     CDS             1432..>2169
                     /locus_tag="VIQ99_03825"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182303.1"
                     /translation="MSSRRAFLRAAGGGLVGLGALGAFGAYGQPAPKRVVVGGRRMSI
                     VDVHAHCLFPEVARRVPGVNVPRAVPPSLVLGPERLAAMDERGIDVQALSVNTYWWYS
                     ASRDDARAVVAIHDEGIAAWCKQHPTRFVGLSSVALQFPDLAAEQLEHAVRNLGARGA
                     SIGGHVANEPPTGEKYDPFWAKAEELDVPVFMHPNNALNIARDGALDGRGSLGNIVGN
                     PPETTVFLSRMIFDGTLDRFPRLTLCAA"
BASE COUNT          311 a          721 c          754 g          383 t
ORIGIN      
        1 cgcgacgacc ttgagccaac ggctcattga gccgcgggag cgggctcgag ccggatgatg
       61 ttgctgggtt gacccgggaa ctggttgtcg accgcgatgt agacgagccc gtccggaccc
      121 tggcgaacgt cgcggatccg gtactcgccg accaggagcg gctggcgatt cgtgacgatc
      181 gcgccattca acgagaaccg gacgagctgc cggtagttgc cggccatgcc gccgacgaac
      241 gcgttgccct tccagttcgg gaaccggtcg cccgtgtaca gcatgaggcc cgagatgccg
      301 atcgacggca cgaagaaagc cttcggctgt tccatgcctt ccttgttgcg gcttgcgtgg
      361 atctcggtgc cgagcgtgta gttcgcgccg tagccgatca cgggccagcc gtagttcttg
      421 cccttctcga tcacgttcag ctcgtcgccg ccctgcgggc cgtgctcggt ctcccagagc
      481 ctgcccgacg cggcgtcgta cgcgaggcct tgcggattgc ggtggccgta gctccagatc
      541 tccggcagcg cgccggcgcg gcccacgaac gggttgtcgc tcggcaccgt gccgtcttcg
      601 ttcaagcgca ggatcttgcc ctggtggttg tcgagccgct gcgccgggtg gccctcgaga
      661 ttcggatcca tgccgccgtc cgcagtgcgc gggaacaagc ccgccatgcg gtcaccgacc
      721 gacatgaaga ggtggccttg gccgtcgaac gcgatgcgcg cgccgaagtg acccggagcg
      781 ttgttccacg ccttcgcttc gaagatctct ttagcatcga cgagccggtc gttctcgaac
      841 ctcgcgcgcg tcagcgcggt cgtgccttcc atgccgtcgt tgcgcggctt cgcgtagctc
      901 aagtagatga agcggttctg cgcgaagttc gggtgcacgg cgacctcttg caggccgcct
      961 tggccttgcg cgcgcacggc cgggacgccc ggaacggggt ccggcagcag cttgccgccg
     1021 cggatgatcc gcagcgtgcc gccacgctcg gtcacgagca tgtcgccgtt cggcagccac
     1081 gccatgctcc acgggttctt gaggccttcg gcgaccgtga cgactttgaa gttctcgccg
     1141 gccgggccgg gcggttgcgc caacacggca gcgcagagcg cgagagtcgc gctcgcgacg
     1201 agccccgcac gaatggattt cgctgttgaa ttcatggtgg ttcctcaata atgagcgccg
     1261 cggcgccgca gttcgttctt gtccgcccgg acgggcgtcg gccgctatct tagcgcgaac
     1321 cctcgcgcgg ctgcgaccct gatccggcgc gaagaaatct cgacgttggc cgcgattgac
     1381 gcgccccgag cggttcggcg aggcttgacc catctggggt ggggggaagc catgagcagt
     1441 cgcagagcct ttttgcgcgc cgccggcggc ggcctcgttg ggttgggggc gctcggggcg
     1501 ttcggcgcct acgggcagcc ggcgccgaag cgcgtcgtgg tcggcggccg gcgaatgtcg
     1561 atcgtcgacg tccatgccca ttgcctgttt cccgaggttg cacgccgagt gccgggcgtc
     1621 aacgtgccgc gcgcggtgcc gccatcgctg gtgctcggtc ccgagcgact cgcggcgatg
     1681 gacgagcgcg gcatcgacgt ccaggcgctc agcgtcaaca cgtattggtg gtattcggcg
     1741 agccgcgacg acgcgcgcgc cgtcgtggcg attcacgacg aaggcatcgc cgcgtggtgc
     1801 aagcagcatc cgacgcggtt cgtgggcttg agctcggtcg cgctgcagtt cccggatctc
     1861 gcggccgagc agctcgagca tgcggtcagg aatctcggcg ctcgcggcgc ctcgatcggc
     1921 gggcacgtcg cgaacgagcc gccgaccggc gagaagtacg atccattttg ggcgaaggcc
     1981 gaagagctcg acgtgccggt cttcatgcat ccgaacaacg cgctgaacat cgcgcgcgac
     2041 ggcgcgctcg acggccgcgg aagcctgggc aacatcgtcg gcaatccgcc cgagaccacg
     2101 gtgttcttga gccgcatgat cttcgacggc acgttggatc gcttcccgcg cctcacgctg
     2161 tgcgcggcg
//
LOCUS       DATCUD010000263         2940 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102000, whole genome shotgun sequence.
ACCESSION   DATCUD010000263 DATCUD010000000
VERSION     DATCUD010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102000"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(114..1316)
                     /locus_tag="VIQ99_03830"
     CDS             complement(114..1316)
                     /locus_tag="VIQ99_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015047760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182304.1"
                     /translation="MSSRMHMTPTFAHFRSHTWIWRIFVALALILSGVSIALAGPREQ
                     AARIHDRLAGVPADETTLDQMQAVLPGNPTAAANIAMNNPSFYAVTLKNFAAPWTNRD
                     QNAFVPLNDYVTLVMGMVRDNVPFNQILSGNLLYTAPGVSPAPTATSNAHYEALENRM
                     REPAFNQSELAQTTQTAIYGTPDAATAGAITTRAASEAFFIAGTNRAMFRFTLMNHMC
                     MDMEQVLDTSIAPDRIRQDVSRSPGGDSRVFMNNCIGCHAGMDPLAQAFAYYTFDDTA
                     QRMIYSPGTVHPKYFNNDTTFPDGFVTPDDSWHNHWRQGQNALIGWSQALPGQGNGAK
                     SLGIELASTDAFAQCQVQKVFKAVCLRDAVDQSDRDQVSAMTTTFRNNNFNLKQVFAE
                     SAGYCMGN"
     gene            1816..>2940
                     /locus_tag="VIQ99_03835"
     CDS             1816..>2940
                     /locus_tag="VIQ99_03835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182305.1"
                     /translation="MSHETRSLCRAGLFHSRLALLALAIAAIAACTGDGDGSVGVGTG
                     QDPDPVAPDFPIAYTKGPLFDADDVLQTNTDLRDILRFAVGTDLYLRDRASPTAPERN
                     ITARFTQGTGDVMGVEISSDGRKVLFAMRGPVDAGLALDDPDQPSWNIWEYVIATDTL
                     RRLIVSDLTAQQGHDISPHYLSDGRIIFASTRQQTAKAILLNDGKPQFDARDEDRDEP
                     AFVLHVMRDDGRDEFKQVSFNQSSDYEPTMLDNGKVLFSRWDHAGSVNGIHLYTMNPD
                     GTELELYYGAESHLTGTNNGAVQFVSAREMQDGRVMAILRPFDHPELGGAITIIDTPT
                     YVENTQAVASSAGMTGPAQTAATPNQVRTDLEPSPGGRFSS"
BASE COUNT          546 a          893 c          957 g          544 t
ORIGIN      
        1 ccggcgccga gcagagcgcg gacgcccgcg cggcgatgcg cggcgtcagt ggcaggcgac
       61 tcgacaagat tcacggttgc gtactgcatc gtcctcactc cctggcgcat gggctagttg
      121 cccatgcagt acccggccga ctcggcaaag acctgtttca gattgaagtt gttgttgcgg
      181 aacgtggtcg tcatcgccga aacctggtcg cggtcgcttt ggtccacggc gtcgcgcaag
      241 cacaccgcct tgaagacttt ctgcacctgg cactgcgcga acgcatccgt gctcgcgagc
      301 tctatgccga gcgacttcgc gccgttaccc tggcccggca atgcctggct ccagccgatc
      361 aacgcgtttt gtccttggcg ccagtggttg tgccacgagt cgtcgggcgt cacgaaaccg
      421 tccgggaagg tcgtgtcgtt gttgaagtac ttgggatgca ccgtgcccgg cgagtagatc
      481 atccgctggg ccgtgtcgtc gaaggtgtag tacgcaaagg cttgcgcgag cgggtccatg
      541 ccggcgtgac agccgatgca gttgttcatg aacacgcggc tatcgccgcc ggggctgcgc
      601 gacacgtctt gccggatgcg atccggtgcg atcgaggtgt cgagtacctg ctccatgtcc
      661 atgcacatgt ggttcatcag cgtgaagcgg aacatcgcgc ggttcgtgcc cgcgatgaag
      721 aacgcctcgg atgcggcgcg cgtcgtgatt gcgccggcgg tcgcggcgtc cggcgtcccg
      781 tagatcgcag tctgcgtcgt ttgggcaagc tcgctctgat tgaaggcagg ctcgcgcatc
      841 cggttctcga gcgcctcgta atgcgcgttg ctcgtcgccg tgggcgccgg cgaaacaccc
      901 ggagccgtgt acagcaggtt accggaaaga atctgattga acggcacgtt atcgcgaacc
      961 atgcccatca cgagcgtgac gtagtcgttc agcggcacga acgcgttttg gtcgcggttc
     1021 gtccagggcg ccgcgaagtt cttcagcgtc accgcgtaga agctcggatt gttcattgcg
     1081 atgttcgccg cggccgttgg gttgccgggc agcaccgctt gcatctggtc caaggtcgtc
     1141 tcgtcggccg gcacgcctgc gagacgatcg tggatgcggg ccgcctgctc ccgcggtccc
     1201 gcgagcgcga tcgatacgcc actcaggatc agagcgagcg caacgaagat tcgccatatc
     1261 caggtatggc tgcggaagtg cgcgaacgtc ggcgtcatgt gcatcctgct actcatcgcg
     1321 atcgtccaaa ttggttgatg gtccaccccg aaagtgagcg cactagacca caaaaaaaaa
     1381 tactgcgtaa tgtgggaaat cacagacgtc tcaaaacagc gacggttcgg tgcgaaccga
     1441 gtcgccgtgt aagctcctcg cgttgctcga acgcacctat tcacgagtga ccgagctctc
     1501 agatggtcct taagtgaaat ctcgtgcgtc ggtgcgcgag tgacgtgtga cgacatggag
     1561 acgtcgttca cactttgttc ggcgaggtga accggaagag ttctgtgatc acgttaacgg
     1621 aaggcgtgga tgtcgatgct catgattgcg aggcgccgac attacgtcgc atcgcgatgc
     1681 gatgggtcgc gggattatgc cagcacgaat cgcagcaaaa agtgctcgat gtgcggcagt
     1741 ggagttgacc gttgacggac agagcagagc ttggaaggac cctctggcaa gccaggtaat
     1801 ggagagggat tttccatgag ccacgaaaca cgaagtcttt gccgggccgg ccttttccac
     1861 agccgcttgg ccttgcttgc gctcgcgatt gcggcgatcg cggcctgcac cggcgacggc
     1921 gacggcagcg tcggtgtcgg tacgggtcag gatcccgatc ctgtcgcgcc cgacttcccg
     1981 atcgcttaca cgaagggccc gctgttcgac gcggacgacg tgctccagac gaacacggat
     2041 ctacgagaca tcctgcgttt cgcggtaggc acggacctct acctgcgcga tcgagcctca
     2101 ccgacggcgc cggagcgcaa catcacggcc cggttcacgc aagggaccgg cgacgtgatg
     2161 ggcgtcgaga tctcgagcga cggccggaaa gtgctgttcg cgatgcgcgg cccggtcgac
     2221 gcgggcctcg ccctcgacga tccggatcag ccgagctgga acatctggga gtacgtgatc
     2281 gcgacggaca cgctgcggcg actcatcgtg tcggacctca cggctcagca aggccacgac
     2341 atttcgccgc actatttgtc ggacggccgc atcatcttcg cttcgacgcg tcagcagacg
     2401 gcgaaggcca ttctcctcaa cgacggcaag ccgcaattcg acgcgcgcga cgaggatcgc
     2461 gacgagccgg cgttcgttct gcacgtaatg cgcgacgacg gccgcgacga gttcaagcag
     2521 gtgtcgttca atcagagcag cgactacgag ccgacgatgc tcgacaacgg caaggtgctg
     2581 ttcagccgtt gggaccacgc cggcagcgtg aacggcatcc atctctatac gatgaatccc
     2641 gacggcacgg agctcgagct ctactacggc gccgagagcc atttgacggg cacgaacaac
     2701 ggcgcggtgc agttcgtcag cgcgcgcgag atgcaggacg ggcgcgtgat ggcgatcttg
     2761 cggccgttcg atcatcccga gctcgggggc gcgatcacga tcatcgatac gccgacctac
     2821 gtagagaata cgcaggccgt cgcgagctcg gccggcatga ccgggcccgc acagacggct
     2881 gcgacgccga accaggttcg cacggacctt gagccgtcgc cgggcgggcg gttcagctcg
//
LOCUS       DATCUD010000264         2225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_2808, whole genome shotgun sequence.
ACCESSION   DATCUD010000264 DATCUD010000000
VERSION     DATCUD010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2808"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..465)
                     /locus_tag="VIQ99_03840"
     CDS             complement(<1..465)
                     /locus_tag="VIQ99_03840"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /protein_id="HEY9182306.1"
                     /translation="MPTIKDVSIIDSNTAEAKRVESGLERTICSPSLCGSKNLTVYRR
                     TIQKGRQFTVDAGKSYHIVYVMRGSSSGRVQFKDETHAAEEGAGVLLTPGETARFDAA
                     GADLELLHTVTPSPPPAVEGELPGGPGYFFDRKTLRALTDASGGRVRRFCAES"
     gene            complement(485..1789)
                     /locus_tag="VIQ99_03845"
     CDS             complement(485..1789)
                     /locus_tag="VIQ99_03845"
                     /EC_number="1.13.11.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007863799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gallate dioxygenase"
                     /protein_id="HEY9182307.1"
                     /translation="MATIVGGIAASHTPSIAFAIDTQKPDDPVWAPVFEGFAPVRKWL
                     EKKKPDVLFWAYNDHVTSFFFDHYSNFALGFSDTFAVADEGGGPRPLPAIKGHPALAK
                     HIANALVADEFDLSFFQAKGLDHGVFSPLSAMMPHEHGWPAAIVPLQVGVLQFPIPTA
                     RRCFALGRSLRKAILSFPEDIKVAIVGSGGLSHQVSGERAGFNNTEWDMEFLDLLEKD
                     PEKLTELSIADYAKRGGIEGAEVIMWLIMRGALTPKVRKVHQSYAIPTMTATSTVIYE
                     DLPDTDEKKSVEAYAAQARREYAGVAELEGSYPFTLDRSSKAYRLNKYLHGIIQPELR
                     GRFLYDREGSYVRGELNEEEKDMLRRLDWAALIKYGVIFFILEKLGAAVGSTNQHIYA
                     AMRGESLEAFQKTRKNAVLYSVAGTHKAQAAQDSATKSRPKK"
     gene            complement(1836..>2225)
                     /locus_tag="VIQ99_03850"
     CDS             complement(1836..>2225)
                     /locus_tag="VIQ99_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182308.1"
                     /translation="GASSDRRNERFLHIAIPSAIGALGFLASAYFSSPLPGMIALAVA
                     AVGDLGTRGPFWALPTRFLTGSAAAAGIALINTMASLGGFVGPSMVGFVLEWTGSFAG
                     GLVFLAVLLLLAAGAALALRHARVLAD"
BASE COUNT          378 a          705 c          729 g          413 t
ORIGIN      
        1 cgactcggcg cagaagcggc gcacacggcc gccgctggcg tcggtcagcg cacgcagcgt
       61 cttgcggtcg aagaaatacc cgggcccgcc cggtagctcg ccttcgaccg cgggcggcgg
      121 cgatggcgtg accgtatgca agagctcgag atccgccccc gcagcgtcga atcgagccgt
      181 ctcgccgggg gtgagcagca cgcccgcgcc ttcctcggct gcgtgtgtct cgtccttgaa
      241 ctgcacgcgc ccgctcgacg agccgcgcat gacgtaaacg atgtggtagc tcttgcccgc
      301 gtcgacggtg aactgccggc ccttttggat cgttcgcctg tagacggtca ggttcttcga
      361 gccgcacaag ctcgggctgc aaatcgtgcg ctccaacccg gactcgacgc gtttggcctc
      421 ggcggtgttc gagtcgatga tcgaaacgtc cttgatggtc ggcatttgcc ttgctcctcg
      481 agggctattt ttttggacga ctcttggtcg ccgagtcctg cgcggcctgg gctttgtgcg
      541 tgccggccac ggagtagagc accgcgttct tgcgggtctt ctggaacgcc tcgagcgatt
      601 caccgcgcat cgcggcatag atgtgctgat tcgtcgagcc gaccgcggcg ccgagcttct
      661 cgagaatgaa gaagatgacg ccgtacttga tcaaggcggc ccaatcgagc cgtctcagca
      721 tgtctttctc ttcctcgttc agctcgcctc tgacgtacga gccttcgcga tcgtagagga
      781 accgcccacg gagctcgggc tgaatgatgc cgtggagata tttgttgagg cgatatgcct
      841 tgctgctgcg gtcgagcgtg aatgggtacg agccttcgag ctcggcgacg ccggcatact
      901 cgcggcgagc ctgcgctgcg taagcctcga cgctcttttt ttcgtcggtg tccgggaggt
      961 cttcgtagat gacggtcgac gtggcggtca tcgtcggaat tgcatacgac tgatgcacct
     1021 tccgcacttt cggcgtcagc gcgccgcgca tgatgagcca catgatcacc tcggcgcctt
     1081 cgatgccgcc gcgcttcgca tagtcggcaa tcgaaagctc ggtcagcttc tcgggatcct
     1141 tttcgaggag atcgagaaac tccatgtccc attccgtgtt gttgaagccg gcgcgttcgc
     1201 cgctgacctg atgcgacagc ccgccggagc ccacgatcgc aaccttgatg tcctccggaa
     1261 agctcaagat cgccttgcgc agcgagcgcc cgagcgcgaa gcaacgtcgc gcagtcggga
     1321 tgggaaactg cagcacgccg acctgcaacg gtacgattgc cgcgggccag ccgtgctcgt
     1381 gcggcatcat cgcggacagc ggcgagaaga cgccgtggtc gaggcctttc gcctggaaga
     1441 acgagaggtc gaactcgtcc gcgacgagcg cgttcgcgat gtgcttcgcg agtgccgggt
     1501 gccccttgat ggccggaagg ggtctcggcc cgccgccttc gtcggcgacg gcgaacgtat
     1561 ccgagaaacc cagcgcgaaa ttcgagtagt gatcgaagaa gaacgacgtt acgtgatcgt
     1621 tgtaggccca gaagagcacg tccggctttt tcttctcgag ccacttgcgc accggcgcga
     1681 agccctcgaa taccggagcc cagacggggt cgtctggttt ttgcgtgtcg atcgcgaagg
     1741 cgatcgatgg ggtgtgggat gcggcgattc cgccgactat cgtggccaaa tccttagctc
     1801 cgttccgatc gagacagtga ttatacccgt ggcggtcagt cggcgagcac gcgcgcgtgg
     1861 cgcagcgcga gcgcggcgcc ggccgcgagc agcagcagca ccgcgaggaa cacgagaccg
     1921 cccgcgaagc tgcctgtcca ttcgagcacg aagcccacca tcgatgggcc gacgaacccg
     1981 ccgagcgatg ccatcgtgtt gatcagtgcg atgccggcgg ctgccgcgct gcccgtcagg
     2041 aaccgtgtcg gcaacgccca gaacgggccg cgcgtaccga ggtcgccgac ggctgcaacg
     2101 gccagcgcga tcattccggg caacggcgac gagaaatacg cgctcgcgag gaagccgagc
     2161 gcgccgatcg cgctcgggat cgcgatgtgc aggaaccgct cgttgcgtct gtccgagctg
     2221 gcgcc
//
LOCUS       DATCUD010000265         2021 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31127, whole genome shotgun sequence.
ACCESSION   DATCUD010000265 DATCUD010000000
VERSION     DATCUD010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31127"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..533)
                     /locus_tag="VIQ99_03855"
     CDS             complement(<1..533)
                     /locus_tag="VIQ99_03855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KUP/HAK/KT family potassium transporter"
                     /protein_id="HEY9182309.1"
                     /translation="MNEQRSLGRATLGALGVVYGDIGTSPLYALKETIAITGSDAAAV
                     LGVLSLIFWSLLSVVTLKYVVVTLRSDNAGEGGTLSLLALVQQKFGTSGVWAGRFVAL
                     AALGTAMFYCEALITPAITVLSAVEGVVLLDPRFESVVLPVTIGIIVALFALQRRGTA
                     RVGGLFGPIMVLWFGTLA"
     gene            complement(607..1452)
                     /locus_tag="VIQ99_03860"
     CDS             complement(607..1452)
                     /locus_tag="VIQ99_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012366964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY9182310.1"
                     /translation="MKKWNLIVDVAKCTNCNCCTLANQDEHVGNEFPGYSAPMPKHGS
                     RWIDIRTRERGSGPVMDVAYLPVLCQHCDDAPCIKAATNGAVTKRADGIVHIDPVKAK
                     GQKAIADACPYGAVRWNEELALPQHWFFDAHLLDRGWKEPRCAQVCATGAMKAVKVTD
                     EEMAAIKAQEGLSELQPEAATKPRVHYKNLDRYTHEFIGGTVIKTVNGVTDCVADAKI
                     RLESSGAVVGEAVSDAYGEFKIEGLKPDSGRYRVVIEVGGREAKRLDVELRKSVYVGR
                     IELGS"
     gene            complement(1481..>2021)
                     /locus_tag="VIQ99_03865"
     CDS             complement(1481..>2021)
                     /locus_tag="VIQ99_03865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005031368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY9182311.1"
                     /translation="DRPPIAKYQRPAEFPNGKGFEDFPLQLISPHPRFSFHTQMDGKD
                     SFLNDIPDHRVLVDGYYYWVMRIHPDDAKARGIRDNDLVRLYNERGAVICAAKLTHRM
                     LKGVVHSYASSGVYDPVGEPGKSADRGGCVNLLSSKKSQISKGHSMGASCCLIEVERW
                     NAGEAALPAQEEKRKAVAA"
BASE COUNT          350 a          666 c          628 g          377 t
ORIGIN      
        1 gccaacgtcc cgaaccacag caccatgatt gggccgaata ggccgccgac gcgcgcggtc
       61 ccgcggcgct gcaacgcgaa caacgcgacg atgatgccga tcgtcacggg tagcacgacg
      121 ctctcgaatc gcggatcgag caacacgacg ccctcgacgg ccgagagcac cgtgatcgcc
      181 ggcgtgatca gcgcctcgca atagaacatt gccgtgccga gcgcggcgag cgcgacgaag
      241 cgtccggccc acaccccgga ggttccgaac ttctgttgca cgagtgcgag cagcgacagc
      301 gtgccgccct cgccggcatt gtccgagcgc aacgtcacga cgacgtactt cagcgtgacg
      361 accgatagca ggctccagaa gatcaacgac agaacgccga gcacggccgc ggcatcgctg
      421 cccgtgatcg cgatcgtttc cttcagcgca tacagcgggc tcgtgccgat gtcgccatac
      481 acgacgccga gcgcgccgag ggtggcgcgg ccgagagagc gttgttcgtt catacgagga
      541 agcgctgccg aagcggctcc ggctacgaaa ggcggtgctc ggcgatcagg tggagcttca
      601 tcgacgtcag gagccgagct cgattctgcc gacgtagacg ctcttcctga gctcgacgtc
      661 gagccgcttc gcttcccggc caccgacctc gatgacgacg cgatagcgcc cgctgtcggg
      721 tttgagccct tcgatcttga actcgccgta ggcgtccgaa accgcttcgc cgacgacggc
      781 tccggagctc tcgagcctga tctttgcgtc ggcgacgcag tcggtcacgc cattgacggt
      841 tttgatgacc gtgccgccga tgaactcgtg ggtgtagcga tcgagattct tgtagtggac
      901 acgcggcttg gtcgccgctt ccggctgcag ctcgctcaag ccctcctgtg ccttgatcgc
      961 ggccatctcc tcgtccgtga ctttgacggc cttcatggcc cccgtcgcgc acacctgggc
     1021 gcaacgcggt tccttccaac cacggtcgag caaatgcgcg tcgaagaacc agtgctgcgg
     1081 aagcgcaagc tcctcgttcc aacgcacggc gccgtacgga cacgcgtcgg caatggcctt
     1141 ctggcctttg gccttgacgg gatcgatgtg cacgatgccg tcggcgcgct tcgtaaccgc
     1201 gccgttcgtg gctgccttga tacacggcgc gtcgtcgcag tgctggcaca gcacgggcag
     1261 ataggccacg tccatgacgg gacccgaacc gcgctcgcgg gttcgaatgt cgatccacct
     1321 tgacccatgc ttcggcatcg gcgcggaata gcccgggaac tcgttgccca cgtgctcgtc
     1381 ctgattggcc agcgtgcagc aattgcaatt cgtgcacttc gcgacgtcga cgatcaaatt
     1441 ccacttcttc atgcgttcaa cctgggtccg ttcgccgtgc tcatgcggcc acggctttgc
     1501 gtttttcttc ttgcgccggc aacgcggcct cgccagcgtt ccatcgctcg acctcgatga
     1561 ggcagcagct cgcgcccatc gagtgccctt tgctgatttg cgacttcttc gaggacaaca
     1621 ggttcacgca gccgccgcgg tcggccgact tgccgggctc gccgacggga tcgtagacgc
     1681 ccgaggaggc gtaggagtgc acgacgccct tcagcatgcg gtgcgtgagc ttcgcagcgc
     1741 aaatgacggc gccgcgctcg ttgtacaagc gcacgagatc gttgtcgcgg atgccgcgcg
     1801 ccttcgcgtc gtcgggatgg atgcgcatga cccaatagta gtagccgtcg acgagcacgc
     1861 gatggtccgg gatgtcgttc aggaagctgt ccttgccgtc catctgcgtg tggaacgaga
     1921 accgcggatg cggcgagatc agctgcaatg gaaaatcttc gaaccctttg ccgttcggaa
     1981 attccgccgg acgttgatac ttcgctatcg gcggccggtc t
//
LOCUS       DATCUD010000266         2228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73767, whole genome shotgun sequence.
ACCESSION   DATCUD010000266 DATCUD010000000
VERSION     DATCUD010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73767"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1032)
                     /locus_tag="VIQ99_03870"
     CDS             complement(<1..1032)
                     /locus_tag="VIQ99_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEY9182312.1"
                     /translation="MRILTARLVLVLAGLWSRGPALAEPFTVVVLPDTQNYVDFTKQK
                     SAGFALDGSEVYLEHMQHIASKGVANGGDVVFVAAVGDVWQHLSRDDDPEHERRGILS
                     IGAGPTALITPDQTLNFEIPLAVRGYRLLAAAGIPFGVPPGNHDYDAWWTAPVAGTVP
                     SDADAATLAAVPQENRQIHIGGLEAFKRAFGSDSEFFRGKSWYVSALEGGTSSAQIFE
                     AGGYRFLHLAFEMQAGDQVLEWAERVLDEHPGLPTIVSTHDYLNPRGERAPSSMDLAR
                     VDPGYNNDAETIWRKFVSRNDQIFMVLCGHQPGQALRVDRNESGHAVYQMLADYQDRG
                     QASIDAGQAN"
     gene            complement(1058..1666)
                     /locus_tag="VIQ99_03875"
     CDS             complement(1058..1666)
                     /locus_tag="VIQ99_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011686550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEY9182313.1"
                     /translation="MRITICTLAATGLLASLPVVAQAPPAAGAAPPAPAMVLTVQGFP
                     DGGEIPVKFSQAAPGAAPGEGTSPAMTWTNVPAGTQSFVLNMRDLDVARNRTTEDQAH
                     WVVWNIPATATGMTEGQPRGAQLPDGSFQISATGQVYRGPGAPANGPRHHYMFELYAL
                     DTKLDVQPTADAFETRTKVFEAMQGHVLGKAVYGGLFRRPAQ"
     gene            complement(1681..>2228)
                     /locus_tag="VIQ99_03880"
     CDS             complement(1681..>2228)
                     /locus_tag="VIQ99_03880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182314.1"
                     /translation="RAVAFKNFHIHLDSSLADVAVTGNGKVTGRVGSKRFRFDHVIAA
                     TGYRIDLAAQPELARIHESIALWGDRFTPGPGEDSEAGASHPYLGSGFEFLPRNGANA
                     PYLRNVHCFNLAGALSFGIPVGDVPSVVDQPRLIGAIARDLYVEGVDVAQHERFINAP
                     LTAPSSVPYERAVTTRAKEVA"
BASE COUNT          345 a          746 c          747 g          390 t
ORIGIN      
        1 gttcgcctgt cccgcgtcga tgctggcctg gccgcgatcc tggtagtcgg ccagcatctg
       61 atacacggcg tggcccgact cgttgcggtc gacgcgcaac gcttggccgg gctgatgccc
      121 gcacagcacc atgaagatct ggtcgttgcg gctcacgaac ttgcgccaga tcgtctccgc
      181 gtcgttgttg tagccagggt ccacccgagc gaggtccatg ctgctcggcg cccgctcgcc
      241 gcgcgggttc agatagtcgt gcgtcgagac gatcgtcggg agcccggggt gctcgtcgag
      301 cacacgctcc gcccactcca gcacctggtc gccggcctgc atctcgaacg cgaggtgcag
      361 gaagcggtag ccgccggcct cgaagatctg cgcgctgctc gtgccacctt ccaacgcgct
      421 gacgtaccag cttttcccgc gaaagaactc actgtcgctg ccgaatgcgc gtttgaaggc
      481 ttccagaccg ccgatgtgaa tctgccggtt ttcctgtggc accgcagcga gcgtcgcggc
      541 atcggcgtcg cttggcaccg tgcccgcgac gggcgccgtc caccaagcat cgtagtcgtg
      601 attgcccggc ggcacgccga atggaatgcc ggcggccgct agcaggcggt agccgcgaac
      661 cgcgagcgga atctcgaagt tcagcgtctg gtccggcgtg atcagcgcgg ttggcccggc
      721 gccgatcgaa aggatgccgc gtcgctcgtg ctccgggtcg tcatcgcgcg acaagtgttg
      781 ccaaacgtca ccgacagcgg caacgaatac cacgtcgccg ccgttcgcga cacccttgct
      841 cgcgatgtgt tgcatgtgct ccaagtagac ctcgctgcca tcgagcgcga agcccgcgga
      901 cttctgctta gtgaagtcca cgtagttctg ggtgtcgggc agcaccacga ccgtgaacgg
      961 ctcggcgagt gccggtcctc gcgaccagag tcccgcgaga acgaggacga gacgcgccgt
     1021 caggattcgc atgtcgtgcc gcgctacggc aacgccgcta ctgcgccggc cgccggaaca
     1081 acccgccgta cacggccttg ccgagcacgt gcccttgcat cgcctcgaac accttcgtgc
     1141 gcgtctcgaa cgcgtcggcc gtcggctgca cgtcgagctt ggtgtcgagc gcgtagagct
     1201 cgaacatgta gtggtgccgc ggcccattgg ccggcgcgcc gggtccgcgg tacacctggc
     1261 cggtcgcgct gatctggaaa ctgccgtccg gcaattgcgc gccgcgcggt tgaccttcgg
     1321 tcatgccggt cgcggtcgcc gggatgttcc acacgaccca atgtgcttga tcctcggtcg
     1381 tgcgattgcg ggcgacgtcg aggtcacgca tgttcaacac gaacgattgc gtgccggccg
     1441 gaacgttggt ccaggtcatc gcgggcgatg tgccttcgcc gggcgccgca ccgggcgccg
     1501 cttggctgaa cttcacgggg atctcgccgc cgtcggggaa gccttgcacc gtgagcacca
     1561 tggccggtgc cggcggcgcc gcgcccgcgg cgggcggcgc ctgcgctacg acgggcagag
     1621 aggccaagag tccggtcgct gcgagcgtgc agatcgtgat tcgcatcgag agtctcctca
     1681 ttaagcgact tctttcgcgc gcgtcgtgac cgcgcgttcg tacggcaccg agctcggcgc
     1741 ggtcagcggc gcgttgatga agcgctcgtg ctgcgcgaca tcgacgcctt cgacgtacag
     1801 atcgcgcgcg atcgcgccga tcaaccgtgg ctgatcgacg acgctcggca cgtcgccgac
     1861 cggaatgccg aagctgagcg ctcccgcgag gttgaagcag tggacgttgc gcaggtacgg
     1921 cgcgttcgcg ccattgcggg gcaagaactc gaatcccgag ccgagatacg gatggctcgc
     1981 gccggcttcg ctgtcttcac cggggccggg cgtgaagcga tcgccccaca acgcgatgga
     2041 ctcgtgaatg cgtgcgagct ccggttgcgc ggccaaatcg atccgatagc ccgtcgccgc
     2101 gatcacgtga tcgaagcgga agcgcttgct gccgacgcgt cccgtaacct tgccgttgcc
     2161 cgttacggcg acgtccgcga gcgagctgtc gagatggata tggaagttct tgaacgccac
     2221 ggcgcgtt
//
LOCUS       DATCUD010000267         4024 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_38148, whole genome shotgun sequence.
ACCESSION   DATCUD010000267 DATCUD010000000
VERSION     DATCUD010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38148"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VIQ99_03885"
     CDS             complement(<1..246)
                     /locus_tag="VIQ99_03885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182315.1"
                     /translation="MRLFNPLIVLMLIPFLAAGPAAAQSASALFAEGNSLARSGVYRT
                     ALLRYREAAAAGLDSPLLHYNVGVVYYKLGEFADAAAE"
     gene            complement(344..796)
                     /locus_tag="VIQ99_03890"
     CDS             complement(344..796)
                     /locus_tag="VIQ99_03890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182316.1"
                     /translation="MTQPPDAQAAEHRKPTRGQRAIAFGFIGAFALTMLTVILTGLYV
                     RSPRTRAPETEVVTLTIGEPRSINLVFDSRAALPDVEFTVDLPIGIELADHPGQRRVV
                     GRAELSSGSSALPLTLVAREGPGGQLAARLRSGDEQKTFVVDVAVAAR"
     gene            844..2091
                     /locus_tag="VIQ99_03895"
     CDS             844..2091
                     /locus_tag="VIQ99_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside transporter C-terminal
                     domain-containing protein"
                     /protein_id="HEY9182317.1"
                     /translation="MNALQSALGLAVMTATAWAISENRRAVTWRVPTVGIAMQLVVAW
                     LLLELPPVRASFGVLNDAVLALQTASEAGTSFVFGYLGGAPLPFETLPETSSVVLAFR
                     AFPLVLVVSALTALLTYWRILPVVVRALSAIFERSFGIGGAVALSTAANIFVGMVEAP
                     LFIRSYLRQLSRGELYMVMCTGMASIAGTVLFLYVTLLGSVIEDAAGQLITASIMSAP
                     ASIMFAWLMVPLDGKRTGAALTLGPGAPTSAMDAITQGTERGLALLLNILAMLVVLVA
                     LVALANSLLGLLPDVYGAELTLERVLGWMMAPVVWLIGVPWSEAPTAGALMGIKTVLN
                     ELLAYVRLAELEDDLSERTRLLMTYALCGMANFGSVGIMIGGLTAMAPERRPEIVALG
                     LKSIVGGTLATLSTGAVVGIITA"
     gene            2150..2953
                     /locus_tag="VIQ99_03900"
     CDS             2150..2953
                     /locus_tag="VIQ99_03900"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY9182318.1"
                     /translation="MRKLAAIAATALAVWSAPSMARELQDVLNTGTLRVGITLYAPWA
                     MRGNDGELVGFEVDVARQLAADLGVKVELLPYDVERLVPALESNEIDVIAAGLTITPE
                     RALHVNFSAPYAESGMTLATHSQSTAQVSDITALDSEEFTIAAVEGSVAVELAARLWP
                     RAKIAVLDSVDTATEAVLTGKVHGYLEDEPVPTFLALANPDVIDVPTARPLLASRAGF
                     AVNKGDPDFLAFLNAWIEARDADTWLPTTHNYWFKSLRWQERLRDATRR"
     gene            2937..3401
                     /locus_tag="VIQ99_03905"
     CDS             2937..3401
                     /locus_tag="VIQ99_03905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182319.1"
                     /translation="MRHAVDRARTALTLLFAALAAPLAAQDAEVPRAPRIIGAPAATA
                     PSPAASPPPPGISIVMRPPTAARLAPLPEDRDDGPEEIIVVGRGWRLPDLGSEWRARQ
                     EEQARSDRLNATLLPLYNPDKPPPHETTFLSPEQRRHGYIELFRVRFGRPRD"
     gene            3499..>4024
                     /locus_tag="VIQ99_03910"
     CDS             3499..>4024
                     /locus_tag="VIQ99_03910"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182320.1"
                     /translation="MNGAILLIHDEQALRSSARETLSSAGHEVAEAADLATGARIAER
                     VRPALILLPWLGRRPVREALTQLRTSDATRRTRLMVWAEQSDIGNAVTALEFGADDLL
                     ALPFDSAELVARVNACLRRPLAMTRPDRLTAGPLVLDKAVHQLTVRGEEVALSPAEFR
                     LLAFLLENQGRVFSR"
BASE COUNT          621 a         1351 c         1390 g          662 t
ORIGIN      
        1 ctccgcggcg gcgtcggcga actcgccgag cttgtagtag acgacaccga cgttgtagtg
       61 cagcagcggc gaatcgaggc ccgccgccgc ggcctcgcgg tagcgcagca gcgcggtccg
      121 gtagacaccg gaacgcgcca gggaattgcc ctcggcgaac agcgccgagg cgctttgcgc
      181 cgcggccgga cccgcggcca gaaacggaat taacatcagt acgatcaacg ggttgaagag
      241 acgcatggcg tcctcgaagc ggcggtttcg gccactctag gcgccgcgac ggcacggcaa
      301 caggacaccc gtcacaggcg cggacgaggc cggagtcttt gcgtcagcgc gccgcgacgg
      361 cgacgtcgac gacgaacgtc ttttgctcgt ctccggaacg cagccgcgcg gcgagctggc
      421 cgcccggtcc ttcgcgcgcg accagcgtga gcggcagcgc gctggaccca ctcgaaagct
      481 cggcacgccc gacgacgcga cgttggcccg ggtgatccgc gagctcgatg ccgatcggca
      541 agtccacggt gaactcgacg tccggcaacg ccgcgcgcga gtcgaacacg aggttgatgc
      601 tgcgcggctc gccgatcgtg agcgtcacga cctccgtctc gggcgcgcgg gtgcgcgggc
      661 tgcgaacgta cagccccgtg aggatcacgg tcagcatcgt caatgcaaac gcgccgatga
      721 acccgaatgc gatcgcgcgc tggccccgcg tcggcttccg gtgctcggct gcttgcgcgt
      781 cgggcggctg tgtcacgtgt gatcgggtag gatggcgctg ggacgacggc cttggatcat
      841 actctgaatg ccttgcagag cgccctcggc ctcgccgtca tgacggcgac ggcatgggcg
      901 atcagcgaga atcgacgcgc ggtcacgtgg cgtgtcccga ccgtcggcat cgcaatgcag
      961 ctggtcgttg cttggctgct gctcgagttg ccgcccgtgc gcgcgtcgtt cggcgtattg
     1021 aacgatgccg tgctcgcgct gcaaacggcg agcgaagccg gtacgagctt cgtgttcggc
     1081 tatctcggcg gcgcgccgct gccgttcgag acattgcccg agaccagcag cgtcgtgctg
     1141 gcgttccgcg cgtttccgct cgtgctcgtc gtgagcgccc tgaccgcgct actgacgtat
     1201 tggcggatcc tgccggtcgt ggtgcgtgcg ttgtcggcga tcttcgagcg cagcttcggc
     1261 atcggcggcg ccgtggcgtt gtcgacggct gcgaacatct tcgtcggcat ggtcgaggct
     1321 ccgctgttca tccgctcgta cttgcgtcag ttgtcgcgcg gcgagctcta catggtcatg
     1381 tgcacgggca tggcgtcgat cgcgggcacc gtgctgtttc tgtatgtcac gctgctcggc
     1441 agcgtcatcg aagacgccgc aggccagctg atcacggcct cgatcatgag cgcgccggct
     1501 tcgatcatgt tcgcgtggct catggtgccg ctcgacggca aacgcaccgg agccgcgctt
     1561 acgctcggcc ccggcgcgcc gacgagcgcg atggacgcga tcacgcaggg caccgagcgc
     1621 gggctcgcgt tgctcttgaa tatcctcgcg atgctggtcg tgctggtggc gttggtcgcg
     1681 ctcgcgaatt ccttgctcgg cctgctgccc gacgtctacg gcgccgagct cacgctcgag
     1741 cgcgtgctcg gctggatgat ggcgccggtc gtatggctga tcggcgtgcc gtggtccgag
     1801 gcacccacgg caggggccct gatgggcatc aagaccgtgc tgaacgagct gcttgcctac
     1861 gtgcgcctgg ccgagctcga ggacgacttg agcgagcgga cgcgcctgct catgacctat
     1921 gcgctctgcg gcatggcaaa cttcggtagc gtcggcatca tgatcggcgg cctgacggcc
     1981 atggcgcccg aacgccggcc ggagattgtc gcgctgggcc tgaagtcgat cgtcggtggc
     2041 accctggcga cgctgtcgac gggagccgtg gtcggaatca tcacggcttg aaaccaaagc
     2101 cgcggcgcgt gggtcagaaa aggttttgga ccttaagcga ggactttgga tgcggaagct
     2161 agcggcgatc gcggcgacgg cacttgcggt gtggtcggca ccgtcgatgg ctcgtgagct
     2221 gcaagacgtg ttgaacacgg gcacgctgcg tgtcggcatc acgctgtatg caccgtgggc
     2281 gatgcgcggc aacgacggcg agctggtcgg gttcgaggtc gacgtggcgc gtcagctcgc
     2341 ggccgacttg ggcgtgaagg tcgagctcct gccctacgac gtcgagcggc tcgttcccgc
     2401 gctcgaatcg aacgagatcg acgtgatcgc cgcaggcctc acgatcacgc cggagcgtgc
     2461 gctgcacgtg aacttcagcg cgccgtatgc cgagagcggc atgacgctcg cgacgcattc
     2521 gcaaagcacg gcgcaagtct cggacatcac ggcgctcgac agcgaagagt tcacgatcgc
     2581 ggcagtcgag ggctcggtcg ccgtcgagct cgcggcacgc ctctggccgc gcgcgaagat
     2641 cgcggtgctg gattccgtcg acacggcaac ggaggcagtc ttgaccggca aagtgcacgg
     2701 ctatctcgag gacgagcccg tgccgacctt cctcgcgctc gctaaccccg acgtgatcga
     2761 cgtgccgacc gcgcggccgt tgctcgcgag ccgtgccgga ttcgccgtga acaagggcga
     2821 tcccgacttt cttgcgttct tgaacgcgtg gatcgaggcg cgcgacgcgg atacgtggct
     2881 gccgacgacg cacaattatt ggttcaagtc gctgcgctgg caggaaaggt tgcgcgatgc
     2941 gacacgccgt tgaccgcgcg cgaacggcgc tgacgctgct ctttgcagcg ctcgccgctc
     3001 cgctcgcggc acaggatgcc gaggtgccgc gcgcgccgcg aatcatcggc gcgccggcgg
     3061 ctaccgctcc gtctccagcc gcaagcccac ctcctcccgg catctcgatc gtgatgcggc
     3121 cgccgactgc agcgcggctg gcgccgttgc ccgaggaccg cgacgacggc ccggaagaga
     3181 tcatcgtcgt cggccgcggg tggcgcctgc ccgacctcgg cagcgaatgg cgcgcgcgtc
     3241 aggaggagca ggcccgctcg gaccgcctca acgcgacgct gctaccgctc tacaaccccg
     3301 acaagccgcc gccgcacgaa acgacgttct tgagccccga gcaacggcgc cacggctaca
     3361 tcgagctgtt tcgcgtgcgc ttcggccggc cccgcgacta gcccccctgc ccgggctgta
     3421 accaccctgt aacgttgacg taaaacaact gcaaaacctc cgtggtggac tgctctgcaa
     3481 cccgcaggcg gagcccacat gaacggagcg atactcctga ttcacgacga gcaggcgctg
     3541 cggtcgtcgg cacgcgaaac cttgagttcg gcaggccacg aggtcgccga ggcggccgac
     3601 ctcgcgaccg gagcccggat cgcggagcgt gtgcggccgg cgctgatcct gttgccgtgg
     3661 ctcggccgcc ggcccgtccg cgaggcgctg acgcagctgc gcacgagcga cgcgacgcgc
     3721 cgcacgcggc tcatggtctg ggccgagcaa agcgatatcg gtaacgccgt cacggcgctc
     3781 gagttcggcg cggacgatct attggcattg ccgttcgatt cggccgagct cgtcgcacgc
     3841 gtgaacgcgt gcctgcgccg gccgctcgcg atgacgcggc ccgaccggct cacggccggc
     3901 cccctcgtgc tcgacaaggc cgtgcatcag ctcacggtcc gcggcgaaga ggtcgcgctc
     3961 tctcccgcag agttccgcct gctcgcattc ctgctcgaaa accagggacg cgtgttcagc
     4021 cgcg
//
LOCUS       DATCUD010000268         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52466, whole genome shotgun sequence.
ACCESSION   DATCUD010000268 DATCUD010000000
VERSION     DATCUD010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52466"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="VIQ99_03915"
     CDS             complement(<1..277)
                     /locus_tag="VIQ99_03915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014995924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY9182321.1"
                     /translation="MHTRTLVQLAGDLRARRVSATELVRHYLDRIGRFDDALNAFVTV
                     TSEQALAQAAAADVRLAKGEATLLTGLPLAHKDIFCTSGVKTSCGSRM"
     gene            complement(342..626)
                     /gene="gatC"
                     /locus_tag="VIQ99_03920"
     CDS             complement(342..626)
                     /gene="gatC"
                     /locus_tag="VIQ99_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011469666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEY9182322.1"
                     /translation="MLRPEDLQRLCRLARLEIGPAEVPDVSAKLSSIVAMVDQLQAVD
                     TTGVAPMAHPLDRPQRLRADTVTEVDQHELYQRNAPLVERDLYLVPKVIE"
     gene            748..1791
                     /locus_tag="VIQ99_03925"
     CDS             748..1791
                     /locus_tag="VIQ99_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019865466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEY9182323.1"
                     /translation="MLKSFLGYFSNDLSIDLGTANTLIYVRGRGIVLNEPSVVAIREE
                     PGRGGKVLEAVGIEAKNMLGRTPGHITAIRPMKDGVIADFSVTEKMLQHFIKKAHGSR
                     YFRPSPRVLVCVPYGSTQVERRAIRESAEGAGARKVYLVEEPMAAAIGAGMPVHEARG
                     SMVLDIGGGTSEVAVISLNGIVYAASVRIGGDRFDDAITNYVRRNYGILIGEATAERI
                     KHEIGSAYPGQDVREISVKGRNLSEGVPRSFTLNSNEILEALQEPLQGIVGAVKVALE
                     QTPPELGADVAERGIVLTGGGALLTDIDKLLTEETGLPVVIADEPLTCVARGGGRVLE
                     LLDEYGPSAFSVE"
     gene            1884..>2198
                     /locus_tag="VIQ99_03930"
     CDS             1884..>2198
                     /locus_tag="VIQ99_03930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEY9182324.1"
                     /translation="MGARFLLLAIVCIALMMLDRRDQHLVRVRQALSVAVYPVRMLVD
                     LPFRTAHSLRDTFAARDALIAENQQFRRERLETEARLQRLAALEMENERLRSLLESRG
                     RVG"
BASE COUNT          369 a          684 c          752 g          393 t
ORIGIN      
        1 gcattcgcga gccgcacgac gtcttgacgc ccgacgtgca gaagatgtcc ttgtgcgcga
       61 gtggtaagcc cgtgagcaaa gtcgcttcgc ccttcgcgag ccttacgtcg gcggcggcgg
      121 cttgagcgag cgcttgctcg ctcgtcacgg tcacgaacgc gttcaaggcg tcgtcgaaac
      181 ggccgatccg atcgaggtag tgacgcacga gctccgtcgc cgagacgcgc cgcgcccgaa
      241 ggtcgccggc cagttgtacg agggtgcgtg tgtgcatgcg ggttcaggtc tatggcttgg
      301 ctatctgccc ggcgatcgct cgggcagatg cgcgcgcccg gttactcgat gaccttcgga
      361 acgagataca ggtcacgttc tacgagcggg gcgtttctct gatacagctc gtgctggtcg
      421 acttccgtca cagtatcggc ccgcaagcgc tgtgggcggt cgagcgggtg ggccatcggc
      481 gccacgccgg tggtgtcgac ggcctgaagc tggtcgacca tggcgacgat gctggacaac
      541 ttggccgaga cgtcggggac ctcggcgggg ccgatttcga ggcgtgcgag gcgacagagt
      601 cgctgtaggt cttcggggcg aagcacggtg gttctcggcg cgaaaaatga agtgatcgac
      661 ttctcattag ataatacacg tcgcttgtgg attggcctac ccgttgctaa agtcccgcca
      721 cgattcccct agcggccttg ggcctcaatg ttaaagagct ttctcggata cttttccaac
      781 gatctttcca tcgatctcgg cacggcgaac accctgattt acgtccgcgg ccgcggcatc
      841 gtgctgaacg agccgtcggt cgtcgcgatt cgcgaggagc cgggccgggg tggcaaggtc
      901 ctcgaggccg tcggcatcga ggcgaagaac atgctcggcc gcacgccggg gcacatcacg
      961 gccattcgcc ccatgaaaga cggcgtgatc gccgacttca gcgtcaccga gaagatgctg
     1021 cagcacttca tcaagaaggc gcacggctcg cgctacttcc gtccgagccc gcgggtgctc
     1081 gtgtgcgttc cgtacggctc gacgcaagtc gagcgccgtg cgatccggga gtcggccgaa
     1141 ggcgccggcg cgcgcaaggt gtatctcgtc gaggaaccga tggccgcggc gatcggcgcc
     1201 ggcatgccgg tgcatgaagc gcgcggctcg atggtgctcg acatcggcgg cggcacatcc
     1261 gaggtcgccg tgatctctct gaacggcatc gtctacgcgg cgtcggtccg catcggcggc
     1321 gaccgattcg acgatgcgat cacgaactac gttcgccgca actacggaat tttgatcggc
     1381 gaagcgacgg cggaacgcat caagcacgag atcggctcgg cgtacccggg ccaggacgtg
     1441 cgcgagattt ccgtcaaggg ccgcaatctc tcggaaggcg tgccccgcag cttcacgctg
     1501 aacagcaacg agatactcga agcgttgcag gaacctctcc agggaatcgt gggcgcggtc
     1561 aaggtcgcgc tcgagcagac accgcccgag ctcggcgccg acgtcgcgga acgcggcatc
     1621 gtgctcacgg gtggcggcgc cttgttgacg gatatcgaca agctgctgac ggaggaaacc
     1681 ggactgccgg tcgtgattgc cgacgagccg ctcacgtgtg tcgccagggg cggcggccgc
     1741 gtgctcgagc tcctcgacga gtacgggcct tcggcattct cggtggagtg atctttcggc
     1801 ctagccggca ctagcgcgca ggagcgaacg caatgagtgg gcccggtaga accaccccag
     1861 gcttcgggcg gagcgggttc tccatgggcg cgcgattcct gctgctcgcg atcgtttgta
     1921 tcgcgttgat gatgctcgat cgccgcgacc aacatctcgt gcgcgtgcgc caagccttgt
     1981 cggtcgccgt ctatccggtc cgcatgctcg tcgacttgcc gtttcgcacc gcgcattcgc
     2041 tgcgcgacac gttcgcggca cgtgatgcgc tgatcgcgga gaaccaacag ttccgccgcg
     2101 agcggctcga gaccgaggcg cggctgcagc ggctcgcggc gctcgagatg gagaacgagc
     2161 ggctcaggag cctgctcgag tcgcgcgggc gcgtcggc
//
LOCUS       DATCUD010000269         1930 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59359, whole genome shotgun sequence.
ACCESSION   DATCUD010000269 DATCUD010000000
VERSION     DATCUD010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59359"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(135..551)
                     /locus_tag="VIQ99_03935"
     CDS             complement(135..551)
                     /locus_tag="VIQ99_03935"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9182325.1"
                     /translation="MMHQSTLRGSLGIALALIGTLGAAILSAQPPAGNAAIVGNAARG
                     QPLFSDTFNCYACHGFDAQSGERRLVPLTYTQEGFITFVQSSPLPNMPAYPDASAQDL
                     ADIYAYIRTIPVDAPAVNDLPLLRDILERKNRAAAQ"
     gene            complement(560..>1930)
                     /locus_tag="VIQ99_03940"
     CDS             complement(560..>1930)
                     /locus_tag="VIQ99_03940"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY9182326.1"
                     /translation="VINRPHSAQDMGAIVRDFMKMDDEPTALEVFGNIAMRAYTIGRT
                     PPMGPTLLVVDSELQEAPIADPAKLSVPRLTMPSVPQGDAGAVREAARLLAAAERPLI
                     RTGKLGRTSAGWDLIIELAELLQAPVDVGTYGSWQDFPSWHALYGSGGPDYRPDVILG
                     LELNDMTASVRAVRASGGKTISICSEYLAQGHNIHDFGNYSEVDVPIAADGEATLPSL
                     LEELRRQSPSSAARARSARGATIAAAHKAIREREIDDARYGWNGSPISVPRMIAELGR
                     QIQNDDWAIVSGHQFTGQWQRRLLNHDKFYRYNGDCGGFGIGYDTPASVGGALAHRAH
                     GRLAVGIVGDGDFNFVGAGALWTAAHHKIPLLLVIHNNRAYHAEVMLVQRTAARRGRG
                     NDNVDIGNVIRDPAPDYAKIAQGFGVYAEGPISDPNALGPAFERALARVRAGEPALVD
                     VISQPR"
BASE COUNT          298 a          612 c          666 g          354 t
ORIGIN      
        1 gccgtatgcc gagcgcggtc atgcgttctt tttcggacga ctgcgcgatg caggtcgccg
       61 cgaagggcag tgccgcgatt gctgcggcca cgactgcgac gatttttcgg tgcatcgatg
      121 cttgccctcg cggcctactg cgccgccgcg cgattctttc gctccagtat gtcacgtaac
      181 aacggtaggt cgttcacggc cggggcatcg acggggatcg tgcgaatgta ggcgtatatg
      241 tcggcgagat cttgggcgga ggcatccggg tacgccggca tgttcggcaa cggcgagctc
      301 tgcacgaacg tgatgaagcc ttcctgcgtg taggtcaaag gcacgagacg ccgctcgccg
      361 ctctgggcgt cgaagccgtg gcacgcgtaa caattgaacg tgtccgagaa cagcggttgc
      421 ccgcgggcgg cgttgccgac gatcgcggca tttccggcgg gcggttgcgc ggacaaaatg
      481 gccgctccga gcgtgccgat caatgcgagt gcgatgccca gcgagccgcg cagtgtcgat
      541 tgatgcatca tcgggtcaac taccgcggct gagagatcac gtcgaccagc gcgggctcgc
      601 cggcgcgtac gcgagccagc gcgcgctcga acgccggccc caacgcgttc ggatcgctga
      661 tcggcccctc ggcgtagacg ccgaagccct gcgcgatctt cgcgtagtcg ggcgcgggat
      721 cgcggatcac gttgccgatg tcgacgttgt cgttgccgcg gccgcggcgc gcggcggtgc
      781 gctgtaccag catgacttcg gcgtgatacg cgcggttgtt gtggatcacg agcagcagcg
      841 gaatcttgtg gtgcgcggcc gtccacaacg ctccggctcc gacgaaattg aagtcgccgt
      901 cgccgacgat gccgacggcc aagcgtccgt gcgccctgtg ggcgagcgct ccgccgacag
      961 aggccggcgt gtcgtagccg atgccgaatc ctccgcagtc gccgttgtag cgatagaact
     1021 tgtcgtgatt cagcaagcgt cgctgccact gacccgtgaa ctggtggccc gacacgatgg
     1081 cccagtcgtc gttttgtatc tggcgtccga gctcggcgat catgcgcggc acgctgatcg
     1141 ggctgccgtt ccagccgtaa cgggcgtcgt cgatctcgcg ctcgcggatc gccttgtggg
     1201 cagccgcgat cgttgcgccg cgtgcgctgc gtgcgcgcgc ggccgagctc gggctctggc
     1261 gccgcaattc ttcgagcaac gacggcagcg tcgcctcgcc atcggccgcg atcgggacgt
     1321 cgacctcgga gtagttgccg aagtcgtgga tgttgtggcc ctgcgcgaga tactccgagc
     1381 agatgctgat cgttttgccg ccgcttgcgc gcacagctcg caccgacgcg gtcatgtcgt
     1441 tgagctcgag gcccaggatc acgtccggcc gatagtcggg cccgccggag ccgtacagcg
     1501 cgtgccagga agggaaatcc tgccacgagc cgtacgtgcc gacgtcgacg ggtgcttgca
     1561 acaactcggc gagctcgatg atcagatccc acccggcaga cgttcggccg agcttgccgg
     1621 ttctgatcaa cgggcgctct gccgccgcga gcagacgcgc cgcttcgcgc acggcgccgg
     1681 catcgccctg cgggacgctc ggcatcgtaa gacgcgggac cgagagtttc gcgggatcgg
     1741 cgatgggagc ttcttgcagt tccgaatcca cgacgagcag tgtcgggccc atcggcggcg
     1801 tgcggccaat cgtgtatgca cgcattgcga tgttgccgaa gacttcgagc gccgtgggct
     1861 catcgtccat tttcatgaag tctcggacga ttgcgcccat gtcctgagcg ctgtgggggc
     1921 ggttgatcac
//
LOCUS       DATCUD010000270         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_87913, whole genome shotgun sequence.
ACCESSION   DATCUD010000270 DATCUD010000000
VERSION     DATCUD010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87913"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1081)
                     /locus_tag="VIQ99_03945"
     CDS             complement(<1..1081)
                     /locus_tag="VIQ99_03945"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY9182327.1"
                     /translation="MTAIIPGHAPRVALAALGFATFTAAAETLEEAWRAGLANDQRLV
                     AAQHREGAADAALSAARAGHYPSVSLGTTASRWRDTPAFDFSAAGMPAAMPLFSGNSF
                     TLANAQVSLPLYSGGAIGANVAAATATLDNQARAAEALRQDVKLAVAEAYVGVLSAQS
                     ALAVARANTASLDAHARDVEDMRRAGQVPTNDYLAAAVTLADATQRELQAANALEIAN
                     AVYNRRVGRPFDAPVTLDPLDQPLGALTAATSLDELVSAAKETRAELAGLTAAAEALD
                     ARATAARAARRPQLAVNGGYAFLENDFLTREDYWFVALGLRWSFFDSGQTRHAIANFR
                     RQSEAARAERTDLAAGVELDVRRAFA"
     gene            complement(1094..>1746)
                     /locus_tag="VIQ99_03950"
     CDS             complement(1094..>1746)
                     /locus_tag="VIQ99_03950"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013722203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD/NAD(P)-binding oxidoreductase"
                     /protein_id="HEY9182328.1"
                     /translation="LMESEFRQRHIKWITNATVDKIEAGKVVVTARDEQGQPVQTQTL
                     ESKFTMLLPAFKGIDAVAAVEGLCNPRGFVLVDAHQRSAKYPNIYAAGVGIAIPPVEK
                     TPVPTGAPKTGYMIESMVSAIVANIAAELRGEAPSARASLNAICLADAGDDGLAFVAL
                     PELPPRNVTWAKKGKWVHLAKIAFEKYFLHKVKSGNTDPVYERYVLKLLGIERLET"
BASE COUNT          252 a          581 c          612 g          301 t
ORIGIN      
        1 cggcaaaggc gcgacgcacg tcgagctcga cgccggcggc gaggtcggtc cgctcggcgc
       61 gggccgcttc ggactgccgc cggaagttcg cgatcgcgtg ccgcgtttgg ccgctgtcga
      121 agaagctcca gcggagtccc aatgcgacga accagtagtc ctcacgggtc aagaaatcgt
      181 tctcgaggaa cgcgtagccg ccgttcacgg cgagctgcgg ccggcgggcg gcgcgcgcgg
      241 ccgtggcgcg tgcgtcgagc gcttccgcgg ccgcggtcag ccccgccagc tccgctcgcg
      301 tctccttggc tgcgctgacg agctcatcga gcgatgtagc agcggtgaga gcacccagcg
      361 gctggtcgag cggatccagc gtgacggggg cgtcgaacgg ccgcccgact cgccggttat
      421 agaccgcgtt ggcgatctcg agcgcgttcg cggcttgcag ctcgcgctgg gtcgcatcgg
      481 cgagcgttac ggccgccgcg aggtaatcgt tggtcggcac ttggccggcc cggcgcatgt
      541 cctcgacgtc gcgtgcgtgc gcgtcgagac tggccgtgtt cgcgcgagcg accgccaggg
      601 cgctctgcgc gctcagcacg ccgacgtaag cttcggcaac ggccagcttt acgtcctggc
      661 gcagggcctc ggccgcacgc gcttggttgt ccagcgtcgc ggtggccgcg gccacgttgg
      721 cgccgatcgc cccgccgcta tacagcggta gtgagacctg cgcattggcc aacgtgaagc
      781 tgttgccgga gaagagcggc atcgcggccg gcatgcccgc ggcactgaag tcgaacgcgg
      841 gtgtatcgcg ccagcggctc gcggtcgtgc cgagcgagac gctcggatag tgcccggccc
      901 gagcggccga gagcgccgca tcggctgcac cttcgcggtg ctgcgccgca acgagacgct
      961 gatcgttggc caggcctgca cgccaggcct cctcgagcgt ttccgctgcg gccgtgaagg
     1021 ttgcgaaacc gagcgcggcg agggcaaccc gcggcgcgtg tccgggaatg atcgccgtca
     1081 tcggtggccg ccttcaggtc tcgagccgct cgatgccgag gagcttcagc acatagcgct
     1141 cgtacacggg gtccgtgttc cccgacttga ccttgtgcag gaaatatttc tcgaacgcga
     1201 tcttggcgag gtgcacccac ttgcctttct tcgcccacgt gacattgcgt ggtggcaact
     1261 cgggcagggc gacgaaagcg aggccgtcgt cgcctgcatc cgcgaggcag atggcattca
     1321 gcgatgcgcg cgccgagggc gcttcaccgc gcagctcggc ggcgatgttg gcgacgatcg
     1381 cgctcaccat cgactcgatc atatagccgg tcttcggcgc accggtcggc acgggcgttt
     1441 tttccacggg agggatcgcg attccgactc ccgccgcgta gatgttcggg tatttcgcgc
     1501 tgcgctggtg ggcatcgacg agcacgaagc cccgcggatt gcacagccct tcgaccgcgg
     1561 cgaccgcgtc gatgcctttg aaagcgggca acagcatcgt gaacttcgat tcgagcgtct
     1621 gagtctgcac cggctggccc tgctcgtcgc gcgcggttac gacgaccttg ccggcctcga
     1681 tcttgtcgac ggtcgcattc gtgatccact tgatgtggcg ttggcggaat tcggactcca
     1741 tcagcc
//
LOCUS       DATCUD010000271         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52475, whole genome shotgun sequence.
ACCESSION   DATCUD010000271 DATCUD010000000
VERSION     DATCUD010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52475"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1040
                     /locus_tag="VIQ99_03955"
     CDS             <1..1040
                     /locus_tag="VIQ99_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019301724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY9182329.1"
                     /translation="AIFVGQVAAALAAGNTVIAKPAEQGTLVAARAVALLEQAGLPKD
                     ALAFLPGDGRALGEALFRDPRVAGVAFTGSVETARAINSALAARSGPLATLIAETGGV
                     NAMIVDTSALPEQVVRDAVTSAFNSAGQRCSALRLLCLPDPTADEIVRMLRGAMDQLV
                     IGGPNLYSTDVGPVIDADAHADLERYVAEHAAAVVHRCRLAAAHANGWFTAPTLIELP
                     RAAALTREVFGPVLHVVRYRPDDLDELVDEINAQGYGLTLGVHTRIDATAKAIAQRAR
                     VGNVYVNRNMIGAQVGVQPFGGMGLSGTGPKAGGPHYLPRFTTERTVSTNTAAVGGNA
                     TLLSLEADAAG"
     gene            complement(1256..>1808)
                     /locus_tag="VIQ99_03960"
     CDS             complement(1256..>1808)
                     /locus_tag="VIQ99_03960"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011038421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9182330.1"
                     /translation="GNMVSLIQSNYMGFGSGVTVVPFGFGLQNRGSQFALDPKHANVY
                     APGKRPFHTIIPAFAARDGEALLAFGVMGAAMQPQGQVQVLSNVVDFGMNLQAAGDAP
                     RVRHEGSTEPTGAAQLPDGGVVYLERGLDAALPGLRARGHRIQPGEGSAAFGGYQAIL
                     RDLRAGVYRGASESRKDGHAAGF"
BASE COUNT          277 a          625 c          628 g          278 t
ORIGIN      
        1 tcgcgatctt cgtggggcag gtggctgccg cgctcgcggc cggcaacacc gtgatcgcaa
       61 agcccgcgga gcaaggcacg ctggtcgccg cgcgcgctgt tgcgttgctc gagcaggccg
      121 gcctacccaa ggatgcgctc gcattcttgc ccggcgacgg ccgcgcgctc ggcgaagcgc
      181 tgttccggga tccgcgcgtc gcgggcgtgg cgttcacggg ctccgtcgag acggcccgag
      241 cgatcaactc cgcgctcgcc gcgcgcagcg gcccgctagc gacgctgatc gccgagaccg
      301 gcggcgtgaa cgcgatgatc gtcgacacgt ccgccctacc ggagcaggtg gtccgcgacg
      361 ccgtcacttc ggcgttcaac agcgccggcc agcgctgctc ggcgctgcgc ctgctgtgct
      421 tgcccgaccc gacggccgac gagatcgtgc ggatgttgcg cggcgcgatg gatcagctcg
      481 tgatcggggg cccaaacctg tactcgaccg acgtcggtcc cgtgatcgac gcggacgcgc
      541 acgcggacct cgagcgctat gtggccgagc acgccgccgc cgtcgtgcat cgttgtcggc
      601 tcgcggccgc gcacgcgaac ggctggttca cggcgccgac gctgatcgag ttgccgcgcg
      661 ccgcggcgct gacacgtgaa gtgttcgggc ccgtgctgca cgtcgtgcgt tatcggccgg
      721 acgacctcga cgagctcgtc gacgagatca acgcgcaggg ctatggcttg acgctcggcg
      781 tgcacacgcg catcgacgcg acggcgaagg cgatcgcgca gcgcgcacgg gtcggcaacg
      841 tctacgtgaa tcgcaacatg atcggcgccc aagtcggcgt tcagccgttt ggtggcatgg
      901 ggttgtcggg cacggggccg aaggccggtg ggccgcacta tttgccgagg ttcacgaccg
      961 agcgcacggt cagcacgaac acggcggccg tcggcggcaa cgcgacgctg ttgtcactcg
     1021 aagcggacgc cgcgggttga gttccccaat atcgagcaac cgagccagac tacgcccgca
     1081 aacagtgcaa ctcgggcccc ggaagcgccc gaaacccgag gatttgcagg ggtttggact
     1141 tggcacggcg tttgctatct acaccgtggg cagggtcggt cgcggttgtc acctgagtcg
     1201 ctccccccca acgattttac tgcaccgcga ccgcttctgc ccactaactc ccctttcaaa
     1261 aaccggccgc gtgcccgtct ttgcgcgact cggaagcgcc gcgatacacg ccggcgcgaa
     1321 ggtcgcgcaa gatcgcttgg tagccgccga acgcggcgct gccttcgcca ggctggatgc
     1381 gatggccgcg cgcacgcagg ccggggagcg ctgcgtcgag gccccgctcg agatacacga
     1441 cgccgccgtc gggcagctgc gcagcgccgg tcggctccgt cgagccctcg tggcgcacgc
     1501 gcggagcatc gccggcggct tgcaggttca tgccgaagtc gacgacgttc gagagcacct
     1561 gcacctggcc ctgcggctgc atcgctgcgc ccatgacgcc gaacgcgagc aacgcttcgc
     1621 cgtcgcgtgc cgcgaacgcg ggaatgatcg tgtggaacgg tcgcttgccc ggcgcgtaca
     1681 cgttcgcgtg cttggggtcg agcgcgaact gcgagccgcg gttctggagc ccgaagccga
     1741 acggcacgac cgtgacgccc gagccgaagc ccatgtaatt gctctggatc agggacacca
     1801 tgtttccg
//
LOCUS       DATCUD010000272         2541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66790, whole genome shotgun sequence.
ACCESSION   DATCUD010000272 DATCUD010000000
VERSION     DATCUD010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2541
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66790"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VIQ99_03965"
     CDS             complement(<1..313)
                     /locus_tag="VIQ99_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182331.1"
                     /translation="MTSARLLLSAAATLVLAFGAAAQDRQIEVDSHLLLGDIALDRRD
                     FATAASEFLAAAMLSDEPGPAERATRMAHQLELTEPGIRAARRWRELAPDDERSAWYL
                     GV"
     gene            379..1221
                     /locus_tag="VIQ99_03970"
     CDS             379..1221
                     /locus_tag="VIQ99_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007474599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEY9182332.1"
                     /translation="MESLTTFLSTWLDPQVVGEVVMNWGGRALAALLIFVVGRLIARA
                     LTRLFSLAVQRVGLDDTVARFLGNLIYMVLLVFVLLTALSTLGVDTTNFIAIVGAAGL
                     AVGLALKDSLSNFSSGVMILFFRPFKVGDQIDAAGTGGVVESVGIFNVMLKTPDNRVI
                     NVPNSLIYGGTITNYSAETTRRVDLTIAIGYDADIAQARSVIEAVIAADARIAQMPAP
                     EIVVQEILLTAVTLAVRVWVKTADYLPVRGDLLERIKRALDKYGLSIPAEQRVLPGAQ
                     PVSK"
     gene            1218..2306
                     /gene="prfA"
                     /locus_tag="VIQ99_03975"
     CDS             1218..2306
                     /gene="prfA"
                     /locus_tag="VIQ99_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009839299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEY9182333.1"
                     /translation="MKESLRTKLTELVERHEEVARLLGDASTIADKERFRDLSKEYAR
                     LDAVARDFNSYRDLERDIAAAEELRASADADMRALAEDEYKELAERRTALERQLLVHL
                     VPKDPHDDANLFLEVRAGTGGDEAAIFAGDLFRMYSRYAERQGWTVEVLSANPGEHGG
                     YREVISRLAGKGAYSKLKFESGVHRVQRVPETEAQGRIHTSTCTVAVFPEPEDIGEIE
                     VNKADLKIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVECQDERSQHKNRARAMSLL
                     QARLQNAEETKRQAETAEKRRSLVGTGDRSERIRTYNFPQGRLTDHRINLTLYKVEDI
                     VNGDLDDVIGPLANEYQADQLGSLGLEP"
     gene            2308..>2541
                     /locus_tag="VIQ99_03980"
     CDS             2308..>2541
                     /locus_tag="VIQ99_03980"
                     /inference="COORDINATES: protein motif:HMM:NF037644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182334.1"
                     /translation="MNARLPFDDSGPSAERTSTAAVLAAAAARLGAASDTPRLDAEVL
                     LAFLTGRARASLLAFPEREVAPEIGRRFEGLVAR"
BASE COUNT          438 a          829 c          863 g          411 t
ORIGIN      
        1 acacgccgag ataccacgcg gaccgctcgt cgtcgggcgc gagctcgcgc caacgtctgg
       61 ccgcccggat gccgggctcc gtgagctcga gctggtgcgc catccgcgtc gcgcgctcgg
      121 ccggtcccgg ctcgtcggac agcatcgcgg ccgcaaggaa ctcggacgcc gccgtcgcga
      181 agtcgcggcg gtccagcgcg atgtcgccga gcaggagatg cgagtcgacc tcgatctggc
      241 ggtcctgcgc tgccgcgccg aatgcaagca ccagggtcgc ggcggcggac aacaacaggc
      301 gggcggacgt catgcgggcc aatataactc agccggcgct tgcttgtgat cgcgggatga
      361 ttctccgaca atttgccgat ggaaagccta acgacgttct tgtccacgtg gctcgacccg
      421 caggtcgtcg gcgaagtcgt catgaattgg ggcggccggg cgttggccgc tctgttgatt
      481 ttcgtggtcg gccgattgat cgcccgagcg ctgacacggc tgttcagcct cgccgtgcag
      541 cgggtgggcc tcgacgatac ggtcgcgagg ttcctcggca acctgatcta catggtgttg
      601 ctggtcttcg tgcttttgac ggcgctctcg acgctcggcg tagataccac gaatttcatc
      661 gcgatcgtcg gcgccgcagg cctcgcggtc ggcctcgcgc taaaggattc tttgagcaac
      721 ttctcgtcgg gcgtcatgat tctgttcttc aggccgttca aggtcggaga ccagatcgac
      781 gcggccggca ccggcggcgt cgtcgagagc gtgggcatat tcaacgtcat gctgaagacg
      841 ccggacaacc gcgtgatcaa cgtgccgaac agcctgatct acggcggcac gatcacgaat
      901 tacagcgccg aaacgacccg ccgcgtcgat ctcacgatcg cgatcgggta tgacgccgac
      961 atcgcgcagg ccaggtccgt gatcgaagcc gtgatcgcgg ccgacgcgcg cattgcgcag
     1021 atgccggcgc ccgagatcgt cgtgcaggag attctgctga cggccgtcac gctcgccgtg
     1081 cgagtgtggg tcaagaccgc cgactacctt cccgtgcgcg gcgatttgct cgagcgaatc
     1141 aaacgcgcgc tcgacaagta cggtctttcg attccagccg agcagcgcgt tctgccgggg
     1201 gcgcagccgg tcagcaagtg aaggagtcgc tgcgcaccaa gctcacggag ctggtcgagc
     1261 gacacgagga agtcgcgcga ttgctcggcg atgcctccac gatcgcggac aaggaacggt
     1321 tccgcgacct gtcgaaggag tacgcgcgtc tcgatgcggt cgcgcgcgat ttcaatagct
     1381 accgcgatct cgagcgcgac atcgccgcgg ccgaggagct gcgcgcgagc gcggacgccg
     1441 acatgcgcgc gctcgccgag gacgaataca aggaattggc cgagcgtcgc accgcgctcg
     1501 agcgccagct gctggttcat ctcgtcccga aagatccgca cgacgatgcg aacctgttcc
     1561 tcgaagtgcg tgccggcacc ggcggcgacg aggccgcgat tttcgcgggc gacctgtttc
     1621 gaatgtacag ccgctacgcg gaacggcagg ggtggacggt cgaggtcttg agcgcgaatc
     1681 ccggcgagca cggcggttat cgcgaggtca tctcgcgcct ggccggcaag ggtgcgtact
     1741 cgaagctgaa gttcgagtcc ggtgtgcacc gcgtgcagcg cgtgcccgag accgaggcgc
     1801 aaggccgcat tcacacctcg acctgcaccg tcgcggtgtt cccggagccc gaggacatcg
     1861 gcgagatcga ggtcaacaag gccgatctca agatcgacac gtttcgcgcc tccggcgccg
     1921 gcggccagca cgtgaacaag accgactcgg cgattcggat cacgcatttg ccgaccggca
     1981 tcgtcgtcga gtgccaggac gagcgctcgc agcacaagaa ccgcgcgcgt gcgatgtcgt
     2041 tgctgcaagc gcggttgcag aacgccgagg agacgaagcg tcaggcggag acggccgaga
     2101 aacgccgcag cctcgtcggc accggcgatc gctcggagcg catccgcacg tacaacttcc
     2161 cgcaggggcg gctcacggat caccgcatca acctgacgct gtacaaggtc gaggacatcg
     2221 tgaacggcga cctcgacgac gtgatcggtc cgctcgcgaa cgaataccag gccgatcagc
     2281 tcggctccct cggcctcgag ccttgagatg aacgcgcggc tgccattcga cgactccggg
     2341 ccgagtgcag agcgcacgtc gacggctgcg gtgcttgccg ctgccgccgc gcgactcggc
     2401 gccgcgagcg atacgccgcg tctcgacgcc gaggtgctgc tggcgttcct gaccggccgc
     2461 gcgcgtgcat cgctgctcgc gttcccggag cgcgaagtgg cgcccgagat cgggcggcgc
     2521 ttcgaggggc tcgtcgcacg g
//
LOCUS       DATCUD010000273         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73817, whole genome shotgun sequence.
ACCESSION   DATCUD010000273 DATCUD010000000
VERSION     DATCUD010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73817"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..927)
                     /locus_tag="VIQ99_03985"
     CDS             complement(<1..927)
                     /locus_tag="VIQ99_03985"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182335.1"
                     /translation="MIARFLCVSTVLVASSALAHHGFGLFDRTKPVEIEGVIKSIDFV
                     NPHSYLNLDVIGSDGNLIAMRCEMRAATLLRRSGWSKEMFVEGAQAKISGWGHRDDPA
                     ACYIENITIGDAPTRNRNDQFTTQAVDTSNRPKRLPTGEPNITGDWAQEQYVIAVPPS
                     GGGNLVPKSLIAAVESGQLAMRDVPPSGWGPRPVTYTARGKAEADAFQTWSPADNPRL
                     RCRPTSIIFDWVFDGPVNRITQERDRIVIDYGLYSFQRVIHMNMAQHPANITPSYSGH
                     SIGRWEGDVLVVDTIGFEPGLLAAPVRHSDQLH"
     gene            1287..>1736
                     /locus_tag="VIQ99_03990"
     CDS             1287..>1736
                     /locus_tag="VIQ99_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006981106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182336.1"
                     /translation="MPRCAPQQWLKGQKALVTGASSGIGRAIAVALGEAGADVVVNYA
                     SAEGPAREVAAAIEDLGSRALVHKADVSSEQEVERMFATMQGELGTIDILVNNAGLQQ
                     DAPFEELTLAQWNRVIGVNLTGQFLCARAAVREFKRRGVRPEVSCSAG"
BASE COUNT          282 a          599 c          571 g          284 t
ORIGIN      
        1 gtggagctga tcgctgtgtc gcacgggtgc cgccagcagg ccgggctcga aaccgatcgt
       61 gtcgacgacg agcacgtcgc cttcccacct tccgatcgaa tgccccgagt agctcggcgt
      121 gatgttggcg ggatgctgcg ccatgttcat atggatcacg cgctgaaagc tgtagagccc
      181 gtagtcgatg acgatgcggt cgcgctcttg cgtgatccga ttgacggggc cgtcgaacac
      241 ccagtcgaag atgatgctcg tgggccggca gcgtagccgc gggttgtccg cgggcgacca
      301 cgtctggaac gcgtcggcct cggccttgcc gcgcgccgtg tacgtcacgg gccgcgggcc
      361 ccagcccgac ggcggcacgt cgcgcatcgc gagctggccg gactcgacgg ccgcgatcaa
      421 gctcttcggc acgaggttcc cgccgccgct cggcggcacc gcgatcacgt actgctcctg
      481 tgcccaatcg cccgtgatgt tcggctcgcc ggtcggcaag cgtttcggtc gattcgacgt
      541 gtcgacggct tgcgtcgtga actgatcgtt gcggttgcgc gtcggcgcat cgccgatcgt
      601 gatgttctcg atgtagcacg cggcgggatc gtcgcgatgg ccccagcccg agatcttggc
      661 ttgcgcgccc tcgacgaaca tctccttcga ccaacccgag cgacgcaaca gtgttgcggc
      721 acgcatctcg cagcgcatgg caatcaggtt gccgtcggag ccgatcacgt cgaggttcag
      781 ataggaatgt ggattcacga agtcgatgct cttgatgacg ccctcgatct cgacgggctt
      841 cgtgcgatcg aacagcccga agccgtgatg cgcgagcgcc gacgacgcga cgagcacggt
      901 cgacacgcac agaaaccgcg caatcatcta ggcacctccc gctcggcgcc ggatcggact
      961 ccgttgccaa tgtagctcag cccatccgac tccgcatcag caccgcggcg cgtcgtggga
     1021 tccccaccat cggccgcgga tccgccgcgc ctgtgatcca agatcggcgc gcacgcgccc
     1081 tccgggcgcc gccgctgctc gtcctcggtg attcgacggc actggcatgc acgttgcaga
     1141 ggacgctgca ccaatcgcac ctcaaggatc cacccatgga agccgcctta tcgacgatgt
     1201 caccgcaacc ggcgcgcgcg ctgcatggct gcgccgcacc gaacggtcac actctcggcc
     1261 gcggcaccga gctcccgcgc gccgtcatgc cccgctgcgc accacagcag tggctcaagg
     1321 ggcagaaagc gctcgtcacg ggcgcgagct ccggcatcgg tcgcgcgatc gcggtcgctc
     1381 tcggagaggc cggcgccgac gtcgtcgtca attacgcgtc cgcggagggc cccgcgcgag
     1441 aggtcgccgc ggcgatcgag gacctcggca gccgtgccct cgtgcacaag gccgacgtct
     1501 cgagcgagca agaggtcgag cgcatgttcg ccacgatgca gggcgagctc ggcacgatcg
     1561 atatcctcgt caacaacgcc ggtcttcagc aggacgcacc gttcgaagag ctgacgctcg
     1621 cgcagtggaa cagagtcatc ggcgtgaatc tgacaggcca gttcctgtgc gcgcgcgccg
     1681 ccgtgcgcga gttcaagcgg cgcggcgttc ggcccgaggt ttcgtgcagc gccggc
//
LOCUS       DATCUD010000274         2205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24154, whole genome shotgun sequence.
ACCESSION   DATCUD010000274 DATCUD010000000
VERSION     DATCUD010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24154"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VIQ99_03995"
     CDS             <1..355
                     /locus_tag="VIQ99_03995"
                     /inference="COORDINATES: protein motif:HMM:NF012342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEY9182337.1"
                     /translation="AAAKAAVAETFINNGVVPEDREDAGMSPDPTDTRGKYVSSVEIH
                     DGRIDILYGGEANSIIAGQVLSITPYGKLGDGDSWSVLWRCGHAPVPDGATHEIAPYE
                     VTNIQQQYLPAACRP"
     gene            393..1256
                     /locus_tag="VIQ99_04000"
     CDS             393..1256
                     /locus_tag="VIQ99_04000"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9182338.1"
                     /translation="MRLSWQFLVAIAAIGAAPALSAQTITADGPVVYGHHHFNTTDMA
                     AQKRFFVETLGGKLATIGTNNLEVIEFPNVFLFFRPMQAPTGGTIGSTVNHIGFSVPD
                     LKPVVAKLKANGYKMITSESVAATVTVTGDIAAASPTTNIAFVLGAEDIKVELVEVKA
                     QAAPIQLHHVHFFGEKQAEMRAWYAKVFGAAAQPPNPNQAFVTAQLPGVTLSFTRSPT
                     TTVGTTGRALDHIGFEIDGLEAFTKKLEADGIPLTVSYRTVPALGLAIAFIQDPWGTN
                     IELTEGLDTID"
     gene            complement(1253..2101)
                     /locus_tag="VIQ99_04005"
     CDS             complement(1253..2101)
                     /locus_tag="VIQ99_04005"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY9182339.1"
                     /translation="MATGTCLCGALRYEIAGPFTMMMHCHCSMCRKHHGAVFATFVGA
                     ALAGFRWIQGQDAVASYKSSEQGTRMFCKHCGSVAPTPVPAMDLVIAPAGCLEGDLGI
                     KPQGHMFVASKAAWFPITDSLPQHAGMPQEYGGGMGVARPTVAQREGVADGSCLCGAV
                     AYEVRNPIRMYHCHCSRCRRARSAAHTTNLFAKVEDFAFTRGEELVQEYKVPEAARFG
                     VAFCTRCGGKVPRVSRERGVVVVPAGALDTDPLMRPQANIYVASKAPWFDITDGLPQY
                     AEMPPA"
BASE COUNT          411 a          767 c          685 g          342 t
ORIGIN      
        1 cgccgccgca aaggccgccg tggccgagac gttcatcaac aacggcgtcg ttcccgagga
       61 ccgcgaagat gccggcatga gccctgaccc cacggatacg cgcgggaaat acgtcagctc
      121 tgtcgaaatc cacgacggtc gcatcgacat cttgtacggc ggcgaggcca acagcatcat
      181 cgcgggccag gtgttgtcga tcacgccgta cggcaagctc ggcgatggag attcgtggtc
      241 ggtgctatgg cgctgcggcc acgcaccagt tccggacgga gcgactcacg agatcgcgcc
      301 gtacgaggtc accaacatcc agcagcaata cttgcccgcc gcatgtcggc cttgaagcaa
      361 cgcccctcga ccattccaag ggagagaccc cgatgagact atcctggcaa ttcctggtgg
      421 cgatcgccgc gatcggcgcg gcgccggccc tttcggcgca gacgatcacc gccgacggcc
      481 cggtcgtcta cgggcatcat catttcaata cgaccgacat ggccgcgcag aagcggttct
      541 tcgtcgagac gctcggcggc aagctcgcga cgatcggcac gaacaacctc gaggtcatcg
      601 agttcccgaa cgtgttcctg ttcttccggc cgatgcaggc gccgaccggc ggcacgatcg
      661 gcagcaccgt gaatcacatc ggcttctccg tgccggactt gaagcccgtg gtcgcgaagc
      721 tcaaagcgaa cggctacaag atgatcacga gcgagtcggt cgccgcgacg gtgacggtca
      781 cgggcgacat cgcggccgcg agccccacga cgaacatcgc gttcgtgctc ggggccgaag
      841 acatcaaggt cgagctcgtc gaggtgaagg ctcaagccgc gccgattcag ttgcatcacg
      901 tgcacttctt cggtgagaag caggccgaga tgcgcgcgtg gtacgcgaag gtgttcggcg
      961 cggcggctca gcccccgaat ccgaatcagg cgttcgtcac ggcgcagttg ccgggcgtga
     1021 ctttgagctt cactcgctca ccgacgacga cggtcggtac gacgggccgc gcgctcgatc
     1081 acatcgggtt cgagatcgac ggcctcgagg cgttcacgaa gaagctcgaa gccgacggga
     1141 ttccgctgac cgtgtcgtat cggaccgtgc ccgcgctcgg cctcgcgatc gcgttcatcc
     1201 aggacccctg gggcacgaac atcgagctga ccgaggggct cgatacgatc gactaggccg
     1261 gcggcatctc cgcgtactgc ggcaggccgt cggtgatgtc gaaccacggc gccttcgacg
     1321 cgacgtagat gttcgcctgc ggccgcatca gcgggtccgt gtccagcgcg ccggccggca
     1381 ccacgaccac gccgcgttcg cgcgacacgc gcggcacctt gccgccgcag cgcgtgcaga
     1441 acgccactcc gaaacgcgct gcctcgggca ccttgtactc ctgcacgagc tcctcgccgc
     1501 gcgtgaacgc gaagtcctcg accttcgcga acaaattggt cgtgtgtgcg gcgctgcgcg
     1561 ctctcctgca gcgcgagcag tggcagtggt acatgcgaat cgggttccga acctcgtagg
     1621 cgacggcgcc gcacaggcaa ctgccgtccg cgacaccctc gcgctgcgcg acggtcggcc
     1681 gcgccacgcc cattccgcca ccgtactcct gcggcatgcc cgcgtgctgc ggcaacgaat
     1741 ccgtgatcgg aaaccacgcg gctttcgagg ccacgaacat gtgcccctgc ggcttgatgc
     1801 cgaggtcgcc ctcgaggcag ccggccggcg cgatgaccaa gtccatcgcc ggaaccggcg
     1861 tcggcgcgac cgagccgcag tgcttgcaaa acatgcgagt gccctgctcg gacgacttgt
     1921 agctcgcgac cgcatcctga ccctggatcc agcgaaaccc cgcaagcgcc gcgccgacga
     1981 acgtcgcgaa cacggcgccg tgatgcttgc ggcacatcga gcagtggcaa tgcatcatca
     2041 tcgtgaacgg acccgcaatc tcgtagcgca aagccccaca tagacaggtt ccagtcgcca
     2101 tcgtccactc ccgttcttgc gccgccatcg acaacgatcc agaccccaag gacactacca
     2161 cgatggaccc acgcgaatct gcacccgacg ccgattgcgt cgtcg
//
LOCUS       DATCUD010000275         2118 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59401, whole genome shotgun sequence.
ACCESSION   DATCUD010000275 DATCUD010000000
VERSION     DATCUD010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59401"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1134
                     /locus_tag="VIQ99_04010"
     CDS             <1..1134
                     /locus_tag="VIQ99_04010"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182340.1"
                     /translation="TPLHRLQELSLETARLEGALSLAAGVSHDFNNLLTVLVGNLYLV
                     SEIVRTDAALHEKVRKARDAAKRGAALARQLLDVARGADTEFGEVVVNPRQVIESLSP
                     LLKTVLGTRIAVKTVLGHSVPAVNVNRAQLESVVTNLVINARDAIPEGRAGTVTITVG
                     KPEIPAAGVTRIKAGSYVAITVADDGCGIAPELVERVFEPFFSTKGKTKGSGLGLPMV
                     RWFAEKAGGGVILKSRPGEGTAVTVLLPAQHAEAAETMGFTMPLSSLPSGNEQVIVLS
                     DDDEFRTTVEQILSTLGYRTALRDGGNNDSALRAVVIVDAQASRTTTAERIYALVRRQ
                     GAALGVVVIGDCQADWPTAPVTIPKPFTLPELAKAVRTAAEGV"
     gene            1137..>2118
                     /locus_tag="VIQ99_04015"
     CDS             1137..>2118
                     /locus_tag="VIQ99_04015"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing response regulator"
                     /protein_id="HEY9182341.1"
                     /translation="MPQKDPVLLALDDEEEVAETICAIGARAGFRTVSSTAPAQIREL
                     VEASSPDVIVLDLQMPGLDGVSALRHLADARSAAKIFLVTGMDERTIAAAEQYGLHRG
                     LAIFGTVQKPFDPDELLERFERAHAAIRPLTATDLEQAIANDELVVHYQPIIRRFADN
                     TWDIAAVEALLRWNHPIRGLLTPDSFVSMGEAHGLSRAMTDFVLQRGIEQLKGWEAQR
                     LRMGLRINVASTLISDIAFPDRLEAMLVEQALDPESLALEITETAMLEQTPDAFDILT
                     RLRIKNIGLAIDDFGIGYSSLTQLFRMPFNEMKIDRSLVGRIVESKEASIM"
BASE COUNT          413 a          692 c          644 g          369 t
ORIGIN      
        1 acgccactgc atcgcctcca ggaattgtcg ctcgagacgg cccgactcga aggggcgttg
       61 agtctcgcgg ccggagtctc tcacgacttc aacaatctcc taacggtgct cgtcggcaat
      121 ctgtatctcg tgtcggagat cgtcagaacg gatgctgcac tgcacgagaa ggtacgcaaa
      181 gcacgcgacg ccgcaaagcg tggtgcggcg ctcgcgcggc agcttctcga tgtcgcaaga
      241 ggtgccgata ccgagtttgg cgaagtggtc gtcaaccctc gacaggttat cgaatcgctg
      301 tcgcctcttc tcaagaccgt actcggaacc cgcattgcgg tcaaaaccgt tctcggccac
      361 agcgttcccg cggtgaacgt caatcgggcg cagctcgaga gcgtcgtcac caacctcgtc
      421 atcaacgcgc gcgacgcgat tcctgagggg cgagcgggga ccgtcacgat caccgtcggc
      481 aaaccagaga tccccgcggc cggcgtgacg agaatcaagg ccggctcgta cgtcgcaatc
      541 acggtcgccg atgacggctg tgggattgct ccagagctcg tcgagcgcgt gttcgagccc
      601 ttcttctcca cgaagggcaa gaccaagggc agtggcctgg gactgcctat ggtccgctgg
      661 ttcgccgaaa aggccggcgg cggagtgata ctcaagagtc gccccggcga aggaaccgcg
      721 gtcaccgtct tgttaccggc gcagcacgct gaggcagccg agacgatggg cttcacgatg
      781 ccgttgtcgt cgctcccgag cggcaacgag caggtgatcg tcctctcgga cgacgacgag
      841 tttcgcacga cggtagagca gatcctgagc acgctgggat accgtaccgc gctgcgagac
      901 ggcggcaaca acgatagcgc actccgcgct gtcgtcatcg tcgacgcgca agcgtcccgg
      961 acgacgacgg ccgagcgaat ctatgcgctc gtccgccgtc aaggcgcggc acttggagtc
     1021 gtcgtgatcg gcgactgcca ggccgactgg ccaaccgcac cggtgacgat tccgaagccg
     1081 ttcactctgc ccgagctcgc caaagcggtt cgcaccgcgg ccgaaggagt ctgaccatgc
     1141 cccagaagga tcccgtgctc ctcgcactcg acgacgaaga ggaagtcgca gaaacgattt
     1201 gcgccatcgg cgcccgggca ggcttccgta ccgtttcgtc cacggcgccc gcgcagatcc
     1261 gcgagctcgt cgaggcatcg agccccgacg tcatcgttct cgacctccag atgcccggtc
     1321 tcgacggtgt cagcgcattg cggcacctcg ccgacgcgcg ctcggccgcg aagatcttcc
     1381 tcgtgaccgg aatggacgag cgcacgatcg ccgcggcgga gcaatacggc ctgcatcgcg
     1441 gcctcgctat tttcggcacg gtccagaaac ccttcgatcc cgacgagctc ctcgagcgct
     1501 tcgagcgcgc gcatgcggcc attcgcccct tgacggctac cgacctcgag caggccatag
     1561 cgaacgacga gttggtggtc cactaccaac cgatcatccg ccggttcgcg gacaacacct
     1621 gggacatcgc cgcagtcgaa gccctactgc gctggaacca tccgatccgt ggtctgctga
     1681 cccccgattc gttcgtctcg atgggcgagg ctcacggttt gagtcgcgca atgaccgact
     1741 tcgtgctcca acgcggcatc gaacagctca aaggatggga ggcgcagcgc ctgagaatgg
     1801 gcctaaggat caacgtcgcc tcaacgctga tttccgacat cgctttcccg gatcgtctcg
     1861 aagcaatgct cgtcgagcag gctctcgatc ccgaaagcct ggcgctcgag atcacggaga
     1921 cggcgatgct cgagcaaacg ccggacgcgt tcgacattct cacgcggttg cggatcaaga
     1981 acatcggtct cgcgatcgac gacttcggca tcggctactc ctctctgacg caactgttcc
     2041 gaatgccgtt caatgaaatg aagatcgatc ggtctttggt cggcagaatc gtcgaatcca
     2101 aggaagcgtc gatcatgg
//
LOCUS       DATCUD010000276         1684 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66801, whole genome shotgun sequence.
ACCESSION   DATCUD010000276 DATCUD010000000
VERSION     DATCUD010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1684
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66801"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..92)
                     /locus_tag="VIQ99_04020"
     CDS             complement(<1..92)
                     /locus_tag="VIQ99_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019182580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EtfB protein"
                     /protein_id="HEY9182342.1"
                     /translation="MVGVKRVVDYNVRVRVKPDGSGMAIEGLKM"
     gene            185..1039
                     /locus_tag="VIQ99_04025"
     CDS             185..1039
                     /locus_tag="VIQ99_04025"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014065894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY9182343.1"
                     /translation="MNASPLIDVATLARNRTRPDWIVVDCRFTLTQPAAGRASYDKGH
                     IPGARYAHLDEDLSRKPGPAEGRHPLPDPAAFAATLGAWGIEPGHTVIAYDEGSGAIA
                     ARLWWLLRWLGHDRCAVLDGGFAAWVEAGHDVESHAPNVAARRYPVPEPRTDLVVTSR
                     DLAAQQAAGAVVVDARAAARYTGEQETIDPVAGHVPHARNRPFSSNVTPSGRFRPPGE
                     LRRELLELLAGREPSRLIAMCGSGVTACQLLLAMEVAGLAGGRLYAGSWSEWIRDPSR
                     PLAKGADR"
     gene            1117..>1684
                     /locus_tag="VIQ99_04030"
     CDS             1117..>1684
                     /locus_tag="VIQ99_04030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018972234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9182344.1"
                     /translation="MRGITVLRQTHEIEASSQLKHVRYEIRGKLARRAHELERQGYEI
                     VQLNIGNPGLFGLRTPETMRLAMIENLPSAEAYCNQKGIFPAREAVVMQQQARGIDGV
                     DADHVFMGNGVSELIDLTLRGLLNAGDEVLIPSPDYPLWTAATVLNGGRAVYYPCPES
                     QGFNPDPDAVEKLITPRTRAIVIINPNNP"
BASE COUNT          287 a          569 c          561 g          267 t
ORIGIN      
        1 ctcatcttca ggccttcgat cgccataccc gagccatcgg gcttgacgcg cacgcgcacg
       61 ttgtagtcga cgacgcgttt gaccccgacc atgatcgttt gcaagcgacg gctccgacga
      121 agaatttcgc gcgagattct agcaacagcg gtgcgagccg actgtgaatc gctacaatcc
      181 gaccatgaac gccagcccgc tgatcgatgt cgccacgctc gcacgcaatc gcacgcgtcc
      241 cgattggatc gtcgtcgatt gtcgtttcac gctgacccag ccggcggcgg gccgtgcctc
      301 gtatgacaaa gggcacattc caggcgcgcg ctatgcgcac ctcgacgagg acctgtcgcg
      361 gaagcccggc ccagccgaag gccggcatcc gttgccggac cccgcggcgt tcgccgcgac
      421 actcggcgct tggggcatcg agcccggcca caccgtgatc gcgtacgacg aaggcagcgg
      481 cgcgatcgcc gcgcgtctat ggtggctgct gcgctggctc ggccacgacc gctgcgccgt
      541 gctcgacggc ggcttcgcgg cgtgggtcga ggccgggcac gacgtcgagt cgcacgcgcc
      601 gaatgtcgcc gcacggcgct atccggtgcc ggagccacgc acggacctcg tggtgacgag
      661 ccgcgacctg gcggcgcagc aggccgccgg tgccgtcgtg gtcgatgccc gcgcggccgc
      721 gcgctatacg ggcgagcagg aaacgatcga ccccgtggcg ggacacgtgc cccacgcgcg
      781 gaatcggccg ttctcgagca atgtcacgcc gagcggccgc ttccggccgc ccggcgagct
      841 gcgccgagag ctgctggagc tcctggcggg ccgcgagccg agccgcttga tcgcgatgtg
      901 tggctcggga gtcacggcgt gccaactgct gttggccatg gaagtcgcgg gtctggccgg
      961 aggccgcctg tacgccggtt cctggagcga atggattcgc gacccctccc ggccgctagc
     1021 caagggcgcc gatcgctaga acgcaggctc gtcgccgtaa actggtatgc gggcgcttgg
     1081 ccgacggcgc tgggcgtggt aagagagagc tgttttttga gaggtatcac cgtgttgcgc
     1141 cagacccatg agatcgaagc gagctcccag ctcaagcatg tccggtacga aatccgcggc
     1201 aagctcgctc ggcgcgccca tgagctcgag cgccaaggct acgaaatcgt ccagctcaac
     1261 atcggcaatc cgggcctgtt cggcttgcgc acacccgaaa ccatgcgtct cgcgatgatc
     1321 gagaatttgc cgtcggccga ggcgtactgc aaccagaaag gcatctttcc ggcgcgcgag
     1381 gccgtcgtga tgcagcagca ggcgcgcggc atcgacggcg tcgacgcgga tcacgtgttc
     1441 atgggcaacg gtgtcagcga attgatcgat ctcacgttgc gcgggctctt gaacgcgggc
     1501 gacgaggtcc tgatcccgag ccccgactac ccgttatgga cggcggccac agtgctgaac
     1561 ggcggtcgag ccgtgtatta cccgtgcccc gagtcgcagg gcttcaaccc cgaccccgac
     1621 gcggtcgaga agctgatcac gccgcgcaca cgcgcgatcg tgatcatcaa cccgaacaat
     1681 ccga
//
LOCUS       DATCUD010000277         4107 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66824, whole genome shotgun sequence.
ACCESSION   DATCUD010000277 DATCUD010000000
VERSION     DATCUD010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4107)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4107)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4107
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66824"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VIQ99_04035"
     CDS             complement(<1..226)
                     /locus_tag="VIQ99_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011630593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182345.1"
                     /translation="MKPLVLVDGSSYLYRAFHALPPLSTAKGQPTGAVLGVVNMLYKL
                     LDEERPERMAVVFDAPGKTFRADLYAEYKAN"
     gene            complement(407..1603)
                     /gene="argH"
                     /locus_tag="VIQ99_04040"
     CDS             complement(407..1603)
                     /gene="argH"
                     /locus_tag="VIQ99_04040"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY9182346.1"
                     /translation="MPRLWDKGLPLDDLILRFTAGEDHRLDERLVAYDVRATIAHARM
                     LEKQGLLSTADCAAICAGLEALASAHAAGEWSIELADEDAHSALERRLTERIGEAGGR
                     VHLGRSRNDQVLVALRLYLRDAIDDLAAGTAAVIAALERVATEQGTIALPGYTHMQPA
                     MPSSVALWAKGFAAELADDRDGLQRARTRAEQNPLGSAAGYGVPNLPLDREATRAALG
                     FERTQEPVTAVQLSRGKAEASLVFEIALVLGDLGRLASDLLLFYTSEFAYVTLPAEMT
                     TGSSIMPQKRNPDVFELVRGAQATVTGALQEILGLTAKLTSGYHRDLQRLKAPLFRSV
                     DLAGDVLAIMAHALPNVRFRPENITLGPELYAAEQANELVVKEGLPFREAYRRIAARL
                     KNKGDR"
     gene            complement(1607..2536)
                     /gene="argB"
                     /locus_tag="VIQ99_04045"
     CDS             complement(1607..2536)
                     /gene="argB"
                     /locus_tag="VIQ99_04045"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEY9182347.1"
                     /translation="MTTRLNLNERALVITALRHALPYLRVFKHKIFVLKAGGDAFVSN
                     ETTRALMEQIGILHQVGIRVVLVHGGGPQSTALSKRLGLATQMVEGRRVTDAQTLEVS
                     TMVLNGEINTRIVAQCRALDIPAIGISGVDGALVKASKRPPVQVGGQTIDYGFVGDIF
                     GIDPTIILKQLDNNLVPIVSPLSADDSGTLLNINADTVAAMLACELKAEKFIMATGTP
                     GILESLEDPRSLISYIDRAGLRRLRDEGKLSGGMLPKVAAIERALSGGVPRVHVISYT
                     QTDSLLLEVFTNEGTGTLVVNDTKALRPEEQTS"
     gene            complement(2543..3541)
                     /locus_tag="VIQ99_04050"
     CDS             complement(2543..3541)
                     /locus_tag="VIQ99_04050"
                     /EC_number="2.1.3.9"
                     /inference="COORDINATES: protein motif:HMM:NF003384.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_function: GO:0043857 - N-acetylornithine
                     carbamoyltransferase activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylornithine carbamoyltransferase"
                     /protein_id="HEY9182348.1"
                     /translation="MRRFNDLADFSREEIKDLITLAARLDAKPEPRALEGKVLSLLFL
                     SPSLRTLSSFQAAMVRLGGGSFVISPDMSIHGLESRAGIVMDGAAAEHVREAIPVIAS
                     YGDAMGVRAFAERRDLAHDLGDADFKALTSLIDKPWINMESAIDHPCQSLADWKTMDE
                     LAIPENGKLVLSWAYHPRALPLAVSAATIHMAAKRGMNIVHLRPEGFELPPAVMDKAR
                     KAAAESGGSISETTDRREAMEGAHVIYAKSYSSTRHYGDKLGDQALREELVHWCVDEP
                     WFSSARPDCKFMHCLPVRRGVEVADRVLDGPRSTVIKGARNRLYAQMAVLYRMMKG"
     gene            complement(3528..>4107)
                     /locus_tag="VIQ99_04055"
     CDS             complement(3528..>4107)
                     /locus_tag="VIQ99_04055"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9182349.1"
                     /translation="HPSFPHAIRAACDRHGALMIIDEVQTGMGRLGAPFGAQLYGVRP
                     DLLTVAKGLGGGFPCGAVLMPHTIASTLKAGMLGTTFGGGPVACAAIKTVIDVIERDH
                     LCANVRDVSAAIRTACRVGPVESIQGRGFLLGLKTRPKAAQVRDALLARDILVGTSAD
                     PHMLRLLPPLILSKDHVQRLAAALEDLTDAPL"
BASE COUNT          658 a         1359 c         1397 g          693 t
ORIGIN      
        1 ggttggcctt gtactccgca tacaggtcgg cacggaacgt cttgcccggt gcgtcgaaga
       61 cgacggccat gcgttccggg cgctcctcgt cgagaagctt gtagagcatg ttgacgacgc
      121 cgagtaccgc gccggttggc tgccccttgg ccgtcgacag cggcggcaac gcgtgaaacg
      181 cgcgatacaa atacgacgag ccgtcgacga gaacgagcgg tttcacgggc tcactcccgt
      241 tcggcgtcgt cttggggctc cggttcgccg gacgccggct gagccggctc cacgggtcgt
      301 gcgtcgggtg gcagcacgag cgggccctgc tggccacagc tgacggagcc cgcaaccaga
      361 atcgcggtga cggccgcggc acgtagctca cgcagcgagg ggctcctcat cgatcgcctt
      421 tgttcttgag tcgcgccgcg atgcggcgat atgcctcgcg aaacggcagc ccttccttga
      481 cgacgagctc gttggcttgc tcggcggcgt agagctccgg gccgagcgtg atgttctcgg
      541 gccggaagcg aacgttcggc agcgcgtgcg ccatgatcgc gagcacgtcg ccggcgagat
      601 cgacgctgcg gaacaggggc gccttcaggc gctgcaggtc gcggtgatag cccgacgtca
      661 gcttcgccgt gaggccgaga atctcctgca acgcgccggt cacggtggcc tgggcgccgc
      721 gcacgagctc gaaaacatcc gggttgcgct tttgcggcat gatcgacgat cccgtggtca
      781 tctcggcggg cagcgtgacg tacgcgaatt cactcgtgta gaacagcaac aggtcggacg
      841 cgaggcggcc gaggtcgccg agcacgagcg cgatctcgaa aacgagcgag gcttcggcct
      901 tgccgcgcga tagttgcacc gccgtcacgg gctcttgcgt gcgctcgaag ccgagcgctg
      961 cacgcgtggc ttcgcggtcg agaggcaagt tcggcacgcc gtagcccgcg gccgacccca
     1021 aggggttctg ttccgcgcgc gtgcgggcgc gctgcaatcc gtcgcggtcg tcggcgagct
     1081 cggccgcgaa gcccttcgcc cacagtgcga ccgagctcgg catcgccggc tgcatgtgcg
     1141 tgtagccggg cagcgcgatg gttccctgct cggtggccac gcgctccagc gccgcgatga
     1201 cagcggcagt gcccgccgcg aggtcgtcga tcgcgtcgcg caggtacaac cgcagcgcga
     1261 ccagcacttg atcgttgcgc gaacggccga ggtgcacccg gccgccggcc tcgccgatgc
     1321 gttccgtgag acggcgctcg agcgcgctgt gggcgtcctc gtcggcgagc tcgatcgacc
     1381 attcgccggc cgcgtgcgca gacgccagcg cttcgaggcc ggcacagatc gcggcgcagt
     1441 cggccgtgct gagcaagcct tgcttctcga gcatgcgtgc atgcgcaatc gtggcgcgta
     1501 cgtcgtacgc gacgaggcgc tcgtcgaggc gatggtcctc gccggccgtg aagcgcagga
     1561 tcaggtcgtc gagcggcagg cccttgtccc acagccgcgg catggctcag ctcgtctgct
     1621 cttcgggccg cagagccttc gtgtcgttga cgacgagcgt gcccgtgccc tcgttcgtga
     1681 acacttcgag caacaggctg tcggtttgcg tgtaggagat cacgtgcacg cgcggcacgc
     1741 cgcccgacaa cgcgcgctcg atcgccgcaa ctttcggcaa catgccgccc gagagcttgc
     1801 cctcgtcgcg aaggcgcctg agccccgcac ggtctatgta ggaaatcagc gagcgcggat
     1861 cctcgagcga ctcgagaatg ccgggcgtgc ccgtcgccat gatgaacttc tcggccttga
     1921 gctcgcaggc cagcatcgct gcgacagtgt ccgcgttgat gttcagcagc gtaccgctat
     1981 cgtcggccga cagcgggctc acgatcggca cgaggttgtt gtcgagctgt ttcaggatga
     2041 tcgtggggtc gatgccgaag atgtcgccga cgaacccgta gtcgatcgtc tggccgccca
     2101 cctgcaccgg cggccgcttg ctcgccttta cgagcgcgcc gtcgacgccg ctgatgccga
     2161 tggccggaat gtcgagcgcg cggcattggg ccacgatccg cgtgttgatc tcgccgttca
     2221 gcaccatcgt cgacacttcg agcgtctgcg cgtcggtcac gcgtcggccc tccaccatct
     2281 gcgtcgcgag tccgaggcgc ttcgacagcg ccgtcgactg ggggccgccg ccgtgcacga
     2341 gcacgacacg gatgccgacc tgatgcagga tgccgatctg ctccatcaga gcgcgcgtgg
     2401 tctcgttcga cacgaacgcg tcaccgccgg ccttcaagac gaaaatcttg tgcttgaaca
     2461 cgcgcagata gggaagcgcg tgccgcagcg ccgtgatcac gagcgcgcgt tcgttgaggt
     2521 tgagtcgcgt agtcatgtcg tcttagccct tcatcatgcg gtaaagcacg gccatttgcg
     2581 cgtacagacg gttgcgcgcg cccttgatca ccgtgctgcg cgggccgtcg agaacccggt
     2641 cggcaacttc gacgccgcgc cgcaccggca agcagtgcat gaacttgcag tcgggccggg
     2701 cgctcgagaa ccatggctcg tcgacgcacc agtgcacgag ctcctcgcgc agcgcctggt
     2761 cgccgagctt gtctccgtag tggcgcgtcg aggagtacga cttcgcgtag atcacgtgag
     2821 cgccttccat ggcctcgcgc cggtccgtag tctcgctgat gctgccgcca gactcggcgg
     2881 cggccttgcg cgccttgtcc atgacggccg gtggcagctc gaagccttcc gggcgcaaat
     2941 gcacgatgtt catgccgcgc ttcgcggcca tgtgaatcgt ggctgccgac accgcgagcg
     3001 gcagcgctcg cgggtgatac gcccacgaca acacgagctt gccgttctcg gggatcgcca
     3061 gctcgtccat ggtcttccag tctgcgaggc tctgacatgg gtgatcgatg gcggactcca
     3121 tgttgatcca cggcttgtcg atcaggctcg tgagggcctt gaaatcggcg tcgccaagat
     3181 cgtgtgcgag atcgcgccgc tcggcgaacg ctcgcacgcc catcgcgtcg ccgtacgacg
     3241 cgatcacggg aatcgcctcg cggacgtgct cggccgccgc gccatccatg acgatgccgg
     3301 cgcgcgactc gagaccgtga atcgacatgt cgggcgagat cacgaacgaa ccgccgccga
     3361 gccggaccat cgcggcctgg aacgacgaca gcgtgcgcag cgaggggctc aagaacagca
     3421 acgaaagcac cttgccctcg agcgctcgag gctccggttt cgcgtcgaga cgcgccgcga
     3481 gagtaatcaa atccttgatt tcctcgcgcg agaaatcggc caggtcgtta aagcggcgca
     3541 tcggtcaggt cctccagggc ggcagccaat cgttgtacgt gatctttgga cagaatcagc
     3601 ggcggcagca gtcgcaacat gtgcgggtcg gcgctcgtgc cgaccaggat gtcgcgtgcg
     3661 agcagcgcgt ccctgacttg agccgccttc ggacgcgttt tgagcccaag caggaacccg
     3721 cggccttgaa tgctttcgac ggggccgact ctgcaggcgg tgcgaattgc cgcgctgacg
     3781 tcgcgcacgt tcgcgcacaa atgatcgcgc tcgatcacgt cgatcacggt cttgatcgcg
     3841 gcgcaggcga cggggccgcc gccgaacgtc gtgccgagca tgccggcctt cagcgtcgac
     3901 gcgatggtgt ggggcatcag gactgcgccg cacgggaagc cgccgcccaa gcccttcgca
     3961 accgtgagca agtcggggcg cacgccgtag agctgggctc cgaacggagc gccgaggcgg
     4021 cccatgccgg tttggacctc gtcgatgatc atcagcgcgc cgtggcgatc gcaggccgcg
     4081 cgaatcgcgt gcgggaacga aggatgg
//
LOCUS       DATCUD010000278         2235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9761, whole genome shotgun sequence.
ACCESSION   DATCUD010000278 DATCUD010000000
VERSION     DATCUD010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9761"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..449
                     /locus_tag="VIQ99_04060"
     CDS             <1..449
                     /locus_tag="VIQ99_04060"
                     /inference="COORDINATES: protein motif:HMM:NF012799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY9182350.1"
                     /translation="GVSAAEGCAAYAGVPLTLRGVSQAVLLTTGHTRDDGTPDFSEFR
                     PGQTLALYMGVSQYAEISAALIKNGHAPDTPCAIVESGTTDRQRVVRTTLADLAAAQA
                     ALDVRPPALLIVGETTRYAERFSWFAPSTVVHFATESAPARARVSY"
     gene            472..1434
                     /gene="cysK"
                     /locus_tag="VIQ99_04065"
     CDS             472..1434
                     /gene="cysK"
                     /locus_tag="VIQ99_04065"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009725378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEY9182351.1"
                     /translation="MIYESILDTIGNTPVVKLNRIAPKHVTIYVKIEAFNPLGSVKDR
                     LAFAIIDDAEKRGVLKPGQTVVEATSGNTGIALAMVCAAKGYPFVATMVETFSIERRK
                     IMRALGAKVILTPAAERGTGMVRLAATLAEKHGWFLARQFQNPANPAYHRQTTGPEIL
                     RDFANRRLDFWVTGWGTGGTLTGAGEVIKLARPEVKIIATEPAGASLLGGKTWAPHKI
                     QGWTPDFLPDVLNPKVFDQLLPVTDEEGKNMARRLAREEGIFVGISAGATLAAAFKAA
                     ETAKPGSVLLAMLPDTGERYLGTYLFDDVKEGSDDEWLASLDKK"
     gene            complement(1450..1540)
                     /locus_tag="VIQ99_04070"
     tRNA            complement(1450..1540)
                     /locus_tag="VIQ99_04070"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1504..1506),aa:Ser,seq:gct)
     gene            complement(1667..1879)
                     /gene="csrA"
                     /locus_tag="VIQ99_04075"
     CDS             complement(1667..1879)
                     /gene="csrA"
                     /locus_tag="VIQ99_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008284595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HEY9182352.1"
                     /translation="MLILTRRVGETVVIGNDVTVTVLGVKGNQVRLGVNAPREVAVHR
                     EEIFERIKREQNEEKTRLHLNGAAHP"
BASE COUNT          398 a          744 c          710 g          383 t
ORIGIN      
        1 ccggcgtgtc ggcggccgaa ggctgcgccg cgtacgcggg cgtcccactc acgctgcgcg
       61 gcgtgtcgca agccgtgctg ctgacgacgg gccatacgcg cgacgacggc acgccggact
      121 tttccgagtt ccggccgggc cagacgctgg cgctgtacat gggcgtgtcg cagtacgcgg
      181 agatcagcgc cgcgctgatc aagaacggtc acgcgccgga cacgccgtgc gcgatcgtcg
      241 agagcggcac cacggaccgg cagcgcgtcg tgcgcactac gctcgccgac ctcgcggcgg
      301 cgcaggcggc cctcgatgtg cgtccgccgg cgctattgat cgtcggcgaa actactcgct
      361 atgcggaacg tttcagctgg ttcgcgccga gcacggtcgt ccacttcgcg acagaatcgg
      421 cgccggcgcg cgctcgtgta agctactgac caacaccaag aaggcaccgc catgatctac
      481 gagagcatcc tcgacaccat cggcaatacc ccggtcgtca agctgaatcg gattgcaccg
      541 aagcacgtga cgatctacgt gaagatcgag gcgttcaatc ctctgggctc ggtcaaggat
      601 cgtttggcat tcgcgatcat cgacgacgcc gagaagcgcg gcgtgctgaa accggggcag
      661 acggtcgtcg aggccacgtc cggcaacacc ggcatcgcgc tcgcgatggt atgcgcagcg
      721 aagggctacc cgttcgtcgc aacgatggtc gagacgttct cgatcgagcg gcgcaagatc
      781 atgcgcgcgc tcggcgcgaa ggtgatcctg acaccggccg ccgagcgcgg cacgggcatg
      841 gtacggctcg cggcgacgct ggccgagaag catggctggt ttctcgcgcg gcagttccaa
      901 aaccccgcga acccggctta ccatcgccag acgaccggcc ccgagatcct ccgggacttc
      961 gcgaaccgcc ggctggattt ctgggtcacg ggctggggca ccggcggcac gctcacgggc
     1021 gccggcgagg tcatcaagct cgcgcggccc gaggtcaaga tcatcgcgac cgagcccgcg
     1081 ggcgcatcgt tgctcggcgg caagacgtgg gcgccgcaca agatccaggg gtggaccccg
     1141 gacttcctgc ccgatgtgct gaacccgaaa gtgttcgatc agctcctgcc cgtgaccgac
     1201 gaggaaggca agaacatggc gcggaggctc gcacgcgagg aaggcatttt cgtcggcatc
     1261 tcggccggcg cgacactcgc ggccgcgttc aaagcggccg agaccgcgaa gccgggctcg
     1321 gtgctgctcg cgatgttgcc cgacaccggc gagcgctatc tcggcacgta tctgttcgac
     1381 gacgtcaagg aaggctccga cgacgagtgg ctcgctagct tggacaaaaa ataagcagcg
     1441 ctgaggaatt ggcggagaga gagggattcg aaccctcgaa gggcttttgg cccttacacc
     1501 cttagcaggg gtgcgccttc gaccactcgg ccatctctcc gtgatgcggg caagtcgttt
     1561 gcgggagtga ttctactcag gggacgcgag aatcgcgacg cccacgcttg ggctcgcgtg
     1621 attccgaatc gacgaaccgg gcctcgagcc ccggcatcac ccgcgactac gggtgcgcgg
     1681 cgccgttcag atgcagtcgc gttttttctt cgttttgctc gcgcttgatg cgttcgaaaa
     1741 tctcttcgcg atgcacagcg acttctcgcg gtgcattcac gccgaggcgc acctggttgc
     1801 ctttcacacc cagtacggtc acggtgacat cgttgccaat caccaccgtt tcccccacgc
     1861 gccgggtcaa gatcagcata gccaactcct tctcggcctg ctcaccgtcc cgttgctctc
     1921 gccacttctg gcgggctcgt tgttattacg ggtacggcat tcgcccctca cccacgacga
     1981 cgctcccgca cacgcgtgcg gacgcctcga tcgcgagcgt ccgtggctac cggcctgttg
     2041 ttttcaaatt tctggccggt ccccccggtt cgtaagtccc cctgcggcaa cccacgaccc
     2101 gcgctgatag tagcccaaaa acccaggata ttcctaagtt ttctgggcag ggccggattt
     2161 agacaaactc caggggctag gccgcctgga tcaacccagg cacgagcgcg agcgccgcat
     2221 cgatttgatc gggcc
//
LOCUS       DATCUD010000279         1884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31242, whole genome shotgun sequence.
ACCESSION   DATCUD010000279 DATCUD010000000
VERSION     DATCUD010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31242"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(46..582)
                     /locus_tag="VIQ99_04080"
     CDS             complement(46..582)
                     /locus_tag="VIQ99_04080"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY9182353.1"
                     /translation="MTTAHSDFSALIAPHLAALFRSAYRLTGNRPDAEDLVQEVCMRA
                     YAEIGTLRSFEQPKGWLFKVAYRAFLDGVRRRARSRVGATGEDFDATRFSDGPTPEET
                     TEAELAERRLLDAFGRLDRDQRALLALHVEGHTLAELQAITDLSTDVLKARLYRARVR
                     LGRLLAAETPAPALALEK"
     gene            1011..>1884
                     /locus_tag="VIQ99_04085"
     CDS             1011..>1884
                     /locus_tag="VIQ99_04085"
                     /inference="COORDINATES: protein motif:HMM:NF014741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF222 domain-containing protein"
                     /protein_id="HEY9182354.1"
                     /translation="MLLAYALDAPAARVEERCRQIRNAQPESIHSARRVWQRRALSVW
                     RDEAHGTMRLTVEVPIEEGELIVRALDCAVAAGEVSNDVDPDSIGESKGTAWCAQQAD
                     AFVAVAKAYLDGGGDREGSTADHYQVVVHVDEKSLRGGAGRADLPIATVKRLLCDCSL
                     VTVVEGANGEPLDVGRKQRTASTSLKRALYARDRGCTFPGCHRTRYLDGHHLEHWIHG
                     AETNAENMALLCTYQHRLLHEGAYRITKQTDGTVRFVTADGRTIPRGGYRLEDFVADD
                     VGAGSESPSAEGFCT"
BASE COUNT          320 a          559 c          656 g          349 t
ORIGIN      
        1 gcgcggtggt cgtcgagtat tacggcaact tcgttgcagt tcatttcatt tctccagtgc
       61 gagcgcgggg gccggtgtct cggctgcgag caaccttccg aggcgcacgc gggcgcggta
      121 gaggcgcgct ttcagcacgt cggtggatag atccgtgatc gcttgcagct ctgcgagcgt
      181 gtggccctcg acgtgcagcg cgagcagagc gcgctggtcg cggtcgagcc ggccgaacgc
      241 atcgagcaga cgtcgctcgg cgagctcggc ttccgtggtc tcctcgggcg tagggccgtc
      301 gctgaaacgt gtggcgtcga agtcctcacc ggtcgctccc acacgcgaac gtgcgcggcg
      361 gcgcacgccg tccaagaacg cgcggtaggc aaccttgaac agccagccct tcggttgctc
      421 gaacgagcgc agcgtgccga tctcggcata cgcccgcatg cagacctctt gcacgaggtc
      481 ctccgcatcg gggcgattgc ccgtgagccg gtaggccgag cggaacagcg ccgcgaggtg
      541 cggtgcgatc agagccgaga agtcggagtg tgccgtcgtc atgctgttcc gctcgtggtc
      601 agtacctaac acgtcggagg ccggcagcgg taacgggtgg ggtcgatggt tcagccgcgc
      661 gggtggttcg tgagtccgcc gtcgaggact gagaaaatct ctgctaaata gctgattatt
      721 attggcatcc tgacgtacgg ctggatatat catcagcatc cccgccacgc ttattcagga
      781 gccggtcatg agcgcctatc gtcgcgttct gcgttcgagt cgtcgggtca tggtgttgtc
      841 gatgccgagc tctcggtcga cgagatcgac gccgcaatcg gccggctcgt ccggcagatg
      901 aatgccgaga gctatcgaat gctcgtgctc gttcgggact tcgacgatcc cttcggttac
      961 gcgaagaggt acgggcgctg acgcgcgtcg cgcgcgagca cgacgaggat ttgctgctgg
     1021 cctacgcgct cgatgcgcct gcggcacggg tcgaggagcg ctgccggcag attcgcaacg
     1081 cgcagccgga atccatccac tcggctcgac gggtgtggca gcggcgcgcg ctgagtgtgt
     1141 ggcgcgacga agcgcacggc acgatgcgtt tgaccgtaga ggtgccgatc gaggaaggcg
     1201 agctgatcgt gcgtgcgctg gattgcgctg tcgccgccgg tgaggttagc aacgacgtcg
     1261 atcccgattc gatcggtgag tcgaagggca ctgcgtggtg cgcgcaacag gccgatgcgt
     1321 tcgtcgcggt tgcgaaggcg tatctcgatg gaggtggcga tcgcgagggt tcgaccgccg
     1381 atcattacca agtcgtcgtc catgtcgacg aaaaatccct ccgcggaggg gccggacgtg
     1441 cggatctgcc gatcgccacg gtgaaacgcc tgttatgcga ttgcagcttg gtgacggtcg
     1501 tcgagggcgc gaacggcgag ccgctcgacg tcggccgcaa gcaacgcacc gcgtcgacgt
     1561 ctctaaagag ggcgctatat gcgcgcgatc gcggctgcac gttcccggga tgtcaccgca
     1621 cgcggtatct cgatgggcat catctcgagc actggatcca tggcgccgag acgaacgccg
     1681 agaacatggc attgctgtgc acgtatcagc accggctgtt gcacgagggg gcgtatcgga
     1741 tcacgaaaca gaccgatggt accgtgcgct tcgtcactgc cgacggacgc acgattccac
     1801 gcggcgggta tcggctcgaa gatttcgtcg ccgacgatgt cggcgcaggc tcagagagtc
     1861 cctccgcgga gggattttgc accg
//
LOCUS       DATCUD010000280         2693 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9782, whole genome shotgun sequence.
ACCESSION   DATCUD010000280 DATCUD010000000
VERSION     DATCUD010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9782"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /gene="map"
                     /locus_tag="VIQ99_04090"
     CDS             complement(<1..624)
                     /gene="map"
                     /locus_tag="VIQ99_04090"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014036515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEY9182355.1"
                     /translation="MITIKTPEEQDKMRVAGRLAAQVLDMIGPHVQAGVATEELDRLC
                     HDYIVNDLGSIPAPLNYRGSAGTTPFPKSICTSINHVVCHGIPSDRILRNGDIVNIDI
                     TVIKDGYHGDTSRMFFVGPPSIMAERLTRACFEGMWRGIRAVRPGGRLGDIGHAIQTF
                     IEEQRFSVVREYCGHGIGRVFHEDPQVLHYGRPGTGVELVPGMTFTVE"
     gene            858..1730
                     /gene="rpsB"
                     /locus_tag="VIQ99_04095"
     CDS             858..1730
                     /gene="rpsB"
                     /locus_tag="VIQ99_04095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014402202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEY9182356.1"
                     /translation="MADVTMRRMLEAGVHFGHQTRFWNPKMAPFIFGERNKIHIINLE
                     ETMPLYKAASEFVRKLVADGGTLLFVGSKRAAREAIATEAVRCGMPYVTQRWLGGMLT
                     NFKTIRQSIKRLKTLEEITEPGAVVNFTKKELLKLGREKEKLEKTLGGIKNMDALPTA
                     VFLIDVGHEEIAVREARKLAIPVVAVVDTNCSPDGIDYPIPGNDDAMRAIALYAEGIA
                     DAVLDGKASIPEVPTGDDEFVELDESGKPKVEARAKKAPPKKRSRVTKVRSKGRPRQT
                     EESSGDSDDEADGE"
     gene            1765..2655
                     /gene="tsf"
                     /locus_tag="VIQ99_04100"
     CDS             1765..2655
                     /gene="tsf"
                     /locus_tag="VIQ99_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEY9182357.1"
                     /translation="MEIKPALVKELRERTGAGMMECKKALVETNGDLDLAAEHLRKAG
                     AAKADKKASRVAAEGRIAIRSDAKSGRHVVLEVNSETDFVAKDDNFRAFVERVADVVL
                     TQRPANVEALLRASVDGRTLEELRLELVTKVGENISVRRFDVVESRGNVGTYVHGTRI
                     GVLVDLEGGDPAFARDIAMQIASLAPRYVTSDDVPKELLDKEREIIQAQTAEETEKKP
                     PEIIAKMVEGKLRKFVDEITLTGQIFVKDEKGKARVRDVLAQHKAKVKGFRRFEVGEG
                     IEKKSTDFRAEVMAQAGQTR"
BASE COUNT          544 a          825 c          892 g          432 t
ORIGIN      
        1 ctcgaccgtg aacgtcatcc cgggcacgag ctcgactccg gtgcccggac ggccgtagtg
       61 caggacctgc ggatcctcgt gaaacacgcg gccgatgccg tggccgcaat actcgcggac
      121 caccgagaag cgctgttcct cgatgaaggt ctggatcgcg tgcccgatgt cgccgagcct
      181 gccgcccggg cgcacggccc ggatgccgcg ccacatgccc tcgaagcacg cccgcgtcaa
      241 gcgttcggcc atgatcgacg gcgggccgac gaagaacatg cggctcgtgt cgccgtgata
      301 gccgtctttg atcaccgtga tgtcgatgtt cacgatatcg ccgttgcgta agatccggtc
      361 gctcgggatg ccgtggcaca cgacgtggtt gatcgacgtg cagatcgatt tcgggaacgg
      421 cgtggtgccg gccgagccgc gatagttcag cggcgccggg atcgatccca gatcattcac
      481 tatatagtcg tgacagaggc ggtcgagctc ttcggtcgcg acgccggcct ggacgtgtgg
      541 tccgatcatg tcgagcacct gcgctgccaa acgcccggcc acgcgcatct tgtcctgctc
      601 ttcaggcgtc ttgatcgtaa tcatcttcga agagctcgtg ctgtggccga cgcggggctt
      661 ccggaggtta tctggcgccg tacgagcggg ttcacgttgt ttgcggccgg tgggctatgg
      721 tataaagcgc gcgcctcgga ggcaaaccac cccctgaggt aatttcacac acgcgccaaa
      781 cactgcgggc ggggtgcctc ggcaacgggg tcgtctgtag aaacgcgtgg aggatcaacc
      841 ccaacaagga gcttcccatg gccgacgtca ccatgcgccg gatgctggaa gcgggtgtgc
      901 acttcgggca ccaaacccgt ttctggaatc ccaagatggc cccgttcatc ttcggcgagc
      961 gcaacaagat ccacatcatc aatctcgaag agacgatgcc gctctacaag gcggccagcg
     1021 agttcgtgcg taagctcgtc gccgacggcg gcacgttgct gttcgtcggc tccaagcgag
     1081 ccgcgcgcga ggcgatcgcg accgaggccg tgcgttgcgg catgccgtac gtcacgcaac
     1141 gctggctcgg cggcatgctc acgaacttca agacgattcg ccaatcgatc aagcgtttga
     1201 agacgctcga ggaaatcacg gagcccggcg cggtcgtgaa tttcacgaag aaagagctgt
     1261 tgaagctggg tcgcgagaag gaaaagctcg agaagacgct cggtggcatc aagaacatgg
     1321 atgcgctgcc gacggcggtg ttcctgatcg acgtcggtca cgaggagatc gccgtgcgcg
     1381 aggctcgtaa gcttgcgatc ccggtcgtgg cggtcgtcga cactaattgc tcgcccgacg
     1441 gcatcgacta tccaatcccc ggcaacgacg acgcgatgcg cgcgattgcg ctctatgccg
     1501 aaggcatcgc cgacgccgtg ctcgacggca aggcctcgat tcccgaagtc ccgaccggcg
     1561 acgacgagtt cgtggagctc gacgagagcg gcaagccgaa ggtcgaagct agggccaaga
     1621 aggcgccacc caagaagcgg tcacgcgtca cgaaggtgcg ctcgaaaggc cggcctcggc
     1681 agaccgagga gtcgtccggc gacagcgacg acgaagcgga cggcgagtag gtcgtttcaa
     1741 gaaccgaacg agaggactcc ggccatggaa atcaaaccgg ccttggtcaa ggaactgcgc
     1801 gagcgcaccg gcgccggcat gatggaatgc aagaaagcct tggtcgagac caacggcgat
     1861 ctcgacctcg ccgccgagca cctgcgcaag gccggcgccg cgaaggccga taagaaagcc
     1921 tcgcgcgtgg cggccgaggg ccgcatcgcg atccgcagcg acgcgaagag tggtcgccac
     1981 gtcgtgctcg aggtcaactc cgagaccgac ttcgttgcga aggacgacaa cttccgcgcg
     2041 ttcgtcgagc gcgtcgctga tgtcgtcctc acgcagcgcc cggccaacgt cgaggcgttg
     2101 ctgcgcgcgt ccgtcgacgg ccggaccctc gaggagctgc gtctggagct cgtgacgaag
     2161 gtcggcgaga acatctccgt gcgtcgcttc gatgtggtcg aaagccgtgg gaacgtcgga
     2221 acgtatgtgc acggcacgcg tatcggcgtg ctcgtcgatc tcgagggcgg cgatccagcg
     2281 ttcgcgcggg acatcgcgat gcagatcgca tcgctggcgc cgcgctacgt aaccagcgac
     2341 gacgtgccga aggagctcct cgacaaagag cgcgagatca ttcaggcgca gaccgccgag
     2401 gaaaccgaga agaagccgcc ggagatcatc gccaaaatgg tcgagggtaa gctgcggaag
     2461 ttcgtcgacg agatcacctt gaccggacag attttcgtga aagacgagaa gggcaaggcg
     2521 cgggtccgcg acgtgctcgc tcagcacaag gcgaaggtca aagggttccg ccgcttcgaa
     2581 gtcggcgagg gcatcgagaa gaaaagcacg gacttccgcg cggaagtcat ggcgcaagca
     2641 ggccagactc gttaaattac ccgcgtcccg gcggcacccc tcagagggtg tct
//
LOCUS       DATCUD010000281         3648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73909, whole genome shotgun sequence.
ACCESSION   DATCUD010000281 DATCUD010000000
VERSION     DATCUD010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3648
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73909"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1289)
                     /locus_tag="VIQ99_04105"
     CDS             complement(<1..1289)
                     /locus_tag="VIQ99_04105"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182358.1"
                     /translation="MSRAREKATLAVLFVGVLIAALDIAIVGPALPAIRGTFEVGQRW
                     LPTVFSVYVLFYLIGTPLLAKRSDRRGRRRVFLESLAVFGVGSLLAATAWSFPALLLG
                     RAIQAFGAGGLLPVAAAVIAETVPLERRGRTLGLIGAVFGVAFLLGPLLGGLLLKWSW
                     RWLFVTGIPIALLLMAVGSRVLPRAVRIEPTRFDASGAALLAVLLTAGVVGIAQVDTQ
                     AFVASLTSPRVWPCFALIALGIPLLWSVEKRAADPVLPPSLFRLPQIRIVGVIALAVG
                     GVEAGMVFLPDIVVWNFGVDAATASLTMLPLVLTLAAGAPLAGWLLDHVGARVIVQLG
                     LALTIGGLASLALLPLDWRTFYAAGVMVGFGMASLLGAPLRYIVLQESGEGRRGAGQG
                     LLTLCVSIGQLVGSAVIGGVVGSATDVLPGYRQALLAV"
     gene            complement(1290..1841)
                     /locus_tag="VIQ99_04110"
     CDS             complement(1290..1841)
                     /locus_tag="VIQ99_04110"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY9182359.1"
                     /translation="MQRRRERTRASLLAIGARQFAARGIGPVSVEELIAEADVSRATF
                     YGFFSSKYSLLEGILNPIFDVATEAIRALAARPPAEAVDGLVDVYWSLWTTHREALLL
                     IPLVDQETFEHFEARHRALQDALLDLLLAVERADLLRNGSAQYSLKVIARTAVQLLRV
                     YDGHPAAAALFRDALRGLLLRAH"
     gene            complement(1930..2922)
                     /gene="dmeF"
                     /locus_tag="VIQ99_04115"
     CDS             complement(1930..2922)
                     /gene="dmeF"
                     /locus_tag="VIQ99_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008098907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HEY9182360.1"
                     /translation="MQQNPLARWQHDHSFGQDQRRAGERKTQLVIVITATMMVIEIAA
                     GIVFGSMALLADGLHMASHAVALGINAYAYVYARRHARDASFSFGTGKVNTLGGFTGA
                     VLLAGFALLMASESIQRLVVPVAIAFDQAIWVAVAGLVVNGVSMLILGTGHGHTHDHH
                     DHHADHHPDQDLDHDHDHDHDDRQGGEHDHNLMSAYLHVLADALTSLLAIGALLAAKY
                     FGLTWMDPLMGLVGAVLVARWSFGLLRVTSAVLLDKSAAPEVCAAVRERIESVDGNRV
                     ADLHLWCIGLNLYSLVLTVITPTPRPPGHYKALLPPDLGIVHTTVEVHASAEPE"
     gene            complement(2962..>3648)
                     /locus_tag="VIQ99_04120"
     CDS             complement(2962..>3648)
                     /locus_tag="VIQ99_04120"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF022137.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9182361.1"
                     /translation="PSRRGVLAGAEPPRELEVVVSGLKVVVDIANGQKTGAYLDQQRN
                     RKRVAAHARGTDVLDAFAYTGGFSIACLRGGATGALLVDSSAEAATLAERDAARNGVA
                     ERCSFVVANVFDELRALREAGRQFGLVVLDPPKFVHSAEQLASGSRGYKDINLLGLEL
                     VRSGGVLATFSCSGHVDSALFQKIVAGAAVDSGRTAQILERLSQPGDHPVATEFPESE
                     YLKGLILRVH"
BASE COUNT          731 a         1270 c         1145 g          502 t
ORIGIN      
        1 accgcgagca gcgcctgacg atagccgggc aacacgtccg tcgccgagcc gacgaccccg
       61 ccgatcacgg ccgagccgac gagctgaccg atgctcacgc acaacgtcag caacccctgt
      121 cccgcacctc ggcgcccttc accggattcc tgcagcacga tgtatcgcag cggcgcgccg
      181 agcagcgacg ccatgccgaa gccaaccatg acacccgcgg cgtagaacgt gcgccagtcg
      241 agcggtagca gcgccagcga cgcaagcccg ccgatcgtca acgccaggcc gagctggacg
      301 atcacacgcg caccgacgtg atcgagcagc cagcccgcca gcggcgctcc ggccgcgaga
      361 gtcagcacga gcggcaacat cgtgaggctt gcggtcgctg catcgacgcc gaagttccac
      421 acgacgatgt cgggcaggaa gaccatgccg gcctccacgc cgccgaccgc caacgcgatg
      481 actccgacga tccggatctg cggcagccgg aacagcgagg gaggcaacac gggatccgca
      541 gcccgctttt caaccgacca gagcaggggt atcccgagcg cgatcagcgc aaagcacggc
      601 cacacacgcg gcgacgtgag gctcgcgacg aacgcctgcg tatcgacctg cgcaataccg
      661 acgactccgg ccgtcagcag cacagccagc aacgcagctc cggacgcgtc gaaccgagtg
      721 ggctcgatcc gaactgctcg aggcaacacc cgcgacccga cggccatcag cagcagcgcg
      781 atcggaatgc cggtcacgaa cagccatcgc cagctccact tcagcagcaa tccgccaagc
      841 agcggaccga gcagaaacgc gacgccgaac accgcaccga tcaatccgag cgtccggccg
      901 cggcgctcca gcggcaccgt ttccgcgatc acggccgccg cgacaggcaa tagaccaccc
      961 gcgccgaacg cctgaatagc tcggccgagc aacaacgccg ggaacgacca cgccgtcgcc
     1021 gccagcaatg acccgacgcc gaaaaccgcg aggctctcga ggaagacgcg ccggcgaccc
     1081 cggcggtccg accgcttcgc gagcaaaggt gtgccgatca gatagaacag cacgtaaacg
     1141 ctgaacacgg tcggtaacca ccgctggccg acctcgaacg tgccccgaat cgccggtaac
     1201 gccggcccga cgatcgcgat atcgagagcc gcgatcaaaa cgccgacgaa cagcacggcc
     1261 agcgtggctt tctcgcgggc ccggctcact caatgagccc gcagtaagag accgcgcaac
     1321 gcgtcccgga acagggcggc agcggccgga tggccgtcgt acacgcgtaa gagctgcacg
     1381 gcggtccgcg cgatcacctt cagcgagtac tgcgcgctgc cgttccgaag caggtcggcc
     1441 cgctcgaccg cgagcaacag gtccagtaag gcgtcctgca acgctcgatg ccgcgcctcg
     1501 aagtgctcga acgtctcctg atccacgagc ggtatcagca gcagagcttc acggtgcgtc
     1561 gtccacagcg accaatagac gtccaccaga ccgtcgacgg cttcggccgg cggacgagcg
     1621 gccaatgcac gtatcgcctc ggtcgctaca tcgaatatgg gattaagtat gccctctaat
     1681 agactgtatt tgctcgagaa gaatccatag aaagtcgcgc gcgagacgtc ggcttcggcg
     1741 atcagctcct cgacgctgac gggaccgatt ccgcgggccg cgaattgccg cgcgccgatc
     1801 gcgagcagag acgcgcgggt ccgttcgcgc cgtcgctgca ccctttcgct ggcacgagcg
     1861 cggctcgcgc gcgttgtcgt cggggacctc accaataaat catacaccac tatctgtttt
     1921 tgaacactgc tattcaggtt cggcgctggc gtgaacctcg accgtcgtgt gcacgatccc
     1981 gagatcgggc ggcagcaagg ccttgtagtg ccccggcggg cgcggcgtcg gcgttatcac
     2041 ggtcaacacc aatgaatata ggttcaggcc gatgcaccag agatgcaggt cggccacccg
     2101 gttgccgtcg acggattcga tccgctcgcg aacggcggca caaacctcgg gagccgcgct
     2161 cttatccagc aacaccgcgc tcgtgacccg gagcagcccg aacgaccagc gcgccaccaa
     2221 cacggccccc acgaggccca tcagcgggtc catccaggtc aagccaaaat acttcgcggc
     2281 caacaaggcc ccgatcgcga gcagggaggt cagcgcgtcg gccagcacgt gcagatacgc
     2341 ggacatcagg ttgtggtcat gttccccacc ctgccggtcg tcgtggtcgt ggtcgtggtc
     2401 gtggtcaagg tcctggtcgg ggtggtgatc ggcgtggtgg tcatgatggt cgtgggtgtg
     2461 gccgtgaccg gtacccaaaa tcagcatcga cacaccgttc acgaccaggc ccgccacggc
     2521 gacccagatg gcttggtcga acgcgatcgc gaccggcacg acgagccgct ggatgctttc
     2581 ggacgccatc agcaacgcga agcccgcgag cagcacggcg ccggtgaagc caccgagcgt
     2641 attgacctta cccgtgccga aactgaacga ggcatcgcgc gcatggcgac gcgcatacac
     2701 gtaagcatac gcgttgatgc cgagcgcaac ggcgtgcgag gccatgtgca acccgtcggc
     2761 caacagcgcc atggagccga acacgatgcc ggccgcgatc tcgatgacca tcatcgtcgc
     2821 cgtgatcacg atcacgagct gggtcttgcg ttcgccggct cggcgctggt cttggccgaa
     2881 ggaatgatcg tgctgccagc gagccagggg gttctgttgc atgcgttctc ttgaatggtg
     2941 gccgtcgtgg cacgctcagg gtcagtgaac gcgcaggatc aagcccttca ggtactcgga
     3001 ctccggaaac tccgttgcaa ccggatggtc gccgggctgg gaaaggcgct cgaggatctg
     3061 cgccgtgcgg cccgagtcga cagccgcgcc ggccacgatc ttttggaaca acgcgctatc
     3121 gacgtggccc gagcacgaga acgtcgcgag cacgccgcca gagcgcacga gctcgaggcc
     3181 gagcaagttg atgtccttgt aacctcgact gccggatgcc aactgctcgg ccgagtgcac
     3241 gaacttcggc ggatcgagca cgacgagccc gaactggcgc ccggcctcgc gcaacgctcg
     3301 gagctcatcg aacacgttcg cgacgacgaa gctgcagcgt tccgcgactc cgttgcgagc
     3361 tgcgtcacgc tccgcgagcg tggcggcctc ggccgaggag tcgaccagca acgcgccggt
     3421 cgcgccgccg cgcaagcagg cgatcgagaa accgccggtg taggcgaacg cgtcgagcac
     3481 gtctgtaccg cgcgcatgcg ccgcaacgcg cttgcgattg cgctgctggt cgaggtaagc
     3541 gcccgtcttt tgaccgttcg cgatgtcgac cacgaccttc aacccgctga ccacgacctc
     3601 gagctcgcgc ggcggctctg cgccggccaa gaccccgcgc cgcgacgg
//
LOCUS       DATCUD010000282         1691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_95228, whole genome shotgun sequence.
ACCESSION   DATCUD010000282 DATCUD010000000
VERSION     DATCUD010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95228"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1060)
                     /locus_tag="VIQ99_04125"
     CDS             complement(<1..1060)
                     /locus_tag="VIQ99_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008943383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY9182362.1"
                     /translation="MNYASGRHFLQIPGPTNVPDRVLRAMAAPTIDHRGPEFGVLGRE
                     VLAELKPIFKTRNPVIIYPASGTGAWEAALVNTLSPGDQVLMSETGWFASLWREMALK
                     LGLRPEILPTDWRHGTDPAAIEARLEQDRAHGIKAVCVVHNETSTGVVSRIGEVRKAI
                     DRARHPALLLVDTISSLASVDFRMDEWGVDVTVAGSQKGLMLPPGLSFNAISTRALAV
                     AKSAKLPKAFWGWDEMLANNKNGYFPYTPVTNLLYGLREALKMLNEEGLENVFARHTR
                     HGEATRRAVTAWGLEVLCANPAEYSGSLTAVLMPEGQSADRLRKTILEAFDMSLGTGL
                     GRLADKVFRIGHLGHFNDL"
     gene            1159..1308
                     /locus_tag="VIQ99_04130"
     CDS             1159..1308
                     /locus_tag="VIQ99_04130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182363.1"
                     /translation="MGGATVGAATKPLTFVVLVEKVGEGPARFDDGAEGRRVTTHWRD
                     ESAAL"
     gene            1361..>1691
                     /locus_tag="VIQ99_04135"
     CDS             1361..>1691
                     /locus_tag="VIQ99_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HEY9182364.1"
                     /translation="MDVWLMWLDAIRGVITTLSSDAGLSFGLAIVVVTIVLRALLLPL
                     AWPIAYRACIRQKKMLKLQPELKALRERFGDKPDVYLQKMTELYANHGLELVDFKGLL
                     GGFAQLPV"
BASE COUNT          302 a          562 c          529 g          298 t
ORIGIN      
        1 tgaggtcgtt gaagtgcccc aagtggccga tccgaaacac cttgtccgcg aggcggccga
       61 gcccggtgcc cagcgacatg tcgaacgcct cgaggatcgt cttgcgcaga cgatcggcac
      121 tctgcccttc cggcatcagg acggccgtca acgaaccgct gtactcggcc ggatttgcgc
      181 atagcacctc gagaccccac gccgtcacgg cgcgccgcgt cgcctcgccg tgccgcgtat
      241 ggcgcgcgaa cacgttctcg agcccctcct cgttcaacat cttcagcgct tcacgcaggc
      301 cgtacagcaa attcgttacc ggcgtgtagg ggaaataacc gttcttgttg ttcgcgagca
      361 tctcgtccca gccccagaac gccttcggca gcttcgcgga cttcgccacc gcgagcgcgc
      421 gcgtcgagat cgcgttgaac gacagcccag gcggcaacat cagacctttc tgcgagccgg
      481 ccacggtcac gtcgacgccc cactcgtcca tgcgaaagtc gacggaggcc agcgacgaga
      541 tcgtgtcgac gagcaacagc gccggatgac gcgcgcggtc gatcgccttg cgcacctcgc
      601 caatccggct cactacgccg gtcgacgttt cgttgtgcac gacgcacacg gccttgatcc
      661 cgtgcgcgcg atcctgctcg aggcgcgcct cgatcgcggc ggggtccgtg ccgtggcgcc
      721 aatccgtcgg caagatctcg ggtctaagcc ccagcttcag cgccatctct cgccacagcg
      781 acgcgaacca gcccgtctcg ctcatcagca cttggtcgcc cggcgacaac gtgttcacga
      841 gcgcggcttc ccaagcgccc gtgccggacg ccggataaat gatcacggga ttgcgggtct
      901 tgaagatcgg cttcagctcc gcgagcacct cgcggccgag cacgccgaac tcgggaccgc
      961 ggtgatcgat cgtcggcgcg gccatcgcac gcagcacgcg gtcgggcacg ttggtgggac
     1021 cgggaatctg gaggaagtgg cggccgctcg cgtagttcat caaaggaacc cgggttaggt
     1081 aaattgttcg taaattctgc gagcagcgag tttacctggc gcgcgccgcg cgcgcagacc
     1141 cttctatacg caagtgccgt gggaggcgcc actgtcggcg cagcaaccaa gccgttgacg
     1201 ttcgtcgtgc tcgtcgagaa ggtcggagag ggaccggcgc ggtttgacga cggggccgag
     1261 gggcgtcgag tcaccacgca ttggcgcgac gagtcggcag cgctctaacg tgtctttggc
     1321 tgtatcctat cggccgtaac acccccggag gagacacgcg gtggacgtct ggctgatgtg
     1381 gctcgatgca attcgcggcg tcatcacaac gctctcgtcc gatgcgggac tcagcttcgg
     1441 tctcgcgatc gtcgtcgtga ccatcgtgct gcgagcgttg ttgctgccgc tcgcatggcc
     1501 gatcgcgtat cgcgcgtgta tccggcagaa gaagatgctg aagctgcagc ccgagctcaa
     1561 agcactgcgc gagcgcttcg gggacaaacc cgacgtctac ctacagaaaa tgacggagct
     1621 ctacgccaat cacggcctag agctcgtcga cttcaaagga cttctcggcg ggttcgcaca
     1681 gctaccagtg t
//
LOCUS       DATCUD010000283         1641 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45368, whole genome shotgun sequence.
ACCESSION   DATCUD010000283 DATCUD010000000
VERSION     DATCUD010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45368"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..359)
                     /locus_tag="VIQ99_04140"
     CDS             complement(<1..359)
                     /locus_tag="VIQ99_04140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182365.1"
                     /translation="MTALRSLLIAAMGFMAVTVPARAQDEINDALFTEMTALVIAHDL
                     AIIVGLSPTPLIQLGGETVEFSSNLALKFVPPWIEAPPNLSVDPMAPPSDASYTVPAG
                     GCGIEFRLLSAQGDYEN"
     gene            578..1588
                     /locus_tag="VIQ99_04145"
     CDS             578..1588
                     /locus_tag="VIQ99_04145"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182366.1"
                     /translation="MRCVPTALYAFAAITPFAAPAFAHHSQAMFDQSQEILVEGTVAR
                     FDWVNPHMYLVVETKGPDGQPALVEGEGLGITQALVDGLDRDALKPGTRVVMRANPNR
                     GGWGKQVRILDVTTEDGEIHPFYTANTRTRTLTPAESLEGHWAPSRAALGAGFGAMAR
                     WPVTPEGRAAQAQLVADGLCYVEPIPFLAVLDELRTIDIGDDEVVMQFDNTGDHVTRR
                     IPMQAEHPADVQPSLHGHSIGRWDGDTLVIDTIGYEPNPSGNGANVPSSARKHTVERL
                     TLTADRTRLRYEVTVEDPTYLTGPGTLTQQWDHRPDLEFSQNTGACDPEVARRYKDHV
                     PQ"
BASE COUNT          284 a          562 c          529 g          266 t
ORIGIN      
        1 atgttctcgt agtcgccctg cgcgctgagc aggcggaact cgatgccgca gccgcccgcc
       61 ggcacggtat acgaggcgtc gctcggcggc gccatcgggt cgacggatag gttcggtggc
      121 gcctcgatcc aaggcggcac gaatttcaac gcgaggttcg aactgaactc gacggtttcg
      181 cccccgagct ggatcagcgg cgtcggggag agaccgacga tgatcgccag gtcgtgcgcg
      241 atgacgagcg ccgtcatctc cgtgaacaag gcgtcattga tttcgtcctg cgcacgagca
      301 gggacggtga cagccatgaa gcccatggcc gcgatgagca gcgagcgaag cgctgtcaac
      361 cccactccag tatcggagcc cgacgccggc gccgggcctg gattcttgtt gttctcgacc
      421 tcagtctgcc tgaactcttc tcaagacggc aatgagcttg agcttactaa tggcgaagcc
      481 gcagacgaaa taacgctcgc gctcgtgccg ggctcgagtg gttcgctgtc tctgttctca
      541 ttatcatccc cgtatgttgt cgatccgagg ttccgtcatg cgctgcgtgc ccaccgccct
      601 ctacgcgttc gcggcgatca cgccgttcgc cgcgcccgct ttcgcccacc atagccaggc
      661 catgttcgac cagtcccagg agatcctggt cgaggggacg gtggcgcgat tcgactgggt
      721 gaatcctcat atgtacctgg tcgtcgagac caaaggcccc gacggtcagc cggcgctggt
      781 cgaaggcgaa ggcctcggga tcacgcaggc actcgtcgac ggcctcgatc gcgacgcact
      841 caagcccggc acgcgcgtcg tcatgcgcgc gaatccgaat cgcggcggct ggggcaagca
      901 ggtccgaatc ctcgacgtca cgaccgagga cggcgagatt cacccgttct atacggccaa
      961 cacccggacg cgcacgctga cgccggccga gagtctcgag ggtcactggg cgccctcccg
     1021 ggcagcgctc ggcgcgggct tcggagccat ggcgcgctgg ccggtcacgc cggaaggccg
     1081 cgccgctcag gcgcagctgg tcgccgatgg gctctgctat gtcgagccca taccgttcct
     1141 cgccgtgctc gacgagctgc gcacgatcga catcggcgat gacgaagtcg tgatgcagtt
     1201 cgataacaca ggcgaccatg tcacgcgtag gatccccatg caggccgagc atccggccga
     1261 cgttcaaccc tccctccacg ggcactccat cggccggtgg gacggcgaca cgctcgtgat
     1321 cgatacgatc gggtacgagc ccaatccgtc cggcaacggc gcgaacgtgc cgtcgagcgc
     1381 gcgcaagcat acggtcgaac ggctcacgct cacggcggat cgcacgcgcc tgcgctacga
     1441 ggtgactgtc gaagacccga cgtatctgac cgggccgggc acattgacgc agcagtggga
     1501 ccaccgtccc gacctcgagt tctcgcagaa cacgggggcc tgcgacccgg aggtggcccg
     1561 caggtataag gaccacgtgc cccagtaggc cgtcggttcg gccgcggcgt tcagcgcccg
     1621 ccgccgcccc cgccgccgcc c
//
LOCUS       DATCUD010000284         2401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31280, whole genome shotgun sequence.
ACCESSION   DATCUD010000284 DATCUD010000000
VERSION     DATCUD010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31280"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1114)
                     /gene="mnmG"
                     /locus_tag="VIQ99_04150"
     CDS             complement(<1..1114)
                     /gene="mnmG"
                     /locus_tag="VIQ99_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017641472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEY9182367.1"
                     /translation="MDFPTRYGCIVVGGGHAGTEAALAAARMGVRTLLLTQNLETLGQ
                     MSCNPAIGGIGKGHLTKEIDALGGAMARAIDRAGIHFRILNASKGPAVRATRAQADRT
                     LYKRAIREILDAEPNLTLLQQNADGLLLDGTRVRGIVTQTGIKIQAETVVLTVGTFLD
                     GKIHVGQVNYSGGRAGDPASIGLARGLRELGLAVGRLKTGTPPRIDGRTIDYTNLAEQ
                     PGDAPTPVFSFLGRRAEHPRQVSCHITHTTERTHEIIRKGLDRSPLFTGAIEGVGPRY
                     CPSIEDKVVRFADRTRHQIFIEPEGLNTFEIYPNGISTSLPFDVQLDLVHSIPGFENA
                     HVTRPGYAIEYDFFDPRDLKFSLETKAIEGLFFAGQI"
     gene            1228..>2401
                     /locus_tag="VIQ99_04155"
     CDS             1228..>2401
                     /locus_tag="VIQ99_04155"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9182368.1"
                     /translation="MRAVLGVLCAGGGVLLAPHTAAAQADPLTQDRCRLALDPLPAAY
                     ARCGTLDVPLDPTSPDGPTVGVFVARIAALGAEPRLDPLLLIAGGPGGSTVDMYLQER
                     GAFEQVRRERDLILVDQRGTGRSSAGFECTVRDDLSLDTAGLEELTGVVDECLAVLEH
                     DPRFYTTSIAVQDLERVRAALGLEQWNVYGVSYGTRVAQHYLRRYPERVRSVILDGVV
                     PPGLVLGPDVAREAQRALEQIFARCAAEAQCGARFANLPSTFAELLARLDDAAAADPS
                     ARPPLSAMELRVLVRFMSYNVATVSLLPVLIAEAHAGNYAPLVGQARTLLRDLPEALS
                     FPMSNSVTCTEDARFFDDEAGDNLGGTYLGTAIVEGLSVICSRWPVGVMDEDFKMPV"
BASE COUNT          356 a          806 c          825 g          414 t
ORIGIN      
        1 tgatctggcc cgcaaaaaac agcccttcga tggccttggt ctcgagcgag aacttgagat
       61 cccgcgggtc gaagaagtca tactcgatcg catagccggg acgagtcacg tgcgcgttct
      121 cgaaacccgg gatcgaatgc acgaggtcga gctgcacgtc gaacggcagc gaggtcgaga
      181 taccgttcgg atagatctcg aacgtgttca ggccttcggg ctcgatgaag atttgatgcc
      241 gagtccggtc cgcgaaccgc acgaccttgt cctcgatcga cgggcagtag cgtgggccga
      301 cgccttcgat cgcgcccgtg aacagcggcg accgatcgag gcctttcctg atgatctcgt
      361 gcgtgcgctc ggtcgtgtgg gtgatgtggc agctgacctg acgcgggtgc tcggcccgcc
      421 gtcccaagaa cgagaacacc ggcgtcgggg cgtcgccggg ctgctcggcc agattcgtgt
      481 agtcgatcgt gcggccgtcg atccgcggcg gcgtgccggt cttgagccga ccgaccgcga
      541 ggccgagctc ccgaagaccg cgcgcgaggc cgatcgacgc cggatcgcct gcgcggccgc
      601 ccgaataatt gacctgaccc acgtggatct tgccgtccag gaacgtgccg accgtgagca
      661 cgacggtttc ggcttggatc ttgattccgg tctgcgtgac gatgccgcgc acgcgcgtgc
      721 cgtcgagcaa gagcccgtcg gcgttctgct gcagcagtgt caggttcggc tcggcatcga
      781 ggatctcgcg gatcgcgcgc ttgtacagcg tgcggtccgc ttgtgcgcgc gtcgcgcgca
      841 ccgcgggtcc cttgctagcg ttcaagatcc ggaaatgaat accggcgcgg tcgatcgcgc
      901 gcgccatcgc gccgccgagc gcgtcgatct ccttcgtgag gtgccccttg ccgatgccac
      961 cgatcgcggg gttgcagctc atctgcccca gcgtttccag gttctgcgtc aacagcagcg
     1021 tgcggacgcc catccgggcc gccgcgagtg cggcctcggt gccggcgtgg ccgccgccga
     1081 cgacgatgca gccgtaacga gtggggaaat ccatgctcac ggtgcgattc tagggggagc
     1141 ccacctaagc tgaccacaag gttttccaca gatttcatgc tggccgggct tggggcattt
     1201 cggcgaagat ctgccgcgat gcgaacgatg cgcgccgtcc tcggggtgtt gtgcgcgggc
     1261 ggcggcgtgc tgctcgcgcc tcacacggct gcggcccagg cggacccgct gacccaggat
     1321 cgctgccgcc tcgcgctcga ccctcttccc gccgcgtatg cgcgctgcgg gacgctcgac
     1381 gtgccgctcg accccacgag cccggacggc ccgacggtcg gcgtgttcgt cgccaggatc
     1441 gcggcgctcg gcgccgagcc gcgcctagac ccgctgctgc tgattgcagg cggacccgga
     1501 ggcagcacgg tcgacatgta ccttcaggag cgcggggctt tcgagcaggt gcgccgcgag
     1561 cgcgatctga tcctcgtcga ccagcgcggc accggtcgct ccagcgccgg tttcgaatgc
     1621 accgtccgcg acgatttgtc gctcgacacg gccggcctcg aggagctcac tggcgtcgtc
     1681 gacgagtgcc tcgcggtgct cgagcacgac ccgcgcttct acacgacctc gatcgcggtc
     1741 caagatctcg agcgcgtgcg cgctgcgctc gggctcgagc agtggaacgt ctacggcgtg
     1801 tcgtacggca cgcgagtcgc acagcattat ttgcggcgct accccgagcg cgtgcgctcg
     1861 gtgatcctcg acggcgtcgt gccgccgggc ctcgtgctcg ggcccgacgt cgcgcgcgag
     1921 gcgcagcgcg cgctcgagca gatcttcgcg cgctgcgcgg ccgaggcaca gtgcggcgcg
     1981 cggttcgcga acctgccgag cacgttcgcg gagctattgg cacggctcga cgacgccgca
     2041 gccgcggatc cctcggcgcg cccaccgctc tccgcgatgg agcttcgcgt gctggtccgc
     2101 ttcatgagct acaacgtggc cacggtctcg ttgctgcctg tgctgatcgc ggaggctcac
     2161 gccggcaact acgcgccgct cgtgggtcag gcgcgcacgc tgctgcgcga tctgccggaa
     2221 gcgttgagct ttccgatgag caactccgtc acgtgcacgg aagacgcgcg gttcttcgac
     2281 gacgaagccg gcgacaacct gggcggaacg tatctaggca ccgcgatagt cgaaggcttg
     2341 agcgtgatct gcagccgctg gcccgtcggt gtgatggacg aggacttcaa gatgccggtc
     2401 g
//
LOCUS       DATCUD010000285         2621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_80992, whole genome shotgun sequence.
ACCESSION   DATCUD010000285 DATCUD010000000
VERSION     DATCUD010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2621
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_80992"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..712)
                     /gene="kdsA"
                     /locus_tag="VIQ99_04160"
     CDS             complement(<1..712)
                     /gene="kdsA"
                     /locus_tag="VIQ99_04160"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015448017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY9182369.1"
                     /translation="MRLAGFEVGAEKPLFLIAGPCVIESEALVMSTAERLKDITTKLE
                     MSFVFKASFDKANRSSLRSFRGLGLERGLRVLERVRRELGLPVLTDVHEDSPLDEVAA
                     VVDVLQTPALLCRQTDFIVAVASQGKPVNLKKGQFLAPWEMRNVVDKARSTGNDALLV
                     CERGVSFGYNNLVVDMRSLAILRDTRCPVVFDATHAVQLPGERGSASGGEREHVPVLA
                     RAAVAAGVAGVFIETHPDP"
     gene            complement(709..2361)
                     /locus_tag="VIQ99_04165"
     CDS             complement(709..2361)
                     /locus_tag="VIQ99_04165"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY9182370.1"
                     /translation="MTRFIFITGGVVSSLGKGITSACLGAILEARGLKVRLMKLDPYI
                     NVDPGTMSPFQHGEVYVTDDGTETDLDLGHYERFVHTRTNRMSNFTTGKIYSNVIAKE
                     RRGEYLGATVQVIPHITDEIKRNVLAGAGDAEVCMVEIGGTVGDIESLPFLEAIRQMG
                     VELGRDRALYIHLTLVPFMAASAEIKTKPTQHSVKELRSIGIQPDVLVCRSEHPLPRE
                     QRAKIALFTNVEERAVISAVDVDDIYKIPMLLAEQGLDSYVVDKLKLDARPADLSEWQ
                     AVVHAKAHPEAEVTIAMVGKYVDLRDSYMSLTEALRHAGIRTRTRVNILYMESEDLQT
                     EGTSRLNDVDAILVPGGFGERGIEGKIAAVRFAREKKVPYLGICLGLQVAVIEYARNV
                     VGLAGAHSTELNPQTPHPVIALITEWQDRDGTLQERSAASDLGGTMRLGAQTCLVKDG
                     TLAKTIYGADEVSERHRHRYEFNNRYLDQLTKAGLGFSGFSRDGLVELIELPLAVHPW
                     FFATQFHPEFTSNPRDGHPLFTSFITAARSCQGLKLPRVASA"
BASE COUNT          458 a          868 c          850 g          445 t
ORIGIN      
        1 cggggtcggg atgcgtctct atgaacacac ccgcgacgcc ggccgcgact gccgcgcgcg
       61 cgagcaccgg cacgtgctcg cgctcgccgc ccgatgccga accgcgctcg ccgggcagct
      121 gcaccgcatg cgtcgcatcg aacacgactg ggcagcgcgt gtccctcaaa atcgcgagcg
      181 agcgcatgtc gacgaccaaa ttgttgtagc cgaacgagac gccacgctcg cacacgagca
      241 acgcgtcgtt gccggtcgag cgcgccttgt cgacgacgtt ccgcatctcc cacggagcga
      301 ggaactggcc cttcttcagg ttcacgggct tgccctggct cgcgaccgcg acgatgaaat
      361 ccgtttgccg gcacaacaat gccggtgtct gcagcacgtc gacgaccgcg gcgacctcgt
      421 cgagcggcga gtcctcgtga acgtcggtca gcacgggaag gccgagctcg cgccgcacgc
      481 gctcgagcac gcgcagaccg cgttcgagtc ccaagccgcg aaagctgcgg agcgagctgc
      541 gattcgcctt gtcgaacgac gctttgaaca cgaacgacat ttcgagcttc gtcgtgatgt
      601 ctttcaggcg ctcggccgtc gacatcacga gcgcttcgct ctcgatcaca cagggaccgg
      661 cgatcaggaa cagtggtttc tctgcgccga cctcgaaccc ggccagcctc atgcgctcgc
      721 gactcgcggc aacttgaggc cctggcagga acgcgccgcc gtgatgaagc tcgtgaacag
      781 cggatggccg tcgcgcggat tcgacgtgaa ctcggggtgg aactgagtcg caaagaacca
      841 cggatgcacc gcgagcggca gctcgatcag ctcgaccaag ccatcgcgcg agaatcccga
      901 gaacccgagc ccggccttcg tcagttgatc gagatagcgg ttgttgaact cgtagcggtg
      961 ccggtgccgc tcggacacct cgtcggcccc gtagatcgtc tttgcgagcg tgccgtcctt
     1021 gacgaggcac gtctgcgcgc cgagccgcat cgtgccgccc aggtccgagg cggcgctgcg
     1081 ctcctggagc gtgccgtcgc ggtcttgcca ctccgtgatc aacgcgatca cggggtgcgg
     1141 cgtctgcggg ttcagctccg tcgagtgggc gcccgcaagc cccacgacgt tgcgcgcgta
     1201 ctcgatgacc gcgacctgca gcccgagaca gatgccgaga tacggcacct tcttctcacg
     1261 cgcgaagcgg acggccgcga tcttgccctc gatgccgcgc tcgccgaagc cgccggggac
     1321 gaggatggca tcgacgtcgt tcaggcgcga cgtgccttcg gtctggaggt cctcggattc
     1381 catgtagagg atgttcacgc gcgtacgcgt gcggattccg gcgtgacgca aggcttccgt
     1441 cagcgacatg taggaatcgc gcagatcgac gtacttgccg accatcgcga tcgtgacctc
     1501 ggcctccggg tgcgctttcg cgtggacgac ggcctgccac tccgacaggt ccgccggccg
     1561 cgcgtcgagc ttcagcttgt cgacgacgta gctgtctaat ccctgctccg cgagcagcat
     1621 cggaatcttg tagatgtcgt cgacgtcgac ggccgagatg accgcgcgct cctcgacgtt
     1681 cgtgaacagc gcgatcttcg cgcgctgctc gcgcggcaac gggtgctcgg agcggcagac
     1741 gagaacgtcg ggctgaatgc cgatcgaacg cagctccttg accgagtgct gcgtgggctt
     1801 ggtcttgatc tcggccgacg ccgccatgaa cggcacgagc gtcaagtgaa tatagagggc
     1861 ccggtcgcgc ccgagctcga cgcccatctg gcggatcgcc tcgaggaacg gcagcgactc
     1921 gatgtcgccg accgtgccgc cgatctcgac catgcagacc tcggcgtcgc cggcgcccgc
     1981 gagcacgttg cgcttgatct cgtccgtgat gtgcgggatg acctggaccg tagcgccgag
     2041 atactcgccg cggcgctcct tcgcgatcac attagagtag atcttgccgg tcgtgaaatt
     2101 gctcatgcga ttcgtgcgcg tatgcacgaa ccgctcgtag tggccgaggt cgagatccgt
     2161 ctccgtgccg tcgtccgtga cgtagacctc gccgtgctga aacgggctca tcgtgccggg
     2221 atcgacattg atgtacggat ccagcttcat gaggcgaacc ttgaggccgc gggcctcgag
     2281 aatcgcgccc aggcaggccg aggtaatgcc tttgccgagc gaggaaacga ccccgccggt
     2341 gatgaagatg aatcgtgtca tgtcaaaacc gggagggccg gacgccgctt ccgttgggaa
     2401 gccttcgtcc gaccatcgaa gtagtgtgtt aggtacatcg agacgggaga gcaaagtacc
     2461 aaacttgcct ctgggtcacc agccctaagt cgacgccggc gcgagcacgg gcgccgcggg
     2521 cgtccactcg atacgccaac gcggctcggc gtcgtgcgcc tctgcggcgg ccgtcgtcca
     2581 gagatcaccg accgcgacga gctcatcgcc gcgataaaag a
//
LOCUS       DATCUD010000286         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9815, whole genome shotgun sequence.
ACCESSION   DATCUD010000286 DATCUD010000000
VERSION     DATCUD010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9815"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VIQ99_04170"
     CDS             <1..475
                     /locus_tag="VIQ99_04170"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9182371.1"
                     /translation="RLQDETEYRWKGRVDFLDNAVDRNSGTIRLRAVIANPDGFISPG
                     MFGQLRLYATSPFEAMLVPDQAIVTDQTRQIVYVVDAEGVVGQRVVEPGRLIEGLRVI
                     RAGLTPHDRVVVSGVQRARPGRKVAATESSLTAFPTGVSRGEDSRLSLPDAGGSR"
     gene            485..>1504
                     /locus_tag="VIQ99_04175"
     CDS             485..>1504
                     /locus_tag="VIQ99_04175"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182372.1"
                     /translation="MRFSHFFIDRPIFAAAVSVVITLIGLIAYLTLPVDQYPAIAPPT
                     VSVNALYPGATAEEIADTVAAPLEQQINGITDMLYMSSSSTGEGRVTITVTFKNGTNI
                     DIAQVDVQNRIQSVLPQLPQEVRDLGITVRKGSTDFLLIVHMFTSDGSVDRKYIANYA
                     SLQVRERLLRTPGVGDVTTNAARDYAMRVWIDPQRAAVRDLTVQEIVAALRNNNLQVA
                     GGAIGAPPFNDNPAAYQLNVRAQGRLDTPEQFAEAIIKRDAEGRVTRIGDVARVELGA
                     QSYAVNAYKSLEPAVSLSVQQAPNTNALETWANIRETMEELKQQFPPGIAYEIIYNPV
                     SFTQAA"
BASE COUNT          265 a          495 c          505 g          239 t
ORIGIN      
        1 ccgcttgcag gacgagaccg agtaccgctg gaaaggccgc gtcgacttcc tcgacaacgc
       61 cgtcgatcgg aactcgggca cgattcgcct gcgcgcggtc atcgcgaacc cggacggatt
      121 catctcgccg ggcatgttcg gtcaactgcg gctgtacgcg acgagcccct tcgaagccat
      181 gctcgtgccg gatcaggcca tcgtcaccga tcagacgcgg cagatcgtct acgtcgtcga
      241 cgcggaaggt gtcgtcgggc agagggttgt cgagccgggg cggctcatcg aagggttgcg
      301 cgtgatacgc gcgggcctga cgccgcacga tcgcgtcgtc gtcagcggcg tgcaacgcgc
      361 gcggcccggc cgcaaggtcg cggcgaccga gagctcgttg accgcgtttc ccaccggcgt
      421 ctcgcgcggc gaggacagcc ggctgtcgct gcccgacgcg ggcggcagcc gctaggcatt
      481 cgtcgtgcgc ttctcgcact tcttcatcga ccggccgatc ttcgcggccg ccgtgtcggt
      541 cgtgatcacg ctgatcggcc tgatcgcgta tctgacgctg ccggtcgatc agtatccggc
      601 gatcgcgccg ccgacggtca gcgtgaacgc gttgtatccg ggcgcgacgg ccgaggagat
      661 cgcggacacg gtcgccgcgc cgctcgagca gcagatcaac ggcatcaccg acatgctcta
      721 catgtcgtcc tcgtcgaccg gcgagggccg cgtgacgatc acggtcacgt tcaagaacgg
      781 cacgaatatc gacatcgcgc aggtcgacgt gcaaaaccgc atccagtcgg tgttgccgca
      841 gctgccgcag gaagtgcgcg acctcggcat cacggttcgc aagggctcga cggacttttt
      901 gctcatcgtg cacatgttca cgtcggacgg cagcgtggac cgcaagtaca tcgcgaacta
      961 tgcgagcctg caggtacgcg agcgactgct gcgcacgccg ggcgtcggcg acgtcaccac
     1021 gaacgctgcc cgcgactacg cgatgcgcgt ttggatcgat ccgcagcgcg ccgccgtgcg
     1081 cgatctcacg gtgcaagaga tcgtcgctgc gctgcggaac aacaatctgc aagtcgcggg
     1141 cggtgcgatc ggcgcgccgc cgtttaacga caatcccgcg gcctatcagc tgaacgtgcg
     1201 cgctcagggt cggctcgaca cgccggagca attcgccgag gcgatcatca agcgcgatgc
     1261 cgagggacgc gtgacgcgga tcggcgacgt cgcgcgcgtg gagctcggcg cgcagagcta
     1321 tgcggtcaac gcgtacaaga gcctcgagcc ggcggtgtcg ctgagcgtgc aacaggcgcc
     1381 gaatacgaac gcgctcgaga cgtgggccaa cattagagag acgatggagg agctgaagca
     1441 gcagttccct cccggaatcg cgtacgagat catctacaac cccgtgtcgt tcacgcaggc
     1501 cgcc
//
LOCUS       DATCUD010000287         1660 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_66881, whole genome shotgun sequence.
ACCESSION   DATCUD010000287 DATCUD010000000
VERSION     DATCUD010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1660)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1660)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1660
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_66881"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VIQ99_04180"
     CDS             <1..257
                     /locus_tag="VIQ99_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182373.1"
                     /translation="SFVLAFAGGVIVLALVESSDTLVRGSRDVVDFIGAPPLAVVPFI
                     ANAADLHARALRRKAVIAGVILWFAVIGFLILRPGANVIA"
     gene            307..1128
                     /locus_tag="VIQ99_04185"
     CDS             307..1128
                     /locus_tag="VIQ99_04185"
                     /EC_number="2.7.10.2"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004713 - protein tyrosine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0004715 - non-membrane spanning protein
                     tyrosine kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CpsD/CapB family tyrosine-protein kinase"
                     /protein_id="HEY9182374.1"
                     /translation="MSAIELGVVTPLPTKEPGHAEELPNLYRREGDQPPDAIETDKLP
                     TVSLNGALLQENRIILDAQESPAGPSYKVLRTRLLQLMRSNHWSTLAVTSTAPGEGKT
                     VTAINLALSFARDVNTTTVLADFDLRKPSVAKYLGILPDHGLTDVLNDTVPLEQAMVS
                     PGLPRLGLLLNSAPTEGSSELLASPGVAKVVRCLRVGPQRIVVFDMPPLLAGDDVLAF
                     APHVDALLVVVAEGVTTRETLSAAKELIKGFNVVGTVLNRSSEGSANHYYAYGYS"
     gene            1125..>1660
                     /locus_tag="VIQ99_04190"
     CDS             1125..>1660
                     /locus_tag="VIQ99_04190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEY9182375.1"
                     /translation="MKEALKNLAMVSVPSLALVLLVLEVVFRTAIPAAARPQAFFDAT
                     TSIWKLDRSVQAEGLATIGKLAQQRARWRINNEGWNSPIDYATEKSRSRVAVIGDSYV
                     EALQVDIERSYPNLLASELGSAWEVYAFGVSGAPLSQYLHMARYVVARFSPDVLVLNL
                     VHNDFTESYADTPEGSGGV"
BASE COUNT          281 a          532 c          547 g          300 t
ORIGIN      
        1 tgtccttcgt gctcgcattc gcgggcggcg tcatcgtcct cgcgctcgtg gagtcgtcgg
       61 atacgctcgt gcgcgggagc cgggacgtcg tggatttcat cggggcgccg ccgttggcgg
      121 tggtaccgtt catagccaac gcggccgatc tccacgcgcg tgcgctgcgc cgcaaggctg
      181 tcatcgcggg cgtgatcctc tggtttgccg tgatcgggtt ccttatccta cggccaggcg
      241 ctaatgtgat cgcctagatc aattgacgaa caacaacacg aaccagtccc aaggaaaggc
      301 aagttcatga gcgcgatcga actgggggtg gtgaccccgc tgccgaccaa ggagccgggg
      361 cacgccgaag aactgcccaa cctctatcgc cgagagggtg accagccgcc ggacgcgatc
      421 gagacggaca agctgcccac ggtgagcttg aacggcgctt tgctccagga gaatcggata
      481 atcctggatg cgcaggaatc ccccgccggc ccgtcctaca aggtcttgcg cacgcggttg
      541 ctccagctga tgcgcagcaa tcactggtcg acgttggcgg tcacgagcac ggctcccggc
      601 gaaggcaaga ccgtgacggc gatcaacctc gcgctgagct tcgcgcgcga cgtcaacacg
      661 acgaccgtgc tggccgactt cgacctgcgc aagccgagcg tcgcgaagta tctcggcatc
      721 ttgccggacc atggtctcac cgacgtgctg aacgacacgg tgccgctcga gcaggccatg
      781 gtgagccccg ggctcccgag gctcgggttg ctgctgaatt cggcgccgac ggagggctcg
      841 tccgagctgc tcgcgtcgcc gggcgtcgcc aaagtcgtgc ggtgcctgcg ggtcgggccg
      901 cagcgcatcg tcgtgttcga catgccgccg ctgctggccg gcgatgacgt gctcgcgttc
      961 gcgccgcatg tggatgcctt actcgtcgtc gtcgccgagg gcgtcacgac gcgagagacc
     1021 ctgtcggcgg cgaaggagct cataaaggga ttcaacgtcg tcggcaccgt gctgaaccgt
     1081 tcctccgaag gctctgcgaa tcactactac gcctacggtt actcttgaag gaagcgctca
     1141 agaacctcgc gatggtgtcc gtgccatcgc tggcgctggt tctgcttgtg ctcgaggtcg
     1201 tcttcaggac ggcgattccc gccgccgcga ggcctcaggc gttcttcgac gcgacgacct
     1261 cgatctggaa gctcgaccgt tcggttcagg ccgaaggatt ggcgacgatc ggcaagctcg
     1321 cgcagcaacg cgcgcgctgg cgcatcaaca acgagggctg gaacagcccg atcgactacg
     1381 cgacggagaa atcgcggagt agggtggccg tgatcggcga ttcctacgtc gaggccttgc
     1441 aggtcgacat cgagcgcagt tatccgaacc tgctcgcctc ggagctcgga tcggcgtggg
     1501 aggtctacgc gttcggcgtc agcggcgcgc cgctttcgca gtatctgcac atggcccgct
     1561 acgttgtggc gcgtttctcg cccgacgtgc tcgtgctgaa cctcgtccac aacgacttca
     1621 ccgagagcta tgccgacacg cctgaaggca gcggcggcgt
//
LOCUS       DATCUD010000288         2697 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73941, whole genome shotgun sequence.
ACCESSION   DATCUD010000288 DATCUD010000000
VERSION     DATCUD010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73941"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VIQ99_04195"
     CDS             complement(<1..382)
                     /locus_tag="VIQ99_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEY9182376.1"
                     /translation="MSRKVTIALDAMGGDRGPDAVVPAALATLERDDSVALTLVGLPD
                     VLEQVKRQAGDRYDSRLAFKKASEVVLMDEPPADALRRKKDSSLRIAIELVKNGEADA
                     CVSSGNTGALMATARYVLKTLPGID"
     gene            complement(424..621)
                     /gene="rpmF"
                     /locus_tag="VIQ99_04200"
     CDS             complement(424..621)
                     /gene="rpmF"
                     /locus_tag="VIQ99_04200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012971092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEY9182377.1"
                     /translation="MAVQKSRKTPSRRNMRRAHDALTGPTLAVDATTGVTHRRHHVTA
                     DGFYRGKKVFEIPQAQDAEQE"
     gene            complement(646..1137)
                     /locus_tag="VIQ99_04205"
     CDS             complement(646..1137)
                     /locus_tag="VIQ99_04205"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceD family protein"
                     /protein_id="HEY9182378.1"
                     /translation="MSGSLHAWYSLRELESLAAREVALTGDLDLGKLTRLKGLLHSDA
                     GSVRASLRFRQRRDGWVGVELTYQAAVHLVCQRCLEPFRDELTDRVDIVLADAASVPS
                     AVPEGFEPFELEGGRLLPAQLIEDELIVAIPLVAKHARIEDCGGLARTLAKLSDRSES
                     VDR"
     gene            1200..1784
                     /locus_tag="VIQ99_04210"
     CDS             1200..1784
                     /locus_tag="VIQ99_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012345652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HEY9182379.1"
                     /translation="MPRLILASTSRYRRELMSRLGLPFEVQSPAVPEDALAGETPAAM
                     AARLALAKARSIVTPGALVIGSDQVASLDGQLLRKPGVPDVAVAQLLACQGRTVLFHT
                     AAAVVATDSGATAEHVDVTEVRFRRLDVAALTEYVRREQPLDCAGSFKSEGLGVALFE
                     QISSRDPTALIGLPLIWLADALRGLGADPLAARS"
     gene            complement(1744..>2697)
                     /locus_tag="VIQ99_04215"
     CDS             complement(1744..>2697)
                     /locus_tag="VIQ99_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015279532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEY9182380.1"
                     /translation="QQREVDSETAGQRLDNFLLGQLKGVPRSHVYRLIRSGQVRVNSG
                     RTTPGYRLQAGDRVRVPPVAVKPTAVPVATPENLDWLAERIIHEDSRILVVDKPAGLA
                     VHGGSSISLGVIEALRLLRPTAKDLELAHRLDRGTSGCLVLAKRRSALRVLHELLREG
                     RVDKKYMTLVKGRWPEDATTIDAPLVTRRVGGEARVKVDPSGKEARSSFRLLERFGKT
                     ASLLEVSIATGRTHQIRVHAAHAGHPVAGDERYGDDDFNAYLRTFGLRRMFLHAHSLS
                     FTWPETGEEFNASVPLPDELKAVLNALEVKNAPPAGRRPAP"
BASE COUNT          442 a          927 c          861 g          467 t
ORIGIN      
        1 gatcgatgcc gggcagcgtc ttcaaaacgt agcgcgcagt cgccatcaat gcaccggtgt
       61 tgccggagct cacgcaggca tcggcttcgc cgttcttgac gagctcgatc gcgatccgca
      121 gcgacgagtc tttcttgcga cgcaacgcgt cggccggggg ctcgtccatg agcacgacct
      181 cgctggcctt tttgaaggcg agccgcgagt cgtagcgatc gccggcttgg cgtttgacct
      241 gctccaggac gtcgggcagg ccgacgagag tcagggcgac cgagtcgtcc cgctcgagcg
      301 tcgcgagcgc tgccggcacc acggcgtccg gtccacgatc gccacccatg gcgtccaagg
      361 cgattgtgac cttgcgactc atcgggtctt gagaaaagcc ggcgacgtct tgagcgtcag
      421 cgactactct tgctcagcgt cttgcgcctg cgggatctcg aagaccttct tgccgcgata
      481 gaagccatcc gcggtgacgt gatggcgtcg gtgcgtgact cctgtagtgg catccactgc
      541 caatgtcggg ccggtcaatg catcgtgggc acgacgcatg ttacgccggg aaggcgtctt
      601 gcggctcttc tgaactgcca tgatgaaatc tcctcgaaca aaccttcaac ggtcgacgct
      661 ttccgaccgg tcactcagct tggccagtgt tcgggccaag cccccacaat cttcgatccg
      721 ggcgtgcttg gccaccagag gaatcgcgac gatgagctcg tcctcgatca actgtgccgg
      781 cagcaaccga cccccttcca actcgaacgg ctcgaacccc tcgggcacgg ccgacggcac
      841 cgaagccgca tccgcaagca cgatatccac gcggtccgtc agctcgtcgc gaaacggctc
      901 gaggcaacgc tgacacacga ggtgcaccgc agcctggtac gtgagctcga cgcctaccca
      961 accgtcgcgg cgctgtcgaa aacgcagcga tgctcttaca ctgccggcgt ccgagtggag
     1021 caggcccttg agccgtgtca gcttgccgag atcgagatct cctgtgagcg caacctctcg
     1081 ggcggccaac gattccagct cgcgcagact gtaccaagcg tgcagcgagc cggacatggc
     1141 cgcgcatgat atgtgagcag gtttctgacg tcaaaaccgt gagttacgta gccagagcca
     1201 tgcctcgact gatcctcgcc tcgacgtccc gttaccgccg cgagctcatg tcccgcctcg
     1261 gcctgccgtt cgaggtccaa agccctgccg tgccagagga cgcgctggcc ggcgaaacgc
     1321 cggccgccat ggccgcccgg ctggctctgg caaaggcgcg cagcatcgtg acacccggcg
     1381 cgttggtgat cggctcggat caggtggcct cgttggacgg gcagttgctg cgcaaacccg
     1441 gcgttcccga cgtcgcagtg gctcagctct tggcctgcca aggcagaacg gtgttgttcc
     1501 ataccgccgc ggccgtcgtc gcgaccgact ccggcgccac ggccgagcac gtcgacgtga
     1561 ccgaggtcag gtttcgccgc ctcgacgtgg cggcgttgac cgaatacgtt cgccgcgagc
     1621 agccgctcga ctgcgccggg agcttcaagt ccgagggcct cggcgtcgcg ctgttcgagc
     1681 agatctcgtc gcgcgacccc acggcgctga tcgggctccc gctgatttgg ctggccgatg
     1741 cgctcagggg gctgggcgcc gacccgctgg cggcgcgttc ttgacctcga gcgcgttcag
     1801 cacggctttc agctcgtccg gcaacggcac gctggcattg aactcctcgc cggtctcggg
     1861 ccacgtgaac gagagcgagt gcgcgtgcag gaacatccgg cgtaagccga acgtgcgcag
     1921 gtaggcgttg aagtcgtcat cgccgtaacg ctcgtcgccg gccacggggt gccccgcgtg
     1981 cgcggcgtga acgcggatct gatgcgtgcg ccccgtcgcg atcgacacct cgagcaacga
     2041 cgccgtcttg ccgaaccgct cgagcaaccg gaacgagctg cgagcttcct taccggacgg
     2101 atcgaccttc acgcgagcct cgcccccgac ccgccgcgtc acgagcggcg catcgatcgt
     2161 ggtcgcgtct tcgggccatc gacccttcac gagcgtcatg tacttcttgt cgactcgtcc
     2221 ttctcgcagc aactcgtgca gcacgcgcaa ggcgctgcgg cgcttcgcga gcaccagaca
     2281 ccccgacgtg ccgcggtcga gccggtgcgc gagctcgagg tccttcgcgg tcgggcgcag
     2341 caacctcaag gcctcgatca cgcccaagct gatgctgctg ccgccgtgca ctgcgaggcc
     2401 ggcgggcttg tcgacgacga gtatccgcga gtcctcgtgg atgatccgct ctgcaagcca
     2461 atcgagattc tcgggcgtgg cgaccggaac ggccgtgggc ttcaccgcaa ccggcggcac
     2521 acgcacgcgg tcgccggctt ggaggcggta gccaggcgtc gtgcgcccgg aattcacccg
     2581 cacctgtccg gagcgaatca gccggtagac atggctccgc ggcacgccct tcagctgccc
     2641 gagcaggaag ttgtcgagtc gttgcccggc cgtttcggaa tcgacctctc gctgctg
//
LOCUS       DATCUD010000289         1734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_38325, whole genome shotgun sequence.
ACCESSION   DATCUD010000289 DATCUD010000000
VERSION     DATCUD010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38325"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..1238)
                     /locus_tag="VIQ99_04220"
     CDS             complement(153..1238)
                     /locus_tag="VIQ99_04220"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY9182381.1"
                     /translation="MKTTLALGALLGVAAAASAQSPASSFARGTGQQAWQNPGLADVL
                     AKCATKPQPFRIGGGAPRPEDLQPPPEPAAAPPSTAIPGVIAAGQNWKVVWHWEGNNA
                     DGPIAGDNGTMLFANNDASNVMELDPATGLAKIVHDDVNTGGAVSRSKNGALFVLSRG
                     LGGGVLQLEPQRKMLANTFRGEPFECIGGVPNDLTADSRGGVYISITGAGVFYANPQG
                     VVTQFGGAITGANGIILSPDEKTLYVTNGPVVVSFAVQADGSLTNQNNEFARLRGGQG
                     GDGSAVDSEGRLYVATGASIDVFAPSGEFLGTIPAPQGTHGTAFGGRDKKTLFGIVFY
                     GGWGTPSARNRVIAIPTIAQGYLGRAK"
     gene            complement(1261..>1734)
                     /locus_tag="VIQ99_04225"
     CDS             complement(1261..>1734)
                     /locus_tag="VIQ99_04225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9182382.1"
                     /translation="LRGKIATQQVAVMGQSCGGFLSVSLGADPRVDTIGVFNSGLQTA
                     NAGAPAGRFPTMDAIKNVHGPVLLVNGAERDFMTAASEATFDAIDHVPAFYGARAGAG
                     HTATVFHPGGGEYANVASNWLRYTFKKDQKAGTMFVGSNCGLCTNPNWVVKSKGL"
BASE COUNT          258 a          600 c          568 g          308 t
ORIGIN      
        1 gagtgtcccg cgcgcgataa acctcgccca tgccgcccgc gccgagcgga gcgaccactt
       61 cgtagggacc cagacggaca cctgtcacga gtctcacggt acctcggcct cgatgatcga
      121 agcggcggtt ttggccgccg aggaagcggg acctatttcg cgcgtcccag gtaaccctgt
      181 gcgatcgtcg ggatcgcgat cacgcggtta cgcgcgctcg gtgtgcccca accgccgtag
      241 aacacgatgc cgaacaacgt cttcttgtcg cgcccgccga acgcggtgcc gtgcgttccc
      301 tgcggcgccg gaatcgtgcc caagaactcg ccgctcggcg cgaacacgtc gatcgacgcg
      361 ccggtcgcca cgtagagacg gccttcggag tcgaccgcgg aaccgtcgcc gccttgaccg
      421 ccgcggagcc gcgcgaactc gttgttctgg ttcgtcagtg agccgtcggc ttgcaccgcg
      481 aacgagacca cgaccgggcc gttcgtgacg tacagcgtct tctcgtctgg gctcaggatg
      541 atgccgttgg ctcccgtgat cgcgccgccg aattgcgtga cgacgccctg cgggttcgca
      601 tagaaaacgc cggcgcccgt aatgctgatg tagacgccgc cgcggctgtc ggccgtgagg
      661 tcgttcggca cgccgccgat gcattcgaac ggctcgccgc ggaacgtgtt cgcgagcatc
      721 ttgcgctgcg gctcgagctg cagcacgccg ccgcccaaac ctcgcgacag gacgaacagc
      781 gcgccgttct tgctgcgcga gacggcaccg cccgtgttca cgtcgtcatg gacgatcttg
      841 gcgagccccg tcgcggggtc gagctccatg acgttgctcg cgtcgttgtt cgcgaacagc
      901 atcgtgccat tgtcgccggc gatcgggccg tcagcgttgt tgccctccca gtgccacacg
      961 accttccaat tctggccggc cgcgatgacg cccgggatcg ccgtcgaggg cggcgctgca
     1021 gccggctccg gcggcggttg taggtcctcg ggcctcggtg cgccgccgcc gatccgaaac
     1081 ggctgcggct tcgttgcgca tttcgcgagc acgtccgcga ggccgggatt ctgccaggcc
     1141 tgctggccgg tgccgcgtgc gaacgaggaa gcagggctct gcgcggaggc cgctgccgcg
     1201 acaccgagca gtgcgccgag agcaagcgtt gttttcatgg tgctcatccc gagctcgtcg
     1261 ctagagccct ttcgatttga cgacccagtt cggattcgtg cacaggccgc agttgctgcc
     1321 gacgaacatc gtgccggcct tctggtcctt cttgaacgta tagcgtaacc agttcgacgc
     1381 tacgttcgcg tactcgcctc cacccgggtg gaacacggtc gccgtgtgcc cggcgccggc
     1441 tcttgcgccg tagaacgccg gcacgtgatc gatcgcgtcg aacgtcgctt ccgacgcggc
     1501 cgtcatgaag tcgcgctcgg caccgttcac gagcagcacg ggcccatgca cgttctttat
     1561 tgcgtccatg gtcgggaaac ggcccgcggg cgcgcccgcg ttcgcggttt gcaagcccga
     1621 gttgaacacg ccgatcgtgt cgacgcgtgg gtcggcgccc aggctcaccg acaggaatcc
     1681 gccgcacgac tgacccatga ccgcgacctg ttgggtcgcg atcttgccgc ggag
//
LOCUS       DATCUD010000290         1739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31301, whole genome shotgun sequence.
ACCESSION   DATCUD010000290 DATCUD010000000
VERSION     DATCUD010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31301"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1140
                     /locus_tag="VIQ99_04230"
     CDS             <1..1140
                     /locus_tag="VIQ99_04230"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEY9182383.1"
                     /translation="FIEQAQAGASLHCALYEIHFRPVLDALLAAKGRGVDVQVLYGAT
                     PGSSTTDTNNDALVQIGSPAFFKPRTKAKIAHNKFIVLSQGTGPKQVWTGSTNLSNNA
                     FYGQLNVGHALKNATVARKFKKLWDELAADPETGPLRARIEAIAPLDAASTLPHQVIF
                     SPYKGLAVYDYYVALAKSATAAVFMTYPFGMSKEFRAAYDANDGVLRYALLDKYVNGG
                     NAASRKAATDDTIRIRKHPNVGMALGERVFTDDVDGWRKERSPIGVNVNWVHTKFMVI
                     DPLSSSPTVVSGSANWSEPSTNQNDENMLVIRDDARVADIFFGEFMRVFAHHRFREAL
                     ARHLEQFGNADTWKPSELKTKPADWVPKHYDVGGEYEIRRRYFVS"
     gene            1179..>1739
                     /locus_tag="VIQ99_04235"
     CDS             1179..>1739
                     /locus_tag="VIQ99_04235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9182384.1"
                     /translation="MPTRRDFLALAAATLTTVATRGSAQPRAMPARAIPGTHETLPIV
                     GLGSTRPVTAIAERGPGAIAAVIRTLVDHGGRVIDTWPRSDSNDGAFGDIISAPDLRE
                     RLFVTINLEQQGAEAGRAHFERTLRLYRRETIDLVNVGSLIDLDAQWPNLRAFKDDGR
                     ARYIGVTAAQAALYDRLEAFVERERPD"
BASE COUNT          316 a          585 c          576 g          262 t
ORIGIN      
        1 ttcatcgagc aggcgcaggc cggcgcgagc ctgcactgcg cgttgtacga gatccatttc
       61 aggcccgtgc tcgatgcgct cctcgcggcc aagggtcgcg gagtcgacgt gcaagtgctg
      121 tacggcgcga cgccgggatc cagcacgacg gacacgaaca acgacgcact cgttcagatc
      181 ggctcaccgg cgttcttcaa gccgcgcacg aaggccaaga tcgcgcacaa caagttcatc
      241 gtgctgtcgc aaggcacggg accgaagcag gtgtggacgg gctcgacgaa tctctcgaac
      301 aacgcgttct atggccagct gaacgtcggc cacgcactga agaacgcgac cgtcgcgagg
      361 aagttcaaga aattgtggga cgagctcgcc gccgaccccg agaccggccc gttgcgcgcc
      421 cgcatcgagg ccatcgcgcc gctcgacgcg gccagtacgc tgccgcacca ggtgatcttc
      481 tcgccataca agggcctcgc cgtctacgac tattacgtgg cgttggcgaa gagcgcgacc
      541 gcggcggtct tcatgacgta cccgttcggc atgtcgaagg agtttcgtgc ggcctacgac
      601 gcgaatgacg gagtcctgcg ctacgcgttg ctcgacaagt acgtgaacgg cggcaatgcc
      661 gcgagccgca aggctgcgac cgacgacacg atccgcatcc gcaagcatcc gaacgtcggc
      721 atggcgctcg gcgagcgagt gttcacggac gacgtggacg gttggcgcaa ggagcgctcg
      781 ccgatcggcg tcaacgtgaa ctgggtccac acgaagttca tggtgatcga cccgctgagc
      841 tcgtcgccga ccgtcgtctc gggctccgcg aactggagcg agccgagcac caaccaaaac
      901 gacgagaaca tgctcgtgat tcgcgacgat gcgcgcgtcg ccgacatctt cttcggcgag
      961 ttcatgcgcg tcttcgcgca tcaccggttt cgcgaggcgc tcgcccggca cctcgagcag
     1021 ttcggcaacg ccgacacgtg gaagccgagc gagctcaaga cgaagcccgc ggactgggta
     1081 ccgaagcact acgacgtggg cggcgagtac gagatacggc ggcgctactt cgtgagttga
     1141 gcgctccgcg gctgcggtat ccttggcgca tgcaatcgat gccgacccgc cgcgacttcc
     1201 tggcgctcgc agccgcgacg ttgacgacgg tcgccacgcg cggctccgcc caaccgcgtg
     1261 cgatgcccgc gcgcgcgatc cccggcacgc acgagacgct gccgatcgtc gggctgggct
     1321 cgacgcggcc cgtcacggcg atcgcggagc gtgggccagg ggccatcgcg gccgtcatcc
     1381 gcacgctcgt cgaccacggc ggccgcgtga tcgacacgtg gccgcgcagc gactccaacg
     1441 acggcgcgtt cggcgacatt atcagcgcgc ccgatttgcg cgagcgccta ttcgtcacga
     1501 tcaacctcga gcagcaaggc gccgaggcgg gccgcgcgca tttcgagcgc acgcttcgct
     1561 tgtatcggcg cgagacgatc gacctcgtga acgtcggcag cttgatcgat ctcgacgcgc
     1621 aatggccgaa cctgcgcgcg ttcaaggacg acgggcgcgc gcgctacatc ggcgtcacgg
     1681 ccgcgcaggc cgcgctgtac gatcggctcg aggcgttcgt ggaacgcgag cgaccggat
//
LOCUS       DATCUD010000291         5283 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_73953, whole genome shotgun sequence.
ACCESSION   DATCUD010000291 DATCUD010000000
VERSION     DATCUD010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5283)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73953"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VIQ99_04240"
     CDS             <1..523
                     /locus_tag="VIQ99_04240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182385.1"
                     /translation="ERGTGTAVFLELADWAVGRFPDTSVFLMSTGGHEYFFAGSHRVL
                     HEAPPPEKTSVWAHIGATLAARSSEQRDGRLVMLDTVDPSRSLMATETARAAAATAFR
                     GLTGLEQAVGVRPQAGELSTFTDRGYSRAFAVIGQHAWFHTVEDTLERVDAALLTPVL
                     RAHQRAIELLAAG"
     gene            541..1245
                     /locus_tag="VIQ99_04245"
     CDS             541..1245
                     /locus_tag="VIQ99_04245"
                     /inference="COORDINATES: protein motif:HMM:NF015534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HEY9182386.1"
                     /translation="MTLIAGHRGSRHFGTKPYLGRALALTGREDPRVLYIGAASDDDS
                     TFGEALAALLVVAGAREVLWPKLTGQRRQVAAARKAIADVNLIFVGGGDVEAGMQALR
                     DADLIAALTAAAARGVVFVGMSAGAIMLGERWIRWPREDAGDNEAETYECLGLARCSL
                     DTHGEGDDWAEARAFVAVRAREQGRQARAYGVPSGGALVVAAGGTISACGRSVPVFVA
                     GPHKEATIETTLFPDQ"
     gene            1242..2492
                     /locus_tag="VIQ99_04250"
     CDS             1242..2492
                     /locus_tag="VIQ99_04250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182387.1"
                     /translation="MTYSPAHWQRVGEETRRMVAEVPLYADRPQPPIDPREVDRWLKQ
                     VPPVGKRDLRRGFPKSLVRQHQDLHAAMRDEQVTLLATSGTTADRLQVIWEWSWWDPQ
                     EREAMRLNALIANAMGRGDYREAVLTTPACGAGTCHFGSQTADERKIDGILFFNEGAD
                     PTHWTERDCERMLNEWREFAPRGIEADPAYLAIIARAALRLGIAVPPPAFITLTYETT
                     TRAMRRDIGRAFAAPMFQLYGATEAGVLFMECEHGRLHPNERHSHVDLVPLPGPNRLA
                     RVLVTTLGRAWMPLLRYDIGDVVRVAEPRDCACGLRSDGPLLERVEGRQSDCTEVDGA
                     TVTPLMLDDAIHSALGPAATIEQWQLAGDTLQVVDPTPRADAAVTAAAAAAAVGALLE
                     QSIRGEAVGAIAPEASGKYRLVKR"
     gene            2492..3664
                     /locus_tag="VIQ99_04255"
     CDS             2492..3664
                     /locus_tag="VIQ99_04255"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: protein motif:HMM:NF012488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEY9182388.1"
                     /translation="MRVQGFPLLERGYDGAPFIYLDSASTTPKPREVIAAVNRYYETL
                     GANVHRGLYPTAEASTEEYERARHRVAAFIGAQPAEIVFTRNATDSFNLLARALKLKS
                     DDEVVFPASEHHSNYLPWHLTAKARLVDIDDEAVPKWSELPSRLTKRTRLVSVAHVSN
                     VTGAIAPIEEWIATAHAAGVPVMVDASQSVAHLPLDVRALDVDFLAFSSHKMFGPNGV
                     GVLFVRRDRFEGLGFGNVGGGMVAMLGEQGFEPLEAPFRYEAGTPNIEGTIGLGAAVD
                     YLLRIGMRKIEAHSRSLAAELMRGLADVPNATVLGRSVRERIALATVSLPWPAMRQQD
                     IARLLADAHGIYVSGGFHCAHVLHSRLRLDGTLRASAHIFNDPGDIEAFVRALRDL"
     gene            3676..4326
                     /locus_tag="VIQ99_04260"
     CDS             3676..4326
                     /locus_tag="VIQ99_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011462449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEY9182389.1"
                     /translation="MRIDFVSDVACPWCAIGFSALERAIDRVGTDAGEIELHLQPFEL
                     NPTMAAEGADAGEYLQAKYGLSAEQLAANRARIAERGAAEGFSFGERTHVWNTFDAHR
                     LLFFAGVEGPPGSQRALKRALLRAYHGEGRNPGAHDVLLDLAGRVGLPVERAREVLER
                     GELAEEVRQAERFWQEVGIHSVPAIIIDRRHLISGGQPSAVFEQALREIAAGEAGR"
     gene            4413..4913
                     /locus_tag="VIQ99_04265"
     CDS             4413..4913
                     /locus_tag="VIQ99_04265"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9182390.1"
                     /translation="MKRLYPALFAFAVVGFGPSALAAPEYTTIELSIDIAKPAKDVWA
                     KIGGYCDISKWLNSVDCKITSGDGGIGTVRDLAGGRVTEILVAETELSYGYTQPVREG
                     QFYNLYHGFMEVRPVTPTTSKVLYTLMYDISDKADQAAKDADIARRRTMFEGALQNMK
                     TLAEAP"
     gene            4928..>5283
                     /locus_tag="VIQ99_04270"
     CDS             4928..>5283
                     /locus_tag="VIQ99_04270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182391.1"
                     /translation="MDFPRVVVALAAVAGSAAAAQAQTTSMNDLAERYVRLVLAVGQH
                     DADYVDAYYGPPEWRTAAQERKRSLAEIDADASAALESLAGMSPPGAPEIVRLRHEYL
                     TRQLESLRARVAMLGG"
BASE COUNT          821 a         1757 c         1882 g          823 t
ORIGIN      
        1 cgagcgcggc accggcaccg ccgtgttcct cgagctcgcg gattgggcgg tgggccggtt
       61 tcccgatacg tccgtgttcc tgatgagcac gggcggtcac gagtacttct tcgcgggctc
      121 acaccgcgtg ctgcacgagg cgccgccgcc cgagaagacc tcggtctggg cgcacatcgg
      181 cgcgacactc gcggcgcgga gctccgagca acgcgacggt cgactcgtca tgctcgacac
      241 cgtcgacccg agccgctcgc tgatggcgac ggaaacggcg cgcgcggcgg ctgcgaccgc
      301 gtttcgcggc ttgaccgggc tcgagcaggc ggtcggcgtg cgcccgcagg ccggcgagct
      361 ctcgacgttc acggatcgag gctactcgcg cgcgttcgcc gtgatcggac aacacgcgtg
      421 gttccacacg gtcgaggaca cgctcgagcg cgtcgatgcg gcgctgttga cgccggtgct
      481 gcgcgctcat caacgcgcga tcgagctgct cgcggccggt tagcgacgtt gctgaagccc
      541 gtgacactga tcgccggcca ccgcggcagc cggcacttcg gcaccaagcc gtacctcggc
      601 cgggcgctgg ctctgaccgg ccgggaggat ccgcgtgtgc tctacatcgg tgcggccagc
      661 gacgacgatt cgaccttcgg cgaggcgctt gccgcgttgc tcgtcgtggc cggagcgcgc
      721 gaggtgctgt ggccgaagct gaccggccag cggcgccagg tggccgcggc gcggaaggcg
      781 atcgcggacg tgaacctgat attcgtcggc ggcggtgacg tcgaagcagg catgcaggca
      841 ctgcgggacg ccgatctgat agctgcgctg acggcggcgg ccgcccgggg cgtcgtgttc
      901 gtgggcatgt cggccggggc catcatgctc ggcgagcgct ggattcgctg gccgcgcgag
      961 gatgccggcg acaacgaggc cgagacctac gagtgcttgg gcctagcgcg ttgctcgctc
     1021 gatacgcatg gcgagggcga cgattgggcc gaggcgcgcg cgttcgtcgc ggtccgggcg
     1081 cgcgagcagg ggcgccaggc cagggcctac ggcgtgccga gcggcggtgc actcgtcgtc
     1141 gctgccggtg gcacaatatc ggcgtgcggc cggtccgtgc ccgtgttcgt cgcggggccg
     1201 cacaaggaag cgacgatcga gaccacgttg ttccccgacc aatgacgtac tcacccgcac
     1261 actggcagcg tgtcggcgag gaaacacggc gcatggtcgc cgaggtgccg ctgtacgccg
     1321 atcgtccgca gccgccgatc gatccgcgcg aggtcgaccg ctggctcaaa caggtgccgc
     1381 ccgtcggcaa gcgcgatctg cggcgcgggt ttccgaaatc cctcgtgcgc cagcatcagg
     1441 acctgcacgc cgcgatgcgc gacgagcagg tcacgttgct tgcgacgtcc ggcacgacgg
     1501 cagaccgact ccaggtcatc tgggaatggt cgtggtggga tccgcaggaa cgcgaggcca
     1561 tgcggttgaa cgcgctgatc gcgaacgcga tgggccgcgg cgactatcgc gaagccgtgc
     1621 tgacgacgcc ggcgtgcggc gccggcacgt gtcacttcgg cagccagact gccgacgagc
     1681 gcaagatcga tgggatcctg ttcttcaacg aaggcgccga ccccacgcat tggacggaac
     1741 gcgattgcga gcggatgctg aacgagtggc gcgagttcgc gccgcgcggc atcgaagccg
     1801 atcctgcgta tctcgcgatc atcgcgcgcg ccgcgctgcg gcttgggatc gctgtgccgc
     1861 cgccggcgtt catcacactg acctacgaaa ccacgacgcg cgcgatgcgg cgcgacatcg
     1921 gccgggcgtt cgcggcgccg atgttccagc tgtacggcgc gaccgaggcc ggcgtgctgt
     1981 tcatggaatg cgagcacggg cggctgcatc cgaacgagcg gcacagccac gtcgacctcg
     2041 tgccgttgcc gggaccgaac cggctcgcgc gcgtgctcgt gaccacgctg ggccgcgcct
     2101 ggatgccgct cctccgctac gacatcggcg acgtcgtgcg ggtagccgag ccccgcgatt
     2161 gcgcttgcgg cctgcgcagc gatgggccat tgctcgagcg cgtcgagggc cggcagagcg
     2221 actgcacgga ggtcgacggc gcgaccgtga cgccgctgat gctcgacgac gcgattcact
     2281 cggcgctggg gccagcggcg acgatcgagc agtggcagct cgccggcgac acgctgcagg
     2341 tcgtcgatcc gacgccgcga gcggacgcag cggtcacggc cgccgcggcc gccgcggccg
     2401 tcggggcgtt gctcgagcaa tcgatccgcg gcgaagccgt cggcgcgatc gcgcccgagg
     2461 catcgggtaa gtatcgcctc gtcaaacgct gatgcgtgta caaggtttcc cgctgctcga
     2521 gcgcggctac gacggcgcgc cgttcatcta tctcgacagt gcgtcgacga cgccgaaacc
     2581 gcgcgaggtc atcgccgcgg tgaaccgtta ctacgaaacg ctcggcgcca acgtccatcg
     2641 cggtctctat cccacggccg aagcatcgac ggaggagtac gagcgcgctc ggcaccgcgt
     2701 ggcggcgttc atcggggcgc agccggccga gatcgtgttc acgcgcaatg cgaccgattc
     2761 cttcaacctc ctcgcgcgtg cgctgaagct caagagtgac gacgaggtcg tttttcccgc
     2821 ctccgagcac cactcgaact acttgccctg gcacctgacc gcgaaggcac ggctcgtcga
     2881 catcgacgac gaggccgtgc ccaagtggtc cgagcttccg tcgcgtctga cgaaacgcac
     2941 gcggctcgtc agcgtcgcgc acgtctcgaa cgtcacgggc gcgatcgcgc cgatcgagga
     3001 atggatcgcg accgcgcacg cggccggtgt gcccgtgatg gtcgacgcgt cgcagtccgt
     3061 cgctcactta cccctcgacg tgcgcgcact cgacgtggac ttcctcgcgt tctcgagcca
     3121 caaaatgttc gggccgaacg gcgtcggcgt gctgttcgtg cggcgcgacc ggttcgaggg
     3181 tctcggtttc ggcaatgtcg gcggtggtat ggtcgcgatg ctcggggagc agggcttcga
     3241 gccgctcgag gcgccgttcc ggtacgaggc cggcacgccg aatatcgaag gcacgatcgg
     3301 gctcggcgcg gccgtcgact atttgctgcg gatcggcatg cggaagatcg aggcgcactc
     3361 gcgctcgctg gccgcggaat tgatgcgcgg cctcgccgac gtgcccaacg ctaccgtgct
     3421 gggccgctcg gtgcgcgagc ggatcgcgct cgcgaccgtg tcgctgccgt ggccggccat
     3481 gcggcaacag gacatcgcgc gcctgttggc cgacgcgcat ggcatctacg tgtcgggagg
     3541 atttcactgc gcacacgtgc tgcacagtcg cctccgtctc gacggcacct tgcgcgcgtc
     3601 ggcgcacatc ttcaacgatc cgggcgacat cgaggcgttc gtgcgggcgt tgcgggactt
     3661 atagaggaga aggcagtgag gatcgacttc gtttccgacg tcgcttgtcc ctggtgcgcg
     3721 atcggcttca gcgctctcga gcgcgccatc gatcgcgtcg gcaccgacgc cggagagatc
     3781 gagctgcatt tgcagccgtt cgagctgaac ccgacgatgg cggccgaggg tgccgacgca
     3841 ggggagtact tgcaggccaa gtacgggctc agcgcggagc agctcgccgc gaatcgcgcg
     3901 cggatcgccg agcgcggcgc cgccgagggc ttcagcttcg gcgagcgcac gcacgtgtgg
     3961 aacaccttcg acgcgcatcg gttgctgttc ttcgccggag tcgagggccc gccgggatcg
     4021 caacgtgccc tgaagcgtgc gctgctgcgc gcgtaccacg gcgaaggccg gaatcccgga
     4081 gcgcacgacg tgttgctcga cctagcgggg agggtgggtc tgccggtcga gcgagcgcgc
     4141 gaggtgctcg agcgcggtga gctcgccgag gaggttcgcc aagccgagcg tttctggcaa
     4201 gaggtgggca tccactcggt gcccgcgatc atcatcgatc gccgccacct gatctcgggt
     4261 gggcaaccga gcgccgtgtt cgagcaggcg ctgcgggaga tcgcagccgg cgaagcgggg
     4321 cgctgaggca agccgtggac cggaccgcgt cggcccgttg caaactcgcg cgtttaccaa
     4381 cactatcggc cggcggtccg caggagaact acatgaaacg cctctatccc gctttgttcg
     4441 catttgccgt cgtcggcttc ggcccgtccg cgttggccgc gcccgagtac acgacgatcg
     4501 agctttcgat cgacatcgcg aagccagcga aggacgtgtg ggcaaagatc ggcggctatt
     4561 gcgacatctc gaagtggctg aacagcgtcg attgcaagat cacgtccggc gacggcggta
     4621 tcggcaccgt tcgcgacctg gccggcggac gcgtcacgga gatcctcgtt gcggagaccg
     4681 agctctcgta cggctacaca cagccggtcc gggaaggaca gttctacaac ctgtatcacg
     4741 gcttcatgga agtgcggccc gtgacgccca cgacgtcgaa ggtgctgtac acgctgatgt
     4801 acgacatctc ggacaaagcg gatcaggcgg ccaaggacgc ggacatcgca cgccgccgca
     4861 cgatgttcga aggtgcgctg caaaacatga agacgctcgc cgaggcgccg tagcgcgagc
     4921 cagggccgtg gactttccgc gcgtcgtcgt tgcgctggcc gcagtggccg gtagcgccgc
     4981 ggcggcgcag gcgcagacga cttcgatgaa cgatctcgcg gagcgttacg tgcggctcgt
     5041 gctcgcggtc ggacagcacg atgccgacta cgtcgatgcg tactacggcc cgcccgagtg
     5101 gcgcaccgcc gcgcaggagc gcaagcgatc cttggccgag atcgatgcgg acgcctccgc
     5161 cgcgctcgag tcgctggcag gcatgtcgcc gcctggcgca cccgagatcg tccggctccg
     5221 gcacgagtat ctgacccgtc agctcgagtc actgcgcgcg cgcgtcgcga tgctgggcgg
     5281 cca
//
LOCUS       DATCUD010000292         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81011, whole genome shotgun sequence.
ACCESSION   DATCUD010000292 DATCUD010000000
VERSION     DATCUD010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81011"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..>1502)
                     /locus_tag="VIQ99_04275"
     CDS             complement(139..>1502)
                     /locus_tag="VIQ99_04275"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9182392.1"
                     /translation="LPRLDAIGFDGRVFGFAAATAAVVALVVGLIPAMRAGGGVEDAR
                     PYGGVRSRTPRLLVLRRALVVAQVALATVLLASAGLLLRSVERIFTVPTGFDASQTVA
                     MQVVATGTGISSRAEMQVLFEQVLEAVRAVPGVVEAALANHLPLSGSLNERYGMSMEA
                     TPGDPANTTYVGDPFRYTVTPQWFATMGIPLVRGRLLGPEDVPGGPQAILVNESFAAR
                     FAGRDPIGQRVRIGAQGPDLPMATIVGVVGDVRHASLASAPSNAFYVRMGQWNWVDAA
                     QTLVVRTAGDSVSFVPSIKQAVWSVNPSLPVMRVTRMADLVAKSEARRTFALAVFAAF
                     GVAALLLAGVGVYGVIEQRVTERTREIGLRSALGATPARLVAFVLAQGLILVAIGLGI
                     GLAAAAGAAQGIASLLFGIESFDLITYVGVAVLLLAVAFVASYAPAFRAARIDPAITL
                     RAD"
BASE COUNT          283 a          527 c          498 g          194 t
ORIGIN      
        1 aagatcgcgg ccgtggcgcc gagcccgagc gcgagcgtca gcaccgtgat cgcggtgagc
       61 ccgcgcgtgc gccagaagcc gcgcagcgca taggcagtgt cggcacgaaa gtcggcgtag
      121 agattaccca tacggtcctc agtctgctcg caaggtaatg gcggggtcga tgcgtgccgc
      181 gcgaaacgcc ggcgcgtagc tcgcgacgaa cgcaacggcc aggagcaaca ctgcgacgcc
      241 gacgtaagtg atgagatcga agctctcgat gccgaacagc agcgatgcga tgccctgcgc
      301 cgctccggcg gccgccgcga gcccgatccc gaggccgatc gcgaccagga tcaacccctg
      361 tgccagaacg aacgcgacca gccgcgccgg cgtggcgccg agcgccgagc gcaggccgat
      421 ctcgcgagtc cgctcggtca cgcgttgctc gatgacgcca tacacgccga cgcctgcgag
      481 caacagcgca gcgacaccga atgccgcgaa caccgcgagc gcgaacgttc gacgcgcctc
      541 ggatttcgcg acgaggtcgg ccatcctcgt gacgcgcatg accggcaagc tcggattgac
      601 ggaccaaacg gcctgcttaa tcgacgggac gaacgacacc gagtcgcctg ccgtccgtac
      661 gacgagcgtc tgggcggcgt cgacccaatt ccactgcccc atcctgacgt agaacgcgtt
      721 cgatggcgcc gatgcgagcg atgcgtgcct cacgtcgccg acgacgccga cgatggttgc
      781 catcggtagg tccgggcctt gcgcaccgat gcgaacgcgc tgaccgatgg ggtcgcggcc
      841 cgcgaagcgg gcggcgaatg actcgttcac gagaatcgcc tgcggaccgc cgggcacgtc
      901 ctcgggcccg agcaagcgcc cacgcacgag cgggatgccc atcgtcgcga accactgcgg
      961 cgtgacggtg taacggaacg ggtcgcccac gtaagtcgtg ttcgcaggat caccaggcgt
     1021 ggcttccatg ctcatgccgt atctctcatt caagctaccg ctcaagggca gatggttcgc
     1081 caacgccgcc tcgacgacac cgggcactgc acgaacggcc tcgagcacct gctcgaagag
     1141 aacctgcatt tccgcgcgcg agctgatacc cgttccggta gcgacgactt gcatcgcgac
     1201 ggtctgcgaa gcgtcgaagc ccgtgggcac ggtgaagatc cgttcgacgc tgcgcagcaa
     1261 cagcccggca ctcgcaagca gcaccgtcgc gagcgccacc tgcgcgacga cgagcgcacg
     1321 gcgcagcacg agtagtctcg gagtcctcga gcgcacgcct ccgtagggtc gagcgtcctc
     1381 gacgccgccg cccgcgcgca ttgccgggat gagccccacg acgagagcga cgaccgccgc
     1441 cgtcgccgcg gcgaatccga agacgcggcc gtcgaagccg atcgcgtcga ggcgcggcag
     1501 cg
//
LOCUS       DATCUD010000293         1614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31317, whole genome shotgun sequence.
ACCESSION   DATCUD010000293 DATCUD010000000
VERSION     DATCUD010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31317"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..523)
                     /locus_tag="VIQ99_04280"
     CDS             complement(17..523)
                     /locus_tag="VIQ99_04280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182393.1"
                     /translation="MTNKRILGGLAAAAFTATAVPVYAHHSFSIFDASQTKTFTGVVT
                     RVNPDANHLQIFFAPMNEERKNVERGADGKPIVWAVEMAGSAASAQSGISVSAFPAGT
                     IFTVSLHPLRSGEPAGAREGALYKCPAKTPPAAGKHCDTVEGSVAIGAGFIDPAQQQQ
                     QARPAGSN"
     gene            complement(575..>1614)
                     /locus_tag="VIQ99_04285"
     CDS             complement(575..>1614)
                     /locus_tag="VIQ99_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182394.1"
                     /translation="ATIGDNPPASAAWGHCDRDYPREAIVSPYPFKTAQEHYAALLAE
                     TKARGGKTPTAEQLGDWTGRYMHPGNTTDAQADWTGRNRSTNPQSYWYRARHNQMTTF
                     LSLLTPEYQTRMVQEAYHAGHTNAPQWPSQYCWPEGFMRRWHEFAVWEWHVIAAPSVV
                     QIVTGVARNFITTIHVGREFKMDGSVPRLGQDVPRWYGETIGFWDGDTMITWTSNIQG
                     WKVHSAFEYSNKMQTIEIYTPNRDPSGKFLGLNHEAIFYDPEALVEPVRIVRNYVKTS
                     GYDSGDPYVFIDCVQTIFPIEGRSTPVAPGTEIQYEVPDMYGRPWAHIWEKYFEQGMQ
                     KPEAEDIFSFD"
BASE COUNT          257 a          524 c          509 g          324 t
ORIGIN      
        1 tgcgtgagcc gtccgcctag ttcgagccag cgggccttgc ttgctgctgt tgctgagcag
       61 ggtcgatgaa gccggcaccg atcgccacgc tgccttcgac ggtgtcgcag tgcttgccgg
      121 ccgcgggagg cgtcttcgcc gggcacttgt acaacgcgcc ttcgcgcgcg cccgcgggct
      181 cgccgctacg cagcgggtgc aacgagaccg tgaaaatcgt tcccgccggg aacgcgctga
      241 cggagatgcc gctctgcgcc gacgcggccg agccggccat ctcgacggcc cacacgatcg
      301 gcttgccgtc cgctccacgc tcgacgttct tgcgctcctc gttcatcggc gcaaaaaaga
      361 tctgcaggtg gttcgcgtcc ggattcacgc gcgtcacgac accggtgaag gtcttcgtct
      421 gcgacgcgtc gaaaatcgaa aacgagtggt gcgcgtaaac gggcacggcg gtggccgtga
      481 acgcagcggc tgcgaggccg ccgaggatgc gcttgttggt catatacgag actccttctg
      541 tctcaattta tccggaattc tacttcggga tagcttaatc gaagctgaag atgtcttctg
      601 cttcgggttt ctgcatccct tgctcgaagt acttctccca gatatgggcc cagggccggc
      661 cgtacatatc gggaacttcg tattgaatct ccgtgccggg cgcgaccggc gtcgagcggc
      721 cttctatcgg gaagatcgtt tggacgcagt cgatgaagac gtacgggtca cctgagtcgt
      781 atccgctggt cttcacgtaa ttgcgaacga ttcgcacggg ctccacgagc gcctcgggat
      841 cgtaaaagat cgcctcgtgg ttcaggccca ggaacttgcc ggacgggtcg cggttcggcg
      901 tatagatctc gatcgtttgc atcttgttcg agtactcgaa ggcgctgtgc accttccagc
      961 cctggatgtt cgacgtccaa gtgatcatcg tgtcgccgtc ccagaacccg atcgtctcgc
     1021 cgtaccagcg cggcacgtcc tgaccgaggc gcggcacgga cccgtccatc ttgaactcgc
     1081 ggccgacgtg gatcgtcgtg atgaaattgc gtgcgacgcc cgtgacgatc tgcacgaccg
     1141 acggcgccgc gatcacgtgc cactcccaca ccgcgaactc gtgccagcgg cgcatgaagc
     1201 cctccggcca gcagtattgc gacggccact gcggcgcgtt cgtgtggccg gcgtgatagg
     1261 cctcctgcac catccgcgtc tgatactcgg gggtcagcag cgacaggaac gtcgtcatct
     1321 ggttgtgccg cgcgcgatac caatatgact gcgggttcgt gctcctgttg cgccccgtcc
     1381 aatccgcctg cgcatccgtc gtgttgccgg gatgcatgta gcggccggtc cagtcgccga
     1441 gctgctccgc ggtcggggtc ttcccaccgc gcgccttcgt ctcggcgagc aacgccgcgt
     1501 agtgctcttg cgccgtcttg aacggatacg ggctcacgat cgcctcgcgc ggatagtcgc
     1561 ggtcgcaatg gccccaagcc gccgacgccg gcgggttgtc accgatcgtg gccg
//
LOCUS       DATCUD010000294         1505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3041, whole genome shotgun sequence.
ACCESSION   DATCUD010000294 DATCUD010000000
VERSION     DATCUD010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3041"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..743
                     /locus_tag="VIQ99_04290"
     CDS             <1..743
                     /locus_tag="VIQ99_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009577229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY9182395.1"
                     /translation="GLLRSQRSEVVKCLSHDLVVPANAEITLEGFLSPGEEAVEGPFG
                     DHTGYYNEAERFPVMTIERITHRREPIYHTTYTGRPPDEPAILGLALNDVFVPILQTQ
                     FPEIVDFYLPSEACSYRVAVVSIRKEYPGHAKRVMFGVWSYLRQFMYTKIVIVVDADI
                     DARKWSDVIWAISTRVDPKRDSVLVESTPIDYLDFASPVPGLGSKLGIDATTKWRGEV
                     DREWGRPITMRPDVVAKIDDLWNELGLE"
     gene            839..1486
                     /locus_tag="VIQ99_04295"
     CDS             839..1486
                     /locus_tag="VIQ99_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012636603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY9182396.1"
                     /translation="MRHILVTNAKGGCGKSTIATSLAAYFASEGYATALADFDVQASA
                     LTWLEQRPADYAPITPVRGFETGLKTVPRNTEFVVIDSPAGAYGSALTDLVRRAETIV
                     VPVLPSPIDIKAAERFIEQLLNIAKVADKKAKAALVANRVKENTLIFEELDDVLSRLK
                     VPYVASFREAQNYIRAYQRGLGIHELPPYLAWPDWEQWDPLIEWLDSRRSQPKAG"
BASE COUNT          272 a          496 c          484 g          253 t
ORIGIN      
        1 cgggcctgtt gcggagccag cgctccgagg tcgtgaaatg cctgagccac gatctggtcg
       61 tgcccgccaa cgccgagatc acgctcgagg gcttcctctc ccccggggag gaggccgtcg
      121 aagggccgtt cggcgatcac acgggctatt acaacgaggc cgagcgcttc ccggtcatga
      181 cgatcgagcg catcacgcac cgccgcgagc cgatctatca cacgacctat acgggacgcc
      241 cgcccgacga gcccgcgatc ttgggcctcg cgttgaacga cgtgttcgtg ccgatcctgc
      301 aaacgcaatt ccccgagatc gtcgacttct acctgccgag cgaggcgtgc tcgtatcgcg
      361 tggccgtcgt cagcatccgc aaggaatatc cggggcacgc gaagcgcgtg atgttcggcg
      421 tgtggtcgta cctgcgtcag ttcatgtaca cgaagatcgt gatcgtcgtc gacgccgaca
      481 tcgacgcgcg caagtggtcc gacgtgatct gggcgatctc gacgcgcgtc gaccccaagc
      541 gcgacagcgt gctcgtcgag tcgacgccga tcgactacct cgacttcgcg tcgccggtcc
      601 cgggcttggg ctcgaagctc ggcatcgatg cgacgacgaa atggcgcggc gaggtcgatc
      661 gcgagtgggg tcgcccgatc acgatgcgcc cggacgtcgt cgcgaagatc gacgacctgt
      721 ggaacgagct cggtttggaa tgagcgcggc cgatggacat ttgtcataac cctggctaac
      781 ttagccgggc ccgtgccctt cggttcggcg aacaacaaca aaggcaggcc agaagcccat
      841 gcgacacatc ctcgtcacga acgccaaagg cggctgcggc aagagcacga tcgcgacgag
      901 cctcgcggct tactttgcgt cggagggata tgcgactgcg ctcgccgatt tcgacgtgca
      961 ggcttcggcg ctgacctggc tcgagcagcg gccggccgac tacgccccga tcactccggt
     1021 gcgcggcttc gagacgggct tgaagaccgt gccgcgcaat accgagttcg tcgtgatcga
     1081 ttccccggcc ggcgcctacg gcagcgccct gaccgacctc gtgcgccggg ccgagacgat
     1141 cgtcgtgccc gtgctgccgt cgccgatcga catcaaggcc gccgaacgtt tcatcgagca
     1201 gctgttgaac atcgcgaagg tcgccgacaa gaaagccaag gccgcgctcg tcgcgaatcg
     1261 cgtcaaagag aacacgctga tcttcgagga gctcgacgac gtgctgtcgc gcttgaaggt
     1321 cccgtatgtc gcgagcttcc gcgaggcgca gaactacatc cgcgcgtacc agcgcgggct
     1381 cggcatccac gagttgccgc cgtatctcgc gtggcccgat tgggagcaat gggacccgct
     1441 gatcgaatgg ctcgattcgc ggcgctcgca accgaaagcc ggctgacgct gtactcgccg
     1501 cgcgt
//
LOCUS       DATCUD010000295         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31330, whole genome shotgun sequence.
ACCESSION   DATCUD010000295 DATCUD010000000
VERSION     DATCUD010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31330"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1834
                     /locus_tag="VIQ99_04300"
     CDS             <1..1834
                     /locus_tag="VIQ99_04300"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182397.1"
                     /translation="VPLPVVAALVALAALPSMSAAQAQGPRAGAPELTEQQRLRAQSP
                     GGGLTPGVELPSWPEAASRLDRVSPVTDEMLDNPAPNDWLSWRRTRDGLGFSPLSSID
                     KRNVGSLQLAWSLSLPAGPNTATPLVHDGVIYVHSFGDHVQALDAATGDELWHYAREL
                     PSTFRPTVKRNMALYGDKLYVGTSDVHVVALDVRSGAVVWDTAIAAEGSGFGLSGGPL
                     VARGKVMQGVNGQAPGGAYIVALDAESGEEAWRFYSIARPGEPGGNSWNGLPLEKRTG
                     GSVWTAGSYDAERNLAFFGPAPTYDTGPLRDPVAQRGITNDALYTNATIALDPDTGKL
                     VWHFQHVPNDQWDFDWAFERQIVTLPVDGRARRVVLTAGKEAIYDALDLDDAGRYLFS
                     IDLGLQNFITAIDPRTGAKTIDPKLVPSREEAIVVCPHAGGAKSWVPSAINPSTRVLF
                     VPLVESCMDLTPVPLEQRGSLSTGVRWTIRPRQDSDGRYGRIQAIDLTTRETLWIERQ
                     RAPQTTGVLATAGGLVFAGSLDRVLTAYDDATGDALWHAKLNDVPSSAPISYAVDGKQ
                     YVAITVGHGSAHALTFPMLTPEIDLPVVRSATIWVFALPGRPTP"
     gene            complement(1906..>2549)
                     /locus_tag="VIQ99_04305"
     CDS             complement(1906..>2549)
                     /locus_tag="VIQ99_04305"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEY9182398.1"
                     /translation="APPGGLFVAQRYRGQEGAANDAPVFSTLGSIGVNGFVMQDLNAN
                     PLDYDTATYRARREQISPWLDSTDPDLTAFRRSGGKLIVIVGTDDTIAPSGEQLDYYE
                     SLLDEVGRRAVDSFARLYVLPQTGHGLTGNSAPIDGNGQAVQPTAIPSSIDRFALLRE
                     WVENGRAPGMSEVVTSSAGSRPMCSYPTYPRYAGGPPEAAGSYVCAAPSSQRH"
BASE COUNT          400 a          864 c          881 g          404 t
ORIGIN      
        1 cgtgccgtta ccggttgtcg cggccctcgt tgcgctcgcg gcgttgccat cgatgtctgc
       61 agctcaggct caagggccgc gggctggggc gccggagctg acggagcagc agcgcttgcg
      121 cgcgcagagc ccgggcggcg ggctcacgcc gggcgtcgag ctgccgagct ggcccgaggc
      181 cgcgagccgg ctcgaccgtg tctcgccggt cacggacgag atgctggaca accccgcgcc
      241 gaatgactgg ctgagctggc gtcgcacgcg cgacggcctc ggcttctcgc cgctgtcgag
      301 catcgacaag cgcaacgtcg gcagccttca actcgcgtgg tcgctgtcgc tgccggccgg
      361 tccgaacacg gccacgccgc tcgtgcacga cggcgtcatc tacgtgcact cgttcggcga
      421 tcacgtgcag gcgctcgatg ccgcgacggg tgacgagctg tggcattacg cgcgcgagct
      481 cccgagcacg ttccggccta cggtcaagcg caacatggcg ctctacggcg acaagcttta
      541 cgtcggcact tcggacgtgc acgtcgtggc gctcgacgtg aggtcgggtg ccgtggtttg
      601 ggacacggcc attgcggcgg agggcagcgg cttcggcctg agcggcggac cgctcgtggc
      661 acgtggcaaa gtcatgcagg gcgtgaacgg gcaggctccg ggtggcgcct acatcgtcgc
      721 cctcgatgcc gagtccggcg aggaggcgtg gcgcttctat tcgattgcac gcccgggcga
      781 gccgggcggc aatagctgga acgggttgcc gctcgagaag cgcaccggcg gctcggtctg
      841 gacggccggc agctacgacg ccgagcgcaa tttggcgttc ttcggcccgg cgccgactta
      901 cgacaccgga ccgctgcgcg accctgtggc ccagcgcggg atcacgaacg atgcgctgta
      961 caccaacgcg acgatcgcgc tcgatcccga caccggcaag ctcgtgtggc acttccagca
     1021 cgtgccgaac gatcagtggg acttcgactg ggcgttcgaa cgtcaaatcg tcacgctgcc
     1081 cgtcgacggc cgcgcgcgcc gcgtcgtgct gacggccggc aaggaggcca tatacgacgc
     1141 cctcgatctg gacgacgccg ggcgctatct cttctcgatc gatctcggct tgcagaactt
     1201 catcacggcc atcgacccgc gcacgggcgc caagacgatc gatccgaagc tcgtgccctc
     1261 gcgcgaggaa gcgatcgtcg tgtgcccgca cgccggcggc gccaagagct gggtgccgag
     1321 cgcgatcaac ccttcgactc gcgtgctgtt cgtgccgctc gtcgagtcgt gcatggacct
     1381 cacgcccgtg ccgctcgagc aacgcggctc gctctcgacc ggcgtgcgct ggacgatccg
     1441 gccgcgacag gacagcgacg gccgctacgg ccggatccaa gcgatcgatt tgacgacgcg
     1501 cgagacgctt tggatcgagc ggcagcgcgc gccgcagacg accggcgtgc tcgcgacggc
     1561 gggcggcctc gtgttcgcag ggtcgctgga ccgcgtgctc acggcttatg acgacgcgac
     1621 cggcgatgcg ctctggcatg cgaagttgaa cgacgtgccg agctcggcgc cgatcagcta
     1681 cgccgtcgac ggcaagcagt acgtcgcgat aacggtgggc cacggctcgg cgcacgcgct
     1741 gacgtttccg atgctgacgc ccgagatcga cttgcccgta gtacgcagcg caacgatctg
     1801 ggttttcgcg ctcccgggcc gaccaacacc gtgatggacc gtgatttcac ggcaacgccg
     1861 cagtgtgcag tcgctgcggt cggccgcgta cgacccgtga aggggtcagt gccgctgtga
     1921 cgacggcgcc gcgcaaacgt aagagcccgc ggcttccgga gggccaccgg cgtagcgcgg
     1981 atacgtagga tacgagcaca tcggccggct gcccgcggag ctcgtgacga cctcgctcat
     2041 gcccggtgct cgaccgttct ctacccactc gcgcagtaac gcaaatcggt cgatgctgct
     2101 cgggatggcg gtcggttgca ccgcttggcc gttgccgtcg atcggggccg agttgcccgt
     2161 gagcccgtgc ccggtctgcg gcaacacata gaggcgcgcg aaactgtcga cggcgcgccg
     2221 gcccacctcg tcgagcagcg actcgtaata gtcgagttgc tcgcccgatg gcgcgatcgt
     2281 gtcgtccgtg ccgacgatga cgatgagctt gccgccgctg cgacgaaatg ccgtgagatc
     2341 gggatccgtg gaatcgagcc acggcgaaat ctgctcgcgg cgcgcacggt acgtcgccgt
     2401 gtcgtaatcc agcggattcg cgttcaagtc ttgcatcacg aagccattga cgccgatcga
     2461 gcccaacgtc gagaacaccg gcgcatcgtt cgctgcgcct tcctggccgc gatagcgctg
     2521 cgcgacgaac aagccgccgg gcggcgcca
//
LOCUS       DATCUD010000296         3413 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_9849, whole genome shotgun sequence.
ACCESSION   DATCUD010000296 DATCUD010000000
VERSION     DATCUD010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3413)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3413)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3413
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9849"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VIQ99_04310"
     CDS             <1..649
                     /locus_tag="VIQ99_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182399.1"
                     /translation="LALCAHGDTALANRYEQTPPSANYATALASTYVRWLAALFDRDY
                     ARALNVLDRSSEEPVFDGDFRNSFTPKSLLYARTHLLAGNRTEAMRHFEQTKVAIELQ
                     LTAQEGEGQALTSLYVALAEVEAVLGDPDRARESLARAAPLTSVTQRSATRFAIATRV
                     LLPLGEHEPALRDLDAYLSGPAGCTIERLLADPQLDPVRDEPEFAALVAKHQSTQ"
     gene            769..972
                     /locus_tag="VIQ99_04315"
                     /pseudo
     CDS             769..972
                     /locus_tag="VIQ99_04315"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            995..1156
                     /locus_tag="VIQ99_04320"
     CDS             995..1156
                     /locus_tag="VIQ99_04320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182400.1"
                     /translation="MSQIVALPYSPGTLSRITECGLRMSTYSISPLIAKSATFRVERD
                     RRVMREADE"
     gene            1341..2513
                     /locus_tag="VIQ99_04325"
     CDS             1341..2513
                     /locus_tag="VIQ99_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182401.1"
                     /translation="MPVDSRRGRVALMAAHCAGMVDLVALSIWVGALIAHYGFDPQRA
                     GGLPTLFLVGAVVASVTLAPRIQRLRGRWVAAIGFGISALAFWIAASVTGYAQLAVLH
                     AVAGVAAGAALSVTHGTIARSANPHRLFAIVGMALGVFAIVFLAGTPQLIAALGGSAL
                     FHAFAAVMALGALASLLAFPTPENESGAGERAAKPAALPKVVWFGIVGISCMTLVQAM
                     IFSFLEPAGLRRGFDQASINGVLIALGLVNLLPAALAALLQKHLAARKVLLVGPVVQV
                     ALGATIMTSRVFEPYAFAAAFLAAVMIFTHTFAFGLLARLDLSGRALTGTPAMLMIGS
                     AVGPFLGGTLVNAFGYESLAVAAACLAAVAVTCFARLPAREAVHEHGALTQSGDAA"
     gene            complement(2528..3085)
                     /locus_tag="VIQ99_04330"
     CDS             complement(2528..3085)
                     /locus_tag="VIQ99_04330"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182402.1"
                     /translation="MQWTNRSAIAAALLLGAVACTPSVSPDAALLEIADRTLIRELMD
                     RYGTVHDSGTPEEYADLFTGDGEIAIGGGPVLVKGREALMAQAQRDHDRFGETDANGR
                     WTSIMRHLISNAQIELTGDTTAEGTCYVTTVVRKGDVGPTILSISRYVDRYVKADGQW
                     RIARREIFLEFGNAELAAQMGFTGG"
     gene            3166..>3413
                     /locus_tag="VIQ99_04335"
     CDS             3166..>3413
                     /locus_tag="VIQ99_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182403.1"
                     /translation="MRFIRWRLNAAVLGLPSLLTGIAAAHHSTAEFDYTKQLTIQGKV
                     KEVQWTNPHSYIQLLVPGDDGKPVEWSVEIGSPSLNINL"
BASE COUNT          548 a         1102 c         1133 g          630 t
ORIGIN      
        1 cctcgcgttg tgtgcccatg gcgacacggc actcgcgaat cgttacgagc agacaccgcc
       61 gtccgcgaac tacgcgaccg cgctcgcatc aacgtacgtg cgatggcttg cggctctctt
      121 cgatcgcgac tatgcccggg cgttgaacgt cctcgaccgc tcgagtgagg aaccggtttt
      181 cgacggcgac ttccgcaatt ccttcacacc gaagtccctg ctttacgctc gaacccacct
      241 attggcaggc aaccgaacgg aagcgatgcg gcatttcgag cagacgaaag ttgccatcga
      301 gctacagctg acggcgcagg aaggtgaggg acaagcgctg acgtcactgt acgtcgcgct
      361 tgcagaggta gaggccgtgc tcggcgaccc cgacagagcc agggagtcgc tcgcacgtgc
      421 cgctccgctc acgtccgtga cgcaacgttc ggcgacacgg tttgcgatag cgacgagagt
      481 gctactaccg ctcggagagc acgagccggc gctgagagac ctggatgcct acctcagcgg
      541 tcccgccggc tgcacgatcg agcggttgct cgcagatcct cagctagacc ctgttcgcga
      601 cgagccggag ttcgccgcac tggttgcaaa gcaccagagc acgcagtgag ttagggcgcg
      661 gccgtgggca ccgtcgctta gcgtgcgctg cgacacgcga cggaaaggac gtatgatgcg
      721 cgccctcggc cgagcgcagg ccgatcgcca gcggggagcg gtcacgacat gtcctttccg
      781 gacggttcgc ggctcgaccc gtacgagatc gtcgcgctgc ttggcagcgg cggaatgggc
      841 gaggtctatc gcgctcacga cgcgcgcctc ggccgcgacg tggcgatcaa agtgctccct
      901 cgcgagttca cgtccgattc ggatcgtctc gcgcgtctcg agcgagaagc gcgggcgctg
      961 gcggcgctca atcacccgaa cgctgctgaa ctcgatgtcc cagatcgtgg cgctgccgta
     1021 ttcgccaggg accttgagcc gcatcaccga gtgcggattg cgcatgtcga cgtactcgat
     1081 ctcgccgctg attgcgaagt ccgcgacgtt tcgtgtcgaa cgcgatcggc gagtgatgcg
     1141 tgaagccgat gagtagcagg aacgtaagcg tagcggccac gcgccaataa gatggcgcga
     1201 ttgctgccat cgcgtgtcgc gatggaaggt cgcgcgggaa agccgtgcga gacgcatata
     1261 ctggccccgc ggcatcgcag tcggcagttc cgccgttgtc gcgcgcgttc gagctcggaa
     1321 cgaggagcgt cgaggtgagc atcccagtgg acagtcggcg tggccgcgtc gcgttgatgg
     1381 cggcgcattg cgccggcatg gtggacctcg ttgcgttgtc gatctgggtg ggcgcgttga
     1441 tcgcccacta cggtttcgat ccgcagcgcg caggcggact cccgacgctg ttcctcgtgg
     1501 gggccgtggt cgcgagcgtg acgctcgcgc cgcggattca gcgcctgcgc ggcagatggg
     1561 tggccgcaat cgggttcggc atttcggcgc tggccttctg gatcgccgcg agcgtcacag
     1621 gctacgcgca actcgcggtg ctgcatgcgg tcgccggcgt cgccgccgga gcggctttga
     1681 gcgtgacgca cggcacgatc gcacgaagcg cgaacccgca ccgattgttc gccatcgtcg
     1741 gcatggcgct cggcgtattc gcaatcgtct tcttggctgg cacgccgcaa ctgattgcgg
     1801 cgcttggcgg ctcggcgctc ttccatgcgt tcgcggccgt catggcgctc ggcgcgttgg
     1861 cgtccttgtt ggcgttcccg acgcccgaaa acgaatccgg cgccggcgag cgggcagcga
     1921 agccggcggc gctgccgaaa gtcgtgtggt tcggcatcgt cggcatctcg tgcatgacgc
     1981 tggttcaggc gatgatcttc agctttctgg agcccgcggg gcttcgccgc ggtttcgacc
     2041 aagcttccat caacggcgtg ctgatcgcgc tcggactcgt gaacctgttg cccgcggcgc
     2101 tggccgcgct gctgcaaaag cacctggcgg cgcgcaaggt gttgctcgtc ggaccggtgg
     2161 tccaggtcgc cctcggcgcg acgatcatga cgtctcgagt gttcgagcct tatgccttcg
     2221 ccgccgcgtt cttggccgca gtgatgatct tcacgcacac gttcgcgttc ggtttgctcg
     2281 cacgcctcga cttgagcggc cgcgcgctga cggggacgcc ggcgatgctg atgataggtt
     2341 cggcggtcgg cccgttcctt ggcgggacct tagtcaacgc attcggctac gaatcgctgg
     2401 ccgtcgccgc ggcgtgcctc gccgccgtcg cggtgacgtg cttcgcgcgc ttgccggcgc
     2461 gcgaggctgt gcacgagcac ggtgcgctca cgcagtcggg cgacgcggca tgagcgcgcg
     2521 gcggcaatca accgcccgtg aaccccatct gcgccgcgag ctcggcgtta ccgaactcga
     2581 ggaaaatctc gcggcgcgcg atgcgccact gcccatccgc tttgacgtag cgatccacat
     2641 agcgagaaat gctgaggata gtgggcccca cgtctccttt cctgacgacg gtcgtcacgt
     2701 agcacgtacc ttctgccgtc gtgtcgccgg tcagctcgat ctgcgcgttg ctgatcaggt
     2761 gccgcatgat cgacgtccaa cggccgttcg cgtccgtctc tccgaagcga tcatggtcgc
     2821 gttgcgcctg cgccatcagc gcttcgcggc ccttgacgag cacggggccg ccgccgatgg
     2881 cgatctcgcc gtccccggtg aacaaatctg catactcttc gggcgtgccc gagtcgtgca
     2941 cggtcccgta ccgatccatg agctcgcgga tcaaagtgcg gtcggcgatc tcgagaagtg
     3001 ccgcgtcggg cgaaacgctc ggagtgcagg cgaccgcacc gagcagcagt gccgcagcga
     3061 tcgcgcttct gttcgtccat tgcatcgtgc gactccatcg ggtaactcgc ggcattatat
     3121 tggccgcgca aacagctgcc atacagtcac atcagggggg atgccatgcg cttcattcgt
     3181 tggcgactga atgccgccgt gctcgggttg ccatcgctgc tgacgggaat tgccgcagcg
     3241 catcattcca cggccgagtt cgactacacg aagcagctca ccatccaggg caaagtgaag
     3301 gaggtgcagt ggacgaatcc gcactcctac attcagctgc tcgtgcccgg tgacgacgga
     3361 aagccggtgg agtggtccgt cgagatcggc tcaccgagcc tgaacatcaa cct
//
LOCUS       DATCUD010000297         2787 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24319, whole genome shotgun sequence.
ACCESSION   DATCUD010000297 DATCUD010000000
VERSION     DATCUD010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24319"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..323)
                     /locus_tag="VIQ99_04340"
     CDS             complement(<1..323)
                     /locus_tag="VIQ99_04340"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9182404.1"
                     /translation="MRKNIWLAIALVGVTASAHAQFGTEPSKLELIKVQDDLYVIHNE
                     YVPGNTTALITNDGVILVDDKFEIDADNIVAELKKVTSQPIKYVINTHYHGDHSGGNA
                     KLQAGG"
     gene            609..1355
                     /gene="tatC"
                     /locus_tag="VIQ99_04345"
     CDS             609..1355
                     /gene="tatC"
                     /locus_tag="VIQ99_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012316001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY9182405.1"
                     /translation="MASLPLDPDTANAARSLLKGALELRSRAFKAILTLLAAFLALLP
                     FADRIFSIVSEPLMAAMPEGSSMISKQVASPFLTPMKATFWVALFLVMPLLLYHIWKL
                     VDSWLPATQRKVALPFIASSAALFYVGAAFAFLFVLPMVFQFFTSVAPPGVKVMTDIN
                     AFLSFTLGMVFAFGFAFQVPIIIVTIVWTGLVSRKTLAGARPYVLLAAFVIGMVLTPP
                     DVFSQTLLAVPMYALFELALFVCARLMPDR"
     gene            complement(1320..>2787)
                     /gene="rlmKL"
                     /locus_tag="VIQ99_04350"
     CDS             complement(1320..>2787)
                     /gene="rlmKL"
                     /locus_tag="VIQ99_04350"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: protein motif:HMM:NF008748.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008990 - rRNA
                     (guanine-N2-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HEY9182406.1"
                     /translation="AFRAYDKDAAAVRATLDNATRAGFAKVIHAERRELKDLPAAPAP
                     HGLVAVNPPYGERLGETEMLAPLYALLGEKLKQNFVGWQAAVFTGNPPLGREIRIRAK
                     RTHTMFNGPIECRLLRFDVDPKHFETKRVPGSLPVFDADAARARPGAAMFANRLRKNF
                     ASLGEWARREGIACYRVYDADMPEYAFSIDIYAAAVGAEAERRVYVQEYAPPATIEAA
                     KARARREEAFSVLPEVLGVSNDRVHVRTRRKQKGGAQYEKLAERGEFEVVTEGGLELE
                     VNFTDYLDTGLFLDHRPTRARIRELAGGKRFLNLFAYTGTASVFAAAGGARSTTSVDL
                     SRTYLDWARRNLDRNGFSDESRHALLQEDVLQWLETRTSERYDLIFLDPPTVSRSKRM
                     DAELDLQRDHVELIRSTLLKLVPDGLLIFSNNFRKFRLDAAGLADLDVKDVTAATIPK
                     DFARNPRIHQCFEIRVPKGAVRMPRAVLSIGHKARTDE"
BASE COUNT          441 a          904 c          892 g          550 t
ORIGIN      
        1 ccgcccgcct gcaacttcgc gttaccgccg ctgtggtcac cgtgataatg cgtgttgatc
       61 acgtacttga tcggctggct cgtgaccttc ttcagctccg caacgatgtt gtcggcatcg
      121 atctcgaact tgtcgtcgac gaggatcacg ccgtcgttcg tgatcagcgc ggtcgtgttg
      181 ccgggaacgt attcgttgtg aatcacgtac aggtcgtcct ggaccttgat cagctcgagc
      241 ttcgagggct ccgtgccgaa ctgtgcgtgc gccgaggctg tgacgccgac gagcgcgatt
      301 gcgagccaga tgttcttcct catgcttgat gactccaggg tgcggtggcg agccaagatg
      361 gtactacacg gacgcgacag ctctccaagg cggccttgcc cagcataagc cgttgtcggg
      421 ccagcggtgt ttggctaggc gagatccaac gaaatcttat gaacagagac gatcagcaga
      481 gatcacctct cgagctgcca ctggcaactt tcgacacgcg tttgggtcgc gcggcatgcc
      541 caaggcggca gggagtgtcg aaagcgtcgg tccggtttct gggcgcctcg ctcgactaga
      601 atggtgtcgt ggccagccta ccgctcgacc ccgacactgc aaacgccgcg cgcagcctgc
      661 tgaagggcgc gctcgagctg cgctcgcggg ccttcaaggc gatcctgacg ctgctggcgg
      721 cgttcctcgc gctcctccca ttcgcggacc gcattttcag catcgtgtcc gagccgttga
      781 tggcagcgat gccggaaggc tcgagcatga tcagcaagca ggtcgcgtcg ccgttcttga
      841 cgccgatgaa agcgacgttc tgggtcgccc tgttcctcgt gatgccgctg ctgctgtacc
      901 acatctggaa gctcgtggac tcttggttgc cggccaccca acgcaaagta gccctgccgt
      961 tcatcgcctc gagcgctgcg ctgttctatg tcggcgcagc gttcgcgttc ctattcgtgc
     1021 tgccgatggt atttcagttc ttcacgagcg tggcgccgcc cggcgtgaag gtcatgaccg
     1081 acatcaacgc gttcttgagc ttcacgctcg gcatggtgtt cgcgttcggc ttcgcctttc
     1141 aggtaccgat catcatcgtc acgatcgtct ggaccgggct cgtgtcgcgg aagacattgg
     1201 ccggagcgcg gccttacgtg ctgcttgcgg cgttcgtgat cggcatggtg ctgacgccgc
     1261 cggacgtgtt ctcgcagacg ctgctcgcgg tgccgatgta cgcgttgttc gagctcgcgc
     1321 tattcgtctg tgcgcgcctt atgcccgatc gataacaccg cgcgcggcat gcgaacggcg
     1381 cccttcggca cacgaatctc gaagcattga tggatccgcg ggttgcgcgc gaagtccttc
     1441 gggatcgtgg cggctgtcac gtccttgacg tcgagatcgg cgaggcccgc agcgtcgagc
     1501 cggaacttcc ggaagttgtt cgagaagatc agcaggccgt cggggacgag cttcagcaac
     1561 gtggagcgga tcagctcgac gtggtcgcgc tggagatcga gctcggcgtc catgcgcttc
     1621 gagcgcgaca cggtcggcgg atcgaggaag atcaggtcat agcgctcgct cgtgcgcgtc
     1681 tcgagccatt ggaggacgtc ttcctgcaac agcgcgtggc gactttcgtc gctgaagccg
     1741 ttacggtcga gattgcggcg cgcccagtcc aaataggtgc gagacagatc gacgctcgtg
     1801 gtcgagcgcg cgcctccggc ggccgcgaac accgacgccg tgcccgtgta cgcgaacaaa
     1861 ttcaggaaac gcttgccgcc ggcgagctcg cggatgcgcg cacgtgtcgg ccgatgatcg
     1921 agaaacagtc ccgtgtcgag ataatccgtg aagttcacct cgagctcgag gccgccttcg
     1981 gtcacgacct cgaactcgcc acgctcggcg agcttctcgt attgagcgcc gcccttttgc
     2041 ttccggcgcg tacgcacgtg cacgcggtcg ttcgaaacgc cgagaacctc gggcagcacg
     2101 ctgaacgcct cttcgcggcg tgcgcgcgcc ttcgcggcct cgatcgtcgc cggcggcgca
     2161 tactcctgca cgtagacccg gcgttccgcc tcggcgccga cggccgcggc gtagatgtcg
     2221 atcgagaacg catactccgg catgtccgcg tcgtacacgc ggtagcaggc gataccttcc
     2281 ctgcgcgccc actcgccgag cgacgcgaag ttcttgcgca gccggttcgc gaacatcgcg
     2341 gcgccgggcc gcgcccgcgc ggcgtcggca tcgaacaccg gcagcgagcc cggcacgcgt
     2401 ttcgtttcga agtgcttcgg gtcaacatcg aaacgcagca accggcactc gatcggcccg
     2461 ttgaacatcg tgtgcgtgcg cttcgcgcgt atcctgatct cgcggccgag gggcgggttg
     2521 cccgtgaaga ctgctgcctg ccaacccacg aaattctgct tcagcttctc gcccagcagc
     2581 gcgtacagcg gcgcgagcat ctcggtctca ccgagtcgct cgccgtaagg cgggttcacg
     2641 gccacgagcc cgtgcggcgc cggcgcggcg ggcaggtctt tgagctcccg ccgctccgca
     2701 tggatcacct tcgcaaagcc cgcccgcgtc gcgttgtcga gcgtcgcgcg cacggctgcg
     2761 gcgtccttgt cgtaggcgcg aaacgct
//
LOCUS       DATCUD010000298         1714 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52706, whole genome shotgun sequence.
ACCESSION   DATCUD010000298 DATCUD010000000
VERSION     DATCUD010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1714
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52706"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1714)
                     /locus_tag="VIQ99_04355"
     CDS             complement(<1..>1714)
                     /locus_tag="VIQ99_04355"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182407.1"
                     /translation="IEIESAGIEKPHDFIALTPSVTIVQTQNPGNSFITIRGVSQARN
                     SDMPVAVVVDGVLMSNPAQFNQQLYDIEQIEVLKGPQGALYGRNAIGGAISIVTRAPT
                     DEFEAKIRVGADSGPGYMAQGDVSGPLGDNFSYRASLSYTDTDGYLDNQYLNTEADPY
                     KDTSARLRLNWHPSDRVSGDFRYSRSEIDTTSLCFVINNDFGFGAVNGISTPVPNDVN
                     DTSVPLRCNNLGEGIKEMDEVSMKWDFTTEGGGTFTSITAYDDLNEILTGDAFDFRPL
                     GQSFNELILGPFVAPTWPWYPFLSADEIRGYNSDWNQSQYLEVSSWSQELRFTSPDDR
                     DLRWIAGAYLLQTDRFIGTGNMVDLGTGVNRVYKVPRSNDGFPFDFTIDNPQVTYLSD
                     SQDNFAWAVFGQLSYDFSERWDATLSLRYDEDTREQTTETPPGFIPAVLAGDLVTGQV
                     REETWDSMQPKLTVRWRPNDTNMIYGDVSRGFRSGGFNQSGVALAGVAGVFNTFDEQI
                     ADTFEVGWKGQFADGRLSTNLAYYDTDLSGAYYFIFLVSSSTQNLGSLDEVHYDGLEL
                     ELNAL"
BASE COUNT          303 a          540 c          537 g          334 t
ORIGIN      
        1 cagcgcgttc agctcgagct cgagaccgtc gtagtgcact tcatcgagac tgccgaggtt
       61 ttgcgtgctc gacgacacga ggaagatgaa gtagtacgcg cccgacaggt ccgtgtcgta
      121 gtaggcgagg ttcgtgctca gccgcccgtc cgcgaactgc cctttccaac cgacctcgaa
      181 cgtgtccgcg atttgctcat cgaacgtgtt gaacacgcct gcgacacccg cgagcgcgac
      241 gccggattgg ttgaagccgc cgctgcggaa gccgcggctc acgtcgccat agatcatgtt
      301 ggtatcgttc ggccgccaac gcacggtcag cttcggctgc atcgaatccc acgtctcctc
      361 gcggacctgc ccggtcacga ggtccccggc gagcacggcc ggaatgaatc ccggcggcgt
      421 ttcggtcgtc tgctcgcgcg tatcctcgtc gtagcgcaac gacagagtcg cgtcccagcg
      481 ctcgctgaag tcgtagctca actggccgaa tacggcccac gcaaagttgt cctgcgagtc
      541 ggatagatac gtgacctgcg ggttatcgat cgtgaagtcg aacgggaaac cgtcgttcga
      601 gcgcggcacc ttgtaaacac gattcacgcc ggtgccgaga tcgaccatgt tgccggtgcc
      661 gatgaatcga tcggtctgca gcaggtacgc gcccgcgatc cagcgcagat cccggtcgtc
      721 cggcgacgtg aacctgagct cctggctcca ggagctgact tcgaggtact ggctctggtt
      781 ccaatccgag ttgtagccgc ggatctcgtc ggcactgaga aacggatacc aaggccaagt
      841 cggcgctacg aaggggccga ggatcagctc gttgaacgac tggccgagcg gccggaagtc
      901 gaacgcgtcg ccggtcagga tctcgttcag gtcgtcgtag gcggtgatcg acgtgaacgt
      961 gccgccgccc tccgtcgtga agtcccactt catcgagact tcgtccatct ccttgatgcc
     1021 ttcgccgagg ttgttgcacc gaagcggcac gctcgtgtcg ttcacgtcgt tcggcaccgg
     1081 cgtgctgatg ccgttgaccg caccgaagcc aaagtcgttg ttgatcacga aacacagcga
     1141 cgtggtgtcg atttccgagc gcgagtagcg gaagtcaccc gacacgcggt cgctcggatg
     1201 ccagttcaag cgcagccggg ccgacgtgtc cttgtacgga tccgcctccg tgttcagata
     1261 ttggttgtcg agataaccat ccgtatccgt gtacgagagc gaggcgcggt agctgaagtt
     1321 gtcgccgagc ggaccgctca cgtcgccttg cgccatgtac cccgggcccg agtcggcgcc
     1381 cacgcgaatc ttggcctcga actcgtcggt cggcgcgcgc gtgacgatcg agatcgcgcc
     1441 accgatcgcg ttgcggccgt atagagcgcc ttgcggcccc ttcaacacct cgatctgctc
     1501 gatgtcgtac agctgctgat tgaactgcgc cggattcgac atcagcacgc catcgacgac
     1561 gacggcgacc ggcatgtcgc tgttgcgtgc ctgcgacacg ccgcgaatcg tgatgaacga
     1621 gttgccgggg ttctgcgtct ggacgatcgt gacgctgggc gtcagggcga tgaagtcgtg
     1681 cggcttctcg atgccggccg actcgatctc gatc
//
LOCUS       DATCUD010000299         1591 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3131, whole genome shotgun sequence.
ACCESSION   DATCUD010000299 DATCUD010000000
VERSION     DATCUD010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3131"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..453
                     /locus_tag="VIQ99_04360"
     CDS             61..453
                     /locus_tag="VIQ99_04360"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182408.1"
                     /translation="MRFAWSVAATLVVALSTGSAAAHHSFAAQYDANQPVTLKGVVTK
                     VEWTNPHARIYIDVTEAGGNVVNWNLELASPNYLKRAGWSSTSLKQGDEVVVEGSLAR
                     SGAKMANARLVTFPDGTRVFSRSAQDGG"
     gene            457..1257
                     /locus_tag="VIQ99_04365"
     CDS             457..1257
                     /locus_tag="VIQ99_04365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182409.1"
                     /translation="MRALRLAVATMAAASAALYAGAQQVPAASTSPAGSGGSTNPALI
                     GAVPDGPVPRLPDGTPDLSGVWVGSGPIGNISTGLLPGEEIVLLPAAEAVMKSRMAAD
                     DPEALCLPTGVPRIAPYPWRLVQAPAYGKATHLFFLFEGNIHSFRQIFMDGREHPDDL
                     EATWYGHSVGHWEGDTLVIETVGFNDLFWFDFVGHPHTTQLRTVERYTRTKVGELEVV
                     TTVDDPGAYAKPFTVKYTHTLRPGWELMEYICNENNQDVEHIRGPAGL"
     gene            complement(1271..1561)
                     /locus_tag="VIQ99_04370"
     CDS             complement(1271..1561)
                     /locus_tag="VIQ99_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008483432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9182410.1"
                     /translation="MTLSMHTLWLAVGFGGQLMFSARFLVQWLVSEKQRRSVIPTAFW
                     YLSIGGGVMLLLYAVYKRDPVFIAGQATGVFIYARNLLLLRGTEPPTGALTT"
BASE COUNT          291 a          511 c          524 g          265 t
ORIGIN      
        1 acgagcgttt cgctacgatc ggcctacaca ctgtacggcg cttgagaagg ggagaggccg
       61 atgcgattcg cttggagtgt cgctgcgacg ctggtcgtcg cgttgtccac gggatcagcc
      121 gcggctcacc actcgttcgc cgcgcagtac gacgcgaacc agcccgtgac gttgaaaggc
      181 gtggtcacca aggtcgagtg gacgaatccg cacgcacgta tctacatcga cgtgaccgag
      241 gcgggcggca acgtcgtgaa ctggaacctc gagcttgcga gcccgaacta tctgaagcgc
      301 gcgggctggt cgagcacgtc gctgaagcaa ggcgacgagg tcgtggtcga aggatcgctc
      361 gcgcgcagcg gcgcgaagat ggcgaacgca cggctcgtga cgttccccga cggcacgcgc
      421 gtcttttcgc gttccgcgca ggacggcggc tagctcatgc gcgcgcttcg actcgcagtc
      481 gcaacgatgg ccgccgcgtc ggcggcgctc tacgccggtg cccagcaagt cccggctgcg
      541 agcacctcgc cggccggtag cggtggctcg accaacccgg cactgatcgg ggcagttccg
      601 gacggcccgg tgccgagatt gcccgacggc acgccggatc tgtccggagt ctgggtcggc
      661 tccgggccga ttggcaacat cagcacggga ctcctgcctg gcgaggagat cgtgctgtta
      721 cctgcggccg aggcagtgat gaaatcgcgg atggcggcgg acgaccccga ggcactctgc
      781 ttgccgaccg gcgtgccgcg aatcgcgccg tatccttggc gcctcgttca ggcgccggcc
      841 tacggcaagg ccacccattt gttcttcctt ttcgagggca acatccacag cttccgacag
      901 atcttcatgg acggccggga gcatcccgac gatctcgagg ccacgtggta cggccactcg
      961 gtcgggcact gggagggcga cacgctcgtg atcgagaccg tgggtttcaa cgatctgttc
     1021 tggttcgact tcgtcgggca tccgcacacg acgcaattgc ggaccgtcga gcgttacacg
     1081 cgcacgaagg tcggggagct cgaggtcgtg actacggtcg acgatcccgg cgcttacgcg
     1141 aagccgttca ccgtgaaata cacgcacacg ctgcgccccg gctgggagct catggaatac
     1201 atctgcaacg agaacaacca ggacgtcgag cacatcaggg ggccggcggg gctctgacgc
     1261 tcgcgcgcgc ttacgttgtc aacgcgccgg tcggcggctc ggttccgcga agcagcagca
     1321 aattcctggc gtagatgaac actccggtcg cctgtccggc gatgaacacg gggtcgcgct
     1381 tgtacaccgc gtaaaggagc agcatgacgc cgccgccgat gctgagatac cagaacgccg
     1441 tcggtatcac gctgcggcgc tgtttctcgc tgacgagcca ctggacgagg aatcgcgccg
     1501 agaacatcag ctgaccgcca aaaccgaccg ccagccacaa tgtgtgcata ctcaatgtca
     1561 taggcgctcc tcctcgaagc tcagagttcg g
//
LOCUS       DATCUD010000300         4056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102302, whole genome shotgun sequence.
ACCESSION   DATCUD010000300 DATCUD010000000
VERSION     DATCUD010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102302"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(93..893)
                     /locus_tag="VIQ99_04375"
     CDS             complement(93..893)
                     /locus_tag="VIQ99_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182411.1"
                     /translation="MKLTVLASALALAALVIADPAAAQRRARNANLPPPGPAPRDADG
                     RAILWGATPDEKGVWTPMFGITDPINPADQTPFQPWARALYDARQIHELEPHTRCKAS
                     GTARQFQTPYGVEFVEMPELERLYIFDIGGPHTFRTVYMDGRSHPRDLEPSYYGHSIG
                     WWDGDTLVIDSVGFNESFWMDRRGMPHTSQLHTIERFTRKDSETIAYEITVDDPGAYT
                     APWKGGFDLGFDRGVELFEYSCQQANYAVELMVGGERSSIDRTSPIVP"
     gene            complement(909..1322)
                     /locus_tag="VIQ99_04380"
     CDS             complement(909..1322)
                     /locus_tag="VIQ99_04380"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182412.1"
                     /translation="MNIRRMAAVILAGSLVSGAALAHHSFSAEFDADKPIKLTGIVTK
                     VEWTNPHVWFYINVKDEATGAVTNWGAEMGPPHGLQRSGWRRETLKIGESVTVDGFMA
                     RNGDNRMNARTVTLTATGGRPGQTLDADSSSRQGN"
     gene            complement(1334..2449)
                     /locus_tag="VIQ99_04385"
     CDS             complement(1334..2449)
                     /locus_tag="VIQ99_04385"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182413.1"
                     /translation="MSRTSLRIGIGLGVALCASLAAAHHPLTAKFDETKQLDLRGLVT
                     NVDWRNPHVHVFVNVTRDGGVVENWAVELESTVLLRRSGWQHDTLKPGDAIEVSGPAA
                     RDGSRQVWGEHVVASATQRQVYNVTDTGPEAPQSPRPTPRGSDGKPLLGVVDGSGGYW
                     AYPSSTVLQQAGANVAMNADGVLARISDAPRVAPFQPWALGLYQHRQQRHLADDPGFL
                     NCKNPGGVRQFQSPYGVQFVEDHARKRMFVLIGSGNRNFRIIYMDGRSPTGQVQGDDD
                     NPLYYGRAVAHWEGDTFVVETTGFNEDFWFTNGGLPHTDQLSLVERFTRPTFDTLRYE
                     VTITDPGAYTQPWSSGWELKWVGGEDLPVYFCQDNRS"
     gene            complement(2446..2850)
                     /locus_tag="VIQ99_04390"
     CDS             complement(2446..2850)
                     /locus_tag="VIQ99_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182414.1"
                     /translation="MTKRLMTAAAAAFLALGLLGTTAAQEGHPLKGSWLGEWAGNSVH
                     GDNILLILDWDGKAITGMINPGTDNMPLTSASLEPSGWVVRLEAEGKDKDGSAVRYVI
                     EGKLENLELPNRSINGTWSSNKGRGAFTASRQ"
     gene            complement(2931..3395)
                     /locus_tag="VIQ99_04395"
     CDS             complement(2931..3395)
                     /locus_tag="VIQ99_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182415.1"
                     /translation="MNKVHATVLGLGLVGALGAFGQSAPPPRQMNVTQGPESVFTRPV
                     AEIMPALAGATATAENGRVGSELVFWGYRQADGRPVFFFACAPKPEFDCADRVRAVCP
                     AASTVLANGHESGTVVRRECRSVSVVAPGDVRPGCEDRVESVPMAVGLVSCG"
     gene            complement(3448..>4056)
                     /locus_tag="VIQ99_04400"
     CDS             complement(3448..>4056)
                     /locus_tag="VIQ99_04400"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9182416.1"
                     /translation="DVPRVSLVAWSLGGPRAGGYASRNPDKVAKLVLLAPGYRRDAPQ
                     TPSQPSPAVGVAFNAQSRADFTANWERQVGCPNQYEPEVADAVWADMLASDPVGASWG
                     QGVRRAPNTTVWGFGRAAVERMQTPTLMVAGAHDKQVVPERVQEYFADLGADNKVLLD
                     LGCASHNAMWESNHLLLFRASLEWLTVGTVEGMAKGTVRLGY"
BASE COUNT          661 a         1394 c         1311 g          690 t
ORIGIN      
        1 cgagcgcaag cggctcgagc cgcacgccgt ttccttcgag ctcgatgggc cgtaaagaga
       61 tcatcgcagc gcggcaagtg cgccgaggag tcttacggga cgatcgggct cgtgcggtcg
      121 atgctcgagc gctcgccgcc aaccatgagc tcgacggcgt aattcgcttg ctgacaggag
      181 tactcgaaga gctcgacgcc gcgatcgaac ccgagatcga agccgccctt ccacggcgcc
      241 gtgtaggcgc cgggatcgtc gactgtgatc tcgtaagcga tcgtctcgga atccttgcgc
      301 gtgaagcgct cgatcgtgtg cagctgcgac gtgtgcggca tgccgcgccg atccatccaa
      361 aagctctcgt tgaaaccgac gctgtcgatg acgagcgtgt cgccgtccca ccagccgatc
      421 gagtggccgt agtagctcgg ctcgaggtcg cgcgggtgcg agcggccgtc catgtagacc
      481 gtgcgaaacg tgtgcgggcc gccgatatcg aagatgtaga gccgctcgag ctccggcatc
      541 tcgacgaact cgacgccgta cggcgtctgg aactgccgcg ccgtgccgct cgccttgcag
      601 cgcgtgtgcg gctcgagctc gtggatctgg cgcgcgtcgt agagcgcgcg cgcccatggt
      661 tgaaacggcg tttgatcggc cggattgatc gggtccgtga tgccgaacat cggcgtccac
      721 acgcccttct cgtccggcgt cgcgccccat aggatcgcgc gtccgtccgc gtcgcgcggc
      781 gcgggcccgg gcgggggcag gttcgcgtta cgggcgcggc gttgcgccgc ggcgggatcc
      841 gcgatcacga gcgccgccaa cgcgagagcg gatgcgagca cggtcagctt catgagtgcc
      901 tcgaaaagct agttgccctg acggctgctc gaatcggcgt cgagcgtctg gcccgggcgc
      961 ccgcccgtcg ccgtcaacgt gacggtgcgc gcgttcattc ggttatcgcc gttgcgcgcc
     1021 atgaaaccgt cgacggtcac ggactcgccg atcttcagcg tctcgcgacg ccagccgctg
     1081 cgctgcaacc cgtgcggcgg ccccatctcg gcgccccagt tcgtgaccgc gccggtcgcc
     1141 tcgtccttca cgttgatgta gaaccagacg tgcgggttcg tccactcgac cttcgtgacg
     1201 atgcccgtga gcttgatggg tttgtccgca tcgaactcgg ccgagaacga gtggtgtgcg
     1261 agcgccgcgc cactgacgag cgagcccgcc aagatcaccg cggccattct acgaatgttc
     1321 atgttgcgtt cctctaagaa cgattgtcct gacagaaata aacgggcaga tcctctccac
     1381 ccacccactt gagctcccag ccgctcgacc atggctgcgt gtaggcgccg ggatccgtga
     1441 tcgtgacttc gtaacgcagc gtgtcgaacg tcggccgcgt gaagcgctct acgagcgaca
     1501 actggtccgt gtgcggcaga ccgccgttcg tgaaccaaaa gtcctcgttg aagccggtcg
     1561 tctcgacgac gaacgtgtcg ccttcccagt gcgcgacggc gcggccgtag tagagcgggt
     1621 tgtcatcgtc gccttggacc tggcccgtcg ggctacggcc gtccatgtaa atgatccgga
     1681 agttgcgatt gccgctgccg atgagcacga acatgcgctt gcgcgcgtgg tcctcgacga
     1741 actgcacgcc gtacggcgac tggaactgcc gcactccacc ggggttcttg cagttcagga
     1801 agccgggatc gtcggcgaga tgacgctgct gacggtgctg atacagaccg agcgcccagg
     1861 gctggaacgg cgccacgcgc ggcgcgtccg agatccgcgc gagcacccca tcggcgttca
     1921 tcgcgacgtt ggcgccagcc tgctggagca cggtgctcga agggtacgcc caatagccgc
     1981 cggagccgtc cacgactccg agcaacggtt tgccgtcgct gccgcgcggg gtgggccgcg
     2041 gggactgcgg ggcctcgggg cccgtatcgg tgacgttgta gacctgccgc tgcgtcgcgg
     2101 aagcgaccac gtgctcgccc cacacctgcc gcgagccgtc gcgtgccgcc gggccgctga
     2161 cctcgatcgc gtcgccgggc ttcagcgtgt cgtgctgcca gccactgcgt ctgagcagca
     2221 ccgtgctctc gagctcgacg gcccagttct cgacgacgcc accgtcccgc gtcacgttca
     2281 cgaacacgtg cacgtgagga ttacgccaat cgacgttcgt cacgaggccg cgcaggtcga
     2341 gctgcttcgt ttcatcgaac ttcgccgtca gtggatgatg cgccgccgcc agcgacgcgc
     2401 agagcgcgac accgagaccg atgccgattc gcaagctcgt gcgactcatt gcctgctcgc
     2461 cgtgaacgcg ccacggcctt tgttgctgga ccacgtaccg ttgatcgagc ggttcgggag
     2521 ctcgagattc tcgagcttgc cttcgatcac gtagcgcacc gcgctaccgt ctttgtcctt
     2581 gccttcggct tcgagcctga cgacccagcc gctcggctcg agcgacgcgc tcgtgagcgg
     2641 catgttgtcg gtgccggggt tgatcatgcc cgtgatcgct ttgccgtccc aatcgaggat
     2701 caacaggatg ttgtcgccgt ggaccgagtt gccggcccac tcgccgagcc aggagccctt
     2761 cagggggtga ccttcctgcg ctgccgtggt gccgagtaag cccaatgcca agaacgccgc
     2821 ggcggccgcc gtcatgagtc ttttcgtcat tctgttgtct cgatccgaaa gccgggaaat
     2881 catacgcacc gtttcagagt gccagcttga agaattgtgt ggtgtccaaa ctacccgcaa
     2941 ctgaccaacc caacggccat cggcacgctc tcgacgcggt cttcgcagcc cggccggacg
     3001 tcgcccggcg ccacgaccga cacgctgcgg cactcgcggc gcacgacagt gccgctctcg
     3061 tggccatttg cgagcacggt gctcgccgcg gggcacacgg cccgcacgcg atcggcacaa
     3121 tcgaactcgg gcttcggcgc acacgcgaag aagaacacgg gccgcccgtc ggcctgccga
     3181 taaccccaaa agacgagctc gctgcccacg cgaccgttct ctgcggtcgc ggtcgcgccg
     3241 gcaagcgcgg gcatgatctc ggccacaggc cgcgtgaaca cagactcggg gccctgagtc
     3301 acgttcatct gccgcggcgg aggcgcgctc tggccgaaag cgccgagcgc gccgaccaga
     3361 ccgagcccga ggaccgtcgc gtgcaccttg ttcatgacaa gagcctatgc tcggggccgg
     3421 gcgccccgca agcgagcgcc cagcgcttca ataaccgagc cgcaccgtgc ccttcgccat
     3481 gccttccaca gtgccgacag tgagccattc gagcgaggcg cggaacagca gcagatggtt
     3541 cgattcccac atcgcgttat gtgaggcgca acccaagtcc agcagcactt tgttgtcggc
     3601 gccgagatcc gcgaagtact cctggacgcg ctccggcacg acttgcttat cgtgcgcgcc
     3661 cgcgaccatc agcgtcggcg tctgcatgcg ttcgacggcc gcgcggccga aaccccacac
     3721 ggtcgtattc ggcgcccgcc gcacaccttg gccccagctc gcaccgacgg gatcggacgc
     3781 gagcatgtcc gcccaaaccg cgtcggcaac ctccggctcg tattggttcg gacaaccgac
     3841 ctgtcgctcc caattcgccg tgaagtcggc gcgcgactgt gcgttgaagg cgacgccgac
     3901 cgccgggctc ggctgcgacg gcgtttgcgg cgcgtcgcgc ctataaccgg gggccagcaa
     3961 cacgagcttc gcgaccttgt cgggattgcg ggacgcatag ccgccggcac gcggcccgcc
     4021 cagcgaccaa gcaacgaggc tcacgcgcgg cacgtc
//
LOCUS       DATCUD010000301         2230 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102306, whole genome shotgun sequence.
ACCESSION   DATCUD010000301 DATCUD010000000
VERSION     DATCUD010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102306"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(137..2212)
                     /gene="ppk1"
                     /locus_tag="VIQ99_04405"
     CDS             complement(137..2212)
                     /gene="ppk1"
                     /locus_tag="VIQ99_04405"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011813031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEY9182417.1"
                     /translation="MDALNLKLPDYYINRELSQLAFNVRVLKQAMDTSVPLLERLKFL
                     CISSTNLDEFFEIRVSGLKHRLAVNAAPAGPDNLSSADVLRTVAEQTSSLVTEQYRVL
                     NDELIPKLREAGIRFVKRDDWSPAQRLWLQQYFRTEIVPLLSPTTLDPTRPFPRILNK
                     SLNFIVSLDGRDAFGRPCHRAIVQAPRSLPRLILLPHTLEGTGKTDFVFLSSVIHAFV
                     DQLFAGMEIGGCYQFRVTRNSDLLIDDEDVDDLMTALEGELLESRYGAATRLETAHDC
                     PEELAAYLLEHFRLTRADLYQVPGPVNLNRLLAVYDLVDRPELKYPPFTPGVPKLLVK
                     ANIFEAMSKQDILLHHPFESFAPVIDFVYRAATDPDVLAIKQTLYRTTPDSPLVESLV
                     SAAKAGKEVTVLIELRARFDEAANIELASKLQEAGAHVVYGVVGFKTHCKMTLVVRRE
                     GAKLKRYVHLGTGNYHPRTARAYTDYGLLSANEALGEDIHQVFMQLTSLMRTPDLNLL
                     SQSPFNLHERLLGYIRRETRHASNGGTGHIIAKLNALVEPEVIRALYEASNAGVYVDL
                     IVRGICCLRPGIPGVSENIRVRSIVGRFLEHSRVYYFHNNGDEELFCASADWMERNFF
                     RRIEIMFPILDPGLKARVMSDLDTYLADNDQAWELHNDGRYERLRPQADRDATPAQAK
                     LLRQLAEAS"
BASE COUNT          433 a          647 c          716 g          434 t
ORIGIN      
        1 gggaagattc gttggaagtg cgtttcccgc cggaatggct cgacgacaat ccgctgaccg
       61 tggccgatct cgagcaagaa aagcagtggc tcggggcacg tggcttcgag ttgcgaacga
      121 agggtcgcga gcgcggttag gacgcttcgg cgagttgccg cagaagcttg gcttgcgccg
      181 gagtcgcgtc gcgatccgcc tgcggccgca gccgctcata gcgcccgtcg ttatggagct
      241 cccacgcttg gtcgttgtcg gcaagataag tgtcgagatc ggacatgacg cgggctttga
      301 gcccgggatc gagtatcggg aacatgatct cgatgcgccg gaagaagttc cgctccatcc
      361 aatcggcgct cgcacagaac aactcttcgt cgccattgtt gtggaagtag tagacgcggc
      421 tatgctcgag aaagcggccg acgatcgagc gcacacggat gttctccgag acgcccggaa
      481 tgccgggccg caggcagcaa atcccgcgaa cgatcagatc cacgtagaca ccggcattcg
      541 acgcttcgta gagcgcgcgt atcacttccg gttcgaccaa cgcgttgagc ttggcgatga
      601 tgtggccggt tccgccattg ctcgcatgcc gcgtttcccg ccgaatgtag cccagcagcc
      661 tttcgtgcag attgaacggc gactgcgaca gcagattcag gtccggcgtg cgcatcaggc
      721 tcgtgagctg catgaacacc tgatggatgt cctcgccgag ggcctcgttg gccgacagga
      781 ggccatagtc ggtgtaggcg cgcgcggttc gaggatgata attgcccgtg cccaagtgaa
      841 cgtagcgctt cagcttggcg ccctcccgtc gcacgacgag ggtcatcttg cagtgggtct
      901 tgaaaccgac gacgccgtat acgacgtggg cgccggcctc ctgaagcttg ctcgcgagct
      961 cgatattggc cgcttcgtcg aaacgcgcgc gcagctcgat cagcaccgtg acttccttgc
     1021 cggctttcgc ggcggagacg agactctcga cgagtggcga gtccggtgtc gtccggtaga
     1081 gcgtttgttt gatcgcgagc acgtcgggat ccgtcgcggc gcgatacacg aagtcgatga
     1141 ccggggcgaa cgattcgaac gggtggtgca gcaggatgtc ctgtttcgac attgcctcga
     1201 agatgttcgc tttcaccagc agcttcggca cgccgggcgt gaacggcgga tacttcagct
     1261 cgggtctatc gaccaggtcg tacacggcca gcagcctgtt cagattcacg ggtccgggga
     1321 cctgatagag gtctgcccgc gtcagcctga agtgttcgag caaataagcg gcgagctctt
     1381 ccgggcaatc gtgcgcggtt tcgagacgtg tcgcagcgcc gtatcggctt tcgagtagct
     1441 caccctcgag cgccgtcatg aggtcgtcca cgtcttcgtc atcgatcaag aggtcgctgt
     1501 tgcgcgtgac gcggaactgg tagcaaccgc cgatctccat gcccgcaaag agctggtcaa
     1561 cgaacgcgtg gatcaccgac gacaagaaaa cgaaatccgt cttgccagtg ccttcgagcg
     1621 tatgcggtaa caagatcagc cgcggcaacg agcgcggggc ttgcacgatt gcgcggtggc
     1681 aaggacggcc gaacgcatcg cggccgtcga gactgacgat gaaattcagg cttttgttca
     1741 ggattcgcgg aaacggccgt gtcgggtcga gcgtggtcgg gctcaagagc ggcacgatct
     1801 cggtgcggaa gtactgttgg agccagagtc gttgggctgg cgaccagtcg tctcgcttca
     1861 cgaaacggat accagcctct cgcagcttcg gaatcagctc gtcgttgagg acgcgatact
     1921 gctccgtcac gagcgagctc gtctgttccg ctaccgtgcg caggacatcc gccgagctca
     1981 agttgtcggg gcctgccggc gctgcgttca cagcaagccg atgcttcaat cctgagactc
     2041 ggatctcgaa aaactcatcc agattcgtcg acgaaatgca gagaaacttc agacgttcga
     2101 gcaacgggac gctcgtgtcc atcgcctgct tcagcacgcg aacgttgaac gccaactgcg
     2161 acagctcgcg gttgatgtag taatcgggaa gctttaggtt cagcgcatcc acggcggggg
     2221 tcagcgcgaa
//
LOCUS       DATCUD010000302         2119 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3145, whole genome shotgun sequence.
ACCESSION   DATCUD010000302 DATCUD010000000
VERSION     DATCUD010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2119
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3145"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1248
                     /locus_tag="VIQ99_04410"
     CDS             124..1248
                     /locus_tag="VIQ99_04410"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182418.1"
                     /translation="MPKQVVKQVLPTTMVGSYPRPSWFTKQLLGRDVRVAFKEVSHEE
                     AYHDAVATVIRDQIDCGLDIVTDGNMWYDDYVGVIGSFCWYLYERIPGFEPTRNPHPS
                     MVNAGPSAGKTFLDDWGGVINNGPVDKAPDALRWPDLYDIAKKAAGDVPVKVSIGAGP
                     ANLAWHVYFNNQSYYKSPKELTFALCPIFNKEMKELVKHGAKYLQIEDLGAWLPLFTN
                     NKDDYKWIRESIEMMCDGVDAKIGWHFCFGNAWGNDILSANFPQGYQTVLPYFWNTEG
                     VDEFVLDYANRHMAGVEFLKNCPKNKGVQVGVLDIRTSMVETPDMIADRIRTTLKALS
                     PEQVTLSTDCGMKPLARMVSKIKLSALAEGAAIVRKEIKA"
     gene            complement(1363..>2119)
                     /locus_tag="VIQ99_04415"
     CDS             complement(1363..>2119)
                     /locus_tag="VIQ99_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182419.1"
                     /translation="SVRAGALGRALVLGLDREAALLSDEVDAELDREQRVFAEALRRG
                     APATTTLALATTIAHNLGDLSRVVDAWPAPAAASAMRARYSRLGHADGPRHRADFLLA
                     GALNKELMAIENHRFLALRKPRGLRRGRALLLPIGPWFDTWGETVARSDLIEDTDRAE
                     VVAALIELHLRSPTQEGCLRALAAIHRETRGGLGWYGAALPARLRKEIGRGRIREAID
                     VSRERFEARIEGRYRALLARFGVPSRGGWRASA"
BASE COUNT          400 a          723 c          672 g          324 t
ORIGIN      
        1 ggcccgtcga ggccgccaag acgctgccaa accacacggt gcgctgctat ccgggcggga
       61 attcgatggc ttatactcca gccccttcat cacgatctgg cgctgattca gtaggagaac
      121 aaaatgccaa agcaagtcgt aaaacaagtg ctcccgacaa cgatggtcgg gtcgtatccc
      181 cggccgagtt ggttcacgaa acagctgctg ggccgcgacg ttcgcgtcgc gttcaaagag
      241 gtctcgcacg aggaggccta ccatgatgcc gtcgccaccg tgatccggga tcagatcgac
      301 tgcggcctcg acatcgtgac cgacggcaac atgtggtacg acgattacgt cggcgtgatc
      361 ggctcattct gctggtacct ctacgagcgc atccccggct tcgagcccac gcgcaatccg
      421 cacccgtcga tggtcaacgc aggcccgagc gcaggcaaga cgttcctcga cgactggggc
      481 ggcgtcatca acaacggtcc cgtcgacaag gcgcccgacg cgctgcgctg gcccgacctg
      541 tacgacatcg cgaagaaggc cgccggcgac gtcccggtca aggtgtcgat cggcgcgggc
      601 cccgcgaacc tcgcgtggca cgtctacttc aacaatcagt cgtactacaa gagcccgaag
      661 gagctgacct tcgcgctctg ccccatcttc aacaaggaga tgaaggagct cgtcaagcac
      721 ggcgcgaagt acctccagat cgaggatctc ggcgcctggt tgccgttgtt cacgaacaac
      781 aaggacgact acaagtggat tcgtgaaagc atcgagatga tgtgcgacgg tgtcgacgcg
      841 aagatcggct ggcacttctg cttcggcaat gcctggggca acgacatcct ctccgcgaac
      901 ttcccgcagg gctaccagac cgtgctgccg tacttctgga acaccgaggg cgtcgacgag
      961 ttcgtgctcg actacgcgaa ccggcacatg gccggcgtgg aattcctgaa gaactgcccg
     1021 aagaacaagg gcgtgcaggt cggcgtgctg gacattcgca cgagcatggt cgagacgccg
     1081 gacatgatcg ccgaccgcat ccgcacgacg ttgaaggcgc tatcgccgga gcaggtcacg
     1141 ctgtccacgg actgcggcat gaagccgctc gcgcggatgg tgtcgaagat caagctcagt
     1201 gcgctggccg agggtgccgc gatcgtccgc aaggagatca aggcttaagc ccccgcgtcg
     1261 cttcgcgact cgaacgaacg ggccggccca aagccggccc gtttcatttg gcggccatgg
     1321 atggccgaca tgccgcaaac gcaggagcat tttgcggcgg cctcaggcgc tggcccgcca
     1381 tccaccgcgc gaaggaacgc cgaaccgcgc cagcaacgcg cggtatcgac cctcgatacg
     1441 cgcctcgaaa cgctcccgcg agacgtcgat tgcctcgcgg atgcgccccc gcccgatctc
     1501 cttgcgaagc ctcgcgggca gcgctgcgcc gtaccatccg aggcccccgc gcgtctcgcg
     1561 gtggatcgcg gccagcgcgc gcaagcaccc ttcctgagtc ggcgaacgaa ggtgcagctc
     1621 gatcaaggct gcgacgacct cggcccggtc cgtgtcctcg atcagatcgc tacgggccac
     1681 cgtctctccc caggtgtcga accacgggcc gatcggcagc agcaatgcgc ggccgcggcg
     1741 tagcccgcgc ggcttgcgga gcgcgaggaa ccggtggttc tcgatcgcca tgagctcctt
     1801 gttcaaggcc cccgcgagca ggaaatcggc gcgatgtcgc gggccatccg catgaccgag
     1861 ccgcgagtag cgcgcgcgca tggcgctcgc ggccgccgga gccggccacg cgtcgacgac
     1921 gcgcgacaag tcgccgaggt tgtgcgcgat cgtcgtcgcg agtgccagcg tcgtcgtggc
     1981 cggcgcaccg cgccttaggg cttcggcaaa gacccgctgc tcacgatcga gctccgcgtc
     2041 gacttcgtcc gagagcagcg ccgcttcgcg gtccaacccg agcaccagcg cccggcccag
     2101 cgcgccggcc cgcaccgag
//
LOCUS       DATCUD010000303         2345 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88234, whole genome shotgun sequence.
ACCESSION   DATCUD010000303 DATCUD010000000
VERSION     DATCUD010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2345
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88234"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..626)
                     /locus_tag="VIQ99_04420"
     CDS             complement(270..626)
                     /locus_tag="VIQ99_04420"
                     /inference="COORDINATES: protein motif:HMM:TIGR04433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UrcA family protein"
                     /protein_id="HEY9182420.1"
                     /translation="MTTAKWILCLAASAATSLTSLSSGAVEPAADNPTRTVRAWDLDL
                     TRPTDVQTLYTRVQNAAAAICKREARNHYRNTRRFVSTEWTESCIARAVDDAVRDADA
                     PLLAALHVRMSVAQRD"
     gene            complement(904..1569)
                     /locus_tag="VIQ99_04425"
     CDS             complement(904..1569)
                     /locus_tag="VIQ99_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182421.1"
                     /translation="MRIMLIASAVAGLSLLGVGSAQAPAARALPPDVHPVSLSRLPPL
                     TRADLDDEGKAIYDRIVGDGPAPRTGPVALSLYSPKIAQAFSDLNGFLRYNGDLSPRH
                     TEVAILVATWEIEQQYEYSAHEPAVLRYGAPQAVVDTIKYDREPVGLSPEETLIIKFG
                     RAIMRDHKVDSELYAEVVKTFGRKGMVEMVTVMGDYVMVGMVMTAIDQQVPAERAELL
                     PPR"
     gene            complement(1601..>2345)
                     /locus_tag="VIQ99_04430"
     CDS             complement(1601..>2345)
                     /locus_tag="VIQ99_04430"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182422.1"
                     /translation="RNGPAAPAIPREQTIQAVQNAKTAGYDYLKVVLVATPNGPELDT
                     LKLIVEEGKKVGMPTIVHAVSVLDTLTAIEARPDVLVHTPHIGSLDADPYAIRKIVEA
                     GIPMTSTLAVFGPHFGPDNTPLFRDGQPFPWHTLSSAGQGPVNARLLWNAGIRYGYGT
                     DTQWPPKESLLDELRELEVVFSPTDIVTIITKNAAIAALHGDEIGTLEPGKLGDVVIV
                     DGDPLADTRALLRVTTTIKAGAVVFQSQR"
BASE COUNT          373 a          750 c          778 g          444 t
ORIGIN      
        1 gccccgatgg acccgcgccg acaatcgcga cctgggtgcg cacgtcagcc cgtcgcgccg
       61 caacttgaag acgatcgtcg caagatattc tgccggccgt cagtgcatgt gtgcatttgg
      121 agcgtccccc gttgggggtc agattcgcgc cgcaagcgct cgcagtacat ggaggaagcc
      181 gtcccagact tggacttttc tgacgcgtcg gcgtgcggac acccttcctt gggtctccgc
      241 acgccgaccg tcctcgagaa acgtcgtgct cagtcgcgtt gcgccacgct catccggacg
      301 tgcagcgctg cgagcagcgg agcgtccgca tcgcgcacgg cgtcatccac cgcgcgggct
      361 atgcagctct ccgtccattc tgtcgacacg aaccttcgtg tgttcctgta gtggttgcgc
      421 gcttcacgct tgcagatcgc ggctgcggcg ttctgcacgc gcgtgtacag cgtttgcaca
      481 tccgtcggcc gcgtcaggtc gagatcccac gcgcgcaccg tccgcgtggg gttgtcggcg
      541 gcgggctcca ccgcgccgct cgacaatgaa gtcagggaag tcgccgcgct ggcggccaag
      601 cacaaaatcc atttcgcagt tgtcattgca gcatcctcgt gtgattgacg tggagaaaga
      661 cgcgtcgacg tcgtttcaag ttacatgcca acgagcgctg cgaacggact cgtagccaaa
      721 acaggtcgtt accgtttcgg ggatggttag cgatcgttca tctgtagcgg tagcggacga
      781 cgcgggtccc gttcgtggga cggggtgcac ggcgagtgcg cgtcgcgcgg gggctcgcgc
      841 gcgtgcgtgg ctcgtgccct tcggcacgac ccagcttcac gacagcggcg gcagaggccg
      901 cgtttagcgc ggtggcaaca actcggcgcg ttcggcgggt acctgttggt cgatcgcggt
      961 catgaccatg ccgaccatca cgtagtcgcc catgaccgtg accatctcga ccatgccttt
     1021 gcgaccgaaa gtcttcacga cctcggcgta cagctccgag tcgaccttgt ggtcgcgcat
     1081 gatcgcgcgg ccgaacttga tgatcagcgt ttcctcgggg ctcaggccga cgggctcgcg
     1141 gtcgtacttg atcgtgtcga ccacggcttg aggtgcgccg tagcgcagca ccgcgggctc
     1201 gtgcgccgag tattcgtact gctgctcgat ctcccacgtc gcgacgagaa tcgcgacctc
     1261 ggtgtggcgc gggctcaagt cgccgttgta acgcaggaag ccgttcaagt cgctgaacgc
     1321 ctgcgcgatc ttcgggctgt acagcgacaa agcgaccggc ccggtcctcg gcgccggccc
     1381 gtcgccgacg atgcggtcgt agatggcctt gccctcgtca tcgagatcgg cgcgcgtgag
     1441 cggcggtagt cgagacaacg aaacggggtg gacgtcagga ggtaacgccc gtgcagccgg
     1501 cgcctgcgcc gaccctacac cgaggagcga aagtcccgcg accgcggaag cgatgagcat
     1561 gatgcgcatg agtggatcct tcttgttggt cgttgcgatg tcagcgctgc gattgaaaca
     1621 cgacggcgcc ggccttgatc gtggtcgtga cgcgcaacag cgcgcgcgtg tcggcgagcg
     1681 gatcgccgtc gacgatcacg acgtcgccga gcttgcctgg ttcgagtgtg ccgatctcgt
     1741 cgccgtgcag cgctgctatc gccgcgttct tcgtgatgat ggtgacgata tcggtcggcg
     1801 agaatacgac ctcgagctcg cgcagctcgt cgagcagcga ctccttcggg ggccactgcg
     1861 tgtcggtgcc gtagccgtat cgaatcccgg cattccacag cagccgcgcg ttgacgggac
     1921 cctggcccgc gctagacagc gtgtgccacg gaaatggctg cccgtcgcga aacaacggtg
     1981 tgttgtcggg cccgaaatgc gggccgaaca ccgcgagcgt cgacgtcatc ggaatcccgg
     2041 cctcgacgat cttccggatc gcgtacggat ccgcgtcgag gctgccgatg tgcggcgtgt
     2101 gcacgagcac gtcgggccgc gcttcgattg cggtcaaggt atcgagcacg ctgacggcgt
     2161 gcacgatcgt cggcatgccg accttcttgc cttcctcgac gatcagcttc agcgtgtcga
     2221 gctcggggcc gttcggcgtc gcgacgagca cgaccttcaa atagtcgtaa cccgcggtct
     2281 tcgcgttctg cacggcttga atcgtttgct cgcgcgggat cgccggagcg gccggaccgt
     2341 tgcgc
//
LOCUS       DATCUD010000304         1981 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3170, whole genome shotgun sequence.
ACCESSION   DATCUD010000304 DATCUD010000000
VERSION     DATCUD010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1981)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1981)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1981
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3170"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..>1981
                     /locus_tag="VIQ99_04435"
     CDS             173..>1981
                     /locus_tag="VIQ99_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY9182423.1"
                     /translation="MRTIPRPFTVSCLATLLAACGSGGGDPSATTTSTVAIDDNDIGG
                     TVNGPAGPEAGVWVIAETQDFDTRYAKIVVTDDQGRYVVPDLPPANYQVWVRGYGLVD
                     STKVAGRPGQTLDLVANAAPSPAAAAVVYPAAYWYSMMKVPAAEEVASLPGGVTQYLA
                     SVKNLSCIGCHQIGQLATRTIPDAFADMSHHDAWVRRIQSGQAGAQMLASAMNQLGGV
                     PPKYLADWTERVAAGELPHATPERPRGVERNIVATVRDWSSPQFYMHDLSGTDRRDPT
                     VNGYGKLYGAPELSTDEFPILDPQTNTATVLHAPVQDPSTPTTNSTPPTQPSPYWGNE
                     AIWDSKANAHNPMLDENGLVWYTAVVRAPTNAPEYCRAESGHPSAKLFPLERSGRQLS
                     VYDPKTEKYTFIDTCYSTHHLQFAEDANDTLWTSGGGPVVGWLNSKMFLETGDAGRSQ
                     GWTALVLDTNGNGKRDDYVEPGQPADPAKDTRVNSGFYAVMPNPADGSIWGSTIGYPG
                     AVVRLDPGPNPPETALAEVYTPPMPGYGIRGADIDRNGVVWMSMGSGHLGSFDRRKCK
                     GPLNGPTATGNHCPEGWSFYRYPGPGFVGRPDESVES"
BASE COUNT          352 a          684 c          645 g          300 t
ORIGIN      
        1 cgccggccgc gagacgaggg catggatgcc cgcggtggag caatgcagag agcaattgcc
       61 gagcagttga aggatccccg ccagccacgg gcttgcataa cccacgcggg agtggatagt
      121 gggcgttcga ctgccgcgca aggcggatcc ttattgcttg gggggaacta gcatgcggac
      181 catcccacga ccgttcaccg tctcgtgcct cgcaacgttg ctggccgcct gcggctctgg
      241 cggcggcgac ccaagcgcca ccacgacttc aactgttgcc atcgatgaca acgacatcgg
      301 cggcaccgtc aacggcccgg ccggcccgga agccggcgtc tgggtcatcg ccgagacaca
      361 agatttcgac acgcgctacg cgaagatcgt cgtcaccgac gaccaaggcc gctacgtcgt
      421 gcccgacctg ccgcccgcga actaccaggt ctgggtccgc ggctacggcc tcgtcgattc
      481 gacgaaggtt gccggccgtc ccgggcagac gctggatctt gtcgcgaacg ctgcaccgtc
      541 gccggccgcg gccgcggtcg tctatccggc cgcgtactgg tactcgatga tgaaggtgcc
      601 ggccgcggag gaagtcgcct cgctgccggg cggcgtcact cagtatctcg cgtcggtcaa
      661 gaatctgtcg tgcatcggct gccaccagat cggccagctc gcgacgcgca cgattccgga
      721 cgcgttcgcg gacatgagtc atcacgacgc ctgggtgcgg cgcattcaat cgggtcaggc
      781 cggagcacag atgctggcct cggcgatgaa tcagctcggc ggcgtgccgc cgaagtatct
      841 cgcggactgg accgaacgcg tggcggccgg cgagctgccg cacgcaactc cggagcgtcc
      901 gcgcggcgtc gagcgcaaca tcgtcgcgac cgtccgcgat tggtcgagcc ctcagttcta
      961 catgcacgac ttgagcggca cggaccgccg tgatccgacc gtcaatggtt acggcaagct
     1021 gtacggagcc cccgagctct cgaccgacga gttcccgatc ctcgatccgc agacgaacac
     1081 ggcaaccgta ttgcacgcgc ccgtgcagga cccgagcacg ccgacgacga acagcacgcc
     1141 gccgacgcag ccgtcgccgt actggggcaa cgaagcgatc tgggacagca aggcgaacgc
     1201 gcacaatccg atgctcgacg agaacggcct cgtctggtac acggccgtcg tgcgcgcgcc
     1261 gacgaacgca ccggagtatt gccgcgccga atcgggtcac ccgtcggcca agctgttccc
     1321 cctcgagcgc tcgggtcgcc aactctccgt ctacgatccg aagaccgaga agtacacgtt
     1381 catcgacacg tgctactcga cgcaccacct gcagtttgcg gaggacgcga acgacacgct
     1441 gtggaccagc ggcggcggtc ccgtcgtcgg ctggctgaac tcgaagatgt ttttggaaac
     1501 cggcgacgcg ggacgctcgc aaggctggac cgcgctcgtg ctcgacacga acggcaacgg
     1561 caagcgcgac gactacgtcg agccgggcca gcccgccgat cccgccaagg acacgcgcgt
     1621 caacagcggt ttctatgccg tgatgccgaa tcccgccgac ggctcgatct ggggctcgac
     1681 gatcggctat cccggcgctg tcgtgcgcct cgatcccggc ccgaatccgc cggagacggc
     1741 gctcgccgag gtctacacgc cgccgatgcc ggggtacggg attcgcggcg ccgacatcga
     1801 tcgcaacggc gtggtctgga tgtcgatggg cagcggccac ctcggctcgt tcgatcgccg
     1861 caagtgcaag ggcccattga acggcccgac ggcaaccggc aaccactgcc ccgagggttg
     1921 gagcttttat cgttatcccg gccccggctt cgtcggccgt cctgacgaga gcgtcgagtc
     1981 g
//
LOCUS       DATCUD010000305         2352 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45561, whole genome shotgun sequence.
ACCESSION   DATCUD010000305 DATCUD010000000
VERSION     DATCUD010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2352)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2352)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2352
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45561"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..118
                     /locus_tag="VIQ99_04440"
     CDS             <1..118
                     /locus_tag="VIQ99_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011219964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEY9182424.1"
                     /translation="IQMKVELISPIAMEEGLRFAIREGGRTVGAGVVAKIIQ"
     gene            141..452
                     /gene="rpsJ"
                     /locus_tag="VIQ99_04445"
     CDS             141..452
                     /gene="rpsJ"
                     /locus_tag="VIQ99_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEY9182425.1"
                     /translation="MANQNIRIRLKAFDHRLIDKSAREIVETAKRTGATVKGPVPLPT
                     KIERYTILISPHADKDARDQYELLTHKRLMDIVDPTDKTVDALMKLELPAGVDVQIKL
                     N"
     gene            671..1321
                     /gene="rplC"
                     /locus_tag="VIQ99_04450"
     CDS             671..1321
                     /gene="rplC"
                     /locus_tag="VIQ99_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005350169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEY9182426.1"
                     /translation="MSVGLVGRKCGMTRIFRENGDSVPVTVIEALPNRVTTVKTVERD
                     GYSAVQVTVGTAPKANRTTKAEAGHFAHAKVDAGRGLYEFRLEQGEGEKLAPGTELKV
                     DLFKVGQFVDVSGTTKGKGYTGVIKRHNFSHQYMTHGNSLSHRAPGAIGQRQTPGRVF
                     PGKRMAGHLGNDKVTKINLEVVKIDAERNLLLVKGAVPGSENGQLVVRPAIKAAAK"
     gene            1342..1947
                     /gene="rplD"
                     /locus_tag="VIQ99_04455"
     CDS             1342..1947
                     /gene="rplD"
                     /locus_tag="VIQ99_04455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017395329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEY9182427.1"
                     /translation="MKVKVQGSNSTLELADATFGVAFNEPLVHQVVTAHLAGARAGTK
                     AQKNRSDVSGSGKKPWKQKGTGRARVGSIRSPIWVGGGRTFAARPRNFEQKVNRKMYR
                     GAMRSVLSELLRQDRLLVTPELAQSEPKTKELKSKLDKLGFTAGLIVVEAFDMKLWLA
                     ARNLPNVTVLEAQLIDPVSLVGADKVVITAAALKIVEEKLK"
     gene            1944..2252
                     /gene="rplW"
                     /locus_tag="VIQ99_04460"
     CDS             1944..2252
                     /gene="rplW"
                     /locus_tag="VIQ99_04460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEY9182428.1"
                     /translation="MSNPAHREHLMQVLLGPHISEKATSVAESGSQVVFRVRSDATKT
                     DIRQAVELLFEVKVERVSVVRIPAKQKRFGQRAGARAAWKKAYVRLAPGQDINFMGAE
                     "
BASE COUNT          499 a          690 c          772 g          391 t
ORIGIN      
        1 cattcagatg aaggtggagc tgatttcgcc gatcgcgatg gaggaaggct taaggttcgc
       61 gattcgcgag ggcggccgca ccgtcggcgc cggcgtcgtc gccaagatca tccaataacg
      121 aacgaattcg agagaaaatc atggcgaatc agaacattag aatccggctg aaggcgttcg
      181 atcaccgttt gatcgacaaa tcggcccgcg agatcgtcga aacggccaag cgcacgggag
      241 ccaccgtcaa ggggccggtg ccgctgccga cgaagatcga gcggtacacg atcctgatct
      301 cgccgcatgc cgacaaggac gcgcgggatc agtacgagct cctgacccac aagcgcctca
      361 tggatatcgt tgatccgacg gacaaaacgg tcgacgcgtt gatgaagctc gagttgccgg
      421 cgggggtcga cgtccagatc aagctcaatt gagctcggcg ttgtactagg gatttgaggg
      481 tggttataat gccgggcttt tcagcagccc gggttgtttc tgccgggttg ttcagccgtc
      541 cgagttcctg gacggccgca aatttcgaca ccgcctgaac aggcggagtc atgggtgcca
      601 gggcgcgctt ggtcgcagcc ctggctgaag cgccggccga tgtagtcggc gcggatatag
      661 aggaagacaa atgtcagtcg gtttagtagg ccgaaaatgc ggcatgaccc gcattttccg
      721 ggaaaacggc gactccgttc cggtcaccgt catcgaagcg ctgccgaatc gcgtcacgac
      781 cgtgaagacg gtcgagcgtg atggctatag cgcggtccag gtcacggttg gtactgcccc
      841 aaaggccaac agaaccacga aggccgaagc cggccacttc gcgcacgcga aggtcgatgc
      901 gggtcgcggg ctctacgagt tccggctcga gcaaggcgag ggcgagaagc tcgctcccgg
      961 taccgagctc aaggtcgatc tcttcaaagt cggccagttc gtcgacgtca gcggcacgac
     1021 gaagggcaag ggctacacgg gcgtcatcaa gcgccataac ttctcgcacc aatacatgac
     1081 gcacggcaac tcgctgtcgc atcgcgcgcc gggcgccatc ggtcaacggc agacgccggg
     1141 ccgcgtgttt cccggcaaga ggatggccgg tcatctcggt aacgacaagg tcacgaagat
     1201 caatctcgag gtcgtcaaga tcgatgccga gcgcaatctc ctgctcgtga aaggcgcggt
     1261 gcccggcagc gagaacggcc agctcgtcgt tcgtccggcc atcaaagccg cggccaaata
     1321 acttcgacgc gagatcgagc gatgaaagtc aaagtccaag gtagcaatag cacgctcgag
     1381 ctcgcggatg cgacgttcgg tgtcgcgttc aacgagccgc tcgtgcatca agtcgtgacg
     1441 gcgcacttgg ccggcgcgcg tgccggcacg aaagcccaga agaatcgctc cgacgtgagc
     1501 ggtagcggca agaagccgtg gaagcagaag ggcacgggtc gtgcgcgcgt gggctcgatt
     1561 cgcagcccga tctgggtcgg cggtggcagg acctttgccg cgcggccgcg caacttcgag
     1621 cagaaggtca accgcaagat gtatcgcggc gcgatgcgct ccgtgctgtc ggagctgctg
     1681 cgccaagacc ggttgctcgt gactccggag ctcgcgcagt cggagccgaa gaccaaggag
     1741 ctcaagtcga agctcgacaa gctcggtttc acggccgggc tgatcgtcgt cgaagcgttc
     1801 gacatgaagc tctggcttgc cgcacggaac ctgccgaacg tcacggttct cgaggcacag
     1861 ctgatcgatc ccgtgagcct ggtcggcgcc gacaaggtcg ttatcacggc cgcggcactc
     1921 aagatcgtcg aggagaagct caaatgagca acccggccca ccgcgagcat ctgatgcagg
     1981 tcttgctcgg tccgcacatc tcggagaagg cgacgagcgt tgccgagagc ggcagtcagg
     2041 tcgtcttccg cgtgcgcagc gacgccacga agaccgatat ccggcaggca gtggagctgc
     2101 tgttcgaggt caaggtcgag cgcgtatccg tcgtacgcat cccggccaag caaaagcgct
     2161 tcggtcagcg cgccggcgct cgagctgcgt ggaagaaggc ctacgtgcga ctcgcgccgg
     2221 gccaagacat caacttcatg ggcgccgagt aggcaggcgc gcggggcagc atcgtggcgt
     2281 tacgtaagct aaaaccaact tccgcgggtc aacgattcgt cgttcgcgtc gtcaaggaag
     2341 gattgcacaa gg
//
LOCUS       DATCUD010000306         1587 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59665, whole genome shotgun sequence.
ACCESSION   DATCUD010000306 DATCUD010000000
VERSION     DATCUD010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59665"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1156)
                     /locus_tag="VIQ99_04465"
     CDS             complement(<1..1156)
                     /locus_tag="VIQ99_04465"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9182429.1"
                     /translation="MKGETVSHYRILDELGRGGMGVVYLAEDIRLGRRAALKFLPADT
                     SSDDQATQRFIQEARTASALDHPNVCTIYETGEAQDGRLFIAMAYYEGETLEQRLRRG
                     RLSVAEAIDVALQVARGLRKAHEAGIVHRDIKPANLFLTRDGIVKVLDFGIAKLGGLR
                     SLTRTGTTIGTSAYMSPEQIHGSEIDARTDLWSLGVVLYEMLVGECPFRGEQEIATIY
                     AVVSEPPPPLHARASDVPLPLETVVARLLKKDPRDRYASAAALVRDLDELAKHSADPN
                     EARLRAHETIVARVWRRRPPRFQIAVGLLLIAGATSYFGLDYARSDTPTLAILPFDTA
                     RAEAATRYVGDGLRDGLVTRLSQIQALKVKSRRTPLGADEDVKALGEALGV"
     gene            complement(1234..>1587)
                     /locus_tag="VIQ99_04470"
     CDS             complement(1234..>1587)
                     /locus_tag="VIQ99_04470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182430.1"
                     /translation="RGKYLFFPLINYVVMPRVGYRPECASFIDTAARLTEEIEILILE
                     VDGRRVENLEAHRQATGCFDVGALANPPIAGYPSAANGYYVMLEPLGSGTHELSFGGV
                     LPSMMQAVKYTLIVE"
BASE COUNT          267 a          509 c          529 g          282 t
ORIGIN      
        1 tcactccgag agcctcgccc agcgccttga cgtcctcgtc ggcgccgagc ggcgtgcgtc
       61 ggctcttcac cttgagcgct tggatttgcg acaaacgcgt cacgaggccg tcgcgcaggc
      121 cgtcgcccac gtatcgcgtg gcggcttcgg cgcgtgcggt atcgaatggc aggatcgcga
      181 gggtcggcgt atcggatcgc gcgtagtcga ggccgaagta gctcgtggcg cccgcgatca
      241 gcaggagacc gactgcgatc tggaaacgag gagggcgccg gcgccaaacg cgcgcgacga
      301 tcgtctcgtg tgctcgcaaa cgcgcctcgt tggggtccgc cgaatgtttc gcgagctcgt
      361 cgagatcgcg cacgagtgcg gcggccgaag cgtagcgatc gcgaggatct ttcttcagta
      421 atcgagcgac cacggtctcg agcggcagcg ggacgtcgga cgcgcgagcg tgcagcggcg
      481 gtggcggctc gctcacgacg gcgtagatcg tcgcgatctc ctgctcgcct cggaacgggc
      541 actcgccgac tagcatctcg tacagaacta cacctaacga ccaaagatcc gtgcgcgcgt
      601 cgatctccga gccatggatt tgctcgggcg acatgtacgc gctcgttccg atcgtcgtgc
      661 ccgtgcgcgt gagtgaccgc agtccgccga gcttcgcaat gccgaagtcg aggaccttca
      721 cgatcccatc gcgcgtgaga aacagattcg cgggcttgat gtcgcgatgc acgatgccgg
      781 cttcgtgcgc cttgcgcaga ccgcgcgcga cttgcaacgc gacgtcgatg gcttcggcca
      841 cgctcaggcg tccgcgccgc aggcgctgct cgagcgtttc gccttcgtag tacgccatcg
      901 cgatgaacag ccggccgtcc tgcgcttcgc cggtctcgta gatcgtgcaa acgttcgggt
      961 ggtccagcgc ggaggcggtg cgcgcctcct ggatgaagcg ttgcgtcgct tgatcgtcgc
     1021 tactggtgtc ggcgggcagg aatttcagcg cggcgcggcg gccgagcctg atgtcctcgg
     1081 ccaggtagac cacacccatc ccgccacgac cgagctcgtc gagaatccgg tagtgggaga
     1141 cggtttcgcc tttcacacgg cgcgctctct acacggcggc cacaacgtgc ggcaaccgta
     1201 ggtcagcggc ggagcactgt caacgtgtgg gcgtcactcg acgatcagcg tgtacttcac
     1261 ggcctgcatc atgctcggca gcacgccgcc gaagctcagt tcgtgagtgc ccgagcccag
     1321 cggctcgagc atcacgtagt agccgttcgc ggcggacgga tagccggcga tcggcggatt
     1381 cgcgagcgcg ccgacatcga agcaccccgt cgcctgacga tgcgcctcga ggttttcgac
     1441 gcggcgacca tcgacttcga ggatcaggat ctcgatttcc tcggtgagcc gagctgcggt
     1501 atcgatgaac gaagcgcact ccggtcgata acctactcgc ggcattacga cgtaattgat
     1561 gagtgggaag aacaggtact tgccgcg
//
LOCUS       DATCUD010000307         1691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67055, whole genome shotgun sequence.
ACCESSION   DATCUD010000307 DATCUD010000000
VERSION     DATCUD010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67055"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..>1691
                     /locus_tag="VIQ99_04475"
     CDS             69..>1691
                     /locus_tag="VIQ99_04475"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEY9182431.1"
                     /translation="MGYATAFAVAPTIDGDVIGDPAWEGGRPIDRFWQIQPSAGQSVS
                     QRTVVLVGFTDRALYIGMVAYDDEPLEIISTDSRRDASLDETDSFRVLIDGLLDRQNG
                     YVFGTNPAGLEYDGQVSREGQNQNFSGGEGGVNLNWDAPWTVRSAVSEIGWSAEMEIP
                     FTSLRFGSADVQTWGFNFERRIRRNNEIAFWAPLSQERNLTQVSEAGSIEGIRVPPQR
                     NLQLTPYVLAKTREGGTLPERESEDEWGFDLKYSITPSLTLDATYNTDFAQVEVDEQQ
                     VNLDRFSLFFPEKRQFFLENAGQFTVGNSQEVELFFSRRIGIASGLAVPIEGGARLSG
                     KIGQRTNVGILRMDSEAVDGLTSANEYSVARINQELPNRSSIGGLFVDRQGDGSLLGN
                     GPDDENQTYGLDGRWGIRDNGILQGWIGETSTPGRTGRDDAFSVSGEYSDADWTFGGG
                     YTEVGEDFNPEVGFLARRDFKKIEGRVFRRVRPVRGNFFEIRPHIIYRGYWDFEGFQE
                     TGFLHMDTHWELHSSREFHTGVNFTHEGLKQPF"
BASE COUNT          299 a          526 c          568 g          298 t
ORIGIN      
        1 tcgtgccgtt cgctctcgcc atccatccag cgttcgctca ggttccggcc accacggtcg
       61 agcgcccggt gggctatgcg actgcgttcg cggtcgcgcc gacgatcgac ggcgacgtca
      121 tcggcgaccc ggcatgggaa ggcgggcgcc cgatcgatcg cttctggcag atccagccat
      181 ccgcggggca gtcagttagc cagcgtaccg tggtgctggt cgggttcacg gatcgcgcgc
      241 tgtacatcgg catggtcgcg tacgacgacg agccgctcga gatcatctcc accgacagcc
      301 ggcgcgatgc ttcgctcgac gagacggaca gctttcgggt gctgatcgac gggttgctcg
      361 atcgccaaaa cggctacgtg ttcggcacga accccgcggg cctcgagtac gacgggcaag
      421 tctcgcgcga ggggcagaat cagaacttct ccggcggcga gggcggcgtg aacctgaact
      481 gggatgcacc ttggaccgtg cgctctgcgg tgtccgagat cggctggagc gccgagatgg
      541 agatcccgtt cacgtcgttg cgcttcggct ccgccgacgt gcagacatgg ggcttcaact
      601 tcgagcgccg gatccggcgc aacaacgaga tcgcgttttg ggcaccgctg tcgcaggagc
      661 gcaacttgac gcaggtgtcc gaggccggct cgatcgaggg cattcgcgtg ccgcctcagc
      721 gcaacctcca gctcactcct tacgtgctcg cgaagacgcg cgagggcggg acgctgccgg
      781 agcgcgaatc ggaagacgag tggggcttcg acttgaagta ctcgatcacg ccgagcttga
      841 cgctcgacgc gacctacaac acggatttcg cgcaggtcga ggtcgacgag cagcaggtga
      901 acctcgatcg cttttcgctg ttctttcccg agaaacgcca attcttcctc gagaacgcgg
      961 gccagttcac ggttggcaac tcgcaggagg tcgagctgtt tttcagccgg cgcatcggta
     1021 tcgcgagcgg tctcgccgtg ccgatcgagg gcggcgcacg tttatccggc aagatcggtc
     1081 aacgtacgaa cgtcggcatc ctgcgaatgg actcggaagc cgtcgacggg ctcacgtccg
     1141 cgaacgagta ctcggtcgcg cgcatcaatc aggagctgcc gaaccgatcg tcgatcggag
     1201 ggctgttcgt ggaccggcag ggcgacggct cgctgctcgg caatggcccc gatgacgaga
     1261 accagacgta tgggctcgac ggccgctggg gtatccgcga caacggcata cttcagggct
     1321 ggatcggaga gacgagcacg ccggggcgca ccggccgcga cgacgcgttc tcggtctcgg
     1381 gcgaatacag cgacgcggac tggacgttcg gcggcggcta cacggaggtc ggcgaggatt
     1441 tcaatcccga ggtcggcttt ctcgcgcggc gcgacttcaa gaagatcgag ggccgcgtgt
     1501 tccgccgcgt acgccccgtg cgcggaaact tcttcgagat tcggccgcac atcatctatc
     1561 gcggctattg ggacttcgag ggcttccaag agaccggctt cttgcacatg gacacgcatt
     1621 gggagctgca ttcgagccgc gagtttcaca ccggcgtgaa tttcacgcac gaagggctga
     1681 agcagccgtt c
//
LOCUS       DATCUD010000308         1545 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52792, whole genome shotgun sequence.
ACCESSION   DATCUD010000308 DATCUD010000000
VERSION     DATCUD010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1545
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52792"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..919
                     /locus_tag="VIQ99_04480"
     CDS             <1..919
                     /locus_tag="VIQ99_04480"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9182432.1"
                     /translation="GPDAGVTADQFAARHIGQETRLPSLELTTSMRGAQLAWRTPTQS
                     LPQEVNPRNVFYRLFGQGDDEAERKAIMHETGSILDRVLAQSASLQAKLGGQDRAAIG
                     VYLDSVREIERRVQMASQQDTSNLDIPEAPIGVPNDLDAHFALMFDLMALAFQADLTR
                     VITFSMDREASMRTYNNLSISEAFHPLSHHANDPAKQDRLAVIQTYHTKVFARFVDRM
                     AKTQEGDGSLLDHSMILYGSNMSDSNRHNNDPLPSAILGHAHGRIKGGRHVHYPQDSK
                     HSNLLLTLLERTEIPIESIGDSDGTLSEV"
     gene            922..>1545
                     /locus_tag="VIQ99_04485"
     CDS             922..>1545
                     /locus_tag="VIQ99_04485"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182433.1"
                     /translation="MTVRLVHARVAALAFALLGAAAVAAGQSLLEAAEAGNHDAALAA
                     LKAGGDVAARGPDGTTALIWAAYNGDAVLVAELVDAGAEVDAKNEFGASALSEAAIAG
                     YADVIAALLEGGADPNITNPEGETPLMAVARTGNVAAATLLLDAGADVNAIELWGQQS
                     ALMWAAAQKQPAMIRLLIARGADVDARGAVRNWERKVIKEPRPKDMNQ"
BASE COUNT          284 a          519 c          516 g          226 t
ORIGIN      
        1 cggccccgat gccggcgtga ccgcggacca gttcgcggcc cgccatatcg gccaagaaac
       61 gcggctgccg tcgctcgagc tcacgacctc gatgcgcggc gcgcagctcg catggcgcac
      121 gccgacacaa tcgctgccgc aggaggtgaa cccgcgcaac gtgttttatc ggctgttcgg
      181 ccaaggcgac gacgaagccg agcgcaaggc gatcatgcac gaaaccggca gcatcctgga
      241 tcgcgtcctg gcgcagtcgg cgagcctcca ggccaagctc ggcgggcaag atcgcgcggc
      301 gatcggcgtc tatctcgatt cagtccgcga gatcgagcgt cgcgtgcaga tggcatcgca
      361 gcaggacacc agcaacctcg acattcccga ggcgccgatc ggcgtgccga acgacctcga
      421 cgcgcatttc gcgctgatgt tcgacttgat ggcgctcgcc ttccaggccg atctcacgcg
      481 cgtgatcacg ttctcgatgg atcgtgaagc gagcatgcgc acgtacaaca acttgagcat
      541 ctcggaagcg ttccacccgc tctcgcatca cgcgaacgat cccgcgaagc aggaccggct
      601 cgccgtgatc cagacctatc acacgaaggt gttcgcgcgt ttcgtggatc gcatggcgaa
      661 gacacaggag ggcgacggct cgctgctcga tcactcgatg atcctgtacg gcagcaacat
      721 gagcgacagc aaccgccaca acaacgatcc tctgccgtcg gcgatcttgg gtcacgcgca
      781 cggccgcatc aagggcggcc gacatgtgca ttatccgcag gactcgaagc actcgaacct
      841 gctgctgacg ctgctcgagc gcaccgagat cccgatcgag tcgatcggcg acagcgacgg
      901 cacgttgtcg gaggtgtgag catgacggtc cggctcgtcc atgctcgcgt ggctgctctg
      961 gcattcgctt tgctgggcgc ggccgcggtg gcggccggcc agtcgctgct cgaagcggcg
     1021 gaagccggca accacgacgc ggcgctcgct gcgttgaaag ccggcggcga cgtcgctgcg
     1081 cgcgggcccg acggcacgac agcgctgatc tgggccgcgt acaacggcga tgccgtgctc
     1141 gtcgcagagc tcgtcgacgc cggcgccgag gtcgacgcga agaacgagtt cggcgcgtcg
     1201 gcactgtccg aggccgcgat cgccggctac gcggacgtga tcgcggcgtt gctcgaaggc
     1261 ggcgcggacc cgaacatcac gaatcccgag ggcgagacgc cgctgatggc cgtagcccgc
     1321 accggcaatg tcgcagcggc cacgttgctg ctcgacgccg gcgcggacgt taacgcgatc
     1381 gagctctggg gccagcaaag cgcgctgatg tgggccgccg cacagaaaca gccggccatg
     1441 atcaggctgc tgatcgcgcg cggcgccgac gtcgacgcgc gcggtgccgt ccgcaactgg
     1501 gaacgcaagg tcatcaagga gccgcgcccg aaggacatga atcag
//
LOCUS       DATCUD010000309         1528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24465, whole genome shotgun sequence.
ACCESSION   DATCUD010000309 DATCUD010000000
VERSION     DATCUD010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24465"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(27..1178)
                     /gene="metK"
                     /locus_tag="VIQ99_04490"
     CDS             complement(27..1178)
                     /gene="metK"
                     /locus_tag="VIQ99_04490"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007370216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEY9182434.1"
                     /translation="MSKSYLFTSESVGEGHPDKMADQVSDAILDAILAQEPRSRVACE
                     TLTKTGMVIVAGEITTNAVIEVEHIVRKVVLDIGYDHSDKGFDGNTCAVLNALGKQSQ
                     DIAQGVDRKAPEEQGAGDQGLMFGYATNETDSYMPAPIIFSHRLVERQAKVRKNGKLP
                     WLRPDAKSQCTFRYEDDKPVGIEAVVLSTQHAPEIKLKKLQEAVMDEIILPVLPKKWI
                     DKKTKFHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGFARHGGGAFSGKDPSKVDRSA
                     AYAARYVAKNVVAAGLADRCEVQVSYAIGVARPTSVTVETFGTNKVPEKKIIAAVGEI
                     FDLRPYGIVKMLDLLKPVYLPTASYGHFGRDEFSWEKTDRAAALKAAAK"
     gene            complement(1214..>1528)
                     /locus_tag="VIQ99_04495"
     CDS             complement(1214..>1528)
                     /locus_tag="VIQ99_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metFprotein"
                     /protein_id="HEY9182435.1"
                     /translation="VGMPGPASLRQLAKFAMLCGVGASMRMLTTRTSAMANLLSAQAP
                     DDMVTALAKHRGANAQSRFKKIHFFAFGGVVKTAKWANAVISGRFVLNNQATGFRVED
                     GN"
BASE COUNT          264 a          503 c          452 g          309 t
ORIGIN      
        1 gccaggcgag gcgccgtcat ttcacgttac ttcgcagcag ccttcagagc ggcggcgcga
       61 tcggtcttct cccaactgaa ctcgtcgcgg ccgaagtggc cgtaggacgc cgtcggcaga
      121 tagacgggct tcagcaagtc cagcatcttg acgatgccgt aggggcgaag gtcgaagatc
      181 tcgccgacgg ccgcgatgat cttcttctcc ggcaccttgt tcgtgccgaa ggtctcgacc
      241 gtgaccgaag tcggcctcgc gacaccgatc gcatacgaca cttggacctc gcagcgatcc
      301 gcgagcccgg ccgcgacgac gttcttcgcg acgtaccgcg cggcgtaggc ggccgagcgg
      361 tctaccttcg aaggatcctt gcccgagaac gcgccaccgc cgtggcgggc gaagccaccg
      421 taagtgtcga cgatgatctt acggcccgtg agaccgcagt cgcccatcgg gccgccgatt
      481 acgaatcgac cggtcgggtt gatgtggaac ttcgtctttt tgtcgatcca cttcttcggc
      541 aggacgggca ggatgatctc gtccatcacc gcctcttgca gcttcttgag cttgatctcc
      601 ggggcgtgct gcgtcgagag caccacggct tcgatgccaa cgggcttgtc gtcctcgtag
      661 cggaacgtgc actggctctt cgcgtccggg cgcagccacg gcagcttgcc gttcttgcgg
      721 accttcgcct gacgttcgac gaggcgatgc gagaaaatga tcggggctgg catgtagctg
      781 tcggtctcgt tcgtcgcgta accgaacatc aggccctggt cgccggcgcc ctgctcttcc
      841 ggtgctttgc ggtcgacgcc ctgcgcgatg tcctgcgact gcttaccgag cgcgttcaag
      901 acggcgcacg tattgccgtc gaagcccttg tccgaatggt cgtagccgat gtccaagacg
      961 accttgcgaa cgatgtgctc gacttcgatc acggcattcg tcgtgatctc gccggcgacg
     1021 atgaccatgc cggtcttcgt aagcgtttcg cacgcgacgc ggctgcgcgg ctcttgcgcg
     1081 aggatcgcat cgaggatcgc gtccgagact tgatccgcca ttttgtccgg atggccctcg
     1141 cccacggact ccgacgtaaa cagatatgac ttgctcatgg ttgcctacct acttttcatg
     1201 cttgtcaaaa aaatcagttg ccgtcttcaa cccggaaacc agtcgcctgg ttgttcaaga
     1261 cgaaccgccc agagatcaca gcattcgccc acttcgcggt cttcacgacc ccgccgaagg
     1321 caaagaaatg aatcttcttg aatcgcgact gcgcgttcgc gccgcgatgc ttcgccagcg
     1381 ccgtcaccat atcgtccggc gcctgcgcgc tcaggagatt cgccatcgcg ctcgtgcgcg
     1441 tggtcaacat ccgcatcgag gcgcccacac cacacagcat cgcgaacttc gcgagctgcc
     1501 gcagcgatgc cgggcccggc atgccgac
//
LOCUS       DATCUD010000310         2151 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3196, whole genome shotgun sequence.
ACCESSION   DATCUD010000310 DATCUD010000000
VERSION     DATCUD010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3196"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1046
                     /gene="mltB"
                     /locus_tag="VIQ99_04500"
     CDS             <1..1046
                     /gene="mltB"
                     /locus_tag="VIQ99_04500"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEY9182436.1"
                     /translation="RFAVARSSFRRLVAATCLCVSFAALGQARNGEAETEAKRAFIDR
                     MVEKHGFDRAELTSLIDGAVIDQSILDAMARPAERVVPWFEYRDIFLTEERISAGARF
                     WAEHAATLEPVAERYGVAPEMILAIVGVETYFGTRMGRYRVLDALATLAFAYPPRASF
                     FASELEAFLLLARDGQLDATAALGSYAGAMGAGQFIPSSYRAYAVDADTDGKRDLWSN
                     WEDIFGSVANYFSKHGWRTDQPVVELAIRPEDFAGPEPSNSLDLGDTVGSLARMGYVF
                     TTTLPSDAPAAAYSFEAEDGGSEYWVGYHNFRVVTRYNRSTKYALAAYQLSQAIRARY
                     VDTLASNTGSVAQ"
     gene            1163..1894
                     /locus_tag="VIQ99_04505"
     CDS             1163..1894
                     /locus_tag="VIQ99_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY9182437.1"
                     /translation="MSRSDGSEPRSERGNPPFYDVLGKRYHVLPTSAGYVARGVASWY
                     GRDFHGLATSSGETYNMNAMTAAHTTLPLPTWVEVTNLVNGKRVVVKVNDRGPFVDDR
                     LIDLSYAAATQLDMVRAGTTRVEVRAIPAPGAAPRRDATVAATTGILASPQPAVGVAG
                     ESVERMFVQVGAFSQHDNAERLVARLRASGFANPTVVSEADNRRMMHRVRLGPIRDSQ
                     EFDALNARLRAIGVSGSRLVVDTAP"
     gene            1891..>2151
                     /locus_tag="VIQ99_04510"
     CDS             1891..>2151
                     /locus_tag="VIQ99_04510"
                     /inference="COORDINATES: protein motif:HMM:NF012970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY9182438.1"
                     /translation="MSRASVPVRAMLLLVGLVAGRAHAQTAAPPSVPPKLAFKSHYVI
                     DFATETPLVANAPDLQLPPASLTKLMTAYVVFGALESGRMRLD"
BASE COUNT          328 a          718 c          737 g          368 t
ORIGIN      
        1 tgaggttcgc agtagctcgc agctcgttcc gccgtctcgt cgccgctacg tgcttgtgcg
       61 tgtcgttcgc agcgctgggg caagcccgca acggcgaagc cgaaaccgag gcaaagcgcg
      121 ccttcatcga caggatggtc gagaagcacg gtttcgatcg cgccgagctc acgagcctga
      181 tcgacggtgc cgtgatcgac caatccattc tcgacgcgat ggcgcggccg gccgaacggg
      241 tcgtgccgtg gttcgagtac cgcgatatct ttctgaccga ggaacggatc tcggccggcg
      301 cgcgcttctg ggccgagcac gccgcgacgc tcgagcccgt ggcggagcgc tacggtgtcg
      361 cgcccgagat gattctcgcg atcgtcggcg tcgaaaccta tttcggcacc cgcatgggcc
      421 ggtatcgtgt gctcgacgcg ctcgcgacgc tggcgttcgc ttacccgccg cgtgcatcgt
      481 tcttcgcttc ggagctcgaa gcgttcctgt tgttggcccg cgatgggcaa ctcgatgcca
      541 cggcggcctt gggctcgtac gccggcgcga tgggtgccgg gcaattcatc ccgtccagtt
      601 accgcgcgta cgccgtcgac gcggacaccg acggcaagcg cgacctctgg agcaattggg
      661 aggacatctt cggcagcgtc gcgaactact tcagcaaaca tggctggcga acggatcagc
      721 ccgtcgtgga gctcgcgatc aggcccgagg atttcgcagg cccggagccg agtaacagcc
      781 tcgatctcgg cgatacggtc gggtcgttgg cgaggatggg gtacgtgttc acgacgacct
      841 tgccctcgga cgcgccggcg gccgcctact cgttcgaggc cgaggacggt ggctcggagt
      901 actgggtcgg ctatcacaac ttccgcgtgg tgacgcgcta caaccgcagc accaagtacg
      961 cgctcgcggc gtatcagctg agccaagcga ttcgcgcgcg gtacgtcgat acgctggcca
     1021 gcaataccgg gagcgtggcc cagtgatcgc ggggcgcggt tgctcatcgc ggacctgtgc
     1081 gacattgttg ctgatcgggc tgctggccgc ttgtgccggc aaccggcccc agccctccgc
     1141 agccggcggt ggcggcttcc ccgtgagtcg ctcggacgga agcgagccgc gaagcgaacg
     1201 aggcaatccg ccgttttacg acgtgctcgg caagcgctat cacgttctgc cgacgagcgc
     1261 gggctatgtc gcgcgcggcg tcgcgtcctg gtacggccgc gacttccacg ggctcgcaac
     1321 ctcgagcggc gagacctaca acatgaacgc gatgaccgcg gcgcacacga ctctaccgct
     1381 gccgacctgg gtcgaggtca cgaacttggt caacggcaaa cgcgtggtcg tcaaggtcaa
     1441 cgaccgcggg ccgttcgtcg acgaccgctt gatagatctt tcgtatgcgg cggccacgca
     1501 gctcgacatg gtccgcgccg gcacgactcg agtcgaggtg cgcgcgatcc cggcgccggg
     1561 cgcggcgccg cggcgcgacg cgacagttgc cgcgacgacc ggcattctcg cgtcgccgca
     1621 gccggccgtc ggcgtggcgg gtgagtccgt ggaacgcatg ttcgtgcagg tcggcgcgtt
     1681 ctcgcagcac gacaatgccg agcgtctcgt cgcgcggctg cgcgcgagcg ggtttgcaaa
     1741 tccaaccgtg gtcagcgagg ccgacaatcg ccgcatgatg caccgcgtgc gactgggccc
     1801 gatccgcgac tcccaggagt tcgacgcact gaacgcgcgg ttgcgtgcga tcggcgtctc
     1861 gggttcgcgg ctcgtggtgg ataccgcgcc atgagtcgcg cctcggtgcc ggtgcgcgcg
     1921 atgttgctgc tcgtcgggct cgtcgcgggc cgggcgcacg cgcagaccgc agcgccgccg
     1981 tccgtgccgc cgaagctcgc gttcaagagt cactatgtca tcgacttcgc gaccgaaacg
     2041 ccgctcgttg cgaatgctcc cgacctgcag ttgccgcccg cgagcctgac caagctcatg
     2101 acggcctatg tcgtgttcgg cgcgctcgag tccggccgca tgcggctcga c
//
LOCUS       DATCUD010000311         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24468, whole genome shotgun sequence.
ACCESSION   DATCUD010000311 DATCUD010000000
VERSION     DATCUD010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24468"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..718
                     /locus_tag="VIQ99_04515"
     CDS             134..718
                     /locus_tag="VIQ99_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008437130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEY9182439.1"
                     /translation="MGTIVTLVILAAIVLWGISMYNNLVSSRNRVGNAFSQIDVQLTR
                     RYDLIPNLIEAVKGYMAHERGTLEAVINARNAAAAGLKKAAADPADPAAIQALGAAET
                     ALAGSLGRLFALAEAYPDLKANQNMQHLQEELTSTENKVAFARQAFNDAVLSYNNACQ
                     SFPGNLLANNFGFKTAEFLEIEQPEKRAVPKVSF"
     gene            743..>1524
                     /locus_tag="VIQ99_04520"
     CDS             743..>1524
                     /locus_tag="VIQ99_04520"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY9182440.1"
                     /translation="MNFFARQEQSRRTSRVLVGFFLLAFVVVALATTVVVSAALRMYT
                     ENNALFIGTETWREWLEGHGGLVVTVAFGSLGLMILASLYRAATLARGGGHVARMLGG
                     TPVNREGSDPLHKRLVNVVEEIALASGLPVPEIYVLEQESGINAFAAGLTPADAAITV
                     TRGALERLERAELQGVIAHEFSHILNGDMRLNQQLIGLSFGILVLALVGRWLLRSVRF
                     AGRSRGRNNGGVAAALAIGLALVIIGGIGVFLCRMIKAGVSR"
BASE COUNT          258 a          514 c          502 g          250 t
ORIGIN      
        1 ttctccgacc cagcccgcac gcgcgggcag cgcgacgagc gccgcgagcc cgcacgcgag
       61 cgccgcaagt cgatggcgaa gaccgcggtg ccagcgtatt ctcgcaggct ccgaatcggg
      121 aaggagccta ctcgtgggaa cgatcgtcac gctcgtgatc ctcgcagcaa tcgtgttgtg
      181 gggcatctcg atgtacaaca atctcgtgag ctcgcgcaac cgcgtgggta acgctttctc
      241 gcaaatcgac gtgcagctca cgcgccgcta tgacctgatt ccgaacctga tcgaggccgt
      301 caaaggctac atggcccacg agcgcggcac tctcgaggcc gtgatcaacg ctcgcaacgc
      361 ggcggccgca ggcttgaaga aggccgccgc cgaccctgcg gatcccgcgg caatccaggc
      421 ccttggcgcc gccgagaccg cgctggctgg atcgctgggc cgcttgttcg cgctcgcgga
      481 agcgtatccc gacctgaaag cgaatcagaa catgcagcac ttgcaagagg agctgacgtc
      541 gacagaaaac aaggtcgcgt tcgcccgcca agcgttcaac gacgcggtgc tgagctacaa
      601 caacgcatgt cagagcttcc ccggtaacct gctcgcgaac aacttcggct tcaagacggc
      661 cgagttcctg gaaatcgagc aaccggagaa gcgcgccgta ccgaaggtct cgttctaacg
      721 ccgcatcgcg ccggctgccg ccgtgaactt cttcgcgcgc caagagcagt cgcgccgcac
      781 gagccgcgtg ctcgtcggct tttttcttct cgcgttcgtg gtggtcgctc tcgcgacgac
      841 ggtggtcgtc tcggccgcgc tccggatgta caccgagaac aacgcgctgt tcatcggcac
      901 ggagacctgg cgcgagtggc tcgaaggcca cggcgggctc gtcgtcacgg tggcgttcgg
      961 gtcccttggg ctcatgatcc tcgcgagcct ctatcgcgcg gcgacgctcg cgcgcggcgg
     1021 cgggcacgtt gcgcggatgc tcggcggcac gcccgtgaac cgcgaaggca gcgacccgct
     1081 gcacaagcgg ctcgtcaacg tcgtcgagga gatcgcgctg gcatcgggcc tgcccgtgcc
     1141 ggagatctac gtgctcgagc aggagtccgg catcaacgcg ttcgcggccg ggctgacgcc
     1201 ggccgacgcc gcgatcacgg tgacacgcgg ggcgctcgag cggctcgagc gcgccgagct
     1261 gcaaggagtc atcgcgcacg agttcagcca catcttgaac ggcgacatgc gcttgaacca
     1321 gcagctgatc gggttgtcgt tcggcattct cgtgctcgcg ctcgtgggcc ggtggctgct
     1381 ccgcagcgtc cgcttcgcag gtaggtcccg cggccgcaac aacggcggtg tcgccgcggc
     1441 cctcgcgatc ggcctcgcgc tcgtgatcat cggcggcatc ggggtgttcc tgtgccgcat
     1501 gatcaaagcc ggagtatcgc gcaa
//
LOCUS       DATCUD010000312         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_52817, whole genome shotgun sequence.
ACCESSION   DATCUD010000312 DATCUD010000000
VERSION     DATCUD010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52817"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1565
                     /locus_tag="VIQ99_04525"
     CDS             <1..1565
                     /locus_tag="VIQ99_04525"
                     /inference="COORDINATES: protein motif:HMM:NF039587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF5916 domain-containing protein"
                     /protein_id="HEY9182441.1"
                     /translation="AYNPSISGTAVGFEGLDPRGLDVVPSASLRQSKVFATVVDDSSD
                     SELEPSLDIVYKLTPSLNGSLTFNTDFSATEVDDRQVNLTRFGLFFPEKRDFFLREAD
                     IFEFGRIGAQQDNISVTQPSRENGRPFFSRRIGLSPTGQPVDLDYGGKVSGRIGRWEL
                     GALSIRQDESRLTPTDTLSVVRAKAGVLQESFLGVIATHGNPSLDLDNSLVGVDFLYR
                     NTRLPGGRSLETEAWYQQSDTEGVDGGQAAAGIGFRIPSTNGFRGGVQLRELDALFNP
                     ALGYVDRRGIQAASFDVGYTYRPAGGAYIQSILTTLDGERTDLQSGLPQTETLTFRPF
                     NITSRTGDALMMVYRDQREVLYRPFEISPGIVIGEGDYTFADLGMRLGTSNHRKFAGF
                     LMYVTGDFYDGTRVNINGDLTWRPSARFRTFIGYNYNEIELPAGNFETRLVRFGFDVA
                     FSSTVSWVNLIQYDNVTETMGANLRMVWIPEAGKEFYFVINQNLQDFDRDNTFQSLTS
                     DVTAKMSYTFRF"
BASE COUNT          320 a          562 c          550 g          336 t
ORIGIN      
        1 gcgcctataa cccgagcatc tcggggactg cggttggctt cgagggactc gacccgcgcg
       61 ggctcgacgt cgtgccgtcg gcgagcctgc ggcagagcaa agtgtttgcg acggtggtcg
      121 atgattcgag cgactcggag ctcgagcctt cgctcgatat cgtctataag ctcacgccgt
      181 cgctgaatgg ttcgctcacg ttcaacacgg acttctcggc gaccgaagtc gacgatcgac
      241 aggtcaatct gacgcgcttc ggcttgttct ttcccgaaaa gcgcgatttc ttcctccgcg
      301 aggccgacat tttcgagttc ggccgcatcg gcgcgcagca ggacaacatc tcggtgacgc
      361 agccctcgcg cgagaacggc cggccgttct tttcccggcg catcggcttg agcccgaccg
      421 ggcagcccgt cgatctcgac tacggcggca aggtcagcgg ccgcatcggg cggtgggagc
      481 tgggggcgtt gtcgatacgc caagacgaat ctcggctaac gccgacggat acgctgtcgg
      541 tagtcagggc caaagccggg gtgctccagg aatcgtttct cggcgtgatt gccacacacg
      601 gcaatccgag cttggacctc gacaactcgc tcgtgggtgt cgatttcctg taccggaaca
      661 cccgcctgcc cggcggccgc tcgctcgaga cggaagcgtg gtaccagcag agtgataccg
      721 agggcgtcga cggcggccaa gccgcagccg gcatcggctt ccggatcccg agcacgaacg
      781 gctttcgcgg cggcgtgcag ctgcgcgagc tcgatgcgct gttcaacccg gctctgggct
      841 acgtcgaccg gcgcggcatc caggccgcct cgttcgacgt cgggtacacg tatcggccgg
      901 ccggcggagc gtacattcaa tcgatcctga cgacgctcga cggcgagcgc accgatctgc
      961 agagcggttt gccgcaaacg gagacgttga cgttcaggcc gttcaacatc acgagcagga
     1021 ccggtgacgc gctcatgatg gtctatcgcg atcagcgcga ggtactgtat cggcccttcg
     1081 aaatctcgcc cggcatcgtc atcggagaag gggactacac gttcgccgat ctcggcatgc
     1141 ggctcggtac gagcaatcac cgcaagttcg caggcttttt gatgtatgtg accggggatt
     1201 tctacgacgg cacccgcgtc aacatcaacg gcgatctcac gtggcggccg tccgcacgct
     1261 ttcggacctt tatcggctac aactacaacg agatcgagct gccagccggc aacttcgaaa
     1321 cgcggctcgt gcgcttcggg ttcgacgtgg cgttctcctc gacggtgtcg tgggtcaacc
     1381 tgatccagta cgacaacgtg accgagacga tgggcgcgaa cctgcgcatg gtgtggatcc
     1441 ccgaggccgg caaggaattc tatttcgtga tcaaccagaa tctgcaggat ttcgaccgcg
     1501 acaacacgtt ccagtcgctg acgtcggacg ttaccgccaa gatgagctac acgttccggt
     1561 tctaggagca cggcagctcg cgcataggcg cgacgtcgac ggctcgccgg gcggataaca
     1621 cgccttcgcg atggccttcg cggtagtgtc agcgcaatgg ccgcagcgag cgcccgctac
     1681 caacttcaca cggctcgcgc cgtgcacggt ttcgtcaaat tcggttagct cccactcccc
     1741 acttttcttc agatagggct tcgctgcc
//
LOCUS       DATCUD010000313         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_74165, whole genome shotgun sequence.
ACCESSION   DATCUD010000313 DATCUD010000000
VERSION     DATCUD010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74165"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VIQ99_04530"
     CDS             complement(<1..226)
                     /locus_tag="VIQ99_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEY9182442.1"
                     /translation="MRFLMVVLALVLVLLQARLWLSNGGLREVWRLEAEVARRAEDNS
                     RLAARNASLEAEVRDLKQGTAAAEERARTEL"
     gene            complement(227..1519)
                     /gene="eno"
                     /locus_tag="VIQ99_04535"
     CDS             complement(227..1519)
                     /gene="eno"
                     /locus_tag="VIQ99_04535"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEY9182443.1"
                     /translation="MSAIKDVMGLEIIDSRGNPTVEAEVVLASGARGRAAVPSGASTG
                     SREAHELRDGDKKRYLGKGVSKAVANVNGEIRKAVVGLDSAGQGKLDRRMIELDGTPN
                     KARLGANAVLAVSLANAKAHAAERGLALYELLGEGKREYTLPLPMMNIINGGAHADNS
                     VYIQEFMILPVGAPTFGECLRYGVEVFHALKSVLKAKGMSTAVGDEGGFAPDLRSNEE
                     ALQTIAEAVQKAGYELGRDVVLGLDVASSEFFADGAYTLESEQRKFSSAEFVDFLAEL
                     VARYPIVSIEDGMAENDWDGWARLSQRLRDKIQLVGDDLFVTNTAILQQGIDRKIANS
                     ILIKPNQIGTLTETLEAIALADKAGYSAVVSHRSGETEDATIADIAVATAATQIKTGS
                     LCRSDRLAKYNQLLRIETSLGVKAKFAGAKAFPGYVKD"
     gene            complement(1535..>1730)
                     /locus_tag="VIQ99_04540"
     CDS             complement(1535..>1730)
                     /locus_tag="VIQ99_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019593221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY9182444.1"
                     /translation="ARAAVAAGIAGLFMETHPDPDSALCDGPSAWPLAKVAVLLEQLK
                     EIDALVKARPFLETEFRTVH"
BASE COUNT          281 a          617 c          522 g          310 t
ORIGIN      
        1 cgagctcggt ccgagcgcgc tcctcggccg cggcggtgcc ctgcttcaga tcgcgcacct
       61 cggcctcgag cgacgcgttg cgcgccgcca agcggctgtt gtcctcggcg cgtcgggcga
      121 cctcggcttc gagccgccac acctcgcgca ggccgccgtt cgatagccac aagcgcgcct
      181 gcagcagcac gagcacgagc gccaacacga ccatcaagaa gcgcatctag tccttgacgt
      241 aacccgggaa cgccttcgcg ccagcgaact ttgccttaac accgagtgaa gtttcaatcc
      301 taagcagctg attgtacttg gctagacggt cggaccggca cagcgagccc gtcttgatct
      361 gggtcgcggc cgtggcgacc gcgatgtcgg cgatcgtcgc gtcctcggtc tcgccggagc
      421 ggtgtgagac gacggccgag tatccggcct tgtccgccag cgcgatcgcc tcgagcgtct
      481 cggtcagcgt cccgatctga ttcggcttga tcaggatgct gttcgcgatc ttcctgtcga
      541 tgccttgctg caagatcgcc gtgttcgtca cgaacaggtc gtcgccgacg agctggatct
      601 tgtcgcgcaa gcgctgactc aagcgagccc agccgtccca gtcgttctcg gccatgccgt
      661 cctcgatcga gacgatcgga tagcgcgcga cgagctccgc gaggaaatcc acgaactcgg
      721 ccgacgaaaa cttccgctgc tcggactcga gcgtataggc gccgtccgcg aaaaactccg
      781 agctcgcgac atcgagcccc aagaccacgt ctcgcccgag ctcgtagccg gccttctgga
      841 ccgcttccgc gatcgtctgc aacgcttcct cgttcgaacg gaggtccgga gcgaagccgc
      901 cctcgtcgcc gacggccgtg ctcattccct tcgccttcag cacggacttg agcgcgtgaa
      961 aaacctcgac gccgtagcgc aggcattcac cgaacgtcgg cgcaccgacc ggcaggatca
     1021 taaactcctg aatgtagacg ctgttatccg cgtgcgcgcc gccgttgatg atattcatca
     1081 tcggcagcgg cagcgtgtac tcgcgcttgc cttcgccgag cagctcgtag agcgcgaggc
     1141 cgcgttccgc cgcgtgcgcc ttcgcattcg cgagcgacac ggccaacacc gcgttcgcgc
     1201 ccaggcgcgc cttgttcggc gtgccgtcga gctcgatcat gcgccggtcg agtttgcctt
     1261 gcccggccga gtcgaggcct acgaccgcct tgcgaatctc gccgttcacg ttcgcgacgg
     1321 ctttgctcac acccttgccg agatagcgct tcttgtcgcc gtcgcgaagc tcgtgcgcct
     1381 cgcgcgaccc cgtcgaagcg cccgagggca ccgccgccct gccgcgcgcg ccgctcgcca
     1441 gcacgacctc ggcctcgacc gtcgggttgc cccgcgaatc gatgatctcg aggcccatca
     1501 catccttgat cgcactcatg aaggctcctg aacgctaatg cacggtacga aattcggttt
     1561 cgagaaacgg ccgggctttg acgagcgcat cgatctcctt gagctgctcg agcaacaccg
     1621 cgaccttcgc gagcggccac gcgctcgggc cgtcgcagag cgcgctgtcg ggatcgggat
     1681 gcgtttccat gaataagccc gcgattccgg ccgcgaccgc cgcgcgcgcg
//
LOCUS       DATCUD010000314         2130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59705, whole genome shotgun sequence.
ACCESSION   DATCUD010000314 DATCUD010000000
VERSION     DATCUD010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59705"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2130)
                     /locus_tag="VIQ99_04545"
     CDS             complement(<1..>2130)
                     /locus_tag="VIQ99_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182445.1"
                     /translation="RLLVLLVAAGLAVAGYRAFLALPIDAFPDVSPTQVKIIIKAPGM
                     TPEEVETRITAPIEVELLGIPSQTMLRSITKYALTDITLDFAEGTDIYWARQQVGDRL
                     AGVAGSLPEGIEGGIAPMTTPLGEMFMFTVDGPLSLSERRSLLEWVIRPALRTVPGIA
                     DVNVLGGHSRSFEVVPDPVRMAARGVDTLALEAAITANNRNDGAGRINEGEEALLVRS
                     EGRIATPEDLAAIVVAVRDGIPIRVADVATVQIGSITRYGAVTQNGEAEAVQGLVLGL
                     RGANAQDVVGGARAKLAEIAATLPEGVEVRVFYDRGDLVRQAVATVTRALGEAVVLVL
                     VLLVLFLGDFRAAVTVALVLPLAALATFLAMRQAGMSANLMSLGGLAIAIGMLVDAAV
                     VVVENIATHLGSEGSGQRLPRLHRIYRAVREVAVPMVSGIAIIILVFLPLLSLEGLEG
                     KLFGPVALTISFALGGSLLLSLTVIPVLASYLMRAVAHAEPWLPRKLGELYRPLLERA
                     LANGNRVIAGAVAALALTAAVYPFIGKTFLPTMDEGDLIVQLEKLPSITLAESVAMDL
                     RVQQALLARVPEVARIVARVGSDEIGMDPMGLNESDMFVVLKPRSEWRSGSKDDVIEA
                     IRAVLDEFPGVAYGFTQPIEMRTAEMLTGTRGDVAVKLFGADLDVLAQKADEIAAALR
                     AVAGSEDVFVARNSGMQYLNVAVDRAAA"
BASE COUNT          381 a          752 c          685 g          312 t
ORIGIN      
        1 gcggccgcgc gatcgacggc cacgttcaga tactgcatgc cgctgttgcg cgcgacgaac
       61 acatcctcgc tgccggcgac ggcgcgcagc gccgcggcaa tctcgtccgc cttctgtgcc
      121 agcacgtcga gatcagcgcc aaacaacttc acggctacgt caccgcgcgt tcccgtgagc
      181 atctcggccg tgcgcatctc gatcggttgc gtgaagccgt aggccacgcc cgggaactcg
      241 tcgagcaccg cgcgaatcgc ctcgatgacg tcgtccttcg agccgctccg ccactcgctg
      301 cgcggcttca gcacgacgaa catgtcggac tcgttcaggc ccatgggatc catgccgatc
      361 tcgtccgagc cgacgcgggc gacgatcctc gcgacctcgg gcacacgcgc aagcagcgcc
      421 tgttgcacgc gcagatccat ggcgacggat tccgcgagcg tgatcgacgg cagcttctcg
      481 agctgcacga tcaggtcgcc ctcgtccatc gtcggcagaa acgtcttgcc gatgaagggg
      541 tagacagcgg cggtcagcgc gagcgccgcg acggccccgg cgatcacgcg gttgccgttg
      601 gcgagcgcgc gctcgagcag cggccgatag agctctccga gcttacgcgg caaccacggc
      661 tccgcgtgcg caacggcacg catcaagtac gaagcgagca ccggaatgac ggtcagcgac
      721 agaagcaacg agccgccgag cgcgaagctg atcgtgagcg cgacgggccc gaagagcttg
      781 ccttcgagtc cctcgaggga caggagcggc aagaacacga ggatgatgat ggctatacct
      841 gagaccatgg gcacggcgac ctcgcgcacg gcacggtaga tcctgtgcag ccggggcagc
      901 cgttggcccg agccctcgct accgaggtgc gtcgcgatgt tctccacgac cacgacggcc
      961 gcatcgacga gcatgccgat cgctatcgcc agcccgccca agctcatgag attcgccgac
     1021 atgccggcct ggcgcatcgc gagaaacgtc gcgagtgcgg ccaacgggag cacgagcgcg
     1081 accgttaccg ccgcccggaa gtcgccgagg aacaatacga gcaacacgag cacgagcacg
     1141 acggcctcgc cgagggcacg cgtcaccgtc gccacggcct gccgcacgag atctccacgg
     1201 tcgtagaaca cacggacttc gacgccctcg ggcaacgtgg cggcgatctc cgcaagcttc
     1261 gcgcgcgccc cgccgacgac gtcttgagcg ttggcgccgc gcagaccgag caccaggccc
     1321 tgaacggctt cggcttcgcc gttctgcgtc acggcgccgt agcgagtgat cgagccgatc
     1381 tgcacggtcg cgacgtcggc gactcgaatc ggaatgccgt cgcgaacggc gacgacgatc
     1441 gccgcgagat cttccggcgt cgcgatacgc ccctcggagc ggacgaggag tgcctcctcc
     1501 ccttcgttga tgcgcccggc cccgtcgttg cgattgttgg ccgtgatcgc agcctcgagc
     1561 gccagcgtat cgacgccccg cgcggccatg cgcaccgggt ccggaacgac ctcgaagctg
     1621 cgcgaatggc cgcccagcac gttgacgtcc gcgatgccgg gcacggtgcg cagcgccggc
     1681 cgtatgaccc actcgagcag cgagcgccgc tcgctcaggc tcaacgggcc gtcgaccgtg
     1741 aacatgaaca tctcgccgag cggcgtcgtc atcggcgcga tgccgccttc gataccttcc
     1801 ggtaatgagc cagcgacgcc cgcgagccgg tcgccgacct gttggcgcgc ccagtagatg
     1861 tcggtgcctt ctgcgaaatc cagtgtgata tcggtcagcg cgtatttcgt gatcgaacgc
     1921 agcatcgtct ggctcggaat gccgagcagc tcgacctcga tcggcgccgt gatccgcgtc
     1981 tccacttcct ccggcgtcat gccgggagcc ttgatgatga tcttgacctg cgtcggggac
     2041 acgtcgggga acgcatcgat cggcaacgca aggaacgccc ggtaacctgc caccgcaagc
     2101 cccgctgcca cgagcaagac cagcaggcgc
//
LOCUS       DATCUD010000315         2110 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17347, whole genome shotgun sequence.
ACCESSION   DATCUD010000315 DATCUD010000000
VERSION     DATCUD010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17347"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..1219)
                     /locus_tag="VIQ99_04550"
     CDS             complement(20..1219)
                     /locus_tag="VIQ99_04550"
                     /inference="COORDINATES: protein motif:HMM:NF015418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEY9182446.1"
                     /translation="MTEVADAERSILEHMPRFPPRHEALAACVGRALAEDIDAERDQP
                     PFDRVMMDGIAIAYRDWARGIRAFECVGTQAAGAPPLAVVAPAQCVEVMTGTALPLGT
                     DTVVPIERVQRNGTTAAVTPTAAVKAEQFVHRRGSDRAAGSRVLRAGTLLNAPEIAVL
                     AGAGRATALVAGLPHVAVISTGDELVDAGKPVAAHQIRSTNDRAIEASLTQHRLGQVT
                     RARLRDDANALAIAIDRLDMELDVLVLSGGVSMGQFDFVPSVLEELGAKLVLHKVEQR
                     PGRPMWFGISARGKPIFALPGNPVSTLVCATRYLLPALRHAAGLAESPRELVELTAPV
                     DASPTLTLFVPVALSSSERGTLLAEPRPTNTSGDFVALAGTDGFVELAAKHGAYAPGT
                     VARLFRW"
     gene            1292..1807
                     /locus_tag="VIQ99_04555"
     CDS             1292..1807
                     /locus_tag="VIQ99_04555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182447.1"
                     /translation="MAKVLCCGIAMCLWSSLVLGQRSSIPEISEEQADNRTVIGAANE
                     YLAAGAEAIRVKQYDDGIRLTRIGLERPTSPRDRAAGLSNLCAAHAAKNEPDAAIGYC
                     TESLTINDQNWRAYSNRAYAYYLKRMFNEADTDLDIALAINPNARQMPQIRGMMNERR
                     LRGRITMEEHQ"
     gene            1852..>2110
                     /locus_tag="VIQ99_04560"
     CDS             1852..>2110
                     /locus_tag="VIQ99_04560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182448.1"
                     /translation="MAAVSEVAHARDIDPIGTWSCVVWGHPDFGDERVLLRFDTDGVA
                     RLARLENEAVPAWTGLTAWVREDREMRFSDPRTGRQYLADLR"
BASE COUNT          357 a          692 c          725 g          336 t
ORIGIN      
        1 atgcgggtcg gaccgctcgc taccagcgga acaggcgcgc gacggtgccg ggtgcgtaag
       61 cgccgtgctt ggccgcgagc tcgacgaagc cgtccgtgcc tgcgagcgcc acgaagtcgc
      121 cggatgtgtt cgtggggcgc ggttctgcca gcagcgtgcc gcgctcggac gacgacaacg
      181 ctacggggac gaacaaagtc agcgtcggcg aagcgtccac gggcgcagtg agctcgacga
      241 gctcgcgcgg cgactcggcg agcccggccg cgtgacgcag cgccggcaac agataacgcg
      301 tcgcgcacac cagcgtcgag acgggattgc cgggcagagc gaaaatcggt ttgccgcgcg
      361 cgctgatgcc gaaccacatc ggccgacccg ggcgctgctc gaccttgtgc agcacgagct
      421 ttgcgccgag ctcctccaga accgaaggca cgaagtcgaa ctggcccatc gaaaccccgc
      481 cgctcagcac gagcacgtcg agctccatgt cgagtcgatc gatcgcgatc gcgagcgcgt
      541 tggcatcgtc gcgcaagcgc gcacgcgtca cctgcccgag tcggtgctga gtcaggctcg
      601 cttcgatggc tcgatcgttg gtcgatcgaa tctgatgcgc cgcgacgggc ttgccggcgt
      661 cgacgagctc gtcaccggtc gaaataacgg cgacgtgcgg cagcccggcg accagcgctg
      721 tcgcgcgtcc cgcgcccgcc agcacagcga tctccggagc gttcagtaat gtgccggctc
      781 gcaatacgcg gctgccggcg gcacggtcgc tgccgcgccg gtgcacgaac tgttccgctt
      841 tgaccgcagc agtgggcgtg accgcggccg tggttccgtt ccgctgcacg cgctcgatcg
      901 gcaccacggt gtcggtgccg agcggcaacg cggtgcccgt catgacctcg acgcactgcg
      961 ccggtgcaac aaccgcgagc ggtggggcgc ccgcggcctg cgtgccgacg cattcgaacg
     1021 cccggatccc acgcgcccag tcgcggtagg cgatcgcgat cccgtccatc atgactcggt
     1081 cgaacggggg ttggtcgcgt tcggcgtcga tgtcctcggc cagcgcccgg ccgacgcagg
     1141 ccgccaatgc ctcgtgccga ggcggaaatc tcggcatgtg ctcgaggatc gagcgctctg
     1201 cgtcggcgac ttctgtcatg tggcgcgggg tcgtgcggta gctgttccgg ctcccgaggg
     1261 cgggactata ctagtccctg aggaagcgag catggccaag gttttgtgct gcggcatcgc
     1321 catgtgtctc tggtcgagct tggtgctcgg ccaacgctcg tccatacccg agatctccga
     1381 agagcaggcc gacaaccgca ccgtgatcgg tgcggcgaac gagtatctcg cggccggagc
     1441 cgaagcgatt cgcgtgaagc agtacgacga cggcattcgc ctgacgagga tcggcctcga
     1501 acgcccaact tcgccgcgcg atcgtgccgc gggattgtcg aacctgtgcg cggcacacgc
     1561 ggcgaagaac gagcccgacg ccgcgatcgg ctattgcacc gagtcgctca cgatcaacga
     1621 tcagaattgg cgcgcgtaca gtaaccgcgc ttacgcatat tacttgaagc ggatgttcaa
     1681 cgaggccgac acggatctcg acatcgcgtt ggcgatcaat ccgaacgcgc ggcagatgcc
     1741 gcagattcgc ggcatgatga acgagcggcg gctccgcggc cgaatcacga tggaggagca
     1801 ccaataactc agtgggctcg cagccttgcg atgatctgta ccgtgacctg gatggccgcg
     1861 gtgagcgaag ttgcgcacgc aagggacatc gatccgatcg ggacgtggag ctgcgtcgtg
     1921 tggggccacc ccgacttcgg cgacgagcgt gtgctgctcc gcttcgatac cgacggcgtc
     1981 gctcgtctcg cgcgtctcga gaacgaagcc gtgccggcgt ggactggttt gaccgcctgg
     2041 gtccgggagg atcgcgaaat gcgcttcagc gatccgcgca cgggccggca gtatctcgcc
     2101 gatttgcggc
//
LOCUS       DATCUD010000316         1819 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10038, whole genome shotgun sequence.
ACCESSION   DATCUD010000316 DATCUD010000000
VERSION     DATCUD010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10038"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..566
                     /locus_tag="VIQ99_04565"
     CDS             <1..566
                     /locus_tag="VIQ99_04565"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="catalyzes the hydrolysis of a monocarboxylic acid
                     amid to form a monocarboxylate and ammonia; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY9182449.1"
                     /translation="PVEARFLREVADAERAILLAEFRDGINEYLARVERGPRTLEELI
                     AFNDAHATEVMPLFGQELLIESAASGGRSAAAYAAAMEVAAAARAALGELFAARELDA
                     LVAPTNGRAWRNDAQGGGRIGSSRIAAVSGYASMTVPIEVSADLPLGIALIVQPGDEH
                     VMLTIGAALEKLRGPFPEPRFLGSLDD"
     gene            complement(574..1278)
                     /locus_tag="VIQ99_04570"
     CDS             complement(574..1278)
                     /locus_tag="VIQ99_04570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019530233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047443 -
                     4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxy-4-hydroxy-2-oxoadipate
                     aldolase/oxaloacetate decarboxylase"
                     /protein_id="HEY9182450.1"
                     /translation="MRNNVAVRNIDRADAGVVTALGELGVATVHEAQGRTGLLQPYVR
                     PIYSGARIGGSAITVLLHPGDNWMLHVAVELAKPGDIMVVAVSAPNSDGMFGDLLATS
                     FRARGVLGLVIDAGVRDVKDLTEMQFPVWSRAISAKGTVKATVGSVNVPVVCAGMLVN
                     PGDAIVADDDGVVVVPRRNAPAVLDASKKRVANEEQKRAKLAAGELGLDLYKMREPLA
                     KAGLVYYDTLADLDKS"
     gene            1342..>1819
                     /locus_tag="VIQ99_04575"
     CDS             1342..>1819
                     /locus_tag="VIQ99_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009475692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY9182451.1"
                     /translation="MTEVAPLTGLKVVDMTEALAGPYCAMLLGDFGADVIKVERPGDG
                     DQARGWGPPFLEGESAYFLAVNRNKRSIELDIKKADDLQFLETLIERADVFLTNNPRL
                     DSLARSRLDPKTLRARNPRLVYGAISGYGHTGPKANRSGYDIIAQGEAGLMALTGPV"
BASE COUNT          299 a          599 c          609 g          312 t
ORIGIN      
        1 atccggtcga agcgcgcttc ctgcgcgagg tcgcggacgc cgagcgcgcg atcctgctcg
       61 ccgagttccg cgatgggatc aacgagtatc tggcccgcgt cgagcgcggt ccgcgtacgc
      121 tcgaagagct gattgctttc aacgacgcgc atgcgacgga ggtcatgccc ctgttcggcc
      181 aggagttgct gatcgagtcg gcagcgagcg gcggccgctc ggccgccgcc tacgccgccg
      241 ccatggaggt ggcggccgcc gcgagggcgg cgctgggaga gctcttcgcc gcacgcgagc
      301 tcgatgcgct ggtcgcaccc acgaacgggc gcgcctggcg caacgatgcc cagggaggcg
      361 gtcgtatcgg cagctcgcgg atcgccgccg tatcgggtta tgcgagcatg accgtgccga
      421 tagaggtttc tgccgatctg ccgctcggca ttgcgctgat cgtgcagcct ggggatgagc
      481 acgtcatgct cacgatcggc gccgccctcg aaaaattgcg cggcccgttc cccgaaccgc
      541 gattcttggg ttcgctcgac gactgacggg tcgtcagctt ttgtcgagat cggcgagagt
      601 gtcgtagtag acgagccccg ccttcgccag cggctcgcgc atcttgtaga ggtcaaggcc
      661 gagctcgccg gccgccagct tcgcgcgttt ctgctcctcg ttcgcgacac gcttcttgct
      721 cgcgtccaac acggccggtg cgttgcggcg cgggacgacg acgacaccgt cgtcgtcggc
      781 cacgatcgca tcgccggggt tcacgagcat tcctgcgcac accacgggca cgttcacgga
      841 gccgaccgtc gccttgaccg tgcctttcgc ggaaatggcc cggctccaca ccgggaactg
      901 catctccgtc agatccttga cgtcgcgaac tccggcgtcg atcacgagcc cgaggactcc
      961 gcgcgcgcga aacgacgtcg cgagcaaatc gccgaacatg ccgtccgagt tgggcgcgct
     1021 gacggctaca accatgatat cgccgggctt cgcgagctcg acggcgacgt gcagcatcca
     1081 gttgtcgccg ggatgcagca gaaccgtgat cgcgcttccg ccgatgcgcg cgccggaata
     1141 gatcggccgc acgtacggct gcagcagccc ggtgcgtcct tgcgcttcgt ggacggtggc
     1201 gacgccgagc tcgcccagag ccgtcacgac acccgcatcc gcgcgatcga tgttgcgtac
     1261 tgcgacgttg tttctcacga ggtctccgat tgacggacgc ttatactaac cgccgacatt
     1321 agagcacaac ctggagagac cgtgaccgag gtggcgccgc tgaccggact caaagtcgtc
     1381 gacatgacgg aggcgctcgc gggcccctat tgcgcgatgt tgctcggcga tttcggcgcc
     1441 gacgtgatca aggtcgagcg ccccggggac ggtgatcagg cacgcggctg ggggccgccg
     1501 tttctcgagg gcgaaagtgc gtacttcctc gccgtgaatc gcaacaagcg cagtatcgag
     1561 ctcgatatca agaaagcgga cgacttgcag tttctcgaga cgttgatcga gcgcgcggat
     1621 gtgttcctga cgaacaaccc gcggctcgat tcgttggcgc gttcgaggct cgatccgaag
     1681 accctgcgcg cgcgcaatcc gcggctcgtg tacggcgcca tcagcggcta cgggcacact
     1741 gggccgaaag cgaaccgcag cggctacgac atcatcgcgc agggtgaggc gggcttgatg
     1801 gcgttgaccg ggcccgtcg
//
LOCUS       DATCUD010000317         1776 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59744, whole genome shotgun sequence.
ACCESSION   DATCUD010000317 DATCUD010000000
VERSION     DATCUD010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59744"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VIQ99_04580"
     CDS             complement(<1..431)
                     /locus_tag="VIQ99_04580"
                     /inference="COORDINATES: protein motif:HMM:NF019644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY9182452.1"
                     /translation="MASRHQQVYGLHAVRAVLERRPETLVAAKVLREASGKLADLTRA
                     LAARGVAIERVARADLDRLTDGGVHQGIVVEVHAAPEFSVGDFEELVLARGRALRLLV
                     LDGVEDPRNLGACLRTADAAGIDAVVVPKDHSAKLTAVAVKT"
     gene            complement(424..>1776)
                     /locus_tag="VIQ99_04585"
     CDS             complement(424..>1776)
                     /locus_tag="VIQ99_04585"
                     /inference="COORDINATES: protein motif:HMM:TIGR00358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HEY9182453.1"
                     /translation="AVYCEAHGEGWRVLVAIADVSHYVPHDTPLDREARGRGTSVYFP
                     DRVVPMLPEELSNGLCSLKPHVDRLCVVCEMEVSPGGEVTRSRFYDAVMRSAARLTYT
                     EAATILATVHPHGEHAKLQPALKDLEAVYGAFAARRRRRGAIDFDLPETKIELDERGQ
                     VKNVRAAERLVTHKIIEECMIAANVEAAKRIQKGRLPTLYRVHEGPDEAKLEELLLFL
                     RTFGHKLTPHKVSPKDLNRIIESVQGRPEEELVETVVLRSMSQARYQPGNVGHFGLAL
                     GAYAHFTSPIRRYPDLLVHRALKWLNGKRSPKGFRYGMEEMEQLGMHCSSTERRADEA
                     TREVAERLKCVYLKERVGETFDVVISSVVPFGLFVRLPEIQADGLVHVTALPRDYYHR
                     DPTGTSLTGERSGNAYRLMESIKVKLVAVNVEERKVDFVPVERDDAAPQPRRGRRRRG
                     "
BASE COUNT          289 a          620 c          572 g          295 t
ORIGIN      
        1 gtcttcacgg cgacggccgt cagcttcgcc gagtggtctt tcggcacgac gacggcatcg
       61 atgccggccg cgtcggcggt acgcagacag gcaccgagat tgcgcgggtc ttcgacgccg
      121 tcgagcacga gcaggcgcaa cgccctgccg cgcgcgagca ccagctcctc gaagtcgccg
      181 accgagaact ccggcgcggc gtgaacctcg acgacgatac cctggtgcac gccgccgtcg
      241 gtcaagcgat cgagatccgc gcgtgcgacg cgctcgatcg cgacgccacg agccgcgagc
      301 gcgcgtgtca agtccgcgag cttgccgctg gcctcacgca acactttagc ggcgaccagc
      361 gtctcgggcc gccgttcgag cacggcacgc acggcatgca gcccatagac ttgctgatgc
      421 cggctagcca cgccgccgcc ggccgcgccg cggctgcggc gctgcgtcgt cgcgttcgac
      481 cgggacgaag tcgaccttgc gctcctcgac gttgaccgcg acgagcttga ccttgatcga
      541 ctccatcaac cggtaggcgt tgcccgagcg ctcacccgtc aacgacgtgc cggtcggatc
      601 acggtggtag tagtcgcgcg gcaacgccgt cacgtgcacg agcccatcgg cctggatctc
      661 gggcaagcgc acgaacagcc cgaacggcac gacgctgctg atgaccacgt cgaacgtctc
      721 gcccactcgt tccttgagat atacgcactt caagcgctcg gcgacttcgc gagtggcctc
      781 gtcggcgcgc cgctcggtgc tcgagcagtg catgccgagc tgctccatct cttccatgcc
      841 gtaacgaaag cccttcggcg aacgcttgcc gttcaaccat ttgagcgcgc gatgcacgag
      901 cagatccggg tagcggcgaa tcggcgacgt gaaatgcgca taggcgccga gcgcgagacc
      961 gaagtgcccg acgttgccgg gctgatagcg cgcctggctc atcgagcgca gcacgacggt
     1021 ctcgacgagc tcctcctcgg gtctgccctg cacgctctcg atgattcgat tgaggtcctt
     1081 cggcgacacc ttgtgtggcg tgagcttgtg gccgaacgtg cgcaagaaca acaagagctc
     1141 ttcgagcttc gcctcgtcag gcccctcgtg cacgcggtac aacgtcggca ggcggccttt
     1201 ctggatccgt tttgcggctt cgacgttcgc cgcgatcatg cattcctcga tgatcttgtg
     1261 tgtaacgagg cgctcggcgg cgcgcacgtt cttgacctgc ccccgctcat cgagctcgat
     1321 cttcgtctcc ggcaagtcga aatcgatcgc gccgcgccga cggcgccgcg ccgcgaaggc
     1381 gccgtacacg gcttcgaggt ccttcaaggc cggctgaagc ttcgcgtgct cgccgtgcgg
     1441 gtgaaccgtg gccaggatcg tggccgcttc cgtgtacgtg agccgcgctg cggaacgcat
     1501 caccgcgtcg tagaagcgcg aacgcgtcac ctcgccgccc ggcgagacct ccatctcgca
     1561 tacgacgcag agccggtcga cgtgcggctt caacgagcac aggccgttcg agagctcctc
     1621 ggggagcatc ggcacgacgc gatccggaaa gtacacggac gttccgcggc cgcgcgcttc
     1681 gcgatcgagc ggcgtgtcgt gcggcacgta gtggctgacg tccgcgatgg cgacgagcac
     1741 gcgccaccct tcgccgtgcg cctcgcaata gacggc
//
LOCUS       DATCUD010000318         1884 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59754, whole genome shotgun sequence.
ACCESSION   DATCUD010000318 DATCUD010000000
VERSION     DATCUD010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59754"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VIQ99_04590"
     CDS             <1..468
                     /locus_tag="VIQ99_04590"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002614546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY9182454.1"
                     /translation="QRMQSFVLDPKTNPFNVLTPGQRPRATLSPSMALRDGEPFLSFA
                     VQGGDAQDQNLLQFFLNIVEFRMSVQQAVEAANVNSYQMLDSFGDHASEPGRLIVRSD
                     TPSWVQAELQRMGYRVEAWELTSGPINAILIDRAHGSLWGGSSDFGEDHGIAW"
     gene            564..1019
                     /locus_tag="VIQ99_04595"
     CDS             564..1019
                     /locus_tag="VIQ99_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182455.1"
                     /translation="MQGTWVGVLVAESLWGYPLLETIHTIGMAMLIGALGLVNLRVLG
                     YKPELPLIGTRDLLPLAWAGFTLNAISGSLLFTSDAVYFFESYTFRIKIVLIVLAGIN
                     AALLGRRVFREAAGAPPVSVDTGTKWIAATSLVFWIAAVCAGRLIAYLP"
     gene            1079..1552
                     /locus_tag="VIQ99_04600"
     CDS             1079..1552
                     /locus_tag="VIQ99_04600"
                     /inference="COORDINATES: protein motif:HMM:NF042488.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEY9182456.1"
                     /translation="MEFLAWLETTAIANAIRTVPWLYPAIETVHYIGLSFLVGGIMLI
                     DLRVLGLARSLPLKSMIGLLPFVWAGFIINVVTGSLLFIYGATNFGPNTAFQIKMGFM
                     LLAGLNALAFDLTVRRSGGEWVASDRPPTLAKSLATLSLVFWLCVVTTGRWMAYL"
     gene            1592..>1884
                     /locus_tag="VIQ99_04605"
     CDS             1592..>1884
                     /locus_tag="VIQ99_04605"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEY9182457.1"
                     /translation="MSTSDAIRPRYTIHDGFRMPMGFPVAGFDSGQRYRAAAGDIFVA
                     SYPKCGTTWTQYIVYLLLNGGHPLGPGQSINDVFPHLEEVGEDVVRALPEPRL"
BASE COUNT          279 a          599 c          629 g          377 t
ORIGIN      
        1 cagcgaatgc aaagcttcgt gctcgatccg aagacgaatc cattcaacgt gctgacgccg
       61 ggccagcgcc cacgcgcgac gttgagcccg agcatggcgt tgcgcgacgg tgagccgttc
      121 ttgtcgtttg cggtgcaggg cggcgatgcg caggaccaga acctgctcca gttcttcttg
      181 aacatcgtgg agttcaggat gagcgtgcag caggcggtcg aggccgcgaa cgtgaacagc
      241 taccagatgc tggactcgtt cggcgaccat gcgtcggagc cgggccggct gatcgtgcgc
      301 agcgacacgc cgtcgtgggt gcaggccgag ttgcagcgca tgggttatcg cgtcgaagcc
      361 tgggagctga cgtcaggccc catcaacgcg atcctgatcg atcgcgccca cggctcgctg
      421 tggggcggct ccagcgattt cggcgaggat cacggcatcg cctggtagcg cggagtttcc
      481 gaacctccct gtaggagccc cggttcgcta caatcctgcc cgcatcgcgg gtgatggggg
      541 tccggatggg ttttttggag tggttgcagg gcacgtgggt cggcgtgctc gtcgccgagt
      601 cgctctgggg atacccgctg ctcgagacga tccacacgat cggcatggcg atgctgatcg
      661 gggctctcgg cctcgtcaat ctgcgcgtgc tcggctacaa gccggagctg ccgttgatcg
      721 gcacgcgcga cctgctgccg ctcgcatggg ccggtttcac gctgaatgcg atcagcggct
      781 cgctgctgtt cacgtccgac gccgtctact tcttcgagag ctacacgttc cggatcaaga
      841 tcgtgttgat cgttctggcc ggaatcaacg cggccttgct cggccggcgg gtctttcgcg
      901 aggcggcagg cgcgcccccc gtgtcggtcg ataccggcac caaatggatc gcggccacct
      961 ccctggtttt ctggattgcc gcggtgtgcg ccggtcggct catcgcgtat ttgccgtgat
     1021 gcccgtggtc accgacgcac gcaggatccg cattcgctaa cggggccgag ggtcacgcat
     1081 ggagtttctc gcctggttgg aaaccactgc aatcgcgaac gcgatccgca ccgtcccgtg
     1141 gctgtacccc gcgatcgaga cggtgcacta catcggtctg tcgttcctcg tcggcggcat
     1201 catgctgatc gacctgcgcg tgctcgggct ggcgcgcagc ttgcccctca agagcatgat
     1261 cggcctgctg ccgttcgtgt gggccggctt catcatcaac gtcgtcacgg gctcgttgct
     1321 gttcatctac ggcgccacga acttcggccc gaataccgcg ttccagatca agatgggctt
     1381 catgctgctg gccgggttga acgcgttggc gttcgatctc acggtccgtc gttccggcgg
     1441 cgagtgggtc gcgtcggatc ggccgccgac gctagcgaag agtctcgcca cgttgtcgct
     1501 cgtgttctgg ctctgtgtcg tgacgaccgg ccgctggatg gcgtatctct gacggcggcc
     1561 cgctgcgcct gagcaacgcg ggagcgaagc cgtgagcacc tccgacgcca tccgcccgcg
     1621 ctacaccatt cacgacggat ttcggatgcc gatggggttt cccgtcgcgg gcttcgactc
     1681 ggggcagcgt tatcgcgccg cggccggcga catcttcgtc gcgtcgtatc cgaaatgcgg
     1741 cacgacgtgg acgcagtaca tcgtgtacct gttgctgaac ggcgggcacc cgctcggacc
     1801 gggtcagagc atcaacgacg tgtttccgca cctcgaggag gtcggcgagg acgtcgtgcg
     1861 cgctctgccc gagccgcgcc tgat
//
LOCUS       DATCUD010000319         1718 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31595, whole genome shotgun sequence.
ACCESSION   DATCUD010000319 DATCUD010000000
VERSION     DATCUD010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1718
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31595"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1364)
                     /locus_tag="VIQ99_04610"
     CDS             complement(<1..1364)
                     /locus_tag="VIQ99_04610"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY9182458.1"
                     /translation="MKILLVEDDADDADFLRVSLAQHNGSVYITRTARVGDAVAKLGD
                     DEFDVVLLDLHLPDASGAECVERIQQADSVIPIVVLSGHSDEDYAVEILNRGVQDYLV
                     KWEGDGRIILRAIRYAIERKRAELKLNYLARYDSLTAIPNRQHLRDQLDQGTTRAVRR
                     GRTMALLLLDLDRFKTVNETLGHEAGDMLLKEAVQRLGGSIREGDVLARLGGDEFAVL
                     LEDVEDLREVETVARSINDSLQKPFYVAGRQASVTVSVGITVCPADGTDPVALLNNAD
                     IAMYQAKEQGRNTFKFFTPSMHEEILAHHRLEADLKNAITRGEFELLYQPQLRLADHR
                     IDAVEALLRWRHPERGRLDPGEFISVAEESGHIVPLGIWVIEEVCRQLQRWESAGVPL
                     PRVAINVSAVQFRQPGFHETVRGVLESHSVDPGLIELELTENSLMEDTDGTRACLRAL
                     KQIGV"
     gene            complement(1505..>1718)
                     /locus_tag="VIQ99_04615"
     CDS             complement(1505..>1718)
                     /locus_tag="VIQ99_04615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182459.1"
                     /translation="YHSYGDLGPAQSNRSHVVERFRLSADGLTLDYEITVTDPVMLRE
                     PWLWGGSFIYREGANIRPWDCGAERA"
BASE COUNT          292 a          534 c          559 g          333 t
ORIGIN      
        1 actccgatct gcttcaaggc gcgcaggcag gcacgcgtgc cgtcggtgtc ctccatcaac
       61 gagttctcgg tcaactcgag ctcgatgagc cccggatcga ccgaatgaga ctcgaggaca
      121 ccgcgaaccg tttcatgaaa gccgggctgg cggaattgca ccgcagaaac gttgatcgcg
      181 actcgcggta gcggcacgcc cgcgctttcc cagcgttgga gctgccggca gacctcctcg
      241 atgacccaga tgcccaacgg gacgatgtgg ccgctttcct cggccacgga gatgaattcg
      301 ccggggtcca ggcgtccccg ttccgggtgt ctccagcgca gcaacgcctc cacagcgtcg
      361 atgcggtgat ccgcgagtcg gagctgcggt tggtagagca gctcgaactc accgcgcgtg
      421 atcgcgttct tgagatcggc ttcgagacga tgatgggcga gaatctcctc gtgcatgctg
      481 ggcgtgaaga acttgaaggt gttgcgtcct tgttctttcg cctggtacat ggcgatgtcg
      541 gcgttgttca gcaacgcgac cggatccgtg ccgtccgccg ggcacaccgt gatgccgacg
      601 ctcacggtca cggaggcttg tcgcccagcc acgtagaacg gcttttggag agagtcgttg
      661 atgctgcgcg ctaccgtctc gacctcgcgt aggtcctcga cgtcttcgag caggacggcg
      721 aactcgtcgc cgccgagccg ggccagcacg tcgccttcac gaatgcttcc gccgagacgt
      781 tgcacggcct ccttcaggag catgtcgccg gcctcgtgtc cgagcgtttc gttgaccgtc
      841 ttgaagcggt cgagatccag gagcagcagc gccatcgtgc gaccgcggcg aaccgcgcgt
      901 gtcgtcccct ggtcgagctg gtcacgcagg tgctgccggt tcggaatcgc ggtcagggag
      961 tcgtagcgcg ccaagtagtt gagcttgagc tccgcgcgct tgcgctcgat cgcgtagcgg
     1021 atcgcgcgaa ggatgatgcg tccgtcgcct tcccacttca cgaggtagtc ttggacgccg
     1081 cggttcagga tctcgacggc atagtcttcg tcgctgtggc cgctgagcac gacgatcggt
     1141 atcacactat cggcttgttg gattctttcg acgcactccg ccccagaagc atcgggcagg
     1201 tgcagatcca gcaacacgac gtcgaactcg tcgtcgccga gcttggccac agcatcgccg
     1261 acacgtgccg tgcgcgtgat gtagacggag ccgttgtgct gcgccaacga tacgcgcagg
     1321 aaatcggcgt cgtcggcgtc gtcctcgacg agcagaatct tcatgtaaga ccgctacgtc
     1381 ccccgacgtg tcttgcggtg gtagcgaaac taacagagcg accttggggg ccttagtgcg
     1441 cacatcacag aatgcgcttc catgagttgg aggatctggc agcgttcggc ggtcgcgcgt
     1501 cggttcaggc gcgctcggcg ccgcagtccc agggcctgat gtttgcgccc tcgcggtaga
     1561 tgaacgagcc gccccagagc catggctcgc ggagcatcac gggatcggtg acggtgatct
     1621 cgtagtcgag cgtcaggccg tcggccgaga gccggaagcg ctcgacgacg tggctcctat
     1681 tgctttgcgc gggaccgaga tcgccatagc tgtggtaa
//
LOCUS       DATCUD010000320         4915 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102482, whole genome shotgun sequence.
ACCESSION   DATCUD010000320 DATCUD010000000
VERSION     DATCUD010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4915
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102482"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VIQ99_04620"
     CDS             complement(<1..833)
                     /locus_tag="VIQ99_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012375057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HEY9182460.1"
                     /translation="MAAPLSKPTVERERHTLNGWLALVLVVLWFIAAITLFVTTISQI
                     DGDVPQPAFLIARLLTFVLMMALGIFSCFGFFTLEPNEARVLILFGAYKGTVRSSGFH
                     WANPLYARHRGVVPGTVPTPKKVKLGPLSVQDGTMTQPKLKTKLSLRVHNFNSDTLKV
                     NDKRGNPVEIAAVIVWRVEDTAQAVFDVEDYESYVQVQSESAIRSIASLYAYDHGEEH
                     ELTLRGGGDEVAHALKKELEVRLIKAGVVVEEARLTHLAYAPEIAQAMLRRQQADAVI
                     AA"
     gene            complement(951..1358)
                     /locus_tag="VIQ99_04625"
     CDS             complement(951..1358)
                     /locus_tag="VIQ99_04625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182461.1"
                     /translation="MKASHAALGAAVAANVLGWVLPAAADLRGFEAFRSSLSPLWSFD
                     RFADQPLWLLVLIVGSALTNVLFVVLAVQLLRGRGSKLVLRAAAAATLLDLHWVFTME
                     ADRRYLASGYFIWVSSFALLTLAAFLEARPARR"
     gene            complement(1372..2769)
                     /locus_tag="VIQ99_04630"
     CDS             complement(1372..2769)
                     /locus_tag="VIQ99_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HEY9182462.1"
                     /translation="MAQSAASSAVNLAALDLEHVFHPNTNLAALHRGTPLVLVRGKGV
                     HVWDDRGKQYIEAMAGLWCTTLGYGDEELARTAYEQIKRLSFSHLFTGKSHEPGILLA
                     DKLVRMAPFAASRAFFGNSGSDANDTQIKLVWYYNNAIGRPKKKKIIARQKGYHGTTL
                     AAAGLTGLPSFHKLFDVPLPPLLHTDAAYYYRGAAPGESEEDYATRLAARLDELIQRE
                     GPDTVAAFIAEPLMGVGGVLLPPRTYFPKIQAVLAKHDVLMIDDEVITGFGRTGEIWG
                     AQAFEMRPHTLTAAKALSSAYLPISAVVVPKFLYEPMIEASGEVGLFGHGFTYSGHPV
                     AAAVALRALAIYEERGLYEHVRAIAPQFQARLAALASHPLVGDTRGVGLVGACELVKD
                     EATKAALEAKLAVGAKCMQLCQEHGLIVRAIGDVIALCPPFIVTPNQIDEIFTKLARG
                     LDDTLAWAKRERLAP"
     gene            complement(2848..>4915)
                     /locus_tag="VIQ99_04635"
     CDS             complement(2848..>4915)
                     /locus_tag="VIQ99_04635"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9182463.1"
                     /translation="VLKALEELRVPVDRIAGTSIGAIVGGFYVSGMSVAGLEQLVESL
                     EWEEAFLNVTPRRLKSFRRKRDDDLFLVDLKPGLNNGEFELPVGLVQGQVIDTIIARE
                     TVRVARVHDFDDLAIPFRAIAGDLATGEAVVLESGNLARAIRASMSIPAALSPVRIDG
                     RLLVDGGIAMNLPVEVARDMGAERVIAVDISSTLLNEETLRSVVDVTSQLTNLLTRGG
                     TVEQREKLTPEDVLLTPQFAEDLGSADFERMHEAIQAGYDAAMQRREEFESFALGEAE
                     YAAHLAARKDPRLRDLPVIDFVSIQNDAPIAESVVRARLGDIELGRPLDIDAVERAVN
                     TVYGLEYYQNVRYTLVDDGDRTGLDLELDERSWGPNYLQLGMEYSSAANEDVLFGLAA
                     SYLRTAINPLGGEWRATLVVGDEPAFVSDLHQPFGPKGLYFFAPSLNIESNRFNVFEG
                     EERVTEAQLREATLELAVGRELLTWAEYRFGLRAAEGSFEVRVGDPTYVSEETFRRGE
                     FFGRFAVDTMDSVAFPRSGSLASVEWRASRQEPLAAEADFDQILVEGVHAKTWGRHTV
                     LTTLRYDATISGEAADSRLFRMGGFLDLSGINRNQLSGEHAARVGVSYYRRIGDLALF
                     PAFAGVSAELGNVWGSRDDISASGSILGGSFWAGIRTPVGPIYVAYGRAEGGLHAFYI
                     TLGRVF"
BASE COUNT          863 a         1679 c         1581 g          792 t
ORIGIN      
        1 gcggcgatca cggcgtcggc ctgctggcgc cgcagcatcg cctgcgcgat ttcgggcgca
       61 tacgcgaggt gcgtgagcct ggcttcctcg acgacgactc cggccttgat caaccgcacc
      121 tcgagctcct tcttcagcgc atgcgcgacc tcgtcgcctc cgccgcgcag cgtgagctcg
      181 tgctcctccc cgtggtcgta tgcgtacagg ctcgcgatgc tgcgaatcgc ggactcgctc
      241 tggacctgca cgtagctctc gtagtcctcg acgtcgaaca cggcctgtgc cgtatcctcg
      301 acgcgccaca cgatgacggc cgcgatctcg accgggttgc cgcgcttgtc gttcaccttc
      361 agcgtgtcgc tgttgaagtt gtgcacgcgc agcgagagtt tggtcttcag cttcggctgc
      421 gtcatcgtgc cgtcctgcac cgacagcgga ccgagcttca ccttcttcgg cgtcggcact
      481 gtgcccggca cgacgccgcg gtgccgcgcg tacagcggat tcgcccagtg gaatccgctg
      541 ctgcggaccg ttcccttgta agcgccgaac aaaatcagca cccgggcctc gttcggctcg
      601 agcgtgaaaa acccgaagca ggagaagata ccgagcgcca tcatcagcac gaaggtcagg
      661 aggcgtgcga tgagaaaggc gggctgcgga acgtcaccgt cgatctggct gatcgtggtg
      721 acgaagagcg tgattgcagc gatgaaccac aggacgacga gcaccagcgc gagccagcca
      781 ttcaacgtgt gtcgctcacg ttcgacggtg ggtttggaca gtggggcggc catggatcgc
      841 acctctcgtg ggttgatatg aaaatgatat caccacgaaa tcaccgagcg cgtcaagccg
      901 gccgcgaccc gaggcctgga atcccgtggg agccgtgagc gcgatttgac ctaacgccgg
      961 gccggcctgg cctcgagaaa cgcggccaag gtcagcaacg cgaacgagct gacccaaatg
     1021 aaataaccgc tcgcgagata gcggcggtcg gcttccatcg tgaacaccca atgcagatcg
     1081 agcagcgtcg cggccgcggc ggcccgcagc acgagcttag aaccgcggcc ccgcaagagc
     1141 tgcaccgcga gcacgacgaa caacacgttc gtgagggcgc tgccgacgat cagcaccaac
     1201 aaccagagcg gctgatccgc gaaccggtcg aacgaccaga gcgggctcag cgacgaacgg
     1261 aacgcttcga agccgcggag atcggcggcg gcgggcaaca cccatccgag cacgttggcc
     1321 gcgacggccg cgccgagcgc cgcgtgggac gctttcattc cggcctgccg ttcacggcgc
     1381 gaggcgttcg cgcttggccc acgcgagcgt gtcgtcgagc ccgcgcgcga gcttcgtgaa
     1441 gatctcgtcg atttgattcg gcgtcacgat gaacggcggg cacaacgcga tcacgtcgcc
     1501 gatcgcacgc acgatcaggc cgtgctcctg acagagctgc atgcacttcg cgccgacggc
     1561 gagcttcgcc tctaacgcgg ccttcgtcgc ctcgtctttg acgagctcac acgcgccgac
     1621 gaggccgacc ccgcgcgtgt cacccacgag cggatgcgag gccagcgccg cgagccgcgc
     1681 ctggaattgc ggagcgatcg ctcggacgtg ctcgtacagg ccgcgctcct cgtagatcgc
     1741 gagcgcgcgc aacgcgacgg ccgccgcgac cggatgcccc gagtacgtga agccgtgacc
     1801 gaacaaaccg acctcgccgc tcgcctcgat catcggctcg tacaggaatt tgggcacgac
     1861 gaccgcgctg atcggcaggt acgccgacga caacgctttg gccgccgtca gcgtgtgcgg
     1921 ccgcatctcg aacgcctgcg cgccccagat ctcgcccgtg cgcccgaagc ccgtgatcac
     1981 ctcgtcgtcg atcatgagca cgtcgtgctt cgcgagcacc gcttggatct tcgggaagta
     2041 cgtgcggggc ggcagcagca cgccgccgac gcccatcagc ggctccgcga tgaacgccgc
     2101 gaccgtgtcc gggccctcgc gctgaatcag ctcgtcgagc cgcgccgcga gtcgcgtcgc
     2161 gtaatcctct tcgctctcgc cgggcgccgc accgcggtaa tagtaagcag cgtcggtatg
     2221 caggagcggc ggtaacggca cgtcgaacag cttgtggaac gacggaagcc ccgtgagtcc
     2281 ggccgccgcg agcgtggtgc cgtgatagcc cttctgccgc gcgatgatct tctttttctt
     2341 cgggcgcccg atcgcgttgt tgtagtacca gacgagcttg atctgcgtgt cgttggcgtc
     2401 cgagcccgag ttgccgaaga acgctcgcga cgcggcgaat ggcgccatgc gcaccagctt
     2461 gtcggccaac aggatcccgg gctcgtggct cttgccggtg aagagatgcg agaaagacag
     2521 ccgtttgatt tgctcgtagg ccgtgcgcgc gagctcctcg tctccgtagc cgagcgtcgt
     2581 gcaccagagt ccggccatcg cttcgatgta ctgcttgccg cggtcgtccc acacgtgcac
     2641 gcccttgccg cgcacgagca cgagcggcgt accgcggtgc agcgcggcca agttcgtgtt
     2701 cggatggaac acgtgctcca agtccaatgc agcgaggttc acggcggatg aagcggccga
     2761 ctgtgccatg gcagacccta acgttttccg gggcggcaga tcatacaccg cgatgcgccg
     2821 cactcacgcc gcaccgatgt cgacgcgtca gaagactcgg ccgagcgtga tgtagaacgc
     2881 atggaggccg ccttcggcgc ggccgtacgc gacatagatc gggcccacgg gcgtccggat
     2941 gccggcccag aacgacccgc cgagaatgct gcccgatgcc gagatgtcgt cgcgagagcc
     3001 ccagacgttg ccgagctcgg cgctgacacc cgcgaacgcc ggaaacagcg cgagatcgcc
     3061 gatccggcgg taatagctca caccgacccg cgccgcgtgc tcacccgaca gctggttgcg
     3121 gttgatgccc gacaggtcga ggaatccgcc catccggaac agccggctgt cggcggcctc
     3181 gccgctgatc gtcgcgtcgt agcgcagcgt cgtgagcacc gtgtggcggc cccaagtctt
     3241 cgcgtgcacg ccctcgacca agatctgatc gaagtcggct tccgcggcga gcggttcctg
     3301 gcgtgaagcg cgccattcga cgctcgcgag cgacccggac cgcgggaatg ccacgctgtc
     3361 catcgtatcg accgcaaagc gaccgaagaa ctcaccgcgg cggaaggttt cctccgagac
     3421 gtacgtcgga tcgccgacgc ggacctcgaa cgagccctcc gcggcgcgga gcccgaaccg
     3481 gtactcggcc catgtcagga gctcgcggcc gaccgcaagc tccaacgtcg cctcgcgcag
     3541 ctgtgcctcc gtgacgcgct cctcgccttc gaacacgtta aagcgattcg attcgatgtt
     3601 cagggagggc gcgaagaagt acagcccctt cggtccgaac ggctgatgca ggtcgctgac
     3661 gaacgccggc tcgtcgccga cgacgagcgt ggcgcgccat tcgccgccga gcggattgat
     3721 cgcagtgcgc aagtagctcg ccgcgagccc gaacaacacg tcctcgttcg cggccgagct
     3781 gtactccatg ccgagctgca ggtagttcgg tccccacgag cgctcgtcga gctccagatc
     3841 gaggccggtg cgatcgccgt cgtcgacgag cgtgtagcgc acgttctggt agtactcgag
     3901 cccgtagacg gtattgaccg cgcgctcgac cgcgtcgatg tcgaggggcc ggccgagctc
     3961 gatgtcgccg aggcgcgccc ggacgacgct ctcggcgatc ggcgcgtcat tttggatgct
     4021 cacgaagtcg atgaccggca agtcgcgtag ccgcggatcc ttgcgcgcag ccagatgggc
     4081 cgcgtactcg gcctcgccga gcgcgaagct ctcgaactcc tccctcctct gcatggctgc
     4141 gtcgtaaccg gcctgaatgg cctcgtgcat gcgctcgaaa tccgcggagc cgagatcctc
     4201 cgcgaactgc ggggtcagca gcacgtcctc gggtgtgagc ttctcgcgct gctccacggt
     4261 gccgccgcgg gtcagcaagt tcgtgagctg ggacgtcacg tcgacgaccg atcgcaacgt
     4321 ttcctcgttg agcagagtcg acgagatgtc caccgcgatc acgcgttccg cacccatgtc
     4381 gcgcgccact tccaccggca gattcatcgc tatgccgcca tcgaccagca ggcggccatc
     4441 gatccggacg ggggacagag cggccggaat cgacatgctc gcgcgaatcg cgcgcgccag
     4501 gttgcccgac tcgagcacga cggcctcgcc cgtcgcgaga tcaccggcga tcgcccgaaa
     4561 cgggatcgcg agatcgtcga aatcgtgtac tcgagcgacg cgcacggtct cgcgcgcgat
     4621 gatcgtatcg atgacttggc cctgcacgag ccctaccgga agctcgaact cgccgttgtt
     4681 gagccccggc ttcaggtcga cgagaaacag gtcgtcgtcg cgtttgcggc ggaacgactt
     4741 caagcgtcgc ggagtgacgt tcaggaatgc ctcctcccac tccaggcttt cgacgagctg
     4801 ctcgagaccc gcgacgctca tcccggaaac gtagaaaccg ccgacgatcg cgccgatgct
     4861 cgtgccggcg atgcgatcga ccggcacgcg cagctcctcg agcgccttca gaaca
//
LOCUS       DATCUD010000321         1509 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67187, whole genome shotgun sequence.
ACCESSION   DATCUD010000321 DATCUD010000000
VERSION     DATCUD010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67187"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1095)
                     /gene="prpC"
                     /locus_tag="VIQ99_04640"
     CDS             complement(<1..1095)
                     /gene="prpC"
                     /locus_tag="VIQ99_04640"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016448407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEY9182464.1"
                     /translation="MIENSSGAPRKKSVALSGVTAGNTALCTVGRTGNDLHYRGYDIL
                     EVAEACEFEEIAHLLVHEELPTAPQLSAYRAKLRSLRGLPEQVRRVLEALPASSHPMD
                     VMRTGVSALGCVEPERDQSPAHAREIADRLIASLGSMLLYWHHYSRTGVRIDVESDAD
                     SVGAHFLDRLHLKPPPASWVRAMHTSLVLYAEHEFNASTFTARVIAGTGTDLYSCIAG
                     AIGALRGPKHGGANEVALEIQQRYRTPEEAVADIRARVGRKELVIGFGHPVYTVADPR
                     NRIIKEVARRLSAEAGAMNGFAIADAIEAEMAALKKMFANLDWFSAVAYHVMGVPTAM
                     FTPLFVIARTTGWAAHVIEQRADGKIIRPSA"
     gene            complement(1166..>1509)
                     /locus_tag="VIQ99_04645"
     CDS             complement(1166..>1509)
                     /locus_tag="VIQ99_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007224508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182465.1"
                     /translation="HSFAAEFDANKPVTLEGTVTKMEWINPHSWIHIDVTTASGEVQK
                     WMVEGGAPNALLRRGWNRNSLPAGTKIKVQGFQAKDGSFRANGRDITFEDGSKLFVGS
                     SGIGAPDERPE"
BASE COUNT          242 a          504 c          492 g          271 t
ORIGIN      
        1 cgcgctcggc cggatgatct tgccgtccgc gcgctgctcg atcacgtggg cggcccagcc
       61 cgtggtccgc gcgatcacga acagcggagt gaacatcgcc gtgggcacgc ccatgacgtg
      121 atacgcgacg gccgagaacc aatcgaggtt cgcgaacatc ttcttcagcg ccgccatctc
      181 cgcttcgatc gcatcggcga tcgcgaagcc attcatggca ccggcctcgg cggacaggcg
      241 ccgcgcgacc tccttgatga tccggttgcg ggggtcggcc accgtgtaca cgggatgacc
      301 gaacccgatc acgagttcct tacgtcccac gcgtgcgcgg atgtcggcga cggcttcctc
      361 gggcgttcga tagcgctgct ggatctcgag cgcgacctcg ttcgcgccgc cgtgcttcgg
      421 accgcgcaac gcgccaatgg ctcccgcgat gcacgaatag agatccgtgc ccgtgccggc
      481 gatcacgcgt gccgtgaacg tcgaagcatt gaactcgtgc tcggcgtaca acacgagcga
      541 cgtgtgcatc gcccggaccc aagacgcggg cggcggcttc aggtgcagtc ggtccaggaa
      601 atgcgcgccg accgagtccg cgtccgattc gacgtcgatc ctgacgcccg tccgcgagta
      661 gtggtgccag tacagcagca tgctgcccag cgaagcgatg agccggtccg cgatctctcg
      721 ggcgtgcgcc ggcgattggt cgcgctcggg ctccacgcac ccgagcgccg atacgccggt
      781 ccgcatcacg tccatcgggt gcgacgacgc cggcagggct tcgagcactc gtcgaacttg
      841 ttccggtaac cctctgagag atctcagctt agctcgatac gcggacagct gtggggcggt
      901 cggcagctcc tcatgaacca gcaggtgggc gatctcctcg aactcgcagg cctcggctac
      961 ttcgaggatg tcgtagccgc gatagtgcag gtcgttgccg gtgcgcccga cggtgcacag
     1021 cgcggtgttg cccgcggtca cgcccgagag cgcgacggac ttcttgcgcg gtgcgccgga
     1081 cgagttttcg atcatcgtgg ttcccaaaaa gcgaaagccg cgactgaagc gtcgcggctt
     1141 tcgatgttac gcgattacag cgcgactatt cgggtctttc gtcgggtgcg ccgatgccgg
     1201 acgagccgac gaacagcttc gacccgtctt cgaacgtgat gtcgcggccg ttggcgcgaa
     1261 acgagccgtc cttcgcctgg aagccctgca ccttgatctt ggtgccggcc ggcagcgagt
     1321 tgcggttcca gccgcgccgc agcagcgcgt tcggcgcgcc gccctcgacc atccacttct
     1381 ggacctcgcc ggacgccgtc gtgacgtcga tgtgaatcca cgagtgcggg ttgatccact
     1441 ccatcttcgt cacggtgccc tcgagcgtga cgggcttgtt ggcgtcgaac tctgccgcga
     1501 aagagtgat
//
LOCUS       DATCUD010000322         1520 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102493, whole genome shotgun sequence.
ACCESSION   DATCUD010000322 DATCUD010000000
VERSION     DATCUD010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102493"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VIQ99_04650"
     CDS             <1..286
                     /locus_tag="VIQ99_04650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182466.1"
                     /translation="ELPFLTMSGIVDNDKVHLPGTMPFFVRKGYSGVLPAGTPYAQIL
                     PFKREHWESEVDVSLSHAEMSAKNKANSAKFRQPDGGVYVREVWERRKYT"
     gene            286..1026
                     /locus_tag="VIQ99_04655"
     CDS             286..1026
                     /locus_tag="VIQ99_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182467.1"
                     /translation="MDTKKIKFVANRPWLTEQSASRPEPIAATIPEWYRQADRYAKDP
                     ATGQYSELPQIGGKVPTWKACPAVFDILGSGYTYKTPCDIEFLEDATGDIHARVLDPG
                     HPNFLLDREPLQQFVVPAGYHAKHFAWWADWAVELPEGYSALYVHPLNRFELPFITTS
                     GIVDNDKDRLPGTMPFFFLKGITGILPAGTPYAQIIPFKREHWQSEVDASLTLEEMEV
                     KNKANSAKFRRPDGGVYLREVWERRNYR"
     gene            1093..>1520
                     /locus_tag="VIQ99_04660"
     CDS             1093..>1520
                     /locus_tag="VIQ99_04660"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY9182468.1"
                     /translation="MKNVTITRVMTPAPATVEPTASVVEAERLMREHRCHHIPVIQAG
                     KVVGMLGTLDLMKALVLRPDAAEPDAEVLRRAPLRTRHVADVMQRNVRVLTQTATLFD
                     AARALAAGGFHALPVVAADGRLVGIVTSTDAMQALADDLQR"
BASE COUNT          280 a          506 c          487 g          247 t
ORIGIN      
        1 cgagctccct ttcttgacca tgagcggcat cgtcgacaac gacaaggtgc acttgcccgg
       61 caccatgccg ttcttcgtgc gcaagggcta ctcgggcgtt ctgcccgccg gcacgccgta
      121 cgcgcagatc ctgccgttca agagggagca ctgggaatcg gaggtggacg tctccttgtc
      181 gcacgcggag atgagcgcca agaacaaggc caacagcgcc aagttccgcc aacccgatgg
      241 cggcgtttac gttcgggaag tgtgggaacg aagaaagtac acgtgatgga cacgaagaag
      301 atcaagttcg tagcgaatag gccgtggttg accgagcaga gcgcctcgcg ccccgaaccc
      361 atcgcagcaa cgatccccga gtggtaccgg caggccgatc gctacgccaa ggacccggcc
      421 acgggccagt attcggagct gccgcagatc ggcggcaagg ttccgacgtg gaaggcctgc
      481 cccgcggtgt tcgacatcct cggcagcggc tacacctaca agacgccgtg cgacatcgag
      541 ttcttggagg atgcgacggg cgacatccac gcgcgcgtgc tcgaccccgg tcatccgaac
      601 tttctgctcg atcgcgagcc cttgcagcag ttcgtcgttc ccgccggcta tcacgccaag
      661 cacttcgcgt ggtgggccga ctgggcggta gagctgccgg aaggctacag cgcgctgtat
      721 gttcatccgc tcaaccgctt cgagctcccg ttcatcacga cgagcggcat cgtcgacaac
      781 gacaaggatc gcctgcccgg cacgatgccg tttttcttct tgaagggcat caccggcatc
      841 cttcccgccg gcacgcccta tgcgcaaatc attccgttca agcgcgagca ttggcagtcg
      901 gaggtggacg cctcgctgac gctcgaggaa atggaagtca agaacaaagc caacagcgcc
      961 aaattccgcc ggccggacgg cggggtttac ctgcgcgagg tttgggagcg aaggaactac
     1021 cggtaattgc gcgagtagcc gctgagacca cgctcacggt cgcgctccgc ggccgttgct
     1081 atcgtggctc gcatgaagaa cgtgacgatc acgcgcgtca tgacgccggc cccggccacg
     1141 gtcgagccca cggcgagcgt cgtcgaggcc gagcgcctca tgcgcgagca tcgttgccat
     1201 cacatccccg tgattcaggc cggcaaggtc gtgggcatgc tcggcacgct cgatctcatg
     1261 aaggcgctcg tgttgcgccc cgacgcggcc gagcccgacg cagaggtatt gcgccgcgcg
     1321 ccgctgcgca cgcgccacgt ggccgacgtc atgcagcgca acgtgcgcgt gttgacgcag
     1381 acggctacgc tgttcgacgc ggcgcgcgcg ctcgcggcgg gcggcttcca cgcgctaccg
     1441 gtcgtcgccg cggacggccg cctcgtcggc atcgtgacct cgaccgacgc gatgcaggcg
     1501 ctcgccgacg atctgcaacg
//
LOCUS       DATCUD010000323         2202 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67193, whole genome shotgun sequence.
ACCESSION   DATCUD010000323 DATCUD010000000
VERSION     DATCUD010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67193"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..558
                     /locus_tag="VIQ99_04665"
     CDS             <1..558
                     /locus_tag="VIQ99_04665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182469.1"
                     /translation="PAPHPTPKGALINDHYWTEQALAASPLEWTILRHHIYTDFLVGT
                     LATALKFGVLSNSAGDGGNAYVTRADCARADAAALASDFSGRRILDITGPAPVTPTEL
                     ARLASEISGKPLEYRALSRAEHEKMLAGVGLPPFLVTALADFDEAQSQGYLAIRSPAV
                     QALTGKAPQSVADFLKSQRAALTAA"
     gene            complement(555..1436)
                     /locus_tag="VIQ99_04670"
     CDS             complement(555..1436)
                     /locus_tag="VIQ99_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015495788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 5,10-methylenetetrahydrofolate
                     dehydrogenase/5,10-methenyltetrahydrofolate
                     cyclohydrolase"
                     /protein_id="HEY9182470.1"
                     /translation="MIDNRLIDGRAVRDRILETIAARVRAGAAKHTLGRLVSISIGEH
                     KEVAVYVRGQANAAKKVGIPFEDQTWPATLTQDECKARLRGMNDDASVLGVILQRPIP
                     KHLHGRSLASAIHPLKDIEGMNPASIGDIVYNDLALAPCTAAASVELIKATGLNLHGL
                     EVVMIGHSEIVGKPAAFMLMAEGATVTVCHHLTRSVAAHSRRADAVLVAVGKPRFLRA
                     DMVKPGAAVIDIGINQVTLPNGETAIVGDVDTDNVKEVASWVTPVPGGVGPVTVAMFM
                     RNAVTAHEKQLAAGWLR"
     gene            complement(1456..>2202)
                     /locus_tag="VIQ99_04675"
     CDS             complement(1456..>2202)
                     /locus_tag="VIQ99_04675"
                     /inference="COORDINATES: protein motif:HMM:NF016143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEY9182471.1"
                     /translation="VIVILGLVLVLGGPDAVMQLLSGGASVAPSGEQGRPLTTNDAES
                     DFVARVLGSTEDVWGSLFAEAGQSYQAPELALFAGAVQSACGSASAASGPFYCPGDRR
                     VYLDTSFFDDLARMGGPGDFAAAYVIGHEVGHHVQTLLGTSAEVRAAQQRSNEVEANR
                     IQVAMELQADCFAGVWAYHANQATPMLEPGDVEEGLGAAQAIGDDRLQRNAGRAVTPD
                     SFTHGSSADRQRWLSTGLRTGDPSACDTFN"
BASE COUNT          373 a          776 c          701 g          352 t
ORIGIN      
        1 ccggcgccgc atccgacgcc gaaaggtgcg ctgatcaacg accactactg gaccgagcag
       61 gcgctcgcag cgagcccgct cgagtggacg attctgcgcc atcacatcta cacggatttc
      121 ctcgtcggca cgctcgcgac cgcgttgaaa ttcggcgtgc tatctaactc tgccggcgac
      181 ggcggcaacg cctacgtcac ccgcgccgac tgcgcgcgcg ccgacgcggc cgcgctcgcg
      241 agcgacttca gcggccgacg catcctcgac atcacgggcc cggcgcccgt cacgccgacc
      301 gagctcgcgc ggctcgcgag cgagatctcc ggcaagccgc tcgagtatcg ggcactgtcg
      361 cgcgccgagc acgagaagat gctggccgga gtgggcctac cgccgttcct cgtgaccgcg
      421 ctcgcggact tcgacgaagc gcaatcgcag ggctacctcg cgatccgctc gccggccgtg
      481 caagcgctca cgggcaaagc accgcagtcc gttgctgatt tcttgaagag ccaacgcgca
      541 gcgttgacag cggcctagcg cagccagccc gccgcgagct gcttctcgtg cgcggtgacg
      601 gcattgcgca tgaacatcgc gacggtgacg ggaccgacgc cgcccggcac gggagtcacc
      661 cagctcgcga cttctttcac gttgtcggta tcgacgtcgc cgacgatggc ggtctcgccg
      721 ttcggcagcg tgacctggtt gatgccgatg tcgatgaccg cagcgcccgg cttcaccatg
      781 tcggcgcgta ggaaccgcgg cttgccgact gcaacgagca cggcatcggc gcggcgcgag
      841 tgcgcggcga ccgaacgcgt gaggtgatga catacggtca ccgtcgcgcc ttcagccatc
      901 aacatgaacg ccgcgggctt accgacgatc tcggagtgac cgatcatcac gacctcgagt
      961 ccatgcaggt tgagaccggt cgccttgatc agctcgaccg acgccgccgc ggtgcacggt
     1021 gccagcgcga gatcgttgta gacgatgtcg ccgatcgacg ctggattcat gccttcgatg
     1081 tccttgagcg gatgaatcgc cgacgcgagc gagcggccgt gcaaatgctt cgggatcggc
     1141 cgctgcaaaa ttacgccgag cacgctcgcg tcgtcgttca tcccgcgcaa gcgcgctttg
     1201 cactcgtctt gcgtcaacgt ggccggccaa gtctgatcct cgaacggaat gccgaccttc
     1261 ttcgctgcgt ttgcttgccc acgcacgtat acggcgactt ccttgtgctc gccgatgctg
     1321 atcgacacga gccgcccgag cgtgtgcttg gctgcgccgg cgcgcacgcg cgcagcgatg
     1381 gtctcgagaa tgcgatcgcg aacggctctg ccgtcgatga ggcggttgtc gatcattgag
     1441 tgcttccgag gaaggttaat tgaacgtatc gcacgccgac ggatcgcccg tgcgcaaacc
     1501 cgtgctgagc caccgctgcc gatcggcgga ggagccgtga gtgaacgagt ccggcgtcac
     1561 ggcgcgccca gcattgcgct gcaaccgatc gtcgccgatc gcctgagctg caccgagtcc
     1621 ctcttcgacg tcaccgggct cgagcatcgg cgtcgcctgg ttcgcgtggt aagcccatac
     1681 gccggcgaag caatcggcct gaagctccat cgccacctga atccgattcg cctcgacctc
     1741 gttgctgcgc tgctgcgcgg cccgcacctc ggccgaggta ccgagcaacg tctgcacgtg
     1801 gtgaccgacc tcgtgaccga tcacatacgc ggccgcgaag tcgccgggcc cgcccatgcg
     1861 cgcgagatcg tcgaagaacg acgtgtccaa gtacacgcgc cgatcgccgg ggcaatagaa
     1921 cggcccggac gccgcgctcg cggaaccgca cgccgactgc acagcacccg cgaacagcgc
     1981 aagctccggg gcttggtagc tctgcccggc ctccgcgaac aggctgcccc agacgtcctc
     2041 ggtgctgcca agcacgcgcg cgacgaaatc gctctccgcg tcgttcgtgg tcaacggcct
     2101 gccctgctcg ccgctgggtg ccacggacgc gccaccgctc aggagctgca tgacggcgtc
     2161 ggggccgccg agcaccagca cgagaccgag gatcacgatg ac
//
LOCUS       DATCUD010000324         2719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88397, whole genome shotgun sequence.
ACCESSION   DATCUD010000324 DATCUD010000000
VERSION     DATCUD010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88397"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..641
                     /locus_tag="VIQ99_04680"
     CDS             <1..641
                     /locus_tag="VIQ99_04680"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY9182472.1"
                     /translation="REPLFDVLATLAFDERRSAQFRAELHAALEIVDKGYASVEQMKS
                     SWAGALGVPQFTPSNVLELAVDHDRDGRIDLWSVGPDVIASVANYLRDTGWRNDQTWG
                     REVRLPAGGEEALSATEAEEPPPDAACERYRSLRGWRGLHDWQTLGVRRVDGRDLPAR
                     NLPAALIAGDPGDDHGYLVYRNFCSIMRYNPAFRYAISVGLLADAIAAEAPR"
     gene            638..1738
                     /locus_tag="VIQ99_04685"
     CDS             638..1738
                     /locus_tag="VIQ99_04685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009383353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY9182473.1"
                     /translation="MTATPDEWIDLGSVEELKSPARRVVTVADKPVALTFHGGRFGAV
                     SGICNHTGGPLGEGELDGDYLTCPWHYWKFHFATGEGEPGFEKDKVPSYALKEEGGRL
                     LIGATPVTRRHRLPHEPHPLARAVRREPGPLRVVGISTTVMTRKHPRYSGSEVLLEHA
                     LAHAAQRGAETKLIKLNELRFKACEGFYSKAARACTWPCSITQMDSKDELDRVYEAFV
                     YWADVVLIATPIRWGNASSLYHKMVERMNCIQNQVTIANRVLLKNKVVGFVIIGGQDN
                     VQAVAGQMMSFFSEVGCVFPQFPFIAHSRGWTAEDMEANVAALKKSDSLRQGAADLVD
                     RAMVLAKALLEGEGTDAKVLRAGRKAFDPASH"
     gene            complement(1743..>2719)
                     /locus_tag="VIQ99_04690"
     CDS             complement(1743..>2719)
                     /locus_tag="VIQ99_04690"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182474.1"
                     /translation="GNRLWRLHTVPGPGEPGSETWPTDESAARGGGGTWMTGSYDPEL
                     GLLYWGTGNPNPDFNGVDRLGDNLYTASLLAIEAETGKLRWHYQFTPHDTHDWDSNHV
                     PVLATLEWNGVDRRVVMVANRNGFFYVIDRVTGELLLGKPFTATTWAREIGADGRPIV
                     LNADGSGGCLPDTYGGTNFNPPSYDPRLRLFFVSARETCATFSSLPPVFTPGQVSVAG
                     VVWADRDQAFGALRAIDVFTGAVKWEFRVPQPNFAGVMTTASGLVFTGDQEGNFIALD
                     SASGEALWHYQTGASIWGAAAMTYMLDGRQQVLIPSGSVLFSFALPAN"
BASE COUNT          458 a          919 c          931 g          411 t
ORIGIN      
        1 tccgcgagcc gctgttcgac gtgctcgcga cgctggcatt cgacgagcgg cgcagcgcgc
       61 agtttcgcgc cgagctccac gccgcgctcg agatcgtgga caaaggctac gcgtccgtgg
      121 agcagatgaa gagctcgtgg gccggcgcgc tcggcgtgcc gcaattcacg ccgagcaacg
      181 tgctcgagct cgccgtcgac cacgatcgcg acggccgaat agatctctgg agcgtcgggc
      241 ccgacgtgat cgcctcggtc gcgaattact tgcgcgacac gggttggcgc aacgaccaaa
      301 cgtggggccg cgaggtgcgg ttgccggccg gcggcgagga ggcgctgtcc gcgaccgagg
      361 ccgaggagcc gcctcccgac gcggcgtgcg aacggtatcg gagcctgcgc ggctggcgcg
      421 ggctccatga ctggcagacg ctcggcgtgc gccgtgtcga cggccgcgat ctgcctgcgc
      481 gcaacctgcc cgcagccctg atcgccggcg accccggcga cgaccacggt tatctcgtct
      541 accgaaactt ctgctcgatc atgcgctaca acccggcgtt tcgttacgcc atctcggtgg
      601 gcctgttggc cgacgcgatc gcggcggagg caccgcggtg acggcgacgc ccgacgagtg
      661 gatcgacttg ggcagcgtcg aggagctcaa gagccccgcg cgccgcgtcg tgaccgttgc
      721 ggacaagccg gtcgcgctca cgttccacgg cggccgtttc ggcgccgtga gcggaatctg
      781 caaccacacc ggcggcccct tgggcgaagg cgagctcgac ggcgactacc tgacgtgccc
      841 atggcattac tggaagtttc acttcgcgac cggcgaaggc gagcccggat tcgagaagga
      901 caaggtccca agttacgcgc tcaaagagga aggcggccgc ttgctgatcg gcgcgacgcc
      961 cgtcacgcgc cggcaccgcc tgccgcacga gccccacccg ctcgcccgcg ccgtgcgacg
     1021 cgagccgggc ccgctccgag tcgtcggcat ctcgacgacg gtcatgactc gcaagcaccc
     1081 gcgctactcg ggcagcgaag tgctgctcga gcacgcgctc gcccatgcgg cgcagcgcgg
     1141 cgccgagacc aagctgatca agctcaacga gctccgcttc aaagcgtgcg agggcttcta
     1201 ctcgaaggcc gcgcgcgcgt gcacgtggcc gtgcagcatc acgcaaatgg actcgaagga
     1261 cgagctcgat cgcgtctacg aggcgttcgt ctactgggcc gacgtcgtgc tgatcgcgac
     1321 accgatccgc tggggtaacg cgagctcgct gtaccacaag atggtcgagc gcatgaactg
     1381 cattcagaac caggtcacga tcgcgaaccg cgtgttgctc aagaacaagg tcgtcggttt
     1441 cgtgatcatc ggcggccagg acaacgtgca agccgtcgcg ggccagatga tgagcttctt
     1501 cagcgaggtc ggctgcgtgt tcccgcaatt cccgttcatc gcccactcgc gcggctggac
     1561 cgccgaggac atggaagcga acgtcgcggc gctgaagaag tcggacagcc tgcggcaagg
     1621 cgccgcggat ctcgtcgacc gcgcgatggt gctggcaaag gcgctactcg aaggcgaagg
     1681 caccgatgcg aaggtcctgc gcgcaggtcg caaggccttc gatcccgcga gtcattgagc
     1741 gctcagttcg cgggcagcgc gaacgagaac agcacggagc ccgacgggat cagcacctgc
     1801 tgccggccgt cgagcatgta ggtcatcgcg gcggcgcccc agatcgaggc gccggtctgg
     1861 taatgccata gcgcctcgcc cgacgcggag tcgagcgcga tgaagttgcc ttcctggtcg
     1921 ccggtgaata cgaggcccga cgcggtcgtc atcacgccgg caaagttcgg ctgcggaaca
     1981 cggaactccc acttcacggc gcccgtgaac acgtcgatcg cgcgcaatgc gccgaatgct
     2041 tgatcgcgat ccgcccacac gacgccggcg accgacactt ggcccggcgt gaacacgggc
     2101 ggtaggctcg agaacgtcgc gcacgtctcg cgcgcactga cgaagaacag cctcaggcgc
     2161 gggtcgtacg acggcggatt gaagttcgtt ccgccgtatg tgtcgggcag gcagccgccg
     2221 ctgccgtcgg cattcagcac gatcggccgg ccgtcggcgc ctatctcgcg cgcccaggtc
     2281 gtggccgtga aaggcttgcc gagcaggagc tcgcccgtca cgcggtcgat cacgtagaag
     2341 aagccgttgc ggttcgcgac catcacgacg cgccggtcga cgccgttcca ctcgagcgtc
     2401 gcgagcaccg gcacgtggtt cgagtcccag tcgtgcgtgt cgtgcggcgt gaattggtaa
     2461 tgccagcgca gcttgcccgt ctcggcctcg atcgcgagca gcgacgccgt gtacaagttg
     2521 tcgccgaggc gatcgacacc gttgaagtct gggttcgggt tgccggtgcc ccagtacaac
     2581 aagccgagct cgggatcgta gctgcccgtc atccaggtac cgccgccgcc gcgcgccgca
     2641 gactcgtcgg tcggccacgt ctcgctgccg ggctcgccgg gccccggaac ggtgtggagg
     2701 cgccagaggc ggttgccgg
//
LOCUS       DATCUD010000325         7648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81294, whole genome shotgun sequence.
ACCESSION   DATCUD010000325 DATCUD010000000
VERSION     DATCUD010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 7648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7648
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81294"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1046
                     /gene="tuf"
                     /locus_tag="VIQ99_04695"
     CDS             <1..1046
                     /gene="tuf"
                     /locus_tag="VIQ99_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEY9182475.1"
                     /translation="IDKAPEEKARGITIATAHVEYESDARHYAHVDCPGHADYVKNMI
                     TGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVYMNKADMVDDKELLELVE
                     LEVRDLLTTYEFPGDKTPIVIGSALKALEGDTSPLGTPSVEKLVAEMDKYIPMPERLI
                     DGPFLMSIEDVFSISGRGTVVTGRIDRGIIKVGDEIEIVGIRPTQKTICTGVEMFRKL
                     LDEGRAGDNVGVLLRGTKREEVERGQVLAKPGSITPHTKFECEVYILTKEEGGRHTPF
                     FKGYRPQFYFRTTDVTGAVELPEATEMVMPGDNIQMKVELISPIAMEEGLRFAIREGG
                     RTVGAGVVAKIIQ"
     gene            1062..1137
                     /locus_tag="VIQ99_04700"
     tRNA            1062..1137
                     /locus_tag="VIQ99_04700"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1095..1097,aa:Trp,seq:cca)
     gene            1186..1566
                     /gene="secE"
                     /locus_tag="VIQ99_04705"
     CDS             1186..1566
                     /gene="secE"
                     /locus_tag="VIQ99_04705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEY9182476.1"
                     /translation="METRVEEQPTFVDTAKLALAIVVVLLGLVGYYYFAESSVLLRAL
                     SVIAALAIGAGVAFTSLQGRWLWKFIQGSRVELNKVVWPTREETLQTTLIVLVVALFG
                     GVFFWLLDLMLLWLTTRVTGQGGL"
     gene            1571..2104
                     /gene="nusG"
                     /locus_tag="VIQ99_04710"
     CDS             1571..2104
                     /gene="nusG"
                     /locus_tag="VIQ99_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019464004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEY9182477.1"
                     /translation="MALQWYVVHAYSNFEHKVKESLIERVRRAGLQDKFGEVLVPTEE
                     VVEMREGQRRKSERKFFPGYVLVQMEMDDETWHLVKEVPKVLGFIGGSSDKPAPITDK
                     EAQAILNRVQEGVDKPRPKVLFEPGEVVRVTEGPFNDFSGVVENVNYEKSKVRVAVQI
                     LGRSTPVELDFSQVEKA"
     gene            2124..2552
                     /gene="rplK"
                     /locus_tag="VIQ99_04715"
     CDS             2124..2552
                     /gene="rplK"
                     /locus_tag="VIQ99_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008285482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEY9182478.1"
                     /translation="MARKIETYIKLQVPAGKANPSPPVGPALGQHGVNIMEFCKAFNA
                     QTQGMEVGLPVPVVISVYNDRSFTFVTKTTPATVLLKKAAGIDKGSGTPNSNKVGKVT
                     RKQLEEIAKIKARDLNAADLDAAVKIIAGSARSMGLEVEG"
     gene            2555..3268
                     /gene="rplA"
                     /locus_tag="VIQ99_04720"
     CDS             2555..3268
                     /gene="rplA"
                     /locus_tag="VIQ99_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEY9182479.1"
                     /translation="MTKVTKAQKAAAGKVQPGKAYTADEALKLVKELAHAKFVESVDV
                     AINLGIDASKSDQVVRGSTVLPNGSGKKVRVAVFTQGANAEAAKQAGADVVGMDDLAE
                     RMQGGDLDFNVVIASPDAMRVVGKLGQLLGPRGLMPNPKVGTVSADVAGAVRNAKAGQ
                     VRYRADKGGTVHCVIGNVSFEVEALKQNLMALVADLNKAKPASAKGVYMQKVSVSSTM
                     GPGVLVDQSTLMVEEEDAA"
     gene            3519..4043
                     /gene="rplJ"
                     /locus_tag="VIQ99_04725"
     CDS             3519..4043
                     /gene="rplJ"
                     /locus_tag="VIQ99_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEY9182480.1"
                     /translation="MSRNVEAKQAVVTEVAAVAKTAQSAVAAEYRGLTVAEMTKLRVA
                     ARQAGVYVRVVKNTLARRAVEGTSFECMKGSLKGPLVLAFSREDPGAAARVVKGFAKE
                     HEKLVTVALSIGGELYPASDIDRLASLPTLADARTSLVRVMNAPLTKLVRTLAEPAAM
                     LARTLKARSEQAAS"
     gene            4090..4476
                     /gene="rplL"
                     /locus_tag="VIQ99_04730"
     CDS             4090..4476
                     /gene="rplL"
                     /locus_tag="VIQ99_04730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010946072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEY9182481.1"
                     /translation="MSLSNAELVEALSKKPILEIVELVKALEEKWGVSAAAPVAVAAV
                     GAAAPGAGAAAAEEKTEFNVVMDSFGENKVAVIKVVRTVTGLGLKEAKDLVEGAPSTV
                     KEGVKKDEAESIKKQLEEAGAKATIK"
     gene            4632..>7648
                     /gene="rpoB"
                     /locus_tag="VIQ99_04735"
     CDS             4632..>7648
                     /gene="rpoB"
                     /locus_tag="VIQ99_04735"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEY9182482.1"
                     /translation="MAYSFTEKKRIRKDFGKLPGILNVPYLLSIQIDSYQKFLQQEVA
                     GTERVEMGLHAAFRSVFPIVSYSGNAALEYVSYRLGDPVFDVKECQLRGLTYAAPLRV
                     LVRLMIYDKDAPGPKKKVKDIREQEVYLGEMPLMTDHGTFVINGTERVIVSQLHRSPG
                     VFFDHDKGKTHSSGKLLFSARVIPYRGSWLDFEFDPKDCVFVRIDRRRKLPVSIMLRA
                     LDYTNEQILDLFFEKNEFKLTADGVLLKLIPERLRGETASFDIKIGRKVIVEKDRRIT
                     MKHVRELEQAKVKDLEVPMDYLEGKILAHDIVDTSSGELLASANDELTKTVIEKLIGA
                     GVKKIETLFVNDLDRGAFISNTLKIDSSSTKLEALVEIYRMMRPGEPPTKEAAENLFQ
                     NLFFNSERYDLSAVGRMKFNRRVGRNESEGPGVLSKEDVIAVLKTLIDIRNGNGVVDD
                     IDHLGNRRVRSVGEMAENAFRIGLVRVERAVKERLTLAESEGLMPQEMINAKPVAAAV
                     KEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCP
                     IETPEGPNIGLINSLSVYARTNEYGFLETPYRRVVDGRVTADIDYLSAIEEGQYVIAQ
                     ANANLSPKGEFVDDLVSCRHQNEFALLPAEQIQYMDVSPKQIVSVAASLIPFLEHDDA
                     NRALMGSNMQRQAVPTLRTQTPLVGTGMERAVAVDSGVTVVARRGGIVDSVDASRIVV
                     RVKDEETKAGEAGVDIYNLTKYTRSNQNTCINQRPLVKAGNAIEKGDVLADGPSTSMG
                     ELALGQNLLVAFMPWNGYNFEDSILISERVVEEDRFTTIHIEELTCVARDTKLGPEEV
                     TADIPNVGDAALTKLDESGIAFIGAEVSAGDILVGKVTPKGETQLTPEEKLLRAIFGE
                     KASDVKDTSLRVPPGMDGTVIDVRVFTRDGVEKDGRALSIERQELEAVRKDLDDQQRI
                     LEDDIYQRVEKALINKVAAGGPNGLAAGAKITKT"
BASE COUNT         1517 a         2203 c         2644 g         1284 t
ORIGIN      
        1 agatcgacaa ggcgccggag gagaaggcgc gcggcatcac gattgcgacg gcgcacgtgg
       61 agtacgagag cgatgcgcgg cattacgcgc acgtggactg tcctgggcac gcggactacg
      121 tgaagaacat gatcacgggc gcggcgcaga tggacggggc gattctggtg gtgtcggcgg
      181 ccgacggtcc gatgccgcag acgcgggagc acattttgtt ggcgcgccag gtgggtgtgc
      241 cgtacatcgt ggtgtacatg aacaaggcgg acatggtgga cgacaaggag ctcttggagc
      301 tggtggagct cgaggtccga gatcttctga ccacgtacga gttccccggg gacaagacgc
      361 cgatcgtgat tggcagcgcg ctgaaggcgc tggaagggga cacgtcgccg ctggggacgc
      421 cgagcgtcga gaagctggtg gcggagatgg acaagtacat tccgatgccg gagcggttga
      481 tcgacggacc gtttttgatg tcgatcgagg acgtgttttc gatctcgggc cgcgggacgg
      541 tggtgacggg tcgaatcgac cgcgggatca tcaaggtcgg tgacgagatc gagattgtgg
      601 gcattcggcc gacgcagaag acgatttgca cgggcgtcga gatgttccgg aagctgctgg
      661 acgagggtcg tgcgggcgac aacgtgggcg tgctgctgcg gggcacgaag cgcgaggagg
      721 tcgagcgggg ccaggtgctg gcgaagccgg ggtcgatcac gccgcacacg aagttcgagt
      781 gcgaggtgta catcctgacg aaggaagagg gtggccgaca cacgccgttt ttcaaggggt
      841 accggccgca gttttacttc aggacgacgg acgtgacggg cgcggtggag ttgccggagg
      901 cgaccgagat ggtgatgccg ggggacaaca tccagatgaa ggtggagctg atttcgccga
      961 tcgcgatgga ggaaggctta aggttcgcga ttcgcgaggg cggccgcacc gtcggcgccg
     1021 gcgtcgtcgc caagatcatc caatagggac agctagcggt tacgccagta gctcaattgg
     1081 tagagcagcg gtctccaaaa ccgcaggttg ggggttcgag tccctcctgg cgtgccaact
     1141 tcgccgggta ggcggaagtg gtaataggcg tcttcgacac agggcatgga aacgagagta
     1201 gaagaacaac cgacgttcgt cgacacggcg aagctcgcgc tcgccatcgt cgtcgtgctg
     1261 ttggggctcg tcggctacta ctacttcgcc gagtcgtcgg tgctgctacg agccttgagc
     1321 gtaatcgcgg cgctcgcgat cggcgccggc gtcgcgttca cgtcgttgca gggacggtgg
     1381 ctctggaagt tcatccaggg ctcgcgagtc gagctgaaca aggtggtttg gcctacgcgc
     1441 gaagagaccc tgcagacgac cttgatcgtt ttggtcgtcg cgctgttcgg aggcgtgttt
     1501 ttctggctgc tcgatctgat gttgttgtgg ctcacgaccc gagtaacggg acaagggggc
     1561 ttgtaggcat atggccctgc agtggtacgt cgtgcacgca tactcgaact tcgagcacaa
     1621 ggtgaaggag tcgctgatcg agcgagttcg ccgtgcgggt ttgcaggaca agttcggcga
     1681 ggttctcgtt ccgacggagg aagtcgtcga gatgcgcgaa ggccagcgcc gcaagagcga
     1741 gcgcaagttc ttcccgggct atgtgctcgt gcagatggag atggacgacg agacttggca
     1801 cctcgtgaag gaagtgccga aggtgctcgg tttcatcggc ggcagcagcg acaagcctgc
     1861 gccgatcacg gacaaagaag cgcaggcgat cttgaatcgc gtgcaggaag gcgtcgacaa
     1921 gccgcggccg aaggtcctgt tcgagcccgg cgaggtcgtg cgcgtgacgg aaggcccgtt
     1981 caacgacttc agcggcgtcg tcgagaacgt gaattacgag aagagcaagg tcagggtggc
     2041 cgtgcaaatt ctcggtcggt cgactccggt cgagctcgac ttcagccaag tagaaaaagc
     2101 ataggcaacc aacggattag cgtatggcgc ggaaaatcga aacctacatc aagctgcagg
     2161 tcccggccgg gaaagcgaac ccgagcccgc cggtgggccc ggcgctcggc cagcacggcg
     2221 tgaacatcat ggagttctgc aaggcgttca acgcgcagac ccaaggcatg gaagtcggtc
     2281 ttcccgtgcc cgtcgtgatc tcggtctaca acgaccgcag cttcacgttc gtcacgaaaa
     2341 ctacgcccgc gaccgtgctg ctgaagaaag cggccggcat cgacaagggc agcggcacgc
     2401 cgaactcgaa caaagtcggc aaggtgacgc gcaagcaact cgaggaaatc gcgaagatca
     2461 aagcgcgcga cctcaatgct gccgacctcg atgccgcggt gaagatcatc gccggtagcg
     2521 cgcgcagcat gggtctcgag gtggagggtt agccgtgacg aaggtgacca aagcacaaaa
     2581 ggccgctgcc ggcaaagtgc agccgggcaa ggcgtatacg gccgatgagg ccctgaagct
     2641 cgtgaaggag ctcgcgcacg cgaagttcgt cgaatccgtg gacgtcgcga tcaacttagg
     2701 tatagacgca tcgaagtccg accaggtcgt gcgcggctcg accgtgctgc cgaacggcag
     2761 cggcaagaaa gtccgcgtgg ccgtgttcac gcagggcgcg aacgcggaag ccgcgaagca
     2821 ggccggagcc gacgtcgtcg gcatggacga cctcgcggag cgaatgcagg gcggcgacct
     2881 cgatttcaac gtcgtgatcg cgagccccga cgcgatgcgc gtcgtcggca agctcgggca
     2941 gctgctcggc ccgcgcgggc tcatgccgaa cccgaaggtc ggcaccgtgt ccgccgacgt
     3001 cgcgggcgcc gtgcgcaacg cgaaggcggg ccaggtgcgt taccgcgccg acaagggcgg
     3061 caccgtgcac tgcgtgatcg gcaacgtgag ctttgaggtc gaagcgctga agcagaattt
     3121 gatggcgctc gtggccgacc tgaacaaggc gaagcccgca tcggccaagg gcgtctatat
     3181 gcagaaggtt tccgtgtcct cgacgatggg ccccggtgtg ctcgtcgatc agtcgacgtt
     3241 gatggtcgag gaagaggacg cggcgtaagg caagggtttg tttctgagcg accgcggcag
     3301 cggtcgacat cgaagaccgt aggcctccgc acgatgcgga gttaatggcg aggccgccta
     3361 cgcagatggt gttacctgac tcggcatagc tccggtgagg cacaccgtcg acgaccgcca
     3421 tggatggccg gacgtcgtga cgcgcgcaag cgtcgcgatg ggtgtgcaga gccctcacgg
     3481 gcaattggca tctccgcaag gaggcgccgg gagttgatat gtcgcgaaat gtagaagcga
     3541 agcaagcggt agtcaccgag gtcgccgcgg tcgccaagac ggcgcagtct gcggtggccg
     3601 cggagtatcg cgggctcacc gtcgccgaaa tgacgaagct tcgggttgcc gctaggcaag
     3661 ccggcgtcta cgtgcgtgtc gtgaagaaca cgctcgcacg ccgggctgtc gaaggcacga
     3721 gcttcgagtg catgaagggc agcctgaagg gcccgctggt gctcgcgttc tcgcgcgagg
     3781 atccgggtgc cgcagcgcgg gtcgtcaagg gctttgcgaa ggagcacgag aagctcgtca
     3841 ccgtcgcatt gtcgatcggc ggcgagctct atccggcttc ggacatcgat cggttggcct
     3901 cgttgccgac gctcgccgac gctcgtacga gcctcgtgcg cgtgatgaac gcgccgctga
     3961 cgaagctcgt gcgcacgctc gccgagcccg cggcgatgtt ggcgcgaacg ctgaaggccc
     4021 gcagcgagca ggccgcttca taggttcaag tagtttcagg tatcaccgtt ttttcgagga
     4081 gagatcgtca tgtcgttgtc gaatgcagag ttggtcgaag cgctgagcaa gaagccgatc
     4141 ctggagatcg tggagctcgt gaaggcgctc gaagagaagt ggggcgtttc cgccgccgcg
     4201 cccgtggccg tcgccgccgt cggcgccgca gcgcccggcg ccggcgctgc cgcggcggag
     4261 gaaaagaccg agttcaacgt cgtcatggac tcgttcggcg agaacaaggt cgccgtgatc
     4321 aaggtcgtcc gtacggtcac gggcctcggt ttgaaggaag ccaaggatct cgtggaaggc
     4381 gcgccgagca ccgtgaagga aggcgtgaag aaggacgagg ccgagagcat caagaagcag
     4441 ctcgaggaag caggcgcgaa agccaccatc aagtgatggg gcggcacggc tgcgcaacgt
     4501 cgcgggttcg tctcgcatga gacgagccgc gatcgttcgc gtgcaggttt cgtacggtgc
     4561 cggccgccag cggggcggtc ggcctttgtt cgttttgttg ctggctcacc ctaattgtcg
     4621 gagtcgcaga catggcttat tcgttcactg agaagaagcg gatcaggaag gacttcggga
     4681 agctgccggg catcctgaac gttccctatc tcctttcgat tcagatcgat tcttatcaga
     4741 agttcctgca acaggaagtc gcgggcacgg aacgcgtcga gatgggtctg cacgctgcgt
     4801 tccgcagcgt cttcccgatc gtcagctact cgggcaatgc cgcgctcgag tacgtgagtt
     4861 atcgcttggg cgatccggtg ttcgacgtca aggagtgcca gcttcgtggg ctcacgtacg
     4921 ccgcgccgct gcgtgtgctc gtgcgcctga tgatctacga caaggacgcg ccgggaccga
     4981 agaagaaggt caaggacatc cgcgagcagg aggtctatct cggcgagatg ccgctcatga
     5041 ccgatcacgg aacgttcgtg atcaatggca cggagcgcgt gatcgtgtcg cagctgcacc
     5101 ggagccccgg cgtattcttc gatcacgaca agggtaagac gcattcgagc ggcaagctgc
     5161 tgttctccgc gcgcgtgatt ccgtaccgcg ggtcgtggct cgatttcgag ttcgacccca
     5221 aggattgcgt gttcgtccgt atcgatcggc gccgcaagct gccggtcagc atcatgttgc
     5281 gggcgctcga ttacacgaac gagcagatcc tcgatctgtt cttcgagaag aacgagttca
     5341 agcttacggc ggacggcgtg ctgctgaagc ttatccctga gcggctgcgc ggcgagacgg
     5401 ccagcttcga catcaagatc ggccgcaagg tcatcgtcga gaaggaccgc cgtatcacga
     5461 tgaagcacgt ccgcgagctc gagcaggcca aggtcaagga cctcgaggtc ccgatggact
     5521 acctcgaggg caagatcctc gcgcacgaca tcgtcgacac gtcgagcggc gagctgctcg
     5581 cgagcgcgaa cgacgagctc acgaagaccg tgatcgagaa gctgatcggt gccggcgtca
     5641 agaagatcga gacgctgttc gtgaacgacc tcgaccgcgg cgcgttcatc tcgaacacgc
     5701 tgaagatcga ctcgagctcc acgaagctcg aggcgctcgt cgagatctat cgcatgatgc
     5761 gtcccggcga gccgccgacg aaggaagcgg ccgagaacct cttccagaat ctcttcttca
     5821 acagcgagcg ctacgacctg tcggccgtcg gccgtatgaa attcaatcgc cgcgtgggcc
     5881 gcaacgagtc cgaaggcccc ggcgtgctga gcaaggaaga cgtgatcgcg gtgctgaaga
     5941 cgttgatcga tatccgcaac ggtaacggcg tcgtcgacga catcgaccac ctcggcaacc
     6001 gccgcgtccg cagcgtcggt gaaatggccg agaacgcgtt ccgcatcggc ttggttcgcg
     6061 tcgagcgcgc cgtgaaggag cgcctcacac tcgccgagtc cgagggcctg atgccgcagg
     6121 agatgatcaa cgcgaagccc gtggccgccg ccgtcaagga attcttcggc tcgagccagc
     6181 tgtcgcagtt catggaccag aacaacccgc tgtccgaggt cacgcacaag cggcgcgtgt
     6241 cggcgctcgg acctggcggc ctcacgcgcg agcgtgccgg tttcgaggtt cgcgacgtgc
     6301 acccgacgca ctatggccgc gtctgcccga tcgagacgcc ggaaggtccg aacatcggcc
     6361 tgatcaactc gttgtccgtc tatgcgcgga ccaacgaata cggcttcctc gagacgccgt
     6421 accggcgcgt cgtcgacggc cgcgtcacgg ccgatatcga ctacctgtcg gcgatcgaag
     6481 aaggccagta cgtgatcgcg caggcgaacg cgaatctgtc gccgaagggc gagttcgtgg
     6541 acgacctggt atcgtgccgc caccagaacg agtttgctct gttgccggcc gagcagatcc
     6601 aatacatgga cgtctcgccg aagcagatcg tgtcggtggc tgcctcgttg attccgttcc
     6661 tcgagcacga cgacgcgaac cgcgcgttga tgggctcgaa catgcaacgg caagccgtgc
     6721 cgacgctcag gacccagacg ccgttggtcg gcacgggcat ggagcgcgcc gtagcggtcg
     6781 actcgggcgt cacggtcgtc gccaggcgcg gcggcatcgt cgactccgtc gacgcatcgc
     6841 gtatcgtcgt tcgcgtgaag gacgaggaga cgaaggccgg cgaggccggt gtcgatatct
     6901 acaacctcac gaaatacacg cgctcgaacc agaacacctg catcaatcag cgtccgctcg
     6961 tcaaagccgg taacgcgatc gagaagggcg atgtgctcgc ggacggtccg tcgaccagca
     7021 tgggcgagct cgcgctgggt cagaacctcc tcgtcgcgtt catgccgtgg aacggctaca
     7081 acttcgagga ctcgattctg atctccgagc gcgtcgtcga ggaggatcgc ttcacgacga
     7141 ttcacatcga agagctcacc tgcgtcgcgc gcgacacgaa gctcgggccc gaggaggtca
     7201 ccgcggacat cccgaacgtc ggcgacgccg cgttgacgaa gctcgacgag agcggtatcg
     7261 cgttcatcgg cgccgaggtc agcgccggcg acatcctcgt cggcaaggtc acgccgaaag
     7321 gcgagacgca gctgacgccc gaggagaagc tgctgcgcgc gatcttcggc gagaaggctt
     7381 ccgacgttaa ggacacgagc ctgcgcgtgc cgcccggtat ggacggcacc gtgatcgacg
     7441 tgcgcgtgtt cacgcgcgac ggcgtcgaga aggacggccg cgcgttgtcg atcgagcgcc
     7501 aggagctcga ggccgtgcgc aaggacttgg acgatcagca gcgcatcctc gaggacgaca
     7561 tttatcagcg cgtcgagaaa gcgctgatca acaaggtcgc tgccggcggt ccgaacggct
     7621 tggcggcggg cgccaagatc acgaagac
//
LOCUS       DATCUD010000326         2732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31654, whole genome shotgun sequence.
ACCESSION   DATCUD010000326 DATCUD010000000
VERSION     DATCUD010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31654"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            148..930
                     /locus_tag="VIQ99_04740"
     CDS             148..930
                     /locus_tag="VIQ99_04740"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011386307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEY9182483.1"
                     /translation="MAQFTLPANSKVKPGKNHGGAAGAANVKEFKIYRYDPTSGENPR
                     VDTYEVDMDNCAPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGTNTLACLK
                     PIEDCKGAVKIYPLPHMPVVKDLVPDLTTFYAQYAAVKPWLESQTPPPPDRERLQSKD
                     DQEKINTPSACILCACCSTSCPSYWWNGDRYLGPAALLQAYRWIVDSRDEMKGERLDQ
                     LEDAFRLYRCHTILNCTQACPKDLNPGKAIGEIKKMIAERRL"
     gene            963..1202
                     /locus_tag="VIQ99_04745"
     CDS             963..1202
                     /locus_tag="VIQ99_04745"
                     /inference="COORDINATES: protein motif:HMM:NF015870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEY9182484.1"
                     /translation="MAKLKWRCRRGMRELDAVLQGFVEANAATLTPNEIACFEAILDL
                     PDPTLHAYLLGRSVPSDPATAALVEHIRAGHRPSA"
     gene            1213..1578
                     /locus_tag="VIQ99_04750"
     CDS             1213..1578
                     /locus_tag="VIQ99_04750"
                     /inference="COORDINATES: protein motif:HMM:NF018908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HEY9182485.1"
                     /translation="MLSLWWLGLHGLLAATALLIGWPAPTKVAALCAVFVHALWRKPS
                     STRAVIEVGADGACRIPAVNAEPFEPDAGTLLTPFCVRIVARSSRDTVDILLLADQVP
                     REDWRRLTAILRRATARRA"
     gene            1681..2301
                     /gene="rpoE"
                     /locus_tag="VIQ99_04755"
     CDS             1681..2301
                     /gene="rpoE"
                     /locus_tag="VIQ99_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HEY9182486.1"
                     /translation="MGSTEQRLTEQPDRHPPGSGAADLALIRRVQQGDRSAFDLLVVK
                     YQHKIVKLIMRYVRDSAEALDVAQEAFLKAYRAAPSFRGDSAFYTWLYRIAINTAKNH
                     LVALGRKPMTFDLDTQDPEQSVILNELREIDTPEALVQSDDVRDAINRAIHALPEELR
                     TAILLREIEGMSYEEIAATMECPVGTVRSRIFRAREAIDKALAPLM"
     gene            2330..>2732
                     /locus_tag="VIQ99_04760"
     CDS             2330..>2732
                     /locus_tag="VIQ99_04760"
                     /inference="COORDINATES: protein motif:HMM:NF015810.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor negative regulatory protein"
                     /protein_id="HEY9182487.1"
                     /translation="MTDQINDQISAFIDNELSADESALLVRRFERDPEARARAMRYTL
                     IGAAMRGELLDPHPTVLRHRVAAALDGAAPSTARTRAGWSQRFTRPLLGLGIAAAVAI
                     VAIGALRVVNDASFAPGGVAPDAAPLQTNVPV"
BASE COUNT          511 a          880 c          864 g          477 t
ORIGIN      
        1 gaacggtgcc gtccgtttcg cgtataggcc ggtcaccatg acgacgttga ccgacgaggt
       61 ccaaccgatt cctccaaagg cgcgcacgta ctgatgcaca cggggcacct ccggaaccga
      121 aacgacgaga cgagctaagg aatcacgatg gcgcagttca cgttaccggc caactccaag
      181 gtcaagcccg gcaagaacca cggcggagcc gcgggcgcgg cgaacgtcaa agagttcaag
      241 atctatcgct acgacccgac atcgggcgaa aacccgcgcg tcgacaccta cgaggtcgac
      301 atggacaact gcgcgccgat ggtgctcgac gcgctgatca agatcaaaaa cgagatcgac
      361 ccctccttga cgttccgccg atcgtgccgc gaggggattt gcggctcgtg cgcgatgaac
      421 atcgacggca cgaacacact cgcgtgcttg aagccgatcg aagattgcaa gggcgcagtc
      481 aagatctatc cgttgccgca catgcccgtc gtcaaagatc tcgtgcccga cctcacgacg
      541 ttctacgcgc agtacgcggc cgtgaagcca tggctcgagt cgcagacccc gccgccgccg
      601 gatcgcgagc ggctgcaatc gaaagacgac caggagaaga tcaatacacc ctcggcgtgc
      661 atcctgtgcg cgtgttgctc gacgtcgtgc ccgagctatt ggtggaacgg tgatcgctat
      721 ctcggtcccg cagcactgtt gcaggcctat cgctggatcg tcgacagccg cgacgagatg
      781 aagggcgagc gcctcgatca gctcgaggac gcgttccgct tgtatcgttg ccacacgatc
      841 ctgaactgca cgcaggcctg cccgaaagac ttgaacccag gcaaagcgat cggcgagatc
      901 aagaagatga tcgccgagcg gcgcctgtag cgtgcccaag gaccgacctc gtggagccga
      961 ggttggctaa gctcaagtgg cgctgccggc gcgggatgcg cgagctcgac gcggtccttc
     1021 agggtttcgt cgaggcgaac gcggcgacgc tgacgccgaa cgaaatcgcg tgtttcgagg
     1081 cgattctcga cctgcccgat ccgacgctgc acgcttatct tttaggacgc agtgtcccca
     1141 gcgatcccgc caccgcagcc ctcgtcgagc acattcgcgc cggtcatcgt ccttcggcct
     1201 gagccgtcac gcgtgctgtc gctgtggtgg ctcgggttac acgggctgct ggccgcaacg
     1261 gcgttgctga tcggctggcc ggcgcccacg aaggttgcgg cgctctgcgc ggtcttcgtt
     1321 catgcgctat ggcgaaaacc gtcctcgacg cgtgccgtga tcgaggtcgg tgcggacggt
     1381 gcctgccgga ttccggctgt gaacgccgag ccgttcgagc ccgatgccgg gaccctgctc
     1441 acgccgtttt gcgtccgaat cgtcgcgcgg agctcgcgtg acacagtcga catattgctg
     1501 ctcgccgatc aggtcccgcg ggaggattgg cggcgattga cggcgatcct gcgccgcgcg
     1561 accgcgcgca gggcgtgaga tacgaggttt cgcgccgtct tcggcccaaa tctgcgatag
     1621 aattcaagga actcggggac gcgggcacgc gtctcatgcc gagcgaactt ttggtgcagc
     1681 atggggtcta ccgagcagcg tttgacagag cagcctgata gacatcctcc cggcagcgga
     1741 gccgccgacc tcgctctgat tcgacgtgtt cagcagggcg acaggtcggc attcgacttg
     1801 ttggtcgtca agtatcagca caagatcgtc aagctcatca tgcgttatgt tcgcgattcg
     1861 gccgaggcac tggacgtcgc ccaagaagcg ttcctgaagg cttatcgtgc ggcgccctcg
     1921 tttcgcggcg acagcgcgtt ctatacctgg ctttatcgga tcgcgatcaa cacggcgaag
     1981 aaccacctcg tcgccttggg tcgaaagccg atgaccttcg atctcgacac tcaagatccc
     2041 gagcagtccg tcatactcaa cgagctccgc gagatcgaca ctccggaagc cttggttcag
     2101 tcggacgacg ttcgcgacgc gatcaatcgt gcgattcacg cgttgccgga agagttgcgc
     2161 accgcgattc tgctgcgcga gatcgaaggc atgagctacg aggagatcgc cgcgacgatg
     2221 gaatgccccg tcgggacggt acgttcgcgg atctttcgcg cgcgtgaggc gatcgacaaa
     2281 gccctcgcac ccctgatgta acgccactcg aagagccgac gcattcccca tgacagacca
     2341 gatcaacgac caaatctcgg cgttcataga caacgagctc tcggccgatg agagcgcgct
     2401 gctcgtcagg cgcttcgagc gcgatccgga agcgcgtgcg cgagccatgc gctacacgct
     2461 gatcggcgcc gcgatgcgcg gcgagctgct cgatcctcat ccgacggttt tgcggcaccg
     2521 cgtggcggcc gcgcttgacg gcgccgcgcc cagcacggcc cgcacccgcg ccggctggtc
     2581 ccaacgattc acgcggccgt tgctcggcct cggcatcgcg gcggccgtgg cgatcgtggc
     2641 gatcggcgcg ctgcgcgtcg tgaacgacgc gtcgttcgcg ccgggtggcg tcgcgccgga
     2701 tgccgcgccg ctgcagacga acgttccggt ca
//
LOCUS       DATCUD010000327         1802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88416, whole genome shotgun sequence.
ACCESSION   DATCUD010000327 DATCUD010000000
VERSION     DATCUD010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88416"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VIQ99_04765"
     CDS             <1..781
                     /locus_tag="VIQ99_04765"
                     /inference="COORDINATES: protein motif:HMM:NF014477.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEY9182488.1"
                     /translation="IELPAELVGLFSLAQQVHEASDGCFDPTVRPLVRAWGFDGDHPA
                     VPAAAALAEARALVGLHRLELVDASRVRKAIPQLALDMASIGQGYSAERLATVLEEHG
                     SEAYLAEIGGEIVARGLKPDGTPWRIGVERPSATEPTPGPTLRIPEDGRTAVITSGAY
                     RHYFDDSGRRFGHVIDARTGSPIDHSLLAVTVVGRDAARAAAWATALLCLGPKDAAAV
                     AEREQLAALLWIGSDDGSATLERSPAFESDWRTLLDEAAPR"
     gene            complement(778..>1802)
                     /locus_tag="VIQ99_04770"
     CDS             complement(778..>1802)
                     /locus_tag="VIQ99_04770"
                     /inference="COORDINATES: protein motif:HMM:NF013694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEY9182489.1"
                     /translation="PAEPRARVRLISDADGDPMITGFIAEGGRLRRIDDALSEVANLV
                     WVDLLSPSADEETLLEARLGMDVPTRREVERLEFSGRLYREEDAVVMTATLPARTDSD
                     DLLLAPVAFVVADGKLITVRYHEPRVFKTFPQRAGEANLGCVDGEAVLVAMLEAIVDR
                     ITDILERTEEEVDAISRDIFRSEEPRRGGRKLMATLQLIGRKGDLCSNIRDCLVSLQR
                     LAGFFGQVLTDRGNAKELRGRVKTLGHYLGSLGDQTSFLSQKVTFLLDATLGMISIEQ
                     SNIIKIFSIAAGVFLPPTLIASIYGMNFRFLPEFNWPWGYPFALVMMLASAVLPFWYF
                     KRRGWL"
BASE COUNT          324 a          604 c          580 g          294 t
ORIGIN      
        1 gatcgagctg ccggccgagc tcgtcggcct attcagtctc gcccagcaag tgcacgaagc
       61 cagcgacggc tgtttcgacc cgaccgtccg cccgctggtg cgcgcctggg ggttcgatgg
      121 cgaccacccc gccgtcccgg cggcggcggc cctggccgag gctcgtgcgc tcgtaggcct
      181 ccaccgcctc gagctggtcg acgcatcacg cgttcgcaag gccataccgc agctcgcgct
      241 cgacatggcc agcatcggtc aaggctactc ggcggagcgc ctcgcaacgg tgctcgagga
      301 gcacggcagc gaggcttatc tcgccgagat cggcggcgag atcgtcgctc gcggcctcaa
      361 gcccgacgga acaccctggc ggatcggtgt cgagcgccct tcggcgaccg agcccacgcc
      421 ggggcccacg ctccggattc cggaggatgg ccgcacggca gtgatcacga gcggcgcgta
      481 tcgacactat ttcgatgata gcggccgtcg tttcggtcac gtgatcgacg cgcgaaccgg
      541 gtcgcccatc gaccactcgc tgttggccgt gaccgtcgtc ggccgcgacg cggccagggc
      601 agcggcctgg gcgactgcac tcctctgcct cgggccgaag gatgctgcag cggtcgcaga
      661 gcgcgagcag ctcgcggccc tgctatggat cggaagtgac gacggatccg cgactctcga
      721 gcgcagcccg gcgttcgagt ccgactggcg aacgctgctc gatgaggcgg cgccgcgtta
      781 gagccaaccg cgccgcttga agtaccagaa gggcaacacc gccgatgcca acatcatcac
      841 caacgcgaac gggtaacccc acggccagtt gaattcgggt aggaacctga aattcatgcc
      901 gtagatcgat gcgatcagcg tcggcggcag aaacactccg gcggcgatcg aaaaaatctt
      961 gatgatgtta ctttgctcga tgctgatcat gccgagcgtc gcgtcgagca agaacgtgac
     1021 tttctgcgac aagaaagacg tctgatcgcc gagcgagccc aggtagtgcc cgagcgtctt
     1081 gactcgtccg cgcaactcct tcgcgttacc gcgatcggtc aacacttggc cgaaaaaccc
     1141 ggcgaggcgc tgcagcgaca ccaggcaatc gcgaatgttc gagcacaggt cgcccttgcg
     1201 cccgatcagc tgcagtgtgg ccatgagctt ccggccgcca cgccgcggct cttcgctgcg
     1261 gaagatgtcg cgcgagatcg cgtcgacctc ctcttcggta cgctcgagga tatcggtgat
     1321 ccggtcgacg atggcctcga gcatcgcgac gagcacggct tcaccgtcga cgcacccgag
     1381 attcgcttcg ccggcacgct gcgggaatgt tttgaagact cgcggctcgt gatatctgac
     1441 cgtgatcagc ttgccgtccg cgacgacgaa cgccacgggc gccaacagca aatcgtcgct
     1501 gtcggtgcgc gccggcagcg tcgccgtcat gacgacggca tcctcctccc tgtagagccg
     1561 gcctgaaaac tcgaggcgtt cgacctcgcg tcgagtagga acgtccatgc cgaggcgcgc
     1621 ctcgagcagg gtctcttcgt cggccgatgg gctcagcagg tcgacccaaa cgaggttcgc
     1681 gacttcggag agagcgtcgt cgattctgcg gagccggcca ccctcggcaa tgaaacccgt
     1741 gatcatcgga tcaccatccg catcggaaat caggcggact ctagcacgcg gctcggcggg
     1801 gg
//
LOCUS       DATCUD010000328         2029 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3386, whole genome shotgun sequence.
ACCESSION   DATCUD010000328 DATCUD010000000
VERSION     DATCUD010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3386"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VIQ99_04775"
     CDS             complement(<1..331)
                     /locus_tag="VIQ99_04775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182490.1"
                     /translation="MSKSLPGWAFFLCAVGMPVAAQSLVDELAWAYAITPGTAPPAPV
                     DDGTRYSLPGSDRQFTLDEIRNRMGPADWYPGDHPSMPPIVAVGREAAGIWACSLCHY
                     PNGKGRPE"
     gene            complement(413..1105)
                     /locus_tag="VIQ99_04780"
     CDS             complement(413..1105)
                     /locus_tag="VIQ99_04780"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY9182491.1"
                     /translation="MEQKTPTAAERRIRQKRGQLTYDALIQTCFALLETKEFDEISIA
                     ELAREAGYSVGAFYARFQSKDELFDAMVARHLEDRRKVRKQQFASAKDATLITDLLEE
                     TVHYYWGRRHFWRAALIRSMRDPDFWTPIRKLSHEFADSLIGRVVACRGRALSAQEEA
                     NLRFAVQMTFGTINNTILNRPGPFFMDQSLFVGNLVRAFRLISGYDELAGPSSRGQGR
                     KPRRGNGEIAKR"
     gene            complement(1213..>2029)
                     /locus_tag="VIQ99_04785"
     CDS             complement(1213..>2029)
                     /locus_tag="VIQ99_04785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HEY9182492.1"
                     /translation="RTQPFPTRPPAFDRQGITEDDLIDFTPELRAEALEILARYTHGP
                     LFTPPSIRDDTPGGNPGTIQLPGSVGGPNWTGGAFDPETGILYVPSSTAPFVADIEPG
                     DPAVTNLRYIKGKRLWGPAGPRGLPLFKPPWGRISAIDMNRGEIVWQVANGDGPRDNP
                     AIAHLSLGPLGNPGHAAPLVTKTLLFVGEGSDAMVGTARIPPGMPFDTAPNYGEPWFR
                     AYDKTTGEVLAEIELPAGTTGAPITYLHHGKQYIVVAVGGRDVEPEWVALSLP"
BASE COUNT          341 a          664 c          671 g          353 t
ORIGIN      
        1 tctcggggcg accctttcca ttcgggtagt ggcacaacga gcacgcccag atgccggcag
       61 cttcgcgccc gaccgcgacg atcggcggca tgctcgggtg atcgccggga taccaatccg
      121 cgggccccat tcggttacgg atctcgtcga gcgtgaactg gcgatcgctg cccggcagcg
      181 agtagcgcgt accgtcgtcg acgggcgccg gcggcgcagt gccgggggtg atggcgtacg
      241 cccacgcgag ctcatcgacg agcgactgtg ccgcaaccgg cataccgacg gcgcatagaa
      301 agaacgccca acccggaagc gacttactca ttgcgatacg acacggcgcc ttgcatcgga
      361 gccccccggg gacggaaagc acgttggaaa ccgtagccgg cgcgagtgcc gatcagcgct
      421 ttgcgatctc accgttcccg cgccgcggtt tccgcccctg accgcgcgac gaagggccgg
      481 cgagctcatc gtagccggat atcaggcgaa atgcgcgcac gagatttccg acgaacagcg
      541 attgatccat gaagaacggg ccggggcgat tcaggatcgt gttgttgatc gtgccgaacg
      601 tcatttgcac ggcaaagcga agattggcct cttcctgcgc gctcagcgcg cggccgcggc
      661 aagccacgac gcggccgatc agagaatcgg cgaactcgtg actcagcttg cgaatcggcg
      721 tccagaaatc cggatcgcgc atgctgcgta tcaacgccgc acgccaaaag tggcgtcggc
      781 cccagtagta gtggacggtc tcttccagca ggtcggtgat cagggtcgcg tccttcgcgc
      841 tcgcgaactg ttgcttgcga actttgcggc gatcctcgag atggcgcgcg accatcgcgt
      901 cgaacagctc gtccttgctt tgaaaccgcg cgtagaaggc cccgacggaa tagccggcct
      961 cgcgtgcaag ctccgcgatc gaaatctcgt cgaactcctt cgtctcgagc agcgcgaagc
     1021 aggtttggat cagcgcgtca tacgtcagct gcccgcgctt ctggcggatt cttcgttcgg
     1081 cggcggtcgg ggttttctgc tccaacagta attgtcctgg ttcagctcag gatacagaac
     1141 cgctattctg ttttgcaccc gtcgagcgat cgagggttcg cgagccggcg agccggaccg
     1201 cgcggtacgg cgctagggca ggctcagcgc cacccactcg ggctcgacgt cgcggccgcc
     1261 cacggctacg acgatatatt gcttcccatg gtgcaaatag gtgatcggcg cgccggtcgt
     1321 gccggccggc agctcgatct cggcgagcac ttcgccggtg gtcttgtcgt aagcgcggaa
     1381 ccacggctcg ccgtagttcg gtgccgtgtc gaacggcatg ccgggcggaa ttcgtgcggt
     1441 gccgaccatc gcatccgaac cttcgccgac gaacagcagc gtcttcgtca cgagcggcgc
     1501 cgcgtgcccg ggattcccga gcggccccaa gctcaggtgc gcgatcgcgg ggttatcccg
     1561 tggtccgtcg ccgtttgcga cctgccacac gatctcgcct cggttcatgt cgatcgcgct
     1621 gatccggccc cacggcggct tgaacagcgg caggcctcgc ggtcccgccg ggccccagag
     1681 gcgcttgccc ttgatgtacc gcaagttcgt cacggccgga tcgccgggct cgatgtcggc
     1741 aacgaacggc gccgtcgatg acgggacata caggattccg gtctcgggat cgaacgcgcc
     1801 gccggtccag ttcgggccgc cgaccgaccc cggcaactga atcgtgccgg ggttgccgcc
     1861 cggcgtgtcg tcgcgaatgg agggcggtgt gaacaacggc ccgtgtgtat agcgtgcgag
     1921 gatctcgagc gcctcggcgc gcagctccgg cgtgaagtcg atcagatcat cctcggtgat
     1981 cccctgccgg tcgaaagccg ggggcctggt cggaaacggc tgcgtgcgc
//
LOCUS       DATCUD010000329         2132 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3387, whole genome shotgun sequence.
ACCESSION   DATCUD010000329 DATCUD010000000
VERSION     DATCUD010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3387"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..923)
                     /locus_tag="VIQ99_04790"
     CDS             complement(<1..923)
                     /locus_tag="VIQ99_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011495108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182493.1"
                     /translation="MDALVIKDLRKVYRNGVEALKGIDLTVREGDFFALLGPNGAGKT
                     TAIGIITSLVRKTSGSVTVFGHDIETQRDAAKACIGVVPQEINLNMFERNDHTLINQA
                     GYYGVPKGVATARAEKYLKALHLWDRRTGIARTLSGGMKRRLMIARALVHEPRLLILD
                     EPTAGVDIEIRRSMWDFMREINAAGTTIILTTHYLEEAESLCRNIAIIDEGRIIENDT
                     MANVIGKLQLEVFVLSLKEPVSSAPALAGYTVRLRNEREIEVEVVKGQGLNDVFTQLS
                     SLGLHVASMRTKTNRLEELFIRLVEKQERRSA"
     gene            complement(1002..1574)
                     /locus_tag="VIQ99_04795"
     CDS             complement(1002..1574)
                     /locus_tag="VIQ99_04795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182494.1"
                     /translation="MSMTGVLDHLQQVQELNRVFLGLLQSRVREQSSCLGLPAEALPP
                     LRVASPELLDAWARFPRALFRLALDPRSRVLPSASSGSYDEAEHDLCLSILLAMRHTS
                     RYSGYQARLLLGLEAAEIEALTALPLPNLQRLACAPGLLQCAFAECRWFWPALLTATR
                     PEVRRQLLLMALQPRAQPAWPPRKPPQASA"
     gene            1686..>2132
                     /locus_tag="VIQ99_04800"
     CDS             1686..>2132
                     /locus_tag="VIQ99_04800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182495.1"
                     /translation="MRATDDRYRGEQARFELAIRMIGHEARTGTIRFFTGLNDDRIRK
                     LYATYFKFNDTPVRRQRGRSPTRVSPLVRTPQRALESGVFANLLLANGLLSLESPPGP
                     ALKHNVDLGHRLCECFETFTQLVPRASLSFEWAFNLLANVSKHSHRR"
BASE COUNT          371 a          676 c          687 g          398 t
ORIGIN      
        1 gcggaccgcc gctcctgttt ctcgacaagg cggatgaata gctcctcgag cctgttcgtc
       61 ttcgtgcgca tgctcgcgac gtggaggccg agcgacgaca gttgcgtgaa cacgtcgttc
      121 agcccctggc ccttgaccac ctcgacttcg atctcgcgct cgttacgcaa tcgcaccgtg
      181 tagcctgcga gcgccggcgc cgagctgacc ggctccttca ggctcaacac gaacacctcg
      241 agctgtagct tgccgatcac gttggccatc gtgtcgttct cgatgatgcg gccttcgtcg
      301 atgatcgcga tgttgcggca caggctctcg gcttcctcga gatagtgagt ggtcaggatg
      361 atcgtcgtgc cggctgcgtt gatctcgcgc atgaagtccc acatcgagcg acgaatctcg
      421 atgtcgacgc cggccgtcgg ttcgtcgagt atcagcagcc tcggctcatg cacgagcgcg
      481 cgtgcaatca tgagtcgtcg cttcatcccg cccgacagcg ttcgcgcgat tccggttcgg
      541 cgatcccaga gatgcagcgc cttcaggtac ttttccgcgc gcgcggtcgc gacgcctttc
      601 ggcacaccgt agtacccggc ctggttgatc agcgtgtggt cgttgcgctc gaacatgttc
      661 aggttgatct cctgagggac gacgccgatg caggccttgg cggcgtcgcg ctgcgtttcg
      721 atgtcgtgcc cgaacacggt gaccgagccg ctggtctttc ggaccaacga cgtgatgatg
      781 ccgatcgccg tggtcttgcc cgcgccgttc gggcccagca atgcgaagaa gtcgccttca
      841 cgcacggtca ggtcgatacc cttgagcgcc tcgacaccgt tgcgatagac cttgcgtagg
      901 tccttgatca ctaacgcgtc catgtttctc tgcacgcgga gccgcgctcc gagggcggct
      961 attgtacggg ccgccggcgc gtcgtggaga aggtgggcgt gtcaggcgct cgcttgcggc
     1021 ggcttgcgcg gtggccatgc cggctgagcg cgaggctgca gcgccatcaa caggagctgg
     1081 cgacggacct cgggacgagt cgctgtcagc agagccggcc agaaccatcg gcactctgcg
     1141 aacgcgcatt gcaacagccc cggcgcgcag gcgagacgtt gcagattcgg caggggcagt
     1201 gcggtcagcg cctcgatctc cgcggcctcg aggccaagca acagccgcgc ctggtagccg
     1261 ctgtagcggc tcgtgtgccg catcgcgagc aggatcgaaa ggcacagatc gtgctccgct
     1321 tcgtcgtaac ttccgctgga cgcagacgga agcacgcgcg atcgcgggtc cagggcaagc
     1381 cgaaacaacg cgcgcggaaa tcgcgcccac gcgtcgagca gctcggggct cgcaacccgc
     1441 agcggcggca gtgcttcggc aggcagaccg aggcacgagc tctgctcgcg gacacgcgat
     1501 tgcagcaacc cgaggaacac gcgattcagc tcctgaacct gctgaaggtg gtcgaggaca
     1561 ccggtcatag acatcggctt cagacccctt tttcatggca gatttgccat atatggctct
     1621 aaaataccac taatggctag cgtacgataa cgtcggaatg tggccgaaac ggggggaaag
     1681 gcgacatgag ggcaaccgac gaccgctatc ggggtgagca ggcgcggttc gagctcgcga
     1741 ttcggatgat tgggcacgag gctcggacag gaacgattcg cttcttcacg gggctgaacg
     1801 acgaccggat tcggaagctg tacgcgacgt acttcaagtt caacgacacg ccggtgcgcc
     1861 ggcagcgcgg ccggtcgccg acgcgggtct cgccgctcgt gcggacgccg cagcgtgcgc
     1921 tcgagtccgg cgtgttcgcg aacctattgc tcgcgaacgg cctgttatcg ctcgagtccc
     1981 cgccgggacc cgcgctcaag cacaacgtcg acctcggtca tcgcctatgc gagtgcttcg
     2041 aaacgttcac gcagctggtg ccgcgcgcgt cattgtcgtt cgagtgggct ttcaatctgc
     2101 tcgcgaacgt ttcgaagcac tcgcataggc ga
//
LOCUS       DATCUD010000330         3451 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81305, whole genome shotgun sequence.
ACCESSION   DATCUD010000330 DATCUD010000000
VERSION     DATCUD010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3451
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81305"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..272)
                     /locus_tag="VIQ99_04805"
     CDS             complement(<1..272)
                     /locus_tag="VIQ99_04805"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9182496.1"
                     /translation="MFTKVLVLCDGNDPDQPAVRRALTCVAEDGEIEILAVVYEPMLE
                     GYLGNHEIYEPLRQRVIAERREAAAALARAVESQGVKSFARAVWSHP"
     gene            380..910
                     /locus_tag="VIQ99_04810"
     CDS             380..910
                     /locus_tag="VIQ99_04810"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY9182497.1"
                     /translation="MANDAADAVVTLRDGRRVTIRPIQRDDVERNVAFLDALSPPSKH
                     FLFLGGIARLSDEELKRLCDPDYARDMAYVAVATDPNAPGGQRQVGVCRYAGADDATG
                     AEISVAVADDWQDRGLGKLLLRRLIEHARTHGVRRLYSMDSAANEPMRRLARDVGFRE
                     QPDPDDIRQVIYSLQP"
     gene            997..1515
                     /locus_tag="VIQ99_04815"
     CDS             997..1515
                     /locus_tag="VIQ99_04815"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9182498.1"
                     /translation="MAIGDLVPWRWGSLRRFDDDKSFATFRSEMEQLHRSIDRLFADA
                     WGGAVPGSLLSDTAITGRITPRLDVTEDDKAFHVTVELPGMTDKDVAVSVTDRALTIR
                     GEKKEEKETKDKDVYRRERAYGSFRREIELPSDVDAGKIEAAFKSGVLTIDLPKTKEA
                     QDRVKQIPVKAA"
     gene            1596..1988
                     /locus_tag="VIQ99_04820"
     CDS             1596..1988
                     /locus_tag="VIQ99_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9182499.1"
                     /translation="MRNTFLGAALTLAAIGSTAHAADDDLGARLFLNHCAACHGYEAE
                     GGGPVAATMRVSMPNLRTLAQRNNGVFPTDDVTAYVDGREINPAHGDRQMPIWGDVFR
                     GKDQGTAERTVRRRIAAVVEFIEALQYR"
     gene            complement(1963..2589)
                     /locus_tag="VIQ99_04825"
     CDS             complement(1963..2589)
                     /locus_tag="VIQ99_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020584961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182500.1"
                     /translation="MVYLVDDDEAVRDSLGMLFKSIGLKHESYASALDFLQHYDPRRH
                     ACLVADIRMPGLSGLELQQRLNEQGAEIPIIFITGHGDVPMAVTAMKSGAADFIQKPF
                     RDQDLIDRIHKGLDRDRESRTSRTERDAIRARIALLTPRENEVMQRVVRGQANKVIAM
                     DLGVSQRTVELHRARVMRKLKMRSLAELVHAIDKIGDRAAPSGTAEPR"
     gene            complement(2610..>3451)
                     /locus_tag="VIQ99_04830"
     CDS             complement(2610..>3451)
                     /locus_tag="VIQ99_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182501.1"
                     /translation="GELFPVSLAVGDALSDGQRRFVGIIRDLSAQRAAEQRTRALEVR
                     LAHVGRFNLMGEMAAGIAHEINQPLSAIATYSQAAKRLIQRPDLDTAMLTEICAKMDE
                     QARRAGQVIDNLRKFIRKQDVDTQSLNVNRVIEDVMSLIEADARSEGIPVRVDAGEGL
                     PNVRADAVQLQQVLLNLTRNSVDAMRGGLGKERGIIIATERSESGGVRISVTDHGHGV
                     SRQLGDHIFHPFVTTKHDGLGVGLAISKTIVQSCHGSLTYSDNPRGGSIFIVELPPDR
                     GAE"
BASE COUNT          638 a         1129 c         1081 g          603 t
ORIGIN      
        1 ggatgcgacc atacggcgcg cgcaaagctc ttcacgccct gactctcgac ggctcgtgcg
       61 agagccgccg cagcctcgcg gcgctccgct atcacccgtt ggcgcaacgg ctcgtagatc
      121 tcgtggttgc cgagatagcc ctcgagcatg ggctcgtaga cgacggcgag gatctcgatc
      181 tccccatcct ccgcgacaca ggtcaacgcg cggcgcaccg cgggctggtc gggatcgttg
      241 ccgtcgcaaa gaaccaacac tttcgtgaac atgcccggat tttatattac gtacgcgaag
      301 cggcgcgcca ggtaataata cgtagagacg acagcgcatc gatacacgta acgtccggcg
      361 acacgaagga gaacccgtga tggcgaacga cgccgctgat gctgtcgtga cgctgcgtga
      421 cggccgccgc gtcacgattc gacccatcca acgtgacgac gtcgagcgca acgtcgcgtt
      481 cctcgacgcg ctctcgccgc cgagcaagca cttcttgttt ctcggtggca tcgcgcgttt
      541 gagcgacgag gagctgaagc gcctgtgcga tcccgactac gctcgcgaca tggcctatgt
      601 cgccgtggcg acggacccca atgcacccgg cggtcagcgg caggtcggtg tgtgccgcta
      661 cgccggcgcc gacgacgcaa cgggagccga gatctcggtc gccgtggccg acgactggca
      721 agatcgcggt ctcgggaaac tgttgcttcg gcggctgatc gagcatgccc gcacgcacgg
      781 tgtccgtcgg ctgtactcga tggactccgc cgccaacgag ccgatgcgcc gcctcgcccg
      841 cgacgtcgga ttccgcgagc agccggatcc cgacgacatt cgccaggtca tctattcgtt
      901 gcagccatag ttcggctagg tacatccacg tatccccgag ctccggcagc gtctcgataa
      961 tccgccggta gtccaaccca cctcaggagc acaatcatgg ctatcggaga cctggttcct
     1021 tggcgctggg gcagcctgcg ccgtttcgac gacgacaaat ccttcgccac gttccgttcg
     1081 gagatggagc agctgcaccg tagcatcgat cgcttattcg ccgatgcctg gggcggcgcg
     1141 gttcccggct cgctactgtc cgacaccgcg atcaccggaa ggatcactcc gcgcctcgac
     1201 gtaacggagg acgacaaagc ctttcacgtg accgtcgagc tacccggcat gaccgacaag
     1261 gacgtggcgg tgtcggtcac ggatcgcgcg ctgacgattc gcggcgagaa gaaggaagag
     1321 aaggagacga aggacaagga cgtgtatcgc cgcgagcgcg cctacggctc gttccgccgc
     1381 gagatcgagt tgccgagcga cgtcgatgcc ggcaagatcg aagcggcgtt caagagcggc
     1441 gttttgacaa tcgacctgcc gaagaccaag gaagcacagg atcgcgtcaa gcagattccc
     1501 gtcaaagcag cgtgaaaact cgtagcagcg cgcccgcttg agggcgcgct gcctaccacg
     1561 cgagtgcggc gtcgatgcgt gcagaggtaa tgaccatgag aaacactttc ctcggagcag
     1621 ccctgacgct cgcagcgatc ggcagtaccg cgcacgccgc cgatgacgac ctgggcgcgc
     1681 ggctcttcct caaccactgt gcggcctgcc acggctacga agccgagggc ggcgggcccg
     1741 tcgcggcgac gatgcgcgtg agcatgccga acctgcggac gctggcgcaa cgcaacaacg
     1801 gagttttccc gaccgatgac gtcaccgcct acgtcgacgg ccgtgagatc aaccccgcgc
     1861 acggcgaccg gcagatgccg atctggggcg acgtgttccg cggcaaagat cagggcacgg
     1921 ctgagcgcac ggtgaggcgg agaatcgccg cggtcgtgga attcatcgag gctctgcagt
     1981 accgctaggc gcagcccggt cgccgatctt gtcgatcgca tgcacgagct cggccagcga
     2041 gcgcatcttg agcttacgca tcactcgcgc ccgatggagc tcgacggtgc gttgactgac
     2101 gcccaggtcc atcgcgatca ccttgtttgc ctggccgcgg acgacgcgct gcatgacttc
     2161 gttctcacgc ggcgtgagaa gagcgatgcg cgcacgaatc gcgtctcgtt ccgtccgcga
     2221 tgtgcgactc tcgcggtcgc gatcgagccc cttgtgtatg cgatcgatga gatcctggtc
     2281 gcgaaacggc ttctggatga agtccgctgc accggatttc atcgccgtca cggccatcgg
     2341 gacgtcgcca tggccggtga tgaagatgat cggaatctcg gcgccctgct cgttcaggcg
     2401 ctgctgcagc tccaggccgc tcagcccggg catgcggatg tcggcaacga gacacgcgtg
     2461 acgccgcgga tcgtaatgct gcaggaaatc caacgccgac gcgtacgact cgtgcttcag
     2521 cccgatcgac ttgaacagca tcccgagcga atcccggacc gcctcgtcgt cgtcgacgag
     2581 ataaaccatg ggaacatcgt tgttgacggt cactcagcac ccctgtccgg cggcagctcg
     2641 acgatgaaga tcgacccacc gcggggattg tccgagtagg tcaggctacc gtgacaagat
     2701 tggacgatgg tcttgcttat cgcaaggccc acgccgagcc catcgtgctt cgtcgtcacg
     2761 aacggatgga agatgtggtc tcccagctgg cgcgatacgc catgcccgtg atccgtgaca
     2821 ctgatcctga cgccaccgct ctcactgcgc tccgtcgcga tgatgattcc gcgctccttg
     2881 ccgagcccgc cccgcatcgc atccacggag ttccgtgtga ggttcagcaa aacctgttgc
     2941 agctgcaccg cgtccgcgcg aacgttgggt aacccttcgc cggcgtccac gcgcacggga
     3001 attccctccg agcgtgcgtc ggcctcgatg aggctcatga cgtcctcgat cactcggttc
     3061 acgttcagcg actgtgtatc gacgtcctgc ttgcggatga acttgcgcag gttgtcgatg
     3121 acctggcccg cgcgacgggc ctgctcgtcc atcttggcgc agatttccgt gagcatcgcg
     3181 gtatcgaggt ccgggcgctg tatcaggcgt tttgccgcct gcgagtacgt cgcgatcgcc
     3241 gaaaggggtt gattgatctc gtgagcgatg ccggcagcca tctcacccat caggttgaac
     3301 cggcccacat gagcgagccg gacttcgagc gcccgcgtgc gctgctccgc ggctcgttga
     3361 gcggacagat cccgaatgat cccgacgaaa cggcgttgcc cgtcgctcaa ggcgtcgccg
     3421 acggccaacg acacggggaa cagctcgcca t
//
LOCUS       DATCUD010000331         4530 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45789, whole genome shotgun sequence.
ACCESSION   DATCUD010000331 DATCUD010000000
VERSION     DATCUD010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4530)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4530)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4530
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45789"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1319
                     /locus_tag="VIQ99_04835"
     CDS             159..1319
                     /locus_tag="VIQ99_04835"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182502.1"
                     /translation="MLPVYVPSLLMAVSHEALTILLPLYLLEIGASPALAALAVGLRG
                     VGVLLFDVPAGMLVAKFGDKPVLLGGLALILGGLVLLAVTTQVWLIAFAALALGTGHA
                     AWMLGRQAYLADVCAPPELGRAIAAMAGLQRGGALIGPLAGGVLAGVAGYPVAFAVGA
                     SFAVVAGATVLVFARAVPPHENPDASLAGTLQVLRTQSRVLATAGGGALVLQAMRATR
                     QVLVPLFGQAVGLDVTVIGLVYSLSTVVDIALFYPSGVLADRFGRKWSAVPSMGLYAL
                     GLALLPLVSGFYSLLAVAVLLGFANGIGTGVVMIIGADLARASGRRGQFLGLWRLIGD
                     VGMSGAPLLVGTIVGSAGLAAASLAAAALGVAGTIVMALVVRETLEGGHAQS"
     gene            1306..2205
                     /locus_tag="VIQ99_04840"
     CDS             1306..2205
                     /locus_tag="VIQ99_04840"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEY9182503.1"
                     /translation="MRRVDLYGAVAFGLLWGGSTAYLGATGADWTFPFIALGIFAIGL
                     SAIAWLTTRGAKTVAPEIRRPSLESVALLVYLALYAILFLGYGMSALRDIPAGRSQEL
                     VVVGAKLLVHVVLPAVLLLALGAKLKPLVKSQLPSRQFWLTFVVLGAIITALLAVLSP
                     SLSEIGAVSPSLATLAWAAPASFVWLAVEAGLNEEFLFRGVLQPRLSAWAKSDVTGIA
                     VTSVIFGLAHAPGLFLRGGPGVDGWSSDPVQVIAFTIATLAPLSVFFGFLYARTRSLL
                     LCVLLHAAVDFLPNMAEFLRIWG"
     gene            2293..2766
                     /locus_tag="VIQ99_04845"
     CDS             2293..2766
                     /locus_tag="VIQ99_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012843096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9182504.1"
                     /translation="MLELNVNGTTHSVDVDPATPLLWVIRDSLGLTGTKFSCGIAQCG
                     ACTLHVDGQPVRSCSFPVSLGVGKKITTIEGVSSDGNHAIQRAWKELDAPQCGYCQSG
                     MIMSALALLTKNPEPTDADIDAAVTIACRCSSYHRVRQAIHLAARFMQTDRARRA"
     gene            2763..>4530
                     /locus_tag="VIQ99_04850"
     CDS             2763..>4530
                     /locus_tag="VIQ99_04850"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9182505.1"
                     /translation="MTKDPQQPGLDRREFLAASGAAFVLGFWLPPRAAAQTAPERGAS
                     WYTEPANPEINAWIVVDPDDTVVIRIAQTELGQGVWTSNAMMVCEELQCDWSKVRPIY
                     ASANRDAREMAPAWTLDVPGNGATDPLGGGEPTFGNRARTGGFGIPDSLYRRMRTNAA
                     SSVKDGRYYLQLAGAEARERLMLAAANLWGVDVHELTARDSVITHSASGRTTTYGKVA
                     HLAARTPHPNPEAIAIKPPDQWTLMGTEQKNLDIAMKVTGETKYAIDVQLPGMKWAAV
                     KTCPVYGGDVKSYDFAAIRDTPGVRGAMQFPIPDPKLTRGRVFSGGVAVIADSWYQAK
                     TALDALPIEWTVPPERAAFSTAGMRAALENALNEPGRVRVNQGDVDAVFARAERVVEA
                     TYYTPYLPRARMEPGNATVLVTDDRVDIWIGDQSPQETRFSAAQITGIREENVYLHMC
                     HLGGGFGRNGNGPQAEQAIMIANAHRGTPIHLLWTREEDFIGTTYRAMGMARLKAALD
                     ADGWPLALEVRTAMQQDGFGPDASFDIASRYYVPSYRFSNHTTQFHVPVGTRRGVGQA
                     AHEFYRESFIDELAHAADKDPYL"
BASE COUNT          639 a         1508 c         1608 g          775 t
ORIGIN      
        1 gggcggcgct ccatcgtcgg tcttggacat gagcgcaagg atcgcgagac ctgccaaggt
       61 tttcaacccg acgcagtgcc gcccgatcgg tatgatgggc ggcgttcgca tcgaccggcg
      121 gtcaagccct gaaacttcca cccccgtacg atcgtctgtt gctgccggtc tatgtgccgt
      181 cgctgctgat ggccgtgagc cacgaggcgc tcacgatcct gttgccgttg tacctgctcg
      241 agattggcgc cagcccggcg ctggcggcgc tcgcggtcgg gctgcgcggg gtcggcgtgc
      301 tgctgttcga cgtgccggcc ggcatgctcg tcgccaagtt cggcgacaag ccggtgttgc
      361 tcggcgggct cgcgttgatc ctcggcggcc tcgtgttgct cgccgtcacg acgcaggttt
      421 ggctgatcgc gttcgccgcg ctcgcgctcg gcaccggcca cgccgcatgg atgctggggc
      481 ggcaggcgta tctggccgat gtctgcgcgc caccggagct cggccgcgcg atcgctgcga
      541 tggcggggct ccagcgcggc ggcgcgttga tcggcccgct cgcgggcggc gtgctcgccg
      601 gtgtcgcggg ctatcccgtc gcattcgcgg tcggtgcctc gttcgccgtc gtggccggcg
      661 cgaccgtgct cgtgttcgct cgcgcggtgc cgccgcacga gaatcccgac gcgagcctcg
      721 cgggcacgct gcaagtgctg cgcacccaga gccgcgtgct cgcgaccgcg ggcggcggcg
      781 cgctcgtgct gcaggcgatg cgcgcgacgc ggcaggtcct cgtgccgctg ttcggccagg
      841 ccgtggggct cgacgtcacc gtgatcggcc tcgtgtactc gctgtcgacg gtcgtcgaca
      901 tcgcgttgtt ctatccgtcg ggcgtactgg ccgatcgctt cggccgcaag tggagcgcgg
      961 tgccgagcat gggcttgtac gcgctcgggc tcgccttgct gccgctcgtc tcggggttct
     1021 attcgctgct cgcggtcgcc gtgctgctcg gcttcgcgaa cggcatcggg accggcgtcg
     1081 tgatgatcat cggcgccgat ctcgcgcgcg cgagcgggag gcgtggccag ttcttgggac
     1141 tgtggcgttt gatcggagac gtcggcatga gcggcgcgcc gctcctggtc ggcacgatcg
     1201 tcggctccgc gggcctcgcg gccgcgagcc tcgcggcggc ggcgctcggc gtggccggca
     1261 cgatcgtcat ggcgctcgtc gtgcgtgaaa cgttggaagg cgggcatgcg cagagttgat
     1321 ctctacggtg ccgtcgcgtt cggcctcctc tggggcggct cgacggccta tctcggcgcg
     1381 acgggtgccg attggacgtt tccgttcatc gcgctcggga tcttcgcgat cgggttgtcc
     1441 gcgatcgctt ggctcacgac gcgtggcgct aaaaccgtgg cccccgagat ccgcagaccc
     1501 tcgctggaaa gcgtcgcgct gctcgtctat ctggcgctct acgcgatcct gttcttgggt
     1561 tacggcatga gcgcgctgcg cgacattccc gccggccgat cgcaggagct cgtggtggtc
     1621 ggagcgaagc tgctcgtcca cgtcgtattg cctgcggtgt tgttgctcgc gctcggcgcg
     1681 aagctgaagc ccctcgtgaa atcgcagctg ccgtcgcggc agttctggct cacgttcgtc
     1741 gtgctgggcg cgatcatcac ggcgctgctg gctgtcctct cgccgagctt gagcgagatc
     1801 ggcgcggtga gcccgagcct cgcgacgctc gcctgggcgg cgccggcaag cttcgtctgg
     1861 ctcgcagtcg aggccggtct caacgaagag ttcctgtttc gcggcgtgct gcagccgcga
     1921 ctgtcggcct gggcgaagtc cgacgtcacc ggtatcgccg tgacgtcggt catcttcggg
     1981 ctcgcgcacg cgcccggcct gttcctgcgc ggtgggcccg gcgtcgatgg ctggtcgagc
     2041 gatcccgtgc aggtcatcgc gttcacgatc gcgacactcg cgccgctcag cgtgttcttc
     2101 ggctttctgt acgcgcgtac acgcagcctg ttgctgtgcg tcttgctgca cgcggctgtc
     2161 gactttctgc cgaacatggc ggagtttctg cggatctggg ggtagccgag ggcgttcgcg
     2221 gcgagtgctg ttgcgcatgg tcggcaccgg tgttagacct tgtctggcac gacggcacgg
     2281 ggggtccgaa tggtgttgga attgaacgtt aacggcacga cgcattccgt cgacgtcgat
     2341 ccggcgacac cattgctgtg ggtgatccgc gattcgctgg ggctcacggg cacgaagttc
     2401 agctgcggta tcgcgcaatg cggcgcgtgc acgctgcacg tcgacgggca gcccgtgcgc
     2461 tcgtgcagct tcccggtctc gctcggggtc ggcaagaaga tcacgaccat cgaaggcgtg
     2521 tcgagcgacg gcaaccacgc gatccagcgc gcgtggaagg agctcgacgc gccgcaatgc
     2581 ggttattgcc agtcgggcat gatcatgagc gcgctcgcgc tgctgacgaa gaatccggag
     2641 ccgaccgacg ccgacatcga cgccgcggtc acgatcgcgt gccggtgctc gagctatcat
     2701 cgggtgcgcc aggcgatcca cctggccgcg cgcttcatgc agaccgatcg cgcgaggcgc
     2761 gcatgacgaa ggacccgcag cagccgggcc tcgatcggcg cgagttcctg gccgcgagcg
     2821 gcgccgcgtt cgtgctcggt ttctggctgc cgccgcgcgc ggccgcacag acggcgccgg
     2881 agcggggcgc atcgtggtac acggagcccg caaaccccga gatcaacgcg tggatcgtcg
     2941 tcgaccccga cgacacggtc gtgattcgga tcgcccagac cgagctcggc caaggcgtat
     3001 ggacctcgaa cgcgatgatg gtctgcgagg agctccagtg cgattggagc aaggtgcggc
     3061 ctatctacgc atccgcgaat cgcgacgcgc gcgagatggc ccccgcttgg acgctcgacg
     3121 tgcccggcaa cggtgcgaca gatccgttgg gcggcggcga gccgacgttc ggcaaccgtg
     3181 cgcgcaccgg cggtttcggc attcccgaca gcctctatcg gcgcatgcgc acgaacgcgg
     3241 cgtcgtcggt caaggacggc cgctactatc tgcagctcgc gggcgccgag gcgcgcgagc
     3301 gcctgatgct ggcggccgcg aacctctggg gcgtcgacgt gcacgagctc acggccaggg
     3361 acagcgtgat cacgcactcg gcgagcggcc gcacgaccac ctacggcaag gtcgcgcacc
     3421 tcgcggcgcg cacgccgcac ccgaatccag aagccatcgc gatcaagccg cccgaccaat
     3481 ggacgctgat gggcaccgag cagaagaacc tcgacatcgc gatgaaggtc acgggagaga
     3541 cgaagtacgc gatcgacgtg cagctgcccg gaatgaaatg ggcggccgtg aagacgtgcc
     3601 ccgtgtacgg tggggacgtg aagagctacg acttcgccgc gattcgcgac acgcccggcg
     3661 tgcggggcgc gatgcagttc ccgatcccgg atccgaagct cacgcgcggc cgcgtgttca
     3721 gcggcggcgt ggccgtgatc gcggactcgt ggtaccaggc gaagaccgcg ctcgacgcgc
     3781 tgccgatcga gtggaccgtg ccacccgagc gcgccgcatt cagcaccgcc ggcatgcgcg
     3841 cggcgctcga gaacgcgctc aacgagccgg gtcgcgtccg cgtgaatcaa ggcgacgtcg
     3901 acgccgtgtt cgcgcgggcg gagcgagtcg tcgaagccac gtactacacg ccgtacttgc
     3961 cgcgtgcgcg catggagccc ggcaacgcga ccgtgctcgt gacggacgac cgcgtcgaca
     4021 tttggatcgg cgaccagagc ccgcaggaga cgcgcttcag cgccgcacag atcacgggca
     4081 tccgggaaga gaacgtctat cttcacatgt gccacttggg cggtgggttc ggtcgcaacg
     4141 ggaatggccc acaagcagag caggcgatca tgatcgcgaa tgcgcaccgt ggcacgccga
     4201 tccatctgct ctggacgcgc gaggaggact tcatcggcac gacctaccgc gcgatgggca
     4261 tggcgcgcct gaaagccgcg ctcgacgcgg acggctggcc gctcgcgctc gaggtccgta
     4321 ccgcgatgca gcaggacggt ttcggccccg acgcgtcgtt cgacatcgcg tcgcgctact
     4381 acgtgccgag ctaccggttc agcaatcaca cgacgcagtt ccatgtgccg gtcggcacgc
     4441 gccgcggcgt cggccaggcc gcgcacgagt tctaccgcga gagcttcatc gacgagctcg
     4501 cgcacgcggc ggacaaggat ccgtacctgt
//
LOCUS       DATCUD010000332         2027 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59883, whole genome shotgun sequence.
ACCESSION   DATCUD010000332 DATCUD010000000
VERSION     DATCUD010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59883"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="VIQ99_04855"
     CDS             <1..523
                     /locus_tag="VIQ99_04855"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9182506.1"
                     /translation="VAKDNLPITASPAAFVAGFAEIELDTETGAFEIKDYVAVADCGT
                     VIHPMGLATQIKGGAVMGFGLATLERHVYDPQNGLPGAVGFYQAKPASYLDVAQTFTT
                     DGVDLPDPQSPLGTKGVGEPVMGAGASALLCAISDALGGHYFNRVPVTRDHIVNALAG
                     RPQSHKPLQVNTA"
     gene            complement(561..881)
                     /locus_tag="VIQ99_04860"
     CDS             complement(561..881)
                     /locus_tag="VIQ99_04860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182507.1"
                     /translation="MARERRKGGRRRTDKQPTRDTSVTLTNERSTGTIEHDERGDARW
                     VSASERQARDTAETFDELKALDNDTLEILELTDAPRQKSPPGGGYNPYDISTPSKRAG
                     KTRR"
     gene            1051..>2027
                     /locus_tag="VIQ99_04865"
     CDS             1051..>2027
                     /locus_tag="VIQ99_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9182508.1"
                     /translation="MELRNHKISREFWLSLVVVGACAIARADAQPAAATDARVEPRAV
                     MPRGPLSADERNTIAVFESVSPSVVYITTAQYVRDFFSPNVMRVPQGTGSGFVWDERG
                     RVITNYHVIRGAQEATVRLGDQRSFQARLVGASPEHDIAVLEIDVPGDFPPPIPIGSS
                     TDLRVGQTVLAIGNPFGLDHTLTTGIVSALNRTVENEVGGQIENVIQTDAAINPGNSG
                     GPLIDSAGRLVGINTMIYSPSGAYAGIGFAVPVDTINRVVPRLIAYGNYVRPTLGISI
                     DDAVSRRLVGREALNGVLVLGVSEGSPAARAGLRATQIAASGRVTLGDV"
BASE COUNT          304 a          678 c          681 g          364 t
ORIGIN      
        1 cgtcgcgaag gacaacttgc cgatcacggc gtcgcctgcg gcgttcgtcg ccggctttgc
       61 cgagatcgag ctcgacaccg aaacgggcgc gttcgagatc aaggactacg tggccgtcgc
      121 cgattgcggc acagtgatcc acccgatggg tctcgcgacg cagatcaagg gcggtgccgt
      181 catgggcttc ggtttggcga cgctcgagcg ccacgtctac gatccgcaaa acggtttgcc
      241 gggcgccgtc ggtttctatc aggcgaagcc tgcgagctat ctcgacgtcg cgcagacgtt
      301 cacgacggat ggcgtcgatc tgcccgaccc gcagagtccg ctcggcacga aaggtgtcgg
      361 tgagccggtc atgggcgcgg gcgcgtcggc gctgctgtgc gcgatctcgg atgctctcgg
      421 cgggcattat ttcaaccggg tgccggtgac gcgcgaccac atcgtgaatg cgttggccgg
      481 tcggccgcag tcgcacaagc cgttgcaggt caacacggcc tgaggagctc gcgcacctcg
      541 cgcgcgattc ggagtgccga tcagcggcga gtcttgcccg cgcgtttgct cggcgtgctg
      601 atgtcgtagg ggttgtagcc gccgcccggc ggcgacttct gccgaggcgc gtccgtgagc
      661 tcgaggatct cgagcgtgtc gttgtcgagc gccttcagct cgtcgaacgt ttctgccgtg
      721 tcgcgcgctt gccgctcgct ggccgacacc cagcgcgcat cgccgcgctc gtcgtgctcg
      781 atggttcccg tgctccgctc gttcgtcaac gtgacggagg tgtcccgcgt cggctgttta
      841 tcggtgcgcc ggcgcccgcc tttgcgtcgc tccctggcca tagttccaga tttcgaactg
      901 attacgtcgt atacgttaac gcgacggcag cgcccaaaac gcgaaccatt tcgcactccg
      961 ccccgcgatc gggcggcggc gacggcgttg tgacggaccg ctcgcccggc taggctattc
     1021 aacgtagttc gttgtcacat tcgctcctgc atggaactgc gtaaccacaa gatttcacga
     1081 gaattttggc tttccctggt cgtggtcggc gcctgtgcga tcgcgcgtgc ggacgcgcaa
     1141 cccgctgcgg cgacggacgc tcgcgtcgaa ccgcgcgcgg tgatgccgcg cgggccgttg
     1201 tcggccgacg agcgcaacac gatcgccgtg ttcgagagcg tgagcccctc cgtcgtgtac
     1261 atcacgaccg cgcagtacgt tcgcgacttc ttcagcccca acgtcatgcg cgtgccgcag
     1321 ggcacgggct cggggttcgt ctgggacgag cgcggtcgcg taatcacgaa ctaccacgtc
     1381 attcgcggcg cgcaggaggc cacggtcagg ctcggcgatc agcgcagctt ccaggcgcgg
     1441 ctcgtcggcg cgagcccgga gcacgacatc gccgtgctcg agatcgacgt gcccggggac
     1501 ttcccgccgc cgatcccgat cggtagcagt acggacctgc gcgttgggca gaccgtgctc
     1561 gcgatcggga atccgttcgg cctcgatcac acgctgacga cgggtatcgt ctccgcgttg
     1621 aatcggaccg tcgagaacga ggtcggcggc cagatcgaga acgtgattca aaccgacgct
     1681 gcgatcaatc ccggcaactc cggagggccg ctgatcgaca gcgccggccg gctcgtcggc
     1741 atcaacacga tgatctacag cccgtcggga gcgtacgccg gcatcgggtt cgccgtaccg
     1801 gtcgacacga tcaaccgcgt cgtgcctcgg ctgatcgcct acggcaacta cgtgcgcccg
     1861 acgctcggca tctcgatcga cgacgcggtg agccgtcggc tcgtcggccg cgaggccctc
     1921 aacggcgtgc tcgtgctcgg cgtgtcggaa ggctcgccgg cggcgcgcgc ggggctccgg
     1981 gccacgcaaa ttgccgcgag cggccgagtc acgctcggcg acgtcat
//
LOCUS       DATCUD010000333         1663 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24698, whole genome shotgun sequence.
ACCESSION   DATCUD010000333 DATCUD010000000
VERSION     DATCUD010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24698"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1583
                     /gene="sdhA"
                     /locus_tag="VIQ99_04870"
     CDS             <1..1583
                     /gene="sdhA"
                     /locus_tag="VIQ99_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEY9182509.1"
                     /translation="RWHMYDTVKGSDWLGDQDAIEYMCKEAPASVIELEHYGVPFSRT
                     EDGRIYQRPFGGMTTEFGKGIAQRTCAAADRTGHAMLHTLYQQSLKHSAEFFIEYFAI
                     DLIMENGACRGVVALDMATGRLHRYRAQIVILATGGYGRAYFSCTSAHICTGDGNAMA
                     LRAGLPLEDLEFVQFHPTGVYGAGMLITEGSRGEGGYLTNSEGERFMERYAPNAKDLA
                     SRDVVSRSITMEIRGGRGVGKHKDHVHLHLEHLGRDVIDERLPGIRETAKIFAGVDVL
                     KAPIPVLPTVHYNMGGVPTNYHGEALTLDSSGKDRVVPGLMAIGEAACVSVHGANRLG
                     SNSLIDLVVFGRAAAQRCGEVVERGVRSKAFAPGAGDEAVARLDRLRNAKGKTPTAKI
                     RLDMQRVMQDHAAVFRTGESLQEGITKLEQVFASFADVGVTDRSLIWNTDLVETLELD
                     NLLLQAMGTIKSAANRTESRGAQAREDYPERDDVNWLKHTLAWVDANGAVRFAYRPVT
                     MTTLTDEVKPIPPKARTY"
BASE COUNT          300 a          514 c          578 g          271 t
ORIGIN      
        1 ggcgttggca catgtacgac acggtcaagg gctccgactg gctcggagat caagacgcga
       61 tcgagtacat gtgcaaagaa gcgccggcat ccgtgatcga gctcgagcac tacggcgttc
      121 cgttctcgcg cacggaggac ggccgcatct atcaacggcc gttcggcggc atgacgaccg
      181 agttcggcaa aggcatcgcg cagcgcacgt gcgcggccgc ggaccgcacc ggccacgcga
      241 tgctgcacac gctgtatcag cagtcattga agcactcggc cgagttcttc atcgagtact
      301 tcgcgatcga cttgatcatg gagaacggcg cctgccgcgg cgtcgtcgcg ctcgacatgg
      361 cgacgggccg gctgcatcgc tatcgggctc agatcgtgat tctcgcgacg ggcggctacg
      421 ggcgcgccta tttctcgtgc acgtcggcgc acatctgcac cggcgacggt aatgcgatgg
      481 cgttgcgcgc ggggttgccg ctcgaggatc tcgagttcgt gcagtttcac ccgaccggcg
      541 tctacggggc cggaatgctg atcacggagg gctcgcgcgg tgagggcggt tacctcacga
      601 actcggaagg cgagcgcttc atggagcgct acgcaccgaa cgcgaaggat cttgcgtccc
      661 gcgacgtcgt gagccgttcg atcacgatgg agatccgggg cggccgcggc gtcggcaagc
      721 acaaggatca cgtgcatctg cacctcgagc atctcggtcg cgacgtcatc gacgagcggc
      781 taccgggcat ccgcgagacg gcgaagatct tcgccggcgt cgacgtgttg aaggcgccga
      841 tacccgtgct gccgacggtg cactacaaca tgggcggggt gccgaccaac tatcacggcg
      901 aagctttgac gctcgacagc agcggcaagg atcgagtcgt gcccggcttg atggcgatcg
      961 gtgaggctgc gtgcgtgtcc gtgcacggag cgaaccggct cggctcgaac tcgttgatcg
     1021 acctcgtcgt gttcggccgc gcggcggcac agcgctgcgg cgaggtcgtc gagcgcggcg
     1081 tgcggtcgaa agcgttcgcg ccgggcgccg gcgacgaagc ggtggcccgc ttggaccggc
     1141 tgcgcaacgc gaagggcaag acgcccacgg cgaagatcag gctcgacatg caacgcgtga
     1201 tgcaggatca cgcggccgtg tttcgtaccg gcgagtcgct gcaggaaggc attacgaagc
     1261 tcgagcaggt cttcgcttcg ttcgccgatg tcggcgtgac cgaccgcagc ctgatctgga
     1321 acaccgatct cgtcgaaacg ctcgagctcg ataacctgtt gctgcaggcc atgggcacga
     1381 tcaagtcggc ggcgaatcgc accgagagcc gcggcgcgca ggcgcgcgag gactaccccg
     1441 agcgcgacga cgtgaactgg ttgaagcaca cgctggcctg ggtggatgcg aacggtgccg
     1501 tccgcttcgc ctaccggccc gtcaccatga ccacgctgac ggacgaggtc aaaccgatcc
     1561 ctccaaaggc gcgcacgtat tgatgagcga gtggaagtag atagaacggc ttccggaggt
     1621 gccccgtgtg atgggcgttt ccgggacgct cgcgcgcagg gat
//
LOCUS       DATCUD010000334         3262 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3469, whole genome shotgun sequence.
ACCESSION   DATCUD010000334 DATCUD010000000
VERSION     DATCUD010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3469"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VIQ99_04875"
     CDS             complement(<1..230)
                     /locus_tag="VIQ99_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013723237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY9182510.1"
                     /translation="MKVAAIQMTSTRDVQANLREADRLLEEAAHRGAKLAVLPENFSF
                     LGATDADRVAAIEAFGDGPAQRFLSDAARRYEL"
     gene            complement(235..>3262)
                     /locus_tag="VIQ99_04880"
     CDS             complement(235..>3262)
                     /locus_tag="VIQ99_04880"
                     /inference="COORDINATES: protein motif:HMM:TIGR02099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YhdP family protein"
                     /protein_id="HEY9182511.1"
                     /translation="LAVDSHYERIALSGDWQHTNDSWRFAFRDIAVRRGGRAWPEDTS
                     VELDIAREPDGTERFALRSTFLRLEDLTPFVAPLPESRLLESWLTLQPRGDLRAVDVT
                     VERSVDERTDYTVSGEFAGLGMRPFEGLPGLTGLTGQVRADSRTGRVELASIEVGLDW
                     QTLFRTPLDVSELRGILVWRTGQDAVRLVSDDLVITTPDATLRSNLELTLPMDGTSPV
                     LDLDTDVSPFDIAVAPRYLPANKMPPGVVAWLDSALRGGRATSAQVSFVGPVQAFPFD
                     GDEGEFRATLEVEDTELAFVRDWPTAQDLAGTVEFVNARFEARGSGRMLGNRTENLVV
                     GFDDLRTGELTVRSNTTGGLDQVLAFLNGAPMIRGYLGQDFARLEASAGTGDVALDLM
                     VPLRNRSAYRLTAGLTIAGGDIGYRGFPPHVTEVFGSLLLADGVLRGQGVQGIFLDGP
                     VTATVDAAGVPGYRARIDFDGEVTIDAVVDAFDLPYGELMAGQAAWRGSLLIPSGPST
                     ESSPAKVTIDSNLSGVALRFPEPFAKPPGVPTNLELAIAFPPSGLTMAGNLGATRRFA
                     LDFDAVSGQERPFKFRRAALEFGGELAEFRADSGVTLNGSLPVLRGDDWVALLKQSAG
                     NASSGAGWSGVFAGADLDVADFSVFGQQLGSSRLTARRRTDDWQLDIESDAIAGTLLV
                     PIDLEADPQIVAVMRRVYLNPGDGSGAASDLDPRDLPGLQLHADEFGIGQRQLGRLDA
                     EILSDPLGLRLVSFESATDAFSAQGSGGWFMGEDGDTTRFAVSINSTNVGQMLSQLGF
                     APFVEAESAEITASLFWPGPPSGSWLDHMGGDLALRVETGSLVDVQPGGAGRAAGLLS
                     ISALPRRLALDFRDVFNRGLVFDDITADFVIVDGNTYTDNLKLTGPVAEVGLIGRTGF
                     RDHDYTQQAVVTAEPGKVLPTVGALLAGPQVAAALLLFTRIFKKPLGGIGRASYCVTG
                     TWQEPVVERLTDEQLEQGSLCAEMAPNRPLPPAGEN"
BASE COUNT          550 a         1173 c         1069 g          470 t
ORIGIN      
        1 agctcgtaac gccgagccgc atccgagagg aatcgttgcg cgggaccgtc gccgaacgcc
       61 tcgatggccg cgacgcgatc cgcgtcggtc gcaccgagga acgaaaagtt ctcggggagc
      121 acggcgagct tcgcgccccg gtgcgcggcc tcctcgagca ggcgatcggc ttcgcgcagg
      181 ttcgcctgca cgtcacgcgt gctcgtcatc tggatcgcgg cgactttcat tccgtcagtt
      241 ctcgccggcg ggcggcagcg gtcggttcgg cgccatctcc gcgcacaacg acccctgctc
      301 gagctgctcg tccgtgagcc gttcgacgac cggctcctgc caggtgcccg tcacgcaata
      361 cgacgcgcgg ccgatgccgc cgagcggttt cttgaagatc cgcgtgaaca ggagcagcgc
      421 cgcagcgacc tgcggacccg caagcagcgc tccgaccgtg ggcagcacct tgccgggctc
      481 ggccgtcacg acggcctgct gggtgtagtc gtggtcgcga aaccccgtgc ggccgatcag
      541 accgacctcg gcgaccggac ccgtgagctt caggttgtcg gtgtaggtgt tgccgtcgac
      601 gatcacgaaa tcggccgtga tgtcgtcgaa gacgaggccc cgattgaaca catcgcgaaa
      661 atccagcgcg agccgccgcg gcagtgcgct gatcgacagg agcccggccg ctcgtcccgc
      721 gccaccgggc tggacgtcga cgagactgcc ggtctcgacg cgcaacgcga ggtcgccacc
      781 catgtggtcg agccacgagc ccgacggtgg gccgggccag aacaggctgg ccgtgatctc
      841 ggccgattcg gcctcgacga acggcgcgaa gccgagctga ctcagcattt gaccgacgtt
      901 cgtcgagttg atgctgaccg cgaagcgcgt cgtatcgccg tcttcgccca tgaaccatcc
      961 gccgctgccc tgcgccgaga acgcgtccgt cgcgctctcg aacgagacga gccgcaggcc
     1021 gagcggatcc gacaggattt ccgcgtcgag ccgcccgagc tggcgctggc cgatgccgaa
     1081 ctcgtccgca tgcagctgca aacccggcag gtcgcgcggg tcgaggtcgc tcgccgcgcc
     1141 cgagccgtcg ccggggttca agtagacgcg ccgcatcacg gccacgatct gcggatcggc
     1201 ctcgagatcg atcggcacga gcagcgtgcc tgcgatcgca tcgctctcga tgtcgagctg
     1261 ccagtcgtcg gtgcgccgtc gcgccgtgag ccgcgagctg ccgagctgct gcccgaacac
     1321 cgagaagtcc gcgacgtcga gatctgcgcc cgcgaacacc ccgctccagc ccgccccgct
     1381 gctcgcgttg cccgccgatt gcttcagcag cgccacccaa tcgtcgccgc gcaacaccgg
     1441 cagcgaaccg ttcaaggtca cgccgctatc ggcacgaaac tccgcgagct caccgccgaa
     1501 ctcgagcgcc gcgcgccgga acttgaaagg ccgctcctgc ccggacaccg catcgaaatc
     1561 gagcgcgaag cgccgcgtcg cgccgaggtt tccggccatc gtgaggccgc tcggcggaaa
     1621 cgcgatcgcg agctcgaggt tcgtcggcac gccgggcggt ttcgcgaacg gctccgggaa
     1681 acgcagcgcg acgcccgaca ggttcgagtc gatcgtgacc ttcgcgggcg aggactccgt
     1741 gctcgggccc gacggaatca acaggctgcc tcgccaggcc gcctgccctg ccatcagttc
     1801 cccatacggc aggtcgaagg cgtcgacgac ggcgtcgatc gtgacttcac cgtcgaaatc
     1861 gattcgcgcg cgatatccag gcactccggc cgcatcgacg gtcgcggtga cggggccgtc
     1921 gaggaagatg ccttgcacac cctggccgcg cagcacgccg tcggcgagca acagcgagcc
     1981 aaagacctcc gtgacgtgcg gcgggaatcc acgatagccg atgtccccgc ccgcgatcgt
     2041 gagccccgcc gtgagccgat acgccgagcg attccgcaac ggcaccatca agtcgagcgc
     2101 gacatcgccc gtgccggccg acgcctcgag ccgcgcgaaa tcctgaccga ggtatcccct
     2161 gatcatcggc gcgccgttca agaacgcgag gacttggtcg agcccgccgg tcgtattgct
     2221 ccgcaccgtg agctcgccgg tgcgaagatc atcgaacccc acgaccaggt tctcggtgcg
     2281 attgccgagc atccgcccgc tgccgcgcgc ctcgaagcgc gcattcacga actcgaccgt
     2341 tccggcgagg tcctgagcgg tcggccaatc ccgcacgaac gcgagctcgg tgtcttcgac
     2401 ctcaagcgtg gcgcggaact cgccttcgtc gccgtcgaac gggaaagcct gcaccggacc
     2461 cacgaacgac acttgcgcgc tcgtcgcacg accgccgcgc aacgccgaat cgagccatgc
     2521 gacgacaccg ggcggcatct tgttcgccgg caagtagcgc ggcgcgacag cgatatcgaa
     2581 cggcgagacg tcggtgtcga ggtccagcac cggtgacgtc ccgtccatgg gcaaagtgag
     2641 ctccaaattc gagcgcagcg tggcgtccgg cgtcgtgatc acgaggtcgt cgctgacgag
     2701 ccgtacggcg tcctggcccg tgcgccacac gagaatgccg cgcagctccg agacgtcgag
     2761 cggagtgcgg aacagcgtct gccagtcgag cccgacctcg atgctcgcga gctcaacgcg
     2821 gcccgtgcgc gaatcggccc gcacttgccc cgtgaggccc gtcagtcccg gcaagccctc
     2881 gaacggcctc atgccgaggc cggcgaactc gccgctgacc gtgtaatcgg tccgctcgtc
     2941 gacactccgc tcgaccgtta cgtcgaccgc gcgcaggtcg ccgcgcggct gtagcgtgag
     3001 ccaggattcg agcaggcgcg actccggcaa cggagcgaca aacggcgtca ggtcctcgag
     3061 cctaagaaac gtgctccgca gcgcgaaccg ctcggtaccg tccggctcgc gggcaatgtc
     3121 gagctcgacc gacgtgtcct cgggccacgc gcgaccgccg cgtctgactg cgatgtcgcg
     3181 gaacgcgaaa cgccacgagt cgttcgtgtg ctgccagtct ccggacagcg cgatgcgctc
     3241 gtagtgcgag tcgacggcga gc
//
LOCUS       DATCUD010000335         1899 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24719, whole genome shotgun sequence.
ACCESSION   DATCUD010000335 DATCUD010000000
VERSION     DATCUD010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24719"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VIQ99_04885"
     CDS             <1..724
                     /locus_tag="VIQ99_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182512.1"
                     /translation="APSLFGNPVNPPAHWADHDSPMSPTRRSMVVDPPDGRVPVMKWA
                     EDKRDYDLAHLEDHYVHETPWVRCITRGVPGGMFPAGYNNGYEIIQIPGYVVIAYEMI
                     HDTRIIPLDGRPHVGESIRLWNGDSRGHFEGNTLVVETTNFNDRGVIGTSAATGRIRG
                     IPHSEQLHVVERFTRISEDVINYSATVTDPKVFTAPWTVALPLNRDPNYLMFEYACHE
                     GNLAMPNALRAGRVREQAARAK"
     gene            complement(737..1198)
                     /locus_tag="VIQ99_04890"
     CDS             complement(737..1198)
                     /locus_tag="VIQ99_04890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012487221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182513.1"
                     /translation="MDIGTWELLSYIVTTIGLPLAIFVFLYEQKKERDNEDEEVYQLL
                     SDNYQDFLKIALDHPDLKLFSLERPRELTSEQLEQCLIIFNMLISLFERAYLVLYEPN
                     MSGLQLRRWLSWEDYMREWCKREDFRERLPQLLEGEDPGFRKYISALAARA"
     gene            complement(1271..>1899)
                     /locus_tag="VIQ99_04895"
     CDS             complement(1271..>1899)
                     /locus_tag="VIQ99_04895"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182514.1"
                     /translation="TTDKQLATQTCAPCAPVVVAWFRTVNTGESRNWGVEAEILAEPV
                     ESFRIDFSMGYQNYLVTDLGTAAGLFIYVPDTAPDASIRGDVMYSPRTPEWNLGLGMQ
                     YEFNVGNGATLVPRFDYTWQDDIWFATNPVAGIVNEQDGRQPAYGVVNARVTWTNPDA
                     SWSVSAYAINLTDEYYFYGKLSLLANSGREQGNPAAPREVGLNFRYNF"
BASE COUNT          334 a          624 c          617 g          324 t
ORIGIN      
        1 agcgccgtcg ctgttcggca accccgtgaa tccacccgcg cattgggccg atcacgacag
       61 cccgatgagc cccacgcgtc gctcgatggt cgtcgacccg cccgacggcc gcgtgccggt
      121 gatgaagtgg gccgaagaca aacgtgacta cgatctcgcg cacctcgagg accactacgt
      181 gcacgagacg ccgtgggtcc gctgcatcac gcgcggcgtg ccgggcggca tgtttcccgc
      241 cggctacaac aatggctacg agatcattca gatcccgggc tacgtcgtca tcgcctacga
      301 aatgatccac gacacgcgga tcatcccgct cgacgggcgg ccgcacgtcg gcgagagcat
      361 tcgcctctgg aatggcgact cgcgcgggca tttcgaaggc aacacgctcg tcgtcgagac
      421 gacgaacttc aacgaccgcg gcgtgatcgg cacgagcgcg gccacggggc gcatccgcgg
      481 gatcccgcac agcgagcagc tgcacgtcgt cgagcgcttc acgcgcatca gcgaggatgt
      541 catcaactac tcggccacgg tcaccgaccc gaaggtcttc acggcgccgt ggaccgtggc
      601 gctgccgctg aatcgcgacc cgaattatct gatgttcgag tacgcgtgcc acgagggcaa
      661 tctcgcgatg ccgaacgcat tgcgtgccgg ccgcgtccgc gagcaggccg cgcgcgcgaa
      721 gtagaccggc caggcatcag gcccgtgcgg cgagcgcgct gatgtacttg cgaaagcccg
      781 ggtcctcgcc ctcgagcagc tgcggcagcc gctcgcggaa gtcctcgcgc ttgcaccact
      841 cgcgcatgta gtcctcccac gacagccagc ggcgcaactg gagccccgac atgttcggct
      901 cgtacagcac gaggtacgcg cgctcgaaca gcgagatcag catgttgaag atgatcaggc
      961 attgctcgag ttgctcgctc gtgagctcgc gcggccgttc gagcgagaac agcttgaggt
     1021 ccgggtggtc gagcgcgatc ttcaggaagt cctggtagtt gtccgagagg agctggtaga
     1081 cctcttcgtc ctcgttgtcg cgctccttct tttgctcgta caggaacacg aagatcgcga
     1141 gcggcaagcc gatcgtcgtg acgatgtagc tcaggagctc ccaggtgccg atgtccatgc
     1201 cggtgtcccg tagaaacaaa aggggcgcgt tcgtcgccga acgcgcccct caagtttccc
     1261 accaactacg ctagaagttg tagcggaagt tgaggccgac ctcgcgcggc gcagcggggt
     1321 tgccttgctc gcggcccgag ttcgcgagca gcgacagctt gccgtagaag tagtactcgt
     1381 cggtcaagtt gatcgcgtag gcggacacgg accagctcgc gtccgggttc gtccatgtca
     1441 cgcgggcgtt cactacgccg tacgcgggtt ggcgtccgtc ctgctcgttg acgatgccgg
     1501 cgacggggtt cgtcgcgaac cagatgtcgt cctgccacgt gtagtcgaag cgcggcacca
     1561 gcgtcgcacc gttgccgacg ttgaactcgt actgcatgcc caatcccaag ttccactcgg
     1621 gcgtgcgggg cgagtacatc acgtcgccgc ggatcgacgc gtcgggcgcc gtgtccggca
     1681 cgtagatgaa caggccggcg gccgtgccca ggtccgtgac caggtagttc tggtagccca
     1741 tcgagaagtc gatccggaag ctctcgaccg gctccgcgag gatctcggcc tcgacacccc
     1801 agttgcgcga ctcgccggtg ttgaccgtgc gaaaccacgc gacgacgacc ggggcgcacg
     1861 gtgcgcaggt ctgggtcgcg agctgcttgt cggtcgtct
//
LOCUS       DATCUD010000336         2743 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45842, whole genome shotgun sequence.
ACCESSION   DATCUD010000336 DATCUD010000000
VERSION     DATCUD010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2743
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45842"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="VIQ99_04900"
     CDS             complement(<1..984)
                     /locus_tag="VIQ99_04900"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182515.1"
                     /translation="MNAQSWSRRQVLNGALATGALAAAPLEVSLGQRTGNMTQGELLI
                     RNAYVLTMDAAVGDIANGDVHIRAGTIAAVGRGLQAPGAEVIDAAGMLVLPGLIETHW
                     HVWTTLLRSLAGDAAEHGYFPTSRTVGTFYTAEDMYVAGRLAAAEAVSSGITFVHDWC
                     HNVRGPAYAEAALRALVESGIRSRFSYGSPTGASGDATIDLDDLTRLRERWSDHSNGG
                     LRTLGLAWRGAGSGATLRDYEVAKSLGLPISVHANNFQTSAGGIQQLADRRLLGPGMQ
                     VIHAVWCTPAEIRALADNGVAVSVSPYSEMRIGFGFPIVAELLAAGVTVGLS"
     gene            complement(981..1700)
                     /locus_tag="VIQ99_04905"
     CDS             complement(981..1700)
                     /locus_tag="VIQ99_04905"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY9182516.1"
                     /translation="MSSADIRSKEATGRREMPERGTGNGNGTVSSLVRVLAEGRLKPK
                     AKEQEVLDVATEYFLKHGYLGASINEMARSSGISKESIYRYFSSKQQLFEAVIGRELV
                     EYRRSLDRLDSTLRGMDLRTALITAAEAILAVITTDRTQALRRLIFDEATRSPEIGQH
                     YYKIGPGRAYEVIESVLETHPHRSEFDLPELARHFAALLSWRITLERQCAVRAAPTAA
                     EITGIASTMVDDFMKAFLRPK"
     gene            complement(1715..>2743)
                     /locus_tag="VIQ99_04910"
     CDS             complement(1715..>2743)
                     /locus_tag="VIQ99_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004308006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY9182517.1"
                     /translation="YTRREPVGVVAQIIPWNFPLVMAAWKLGPALAAGCTCVLKPAEQ
                     TPLSALRLGELIVEAGFPPGVVNILTGYGETAGAALVAHPGVDKVAFTGSTLVGKTIN
                     KTATDTLKRVSLELGGKSPVIVLPDADVDTVVGGAAGAIFFNAGQVCAAGSRLYVHRK
                     IFDRVVEGVGGAAQAIRLGPGLDPNTQMGPLVSREQQERVLGYIQSGRAEGASVIAGG
                     DAPTHSGFYVKPTVMADVKRSMRVVQEEIFGPVLVAQRFDDLDEVAALANDTPYGLSA
                     SIWSNDLKAVNRLIPKIRAGTVWVNTHGLVDANMPFGGFKHSGIGREHGRVGIEMYTE
                     VKSVCMLV"
BASE COUNT          463 a          966 c          854 g          460 t
ORIGIN      
        1 ggacaagccg accgtcaccc cagccgccag cagctctgca acgatcggga aaccgaatcc
       61 tatgcgcatc tcggaatacg gagacacgct gaccgcgact ccgttgtcgg ccagcgcgcg
      121 aatctcggcc ggcgtgcacc agaccgcgtg aatcacctgc atgccggggc cgagcagcct
      181 gcggtccgcg agctgctgaa tgccgcccgc gctcgtctga aagttgttcg cgtgcacgga
      241 gatcggcaga ccgaggcttt tcgcgacctc gtagtcgcgc agtgtcgccc ctgagccggc
      301 accgcgccac gcaagaccga gcgtccgaag cccgccgttc gagtggtcgc tccagcgctc
      361 gcggagccgc gtgaggtcgt cgagatcgat cgtggcgtca ccgctcgccc cggtcggcga
      421 tccgtacgag aaacgcgacc ggatacccga ctccacgagc gcgcggagcg cagcctcggc
      481 gtaggccgga ccacgcacgt tgtggcacca atcgtgaacg aacgtgatac cggagctcac
      541 ggcctcggcg gccgccagcc gcccggcaac atacatgtcc tcggccgtgt agaacgtacc
      601 aaccgttcgt gacgtcggga agtagccgtg ctccgccgcg tcgccggcca acgagcgcag
      661 caacgtcgtc cacacgtgcc agtgcgtctc gatcaggccc ggcaacacga gcatgcccgc
      721 cgcgtcgatg acctctgcgc cgggcgcttg caacccgcgg ccgacggccg cgatcgtgcc
      781 ggcgcgaatg tggacgtcgc cgttcgcgat gtcgcccacg gccgcatcca tcgtgagcac
      841 gtacgcgttg cggatcagga gctcgccttg cgtcatgttg ccggtgcgtt gtcccaacga
      901 gacctcgagg ggagccgcgg ccaaggcgcc ggtggcgagc gcaccgttca agacctggcg
      961 cctgctccag ctttgcgcgt tcacttgggc cgcaggaacg ccttcatgaa gtcgtcgacc
     1021 atcgtcgaag cgatccccgt gatctcggcc gcagtcggcg ccgcgcgcac ggcgcactgg
     1081 cgttcgagcg tgatgcgcca cgacagcagc gccgcgaaat gccgcgccag ctccgggaga
     1141 tcgaactcgc tgcgatgtgg gtgtgtctcg agcacgcttt cgatgacctc gtacgcccgt
     1201 cctgggccga tcttgtaata atgctgcccg atctcgggcg agcgcgtggc ctcgtcgaag
     1261 atcagccggc gcaacgcctg cgtgcgatcg gtcgtgatca cggcgagaat cgcctcggcg
     1321 gccgtgatca gtgccgtgcg cagatccatg ccgcgcaacg tcgaatccag tcgatccagg
     1381 ctgcggcggt attcgacgag ctcgcgaccg atgaccgctt cgaacagctg ctgcttgctg
     1441 ctgaagtagc ggtaaatcga ttccttggag atccccgagc tacgcgccat ctcgttgatg
     1501 ctcgcgccga ggtagccgtg cttcaagaaa tactcggttg cgacgtcgag cacttcttgc
     1561 tccttggctt tgggcttgag tcgcccttcc gctagcacgc ggaccaagct gctcaccgtg
     1621 ccattgccat tgccggtgcc ccgctccggc atctcacgtc gccccgtggc ttccttgctg
     1681 cgaatgtctg cagagctcat cgctactccc gaaatcagac gagcatgcac acggatttca
     1741 cctcggtgta catctcgatg cccacacggc cgtgctcgcg gccgattccc gaatgcttga
     1801 agccgccgaa cggcatgttc gcgtcgacga ggccgtgcgt gttgacccat acggtgccgg
     1861 ccctgatctt cgggatcagc cgattcacgg ccttgaggtc gttcgaccaa atgctggcgc
     1921 tcaacccata cggcgtgtca ttcgcgagcg cggccacctc gtcgagatcg tcgaaacgtt
     1981 gcgccacgag taccggcccg aagatctctt cctgaaccac gcgcatcgag cgcttgacgt
     2041 ccgccatgac cgttggcttc acgtagaacc ccgagtgcgt cggagcgtcc ccgcccgcga
     2101 tgaccgaggc accctcggcg cgtcccgact ggatgtagcc gagcacgcgt tcctgctgct
     2161 cgcgcgaaac gagcgggccc atctgtgtgt tcgggtccag ccccgggccg agtcggatcg
     2221 cctgcgccgc gcccccgacc ccttcgacga cgcgatcgaa tatcttccgg tgcacgtaca
     2281 gccgcgaccc cgcggcgcac acctgtcccg cgttgaagaa aatcgcgccg gccgcgccgc
     2341 cgaccacggt atcgacatcg gcgtccggca gcacgatgac cggcgacttg ccgccgagct
     2401 cgagcgaaac tcgcttcagg gtgtccgtag cggtcttgtt gatcgtcttg cccaccagcg
     2461 tcgagcccgt gaacgcgact ttgtccacac cgggatgtgc aacgagcgcg gcgcccgcgg
     2521 tctcaccgta acccgtcaga atgttcacga cgccgggcgg gaaaccggcc tcgacgatca
     2581 attcgcccag acgcagagcg gacagcggcg tctgctcggc gggcttcagc acgcacgtgc
     2641 aaccggccgc caacgccggc cccagcttcc acgcggccat gacgagcggg aaattccacg
     2701 gaatgatctg cgcgacgacg ccgaccggct cgcggcgcgt gta
//
LOCUS       DATCUD010000337         3710 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59942, whole genome shotgun sequence.
ACCESSION   DATCUD010000337 DATCUD010000000
VERSION     DATCUD010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59942"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1686)
                     /locus_tag="VIQ99_04915"
     CDS             complement(<1..1686)
                     /locus_tag="VIQ99_04915"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9182518.1"
                     /translation="MRKTSIHTAIAAALAGSVTPLAWSQQGGLEEIIVTATFRETNVQ
                     ETPIAITAVNAAMLEARSQTNLAQITAQTPNVSLRAAGSSSGNALVAFIRGIGQTDFN
                     PSVEPGVGIYVDDVYYSTITGNVLDLLDLDRVEVLRGPQGTLAGRNAIGGAIKLFTRK
                     PDGADDANVSITKGEFNRTDLKGAAGITLVEDKLYARIAGIARSMDGYVDRLDFACAK
                     NLPPPGQPGGLPRYVQTASDTTGCGIGTEGGQSYASGRVAFRWTPSDDFSVDFTGSIV
                     NDDSESQPGVLIAARDHSSSAIPIMFQGFGPPQPNPAFNPASDSITFVPIFYDNNNNG
                     TYEAGTDVTLDNRFATGGTYTNYATYINDGKSFPSDYFQGGLPGQNIDVYKPYVIEPV
                     NTLDSWDATLNLNWQISDNVSLLWVMSHREYSNEFAEDTDGSPLAAQQLLQVLDHEQN
                     TYELRFNFTAGLLDLTVGAFYLDQDTAEHARVDLPYVGFDFIHGPDLVPATSQAVFAD
                     GVLHLGERVDLSLGVRYTEDEKSYTFRRRNPDLTPIQACTSVLFWEAANPANCG"
     gene            1941..2492
                     /locus_tag="VIQ99_04920"
     CDS             1941..2492
                     /locus_tag="VIQ99_04920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182519.1"
                     /translation="MSMRIVAIMATALSAMIGVADAQVRPTQPDKDGFIPDVSIAEIM
                     ESIVMPAAQALWDAVGVDVTENGEIERKPETEEQWAELRAAAVTLLESTNSLTVPGRH
                     AAPPGAKSENPEAELTPEKIDTLLKEQRPAWVAHAQVLHAAALQALEAVDARNLDAIT
                     EAGGTIDEACESCHLQFWYPEQR"
     gene            complement(2489..>3710)
                     /locus_tag="VIQ99_04925"
     CDS             complement(2489..>3710)
                     /locus_tag="VIQ99_04925"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY9182520.1"
                     /translation="MAVDETGIGNYEDKVLKKKGKARVIWNSLKGKKSRGVIGEDPEN
                     NLVFVAKPMGVVASVCPVTNPVATPMCNGMFALKTGNAVIFAPHPKAQKCTEHLTNEF
                     MKIVKKHGGPDNLIQTIKNGSVEKTQELMKSADVVVATGGGAMVKSAYSSGKPSYGVG
                     AGNVPVIIDRGVDFKDAVGKIVTGAAFDNGIICSHEQFVLTPEERYDETVKLFKDTGK
                     VWFTDDEVQIEKLRKLVFPDGHLNKDVVGKSAREIGALVGIDVPASARIILLPAKGAG
                     TADLLAKEKLCPVVAILPYKTFHDAVAKAKANLLVEGAGHSAALHSNDDKNIREAGVE
                     LPISRLVVNQPSSLTAGGSLTNGFAPTTTLGCGSWGGNSISENLDYKHLMNVSRIGKV
                     ITNKKVPTDEEIFS"
BASE COUNT          641 a         1141 c         1211 g          717 t
ORIGIN      
        1 gccgcagttc gcagggttag ccgcctccca gaacaggacc gacgtgcacg cctggatcgg
       61 cgtcagatcg gggttacggc gacggaacgt gtagctcttc tcgtcctcgg tatagcgcac
      121 gccgagggag aggtcgacgc gctcgccgag gtgcaacact ccgtcggcga agacggcttg
      181 gctcgtcgcg ggaacgaggt cgggaccgtg gatgaagtcg aagccgacgt acggcaagtc
      241 cacgcgcgcg tgctctgcgg tgtcctgatc gaggtagaag gcgccgaccg tgagatcgag
      301 cagcccggcc gtaaagttga agcgcagctc gtacgtgttc tgctcgtgat ccagaacctg
      361 gagcagctgc tgcgccgcga gcggcgaacc gtccgtgtcc tcggcgaact cgttactgta
      421 ctcgcggtgc gacatgaccc acagcagcga gacgttgtcg ctgatctgcc aattgaggtt
      481 cagcgtcgcg tcccacgaat cgagcgtgtt gaccggctcg atcacgtagg gcttgtagac
      541 gtcgatgttt tgtcccggga ggccgccttg aaaatagtcg ctcggaaagc tcttgccgtc
      601 gttgatatag gtcgcgtagt tcgtgtacgt gccgcccgtc gcgaaacgat tatccaacgt
      661 aacgtcggtg cctgcctcat acgtgccgtt gttgttgttg tcgtaaaaga tgggaacgaa
      721 cgtgatcgag tccgaagccg ggttgaacgc cggattcggt tgcggggggc cgaacccctg
      781 aaacatgatc gggatcgcgg acgaggagtg atctcgtgcc gcgatcagca cgccgggctg
      841 cgactccgag tcgtcgttga cgatgctgcc cgtgaaatcg accgagaagt catccgatgg
      901 cgtccagcgg aatgccacgc gtcccgatgc gtaggattga ccgccttccg tgccgatacc
      961 gcagccggtg gtgtcggacg ccgtctgtac gtacctcggc aagccgccgg gttgcccggg
     1021 gggcggcaag tttttcgcac atgcaaagtc cagacggtcc acatagccgt ccatcgatcg
     1081 cgcgatgccc gcgatacgcg cgtacagctt gtcctcgacg agcgtgatgc cggccgcacc
     1141 cttcaagtca gtgcgattga actcgccctt cgtgatcgag acgttggcgt cgtcggcccc
     1201 atcgggcttg cgcgtgaaca gcttgatcgc gccgccgatc gcgttgcgtc ctgcgagcgt
     1261 tccctgcgga ccgcgcagca cttcgacgcg gtcgaggtcc aggagatcga gcacgttgcc
     1321 cgtgatcgtc gagtagtaga cgtcgtcgac gtagatgccg acgcccggct cgaccgacgg
     1381 gttgaagtcc gtctggccga tgccacggat gaacgcaacg agtgcgttgc ccgatgacga
     1441 gccggcggcc cgcaatgata cgttcggcgt ctgcgctgtg atttgtgcga ggttcgtctg
     1501 gctgcgcgcc tcgagcatcg cggcgttgac cgccgtgatt gcgatcggcg tctcctggac
     1561 gttcgtctca cggaacgtcg cggtgacgat gatctcttcg aggccgcctt gctgcgacca
     1621 cgccaacggc gttacggaac cggcaagcgc cgcggcaatc gcggtgtgta tcgatgtctt
     1681 cctcatgagt ccccccggat tggtgagttg cacattgacc acgttggtca gtgacgcgat
     1741 tctgcgacga aaaacccagg aaatccaggt tttcacggca gtcctgcctg gcagctgtag
     1801 cgcgaaagct acatgactgt gaccatgagt cacgaggcgt gccaagaagc caagggttac
     1861 caattcttaa tgtcagaacc atcttggcga gagcccggtg cgagcagtct cgttcgatcg
     1921 tcttgggtcc ggaggcggca atgagcatgc gaatcgttgc catcatggcg acggcgctga
     1981 gcgccatgat cggtgtcgcg gacgcgcagg ttcggccgac gcagccggac aaagacggat
     2041 tcatccccga cgtctcgatc gcggagatca tggaatcgat cgtgatgccg gcggcacaag
     2101 cgctgtggga cgccgtcggc gtcgacgtga ccgagaacgg cgagatcgag aggaaacccg
     2161 agaccgagga gcaatgggcg gagttgcgcg ccgccgcggt cacgctgctc gaatcgacga
     2221 acagcctcac ggtgccgggt cgccacgcgg cgccgcccgg cgcgaaatcc gagaaccccg
     2281 aggcggagct gacccctgag aagatcgaca cgctcctgaa ggagcagcgg ccggcgtggg
     2341 tcgcgcacgc gcaggtgctg cacgcggccg cgcttcaggc gctcgaggcc gtcgacgcgc
     2401 ggaatctgga cgccatcacg gaggccggcg gcacgatcga cgaggcgtgc gagtcgtgcc
     2461 acctgcagtt ctggtacccg gagcagcgct aggagaagat ctcctcgtcg gtcggcacct
     2521 ttttgttcgt gatgaccttg ccgatccgcg acacgttcat caggtgcttg tagtccaaat
     2581 tctcggagat cgagttgccg ccccacgacc cgcagccaag cgtggtcgtc ggagcgaatc
     2641 cgttcgtgag tgagccgccc gcggtcagcg agctcggttg attcacgacg agccggctga
     2701 tcggcagctc gacaccggcc tcgcggatgt tcttgtcgtc gttcgagtgc aacgccgcgg
     2761 agtgccccgc gccttcgacg agcaggttcg ccttggcttt ggccacggcg tcatggaagg
     2821 tcttgtacgg caggatcgcg acgacggggc acagcttctc cttcgcgagc agatcggccg
     2881 tgccggcgcc cttcgcgggc aacagaatga tccgcgcgct cgcgggcacg tcgatgccga
     2941 ccaacgcgcc gatctcgcgt gcggatttgc cgacgacgtc cttgttcagg tggccgtccg
     3001 ggaacacgag cttgcgcagc ttctcgatct gcacctcgtc gtcggtgaac cacaccttgc
     3061 cggtgtcctt gaacagcttg actgtttcgt cgtagcgctc ctccggtgtc agcacgaact
     3121 gctcgtgcga gcagatgatg ccgttgtcga acgcggcgcc cgtgacgatc ttgccgacag
     3181 cgtctttgaa gtccacgccg cgatcgatga tcacgggcac gttgccggcg ccgacgccgt
     3241 acgacggctt gccggacgaa tacgcggact tcaccatcgc gccgccgccc gtggcgacga
     3301 cgacgtcggc ggacttcatg agctcttgcg tcttctcgac ggagccattc ttgatcgtct
     3361 ggatcaggtt gtcggggccg ccgtgcttct tcacgatctt catgaactcg ttcgtcaagt
     3421 gctcggtgca cttctgcgct ttcgggtgcg gcgcgaagat cacggcgttg ccggtcttca
     3481 aagcgaacat gccgttgcac atcggcgtcg cgacggggtt cgtgacgggg cacacggagg
     3541 cgacgacgcc catcggcttc gcgacgaaca cgagattgtt ctcgggatcc tcgccgatca
     3601 cgccgcgcga cttcttgccc ttcaggctgt tccagatgac acgggccttg cccttcttct
     3661 tcaggacctt gtcttcatag ttgccgatgc cggtttcgtc gacggccatg
//
LOCUS       DATCUD010000338         2111 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_95775, whole genome shotgun sequence.
ACCESSION   DATCUD010000338 DATCUD010000000
VERSION     DATCUD010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95775"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1158)
                     /locus_tag="VIQ99_04930"
     CDS             complement(<1..1158)
                     /locus_tag="VIQ99_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182521.1"
                     /translation="MSFKDRCVRIAIALFAASTPAVLPAQAPPGAPPRASSPELEALN
                     PPVPANIEVSEERRIPAERTAAAYADRNWTAPKTSWGHPSLAGTWSTDDMRGIPVDRP
                     LALGMQEFIGDQDFVERAKRQQAGSDHAANVQTFHRVAYGSRVFGFSSLIVDPPNGRA
                     PALTANGRARAAAVAGNGSFGPGPFDTFEDFSLYDRCIARGLSGGMSAVLYGNGIVIA
                     QSPDSVTITYEMVHETRVIPLDGRAHLPEGITQYNGNSRGRWEGDTLVVETRGFTNKT
                     SVGSGAPNSTSLRTTERLRRIDAEMIEYRITIDDPMTYTAPFTLRAVWTVQPGYEVYE
                     YSCHEGNFAVGGGLSGERAYEREVEEARAKGLPVPRRATMAEIYGATPEGAE"
     gene            1242..>2111
                     /locus_tag="VIQ99_04935"
     CDS             1242..>2111
                     /locus_tag="VIQ99_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011311823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HEY9182522.1"
                     /translation="MAITDTTRRAACVLLAATSLCSVSPASAFDFDDVASLARRKARA
                     PYVQPDRAQPTELELLGYDRYRDIRYRPERAIWRAEGLPFDLMFFHRAQSNPRVRMNE
                     IVDEKARHLPYDSTDFDFGQNTLSPATWGELDYAGLRVHYHLNGPAYKDELIVFLGAS
                     YFRALAAGTRYGLSARGLAVDTVGGQGEEFPYFPEFWIVKPEPNARTLRILALLDSPR
                     VAGAYQFDVIPGDETVVEVRARLYLRAPVGTLGLAPLTSMYQFGENQPHRTDFRPEVH
                     DSDGLMVATGDGEW"
BASE COUNT          347 a          716 c          685 g          363 t
ORIGIN      
        1 ttcggcgcct tccggtgtcg cgccgtagat ctcggccatc gtcgcacgac gcggaacagg
       61 taagcccttg gcccgggcct cctcgacctc gcgttcgtac gctcgttccc cggagagccc
      121 gccgccgacc gcgaagttgc cctcgtgaca cgagtactcg tagacctcgt agccgggctg
      181 caccgtccac accgcgcgca gcgtgaacgg ggccgtgtac gtcataggat cgtcgatcgt
      241 gatccggtac tcgatcattt ccgcatcgat gcgacgcagg cgctctgtcg tgcgcaggct
      301 cgtgctgttc ggcgcaccgg agccgacgct cgtcttgttc gtgaagccgc gggtctcgac
      361 gacgagcgtg tcgccctccc agcggccgcg cgagttgccg ttgtattgcg taatgccctc
      421 cgggagatgt gcacggccgt cgagcggaat cacacgcgtc tcgtgcacca tctcgtacgt
      481 gatcgtgacg ctgtccgggc tctgtgcgat cacgatcccg ttgccgtaga gcacggcgct
      541 catgccgccg ctcaacccgc gcgcgatgca gcggtcgtac aacgaaaaat cctcgaacgt
      601 gtcgaacggc cccgggccga acgagccgtt gcccgcgacc gcggcggctc gcgcgcggcc
      661 gttggccgtg agtgccggcg cgcggccgtt cggcgggtcg acgatcagcg acgagaaacc
      721 gaatacgcgc gagccatacg cgacgcgatg gaaagtttgc acgttggccg cgtgatcgct
      781 gccggcctgc tgacgcttcg cgcgttcgac gaaatcttga tcgccgatga actcttgcat
      841 gccgagtgcc agcggtcgat cgaccggaat tcctcgcata tcgtcggtcg accaggttcc
      901 ggcaaggctg ggatgacccc acgacgtctt cggcgcggtc cagtttcggt ccgcgtacgc
      961 ggcagccgtc cgctcggccg gaatgcgccg ctcctccgat acctcgatgt tggccggaac
     1021 cggaggattc aacgcctcga gctccggcga cgacgcgcga ggcggggcac ccggcggtgc
     1081 ctgggccggc aacaccgccg gtgtagacgc cgcgaacagc gcgatcgcga ttcggacgca
     1141 ccggtccttg aaagacatcg agactctccg agaaatcgaa cgcgatcatc ggccggatcg
     1201 acaacatgcg caattcacag cgtatggcag aatccgcagt catggctatc acggacacca
     1261 cccgccgcgc ggcatgcgtc ctgctcgcgg ccacatcgct gtgcagcgta tcgcctgcga
     1321 gcgcgttcga tttcgacgat gtcgcgagtc tcgcgcgacg caaagcgcgc gccccgtacg
     1381 tgcagccgga ccgcgcgcaa ccgacggagc tcgagttgct cggctacgat cggtaccgcg
     1441 atattcgtta ccgcccggag cgcgcgattt ggcgagccga aggtctgccg ttcgacctga
     1501 tgttcttcca tcgcgcgcaa tcgaacccgc gcgtgcgcat gaacgagatc gtcgacgaga
     1561 aggcacggca cctgccctac gacagcaccg atttcgattt cggccagaac acgctttcgc
     1621 cagcgacgtg gggcgagctc gattacgccg gcctgcgcgt gcactaccac ctgaacgggc
     1681 ccgcgtacaa agacgagctg atcgtgttcc tcggagcgag ctacttccgc gcgctggcgg
     1741 ccggcactcg ttacggattg tcggcgcgcg gtctagccgt cgacacggtc ggcggccagg
     1801 gcgaggagtt tccgtacttt cccgagttct ggatcgtgaa gcccgagccg aatgcccgca
     1861 cgttgcgcat actcgcgctg ctggactcgc cgcgtgtcgc cggcgcgtat caattcgacg
     1921 tgatccccgg cgacgagacc gtcgtcgagg tgcgcgcgcg cctgtatctg cgagcgccgg
     1981 tcggcacgct tgggctggcg ccgctgacga gcatgtatca gttcggcgag aaccagccgc
     2041 ataggaccga cttcaggccc gaggtccacg actccgacgg cctcatggtg gcgaccggcg
     2101 acggcgagtg g
//
LOCUS       DATCUD010000339         4594 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_38795, whole genome shotgun sequence.
ACCESSION   DATCUD010000339 DATCUD010000000
VERSION     DATCUD010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4594
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38795"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1316
                     /locus_tag="VIQ99_04940"
     CDS             <1..1316
                     /locus_tag="VIQ99_04940"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY9182523.1"
                     /translation="LWFYDLEHWRTTGELVRRDLLVGEAALTTGFIDGDTLYAVTTLG
                     ASNKRVVAFDLESDRPEKHRELIAARPDTVIVGIAPAPERIVVDTLIDAQSRIEIFDR
                     AGRPQGNVELPGIGSAGIVTNPQRTIAWMQFENFAEPASLHRVDLAGGRATLWKRTEL
                     GAAGDGPALVVEQVRYRSADGTVVPMFLVHRRDLRRDGTNPTVLYGYGGFDISLTPSF
                     LAAWRPWLVRGGVYAVANLRGGGERGADWHRAGMLENKQNVFDDFYAAAEWLIENGYT
                     RRDRLGIRGGSNGGLLTGVAITQRPEIASAAILAVPLLDMLRYQHFLMARYWVPEYGS
                     AEDPDQFRYLRAYSPYQNVVPGTHYPAVLLTAGENDSRVHPLHARKMTAALQAATASD
                     PDDKPVLLRVDRDVGHGPGKPLSLRIRDAADEVLFMARQLGLEIR"
     gene            1358..1442
                     /locus_tag="VIQ99_04945"
     tRNA            1358..1442
                     /locus_tag="VIQ99_04945"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1392..1394,aa:Leu,seq:tag)
     gene            1473..2786
                     /gene="tig"
                     /locus_tag="VIQ99_04950"
     CDS             1473..2786
                     /gene="tig"
                     /locus_tag="VIQ99_04950"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEY9182524.1"
                     /translation="MNAVNSKSYEVSLETAAGLERRLTIRVPTADIEKAIAARLMQVG
                     KTAKLKGFRPGKVPQKVVRQFYGPQVREEVMTDVIRTTYSRAIAEQNLNPAGGPQIEP
                     LAGGDGAEHFAYRATFEVYPEIKLQPLENVAIDVPRVAIEEPDVDAMIEKLRAQRATW
                     KPVERKAAEGDRVQVDFAGTVDGVSFEGGEAKNISIVIGSGQVLEDFDRALRGVGAGE
                     STTATVVFPQDYAAKHLAGKTAVFAINVLRVEGLELPALDDDFAGSFGLAGGAGSLRD
                     EVRNNMERELKERIRTETKTRAFDALMRLNQVTVPRTLVEQEIDSLQADALRQTGSTA
                     ISKAPSRERFEALAQRRVTVGLLIQELLRHHKVKLEQSRVDQRIKELAAPYEKPEEAA
                     QFYRSDRAMMAQVEASVLEDQVVDFLLSRATCTTKDLSFKEFMGA"
     gene            2812..3429
                     /gene="clpP"
                     /locus_tag="VIQ99_04955"
     CDS             2812..3429
                     /gene="clpP"
                     /locus_tag="VIQ99_04955"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEY9182525.1"
                     /translation="MDTRALNLVPIVVEQTARGERSYDIYSRLLKDRIVFIVGPIDDY
                     MANVVVAQLLFLESENPDKEISLYINSPGGLVTAGLSIYDTMQFIKPDVSTICLGQAA
                     SMGSLLLAGGAKGKRYCLPHSRIMIHQPSGGFQGQATDIDIHAREILKLRERLNEIMA
                     KHTGQTVERIERDMERDNFMEAKAAVDYGIVDNVLAKRPATIPRA"
     gene            3550..>4594
                     /gene="clpX"
                     /locus_tag="VIQ99_04960"
     CDS             3550..>4594
                     /gene="clpX"
                     /locus_tag="VIQ99_04960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009019848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEY9182526.1"
                     /translation="MSDDSRSKGDDGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVE
                     LCNDIIREELDERAERGRDKLPKPHEIKAVLDEYVIGQQTAKKVLAVAVYNHYKRLET
                     RARDKGGKADIELAKSNILLIGPTGCGKTLLAETLARLLNVPFTIADATTLTEAGYVG
                     EDVENIIQKLLQKCEYDVEKAQTGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLK
                     IMEGTIASVPPQGGRKHPQQEFLQVDTSNILFICGGAFSGLDKIVLNRSKKSGIGFVA
                     EVRPPDGGQHINDLLGDVEPEDLIKYGLIPEFVGRLPVVATLEELDEEALIEILTEPR
                     NALTKQYQKLFDME"
BASE COUNT          869 a         1446 c         1536 g          743 t
ORIGIN      
        1 acctctggtt ctacgacctc gagcactggc gcaccaccgg tgagctcgtg cgccgcgatc
       61 tcctcgtcgg cgaggccgcg ctgacgaccg gcttcatcga cggcgacacg ctgtacgcgg
      121 tcacgacgct cggtgcatcg aacaaacgcg tcgtcgcctt cgatctcgag tccgaccggc
      181 ccgagaagca ccgcgagctg atcgcagctc gtcccgacac cgtgatcgtc ggcatcgcgc
      241 ccgcgccgga gcgcatcgtc gtcgacacgc tgatcgacgc gcagagccgc atcgagatct
      301 tcgatcgcgc ggggcggccg cagggcaacg tcgaattgcc ggggatcggc agcgccggca
      361 tcgtcacgaa tccgcagcgc acgattgcct ggatgcagtt cgagaacttc gccgagcccg
      421 cgtcgctgca ccgtgtcgac ctcgcgggcg gccgcgccac gctctggaaa cgcaccgagc
      481 tcggcgccgc gggcgatggg cctgcgctcg tggtcgagca agtcaggtac cgctctgccg
      541 acgggaccgt cgtgccgatg ttcctcgtgc accgccgcga cctgcgccgc gacggcacga
      601 acccgaccgt gctgtacggg tacggcggct tcgacatctc gctgacgccg tccttcctcg
      661 cggcgtggcg cccgtggctc gtgcggggcg gcgtctacgc cgtcgcgaac ctgcgcggcg
      721 gcggcgagcg cggcgccgac tggcatcgcg cgggcatgct cgagaacaag cagaacgtgt
      781 tcgacgattt ctatgcggcc gccgagtggt tgatcgagaa cggctacaca cgccgcgacc
      841 ggctcggcat tcgcggcggg tcgaacggcg gcctgctgac cggagtcgcg atcacgcagc
      901 ggcccgagat cgcgtccgcc gcgatcctcg ccgtgccgct gctggacatg ctgcgctatc
      961 agcacttctt gatggcgcgt tattgggtgc ccgagtacgg cagcgccgag gatcccgatc
     1021 agttccgata cttacgggcg tactcgccgt accagaacgt cgtgccgggc acgcattatc
     1081 cggccgtgct gctgacggcc ggcgagaacg acagccgggt gcatccgctg cacgcccgaa
     1141 agatgacggc cgcgcttcaa gccgcgaccg cgagcgatcc agacgacaag ccggtattgc
     1201 tgcgcgtcga tcgcgacgtc ggccacgggc ccgggaagcc gctgtccttg cggattcgcg
     1261 atgcggccga cgaagtgttg ttcatggccc gccagctcgg cttggagatt cgctgaccgg
     1321 gcccgtctat aatgcgggcc tcatggatcg ccgtggggcg agagtggcgg aattggtaga
     1381 cgcgctggac ttagaatcca gtggggcaac ccgtgggagt tcgagtctcc cccctcgcac
     1441 caatccagtg cgaagacggc tcggaaacta ggatgaacgc agtaaattca aagagttacg
     1501 aggtctcact cgagaccgcg gccgggctgg agcgccgctt gacgatccgc gtgccgacgg
     1561 ccgatatcga aaaggccatt gcggcgcggc tcatgcaggt cggcaagacg gccaagctca
     1621 agggcttccg gcccggcaag gtgccgcaga aggtcgtgcg gcagttctac gggccccagg
     1681 ttcgcgaaga agtcatgacg gacgtgattc gcaccacgta ctcgcgtgcg atcgcggagc
     1741 agaacttgaa cccggccggc gggccccaga tcgagcccct ggcgggcggc gacggcgccg
     1801 agcacttcgc gtatcgcgcg acgttcgagg tgtacccgga gatcaagctg cagccgctcg
     1861 agaacgtcgc gatcgacgtt ccgcgcgtgg cgatcgagga gcccgacgtc gacgcgatga
     1921 tcgagaagct ccgcgcacaa cgcgcgacct ggaagcccgt cgagcgcaag gccgcggaag
     1981 gcgatcgcgt ccaagtcgat ttcgcgggta ccgtcgacgg cgtgtcgttc gagggcggag
     2041 aggcgaagaa catctcgatc gtgatcggct ctggccaagt gctcgaggat ttcgatcgcg
     2101 cgctgcgcgg tgtcggggct ggcgagagca cgacggcaac ggtcgtgttc ccgcaggact
     2161 acgccgccaa gcacctcgcg ggtaagacgg ccgtgttcgc gatcaacgtg ttgcgcgtcg
     2221 agggtctcga gctaccggcg ctcgatgacg atttcgcagg cagcttcggt ttggccggcg
     2281 gcgccggatc tctgcgcgac gaagtccgca acaacatgga gcgcgagctg aaggagcgca
     2341 tccgaacgga gacgaaaacg cgcgcgttcg atgcgctgat gcgtctgaac caggtgacgg
     2401 tcccgcggac gctcgtggag caggagatcg acagtctcca ggccgacgct ttgcgtcaga
     2461 cgggcagcac ggccatcagc aaggcgccgt cgcgcgagcg tttcgaggcc ctcgcgcaac
     2521 gccgcgtcac ggtcggcctg ttgatccagg agcttctgcg ccaccacaag gtcaaactcg
     2581 agcagagcag ggtcgaccag cgcatcaagg agctcgcggc accgtacgag aagcccgagg
     2641 aggcggcgca gttctaccgc agcgatcgtg ccatgatggc gcaagtcgag gcgtcggtgc
     2701 tcgaggacca ggtcgtcgac ttcttgttgt cgcgcgcgac ttgcacgacg aaggatttga
     2761 gcttcaagga attcatgggc gcgtgaacgc gtcccgagta ggagcctagc agtggatacg
     2821 agagcgttga acttggtgcc gatcgtcgtc gagcagaccg cgcgcggcga acggtcgtac
     2881 gacatctact cgcgtttgct gaaggaccgc atcgtgttca tcgtcggtcc gatcgacgac
     2941 tacatggcga acgtggtcgt cgcgcagttg ctgtttctcg agtccgagaa tccggataag
     3001 gagatcagcc tctacatcaa ctcgccgggc ggcctcgtga ctgcgggcct gtcgatctac
     3061 gacacgatgc agttcatcaa gcccgacgtc agcacgattt gcctgggcca ggccgcgagc
     3121 atgggctcgc tgttgctcgc cggcggcgcg aagggcaagc gttactgctt gccgcactcg
     3181 cgcatcatga ttcaccagcc gagcggcggc ttccaaggtc aggccacgga catcgacatc
     3241 cacgcccgcg agatcctgaa gctgcgcgag cggctgaacg agatcatggc gaagcacacc
     3301 ggccaaaccg tcgagcgcat cgagcgcgac atggagcgcg acaacttcat ggaggcaaaa
     3361 gcggccgtgg attacggcat cgtcgacaac gttctcgcga agcgaccggc tacgattccg
     3421 agagcttgat cgcgttgcga ggattgcgtg atctgcgtcg caagaattgc gaagcggctg
     3481 ctttgcagag cgcgagtcga agtgctataa gctgcaaaaa ccgggcttcc ggcgtgaggg
     3541 accgtgacaa tgagcgatga ttcgcgcagc aagggcgacg acgggaagct cctgtattgc
     3601 tcgttctgcg gcaagagtca gcacgaggtg cggaagctca tcgcgggtcc ctcggttttc
     3661 atctgcgacg agtgcgtcga gctctgcaac gacatcattc gcgaggagct cgacgaacga
     3721 gccgaacgcg gccgcgacaa gctgccgaag cctcacgaga tcaaggcggt cctcgacgag
     3781 tacgtgatcg gccagcagac ggccaagaaa gttctcgccg tggccgtgta caaccattac
     3841 aagcggctcg agacgcgcgc gcgcgacaag ggcggcaagg ccgacatcga gctcgcgaag
     3901 agcaacatct tgctgatcgg ccccaccggc tgcggcaaga cgctcctcgc cgagactctg
     3961 gcgcgtctct tgaacgttcc gttcacgatc gccgacgcca cgacgctgac cgaggccggc
     4021 tatgtcggcg aggacgtcga gaacatcatt cagaagctgc tgcagaagtg cgagtacgac
     4081 gtcgagaagg cgcagaccgg catcgtctac atcgacgaga tcgacaagat ctctcgcaag
     4141 tcggacaacc cttcgatcac gcgcgacgtg tcgggcgagg gcgtgcagca ggcgctgctc
     4201 aagatcatgg aaggcacgat cgcttcggtg cccccgcagg gcggccgcaa gcatccgcag
     4261 caggagttct tgcaggtcga cacgtcgaat atcttgttca tctgcggcgg agccttctcg
     4321 ggtctcgaca agatcgtctt gaaccgctcg aagaagagcg gcatcggctt cgtcgcggag
     4381 gtgcgtccgc ccgacggcgg ccagcacatc aacgacttgc tcggcgacgt cgagcccgag
     4441 gacttgatca agtacggcct catcccggag ttcgtcggcc ggttgcccgt cgtggcgacg
     4501 ctcgaggagc tcgacgagga ggcgctcatc gagatcctga ccgagccgcg caacgcattg
     4561 acgaagcaat atcaaaagct cttcgacatg gaag
//
LOCUS       DATCUD010000340         1515 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_45877, whole genome shotgun sequence.
ACCESSION   DATCUD010000340 DATCUD010000000
VERSION     DATCUD010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1515
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45877"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1089
                     /locus_tag="VIQ99_04965"
     CDS             <1..1089
                     /locus_tag="VIQ99_04965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182527.1"
                     /translation="DMPFYKFGVNDGAGTEVYVSPYTADVRLVTTTRTRTLAWIATIP
                     HWFYITPLRTNQPAWYWTVVATSALGCVLAILGLILGFTQLDKGKPFRWSTAIRYRGL
                     MRWHHISGLVFGVFALTWVFSGLLSMEPFDWANAKSLEISDDALTGGPVELERFPAFD
                     AQRWSEITAGRALKELEFRRIHDEPYYLARYTTAEIEADPRRERLHQPYYITGRAEPQ
                     HLLIDAATLAARSEPFATDAILARLAAAAPGANLVTHELLTDYDSYYYSRSRQAVLPV
                     LRVKFDDPLETWVYVDPALGQVLASIHRLQRVERWLYNGLHSLDFAFWYDRRPLWDIG
                     MILLSLGALATSSIGMWLGFKRLRRGPA"
     gene            complement(1061..>1515)
                     /locus_tag="VIQ99_04970"
     CDS             complement(1061..>1515)
                     /locus_tag="VIQ99_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016978560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-dependent peptidase"
                     /protein_id="HEY9182528.1"
                     /translation="RDREYEDEDGVVHTGDDVLSGEAWEQGPVILAWSEIEASGKGEG
                     FNVVVHEFVHKLDMLNGEPDGVPPLHGDLRVPEWVAAFDAAYQDLVDQLEAGAEPWLD
                     PYAAEDPAEFFAVCAEMFFEVPRDLRAEYPDVYDQLARYFKQDLAAVV"
BASE COUNT          233 a          527 c          480 g          275 t
ORIGIN      
        1 gacatgccgt tctacaaatt cggtgtgaac gacggcgccg gaaccgaggt ctacgtgtcc
       61 ccgtacacgg ccgatgtccg gctcgtcacc acgacgagga cgcgcacgct ggcctggatc
      121 gccacgattc cgcactggtt ctacatcacg ccgctgcgga cgaatcagcc cgcgtggtac
      181 tggaccgtcg tcgcgacgtc ggcgctcggt tgcgtgctcg cgatcttggg gttgattctc
      241 ggcttcacgc agctcgacaa gggcaagccg ttccgctggt cgaccgcgat tcgctatcgc
      301 gggctgatgc gctggcacca catctcgggt ctcgtgttcg gcgtgttcgc gctgacctgg
      361 gtattcagtg ggttgctgtc gatggagccg ttcgattggg cgaacgccaa gagcctcgag
      421 atctccgacg atgcgctgac cggcggcccc gtggagctgg agcgtttccc cgcgttcgac
      481 gcgcagcggt ggtcggagat cacggcgggc cgtgcgctga aggagctcga gtttcggcgc
      541 atccacgacg agccctacta cctcgctcgt tacacgacgg ccgagatcga ggccgacccg
      601 cggcgcgaac ggctacatca gccgtactac atcaccggcc gcgccgagcc ccagcacctg
      661 ctgatcgatg ccgcgacgct cgcggctcgc agcgaaccgt tcgcgaccga tgcgatcctc
      721 gctcgcctgg ccgcagccgc gcccggcgcg aacctcgtca cccacgagct cctgaccgac
      781 tacgactcgt actattactc gcgcagccgc caggccgtgt tgccggtgct gcgcgtgaag
      841 ttcgacgatc cactcgagac ctgggtctac gtggatcccg cgctcggcca agttctcgcg
      901 tcgattcatc gactacagcg cgtcgagcgc tggctctaca acggcctgca cagcctcgac
      961 ttcgcgttct ggtacgaccg ccggccgctc tgggacatcg gcatgatctt gttgagcttg
     1021 ggcgcgctcg ccacgagctc gatcgggatg tggctcgggt tcaaacgact gcggcgaggt
     1081 cctgcttgaa gtaccgcgcg agctggtcgt aaacgtccgg atactcggcg cgcaggtccc
     1141 gcggcacctc gaagaacatc tccgcacaca ccgcgaagaa ctcggccggg tcctcggccg
     1201 cgtaggggtc gagccagggc tcggcgccgg cctcgagctg gtcgaccagg tcttgatagg
     1261 ctgcatcgaa cgcagccacc cattcgggca cgcgcaggtc gccgtgcagc ggcggcaccc
     1321 cgtccggctc gccgttcagc atgtcgagct tgtgcacgaa ctcgtgcacg accacgttga
     1381 agccctcgcc cttgccgctc gcctcgattt cgctccaggc caggatgacg gggccttgct
     1441 cccaggcttc gccggacagc acgtcgtcgc cggtgtgcac gacgccgtcc tcgtcctcgt
     1501 attcgcgatc gcgca
//
LOCUS       DATCUD010000341         8123 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59972, whole genome shotgun sequence.
ACCESSION   DATCUD010000341 DATCUD010000000
VERSION     DATCUD010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 8123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8123
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59972"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..339)
                     /locus_tag="VIQ99_04975"
     CDS             complement(<1..339)
                     /locus_tag="VIQ99_04975"
                     /inference="COORDINATES: protein motif:HMM:NF023236.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3329 domain-containing protein"
                     /protein_id="HEY9182529.1"
                     /translation="MTLPNRWFRQLAALAGLLVAALLMGWLFGEPGWWLAGAALVYVA
                     WTLRHLYLLDRALEGQHRVPLFETRGLWAEIFARVGKLRAKARNRKKRYHRLLREVRE
                     STGALADGGII"
     gene            complement(336..1028)
                     /gene="phoB"
                     /locus_tag="VIQ99_04980"
     CDS             complement(336..1028)
                     /gene="phoB"
                     /locus_tag="VIQ99_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002690124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HEY9182530.1"
                     /translation="MAQRRILVVEDERAIREMVCFNLGRAGYLACPAGDAREARAAIA
                     DQRPDLVLMDWMLPDISGLELTRQLKRDPETKEIPVIMLTARAEEDDRVTGLDGGADD
                     YIVKPFAPRELLARIRAALRRGEAGEGEVVTAGGLKLDSASHQVSVNGVEVALGPTEY
                     RLLEFFLRHPDRVYSRAQLLDRVWGGNVYVEERTVDVHIRRLRKALTPHGHDRLIRTV
                     RGAGYRLTPLQS"
     gene            complement(1088..1765)
                     /gene="tsaB"
                     /locus_tag="VIQ99_04985"
     CDS             complement(1088..1765)
                     /gene="tsaB"
                     /locus_tag="VIQ99_04985"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: protein motif:HMM:TIGR03725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEY9182531.1"
                     /translation="MNLLALETSAAVGTVALATKAGVLVRTIASPREQTDQVLEHADA
                     LLAEAGIGLADLAGIAFGRGPGSFTGLRVSAAVAQGLSAASGVPVLPVSSLLCLAERA
                     WREHGCERALVCVDAHMGEVYSAETASRAGVVAVVGAEHLSQPQDVAVPQGSGWWAVG
                     SGFASHAAALATAAKAAVRVLPDLIPSAIDLLPQARRDLEAGRAVAAAAALPVYLRGE
                     TAWKRRS"
     gene            complement(1762..3711)
                     /locus_tag="VIQ99_04990"
     CDS             complement(1762..3711)
                     /locus_tag="VIQ99_04990"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEY9182532.1"
                     /translation="MILDEVFAADGALAERLPGFTYRAAQEQMAALVVEALTSGRHAV
                     IEAGTGIGKTFAYLLPVLLLERRAIISTGTHTLQDQLFSRDLPLLGAVIGRPMQVAVL
                     KGRSNYLCWHRLEAAVNDGTRDAATLAALRALSAWGQSSDSGDLTELEDLAEDQALKA
                     QVTSTVENCLGRECAFFDRCFVAEARRRAQAADVVIVNHHLLLADLSLKDSGFGELLP
                     GTDAVIVDEAHQLPDVAQQFFGWSIGTRELESLARDVFAEARNAGVLAQLDGSLSALA
                     RATVAVRAGAGRAERGERGRTPWIAAPAALRDALPEASAALEALSRDLEPLAEVSTGL
                     RNCAERSSTYGSRLRELAVADATEGLRWFDLGGNSIAAHWTPLDVGTALAARIEAQNG
                     VWVFASATLAVGDDFSHFLRRVGLRSALKGVLPSPFDYERNARIFVPQGLPDPADDRY
                     VEHLLAAIWPLVEAARGGAFLLFTSYRALQRAQTWIEGHDVPGPVLVQGHGSRSELLN
                     RFRADGNAILLGTGSFWQGVDVRGRALRLVVIDKLPFAVPSDPLIQARAEAIRREGGD
                     PFNELSLPQAVLALKQGVGRLIRDFDDRGLIVIGDPRVRTRHYGATFLRSLPAMPVVE
                     DFDAALDFARSLAEPAAEPAAARAV"
     gene            complement(3708..4250)
                     /locus_tag="VIQ99_04995"
     CDS             complement(3708..4250)
                     /locus_tag="VIQ99_04995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182533.1"
                     /translation="MHSYNRSAFSNARSRAVKAAAGAVGLAAGACGAAGQAPPAPPSG
                     MVVSSVLERIVANVDADDRLTLEVAAGTVASHADQLIVSVQFTNQSGHIVDGVRVTSP
                     VPPDVAYVADSATGSGSHVLFSVDQGRTFGQPSELTVVGADGAPRAATPADYTHVRFI
                     LDAALDVGASGIVRFRAVPR"
     gene            4373..6115
                     /locus_tag="VIQ99_05000"
     CDS             4373..6115
                     /locus_tag="VIQ99_05000"
                     /EC_number="4.1.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
                     /protein_id="HEY9182534.1"
                     /translation="MATRLKSLRDWVAEVAELTSPDRIHWCDGTEKEYRKLLDEMLDQ
                     GTLLERNQATYPGCYLHRSDPEDVARVEHLTYVCTQNQADAGPNNNWKAPAEAKDLMK
                     SCFEGAMRGRTMYVIPYCMGPIDSPYARCGVEITDSAYVVANMYLMTRIGKPALKRIE
                     KDKTFVKGLHSIGELDPKRRYIVHFPEELTIMSYGSGYGGNALLGKKCHALRIASYQA
                     RTEGWLAEHMLIVGVESPAGDIHYLACAFPSACGKTNLAMLIPPASQKGWKVWTLGDD
                     IAWMHLDDNGQLRAINPEAGYFGVVPGTNPQTNRNAYEMIGKDTIFTNVAVTAGNDPW
                     WEEKNSGEPAIDWKGNAYKKANGPAAHPNARFTVAAKQNPSYSKLAEAPEGVPISALV
                     FGGRRRELAPLVYQAKSWAHGVLVGASVASETTAAATGKVGIVRRDPMAMKPFCGYNY
                     GDYWAHWLSFGRRSSKLPKIFHVNWFRRDAAGKFLWPGYGENLRVLRWIIDRCEGRVD
                     AVEKPIGFLPKPGDLDLNGVDVSEGTLSQLLAVDTEQWRKEMASIGEYFAEFGDRLPA
                     ELKSEHEKVIRELG"
     gene            complement(6143..7045)
                     /locus_tag="VIQ99_05005"
     CDS             complement(6143..7045)
                     /locus_tag="VIQ99_05005"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9182535.1"
                     /translation="MGKDVEVAILFADVVGSTQLYEQLGDAKARQMVARCLDIMREAT
                     EAHQGTVIKTMGDEVMSTFPTADEAMNAARRMQERISADAELDHPNGHVAIRIGCHFG
                     PVVQEQRDIFGSAVHTANRMTSQAKAKQIITTLATVQRLSAEWQAMTRQIDIATVRGK
                     ADEVVLFEVLWQPEEATSMLPTVGQGRSKTGRAKRLSLRYQGREVTVGEGRKSATLGR
                     AEDNDVVVKGNLISRVHARVEASRDKFTLVDESTNGTFVQTSSGEEIFVRRDSTQLTG
                     EGVIGLGRVAQPGTALAVHFVVEE"
     gene            complement(7108..7929)
                     /locus_tag="VIQ99_05010"
     CDS             complement(7108..7929)
                     /locus_tag="VIQ99_05010"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9182536.1"
                     /translation="MAATAKSKLSATMAEKADIHDLYERSVQAVDLEVEFLRDTFRAL
                     RGRDALSLREDFCGTASLACEWVRGGTRRHAIGVDLDPEVLDWGRRNRVARLPEAARA
                     RVKLKNADVRTVGTERVDIVGAFNFSYFCFKTRDEMRKYFARVRESLHDDGVFFLDAF
                     GGPEASDLLKEKTKIDGFTYVWEQAVFEPVTSRILCHIHFKFPDGSKIKRAFTYDWRL
                     WTLPELRELLLEAGFSNVRVYWEGDDGEGGGNGEFKEHATGEPDLAWIAYLVAEK"
BASE COUNT         1383 a         2822 c         2667 g         1251 t
ORIGIN      
        1 gatgatgccg ccgtcggcca gcgcgcccgt gctttcgcgg acctcgcgca gcaagcggtg
       61 gtagcgcttc ttgcggttgc gggccttcgc ccgcagcttg ccgacgcgcg cgaaaatctc
      121 ggcccacagg ccgcgagtct cgaacaacgg cacacggtgc tggccttcga gagcgcgatc
      181 gagcaggtac aagtgccgca gcgtccatgc aacgtagacg agcgccgccc cggcgagcca
      241 ccaacccggt tcgccgaaca accagcccat caacagcgcg gcgacgagca ggcccgcgag
      301 cgcagcgagt tgccggaacc agcgattcgg cagcgtcacg attgcagggg tgtgagccgg
      361 tagcccgcgc cgcgcacggt gcggatcagc cgatcgtgcc cgtgcggcgt cagcgccttg
      421 cgtagacgcc gaatgtgcac gtcgacggtg cgctcctcga cgtagacgtt gccgccccaa
      481 acgcgatcga gcaactgcgc gcggctatag acgcgatccg gatggcgcag gaagaactcg
      541 agcaaacggt actccgtggg gccgagcgcg acctctacgc cgttcacgct gacctgatgg
      601 ctcgcggagt cgagcttcag gccgcccgcg gtcacgacct cgccctcgcc ggcctcaccg
      661 cggcgcaacg ccgcgcgaat tcgcgcgagc aactcgcgcg gcgcgaacgg cttcacgatg
      721 tagtcgtcgg cgccgccgtc gagcccggtc acgcgatcgt cttcctccgc gcgcgcggtc
      781 aacatgatca cgggaatctc cttggtctcg ggatcgcgct tcagctgtcg cgtcagctcg
      841 agaccgctga tgtcgggcaa catccagtcc atcagcacga ggtcggggcg ttgatcggcg
      901 atcgcggcac gcgcttcgcg cgcatccccg gcagggcacg ctaggtatcc ggcacgaccg
      961 agattgaagc acaccatctc gcggatcgcg cgctcatcct cgaccacgag gattctccgt
     1021 tgagccatcg tcgcctcgcc gtctcctacg cctcgcgaca ttggaccgcg gcaatattac
     1081 agccaggtta cgacctccgc ttccaggccg tttcaccgcg cagatacacg ggcagcgcgg
     1141 ccgcggcggc gaccgcgcgc cccgcctcga ggtcgcgccg cgcctgcgga agtaggtcga
     1201 tcgccgaagg gatcaggtcg ggcagcacgc gcaccgccgc cttcgcggcg gtcgcgagcg
     1261 cggcggcgtg actcgcaaag ccgctgccga cggcccacca gcccgacccc tgcggcacgg
     1321 cgacgtcctg cggctgcgac aagtgctccg caccgacgac ggcgaccacg ccggcgcgag
     1381 acgccgtctc ggccgagtac acctcgccca tgtgagcgtc gacgcacacg agcgcgcgct
     1441 cgcagccgtg ctcgcgccag gcacgctcgg cgaggcacag caggctcgag accggcaaca
     1501 ccggcacgcc actcgcggcc gacaggcctt gcgcgaccgc tgcgctgact cgtaggcccg
     1561 tgaacgaccc cggcccgcgc ccgaacgcga tgccggcgag gtcggcgaga ccgatgccgg
     1621 cctcggccaa cagtgcgtcg gcatgctcga gcacctggtc ggtctgctcg cgaggggacg
     1681 cgatcgtccg gacgagcacg ccggccttcg tcgcgagcgc gaccgtgccg acggcggccg
     1741 aggtctcgag ggcaagcaga ttcatacggc gcgcgcggcc gccggttccg ctgcgggctc
     1801 cgcgaggctc cgcgcaaagt cgagcgccgc gtcgaagtcc tcgacgaccg gcatcgcggg
     1861 caggctgcgc agaaacgtcg cgccgtagtg gcgcgtccgc acgcgcggat cgccgatcac
     1921 gatcaagccg cggtcgtcga aatcccgaat cagccgcccg acgccctgct tcagggcgag
     1981 caccgcctgt ggcagcgaca gctcgttgaa cggatcgccg ccctcgcggc gtatcgcttc
     2041 ggcgcgcgct tggatcagcg gatcgctcgg cactgcgaac ggcagcttgt cgatcacgac
     2101 cagccgaagc gcgcgcccgc gcacgtccac tccctgccaa aagctgcccg tgccgagcag
     2161 gatcgcgttg ccgtcggcgc gaaatcggtt cagcagctcg ctacgcgatc cgtgcccttg
     2221 cacgagcacg gggcccggaa cgtcgtggcc ctcgatccaa gtctgcgcgc gctgcaacgc
     2281 gcgatagctc gtgaacagca ggaacgcccc gccgcgcgca gcctcgacga gcggccagat
     2341 cgcggcgagc aggtgctcga cgtagcgatc gtcggccgga tccggcaacc cttgcggtac
     2401 gaagatccgg gcgttccgct cgtagtcgaa cgggctcggc aacacgcctt tgagcgcgct
     2461 gcgcagcccg accctgcgca ggaaatgaga gaagtcgtcg ccgaccgcga gcgttgcgga
     2521 cgcgaacacc cagactccgt tctgcgcctc gatgcgtgcc gcgagagcgg ttccgacatc
     2581 gagcggcgtc caatgagccg cgatggaatt accgccgaga tcgaaccagc gcaagccttc
     2641 ggttgcgtcc gcgaccgcaa gctcgcgcaa ccgcgagccg tacgtgctgc tgcgctcggc
     2701 gcagttgcgg aggccggtgc tgacttcggc gagcggctcg agatctcgac tcagcgcttc
     2761 gagcgcggcg gaggcttcgg gcaacgcatc gcgcaacgcc gcgggcgcgg cgatccacgg
     2821 cgtgcgccca cgctcgcctc gctcggctcg cccggcacct gcgcgcacgg cgacggtcgc
     2881 gcgagcgagc gcgctcaatg agccgtcgag ctgcgcgagc acgcccgcgt tgcgcgcctc
     2941 ggcgaacacg tcgcgcgcga gcgactcgag ctcgcgagtg ccgatcgacc aaccgaagaa
     3001 ttgctgcgcg acgtcgggta gctgatgcgc ttcgtcgacg atcacggcat cggttccggg
     3061 cagcagctcg ccgaaccccg agtccttcag cgacagatcc gcgagcagca ggtgatggtt
     3121 cacgatcacg acgtcggccg cctgcgcgcg gcggcgcgcc tcggccacga agcagcggtc
     3181 gaagaaagcg cactcgcgtc ccaagcaatt ctcgactgtc gacgtcacct gggctttcag
     3241 cgcctggtcc tcggcgaggt cctcgagctc ggtcaggtca ccgctgtcgc tgctctgccc
     3301 ccaggccgac agcgcgcgca gggccgcgag cgtcgcggcg tcgcgcgtac cgtcgttcac
     3361 tgccgcctcg aggcggtgcc agcacaagta gttgctgcgc cctttcagca ctgcgacttg
     3421 catcggtcgg ccgatcacgg cgccgagcag cggtaggtcg cggctgaaga gctgatcctg
     3481 gagcgtgtgc gtgcccgtcg aaatgatcgc gcgccgctcg agcagcagga ccggcagcaa
     3541 atacgcaaac gtcttgccga tgccggtccc ggcctcgatc acggcatggc gtcccgacgt
     3601 caatgcctcg acgacgagcg cggccatctg ctcctgtgcg gcgcggtacg taaagccggg
     3661 cagccgctcc gcgagcgctc catcggcggc gaacacttcg tcgagaatca acgcggcacc
     3721 gcgcgaaatc gcacgatccc cgacgcaccg acgtcgagcg cggcgtcgag gatgaagcgt
     3781 acgtgcgtgt agtcggcggg ggtggccgcg cgcggcgcgc cgtcggcgcc gacgaccgta
     3841 agctcggacg gctgcccgaa ggtgcggccc tgatcgaccg aaaagagcac gtggctgccg
     3901 gagccggtcg cgctgtccgc gacgtaggcg acgtcgggag gcaccggact cgtcacgcgc
     3961 acgccgtcga cgatgtggcc gctctggttc gtgaattgca cgctcacgat tagctggtcc
     4021 gcgtgcgacg ctacggtgcc cgcggcgact tcgagcgtca ggcgatcgtc ggcgtccaca
     4081 ttcgcgacga tgcgctcgag caccgacgac acgaccatcc cgctcggcgg cgcgggcggc
     4141 gcttggccgg ctgcgccgca ggcgcccgcg gcgagcccaa ccgcaccggc cgcggccttg
     4201 acggcgcgac tccgtgcgtt cgagaaagcg ctgcggttgt agctgtgcat aacttcagca
     4261 agtcagcgac ataacaggga tttttttgcc gggcgaagac gggcaattgg ctcttcggga
     4321 cggcgcgcag gctatactac gccgcttcat tcctcgaagt acccaaggat ccatggccac
     4381 gcgtctcaag agtctccgcg actgggttgc ggaagtagcc gaattgacca gccccgaccg
     4441 aattcactgg tgcgacggca ccgagaagga gtatcgcaag ctcctcgacg aaatgctcga
     4501 tcaaggcacc ctgctcgagc ggaaccaggc cacgtatccc ggctgctacc tgcatcggtc
     4561 cgaccccgaa gacgtcgcgc gcgtcgagca cctgacctac gtctgcacgc agaatcaagc
     4621 cgacgcgggc ccgaacaaca actggaaggc gccggccgaa gccaaggacc tgatgaagtc
     4681 gtgcttcgag ggcgccatgc gcggccgcac gatgtacgtg atcccgtact gcatggggcc
     4741 gatcgactcg ccgtacgcgc gttgcggtgt cgagatcacg gatagcgcct acgtcgtcgc
     4801 gaacatgtac ttgatgactc gcataggcaa gccggctctg aaacgaatcg aaaaagacaa
     4861 gaccttcgtc aaagggctgc attcgatcgg cgagctcgat ccgaagcgcc gctacatcgt
     4921 tcacttcccc gaggagctca cgatcatgag ctacggctcg ggctacggcg gcaatgcgct
     4981 gctcggcaag aaatgtcatg cgcttcggat cgcgagctac caggcgcgca ccgaaggctg
     5041 gctcgccgag cacatgctga tcgtcggagt cgagagcccg gccggcgaca tccattatct
     5101 cgcatgcgcg ttcccatcgg cgtgcggcaa gacgaatctc gcgatgctga ttccgcccgc
     5161 gagccaaaaa ggctggaagg tctggacgct cggcgacgac atcgcgtgga tgcatctcga
     5221 cgacaacggc cagctgcgcg cgatcaaccc cgaagccggc tacttcggtg tcgtgcccgg
     5281 aacgaacccg cagacgaacc gcaacgcgta cgagatgatc ggcaaggata cgatcttcac
     5341 gaacgttgcc gtgactgccg gcaacgaccc ctggtgggaa gagaagaaca gtggcgagcc
     5401 ggcgatcgat tggaaaggca acgcgtacaa aaaagcgaac ggccccgccg cgcacccgaa
     5461 cgcccgcttc acggtggccg cgaagcaaaa cccgagctac tcgaagcttg ccgaggctcc
     5521 ggaaggcgtg ccgatctcgg cgctcgtgtt cggcggccgg cgccgcgagc tggcgccgct
     5581 cgtgtaccag gcgaagagct gggcgcacgg cgtgctcgtc ggcgcgagcg tggcctcgga
     5641 gaccacggca gcggcgaccg gcaaggtcgg tatcgtgcgc cgcgatccga tggcgatgaa
     5701 gccgttctgc ggctacaact atggcgatta ctgggcgcac tggctgtcgt tcggccggcg
     5761 ctcgagcaag ctgccgaaaa tcttccacgt gaactggttc aggcgcgacg ccgccggcaa
     5821 attcctgtgg ccggggtacg gcgagaacct gcgagtgctg cgctggatca tcgaccgctg
     5881 cgaagggcgc gtggacgccg tcgaaaagcc gatcgggttc ctaccgaagc cgggcgacct
     5941 cgatctcaac ggcgtcgacg tctcggaggg cacgctctcg cagctgctcg cggtcgacac
     6001 cgagcagtgg cgcaaggaaa tggccagcat cggcgagtac ttcgcggagt tcggcgatcg
     6061 cctgccggcg gagctgaagt ccgagcacga gaaggtgata cgcgagctcg gctgaggccg
     6121 cagtccctgg cggtcggccg ttttattctt cgacgacgaa gtggacggcg agcgcggtcc
     6181 cgggctgcgc gacgcggcct aggccgatca cgccttcacc cgtgagctgc gtgctgtcgc
     6241 gccggacgaa gatctcctcg cccgagctcg tctgaacgaa cgtgccgttc gtgctctcgt
     6301 ccacgagcgt gaacttgtcg cggctcgcct cgacgcgcgc atggacgcgc gagatcaggt
     6361 tgcccttcac gacgacgtcg ttgtcctcgg cgcggccgag cgtcgcgctc ttgcgacctt
     6421 cgccgaccgt gacctcgcgg ccctgatacc gcaggctcaa gcgcttcgcg cggccggtct
     6481 tgctcctacc ctgcccgacc gtgggcagca tgctcgtcgc ttcctcgggc tgccacagca
     6541 cctcgaacag cacgacctcg tcggccttgc cgcgcacggt cgcgatatcg atctgccgcg
     6601 tcatggcctg ccactcggcc gacagccgct ggaccgtcgc gagcgtcgtg atgatctgct
     6661 tggccttggc ttggctcgtc atgcgattcg ccgtgtgcac ggccgagccg aagatgtcac
     6721 gctgctcctg cacgaccggg ccgaagtgac agccgatcct gatcgcgacg tggccgttcg
     6781 ggtgatcgag ctccgcgtcg gccgagattc gttcctgcat ccggcgcgcg gcgttcatcg
     6841 cttcatcggc cgtcgggaag gtcgacatga cctcgtcgcc catcgtcttg atcacggtgc
     6901 cctgatgggc ttccgtcgcc tcgcgcatga tgtcgaggca gcgggccacc atctggcgcg
     6961 ccttcgcatc gccgagctgt tcgtatagct gcgtgctgcc caccacgtcg gcgaacagaa
     7021 tcgcaacctc tacatcctta cccatggctt cctttgagtg cgcatcggag ccgccgcgat
     7081 tatacgccat ggcccccgcg ggaacggcta tttctccgcg accagatacg cgatccacgc
     7141 gagatccggc tcgcccgttg catgctcctt gaattcgccg ttgccgccac cctcgccgtc
     7201 gtccccttcc caatacacgc gcacgttcga gaacccggcc tcgagcagca gctcgcgcag
     7261 ctcgggcagc gtccacaggc gccagtcgta cgtgaacgcg cgcttgatct tcgacccgtc
     7321 cgggaatttg aaatgaatgt ggcacagaat gcgactcgtt acgggctcga acacggcttg
     7381 ctcccagacg tacgtgaagc cgtcgatctt ggttttctcc ttcaaaaggt ccgacgcctc
     7441 gggaccgccg aacgcgtcga ggaagaacac accgtcgtcg tggagagact cgcggacgcg
     7501 cgcgaaatac ttgcgcatct catcgcgcgt cttgaaacag aagtagctga agttgaatgc
     7561 gccgacgatg tccacgcgtt cggtgccgac cgtgcgcacg tcggcgttct tgagcttgac
     7621 gcgggccctg gccgcttccg gcaagcgcgc gacgcgattg cgccggcccc aatcgagcac
     7681 ttcggggtcg agatcgacgc cgatcgcgtg ccggcgcgta ccgccacgca cccattcgca
     7741 ggcgaggctc gcagtgccgc aaaaatcctc gcgcaagctc agcgcatcgc ggccgcgcaa
     7801 cgcgcgaaac gtgtcgcgca ggaactcgac ctcgaggtcg actgcctgca cggaacgctc
     7861 gtacagatcg tgaatatcgg ccttctctgc catcgttgcc gatagcttgc tcttcgccgt
     7921 ggctgccacg ccgttctcct cgagggctcg atgccgggga tggctttatt gtaagcgatg
     7981 cacgagcccg cgcagctcgt cgaggccgcg gctgccttcg gcgagcagcc cgagctcgcg
     8041 ccgccagagc cggccgccgg ggcggccgct gcgcatgccg agcaagtgac gcgtcatggc
     8101 cttcagcgag gtgccgcagg cga
//
LOCUS       DATCUD010000342         4364 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53111, whole genome shotgun sequence.
ACCESSION   DATCUD010000342 DATCUD010000000
VERSION     DATCUD010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4364)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4364)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4364
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53111"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2901
                     /gene="purL"
                     /locus_tag="VIQ99_05015"
                     /gene_synonym="purI"
     CDS             <1..2901
                     /gene="purL"
                     /locus_tag="VIQ99_05015"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014421946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEY9182537.1"
                     /translation="GRGAKPKAGLVGFTVSHLDVPGFRQPWERSSPGRPDRIASPLSI
                     MLEGPIGAASFNNEFGRPNLAGYFRTALLDANGAWRGYHKPIMIAGGLGNVREQNVAK
                     AKPGPGAKLVVLGGPAMLIGLGGGAASSQGSGAGEEALDFASVQRGNPEMQRRAQEVI
                     DTCAALGADNPIAAIHDIGAGGLSNAVPEIVDHSGCGAEIELRAIPNDEPGMSPMELW
                     CNESQERYMLSIEPQRLPEFLRICERERCPVAVIGELTAKRDLVVRDSTLGGAPVAMP
                     MEVLFGKPPKMTRHATRREPKPPEWRREQLRLDSAIERVLAFPAVADKSFLIHIGDRT
                     VGGLVARDQLVGPWQVPVSDCAVTAAAYDGYTGEAFAMGERTPVAIHAGPASARLAVA
                     EAVLNIAAADVAALADIRLSANWMAAAGHGDDDYALYAMVRTVGEELCPALGIAVPVG
                     KDSLSMRTVWTDGGKERAVTAPVSLIVSAFAPVQDIRRTLTPELEREPGGVLVFIDLA
                     NGAQRLGGSSLAQTYGQYGGAPPDLDDPRRIVRWFAAQRALRAAGVVRAYHDRSDGGL
                     LVTLAEMAFASHVGLDIALDGAVADPIAYLFNEELGAVIQVRDADLEAVRRVLAEHDV
                     AHSVVARVAAHDDIAVMKAGKEIHRAPRVELQRQWSELTYRMQALRDDPECAREAYET
                     ALDPNDPGLSAKLTFPLPTERRAGARAGRPKVAVLREQGVNGQREMAATLDRAGFESH
                     DVHMSDLLSGRKRLDGYRGVVACGGFSYGDVLGAGEGWAKTILYHERVRPMFAEFFAR
                     EDVFALGVCNGCQMLAALRQLIPGTESWPKFLRNRSDQFEARLSLVEIVRSPSILLAG
                     MEGSRLPIVTAHGEGRAEFASPSALADCDARLAALRFVTNAGAIADRYPANPNGSPRG
                     IAGLSNTDGRVTIMMPHPERVFRTTQLSWHPAEWGECSPWQRLFDNARSWVG"
     gene            3251..3724
                     /locus_tag="VIQ99_05020"
     CDS             3251..3724
                     /locus_tag="VIQ99_05020"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9182538.1"
                     /translation="MALVALLAAAGAVSAATELRGTEAPDFVLKSLSGKNLRLSEYRG
                     EVVMLTFWAAWCGDCRAQLAELGAMRDRYQDAGVELLAVSLDQNAKQAGEASADVNFP
                     VLHDAGGEVGRLYDVTKMPVMVLIDRGGVVREVFEGFRRGNEEQYLEHVQALLRE"
     gene            3750..4337
                     /locus_tag="VIQ99_05025"
     CDS             3750..4337
                     /locus_tag="VIQ99_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007018940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEY9182539.1"
                     /translation="MVVKWIASVSLSMLAAGGVTLAAAQEAPVETVAAVPEFGRAATE
                     NAEFRTLDEDVQDLKKQVLDLNRDLFLLEEELLFPSNTQTAVFVSMDVGEFFGLDSVE
                     LKIDNKDVANYLYTEREAQALLKGGVQRLFIGNLKAGEHELVAVFTGQGPHTRDYRRA
                     ASLVFEKGIGPKYIELTISDRENKQQPEFVVKEWE"
BASE COUNT          687 a         1386 c         1575 g          716 t
ORIGIN      
        1 gggcgcggcg cgaaaccgaa ggccggtctc gtggggttca cggtatcgca tctcgacgtt
       61 ccgggcttca ggcagccctg ggaacggtcg tcgccgggca ggccggaccg catcgcatcg
      121 ccgctctcga tcatgctcga aggtccgatc ggcgccgcga gcttcaataa cgagttcggt
      181 cggccgaacc tcgccggcta tttccgcacg gcgttactcg acgcgaacgg cgcatggcgc
      241 ggctatcaca agccgatcat gatcgcgggc gggctcggca atgtccgcga gcagaacgtc
      301 gcgaaggcga aaccgggtcc cggcgccaag ctcgtcgtgc tcggcggtcc cgcgatgctg
      361 atcggcttgg gcggcggtgc cgcatcgtcg cagggcagcg gcgcgggcga ggaagcgctc
      421 gacttcgcct cggtgcagcg cggcaatccc gagatgcaac ggcgcgcgca ggaagtcatc
      481 gatacgtgcg cggcgctcgg tgcggacaac ccgatcgcgg cgattcacga catcggcgcc
      541 ggaggcctgt cgaacgccgt gcccgagatc gtggatcaca gcggttgcgg agccgaaatc
      601 gagctccgtg cgattccgaa cgacgagccc ggcatgagcc cgatggagct gtggtgcaac
      661 gaatcccaag agcgctacat gctgtcgatc gagccgcagc gcttgccgga gtttctccgc
      721 atctgcgagc gcgagcgctg tccggtcgcc gtgatcggcg agctcaccgc gaaacgcgac
      781 ctcgtcgtac gtgactccac gcttggcggc gcgcccgtcg cgatgccgat ggaggtcctg
      841 ttcgggaagc cgccgaagat gacgcggcac gcgacgcgcc gcgagccgaa gccgccggaa
      901 tggcggcgcg agcaactgcg gctcgattcc gcgatcgagc gcgtgctcgc gttcccggcc
      961 gtcgcggaca agtcgttcct gatccatatc ggcgatcgca cggtcggcgg cctcgtagcg
     1021 cgcgaccagc tcgtgggtcc gtggcaggtg ccggtcagcg actgcgccgt cacggcggcg
     1081 gcgtacgacg gttacacggg cgaggcgttt gcgatggggg agcggacgcc cgtcgcgatt
     1141 cacgcgggtc cggcgtcggc gcggctcgcg gtcgccgaag ccgttttgaa catcgcggcg
     1201 gcagacgtcg ccgcgcttgc cgacatccgc ttgtccgcga attggatggc ggcggccggc
     1261 catggcgatg acgactacgc gctctacgcg atggtccgga cggtcggcga ggagctttgc
     1321 ccggctttgg gtatagcggt cccggtcggc aaggactcct tatctatgcg cacagtctgg
     1381 acggacggcg gcaaagagcg cgcggtgacc gcacccgtgt cgctgatcgt gtcggcgttc
     1441 gcgccggtcc aagacattcg ccgcacgttg acgccggagc tcgagcgcga gcccggcggg
     1501 gtgctggtgt tcatcgattt ggcgaacggg gcgcagcggc tcggtggctc cagcctcgcg
     1561 cagacctacg gccagtacgg cggcgcgccg ccggatctcg acgatccgcg ccgcatcgtg
     1621 cgttggttcg cggcgcagcg ggcccttcgc gccgcgggcg tggtgcgcgc gtatcacgac
     1681 cgctccgacg gcggcttgct cgtgactctg gcggagatgg cattcgcgtc gcacgtcggt
     1741 ctcgacatcg cgctcgacgg ggcggtcgcc gatccgatcg cgtacctgtt caacgaagag
     1801 ctcggcgccg tgatccaggt ccgcgatgcg gacctcgagg cggtgcggcg cgtgctcgcg
     1861 gagcacgacg tcgcgcacag tgtggtcgcg cgcgtcgcag cccacgacga catcgcggtc
     1921 atgaaggccg gcaaagaaat tcatcgcgca ccgcgcgtgg agctgcagcg ccagtggtcc
     1981 gagctcacgt accgaatgca ggcgctgcgc gacgacccgg agtgcgcgcg ggaagcgtac
     2041 gagaccgcgc tcgatccgaa cgatcccggc ctcagcgcca agctcacgtt tccgctgccg
     2101 acggaacggc gcgcaggcgc gcgtgccggc cggccgaagg tggccgtgct ccgcgagcaa
     2161 ggcgtgaacg gccagcgcga gatggcggcg acgctcgatc gcgcgggctt cgagtcgcac
     2221 gacgtgcaca tgagcgatct cttgtccggc cgcaagcgac tcgacgggta tcgcggcgtc
     2281 gtcgcgtgcg gcggcttctc gtacggcgac gtgctcggcg ccggtgaggg ttgggccaag
     2341 acgatcctgt atcacgagcg cgtgcggccg atgttcgcgg agttcttcgc gcgcgaggat
     2401 gtgttcgcgc tcggcgtctg caacggctgt caaatgctcg cggcgttgag gcagctgatc
     2461 cccggcacgg agtcgtggcc gaagttcctg cgcaatcgtt cggatcagtt cgaggcgcgc
     2521 ctctcgctgg tcgagatcgt gcggagcccg tcgattctgc tcgccggcat ggagggctcg
     2581 cgcctgccga tcgtcacggc gcacggcgag ggtcgcgccg aattcgcgtc gccgagcgcg
     2641 ctggccgact gcgatgcgcg gctcgccgcg ctgcggttcg tgacgaacgc gggcgccatc
     2701 gcggaccgct atcccgcgaa tccgaacggc tcgccgcgcg gtatcgcggg tctctcgaac
     2761 acggacggcc gcgtcacgat catgatgccg cacccggagc gcgtgttccg gacgacgcag
     2821 ctctcgtggc atcccgcgga gtggggggag tgctcgccct ggcagcgcct gttcgacaac
     2881 gcccgctcct gggtcggctg accggcgcac cgcggcagct gtgtcgcagt gctgcgacac
     2941 tcgcaagcag cctttttcgc ggcctttcag agtttacaag cctgcgcgtt gtagccgcac
     3001 gccgacaaac agcgcgtggc gcgcgcgtcc aggcaaggcc gaaagccagc aacggcgcgg
     3061 tgtgcggcgt gtttgtgatt gctggcacgt ttcgtgctgt cgaggcaacg gtggggcaca
     3121 gagaaaggac ttgagacctg gctcatagcc ctcgaggcgg ggcaggactt agggtggccg
     3181 gcgaccgctc ccgatatcgt cccgaggggt ctttggcatg actcgaccga acagagcgcg
     3241 atggagcggc gtggcgctcg tggcactgct cgccgcggcg ggcgccgtct cggcggcgac
     3301 ggagttgcgt ggcacggaag cgccggactt cgttctgaag agtctttcgg gcaagaacct
     3361 gcgtttgtcc gagtatcgcg gcgaggtcgt gatgctgacg ttttgggctg cctggtgcgg
     3421 tgactgtcgc gcgcagcttg ccgagctcgg cgcgatgcgc gatcgctatc aagacgccgg
     3481 cgtcgagctc ttggccgtga gcctcgatca gaacgcgaaa caggcaggtg aagcctcggc
     3541 cgacgtgaat tttccggtgc tgcacgacgc aggcggcgaa gtggggcgcc tgtacgacgt
     3601 gacgaagatg cccgtgatgg tgctgatcga ccgcggcggc gtggtgcgcg aggtcttcga
     3661 agggtttcgt cgcggcaacg aggagcaata cctcgagcac gtgcaagcgc tgttgcgcga
     3721 atagttttgg aacgacgttg gagcgtgcga tggtagtcaa gtggatcgcg tcggtgtcgc
     3781 tctcgatgct cgcggcgggc ggtgtcacgc tcgcggcggc gcaagaggcg cccgtcgaaa
     3841 cggttgcggc agtccccgag ttcggacgag ccgcgacgga aaacgccgag ttccgcacgc
     3901 tcgacgagga cgtgcaggat ctcaagaaac aggtgctcga cctgaaccgc gacctgttcc
     3961 tgctcgagga ggagctgttg ttcccatcga acactcagac cgcggtgttc gtctcgatgg
     4021 acgtcggcga gttcttcggg ctcgactcgg tcgagctcaa gatcgacaac aaggacgtcg
     4081 cgaactatct gtacaccgag cgcgaggcgc aggcgctcct gaagggcggc gtgcagcggc
     4141 tcttcatcgg caacctgaaa gccggcgagc acgagctcgt cgcggtgttc acggggcaag
     4201 gcccgcacac gcgcgactat cgtcgcgccg catcgctggt gttcgagaag ggcatcggcc
     4261 cgaaatacat cgagctcacg atctcggatc gagagaacaa gcagcagccc gagttcgtcg
     4321 tcaaggagtg ggagtagacg gtgcttaacc gccttctcac actc
//
LOCUS       DATCUD010000343         7739 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_59986, whole genome shotgun sequence.
ACCESSION   DATCUD010000343 DATCUD010000000
VERSION     DATCUD010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 7739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7739
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_59986"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /gene="rplB"
                     /locus_tag="VIQ99_05030"
     CDS             <1..759
                     /gene="rplB"
                     /locus_tag="VIQ99_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018274068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY9182540.1"
                     /translation="HKGAPHEPLLEPFRKQGGRNNQGRITTRHQGGGHKRYYRVIDFK
                     RDKDGVAGKIERLEYDPNRTSYLALVLYADGERRYILAPKGAKAGDPIASGVDVPIKP
                     GSALPLKNIPIGSLVHCIELKPGKGAQMARSAGASVQLVAREGEYVTVRLRSGEMRKV
                     HVNCRATIGEVGNDEHNLRKIGKAGAQRWRGIRPTVRGVVMNPVDHPHGGGEGKSGQG
                     NPHPVSPWGQKTKGYKTRRNKRTRNMIVRDRRQK"
     gene            790..1053
                     /gene="rpsS"
                     /locus_tag="VIQ99_05035"
                     /pseudo
     CDS             790..1053
                     /gene="rpsS"
                     /locus_tag="VIQ99_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017461870.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
     gene            1173..1505
                     /gene="rplV"
                     /locus_tag="VIQ99_05040"
     CDS             1173..1505
                     /gene="rplV"
                     /locus_tag="VIQ99_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002709727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEY9182541.1"
                     /translation="MQVVAKLMYARISPQKCRLVADQIRGQSVASALKILAFSRKKAA
                     RMMHKVLESAIANAEHNHGADIDELKVSNVLVDAAPFFARYAARAKGRGDRILKRNSH
                     ITVRVGDE"
     gene            1509..2207
                     /gene="rpsC"
                     /locus_tag="VIQ99_05045"
     CDS             1509..2207
                     /gene="rpsC"
                     /locus_tag="VIQ99_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007191152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEY9182542.1"
                     /translation="MGQKVHPVGIRLGITKEWSSRWYANTQTFPVYVEQDHRVREFLR
                     AKLKEASISRIHIERPAKKANITIHTARPGVVIGKKGEDIEKLRGEVAKLLGMPLHDV
                     RLNIAEIRKPELDALLVAEGIAQQLERRVQFRRAMRRAVTNTMRIGAEGIKVRVSGRL
                     NGAEIARSEWYREGRVPLHTFRADIDYGLAEARTTYGVIGVKVWVFRGEVREGAPAEQ
                     APTDQAEAPRPAQA"
     gene            2218..2631
                     /gene="rplP"
                     /locus_tag="VIQ99_05050"
     CDS             2218..2631
                     /gene="rplP"
                     /locus_tag="VIQ99_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011041715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY9182543.1"
                     /translation="MLQPKRTKFRKQFKGRNRGLAHRGSSVAFGDYGLKSIERGQVTA
                     RQIEAARRAMTRFVKRGGHIWIRVFPDKPITKKPLEVRQGKGKGNVEYWVAQVQPGRL
                     LYEIAGVTEEVAREAFALAAAKLPLSTTFVERAAG"
     gene            2631..2834
                     /gene="rpmC"
                     /locus_tag="VIQ99_05055"
     CDS             2631..2834
                     /gene="rpmC"
                     /locus_tag="VIQ99_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006913637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEY9182544.1"
                     /translation="MKVKEQRKAFREKSDAELGEELLKLRREQFNLRMQAATGQGAKP
                     DQHGKVRKSIARLKTVQRERVKQ"
     gene            2846..3133
                     /gene="rpsQ"
                     /locus_tag="VIQ99_05060"
     CDS             2846..3133
                     /gene="rpsQ"
                     /locus_tag="VIQ99_05060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010856287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY9182545.1"
                     /translation="MSAVETPQKPTQRPTIGRVVSHKMQKSVTVAVERLVKHPAYGKF
                     IRRTTKVMAHDEEGTCREGDTVAIVECRPISKRKSWRVVEVVERAPVETEA"
     gene            3143..3511
                     /gene="rplN"
                     /locus_tag="VIQ99_05065"
     CDS             3143..3511
                     /gene="rplN"
                     /locus_tag="VIQ99_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004145357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY9182546.1"
                     /translation="MIQTQTLLNAADNSGARSLMCIRVFGGSKRRYARIGDIIKVTIK
                     DAIPRGRVKKGEVYHAVVVRTRHGLRRPDGSLIRFDGNAAVLLTNKFEPIGTRIFGPV
                     TRELRTTQFMKIISLAPEVL"
     gene            3523..3840
                     /gene="rplX"
                     /locus_tag="VIQ99_05070"
     CDS             3523..3840
                     /gene="rplX"
                     /locus_tag="VIQ99_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012823233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY9182547.1"
                     /translation="MQRIKKGDQVIVTTGKDKGRRGTVLRVEDDGRIVVENVNVAHKH
                     QRPNPQKGVAGGIVDQEKSLHPSNVMLFNPTTQKADRVGFRRLSDGRKVRFFKGNDEV
                     LDT"
     gene            3842..4390
                     /gene="rplE"
                     /locus_tag="VIQ99_05075"
     CDS             3842..4390
                     /gene="rplE"
                     /locus_tag="VIQ99_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003486694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY9182548.1"
                     /translation="MAARLQEFYRKEVVPQLMKQLKVKNPMAVPRITKITLNMGVGEA
                     LADRKVLENAMADLAKISGQKPVACKAKKSVASFKVRDGVAIGCKVTLRKAQMYVFLD
                     RLISVAMPRIRDFRGVSRRAFDGRGNYNLGVKEQIIFPEINFDQVDAIRGLDISITTT
                     ARNDDAGRALLEAFKFPLRSDR"
     gene            4390..4695
                     /gene="rpsN"
                     /locus_tag="VIQ99_05080"
     CDS             4390..4695
                     /gene="rpsN"
                     /locus_tag="VIQ99_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004924130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEY9182549.1"
                     /translation="MAKKSMLMRQRHREQAVKRYAAKRAELKELIRNPRTSEDDKLEA
                     QKKLQKLPRDANPIRLRNRCALTGRPHGYYRKFGLSRTKLRETTMRGEIPGVRKASW"
     gene            4706..5101
                     /gene="rpsH"
                     /locus_tag="VIQ99_05085"
     CDS             4706..5101
                     /gene="rpsH"
                     /locus_tag="VIQ99_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018413349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY9182550.1"
                     /translation="MSMTDPIADMLTRIRNAQVARKPSVALPASKQKLAVAKVLEQEG
                     YLAGVSTEKVDGKDTLTLTLKYYQDRPVIERIERVSRPGLRIFKRADELPVVQGGLGV
                     AIVSTSQGVMTNRQAKAQGHGGEVLCIVL"
     gene            5123..5656
                     /gene="rplF"
                     /locus_tag="VIQ99_05090"
     CDS             5123..5656
                     /gene="rplF"
                     /locus_tag="VIQ99_05090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY9182551.1"
                     /translation="MSRVGKKPVELGKDLSAEVKGQSVTIKGKKGSLTLDVGTQVEVT
                     VDGNLVKVAARSGGRIANVMAGTTRAHIANMVTGVTKGFEKKLELVGVGYRAAVQGQK
                     LNLTLGFSHPVEYPIPKGITIETPSQNEIIVKGMDRRHVGQVAADLRSYRPPEPYKGK
                     GVKYANERIELKEAKKK"
     gene            5659..6018
                     /gene="rplR"
                     /locus_tag="VIQ99_05095"
     CDS             5659..6018
                     /gene="rplR"
                     /locus_tag="VIQ99_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007233010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEY9182552.1"
                     /translation="MATTKKANRQRRARRTRVRISLQGVHRLCVHRTPQHIYAQIIAP
                     EGNRVVASASTLTKELRKSLKSTGNIAAATAVGKEIAARAKQAGIEKVAFDRSGFKYH
                     GRIKALAEAAREAGLNV"
     gene            6032..6520
                     /gene="rpsE"
                     /locus_tag="VIQ99_05100"
     CDS             6032..6520
                     /gene="rpsE"
                     /locus_tag="VIQ99_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002445361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEY9182553.1"
                     /translation="MANADEFQEKLVAVNRVAKVVKGGRQFGFTALTVVGDGNGRVGY
                     GYGKARELPQAIQKAMQAARKHLYTVALKKDTLQYELRGAHGATRVFMQPASEGTGVI
                     AGGAMRAVLECAGVRNVLAKSYGSRNPINVVRATMNALSQMRSPTQIAAKRGKTVEEI
                     FG"
     gene            6530..6736
                     /gene="rpmD"
                     /locus_tag="VIQ99_05105"
     CDS             6530..6736
                     /gene="rpmD"
                     /locus_tag="VIQ99_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002709740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEY9182554.1"
                     /translation="MAKAKAKTAGKKIRLTLLRSRFGRTPGHAQCASGLGLRHRHQTV
                     EVTDTPENRGMIDKIRYMLQVEEA"
     gene            6738..7172
                     /gene="rplO"
                     /locus_tag="VIQ99_05110"
     CDS             6738..7172
                     /gene="rplO"
                     /locus_tag="VIQ99_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEY9182555.1"
                     /translation="MRLNDLHPAKGSKFNHKRRGRGGGSGLGKTGGRGVKGQRARAGG
                     YHKVGFEGGQMPLQRRLPKIGFVSPTRDDKAELRVHELAQFAGKTADMAAVKAAHLVP
                     KRAVTVKVIASGKLDKAVTVSGLKVTAGARKIIEAAGGKVLE"
     gene            7180..>7739
                     /gene="secY"
                     /locus_tag="VIQ99_05115"
     CDS             7180..>7739
                     /gene="secY"
                     /locus_tag="VIQ99_05115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005960946.1"
                     /note="forms heterotrimeric complex in the membrane; in
                     bacteria the complex consists of SecY which forms the
                     channel pore and SecE and SecG; the SecG subunit is not
                     essential; in bacteria translocation is driven via the
                     SecA ATPase; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY9182556.1"
                     /translation="MAKAGTVNPTALLGDATRSADLRHRLLFLLGALIVYRIGTFIPV
                     PGIDPIQLEQFFQQQSGTILSMFNMFSGGALERLSIFALGIMPYISASIILQMGTHVI
                     PTLQQLRKEGESGRRKITQYTRYGTVVLASFQSVAAASALQTQGVVLTPGPGFVLTAA
                     ITLVTGTMFLMWLGEQITERGLGNGIS"
BASE COUNT         1588 a         2359 c         2611 g         1181 t
ORIGIN      
        1 cacaagggcg cgccgcacga gccgttgctc gagccgttcc gcaaacaagg cggccgcaac
       61 aaccagggtc gtatcacgac gcggcaccag ggcggtggac acaagcgcta ttaccgcgtc
      121 atcgacttca agcgcgacaa ggacggcgtc gccggcaaga tcgagcggct cgagtacgat
      181 ccgaatcgca cctcgtatct cgcgctggtg ctgtatgcgg acggagagcg ccgctacatc
      241 ctggcgccga agggcgcgaa agccggcgac ccgatcgcgt cgggcgtcga cgtgccaatc
      301 aagcccggca gcgcgctgcc gctcaagaac atcccgatcg gctcgctcgt tcactgcatc
      361 gagctgaagc cgggcaaggg cgcgcaaatg gcgcgcagcg ccggggcgtc cgtgcagctc
      421 gtcgctcgtg agggcgagta cgtgacggtc cgcttacgct cgggcgagat gcgcaaggtg
      481 cacgtgaatt gccgcgccac gatcggcgag gtcggcaacg acgagcacaa cctgcgcaag
      541 atcggcaagg ccggcgcgca gcgttggcgc ggaattcggc ccaccgtccg cggcgtcgtg
      601 atgaacccgg tcgatcaccc gcacggcggc ggtgaaggca agtccggtca gggtaacccg
      661 cacccggtct cgccgtgggg ccagaagacc aagggctaca agactcgccg caacaagcgt
      721 acgcgcaaca tgatcgtgcg cgaccgccgg cagaaatagt ttttagagag ccgaattaga
      781 gtacaaacca tgtcgcgttc gatcaagaaa ggcccgttcg tcgacgtcca cctgctcgac
      841 aaggtcgcga aggctgcggc cacgaacgac cgccggccca tcaagacgtg gtcgcggcgc
      901 tcgatgatcc tgccggacat ggtcggtctc acgattgccg tccacaacgg ccggcagcat
      961 gtgcccgtgc tcgtgtccga gaacatggtc ggccacaagc tcggcgagtt cgcgccgacg
     1021 cgcacgttca aggggcactc cggcgaccgc aaggtcgcgg ccacgcccgg tgccccgggc
     1081 gcacccggtg cggctcccgg cgctcctgcc ggcggcggtg ccggcggtgg tggcaagtcg
     1141 ggcggcggcg agaagtaagg gagcgtttga gtatgcaagt cgtcgccaag ctcatgtacg
     1201 cgcgcatctc gccgcagaag tgtcggctcg tcgcggacca gattcgcggc caatcggttg
     1261 cgagcgcgct gaagatcctc gcgttcagcc gcaagaaggc ggcgcgaatg atgcacaagg
     1321 tgctcgagtc ggccatcgcg aacgccgagc acaaccacgg cgccgacatc gacgagctca
     1381 aggtgtcgaa cgtgctcgtc gacgctgcac cgttcttcgc gcggtacgcc gctcgtgcca
     1441 agggccgcgg cgaccgcatc ttgaagcgca atagtcacat caccgtccga gtaggcgacg
     1501 agtaacctat gggtcaaaag gttcatccgg tcggcattcg cctcggcatc acgaaagagt
     1561 ggtcgtcgag gtggtatgcg aacacgcaga ccttcccggt ctacgtcgag caagatcacc
     1621 gcgtgcgcga attcttgcgc gcgaagctca aggaagcgtc gatcagccgc atccacatcg
     1681 agcggccggc caagaaggcc aacatcacga ttcacaccgc tcgccccggc gtcgtgatcg
     1741 gaaaaaaggg cgaagacatc gagaaactgc gcggcgaggt agcgaagctg ctcggcatgc
     1801 ccctgcacga cgtccggctc aacatcgccg agatccgcaa gccggagctc gatgcattgc
     1861 tcgtggccga gggcatagcc caacagctcg aacgccgagt gcagttccgc cgcgctatgc
     1921 gtcgcgccgt cacgaacacg atgcggatcg gcgccgaggg catcaaggtg cgcgtgtcgg
     1981 ggcgcttgaa cggagcggag atcgcgcgct cggagtggta tcgcgaaggc cgcgtgccgc
     2041 tgcacacgtt ccgcgccgac atcgactacg gtctcgccga ggcgcgcacg acgtatggcg
     2101 tgatcggcgt gaaagtttgg gtgttccgcg gcgaagtgcg cgaaggcgcg ccggcggagc
     2161 aggcgcccac ggatcaggcc gaagcgccgc gtccggctca ggcctgaggc gaagaccatg
     2221 ctgcaaccga aacgcacgaa attccgcaag caattcaagg gacgcaatcg tgggctcgcg
     2281 catcgcggta gctcggtcgc gttcggcgac tacgggctca agtccatcga gcgcggccaa
     2341 gtaacggccc ggcaaatcga ggccgcgcgc cgcgcaatga cgcgcttcgt gaagcgcggc
     2401 gggcacatct ggattcgcgt gttccccgac aagccgatca cgaagaagcc gctcgaagtg
     2461 cggcagggta agggcaaggg caacgtcgag tactgggtcg ctcaggtgca gcccggccgg
     2521 ctgttgtacg agattgccgg cgtgacggag gaagtcgcgc gtgaggcgtt cgcgctcgcg
     2581 gccgccaagt tgccgttgag taccacgttc gtcgaacggg ccgcaggctg atgaaagtca
     2641 aggaacagag aaaagcgttt cgcgagaagt cggacgccga gctcggcgaa gagctcctga
     2701 agcttcgccg cgagcagttc aacctgcgca tgcaggccgc gacgggtcag ggcgcgaagc
     2761 cggatcagca cggcaaagtg cggaagtcga tcgcgcgcct gaaaacggtg cagcgcgagc
     2821 gcgtcaagca gtagcgagta gagacatgag cgcagtagaa accccgcaga agccgactca
     2881 gcgtcccacg attggtcgcg tcgtcagcca caagatgcag aagagcgtca ccgtggccgt
     2941 agagcgcctc gtcaagcacc cggcgtacgg caagttcatt cgccggacga cgaaggtcat
     3001 ggcgcacgac gaggaaggca cgtgtcgtga aggcgacacg gtggcgatcg tggaatgccg
     3061 cccgatcagc aaacggaagt cgtggcgcgt cgtcgaggtc gtcgagcgtg ccccggtgga
     3121 gaccgaagcg taaggggccg ccatgattca gactcaaacc ttgctcaatg ccgccgacaa
     3181 cagcggcgct cgcagcctga tgtgcatcag ggtattcggc ggctccaagc ggcgctatgc
     3241 gcggatcggc gacatcatca aggtcacgat caaagacgcg attccgcgcg gccgcgtgaa
     3301 gaagggcgag gtgtaccacg ccgtggtcgt ccgcacgcgt cacgggttgc gccggcccga
     3361 cgggtcgttg atccgcttcg acggcaacgc ggccgtgctg ctgacgaaca agttcgagcc
     3421 gatcggcacg cgtatcttcg ggccggtcac acgcgagctt cgcacgacac agttcatgaa
     3481 gatcatctcg ctcgctccgg aagttctcta gggaccactt acatgcagcg catcaagaaa
     3541 ggcgaccagg tcatcgtgac gaccggcaaa gacaagggcc ggcgcgggac cgtgctgcgc
     3601 gtcgaggatg atggccgcat cgtcgtcgag aacgtcaacg tcgcgcacaa gcatcaacgg
     3661 ccgaacccgc agaagggcgt cgcgggtggc atcgtcgacc aggagaagtc gttgcatccg
     3721 tcgaacgtga tgctgttcaa ccccacgacc cagaaggccg atcgcgtcgg tttccgtcgg
     3781 ttgtccgacg gccgcaaggt gcggttcttc aagggcaacg acgaagtgtt ggatacctga
     3841 tatggcagca agactacaag agttctaccg caaggaggtc gtgccgcagc tgatgaagca
     3901 gctgaaggtc aagaacccca tggcggtgcc gcggatcacg aagatcacgc tgaacatggg
     3961 tgtcggcgaa gcgttggccg accgcaaggt gctcgagaac gcgatggccg acctcgcgaa
     4021 gatcagcggc cagaagcccg tggcttgcaa ggccaagaag tcggtcgcga gcttcaaggt
     4081 tcgcgacggc gttgcgatcg gctgcaaggt cacgttgcgc aaggcgcaga tgtacgtgtt
     4141 cctcgaccgc ctgatcagcg tcgcgatgcc tcggattcgc gactttcgcg gcgtgtcgcg
     4201 ccgcgcgttc gacggccgag gcaactacaa cctcggcgtc aaagagcaaa tcatttttcc
     4261 ggaaatcaat ttcgaccaag tggacgccat ccgtggtctc gacatttcga tcaccacgac
     4321 ggcgcgcaac gacgatgccg gccgggcatt gctcgaggcc ttcaagtttc cgctgcggag
     4381 tgatcgttaa tggctaagaa atcgatgctg atgcgccagc gccaccgcga gcaggcagtg
     4441 aagcgttatg ccgcgaagcg cgccgagctc aaggagctca ttcggaatcc gaggacgtcg
     4501 gaagacgaca agctcgaggc gcaaaagaag ctgcagaagc tgccgcgtga cgccaacccg
     4561 attcggctcc gcaatcggtg cgcgttgacg ggtcggccac acgggtatta ccgcaagttc
     4621 ggcctgtcgc gcacgaaact ccgcgagacc acgatgcgcg gcgagattcc gggcgtgcgc
     4681 aaggcaagtt ggtaaggatt ccgccatgag tatgaccgac ccgatcgccg acatgctgac
     4741 gcgcatccgc aacgcgcaag ttgcccgcaa gccgtccgtg gcgctgcccg catcgaagca
     4801 gaagctcgcc gtggccaagg tcctggagca ggaaggctat ctcgcgggcg tctccaccga
     4861 gaaggtggac ggcaaggaca cgctgacgct gacgctgaag tactaccagg atcggcccgt
     4921 gatcgagcga atcgagcgcg tgagccgtcc cggactcagg attttcaagc gcgccgacga
     4981 gctgccggtc gttcagggtg gtctcggcgt ggcgatcgtg tcgacgtctc aaggcgtcat
     5041 gacgaaccgc caggcgaagg cacaggggca cggcggcgaa gtgctctgca tcgtcctcta
     5101 atcacgaaac cgagttactg cgatgtctag agtaggtaag aagcccgtcg agctcggcaa
     5161 ggatctgagc gccgaagtga agggccaatc cgtcacgatc aagggcaaga agggcagctt
     5221 gacgctcgac gtcggcaccc aagtcgaggt caccgtcgac ggcaacctcg tcaaagtcgc
     5281 ggcgcgctcg ggcgggcgca tcgcgaatgt gatggcgggc accacgcgcg cccacatcgc
     5341 aaacatggtc acgggtgtca cgaagggatt cgagaagaag ctcgagctcg tgggcgtcgg
     5401 ttatcgcgcc gcggtgcagg gccagaaatt gaacttgacg ctcggtttct ctcaccccgt
     5461 ggagtacccc attccgaagg gcatcacgat cgagacgccg agccaaaacg agatcatcgt
     5521 gaagggcatg gatcgacggc atgtcggtca ggtcgccgcg gatctgcgca gctaccggcc
     5581 gccggagccc tacaagggta aaggcgtgaa gtacgcgaac gagcgaatcg agctcaaaga
     5641 agcgaagaag aagtagtcat ggctacgacc aaaaaggcaa accgtcaacg ccgcgcgcgc
     5701 cgcacgcgag tgcggatctc gctgcagggc gtccaccggc tgtgcgtgca ccgtacgccg
     5761 cagcacatct acgcgcagat catcgcgccc gaaggcaatc gcgtggtcgc gagcgcatcc
     5821 acgctgacga aagagctgcg caagagtctg aagtcgacgg gcaacatcgc ggccgctacc
     5881 gcggtcggca aagagattgc cgcgcgggca aagcaggcgg gtatcgagaa ggtcgctttc
     5941 gatcgctccg ggttcaaata tcacggccgc atcaaggcgt tggctgaagc cgcgcgcgaa
     6001 gcgggtctca acgtctagat agagctttca tatggcaaac gctgacgagt tccaagaaaa
     6061 gctggttgcg gtgaaccgcg ttgcgaaggt cgtgaagggc ggccggcaat tcggtttcac
     6121 ggcgctcacc gtcgtcggtg acggcaatgg ccgggtcggt tacggctacg gcaaggcgcg
     6181 cgagttgccg caagcgattc agaaggccat gcaggcggcg cgcaagcact tgtacacggt
     6241 tgcgctgaag aaggacacgc tgcaatacga gctgcgtggc gcgcacggtg cgacacgcgt
     6301 gttcatgcag ccggcgtccg aaggcacggg cgtcatcgcg ggcggcgcga tgcgcgcggt
     6361 gctcgagtgc gcgggtgttc gcaacgtgct cgcgaagagc tatggctcgc gcaacccgat
     6421 caacgtcgtt cgcgcgacga tgaacgcgtt gtcgcagatg cgctcgccga cgcaaatcgc
     6481 ggcgaagcgc ggcaagaccg tcgaagagat tttcggctaa gggtgcaacg tggcgaaggc
     6541 taaagctaag acagctggca agaagatccg cctgacgttg ctgcggagcc gcttcggtcg
     6601 tacgcccggc cacgcgcaat gcgcgagcgg gctcggcttg aggcaccggc accagaccgt
     6661 cgaggtcacg gacacgccgg agaatcgcgg catgatcgac aagatccgct acatgctgca
     6721 ggtcgaggag gcttgagatg cgcttgaacg atctacaccc ggccaagggc agcaagttca
     6781 accacaagcg gcgcggtcgc ggcggcggct cgggcttggg aaagaccggc ggccgcggcg
     6841 tgaaaggcca gcgcgcgcgt gcgggcggtt accacaaggt cgggttcgag ggcggtcaga
     6901 tgcccttgca gcggcgtctg ccgaagatcg gcttcgtttc gccgacgcgc gacgacaagg
     6961 ccgagctgcg cgtgcacgag ctcgcgcaat tcgctggcaa gacggccgac atggctgccg
     7021 tgaaggccgc gcacttggtc ccgaagcggg ccgtcacggt caaggtcatc gcctcgggca
     7081 agctcgacaa ggcagtcaca gtgagcggcc tcaaagtcac ggccggcgcg cggaagatca
     7141 tcgaagccgc cggcggcaag gtcctggagt aggttgatta tggcgaaagc gggtacggtc
     7201 aatccgactg cactgctcgg cgacgcaacg cggtccgccg atctccgcca tcgcctgctg
     7261 ttcttgctcg gcgcgttgat cgtgtaccgg atcggcacgt tcatcccggt gcccggcatc
     7321 gatccgattc agctcgagca gttcttccag cagcagtccg gcacgatcct gtcgatgttc
     7381 aacatgttct cgggcggtgc gctcgagcgg ctgtcgatct tcgcgctcgg gatcatgccg
     7441 tacatctcgg cgtcgatcat tctgcagatg ggcacgcacg tgatcccgac gctgcagcag
     7501 ctgcgcaagg aaggcgagtc ggggcggcgc aagatcacgc aatacacgcg ctacggtacg
     7561 gtcgtgctcg cgtcgttcca atcggtggca gccgcgagcg cgttgcagac tcagggcgtc
     7621 gtgctgactc cggggccggg cttcgtgctg acggccgcga tcacgctggt gaccggcacg
     7681 atgttcctga tgtggctcgg cgagcagatc acggagcgcg gcctgggcaa cggcatttc
//
LOCUS       DATCUD010000344         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10368, whole genome shotgun sequence.
ACCESSION   DATCUD010000344 DATCUD010000000
VERSION     DATCUD010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10368"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VIQ99_05120"
     CDS             complement(<1..707)
                     /locus_tag="VIQ99_05120"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEY9182557.1"
                     /translation="MRLDTHCAARAFHVLIVTVLVAAGSGGVRAQAPQPAAPQAAPVP
                     AAVPAAVAIPRPTEAEVRVARDSFAKFVASADAATRRVLEKYPGLLEVRPPGPNSAIL
                     PALAPQFQAKHQANLAVAQQGDAEILFLGDSITDFWRNADGPFAGKPVLDRYFGHWKL
                     ANFGIAGDTTQGVLYRLQNGEGQGFSPRAVMLMIGTNNTARNSAAEIAEGIGAVVLEL
                     QRDFPEAKILLLGVFPRG"
     gene            complement(776..1390)
                     /locus_tag="VIQ99_05125"
     CDS             complement(776..1390)
                     /locus_tag="VIQ99_05125"
                     /inference="COORDINATES: protein motif:HMM:NF023197.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 family protein"
                     /protein_id="HEY9182558.1"
                     /translation="MSMLIKPKALSGFVVVAALLVALGAGAQSQTTLAPAYAKPGVNL
                     RPYQQFLLLPLGVSDTRLVPPPWVENPNPREWDLTRKNRETLASSYASAVRAGIESEG
                     KFRVVTEPTPGTLQIEMRIVSLTPWASRAETDAQTLGSGTLTFEAHVRDAPTGELLFV
                     FQGTQQVGQDYQENTAYNKVAGLTDHFTNWGRNISRRLAEVQGR"
     gene            complement(1549..>1844)
                     /locus_tag="VIQ99_05130"
     CDS             complement(1549..>1844)
                     /locus_tag="VIQ99_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyruvate formate-lyase 1-activating enzyme"
                     /protein_id="HEY9182559.1"
                     /translation="PTLAFAERLAALRRNIWVRFVLVPGLTDDPGDIGNIAAFAAGLK
                     NVERVEVLPFHQMGRFKWRDLGIRYSLEDTEPPSAAAVEKAIGIFRAAGLEAY"
BASE COUNT          309 a          614 c          617 g          304 t
ORIGIN      
        1 cctcgcggga acacgccgag cagcaggatc ttggcctcgg gaaagtcgcg ttgcagctcg
       61 agcacgacgg cgccgatgcc ttcggcaatc tcggccgcgc tgtttcgcgc cgtgttgttc
      121 gtgccgatca tcagcatcac ggcgcgcggg ctgaatccct gcccttcgcc gttctgcagc
      181 cgatacagca cgccctgcgt cgtatcgccg gcgatgccga aattcgcgag cttccagtga
      241 ccgaaatagc ggtcgagcac gggcttgccc gcgaacgggc cgtcggcgtt gcgccagaaa
      301 tccgtgatcg agtcgcccag aaacaagatc tccgcgtcgc cttgctgcgc gaccgcgagg
      361 ttcgcttgat gcttggcctg gaactgcggc gcgagcgccg ggaggatcgc ggagttcggc
      421 cccggcggcc gtacctcgag caagcccgga tatttctcga gcacgcggcg tgtcgccgcg
      481 tccgccgacg cgacgaactt cgcgaagctg tcgcgcgcga ctcgaacctc ggcctccgtg
      541 ggacgcggaa tcgcgacggc cgccggcact gcggccggca cgggggccgc ctgcggtgcc
      601 gcgggctgcg gcgcctgcgc ccgcacgccg ccggacccgg cagcgacgag cacggtgacg
      661 atcaggacat ggaacgcgcg cgcggcgcaa tgcgtatcga gacgcatatc gaccccctcg
      721 gttgagcgcc gtcgcacggc gcgagccgcg cgacgtgagt gacgacagcg agccgttatc
      781 ggccctgaac ctcagcgaga cggcggctga tgtttcggcc ccagttcgtg aaatggtcgg
      841 tcaaccctgc gaccttgttg tacgcagtgt tctcttgata gtcctgcccg acctgctgcg
      901 tgccttgaaa cacgaacaag agctcgcccg taggcgcatc gcggacgtgg gcttcgaacg
      961 tcaacgtgcc cgagccgagc gtctgcgcat cggtttcggc acgcgacgcc cacggcgtga
     1021 ggctcacgat ccgcatctcg atctggagag tcccgggcgt gggctcggtg acgactctga
     1081 acttgccttc ggattcgatg ccggcgcgca cggcgctcgc atacgacgac gcgagcgtct
     1141 cgcggttctt gcgggtcaaa tcccactcgc gcggattcgg attctcgacc cacggcggcg
     1201 ggacgagacg cgtgtcgctg accccgagcg gcaacagcaa gaactgttga tatggccgta
     1261 ggttcacacc gggcttcgcg tacgcgggag ccaacgtggt ttgggattgc gcgccggccc
     1321 cgagcgctac cagcagcgct gcgaccacca cgaacccgct gagcgctttc ggcttaatca
     1381 gcatcgacat tagtcaagac ccctatgagt tattggtatc gcccagaaac gtgccgtcgc
     1441 cgaagccgcc gctatgctgg gacgccggaa atcataactc aactggccgg aggttcgtcg
     1501 gggtgcggtg gccgcgacgg ccgtggcagc cgtaccgaac cgttccgact agtacgcttc
     1561 caggcccgcg gcgcggaata tcccgatggc cttctcgacg gccgcggccg acggcggttc
     1621 ggtgtcctcg agtgagtaac ggataccgag gtcgcgccat ttgaagcggc ccatctggtg
     1681 gaacggcaaa acctcgactc gctcgacgtt cttgagaccg gccgcgaacg cggcgatgtt
     1741 gccgatgtcg ccgggatcgt cggtgagtcc cggcacgagc acgaagcgaa cccagatgtt
     1801 gcgccgcaac gcggcgaggc gctccgcgaa cgcgagcgtg ggac
//
LOCUS       DATCUD010000345         2585 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88637, whole genome shotgun sequence.
ACCESSION   DATCUD010000345 DATCUD010000000
VERSION     DATCUD010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2585
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88637"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..693)
                     /locus_tag="VIQ99_05135"
     CDS             complement(<1..693)
                     /locus_tag="VIQ99_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003167648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9182560.1"
                     /translation="MSTHSAISRAVRAALFGSGALTATIGCGLLTATPAGAQPSQEGQ
                     DVVVVTGSRIRRDTFNSPSPVQVITRDEVLAAGFNSTTEALQSTAVTTGAAQVNNAFG
                     GFVTDGGPGANTLSLRGLGAGRTLVLINGRRVSPAGTRGAVGSADLNVLPNAMISHVE
                     VLRDGASSIYGSDAIAGVVNVVTLDQLDGVTFEAQHNGPLDGGGEQTRVSIVGGLSGE
                     RWSFGGSLEFYDR"
     gene            complement(936..2321)
                     /locus_tag="VIQ99_05140"
     CDS             complement(936..2321)
                     /locus_tag="VIQ99_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182561.1"
                     /translation="MRMSCKAAAAAVAVLFVSHAGAQPASSVGRGAPLLVELPHPKGT
                     SARLAEYLADYPIVGPFRLKAGDKTIDVGSAFDGATPTGVTPLPVDIFTTKDFYRDRA
                     LWSDPRYFRCNSSLAVEQQRGASNFSRVTILAGPETAAWGYCDRDYPREAIVSPYAFA
                     TAGAHYEALLAEARRRGGPTEQTRETLPLEWNGRYGGISVETAFGTWYGMLWNQIPTI
                     LSLLTDEYRTRMVQQVFHEGTTNAAQWPGMYCWPEGFMRRFHFAGTGVHQIMVTPKLV
                     QIMTSSSGNYVTHIHIGRQFNMDGDVPRLGADVPRWYGETIGFWDRDALITWTSNIQG
                     WASHGVFEFSSKMQTIEIYTPSRGANGELVGVHHETVFYDPEALVQPIRIVRDFAKQS
                     DFDEGDPYVFPECLQTIYPINGLATPVAPPSTIRYDVLDMYNRPWAQLWERYWEQGMS
                     RPEPEDIFTFE"
BASE COUNT          420 a          886 c          836 g          443 t
ORIGIN      
        1 gcggtcatag aactccaagg atccgccgaa agaccagcgc tcgccggaca agccgccgac
       61 gatcgacacg cgcgtctgct cgccgccccc gtccagtggg ccgttgtgct gcgcctcgaa
      121 cgtcacgcca tcgagctggt ccagcgtgac cacgttcacg acgcccgcga tcgcatccga
      181 cccatagatc gaggaggcac cgtcgcgcag cacctcgacg tggctgatca tcgcgttcgg
      241 cagcacgttc aaatccgccg aaccgacggc gccgcgcgtg ccggccggag acacgcgccg
      301 gccgttgatc agcaccagcg tgcgcccggc gcccaagccg cgcagcgaca gcgtgttcgc
      361 gcccggacca ccgtccgtga cgaagccgcc gaacgcgttg ttgacctgtg cggcgccggt
      421 cgtaacggcg gtgctctgca acgcttcggt cgtcgagttg aagcccgcgg ccaagacctc
      481 gtcgcgcgtg atgacttgca ccggcgacgg cgagttgaac gtgtcgcgcc ggattcggga
      541 tccggtgacg acgacgacgt cttgtccttc ctgactcggc tgcgccccgg ccggcgtggc
      601 cgtgagtaga ccgcagccga tcgtcgccgt gagggcccct gatccaaaca gagctgcacg
      661 aactgcgcgc gaaatggcac tgtgagtaga cattgcgact tcccccctga ttggttatcg
      721 cagttgttgt tcttgcagac ggccaccacc ccgcagccgt cgttcgccga cagccatcac
      781 cccgacgcct gtcagcgagc ctcttagatg gtacgcccaa atctggcgcg caggacaacc
      841 tgacgggtat tccggccgtc cagcccgcct tggcggccgg accgggtcgg ctgccgcggt
      901 gcccgttgcg ggacggtcct cgattccgcg cgggtctact cgaaagtgaa aatatcttcg
      961 ggctcgggcc tactcatgcc ttgctcccag tatctttccc agagttgcgc ccaaggccgg
     1021 ttgtacatat cgagcacgtc gtaacggatc gtgctcggcg gggccaccgg cgtcgcgagc
     1081 ccgttgatcg gatagatcgt ctgcaagcac tccgggaaca cgtacggatc gccttcgtcg
     1141 aaatcgctct gcttcgcgaa gtcgcgcacg atccggatcg gctgcacgag cgcctcggga
     1201 tcgtagaaca cggtctcgtg atgcacgccc acgagctcgc cgttcgcgcc gcggctcggc
     1261 gtgtagatct cgatcgtctg catcttgctc gagaactcga acacgccgtg cgacgcccag
     1321 ccctggatgt tcgacgtcca cgtgatcagc gcgtcgcgat cccagaagcc gatcgtctcg
     1381 ccgtaccagc gcggcacgtc ggcgccgagg cgcggcacgt cgccgtccat gttgaactgg
     1441 cggccgatgt ggatgtgcgt gacgtaatta cctgacgacg aagtcatgat ctgcacgagc
     1501 ttcggcgtca ccatgatctg gtgcacgccg gtgcccgcga aatggaaccg gcgcatgaac
     1561 ccctcgggcc agcagtacat cccgggccac tgcgccgcgt tcgtcgtgcc ctcgtggaac
     1621 acctgttgca ccatccgggt tcgatactcg tcggtcagca acgagaggat cgtcggaatc
     1681 tggttccaga gcatgccgta ccaagtgccg aaagccgtct cgaccgagat gccgccgtag
     1741 cggccgttcc attcgagcgg caacgtctcg cgcgtctgtt ccgtgggccc gccgcgacgg
     1801 cgcgcctcgg cgagcagcgc ctcgtaatgc gccccggccg tcgcgaacgc atacgggctc
     1861 acgatcgcct cgcgtgggta gtcgcgatcg cagtagcccc aggccgcggt ctcgggcccg
     1921 gccaggatgg tcacgcggct gaagttgctc gctccgcgct gctgctcgac ggcgaggctg
     1981 ctgttgcagc ggaaatagcg cgggtcgctc cagagcgctc ggtctctgta gaagtccttc
     2041 gtcgtgaaga tgtcgacggg caacggcgtg acgccggtcg gcgtcgcacc gtcgaacgcc
     2101 gagccgacat cgatcgtctt gtcgccggcc ttgagccgaa acgggccgac gatcgggtag
     2161 tcggcaaggt actcggccag ccgcgccgag gtgcccttcg gatgaggcaa ctcgacgagc
     2221 aagggtgcgc cgcggccgac gctgcttgcg ggctgcgcgc cggcgtgcga gacgaacagg
     2281 acggcgaccg ctgccgcggc cgctttgcac gacattctca tgtgcccccc ggaaccgtcg
     2341 agaacctgct tctcgcgtag agcattccac aaatacgctc gtggttcctg gcagcgccag
     2401 cactggtcag ccggcgggcg tcttgtcgcg aacggcgatg cggccgggat cagctcgcat
     2461 ggctcgatga cgagcgcgtc gtcgccggcg ctcgtacgtt gacgctccac ggtgggagtg
     2521 cactcgccgg tttgctagag tcgccgcatg gcggaacgca cacagctcct cgcgcgcggc
     2581 gtctc
//
LOCUS       DATCUD010000346         2616 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53145, whole genome shotgun sequence.
ACCESSION   DATCUD010000346 DATCUD010000000
VERSION     DATCUD010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2616
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53145"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VIQ99_05145"
     CDS             <1..288
                     /locus_tag="VIQ99_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018411992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY9182562.1"
                     /translation="NSPALDAQDRDSEAIPEIALHRFFQTLGTPYQAYQADVPEDLAK
                     AVADVGKQQNLPLDFVERIPRQDYSRYFVAVAAFACLMLLAYRSMLLRSWV"
     gene            285..815
                     /locus_tag="VIQ99_05150"
     CDS             285..815
                     /locus_tag="VIQ99_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020165722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MxaK protein"
                     /protein_id="HEY9182563.1"
                     /translation="MRRRTIHSAFGAAAIGFALIAAYQGVRWHQANRVNEGIANASVA
                     RFDAGVAEAQFARALALSESGDPGAALQIYKALIQGDRADLKRAALYNVGNLHLREAM
                     KSGPDEAARSLPLIELAKQSYRTLLRIDPSDWDARYNLERALWLAPEVEEAAVNEPPE
                     PPQRATTTAPGRIMLP"
     gene            812..1738
                     /locus_tag="VIQ99_05155"
     CDS             812..1738
                     /locus_tag="VIQ99_05155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018230316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY9182564.1"
                     /translation="MRIGALLAGAFDNQSRTISAALVLLLLACAAPVFNWPRATYDYI
                     VVFDITQSMNVEDYRSNDSPASRFAYAREATRRALRDLPCGSRVGWGAFAEYRALLLL
                     APIEVCANYDDLLASLDKIDGRMRWGDASEVSKGVLWSIRAAKETSGHPNVIFLSDGH
                     EAPPLGPGDRPVFDDVKPGDVHGWLMGVGGYTPKPIPRTDEEGKVIGYWRAEDVIQVD
                     SGLDDGTASREHLSTLRERHLRALAERVGFEYARLIGPESISEAMRDPRFARARPVPI
                     DLYWVPVAAALLLLVICFRPDVRRGSANGTDG"
     gene            complement(2051..2293)
                     /locus_tag="VIQ99_05160"
     CDS             complement(2051..2293)
                     /locus_tag="VIQ99_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182565.1"
                     /translation="MLNFKVDTLTTVSRATLRRMAKALGFSETQAVHFALARLREDAL
                     RGEADEGYPALTKAQLAAIGGHEPKRKGQTLSSTLK"
BASE COUNT          447 a          815 c          882 g          472 t
ORIGIN      
        1 aacagccccg cgctcgacgc gcaagatcgc gacagcgaag caatcccgga aattgcgttg
       61 caccgcttct tccagacctt ggggacgccg tatcaagcct atcaggccga cgtccccgag
      121 gacctggcga aggccgtcgc cgacgtcggg aagcagcaga atctgccgct cgatttcgtc
      181 gagcggatcc cccggcagga ctacagtcga tatttcgtcg cggtcgccgc gttcgcctgc
      241 ctgatgttgc tcgcctatcg atcgatgctg ctcaggagct gggtatgagg cggcgcacga
      301 ttcattccgc attcggtgcg gccgcgatcg ggttcgcgtt gatcgccgcg taccagggcg
      361 tgcgctggca tcaggcgaac cgagtcaacg aaggcatcgc gaacgcgagc gttgcacgct
      421 tcgacgccgg cgtggcggag gcgcaattcg cgcgggcgct cgctctgtcc gagtcgggcg
      481 atcccggagc ggcattgcag atctacaagg cgctcatcca gggcgaccgt gccgacctga
      541 agcgggcggc gctctataac gtggggaact tgcacctgcg cgaggcgatg aagagtgggc
      601 ccgatgaagc cgccagatcg ttgcctctga tcgagctcgc caaacagagc tatcgcactc
      661 tgctgcgtat cgacccgagc gattgggacg cgcgctacaa cctcgaacgt gcgctttggc
      721 tcgcgcccga ggtcgaagag gctgccgtga acgagccgcc cgaaccgccg caacgcgcga
      781 ccaccacggc gcccgggagg atcatgctgc catgaggatt ggcgcactgc tcgcgggcgc
      841 attcgacaac cagtcgcgca caatctcggc ggcgctcgtg ttgctgctgc tcgcctgcgc
      901 cgcgccggtg ttcaactggc cgcgtgcgac ctacgattac atcgtcgtct tcgacattac
      961 gcagagcatg aacgtcgagg attaccggag caatgattcg cccgcgagtc gcttcgcgta
     1021 tgcgcgtgaa gctacgcggc gcgcgctgcg cgatctgccc tgcggctcgc gtgtcggttg
     1081 gggcgccttc gctgagtacc gcgcgctcct cctcctcgcg ccgatcgagg tctgcgccaa
     1141 ctatgacgac ttgctcgcat cgcttgacaa gatcgacggc cgaatgcgct ggggcgacgc
     1201 gagcgaagtg tcgaagggcg tgctctggtc gatacgcgcg gcgaaggaaa cgagcggcca
     1261 tccgaacgtc atctttctga gcgacgggca cgaggcgccg cccctcggcc ccggggatcg
     1321 cccggtgttc gacgatgtga agcccgggga cgtccacggc tggctgatgg gggttggcgg
     1381 gtacacgccg aagccgattc cacggaccga cgaggagggg aaggtgatcg gctattggcg
     1441 cgccgaagat gtcatccagg tcgatagcgg tctcgacgac ggcacggcga gtcgcgagca
     1501 tttgtccacg ttgcgcgagc gccatctacg cgcgctcgcc gagcgggtcg gattcgagta
     1561 cgcgcgtctg atcgggcctg aatcgatcag cgaggccatg cgcgatcctc ggttcgctcg
     1621 ggcgaggccg gtgccgatcg atctctattg ggtgccggtg gccgcggcgt tgctgctgct
     1681 cgtgatctgc tttcgccccg atgttcgacg cggtagcgcc aacggcacgg acggttgacc
     1741 gtccgcgccg ggtccgattg cagaagtacg aactgcggat caactgacgt acgtgcaagg
     1801 agggagggga gggcgccctg tgatgcgcaa atactcgatc acgcgagcgc aggtgcgact
     1861 ctgagatcgg gcactcgcgg cgaatcgtgt ggatcagcct ttcgcaagtg gcattagcca
     1921 tcgggctgca taccggcgtc ttgaggacct tgacaccgag ccgttcgatc ggctcatcga
     1981 ggctcttcgc gaagatgcgg tcccgatcgt ggatcaggta gcggtagcgg tcctcgccac
     2041 ggccgcccgc tcatttcaac gtgctgctga gtgtttgccc cttgcgcttc ggttcgtgcc
     2101 cgccgatcgc ggcaagctgc gccttggtca gcgcgggata accctcgtcg gcttcgcccc
     2161 gcagcgcatc ttcgcgcaat ctcgcgagcg cgaagtgcac ggcctgggtt tcggagaatc
     2221 cgagcgcctt cgccatccgg cgcagggttg cgcgactgac cgtggtcagc gtgtcaacct
     2281 tgaagttgag caagagcgct tctttcctcg atgcgggggt cgtcatggtg ttggctatcc
     2341 tggcagcgcg gcgttcaagc cctgcgaccc aagtgcgggt cggggcgcgc gcccagcatt
     2401 ggcgcctatc gcgcggtctc atgtcgcacg agacatctga tcgcgccaaa aagggggtgc
     2461 gcggcgtgta cctatcgtgc tacgagacaa acggtatgcg aaacgatata ttgtcgagcg
     2521 cttcgggaag ggtgcgaaag gcccgacaac aggctggctt ggagcatgcc gaccagcaag
     2581 cgattgcatc agacagagct cgacgccggc gagtac
//
LOCUS       DATCUD010000347         1898 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_31893, whole genome shotgun sequence.
ACCESSION   DATCUD010000347 DATCUD010000000
VERSION     DATCUD010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31893"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1727)
                     /gene="gyrB"
                     /locus_tag="VIQ99_05165"
     CDS             complement(<1..1727)
                     /gene="gyrB"
                     /locus_tag="VIQ99_05165"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEY9182566.1"
                     /translation="MSQNEYTSKNIKVLKGLEAVRKRPGMYIGDTDDGTGLHHMVFEV
                     VDNSVDEALAGHCKEISVTIHADESVTVVDDGRGIPVDIHPEEGRSAAEVIMTVLHAG
                     GKFDDDSYKVSGGLHGVGVSVVNALSEVLVLTIHRNGVLYEQTYHLGDPDAPLAAVGK
                     TDRTGTTIRFKPSATIFSNIVFDYDTLAKRLRELSFLNSGVRIKLSDEREDRHDVFEF
                     AGGIEAFVRHLNRNKTPIHPTIVYFSETRATIQVEVAFQWNDGYQEGMFCYTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYIEQEGIGKREKIAMSGDDSREGLTAVLSVKLPDPKFSS
                     QTKDKLVSSEVKSVTEGVVAQRFEEFLLEHPAEAKAIVGKIIEAARAREAARKAREMT
                     RRKGALDVAGLPGKLADCQEKDPALSELFLVEGDSAGGSAKQGRDRRTQAVLPLKGKI
                     LNVEKARFDKMLQSPEVGTLITALGCGVGRDEFDVNNLRYHRIIIMTDADVDGSHIRT
                     LLLTFFYRQMPALIERGHVYIAQPPLYKLKRGKQEHYVKDDGELNSMLLTSATADASL
                     FAEPGAPPIT"
BASE COUNT          323 a          601 c          573 g          401 t
ORIGIN      
        1 gtgatcggtg gcgcgcctgg ctcagcgaac agagacgcgt cggccgtcgc gctcgtgagc
       61 agcatcgagt tcagctcgcc gtcgtctttc acgtagtgct cttgcttgcc gcgtttgagc
      121 ttgtagagcg gcggctgggc gatgtagacg tgcccgcgct cgatcaacgc cggcatttgg
      181 cggtagaaga acgtcaacag cagcgtgcgg atgtgcgagc cgtcgacgtc ggcgtcggtc
      241 atgatgatga tgcgatggta gcggaggttg ttgacgtcga actcgtcgcg ccccacgccg
      301 cagcccaatg ccgtgatcag tgtcccgact tcgggcgact gtaacatctt gtcgaatcta
      361 gctttttcga cgttcaggat cttgcctttg agcggcagca ctgcctgcgt acgccgatcg
      421 cggccctgtt tggccgagcc acctgccgag tcgccctcga ccagaaacaa ctccgacaag
      481 gccgggtcct tttcttgaca gtcggcgagc ttacccggta atcccgcgac atcgagcgcg
      541 cctttgcggc gcgtcatctc gcgtgccttg cgcgcggctt cgcgcgccct cgccgcttcg
      601 atgatcttgc cgacgatcgc cttggcctcg gccgggtgct cgagcaggaa ttcctcgaag
      661 cgttgcgcga cgactccctc ggtcacggat ttcacttcgg aagagacgag cttgtccttc
      721 gtctgcgaag agaattttgg atccggcagc ttcacggaca gcaccgccgt gaggccctcg
      781 cgcgaatcgt cacccgacat cgcgatcttc tcgcgcttgc cgatgccctc ctgctcgata
      841 tacgcgttca acgtgcgcgt catcgccgcg cggaaaccag ccaggtgagt accgccatcg
      901 cgctgcggga tgttgttcgt gtagcaaaac atcccttcct ggtagccgtc gttccattgg
      961 aacgcgacct ccacttggat ggtggcgcgt gtttcggaga aatacacgat cgtcggatga
     1021 atcggcgtct tgttccgatt caagtgcctg acgaacgctt cgatgccgcc tgcgaattcg
     1081 aatacgtcgt ggcggtcctc gcgctcatcg gacagcttga tccggacgcc ggaattcagg
     1141 aacgacagct ccctcaggcg tttcgcgagc gtgtcgtagt cgaaaacgat gttggaaaaa
     1201 atcgttgcgc tgggcttgaa ccggatcgtc gtcccggtgc ggtccgtctt gccgaccgcg
     1261 gccaacggcg catcggggtc gccgagatga taggtttgct cgtagagcac tccgttgcgg
     1321 tggatcgtca ggaccaggac ttcggacagg gcattcacga cggatacgcc gacgccgtgc
     1381 aggccgcccg agaccttgta actatcatcg tcgaacttac cgccggcatg cagcacggtc
     1441 atgatgacct cggccgccga gcgcccctcc tcggggtgga tgtcaaccgg aatgccgcgg
     1501 ccatcgtcga cgacggtcac cgactcgtcg gcatgaatcg tgacggatat ttccttgcaa
     1561 tgccccgcca gggcctcatc gacggagttg tcgacgacct cgaagaccat gtggtgcaag
     1621 cccgttccgt catcggtatc cccgatgtac atcccaggcc tcttgcggac ggcctctagc
     1681 ccctttaaga ccttgatatt cttagaggta tactcgttct gactcatccg ccccactctg
     1741 tctgttgtcg cgacattata ccgtgcgcag ttcaccctgt tccacgtgga acacaggccg
     1801 tcccggcgcc ggcggcagct ggctcggcgt cagcgccgtg agcacgagct gcgcggggag
     1861 atccgccatc gccgcgagca ggcgctctaa cgcggtcg
//
LOCUS       DATCUD010000348         3187 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17718, whole genome shotgun sequence.
ACCESSION   DATCUD010000348 DATCUD010000000
VERSION     DATCUD010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3187)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3187)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3187
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17718"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(338..1900)
                     /locus_tag="VIQ99_05170"
     CDS             complement(338..1900)
                     /locus_tag="VIQ99_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009958444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HEY9182567.1"
                     /translation="MSPALTMFLGFIAITLWITWWAARRNTGSSAYFAAGRSLAAWQN
                     GVAVAGDYMSAASFLGIAGIIAFQGYDGFMYSVGWLVAYLTVLLIVAEPLRNAGKYTM
                     ADVLAYRLSPRPVRAMGALSTLTVSTFYMIAQMVGAGALVSLLLRDTGIGYETAVIGI
                     GVLMIVYVVFGGMLATTWVQIVKAILLMAGTVLLSLLVLGHYGFDFGAFFDAIGRVTY
                     TDAAGNQVTRDFMTPGLRYTPPYGALDLISLGMALILGTAGLPHILVRFYTVPDAQTA
                     RKSVVWAMLIIGSFYILTTFLGFGAATIVGRDFIAGNGGTNMSAPLLAQALGGDLFFA
                     FISAIAFATILAVVAGLTISASTSFAHDFWTNVLHRGRERREGEEVRVARVTAFFVGA
                     ISIGIAIALGPNANVAFLVALAFAVAASANLPVIVLSLLWRRFNTAGAVCGLATGLVS
                     SLVLIVISPSIMRADAIFPLENPGIVSIPLGFLGAVAGTYLRREPAAEHKFAELSVRA
                     NTGLGAERAAGH"
     gene            complement(1900..2328)
                     /locus_tag="VIQ99_05175"
     CDS             complement(1900..2328)
                     /locus_tag="VIQ99_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018131714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HEY9182568.1"
                     /translation="MEHEPRSTDPTPDTGSATDVAPLGRRSAKPMHEQTADEDVDVAD
                     WERVAALDEFKALLKAKRKFIVPATVFFIVYYFSLPVLVGYAPQWMATKVFGVVNVAY
                     LFALSQFFVAWILAWAYVRAAARFDGMAQRLIAGLKRGPR"
     gene            2536..>3187
                     /locus_tag="VIQ99_05180"
     CDS             2536..>3187
                     /locus_tag="VIQ99_05180"
                     /inference="COORDINATES: protein motif:HMM:NF019121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY9182569.1"
                     /translation="MSPSCIGTLAFRMDITILAYLEPDEERPDVVVEQVAAALAASGH
                     KTSVLTIRHDLNELIDGLKARKPQLVFNLVESFGDDIMGGVIGVAGVLDLLQIPYTGG
                     GPGEIFLQEDKALTKKLLAFEGIRYPDFATFPANAAFETGGNLRMPLFVKPLRMDASI
                     GIDERSLVRNTQQLMERVLYIQRTWGDAALAEEYIEGREFYVGVIGNDELIAFPPIE"
BASE COUNT          599 a         1046 c         1059 g          483 t
ORIGIN      
        1 ccgccgccac cgccgccgcc accgccgcca ccaccgcaac cggcggtcac gacaaccagc
       61 agagccaaca cggtccagcg gggaatattg ttcttggcca tgcgacgatc ctgccgggaa
      121 acgcgtggca ttctgccaga agcgcgcgca gcctggtcac tgcgtcgaat tatgtccgag
      181 gagtggaccg ccaagtcgcg gaagcgctcg gtgcccggcc gcgcgcctgg cgcctaaccg
      241 ggcattcgcg cgcaagccga gcagtgcggc gacgccgtta gccggccttg tctagatgca
      301 cgctgatcgt cgaggcacga acgcgggccg tgatcgctca gtgcccggcc gcgcgctcgg
      361 cgccgagtcc cgtgttcgcg cgcacgctga gctccgcgaa cttgtgctcg gcggccggct
      421 cgcggcgcag atacgtgccc gcgacggccc ccaagaatcc gagcgggatg ctgacgatgc
      481 cggggttctc gagcgggaag atcgcgtcgg cacgcatgat gctcgggctg atcacgatca
      541 gcacgagcga cgacacgagc ccggtcgcga gcccgcacac ggcgcccgcg gtgttgaacc
      601 gccgccacag gagcgacagc acgatcacgg gcagattcgc ggaggctgcg accgcgaacg
      661 cgagcgcgac gaggaatgcg acgttcgcgt tcggccccag cgcgatcgcg atgccgatcg
      721 agatggcgcc cacgaagaac gccgtgacac gcgcgacccg gacctcctcg ccttcgcggc
      781 gctcgcggcc acggtgcagc acgttcgtcc agaagtcgtg cgcgaacgac gtcgacgccg
      841 agatcgtgag ccccgcgacc acggcgagaa tcgtcgcgaa cgcgatcgcg gagatgaacg
      901 cgaagaacag atccccgccg agcgcttgcg cgagcagcgg tgcgctcatg ttcgtgccgc
      961 cgttgccggc gatgaagtcg cggcccacga tcgttgccgc gccgaagccc agaaacgtcg
     1021 tcaggatgta gaagctgccg atgatcagca tcgcccacac gacgctcttg cgagccgtct
     1081 gcgcgtcggg cacggtgtag aaccgcacga ggatgtgagg caaccctgcg gttcccagga
     1141 tcagcgccat gccgagcgag atcaggtcga gagcgccgta cggcggcgtg tagcggagcc
     1201 ccggagtcat gaagtcgcgt gtgacctgat tgcccgccgc atcggtgtat gtgactcggc
     1261 ctatcgcgtc gaagaacgcg ccaaaatcga agccgtaatg gccgagcacg agcagcgaga
     1321 gcagcacggt gccggccatg agcaggatcg ccttcacgat ctgcacccac gtcgtcgcga
     1381 gcatgccgcc gaacacgacg tacacgatca tcagcacgcc gatgccgatt accgcggtct
     1441 cgtagccgat gccggtgtcg cgcagcagca gcgacacgag cgcgccggcg ccgaccatct
     1501 gcgcgatcat gtagaacgtg ctcacggtca gcgtcgataa cgcgcccatc gcgcgcacag
     1561 gccgcgggct caggcgatac gcgagcacgt cggccatcgt gtacttgccc gcgttccgca
     1621 gcggctccgc gacgatcagc agcaccgtca gatacgcgac gagccagccg acggaataca
     1681 tgaagccgtc atagccctga aacgcgatga tgccggctat gcctaagaac gacgccgcac
     1741 tcatgtagtc gccggcgacc gcgacgccgt tttgccacgc ggcgagggag cggcccgcgg
     1801 cgaaatacgc gctcgagccg gtattgcggc gcgcggccca ccacgtgatc cataacgtga
     1861 tcgcgatgaa gccgaggaac atcgtgagtg ccggcgacat cagcgggggc cccgtttgag
     1921 gccggcaatc aagcgctgcg ccatgccgtc gaagcgcgcc gcggcgcgga cgtaggccca
     1981 cgcgagaatc caagcgacga agaattgcga cagcgcgaac aggtacgcga cgttgacgac
     2041 gccgaagacc ttcgtcgcca tccattgcgg ggcatagccg acgagcacgg gcagggagaa
     2101 gtagtagacg atgaaaaaga ccgttgccgg aacgatgaac ttgcgtttcg ctttcagcag
     2161 tgccttgaac tcatcgagag ccgcgacacg ctcccagtcg gcgacgtcga cgtcctcgtc
     2221 ggccgtttgc tcgtgcatgg gtttggccga ccggcggccg agcggtgcga cgtccgtggc
     2281 cgagcccgtg tcaggcgtcg gatccgtgct gcgcggctcg tgctccatcg tcgcggcggt
     2341 atcgcgacta gcgcttcgag acgatggtcg aggatttcgg cacgcggcaa gcctatcccg
     2401 actcgcaacg cggattcaac gcgtcgagcg cgatccagcg tgcggcacgt cgcacctggg
     2461 cggtcgaagc gagcgcgaga tgtgccatag tcgattgtcc gcgacggtgt ctgtcgatta
     2521 gagtccgcga gtggtttgag cccaagttgc atcggcacgc tggccttccg catggacatc
     2581 acgattcttg cgtatctcga gcccgacgaa gagcgaccgg acgtggtcgt cgagcaagtc
     2641 gctgccgcgc tcgccgcgag cggccacaag acgtcggtcc tcacgatccg ccacgacttg
     2701 aacgagctca tcgacggctt gaaagcccgc aagccgcagc tcgtgttcaa tctcgtggag
     2761 tcgttcggcg acgacatcat gggcggtgtg attggcgttg cgggcgtgct cgatctcttg
     2821 cagattccgt acacgggtgg cgggcccggc gagatcttcc tgcaagagga caaggcactc
     2881 acgaagaagc tgctggcatt cgagggcatt cggtacccgg atttcgccac gttcccggcc
     2941 aacgccgcgt tcgagaccgg cggtaacctg cgcatgccgc tgttcgtgaa gccgttgcgc
     3001 atggatgcat cgatcggcat cgacgagcgc tccctcgtgc gcaacacgca gcagctcatg
     3061 gagcgcgtgc tctatataca gcgcacgtgg ggcgacgcgg cgctcgccga ggaatatatc
     3121 gagggccgcg agttctacgt cggcgtgatc ggcaatgacg agctgatcgc cttcccgccg
     3181 atcgaga
//
LOCUS       DATCUD010000349         3442 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102750, whole genome shotgun sequence.
ACCESSION   DATCUD010000349 DATCUD010000000
VERSION     DATCUD010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102750"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VIQ99_05185"
     CDS             <1..269
                     /locus_tag="VIQ99_05185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002685742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEY9182570.1"
                     /translation="RHVDANLERRLTFDRVRGSDSPLLQLSTREFEIFCLLAEGVSSA
                     DIAKRLSLSPKTVANYSTQLKGKLNVGSAAEFARLAIRHGIMRP"
     gene            299..1297
                     /locus_tag="VIQ99_05190"
     CDS             299..1297
                     /locus_tag="VIQ99_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012471034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEY9182571.1"
                     /translation="MLAMRLHGPRAGLSRDEIPTPEPETDQVLIEVGACGVCRTDLHV
                     LDGELPNARYPVTPGHEIVGRVARVGAGVTRWRVGDRVGVPWLAHTCGACAYCERGLE
                     NLCDQATFTGYTAPGGYAQYVTADARYCLAVPARYSDVAAAPLLCAGLIGFRAYRAAG
                     DARRLGLYGFGAAAHLLTQVACAEGREVYAFTRPKDSAGQTFARRQGASWVGGSDEGP
                     PAPLDAAIIFAPVGALVPAALSAVRKGGRVVCAGIHMSDVPSFPYRLLWGERSLVSVA
                     NLTRDDGERFMRVAAAVDLTPSVEALPLTEANEALTRLRAGRVEGAAVLVPERRTS"
     gene            complement(1294..1494)
                     /locus_tag="VIQ99_05195"
     CDS             complement(1294..1494)
                     /locus_tag="VIQ99_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HEY9182572.1"
                     /translation="MQRTLITIGIAVLVAGLLWPWLSKLGLGRLPGDFRIQTGNSVFY
                     FPLATCLVVSLVLSLILWLLRR"
     gene            complement(1498..2319)
                     /gene="trxA"
                     /locus_tag="VIQ99_05200"
     CDS             complement(1498..2319)
                     /gene="trxA"
                     /locus_tag="VIQ99_05200"
                     /inference="COORDINATES: protein motif:HMM:NF012314.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY9182573.1"
                     /translation="MRSLPNPRAAGQGTNRGVAQRCSTMRHMDVTTNTFEREVVEASK
                     TVPVVVDFWAPWCGPCRALGPTLDRVAESFGGRVKLVKINSDDNPELSQAFNIRSIPN
                     VIAFKDGRAVAQFMGAIPEAQVRQFFGQLVPSPGEETLRAAETAYAAGRIDEAAELLA
                     KVSADVAIAERVATLEQGIAFARAGSDGPGEAELRASLGIDPLDHDLRIKLASVLARQ
                     RRFREAMEELLEVVRLGHRDQSDEARVQLLSLFTLAASDAALVAEYRRKLANALH"
     gene            2374..>3442
                     /locus_tag="VIQ99_05205"
     CDS             2374..>3442
                     /locus_tag="VIQ99_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182574.1"
                     /translation="MLAVAVLVGLAVVAFDDAPRGTPRSAQAERQAPLPGYAPTAPPT
                     GAVLRYDTEYPTIPYATGRRTDAVAGMIERIERGEAKLDYHPVRGYLDSLLAALDIDP
                     SSQMLVFSQTSLQSRLIEPRTPRAIYFNDDVYVAFVQHAPIEIASLDPNLGPVFYLLE
                     QDGNQAPRFDAQLNRCLSCHDSYSLTGGGVPRFIVGSGYTGTTGMLVSHEGWILITDR
                     TPLKSRWGGWYVTGKHGEQVHLGNMIIKTLYDFDRLEELRKGNLETVDGLFDVRPYLT
                     NKSDIVALLVFQHQADVQNLITRLRYDALTPSQDQAALVDETTERLLRTMLFVDAVEY
                     TAPISGEPRFVEQFARRAARDG"
BASE COUNT          557 a         1136 c         1187 g          562 t
ORIGIN      
        1 aacgacatgt cgatgccaac ctggagcggc gcctgacgtt cgatcgggtg cgcggcagcg
       61 attcgccgct gttgcagttg tcgacgcggg agttcgagat attttgtctg ctcgcggagg
      121 gcgtgagctc ggcggacatc gcgaagcgct tgtcgctgag cccgaagacg gtcgcgaact
      181 acagcactca gttgaagggc aagctgaacg tcgggagcgc cgccgagttc gcgcgcctcg
      241 cgattcggca tgggatcatg cggccatgag cgagcaccta ccgtcgctgc cgagcacgat
      301 gctcgccatg cgattgcacg gaccgcgcgc cggcttgtcg cgagacgaga ttccgactcc
      361 ggagccagaa acggatcaag tcctgatcga ggtgggcgcc tgcggcgtgt gccgcacgga
      421 cctgcacgtt ctcgacggcg agctcccgaa cgcgcgctat cccgtgacgc cggggcacga
      481 gatcgtgggt cgagttgcgc gcgtcggtgc gggcgtcacg cgatggcgag tcggcgatcg
      541 cgtcggcgtg ccgtggctcg cgcatacgtg cggtgcgtgt gcgtactgcg agcgcggcct
      601 cgagaatctg tgcgaccaag cgacgttcac gggttacacg gcgccggggg gctatgcgca
      661 atacgttacc gccgacgccc gctattgctt ggccgtgccc gcgcgctact cggacgtcgc
      721 tgcggcgccg ctgttgtgcg caggcctgat cgggttccgc gcctaccgag cggccggtga
      781 cgcgcggcgc ctcggcctct atggcttcgg cgcggccgcg catctgctca cgcaggtcgc
      841 gtgcgccgaa gggcgcgagg tctacgcgtt cacgagaccg aaagactctg cggggcaaac
      901 gttcgcgcgg agacagggcg ccagctgggt cggaggctcc gacgaggggc cgcccgcgcc
      961 gctcgacgcc gcgatcattt ttgcgccggt cggcgcgctc gtgccggccg cgctgtcggc
     1021 cgtccgcaaa ggcggacgcg tcgtgtgtgc cggtatccac atgagcgacg tcccgtcgtt
     1081 tccctaccgt ctgctctggg gagagcgctc gctcgtgtcc gtcgcgaacc tgacgcgcga
     1141 cgacggcgag cggttcatgc gggtggccgc ggccgtcgac ctcacgccgt ccgtcgaagc
     1201 gctgccgttg accgaagcga acgaggcact cacacgcctc agagccggac gggtcgaggg
     1261 tgccgccgtc ctagtcccag agcggcgaac gagctagcgc cgcagcaacc acagaatgag
     1321 cgacagcacc agcgacacga ccaagcaggt cgcgagcggg aaatagaaca cgctgttgcc
     1381 ggtctggatt cggaagtcgc cgggcagacg gccgagccca agcttcgaca gccatggcca
     1441 caacaacccg gcaacgagca cggcgattcc gatggtaatc aacgtccgct gcatgcgtca
     1501 gtgcagcgcg ttcgcgagct tgcgccgata ctcggcgacc aatgccgcat ccgacgccgc
     1561 gagcgtgaac aacgagagca gctgaacgcg cgcctcgtcg ctttggtcgc ggtgacccag
     1621 gcgcacgacc tcgagcagct cctccatcgc ctcgcgaaag cgacgctgtc tggccagcac
     1681 gctcgcgagc ttgatccgca ggtcgtggtc gagcggatcg atgccgaggc tcgcgcgcag
     1741 ctcggcctcg ccggggccgt cgctgccggc cctggcgaac gcgatccctt gctcgagcgt
     1801 cgcgacgcgt tccgcaatcg cgacgtcggc agataccttc gcgagcagct cggccgcttc
     1861 gtcgatccta ccggcggcgt acgccgtctc ggctgcgcgc agcgtctcct cgcccggcga
     1921 cgggaccagc tggccgaaaa attggcgcac ctgggcttcg gggatcgcgc ccatgaactg
     1981 tgcgacggcg cggccgtcct tgaacgcgat cacgttcggg atcgagcgga tgttgaacgc
     2041 ctgtgacagc tcggggttgt cgtcggagtt gatcttgacg agcttgacgc ggccgccgaa
     2101 cgactcggcg accctgtcga gcgtgggccc cagcgcgcgg cacgggccgc accagggcgc
     2161 ccagaaatcg acgacgaccg gcacggtctt ggaggcttcg acgacctcgc gttcgaacgt
     2221 attcgttgtg acgtccatgt gccgcattgt actgcagcgc tgcgcgacac cgcggttcgt
     2281 gccttggccg gcggcgcgcg gatttggcaa gctacgcaca tggggaatcc cgacagtcat
     2341 ctaggttccg tcccgcgctc agcggcgttc ggtgtgctcg cggtcgcagt gctggtgggg
     2401 ctcgccgtcg tcgcgttcga cgacgcccca cgcggcacgc cgcggtccgc gcaagcggag
     2461 cgccaagcgc cactgcccgg gtatgcgccg acggcgcctc cgacgggcgc ggtgctgcgc
     2521 tacgacaccg agtatccgac gattccgtat gcgacgggcc gccgcacgga cgcggtcgcg
     2581 gggatgatcg agcgcatcga gcgaggcgag gcgaagctcg actatcatcc ggtgcgcggc
     2641 tatctcgatt cgctgctcgc cgcgctcgac atcgatccgt cgtcgcagat gctcgtgttc
     2701 tcgcaaacga gcctccagag ccggctcatc gagccgcgca caccgcgtgc gatctatttc
     2761 aacgacgacg tttacgttgc attcgtgcag cacgctccga tcgagatcgc gtcgctcgac
     2821 ccgaacttag gacccgtgtt ctatctgctc gagcaggacg gaaaccaggc gccgaggttc
     2881 gacgcgcagc tgaaccgctg cctgagctgt cacgattcgt attcgctgac cggcggaggc
     2941 gtaccgcggt tcatcgtcgg ctcgggctat acgggaacga cgggcatgct cgtatctcac
     3001 gagggctgga tcctgatcac cgaccgcacg ccgctgaaga gccggtgggg tggttggtat
     3061 gtgacgggga agcacggcga gcaagtgcat ctcggcaaca tgatcatcaa gacgctgtac
     3121 gacttcgatc ggctcgagga gctgcgcaag ggcaacctcg agacggtcga cggtttgttc
     3181 gacgtccgac cgtacctgac gaacaagagc gacatcgtcg cgctgctcgt gttccagcat
     3241 caggcggacg tgcagaacct gatcacgcgg ctgcgctacg acgcgctgac gccgtcgcaa
     3301 gatcaagctg ccctggtcga cgagacgacg gagcgcctgc tgcggacgat gctgttcgtc
     3361 gacgcggtcg agtacacggc gccgatctcg ggcgagccga ggttcgtcga gcagttcgcg
     3421 cgccgcgcgg cgcgcgacgg cc
//
LOCUS       DATCUD010000350         4194 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53153, whole genome shotgun sequence.
ACCESSION   DATCUD010000350 DATCUD010000000
VERSION     DATCUD010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4194
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53153"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1542
                     /gene="lepA"
                     /locus_tag="VIQ99_05210"
     CDS             <1..1542
                     /gene="lepA"
                     /locus_tag="VIQ99_05210"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013820341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY9182575.1"
                     /translation="SYEVSRSLAACDGALLVVDAGQGVEAQSVANCYTAIEQGLEVLP
                     VINKIDLPTADPERVIAQIEDIIGIEAKDAVRISAKTGFGVDELLERIVERLPAPKGS
                     VDAPLQALIIDSWFDSYAGVVSLVRVMNGVIRKGARILVHSTQRKYEVERLGVFTPRV
                     AVRDELKAGEVGFLIAAIREINAAPVGDTIVDANVPNVPALPGFAKIQPRVFAGMFPV
                     DSDEYGNFREALEKLALNDSALAFEPEVSAALGFGMRCGFLGLLHMEIVQERLEREFN
                     LSLITTAPTVVYEVVKSDGEVIKVENPADLPEQSKIAEIREPIIHASIFVPQEYLGAV
                     IQLCIEKRGVQKRLHYSGKQVQLEFELPLAEVVLDFFDRLKSVSRGYASFDYHFVRFE
                     AAPLVKLDILVNKEKVDAMAFIAHRDGVERKGRRIVEILKDVIPRQQFEVAVQAAIGS
                     QIIARTTVKAYRKDVTAKLYGGDVTRKRKLLEKQKAGKKRMKQVGSVEIPQEAFLAVL
                     QVDKK"
     gene            1570..2355
                     /gene="lepB"
                     /locus_tag="VIQ99_05215"
     CDS             1570..2355
                     /gene="lepB"
                     /locus_tag="VIQ99_05215"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007145689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEY9182576.1"
                     /translation="MDFALILVVLTAVSGVIWALDAAFLARARVTAAAGGKEVKEPVV
                     VEYAKSFFPVLLLVLVIRSFLFEPFRIPSGSMEPTLLTGDFIFVNKFAYGLRLPVLNT
                     KIVEIGEPERGDVIVFRLPTDPSVNYVKRVVGLPGDVVEYDPGNKQIAINGEAVPIEL
                     VGPYDGSSDIVVGREQLGKHNHRVLLTRGARPSPGGAYEVPAGHYFVMGDHRDNSQDG
                     RYREEVGFVPEGNVVGRATGVWMNWRWPTQGGPQWNRIGEGIE"
     gene            2352..2726
                     /locus_tag="VIQ99_05220"
     CDS             2352..2726
                     /locus_tag="VIQ99_05220"
                     /inference="COORDINATES: protein motif:HMM:NF027463.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4845 domain-containing protein"
                     /protein_id="HEY9182577.1"
                     /translation="MTASTRHSQTGMTALGFLIIAALVGIVGLAALKVTPMYIKNMRM
                     STIMADIENDLSGQSATPVTIRQELARRFSVEDINLDLDSLKITQSKNGFTLRVAYEE
                     RAPYVADIYLLVAFDKQVEIRR"
     gene            2723..3415
                     /gene="rnc"
                     /locus_tag="VIQ99_05225"
     CDS             2723..3415
                     /gene="rnc"
                     /locus_tag="VIQ99_05225"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012824256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEY9182578.1"
                     /translation="MTARARWAEAQLRYAFKDSSLLDLALTHRSASKSNNERLEYLGD
                     SFLNFAIARRLFDLRRDDTEGDLSRARAALVKEPTLAAIGQRLGIDAQLSLGPGEIRS
                     GGAQRAAILADAVEALIGAVLLDGGPAAAEAVIDLLFAAEFESLPDAATLKDPKTRLQ
                     EWLQGRGLPLPSYAVKHVQGRDHEQTFVVECEVAEKNAQTTGRGQSRRRAEQDAAEAM
                     LAVLTGERGTDT"
     gene            3393..>4194
                     /gene="era"
                     /locus_tag="VIQ99_05230"
     CDS             3393..>4194
                     /gene="era"
                     /locus_tag="VIQ99_05230"
                     /inference="COORDINATES: protein motif:HMM:NF000908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEY9182579.1"
                     /translation="MSEAQIPEGRCGFVAIVGRPNVGKSTLLNALVGEKLSIVTDKPH
                     TTRQRVLGVLNRGADQAVFIDTPGHARRTKRALHRLMARQIHQAVEDCDIALLVVEAD
                     KLTSQDRTLIEMLAGKLERTFLVLNKIDTLTAKTTLLPTLDKLAKQPFAGFVPISAAT
                     GENLDRLVALIFERLPLGPPLFPRGMITDRDLTFRIAEIIREKLMTLVHKEVPYGLTV
                     EVEHLGTNEQGQRLVHALIWVERESHKSIVIGKAGSVLKEAGTLAREEL"
BASE COUNT          804 a         1237 c         1399 g          754 t
ORIGIN      
        1 tcctacgaag tttcgcgctc gctcgcggcg tgcgacgggg cgttgctggt cgtcgacgcg
       61 gggcagggcg tcgaggcgca gagcgtcgcg aactgctata cggccatcga gcaggggctc
      121 gaggtccttc cggtcatcaa caagatcgat ttgccgacag cggatcccga gcgtgtcatc
      181 gcgcagatcg aggacatcat cggcatcgaa gccaaggacg cagtccgcat cagcgccaag
      241 accggcttcg gcgtggacga gctgctcgag cgaatcgtcg agcgcctacc cgctccgaag
      301 ggtagcgtcg atgcgccgtt gcaggcgctg atcatcgatt cgtggttcga cagttacgcc
      361 ggtgtcgtgt ccctcgtgcg cgtcatgaat ggcgtcattc gaaaaggcgc acgaatcctg
      421 gttcactcca cgcagcgcaa gtacgaagtc gagcggctcg gagtgttcac gccgcgcgtc
      481 gcggtccgcg acgagctcaa ggccggcgaa gtgggtttct tgattgcggc gatccgcgag
      541 atcaacgctg cacccgtcgg cgatacgatc gtcgacgcca atgtgcccaa cgtgcccgcg
      601 ttgcctggct tcgcgaagat tcaaccgcgc gtgttcgccg gcatgtttcc cgtcgactcg
      661 gacgagtacg gcaacttccg cgaagccttg gagaagctcg cgctcaacga ttcggctctg
      721 gcgttcgagc ccgaggtcag cgcggccttg ggcttcggca tgcgctgcgg ttttctcggg
      781 ctcctacaca tggaaatcgt gcaagagcgg ctcgagcgcg agttcaatct gtccctgatc
      841 acgactgcgc cgacggtcgt ctacgaagtc gtgaaatcgg acggcgaggt catcaaggtc
      901 gagaatccgg cagacctgcc tgagcagagc aagattgcgg agattcgcga accgatcatt
      961 catgcgagca tcttcgtgcc gcaggagtac ctgggcgccg tgatccagct ctgcatcgag
     1021 aagcgcggcg tgcaaaaacg cttgcattac tcgggcaagc aggtgcaact cgagttcgag
     1081 ctgccgctcg ccgaggtcgt cctcgacttc ttcgatcggc tgaaatcggt gagccgcggc
     1141 tacgcgtcgt tcgactacca tttcgtgcga ttcgaagccg cgccgctcgt gaagctcgac
     1201 atcctcgtga acaaggagaa ggtcgacgcg atggcgttca tcgcgcatcg cgacggcgtc
     1261 gagcgcaagg ggcgtaggat cgtcgagatt ctgaaggacg tgattcctcg ccagcaattc
     1321 gaggtggcgg tgcaggccgc gatcggctcc cagatcatcg cgcggaccac cgtgaaggcg
     1381 tatcgcaagg acgtcacggc aaagctgtat ggcggcgacg tgaccagaaa gcgcaaactg
     1441 ctcgagaagc aaaaggccgg caagaagcgc atgaagcaag tcggctccgt cgagatcccg
     1501 caggaggcgt ttctcgccgt attgcaggtc gacaagaagt gatgcaacac ccaagcgaag
     1561 gtgcctgacg tggatttcgc attgatactc gtggtgctga cggcggtgtc cggtgtgatc
     1621 tgggcgctcg atgcggcgtt cctggcccgc gcgcgcgtga cggcggcggc cggcggcaag
     1681 gaggtcaaag agccggtcgt cgtcgagtac gcgaagtcgt tcttcccggt cttgctgctc
     1741 gttttggtga ttcggtcatt cctgttcgag ccgtttcgga tcccatcagg ctcgatggag
     1801 ccgacgctgc tgacgggcga tttcattttt gtgaacaagt tcgcgtatgg cttacgccta
     1861 ccggttctaa ataccaagat cgtcgagatc ggcgagcccg agcgcggcga tgtgatcgtg
     1921 ttcaggttgc cgaccgatcc gagcgtgaac tacgtcaagc gcgtggtcgg gttgcccggg
     1981 gacgtcgtgg agtacgaccc cggcaacaag cagattgcga tcaacggcga ggcggtgcct
     2041 atcgagctcg tcgggccgta tgatggaagc tccgacatcg tggtgggtcg ggagcaactg
     2101 ggcaagcaca atcaccgcgt gctgttgacg cgcggcgcgc ggcccagccc gggcggcgcg
     2161 tacgaggtgc cggcagggca ttatttcgtg atgggcgatc atcgggacaa cagtcaggat
     2221 ggtcgttacc gggaagaggt cgggttcgtt ccggaaggca acgtggtcgg gcgtgccacc
     2281 ggcgtgtgga tgaactggcg gtggccgact caaggaggac cgcaatggaa tcgtatcggc
     2341 gagggcatcg aatgacagca tcgacgcggc attcgcagac gggcatgacg gcgctgggct
     2401 tcctgatcat cgcggcgctg gtcggtatcg tcggcctcgc ggcgctgaaa gtgacgccga
     2461 tgtacatcaa gaacatgcgg atgtcgacga tcatggcgga catcgagaac gacctgagcg
     2521 gccaaagcgc gacgccggtc acgatccgcc aagagttggc cagacgtttt tccgttgaag
     2581 acatcaacct cgacctggac tctttgaaga ttacccagag caagaacggt ttcacgctgc
     2641 gcgtcgccta cgaagagcgc gccccgtacg tcgccgacat ctacttgctc gtggccttcg
     2701 acaagcaggt cgagattcgg cggtgaccgc ccgcgcccgt tgggccgagg cgcagctccg
     2761 ttacgcgttc aaggattcgt ccctgctcga tctcgcgctg acgcatcgca gcgcatccaa
     2821 gtccaacaac gagcgtctcg agtatctcgg cgactcgttc ctgaatttcg cgatcgcacg
     2881 tcgcctgttc gatttgcggc gcgacgacac cgaaggagat ctgagccgtg cgcgggcggc
     2941 gctcgtcaag gagccgactc tcgcggcgat cggtcagcgg ctcggcatcg atgcgcagct
     3001 gagcttggga ccgggcgaga ttcgctcggg cggggcgcag cgcgcggcga tcttggcgga
     3061 cgccgtggag gccttgatcg gcgcggtctt gcttgacggc ggaccggccg cagcggaagc
     3121 tgtcatcgac ctcctgtttg ccgcagagtt cgagagcttg cccgacgcgg cgacgctgaa
     3181 ggatccgaaa acccggctgc aagagtggct gcaaggcagg gggttgccat tgccgtcgta
     3241 cgccgtgaag cacgtgcagg ggcgcgatca cgaacagacc tttgtcgtcg aatgcgaagt
     3301 ggcagagaag aatgcgcaga ctaccggtcg aggacagagc cgccgacgag cggagcaaga
     3361 cgccgcggaa gcgatgctgg cggtgctgac cggtgagcga ggcacagata cctgagggcc
     3421 gctgcggctt cgtcgctatc gtcggccgcc ccaacgtcgg caaatccaca ctgctgaatg
     3481 ccctcgtcgg cgagaagctc agcatcgtga ccgataaacc gcacacgacg cgccaacgcg
     3541 tgctcggcgt gctgaaccgc ggcgccgatc aagccgtgtt catcgacact ccgggtcacg
     3601 cgagacgcac gaagcgcgcg ctgcatcggc tcatggcgcg gcagatccat caggccgtcg
     3661 aggactgcga catcgcgttg ttggtcgtcg aggccgacaa gctcacgtcg caggaccgca
     3721 cgctgatcga gatgctcgcg ggtaagctcg agcgcacgtt cctcgtgctg aacaagatcg
     3781 atacgctcac cgcgaagacg acgttgttgc cgacgctcga caagctcgcg aagcaaccgt
     3841 tcgccgggtt cgtcccgata tccgccgcaa ccggagaaaa cctcgatcgt ttggtcgcgc
     3901 tgatcttcga gcgcttgccg ttaggacccc cgctgtttcc gcgaggaatg atcacggacc
     3961 gcgatctgac gtttcgcatc gcggagatca ttcgcgagaa gctgatgacg ctcgtccaca
     4021 aagaggtgcc gtatggcctg accgtcgagg tcgagcactt gggcacgaac gagcaggggc
     4081 agcggctcgt gcacgcgttg atctgggtcg aacgcgaaag tcacaagagc atcgtgatcg
     4141 gcaaggccgg tagcgtgctg aaagaagccg gaacgctcgc gcgcgaggag ctgc
//
LOCUS       DATCUD010000351         2223 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_74574, whole genome shotgun sequence.
ACCESSION   DATCUD010000351 DATCUD010000000
VERSION     DATCUD010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74574"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..642
                     /locus_tag="VIQ99_05235"
     CDS             <1..642
                     /locus_tag="VIQ99_05235"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182580.1"
                     /translation="ATLVLPDAFAQAGSCVVTPDAGEGPFYFDASLVRSDVTSGRPGA
                     PLDVAVQITRSRDCAPLAGVRFDLWQADALGLYSGYRDQPGVGGVDAASTVGATFLRG
                     TQLADRDGWVRFKTVYPSWYGGRTPHLHFKVFVDSKEVIATQIFFDDEVNAEIFNNWD
                     PYREHVRKRTSFNNNDTFLDRDKDGRTDGLFCEVEKYDRGAGVTAKAVVTVDV"
     gene            963..1997
                     /locus_tag="VIQ99_05240"
     CDS             963..1997
                     /locus_tag="VIQ99_05240"
                     /inference="COORDINATES: protein motif:HMM:NF024627.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="right-handed parallel beta-helix
                     repeat-containing protein"
                     /protein_id="HEY9182581.1"
                     /translation="MRIALAFVLALVATVAGAQTRVVHVANFGVDSPDCGLQETPCRS
                     ISQAIRNASEGDTVFVGPGLYGDLNHNGVVGELGEEGASIPSGESCLVCVSKRLTLLS
                     QRGAAHTTIDAHNLPLTAVTLSRIFPAPESSSVFGYLEQGFTVLAGEREGISMPDGGI
                     VWGNRIIGGTIGIQGAFQHQTTRPEIFDNEVTEAVERGIAIYSGLISGNVVARNGAGI
                     SAFRNMDIASNTIADNRGYGVSIGDPYSPHVRIIHNVFIRNAGPGVLLNDGDPNYFDF
                     STGELWNDVAVFGNDFIGNDPQRHCGIENHISTVWATNNFWAAAPDFGVTQQIVCGRA
                     HTEPSRTQPH"
BASE COUNT          413 a          681 c          694 g          435 t
ORIGIN      
        1 gcgacactcg tgctgcccga tgcattcgcg caggccggaa gctgcgtcgt cacgccggat
       61 gccggcgagg gcccgttcta cttcgatgcg agcctcgtgc gctccgacgt cacgagcggg
      121 cgcccgggcg cgccgctcga cgtcgccgtg cagatcacgc gctcgcgcga ctgcgcgccg
      181 ctcgccggcg tgcgcttcga tctctggcag gccgatgcgc tgggtctcta ctccggctat
      241 cgcgaccagc ccggcgtcgg cggcgtcgac gccgcatcga cggtcggtgc cacgttcctg
      301 cgcggcacgc agctcgccga cagggatggc tgggtccgct tcaagaccgt gtacccgagc
      361 tggtacgggg gccgcacgcc gcacctgcac ttcaaggtgt tcgtcgattc gaaggaggtc
      421 atcgcgacgc agatcttctt cgacgacgag gtcaacgccg agatcttcaa caactgggat
      481 ccgtatcgcg agcacgtgcg caagcgaaca tcgttcaaca acaacgatac gtttctcgac
      541 cgtgacaagg acggccgcac cgacggcttg ttctgcgagg tcgagaagta cgatcgcggc
      601 gccggcgtca ccgcgaaagc tgtcgtcacc gtcgacgtct agcgtccttg ttcggcgcat
      661 aggcgctgcc cccgcgcgac atagccgccg ggttatccga catcggaatc gatactcaga
      721 taccagacgg atcgttcatc acgattccgt tacgcggcgc tcgagttgct ccggtcggct
      781 gcgccgcgac gggcgggagc ttgccgagct ggacattcat cgccattcgt tctttcgttg
      841 cgggcatagt gctaggtgtc ggtttttacg agtatggggc caacgtatcg cggcgtatgc
      901 tccgcggcct ggagatcgct tgggtctctc cgtgtcgggc ggcttgagct agggaggtcg
      961 tcatgcgtat agcgttagcg ttcgtgctgg cactcgtcgc caccgtcgca ggcgctcaaa
     1021 cgcgcgtggt ccacgtcgcg aatttcggcg tggattctcc agactgcggc ttgcaagaaa
     1081 caccgtgccg ttcgatcagc caggcgatac gtaacgccag cgaaggcgac acggtttttg
     1141 taggtcccgg cctctacggc gatctcaatc acaatggtgt cgttggcgag ctcggcgagg
     1201 aaggagccag cataccgtcg ggcgaaagct gcctcgtctg cgtgtcgaag agactcacgc
     1261 tgttatctca gcgtggtgcg gcgcatacga cgatcgacgc gcataatttg ccgctcacgg
     1321 ccgtcaccct tagccgcatc ttcccagcac cggagagttc ttcagtcttt ggctatttgg
     1381 agcaaggatt cacggtactg gcgggcgaac gcgaaggtat tagcatgccg gacggaggca
     1441 tcgtgtgggg taatcgcatc atcggcggaa cgataggcat ccaaggcgcg ttccagcacc
     1501 aaaccacccg acctgagatc ttcgacaacg aagtcactga ggccgtggag cgcggcatag
     1561 cgatttatag cggcctaatt tccggtaatg tcgtcgcgcg caacggcgcg ggcatcagcg
     1621 cgtttcgtaa catggacatc gcgagcaata cgattgccga caatcgcggc tacggcgtct
     1681 ccatcggcga tccatattcg ccgcacgtga ggatcattca taacgtcttc attcgcaacg
     1741 caggtcccgg tgtcttgctc aacgacgggg atccaaacta ttttgatttt tcgaccggcg
     1801 agttgtggaa cgacgttgct gtcttcggca acgacttcat cggaaacgac ccgcaacgcc
     1861 actgcggcat cgagaaccac ataagcacgg tctgggcgac caacaacttc tgggccgccg
     1921 ctcccgattt cggcgtcacg cagcagatcg tgtgcggcag agcccacact gagccgtcga
     1981 gaacccagcc gcactaacga gtcgcatgat agaacgagca gcagcgcgct cacgagaccg
     2041 ccgaaagcga tgccggcctt ccgtttcgat gtaggcaatc agcgatgcac gttgcgcctg
     2101 cttggctatt gggatcgcga cggcagatcg atcagcacga tgtcggagtt ctgcggcaag
     2161 cggtcgaaga cgatctgttt gccgtcgggc gtgacgtcga aggtgcgcat cgggtccgga
     2221 ttg
//
LOCUS       DATCUD010000352         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88703, whole genome shotgun sequence.
ACCESSION   DATCUD010000352 DATCUD010000000
VERSION     DATCUD010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88703"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(185..1285)
                     /gene="bioB"
                     /locus_tag="VIQ99_05245"
     CDS             complement(185..1285)
                     /gene="bioB"
                     /locus_tag="VIQ99_05245"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010629130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEY9182582.1"
                     /translation="MSALEKETAREVRITPEPRTDWTRAEVEALFELPFNDLLYRAQC
                     VHRQNFDPNAVQVSTLLSIKTGACPEDCAYCPQSIRFETGVDRHDLMSLEEVRAAARR
                     AKEAGATRFCMGASYRGPKDSQLEPILAMVKEVKALGLETCATLGLLRPGQAESLAAA
                     GLDYYNHNLDSSAEFYGKIITTRTYTDRLETLERVRAAGVKVCCGGIVGMGETRADRI
                     GLLQTLATLSPQPESVPINELVPIPGTPLATAGPLDPFEFVRCIAVARILMPRSHVRL
                     SAGRSDFTDELQALCFFAGANSIFYGEKLLTTDNPDAAADQRLFERLGLVPEPARAGM
                     PAVEQRRDAGMDARGRATQGAVAEQLPSVTAP"
     gene            1372..>1695
                     /locus_tag="VIQ99_05250"
     CDS             1372..>1695
                     /locus_tag="VIQ99_05250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182583.1"
                     /translation="MVYGFCKTLFVESCPGCGESSESGFCAVCAAELTRIANPCRRCG
                     LAEPVARCPRRHTPWHVDAVHAPYAYAPPLDHYLHAFKYRGARAMGRAFAALIAPALR
                     APSVAV"
BASE COUNT          250 a          587 c          564 g          294 t
ORIGIN      
        1 aatcgagcac gagcctcggc tcggcccgca gaagcgcgag gcgctccagc attcttccgc
       61 gtgcctcgtc gtggatgaag ctcgcggcct cgaagccgcg cgcacgatcg aacgcgcgcc
      121 gagctgcgcg tttctccggc agcgcatcct cgagacgtag ggtcacggcc gcggtacgac
      181 cgcgctaggg cgcggtcacg ctcggcaact gctcggcaac tgctccctgc gttgctctac
      241 cgcgcgcatc catgcccgcg tccctgcgtt gctctaccgc gggcatccct gcccgcgccg
      301 gttccggcac gagccccaac cgctcgaaca gacgttgatc cgccgcggcg tcgggattat
      361 ccgtcgtcag cagcttctcg ccgtagaaga tcgagttcgc gccggcgaag aagcacagcg
      421 cttgcagctc gtcggtgaag tcgctgcgcc cggccgacaa ccgcacgtgc gagcgcggca
      481 tcaggatccg tgcgacggcg atgcaccgga cgaactcgaa ggggtccagc gggccggccg
      541 tcgcgagcgg cgtgcccggt atcggcacga gctcgttgat cggcacgctc tcgggttgcg
      601 gcgacagcgt cgcgagcgtc tggagcagac cgatccggtc cgcgcgggtt tcgcccatcc
      661 cgacgatgcc gccgcagcag accttgacgc cggccgcccg cacgcgctcg agcgtctcga
      721 ggcgatcggt gtacgtgcgc gtcgtgatga tcttgccgta gaactcggcc gaggaatcga
      781 gattgtggtt gtagtagtcg aggccggccg cggcgagact ctcggcctgg ccgggccgaa
      841 gcaggccgag cgtcgcgcac gtctcgaggc cgagcgcttt cacttccttg accatcgcga
      901 ggatcggctc gagctgtgag tccttgggcc cgcggtacga ggcgcccatg cagaagcgcg
      961 tcgctccggc ttccttagcg cgccgcgccg cggctctgac ttcctcgagc gacatgaggt
     1021 cgtgtcggtc gacaccggtc tcgaaccgga tgctctgcgg gcagtaagcg caatcctcgg
     1081 ggcacgcgcc cgtcttgatc gacagaagcg tggagacctg caccgcgttc gggtcgaagt
     1141 tctgccggtg cacgcactgc gcgcgataca gcaggtcgtt gaaaggcaat tcgaatagcg
     1201 cttcgacctc ggctctagtc caatcggtgc ggggctcggg cgtgatgcgc acctcgcgcg
     1261 ccgtttcttt ctcgagtgca gacattcgcc gatcgctccc cgcgccttga tggcgtcacg
     1321 attcggtatc agaaacgcgc gcgtgcgtgc tgtcaacctt cgagaagctc agtggtttac
     1381 ggtttctgca agacgttgtt cgtcgaaagc tgccccggct gcggcgagtc ctcggagtcc
     1441 gggttctgcg ccgtatgcgc cgccgagctt acgcgtatcg cgaacccgtg ccgtcgctgc
     1501 gggctcgcgg aaccggtggc acggtgcccg cgccggcaca cgccttggca cgtcgacgcc
     1561 gtgcacgcgc cgtacgctta tgcgccgccg ctcgatcact acctgcacgc gttcaagtac
     1621 cgcggcgcac gcgccatggg gcgcgcattc gcggccctga tcgctcccgc tctaagagcg
     1681 ccgagcgtcg ccgtc
//
LOCUS       DATCUD010000353         2386 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3675, whole genome shotgun sequence.
ACCESSION   DATCUD010000353 DATCUD010000000
VERSION     DATCUD010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2386
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3675"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..800
                     /locus_tag="VIQ99_05255"
     CDS             <1..800
                     /locus_tag="VIQ99_05255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182584.1"
                     /translation="KLIAADTGMLVDYYNGRASALVLDGGDAEARYFAPPQNARLETD
                     GSVDAFGRTEQELRAALEQGTIAAIERGEGTAPWRVRLMHEGATMSAIFYPHGAGGAD
                     LELAADALDGLLGTTLVAPTVARAIDGENGALQLRYPDAVSEAERLSRGLRFSGWCPI
                     EPQTRLMFTFDVLIFNRGRTPENIVFANDLTDLTLTDHRQAFGTERALPASFDPGTLA
                     IPPELAAALRALDEPRLTAALGAWVDSRRIRALLERRDRLLASRGPP"
     gene            797..1552
                     /locus_tag="VIQ99_05260"
     CDS             797..1552
                     /locus_tag="VIQ99_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182585.1"
                     /translation="MTIARLVSTAILAALLVAPAWAQPLPEFASSTGEVPVEGWRGFM
                     DWVFMLDSLLLLTLASGLGLVIGFHPTTERAADTLEEIEAPKVYVLYAVVGAIIGLMV
                     LKYGMVIGFVVFGIGGLIRFRTDLRSATVTGQVILVTLIGLSCGLHLPHVAVLTTAFV
                     FALMYLIHSRPAYRIEIQGLPSERLNEAAAAYRDQIVKHGCNVLSEKKNPAKERVVFI
                     VRGARNLTHERLEELFATNIDPALRGSVDWEID"
     gene            complement(1565..1873)
                     /locus_tag="VIQ99_05265"
     CDS             complement(1565..1873)
                     /locus_tag="VIQ99_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010812824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1272 domain-containing protein"
                     /protein_id="HEY9182586.1"
                     /translation="MLELRPICENCAKHLPPHSTEARICSYECTFCATCVETVLGNVC
                     PNCGGGFAPRPIRPSRNLRGDNYLGKDPASTTLKHRPVDAAAHARFAATIAGIPPEER
                     "
     gene            complement(1880..>2386)
                     /locus_tag="VIQ99_05270"
     CDS             complement(1880..>2386)
                     /locus_tag="VIQ99_05270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182587.1"
                     /translation="KLLGRLAAYEPNDALSLRRHAEILVHSADLSLLRAHDAGRYGGI
                     EPAVAQYEQALEELERAGAGAAAIEATFSPQTPIVLPALEANPLLSGDGPIAAGSHID
                     VAFEITESGKAAGVRIVAATDDVTRAAQKSLVRLIETSTFRPRAIDGRIVDSAPVSLR
                     YYPQQPRE"
BASE COUNT          355 a          786 c          818 g          427 t
ORIGIN      
        1 ccaagctgat agctgcggac accggcatgc tcgtcgatta ctacaacgga cgcgcctcgg
       61 ccctcgtgct cgacggcggt gacgccgaag cgcgctactt cgcgccgccg cagaacgcga
      121 ggctcgagac cgacggcagc gtcgacgcat tcggccgcac ggagcaagag ctgcgcgcgg
      181 cactcgagca aggcacgatc gccgcgatcg agcgcggcga agggacggcg ccgtggcgtg
      241 tgcgcctgat gcacgagggc gccacgatgt cggcgatctt ttatccgcac ggcgctggcg
      301 gtgccgacct cgagctcgcg gccgacgcgc tcgacgggct gctcggcacg acgctggtcg
      361 cgccgaccgt cgcgcgcgcg atcgatggcg agaacggcgc gttgcagctc cgctaccccg
      421 atgcggtcag cgaggccgaa cgcctgtcgc gtgggctccg cttcagcggc tggtgcccga
      481 tcgagccgca aactcgcctc atgttcacgt tcgacgtgtt gatcttcaac cgcggccgga
      541 cgcccgagaa catcgtgttc gcgaacgatc tcacggacct cacgctgacg gatcatcgcc
      601 aggcattcgg cacggagcgt gcgctgccgg ccagcttcga ccccggcacg ctcgcgattc
      661 cgcccgagct tgcggcggcg ctccgcgcgc tcgacgagcc gcgtcttacg gcagcgctcg
      721 gcgcttgggt ggattcgcgt cggatccgtg cgctgctcga gcgtcgggat aggttattgg
      781 cttcgagagg acccccatga ccatcgctcg cctcgtgtcg accgccatcc tggccgcctt
      841 gctcgtggcc ccagcttggg cgcagccgtt gccggagttc gcgtcgtcga ccggcgaggt
      901 gccggtcgaa ggctggcgcg gcttcatgga ttgggtattc atgctcgatt cgctgttgct
      961 gctgacgctc gcgtcggggc tcgggctcgt gatcggcttc cacccgacga ccgagcgtgc
     1021 ggcggacacc ttggaagaga tcgaggcccc gaaggtgtat gtgctgtacg cggtcgtcgg
     1081 cgcgatcatc gggctcatgg tgctcaagta cggcatggtc atcggtttcg tcgtgttcgg
     1141 catcggcggc ttgatccgtt tccgcacgga tttgcgctcg gcgaccgtca ccgggcaagt
     1201 catcctcgtc acgttgatcg ggctttcgtg cggcttgcac ttgccgcacg tggcggtgct
     1261 cacgacggcg ttcgtattcg cgttgatgta tctgatccac tctcgtccgg cgtaccgcat
     1321 cgagattcag ggtctgccgt cggagcggct gaacgaggcc gctgcggcct accgggacca
     1381 gatcgtgaag cacggctgca acgtgctcag cgagaagaag aacccggcca aggaacgcgt
     1441 ggtcttcatc gtgcgcggcg cgcgtaactt gacgcacgaa cgcctcgagg agctgttcgc
     1501 cacgaacatc gaccctgcgc tgcgcgggtc cgtcgattgg gagatcgact gactgcgatc
     1561 ggtgtcaacg ttcctcgggt ggtatcccgg cgatggtcgc ggcgaaccgc gcgtgggcgg
     1621 ccgcatcgac ggggcgatgc ttgagcgtcg tgctcgcggg gtccttgccg aggtaattgt
     1681 cgcccctgag attccgcgac ggccggatcg gccgcggcgc gaagccgccg ccgcagttcg
     1741 ggcagacgtt accgagcacg gtctcgacgc aagtcgcgca gaacgtgcac tcgtacgagc
     1801 agatccgcgc ctccgtcgaa tgcggcggca aatgtttcgc gcagttttcg caaatcggtc
     1861 ggagctcgag catgcgtggt cactctcgtg gctgctgcgg gtagtagcgc aagctgaccg
     1921 gtgccgaatc gacgatccgg ccgtcgatgg cccgggggcg gaaggtgctc gtttcgatca
     1981 agcgaaccag actcttctgc gcggcacgtg tcacgtcgtc cgtcgctgcg acgatccgca
     2041 cgccggcggc cttgccggat tccgtgattt cgaatgccac atcgatatga ctgccggcgg
     2101 cgatcggtcc gtcgccggag agcaacggat tcgcttcgag cgccgggagc acgatcgggg
     2161 tctgcggcga gaacgtcgcc tcgatcgcgg ccgcccccgc gcccgcccgc tcgagctcct
     2221 cgagcgcctg ctcgtactgc gcaacagctg gctcgattcc cccgtagcga cccgcatcgt
     2281 gcgcgcgtag gaggcttaag tcagccgagt ggacgaggat ctccgcgtgc cggcgcagcg
     2341 acaaggcatc gttcggttcg tacgccgcca ggcggccgag cagctt
//
LOCUS       DATCUD010000354         3201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53189, whole genome shotgun sequence.
ACCESSION   DATCUD010000354 DATCUD010000000
VERSION     DATCUD010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3201
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53189"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(347..1006)
                     /locus_tag="VIQ99_05275"
     CDS             complement(347..1006)
                     /locus_tag="VIQ99_05275"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9182588.1"
                     /translation="MKLRHLSVVATTLCLFVGAGVAGAQSLAGDLDAKSRARLPYVQR
                     KDTDESAKRLFDIFVRGSNSPTDELGGPLAFAAYNVPVANALLDLHDGAVGKGTLDAH
                     VRELAILVACRATNYDLEWNAHAPAALRAGVPQQAIDVVRSNGALTGLADADAAVIRF
                     GRELLNDRKMSSATFAKAKELYGAKGAMDLVAVMSTYAVSGFYAIAVDEHLPAGQPTL
                     R"
     gene            complement(1030..2139)
                     /locus_tag="VIQ99_05280"
     CDS             complement(1030..2139)
                     /locus_tag="VIQ99_05280"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9182589.1"
                     /translation="MNAAWLAAAVLAAVAAASGAAAQAPAQPLPIESIQLRGDRFRGL
                     HYREMTEEQRALLYNVVNSARAVTNTTGNGPFNALLRSPTVGEQSQQLGNAIRFSSGL
                     SGRLRELATLMAGRAWTSTYEWYAHERYARDEGIDAAVIAAIAAHEKPDLAAMPAEDA
                     MVWRVADELLYTRRITDATYREALDVLGERRLLSTVTIAAYYEYVSMLLNVDRYPLPA
                     DAPAEAAAAAHALVPLTPGEFRREPVGTVTPRPAILNEDTRKALEALHEALAQEASPP
                     AEARTTATSLVREIWSPSSARALRPPSDATSQDAATARRFANELLGTRFVSDQTFAAA
                     RDAFGERGLVNLMVLVGYSNIRCAQQALAGAHCVL"
     gene            complement(2136..>3201)
                     /locus_tag="VIQ99_05285"
     CDS             complement(2136..>3201)
                     /locus_tag="VIQ99_05285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182590.1"
                     /translation="AALESLASLAAPPGAAEIVRLRHEYLTRQLESLRARVAMLGGQH
                     LDFDAESEALYDAVAPTHTEEEFARVLDELARRLPGEGPVSGRYEAYRAEFVIPSERL
                     SAVFDAAIDACRARTLRHIELPADESFTLEYVTGKTWSGYNWYQGKHRSLIEINTDLP
                     IYIDRAVDLACHEGYPGHHVYNMLLEKSLYTDRGWVEFSVYALFSPQSLIAEGTANYG
                     IDVAFPEEERRAFEREVLFPAAGLDGSQANTYYEIAELVKQLSYAGNEAARRYRNGTI
                     DAAAAAKWHETYVLMTPERAAQRVRFIDQYGAYVINYNLGEDLVAAYVERQAGGDAQK
                     RWQVFAELLSSPRLPSGLGP"
BASE COUNT          530 a         1093 c         1044 g          534 t
ORIGIN      
        1 ggcgctgaaa aacttcgtca actaacgaac actgtcgacg agccggcctg gcgttcgcga
       61 cgagttcgcc aacgccaggc cggtgaatga tcgctcgcga catctcggct ctcgatcatc
      121 cgcgagcagc gagcttacgc tcacgctctc cgcgcgcgac ccgaccggcg tcgcgagccg
      181 ccctcctgac gatttttgcg gcgttgagcc cgtacgcacg gattcacgtg caagctcttg
      241 atcgaaatag attcgatctc ggctaccgtt caaacggcga caagaatccc gcgcaactca
      301 ttgatgagcg gggaatcacg gatgagccaa ccgagcgtcg tgcgggtcaa cgcaacgtcg
      361 gctggccggc cggcaggtgc tcgtcgaccg cgatcgcgta gaagccgctg accgcgtacg
      421 tgctcatgac cgccacgagg tccatcgcgc ccttcgcgcc gtagagctcc ttggccttcg
      481 cgaacgtggc cgagctcatc ttgcggtcgt tcaagagctc gcggccgaag cggatcacag
      541 ccgcgtcggc atcggccagt cccgtcaacg caccgttcga gcgcacgaca tcgatggcct
      601 gctgcggaac accggcccgc agcgctgcag gcgcgtgcgc gttccactcg aggtcgtagt
      661 tcgtggcacg gcaggccacg aggatcgcca gctcgcgcac gtgcgcatcg agcgtgccct
      721 ttcctactgc gccgtcgtgc aagtcgagca acgcgttcgc cacgggcacg ttgtatgccg
      781 cgaatgcgag cggaccgccg agctcgtcgg tcggcgaatt gctgccgcgg acgaagatgt
      841 cgaacagccg cttcgccgac tcgtccgtgt ccttgcgctg cacgtacggc agccgcgcgc
      901 gggatttcgc gtcgagatct ccggccaagg attgggcgcc ggcgacgccc gcgcccacga
      961 acaggcacag cgtcgtggca acgacggaca ggtgacgaag cttcatcgaa gtctctcctt
     1021 ggttatagat cagagcacgc agtgtgcacc cgcgagcgcc tgctgcgcgc agcgaatgtt
     1081 cgaatagccc accagcacca tcaagttcac gagcccgcgc tcgccgaacg cgtcgcgcgc
     1141 cgcagcgaag gtttggtcgg acacgaagcg cgtgccgagc aactcgttgg cgaagcgccg
     1201 agccgtagcc gcatcttgcg atgtggcgtc cgatggagga cgcagagccc tggcgctgga
     1261 ggggctccat atctcccgga ccagcgacgt cgcagtcgtg cgcgcttcgg caggggggct
     1321 cgcctcctgc gccaaagcct cgtggagcgc ctcgagcgcc ttgcgcgtat cctcgttgag
     1381 gatcgcaggg cgcggcgtta ccgtgccgac cggttcgcgc cggaactcgc cgggtgtcag
     1441 cggcacgagc gcgtgcgcgg ctgcggccgc ctcggccggc gcatccgccg gcaacggata
     1501 gcgatcgacg ttcaacagca tcgatacgta ctcgtagtac gccgcgatcg tgaccgtgct
     1561 gagcagccgg cgctcgccga gcacgtcgag cgcttcgcgg taagtcgcat ccgtgatgcg
     1621 gcgcgtgtag agcagctcgt cggccacgcg ccaaaccatc gcgtcctcgg ccggcatcgc
     1681 ggcgaggtcg ggcttctcgt gcgcggcgat cgccgctatc acagccgcat cgatgccctc
     1741 gtcgcgcgcg tagcgctcgt gcgcgtacca ttcataggtc gacgtccagg cgcgcccggc
     1801 catcagcgtg gctagctcgc gcaatcgccc ggacagtccg gacgagaagc ggatcgcatt
     1861 gccgagctgc tgcgactgct cgccgaccgt cggcgagcgc aacagcgcat tgaacgggcc
     1921 gttgccggtc gtgttcgtaa cggcccgggc gctgttcacg acgttgtaga gcagcgcgcg
     1981 ctgttcctcc gtcatctcgc ggtagtgcag gccgcgaaat cgatcgccgc gcagctggat
     2041 gctctcgatc ggcagcggct gcgcgggcgc ctgcgcggct gcaccgctcg ctgctgcgac
     2101 ggcggcgagc acggcagccg cgagccacgc ggcgttcacg gcccgaggcc cgaaggcaag
     2161 cgtggcgacg aaagcagctc cgcgaacacc tgccaccgct tctgcgcatc gccgccggcc
     2221 tggcgctcga cgtaggcggc cacgaggtcc tcaccgaggt tgtagttgat cacgtacgca
     2281 ccgtattgat cgatgaaccg cacgcgttgg gcggcacgct ccggcgtcat caacacgtac
     2341 gtctcgtgcc acttcgcagc ggccgcggcg tcgatcgtgc cattacgata gcggcgtgcc
     2401 gcctcgttgc cagcatagga gagctgcttc acgagctccg cgatctcgta gtacgtgttc
     2461 gcttgcgatc catcgagacc ggcggccggg aacagcactt cgcgctcgaa cgcacgcctc
     2521 tcctcttctg gaaacgcgac gtcgatgccg taattcgccg tgccctccgc gatcagcgat
     2581 tgcggcgaga acaatgcata caccgagaac tcgacccacc cgcgatcggt gtacaggctc
     2641 ttctcgagca gcatgttgta gacgtgatgg cccggatagc cttcgtggca cgcgaggtcg
     2701 accgcgcgat cgatatagat tggcagatcg gtgttgatct caatcaggct acggtgctta
     2761 ccctgatacc agttgtagcc gctccaggtt tttcccgtga cgtactcgag cgtgaagctc
     2821 tcgtcggcag gtagctcgat gtgcctgagc gtgcgcgcgc gacacgcgtc gatcgccgcg
     2881 tcgaacaccg cggatagccg ctcgctcgga atcacgaact ctgcacggta ggcctcgtag
     2941 cgcccggaga ctggaccctc cccgggcaac cggcgcgcga gctcgtcgag cacgcgtgcg
     3001 aactcctctt ccgtgtgcgt cggcgcgacg gcgtcgtaca gcgcctcgga ctcggcgtcg
     3061 aagtcgagat gctggccgcc cagcatcgcg acgcgcgcgc gcagggactc gagctgacgg
     3121 gtcaggtact cgtgccggag ccgcacgatt tccgctgcgc ccggcggcgc tgccaggctg
     3181 gccagcgact cgagcgccgc c
//
LOCUS       DATCUD010000355         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81603, whole genome shotgun sequence.
ACCESSION   DATCUD010000355 DATCUD010000000
VERSION     DATCUD010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81603"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(184..594)
                     /locus_tag="VIQ99_05290"
     CDS             complement(184..594)
                     /locus_tag="VIQ99_05290"
                     /inference="COORDINATES: protein motif:HMM:TIGR02436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY9182591.1"
                     /translation="MAFDHDRLDVYQRTLELLDQVDRILEQMPPGRAHLKDQLDRAAT
                     SVLLNIAEGAGEFSLADKQRFYRMARRSATESAAVLDIIKRRGHAPREMLDLARDLLL
                     RIVSMLIRMTHSDTSGTGTGTGTPASRAGTGAGR"
     gene            672..1540
                     /locus_tag="VIQ99_05295"
                     /pseudo
     CDS             672..1540
                     /locus_tag="VIQ99_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013217566.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          292 a          559 c          593 g          286 t
ORIGIN      
        1 ttcttcggca tctcgttcga gtggcgcgcg ctgccgttcg cctggaacac gtcgggcacc
       61 gacgaggtca accaggacgg cgaggcgttc cccgacggca ccattcgttg ctacgggatg
      121 gccgcggaag cgccggcgat cgtgctccgc tagcaggctg ctgagaaacg ccgaaggcgt
      181 tgctcagcgg cctgctcccg tgccagcccg cgaagcgggc gtgcccgtgc ccgtgcccgt
      241 gcccgacgtg tcggagtggg tcatgcggat gagcatcgag acgatgcgca ggagcaggtc
      301 tcgagcgagg tcgagcatct cgcggggcgc gtgaccgcgt cgcttgatga tgtcgagcac
      361 agcggccgac tcggtcgccg agcgacgcgc catccggtag aaacgctgct tgtccgcgag
      421 gctgaactcg ccagcgcctt cggcgatgtt gagcaagacg ctggtggcag cgcggtcgag
      481 ctggtccttg aggtgggcgc gacccggtgg catctgctcg aggatgcggt cgacttggtc
      541 gagcagttcg agggtgcgct gatagacgtc gaggcggtcg tggtcgaagg ccatacccct
      601 gtatcgagcg gagcgcgtgg aagttgcgtc ctggatcgac atcgaagcgt gggcgtgatc
      661 tatctggggg catgcgcgga cggcccaacg accaacgctc gatgctgtgc ctcgtgtcgc
      721 ccgagtcgag gatccctcgc gaccatccgt tgcgcgacat caagaggctg gcggaccaag
      781 cgctcgatgc gctgtcgccg acgttcgatg cgatggatgc gtcgagtgga cggccgtcgg
      841 ttccaccgga acgccttctg aagagcctgt tgctcatcgc tctgcactcg gttcgcagcg
      901 agcgtcagtt ctgcgaacag ctcgagtaca accttctgtt ccggtggttt ctcgacatgg
      961 actcgctcga agaggcgttc gacgcgagca ccttcagccg gaaccggcag cggctgatgg
     1021 agcacgaggt ggcgggcgag ttcttcgcag cgatccgcga acaggccatg gacttgatga
     1081 gcgccgagca cttcagtgtc gacggcacgc tcatcgaggc gtgggcaggc tgccgagttt
     1141 ctcagcagcc tgcgcgaacg ggtcggccga acgcgagacg gccctctcga tgctcgacga
     1201 gcacgcgccc caaggcgcca cggtcggggc cgaccgtggc tacgacactc gagacttcgt
     1261 gcgtcgatgt cgcgacgctc gcatccgtcc gcacgtggcg cagcatcgca acgagcgccg
     1321 cagctccgcg atcgaccggc gcacgacgcg acatctgggt tacgagctga gccagaagat
     1381 tcgcatgcgc atcgaggcca tcttcggctg ggccaagagc atcggaggac tccgcagaac
     1441 gaggcttcga ggccgcccac gaacccagct tgctgcgcac atcgtggccg ccgcgtacaa
     1501 cctgttacgc atcgccaagc tccgacgcgc caccacatga cgccgtgtca tccgctcgag
     1561 gcccgccttc gccgcgcgac tcctacccca cgtcgggcac gggcacgggc acgggcacgg
     1621 gcacgggagc aggcaggctg agaaccggcc ctgccgggcc gtttctcagc agcctgctag
     1681 atcggccctg ggtccacgaa acaacggatc gtcgtctcga tccggaagtt
//
LOCUS       DATCUD010000356         2396 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17800, whole genome shotgun sequence.
ACCESSION   DATCUD010000356 DATCUD010000000
VERSION     DATCUD010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2396
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17800"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..383
                     /locus_tag="VIQ99_05300"
     CDS             <1..383
                     /locus_tag="VIQ99_05300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182592.1"
                     /translation="QFEHSNKMQSIEIYTPIRENGAFIGLNHETILYDEEALAEPVRI
                     VRNLHKINNFTDQTQVPYAFIECVQTIFSVNGVNTPLTPGTKIEYEMPDMYGRPWAKI
                     WEEHFEQGMSKPDVTEDLFDFSDN"
     gene            424..1794
                     /locus_tag="VIQ99_05305"
     CDS             424..1794
                     /locus_tag="VIQ99_05305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182593.1"
                     /translation="MTNKSWSVATVAAALAIAAPLAGQESPQIDFKSVGRGAPVTVDA
                     RALPVIGATYQGGPGGGPQANPATPRTFVGSAPPGETPKGIEPLPRDMFTSDDFYKDR
                     DLWSDPRYFRCNSTVAIEDMWTQRGAIGQNGPKSAGWGRCDSDYPREAIVSPYPFKTA
                     QEHYEALKAETTKRGGPTKHTYATVPGDEWTGRYGRASTESWYQARKMQVPTMLSLLT
                     PKYQQYLVQEAYHSGNTNVAHWQSQYCWPEGFMRRWHQAAIRDHYITVTPQQVQIMTG
                     IARNFITNILIGREFDMSGDTPRLGADVPRWYGETIGFWDADTLITWTSNVIGWKVHA
                     DFEFSNKMQTIEIYSPFRDASGKFLGLNHEAIFYDEDALVEPIRIVRNFDKLGDLTEG
                     PPYIYIDCVQTIYPINGKATPVTPGTTFEFEQLDMYGRPWGYLWEKYYEQHMERPEEE
                     DIFSFE"
     gene            1816..>2396
                     /locus_tag="VIQ99_05310"
     CDS             1816..>2396
                     /locus_tag="VIQ99_05310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182594.1"
                     /translation="MLKRVAAIVVWLGLVGSVQAQETEPAAAASPLTSRAVMTSDEVV
                     RILDETVDWYRMLGVQQQSATQPSDLLILYANRQAADRVVALVFELARANTELLSSQA
                     EIQEQAADATTTPQLLQRDQRDLDARKARIEAEIAAAQRELPGAAPEERATLQAKVSE
                     LQSELDLLNARGNLVNHMMEFAHETDANGSGVSA"
BASE COUNT          507 a          742 c          776 g          371 t
ORIGIN      
        1 cgcaattcga gcactcgaac aagatgcaat cgatcgagat ctacacgccg attcgcgaga
       61 acggcgcctt catcggcctg aaccacgaga cgatcctcta cgatgaggag gcgctggcgg
      121 agccggtgcg aatcgtgcgc aacctgcaca agatcaacaa tttcaccgac caaacccaag
      181 taccgtacgc attcatcgaa tgcgtgcaga cgatcttctc ggtcaacggc gtcaacacgc
      241 cgctcacgcc gggcaccaag atcgagtacg agatgcccga catgtacggc cgcccgtggg
      301 ccaagatctg ggaagagcac ttcgagcaag gtatgagcaa gcccgacgtg accgaggact
      361 tgttcgactt cagcgacaac taaaggacta gcggccgtga ttcggcgtga ccgggggata
      421 cagatgacga acaagagctg gagcgttgct acggttgcgg ctgcgctcgc gatcgctgcg
      481 ccgttggcgg gacaggagag cccgcagatc gacttcaaga gcgtcggccg cggcgcaccg
      541 gtgacggtgg acgcgcgcgc gttgccggtg attggcgcta cgtaccaagg aggtccgggc
      601 ggcggtccgc aagcgaatcc cgcaaccccg cggacgttcg tcggctcggc tccgcccggt
      661 gaaaccccga agggtatcga gccgctgccg cgcgacatgt tcacgtccga cgacttctac
      721 aaggacaggg atctctggtc cgatccgcgt tacttccgct gcaactcgac ggtcgcgatc
      781 gaggacatgt ggacgcagcg cggcgcaatc ggccagaacg ggcccaagtc ggcgggttgg
      841 ggacgttgcg acagcgacta tccgcgcgaa gcgatcgtga gcccgtatcc gttcaagacg
      901 gcccaagagc actatgaagc gctgaaagcc gagacgacga agcgcggcgg gccgacgaag
      961 cacacgtacg cgaccgtgcc cggcgacgag tggacgggcc gctacggtcg ggcgtcgacc
     1021 gagagctggt accaggcgcg caagatgcag gtcccgacga tgctgtcgct gctgactccg
     1081 aaatatcagc agtacctggt gcaggaggcc tatcactcgg gcaacacgaa cgtcgcgcat
     1141 tggcagtcgc agtactgctg gcccgaaggc ttcatgcgcc gctggcacca ggccgcgatc
     1201 cgcgatcact acatcacggt gacgccgcag caggtccaga tcatgaccgg catcgcgcgc
     1261 aacttcatca cgaacatcct gatcggccgc gagttcgaca tgtccggcga tacgccacgg
     1321 ctcggcgccg acgtgccgcg ctggtacggc gagaccatcg gcttctggga cgccgacacg
     1381 ctgatcacgt ggacgtcgaa cgtgatcggc tggaaggtgc atgccgactt cgagttctcg
     1441 aacaagatgc aaacgatcga gatctactcg ccgttccgcg atgcgagcgg caagttcctg
     1501 gggttgaacc acgaagcgat cttctacgac gaggacgcgc tcgtggagcc gatccggatt
     1561 gtgcgcaact tcgacaagct cggcgatctc accgaaggcc cgccgtatat ctacatcgac
     1621 tgcgtgcaga cgatctaccc gatcaacggc aaggcgacgc ccgtgacgcc cggcacgacg
     1681 ttcgagttcg agcagctcga tatgtacggt cggccgtggg gatacctttg ggagaagtac
     1741 tacgagcagc acatggagcg tcccgaagag gaggacatct tcagcttcga gtgaccgcga
     1801 agcgatcggc ccactatgct gaagcgagtc gctgcgattg tcgtttggtt gggcctcgtg
     1861 gggtcggtcc aagcgcaaga gacggagccg gcggccgccg cctcaccgct gacgtcacgg
     1921 gccgtcatga cgagcgacga ggtcgtccgc attctcgacg agacggtcga ctggtatcgg
     1981 atgctcggtg ttcagcaaca atcggccacg cagccaagcg acctactcat tctttatgcg
     2041 aatcgacagg ccgccgatcg cgttgtcgcg ctcgtattcg agcttgcgcg cgcgaacact
     2101 gagcttctga gcagccaggc ggagatacag gaacaggccg ccgacgcgac gaccacgccg
     2161 cagctattgc agcgcgacca acgcgacctg gacgcgcgca aggcgaggat cgaggccgag
     2221 atcgcagctg cgcaacgcga gctgcccggc gcagcgcccg aggagcgcgc gacgctgcaa
     2281 gcgaaggtgt cggagctaca gagcgagctg gacctgctca acgcgcgcgg gaacctcgtg
     2341 aatcacatga tggagttcgc gcacgagacg gatgcgaacg gctccggcgt cagcgc
//
LOCUS       DATCUD010000357         2000 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10486, whole genome shotgun sequence.
ACCESSION   DATCUD010000357 DATCUD010000000
VERSION     DATCUD010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2000
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10486"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            262..1176
                     /locus_tag="VIQ99_05315"
     CDS             262..1176
                     /locus_tag="VIQ99_05315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182595.1"
                     /translation="MTSWPEAVQALLRDIGVKTIGDCARLPRDGFARRVGHVYLRELD
                     RAFGREVELRAGFAAPESWSTKVELFEESVDSALFMEAVELILDELTSELRKRQAQIR
                     SFEIAFEHLRRPPTVENFELLEPVHERERLLTLVRDRIERSVLPVPALALRFRSGVLL
                     PLTLKDADLFEKQPLEELVRVLLERLRERFGQAAVYGLRAVEEHRPERAWAKWGGLEG
                     RLRNRERSERQGRPLWLLPSPVPLSSAEARRASLTLTSGPERIESGWWDECDVGRDYY
                     TARNAHGQKLWVFRDHRTRSWYLHGLFG"
     gene            1189..>2000
                     /locus_tag="VIQ99_05320"
     CDS             1189..>2000
                     /locus_tag="VIQ99_05320"
                     /inference="COORDINATES: protein motif:HMM:NF014826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEY9182596.1"
                     /translation="MNPDGRIDPVYAELHCLSNFSFLRGASHPHELVTTAADLGYAGL
                     ALTDECSMAGVVRAHAAAKDLPLQLVVGSELTCEDGLKVVALAESREAYAALCGLISQ
                     ARRAAPKGEYRIDRSALAEHLQSRGLLLWVPDIAERTGQVGTGRWLRERFAGRLWLAV
                     ELFNAGNDRRWLAEATALGLELDVPLVAAGNVHMHCRERRMLQDTLTAIRRKTPLENL
                     GYELHSNAERSLRPIGELVRRYPAALLRESLAILERCRFSLEELRYEYPRELV"
BASE COUNT          333 a          580 c          682 g          405 t
ORIGIN      
        1 tgggcacaaa ggttcacttc gatagtgagc gttgagtctt gcgagagcct gctgctcgaa
       61 gtcgcaggaa gcctcaagct cttcggcggg ctcgacgcaa tcaaggccga gctccgccgg
      121 gagctcgttc ggcgctccca cgttttccga ttgtgttcag ctccgacggc cacggccgct
      181 ttgtggctgt cgcgagcagg cagcgcggat gtcgcgtctc gacatgaatt ggccgggagc
      241 ttgggggggc tgccgttacg tgtgacgagc tggcccgaag ccgtgcaggc gctgttgcgc
      301 gatatcggcg taaaaaccat cggtgactgt gcgcggttgc cgagggatgg atttgctcgt
      361 cgagtcggtc acgtctattt gcgcgagctc gaccgcgcgt tcggtcgcga ggtcgagctc
      421 agagccggat ttgcggcacc ggaaagttgg agcaccaagg tcgagctatt cgaggagagc
      481 gtcgatagcg cgttattcat ggaagccgtc gaactgattc tcgatgagct cacatccgag
      541 ctccggaagc ggcaggctca gatccgcagc ttcgagattg cgttcgagca cctccgtcgg
      601 ccaccgaccg tcgaaaattt cgaattgctc gagcccgtgc acgagcgcga gcggctgctc
      661 actctcgtta gagatcgaat cgagcgaagc gtgctgcccg ttcccgccct cgcgctgcgc
      721 tttcgcagcg gtgtcttgct gcccttgacg ctcaaggacg cggacttgtt cgagaagcaa
      781 cctttggagg agctggtgcg ggtgctgctt gagcgcttga gagagcgatt cggtcaggcg
      841 gcggtgtatg gactgcgtgc ggttgaagag catcgccccg aaagggcatg ggcgaaatgg
      901 ggtgggctcg aaggccgctt gcgaaatcgc gaacgatccg agaggcaagg gcggccattg
      961 tggctgctgc catctcccgt accgttgtcg tcggccgagg ctcggcgggc ttcgctcacg
     1021 ctcacctcgg gtcccgagcg aatcgagagc ggatggtggg acgagtgcga cgtcggccgc
     1081 gattactaca cggccaggaa tgctcacggt caaaagttgt gggtgtttcg cgaccaccga
     1141 actcgttctt ggtatttgca cgggctgttc ggttgaacgg agtcgaccat gaatcccgat
     1201 ggtcgcatcg atccggtgta tgccgagctg cactgcctca gcaatttctc gttcttgcgc
     1261 ggcgcctcgc atccccacga gctcgtgaca accgcggccg acctcggcta tgcggggctc
     1321 gcattgaccg acgagtgctc gatggccggt gtcgtccgtg cgcatgcggc cgccaaggac
     1381 ttgccgcttc agctcgtcgt tggcagcgag ctcacgtgtg aggatgggct caaggtagtc
     1441 gcgctggccg agagtcgcga agcttacgca gcgctttgtg ggctcatcag tcaagcgcga
     1501 cgcgcggcgc cgaaaggcga gtaccgaatc gatcgctccg ctctcgccga gcatctgcaa
     1561 tcgcgaggct tgttgctctg ggtgccggac attgccgagc gaacgggtca agtcgggacg
     1621 ggtcgctggt tgcgagagcg cttcgcgggc cgtttatggt tggcagtgga gctgttcaat
     1681 gccggcaacg accggcgttg gcttgccgag gccacggcgc ttgggcttga gctcgacgtt
     1741 ccgttggtcg cggcgggcaa cgtgcacatg cactgccgcg agcgacggat gttgcaagac
     1801 actctgaccg cgatccggcg aaaaacgccg ctcgagaatc ttggttacga gctgcattcg
     1861 aacgcggagc gatccttgcg tccgatcggc gagctcgttc ggcggtatcc tgccgcgctg
     1921 ctgcgagaat ccctcgcgat cctcgagcgc tgccggttct cgctcgagga gttgcgctac
     1981 gagtacccgc gcgagctcgt
//
LOCUS       DATCUD010000358         1533 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_74666, whole genome shotgun sequence.
ACCESSION   DATCUD010000358 DATCUD010000000
VERSION     DATCUD010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1533
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74666"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1533)
                     /locus_tag="VIQ99_05325"
     CDS             complement(<1..>1533)
                     /locus_tag="VIQ99_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018507105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182597.1"
                     /translation="FLGGTAGRRARHRLFGAVALAIVLAVSLVAFKLVVLKMLPFDNK
                     SELQVVVDMPEGSSVERTARVLDDIAEHVRTVPEVSNYQTYAGTAAPINFNGLVRQYY
                     LRSGANVGDVQVNLVDKADRDRQSHDIARSLREPLAAIGQRHGASVKIVEVPPGPPVQ
                     APLVAEIYGPDYDGQQRIATELNALFAATDDIVDVDDSVEAAAPRWLFEVDRHKAALL
                     GVAQTEVTNVLAAALGGEDATYLHDEHAKYPIPVRLELPVADKADLDDLLMLRVAGRD
                     GRLVPLAEIVRPVESQWERTIYHKDLLPVVFVTADMAGDLDSPLYGMLSLAAGIAAAP
                     PGGRELPQRYVAQPTDTYEYSLKWDGEWQVTYDTFRDMGIAYSVGLILIYLLVVAQFG
                     SYSVPLVIMAPIPLTIIGVMPGHAVLGAQFTATSMIGMIALAGIIVRNSILLVDFVNQ
                     ELAGGATLEDAVIRAGAVRAKPIALTALAAVLGAFFILDDPIFNGLAIALLGGILVST
                     LLT"
BASE COUNT          261 a          501 c          517 g          254 t
ORIGIN      
        1 gtcagcagcg tcgataccag gatgccgccg agaagggcga tcgccagccc gttgaagatc
       61 gggtcatcga ggatgaaaaa cgcgcccagg acagcggcga gagcggtcag ggcgatgggc
      121 ttggcgcgca cggcgcccgc ccggattacc gcgtcctcca acgtcgcgcc cccggcgagc
      181 tcctgattca cgaagtcgac gagcagtatc gagttgcgca cgatgatccc ggccagcgcg
      241 atcattccga tcatcgaggt cgccgtgaat tgcgcgccga gcacggcgtg gcccggcatg
      301 actccgatga tcgtgagagg gatcggcgcc atgatcacga gcggcacgga gtacgagccg
      361 aactgggcca ccacgagcag atagatcagt atcagcccca cgctataggc gattcccatg
      421 tcgcggaacg tgtcgtaggt gacctgccat tcgccgtccc acttgaggct gtactcgtag
      481 gtgtcggtcg gttgagcgac atagcgctgc gggagctcgc gcccgcccgg tggcgcggcg
      541 gcgatgcccg ccgcgaggct cagcatgccg taaagggggc tgtcgagatc gccggccatg
      601 tccgccgtca cgaacacgac gggaagaagg tccttgtgat agatcgtcct ttcccattgg
      661 ctctcgaccg gccgcacgat ctcggcgagc ggcacgagtc gcccatcccg tcccgcgacg
      721 cgcagcatca gcaaatcgtc gaggtcggcc ttgtcggcca ccggtagctc gagccggacc
      781 ggaatcggat acttggcgtg ctcgtcatgc aggtatgtcg cgtcctcgcc gccgagcgcg
      841 gctgccaaga cgttcgtgac ctccgtctgc gcgacgccga gcaaggccgc cttgtggcga
      901 tcgacctcga acagccaacg cggtgcggcc gcctcgacgc tgtcgtcgac atcgacgata
      961 tcgtccgtgg ccgcgaacag ggcgttcagc tcggttgcga ttcgctgctg accgtcgtaa
     1021 tcggggccgt agatctccgc gacgagtgga gcctgcaccg gcggacccgg tggcacctct
     1081 acgatcttga ccgatgcccc gtgtcgttgc ccgatcgcgg cgagcggctc tcgcaggctg
     1141 cgcgcgatgt cgtggctctg ccggtcacgg tcggctttgt cgacgagatt gacctgcacg
     1201 tcgccgacgt ttgcgccgga gcgcaggtag tactggcgca cgaggccatt gaagttgatc
     1261 ggcgcggccg tgcctgcgta ggtctggtag ttgctgacct ccggaaccgt gcggacgtgc
     1321 tcggcgatgt cgtcgagcac gcgcgccgtg cgctccaccg acgagccctc gggcatgtcg
     1381 acgacgacct ggagctccga cttgttgtcg aatggcagca tcttcagcac gacgagcttg
     1441 aacgcgacga ggctcacggc aagcacgatc gcgagcgcga cggcgccgaa caaccgatgg
     1501 cgtgcacgcc ggccggccgt gccgcccagg aac
//
LOCUS       DATCUD010000359         2479 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10511, whole genome shotgun sequence.
ACCESSION   DATCUD010000359 DATCUD010000000
VERSION     DATCUD010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10511"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(31..978)
                     /locus_tag="VIQ99_05330"
     CDS             complement(31..978)
                     /locus_tag="VIQ99_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182598.1"
                     /translation="MRLTVAGWLGFCAALPAAAHEIELASIETARTVLGTRDDFVSRL
                     SPFDRAARLGAAGEVSEAEYLAFVTAAAREWSNDERARLTAAFAAIEPQLAALLPELG
                     MPILIVKTSGEEEGGAGYTRANAVMLPQAANEPRELQRTLAHEIFHIASRNHTDMKRA
                     LYGAIGFEECGEVALPAALAVRKMTNPDAPINEHCIEITVDGAEVSAMPILLARQERF
                     DPAAGVPFFGYLTLSMLVVDRGGTPAKPVLRAGAPLLVPMNRVAGFFEQIGRNTSYII
                     HAEEILASNFERLVLGEQDAPSPEVLARIRAELVRAAGR"
     gene            complement(988..1344)
                     /locus_tag="VIQ99_05335"
     CDS             complement(988..1344)
                     /locus_tag="VIQ99_05335"
                     /inference="COORDINATES: protein motif:HMM:NF016211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HEY9182599.1"
                     /translation="MQTDTHPFDNVSTKVIACAVIVGCLLLGLAGLVLPLIPGLLFIA
                     IAVIVAAKLSPKFADTLRQNDTLRPYLDKSDRMAGLSPGQQAKVVGLLLLKAIIEGVE
                     WLVAGVMKLVRMAERV"
     gene            complement(1356..1634)
                     /locus_tag="VIQ99_05340"
     CDS             complement(1356..1634)
                     /locus_tag="VIQ99_05340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182600.1"
                     /translation="MNFLGALLTFVAIVVGLVVLVPVLGVALAIAFTLGGVLLWLLPI
                     VIIAASDKVGGAEKILWILAIIFLSWFAWILYFFFAPVFDRPERHSYY"
     gene            1862..2449
                     /locus_tag="VIQ99_05345"
     CDS             1862..2449
                     /locus_tag="VIQ99_05345"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9182601.1"
                     /translation="MPRTIPAMLAATVVLATGACEQPPAPNPPPAAPAAAPTTTDATD
                     TFDPLETIEARRLLMLEAGRQIEPIDLYTIGTPADPADLRAAAVTIESLLPAFPHLFP
                     SSTNLFDPTTREPPTTALPAVWENFAAFQAMNVATEEAAAALAAADGEESIKAAAQNL
                     RAACDACHQAFTKRYVPPQVTDEDRDFDFEEFLPK"
BASE COUNT          463 a          863 c          774 g          379 t
ORIGIN      
        1 ggtgcgcagg atacgtcgaa ctagcccgcg ctaacggccc gcggcgcgca cgagctccgc
       61 gcgtatccgc gcgagcacct ccggcgacgg cgcatcctgc tcgccgagca cgagccgctc
      121 gaaattcgac gccaggatct cctcggcgtg aatgatgtag ctcgtgttgc gcccgatttg
      181 ctcgaagaat cccgcaacgc gattcatcgg tacgaggagc ggcgcgccgg cgcgcagcac
      241 cggctttgcc ggcgtgccgc cgcgatcgac gaccaacatc gacaacgtca ggtagccgaa
      301 gaacgggact ccggcggcgg gatcgaaacg ttcttggcgt gcgagcagga tcggcatggc
      361 tgagacttcc gcgccgtcga ccgtgatctc gatgcagtgc tcgttgatcg gcgcatcggg
      421 gttcgtcatc ttgcgcacgg cgagcgcggc cggcagcgcc acttcaccgc attcctcgaa
      481 acctatcgcg ccatacagcg cgcgtttcat gtccgtgtgg ttccgcgacg cgatgtgaaa
      541 gatctcgtgc gccagcgtgc gctgcagctc gcgcggctcg ttcgcggctt gtggcaacat
      601 cacggcattc gcgcgcgtgt agccggcgcc accctcctcc tctccgctcg tcttcacgat
      661 caggatcggc atgccgagct ccggcaacaa cgctgcgagc tgaggctcga tcgccgcgaa
      721 cgcggccgtc aatcgtgcgc gctcatcatt cgaccactcg cgcgcagcgg cggttacgaa
      781 cgcaagatac tcggcttcgg agacttcgcc ggcggcgccg agacgcgcag cacgatcgaa
      841 cgggctcagg cggctcacga agtcgtcgcg cgtgccgagc acggtgcgcg cggtctcgat
      901 ggacgcgagc tcgatctcgt gcgccgccgc cggcagggcg gcgcagaacc cgagccagcc
      961 ggcaacggtc agacgcatcc gcggacttta cacgcgctcg gccatcctca cgagtttcat
     1021 gacgcccgcg acgagccatt ccacgccttc gatgatcgcc ttcagcagca gcaggcccac
     1081 gaccttggct tgctgccccg gcgacagccc ggccatgcga tccgacttgt cgaggtacgg
     1141 gcgcagcgtg tcgttctgtc gcagcgtgtc cgcgaacttc ggcgagagct tggcggccac
     1201 gatcaccgcg atggcgatga acagcaaacc cggaatcagc ggcagcacga gtcccgcgag
     1261 ccccagcagc aggcacccga cgatgacggc gcaagcgatg actttggtcg agacgttgtc
     1321 gaacggatgc gtatcggtct gcattgcacg attcctcagt agtagctgtg acgttccggc
     1381 ctgtcgaaga ccggcgcaaa gaagaaataa agaatccacg cgaaccacga caagaagatg
     1441 atcgcgagga tccagaggat cttctctgcc cctccgactt tgtccgaggc cgcgatgatc
     1501 acgatcggca acagccacaa cagcacgccg ccgagcgtga acgcgatcgc gagcgcgacg
     1561 ccgagcaccg gcacgagcac gacgaggccc accacgatgg ccacgaaggt caacaaggcg
     1621 ccaagaaagt tcatgacgag ctccgaatcg ggtcaacccc tgcagctcct attgccaaac
     1681 gcgtgccaaa atagcgttac ccatcatttt caacgagtta cgagccgatc gccgccgggc
     1741 gcgtagccgc agagcccaac aagtggtgca aatcgccact cacggctcgt tcggatttcc
     1801 acactggctc cggcacggac ggggccccaa gatcgaccca acgccctacg gagccccggt
     1861 catgcctcga acgatcccgg cgatgctggc ggccactgtg gttctcgcga ccggcgcttg
     1921 cgaacagcct cctgcgccga accccccacc cgcggcgccg gcggctgcgc cgaccaccac
     1981 agacgcgacc gacacgttcg atccgctcga aacgatcgag gcgcgccgcc tgctcatgct
     2041 cgaggccggg aggcagatcg agccgatcga tctctatacg atcgggacgc ccgcggaccc
     2101 cgccgacctc cgcgcggcgg ctgtcacgat cgagtcgctg ctaccggcgt ttccgcatct
     2161 gttcccgtcg agcacgaacc ttttcgaccc gaccacgcgc gagccgccga cgacggctct
     2221 gccggcggtc tgggagaact tcgcggcatt tcaggcgatg aacgtcgcca ccgaggaagc
     2281 cgcggccgct ttggctgcgg ccgacggcga ggagtcgatc aaggcagccg cacagaacct
     2341 gcgcgccgcg tgcgacgcgt gtcaccaggc gttcacgaag cgctatgtgc cgccgcaggt
     2401 gaccgacgag gatcgcgact tcgacttcga ggagttcctg ccgaagtgac ggcgctaccg
     2461 cccgccgcta cgtcgggcg
//
LOCUS       DATCUD010000360         1775 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46075, whole genome shotgun sequence.
ACCESSION   DATCUD010000360 DATCUD010000000
VERSION     DATCUD010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1775
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46075"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..165
                     /locus_tag="VIQ99_05350"
     CDS             <1..165
                     /locus_tag="VIQ99_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008314743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEY9182602.1"
                     /translation="VQVAGGASCHVGYRTCFYRRIPLGRGNKPLEFTEQSKVFDPQVV
                     YGDAPNPTKL"
     gene            200..1711
                     /locus_tag="VIQ99_05355"
     CDS             200..1711
                     /locus_tag="VIQ99_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013428496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9182603.1"
                     /translation="MTDEPRPLTDELLTGEQYLASLRDGREVYLYGERIRDVTAHPAF
                     RNSARSIARLYDALHDPAARDTLTTVDRLGIRTHRFFAPSWSAAELLAARDAIAQWSR
                     LTYGFMGRTPDYKAAFMAALGANPELYAPFDENARAWYRRYAQKALFLNHVLVNPPVD
                     RNKPVHEVADVYLHVVRETDAGVIVSGAKMLATGSALTHATFVAQNSSVNLEAGKAED
                     YALVFIAPLDTPGSRLLCRASYEQNAHSPFDHPLSSRFDENDAVLVFDEALIPWENFL
                     VYRDVERANALYAASGFFNRFNLQAGTRLAVKLDFMTGLLARGLDMNGTSEFRGVQAA
                     LGEVIAWRTLLWTMTTAMAAEPQAGPGGSMIPRSDYAAALRVFSTSAWPAVKEVFETA
                     LGGAPIVTPAGREDLLSPSLRPLIDRYYRGTGATALERIKLFKVVWDAIGTEFGGRHE
                     LYERNYAGNHEQVRMDALKFARRSGMLDRCTELVERFLADYDLDGWKNETWRA"
BASE COUNT          288 a          601 c          601 g          285 t
ORIGIN      
        1 gtgcaggtcg cgggcggcgc gagctgccac gtcggctacc gcacgtgctt ctaccgacgc
       61 atcccgctcg ggcgtggcaa caagccgctc gagttcaccg agcagtcgaa ggtgttcgat
      121 ccgcaagtcg tgtacggcga cgcgccgaat ccgacgaagc tgtaacttcc ggctgagcgg
      181 caaggcgaaa cggacgacga tgaccgacga gccgcgccca ctcaccgacg agctgctgac
      241 cggcgagcaa tacctcgcga gcttgcgcga tggccgcgag gtgtacctgt acggcgagcg
      301 catccgcgac gtcacggcgc atccagcgtt tcggaactcg gcgcgctcga tcgcccggct
      361 ctacgacgcg ttgcacgacc cggccgcgcg ggacacgctg acgaccgtcg accgcctcgg
      421 aatccgcacg caccgcttct tcgcgccgag ctggtccgcc gccgagctct tggccgcgcg
      481 cgacgcgatc gcgcagtggt cgcgcctgac ctatggcttc atgggccgga cgccagacta
      541 caaggccgcg ttcatggcgg cgctcggtgc aaacccggag ctctacgcgc cgttcgacga
      601 gaatgcccgc gcctggtatc ggcgctacgc gcagaaggcg ctgttcttga atcacgtgct
      661 cgtgaatccg cccgtggacc gcaacaagcc cgtgcacgag gtcgccgacg tgtacttgca
      721 cgtcgtgcgc gagacggatg cgggcgtgat cgtgagcggc gcgaagatgc tcgcgaccgg
      781 gtcggcgctg actcatgcga cgttcgtcgc gcagaacagc tccgtgaacc tcgaagccgg
      841 caaagccgag gattacgctc tcgtgttcat cgcgcccctc gatacgccgg gtagccgcct
      901 gttgtgccgg gcgtcctacg agcagaatgc gcacagcccg ttcgaccacc cgctgtcgag
      961 ccgcttcgac gagaacgacg ccgtgctcgt gttcgacgag gcgttgatcc cgtgggagaa
     1021 cttcctcgtc taccgcgacg tcgagcgcgc gaacgcgttg tacgccgcgt cgggattctt
     1081 caaccgtttc aacctccagg ccggcactcg gctcgcggtg aagctggatt tcatgacggg
     1141 gctgctcgcg cgcgggctcg acatgaacgg cacgagcgaa ttccgcggcg tgcaggccgc
     1201 gctcggcgaa gtcatcgcgt ggcgcacact gctgtggacc atgacgaccg cgatggcggc
     1261 cgagccgcag gcggggcccg gcggctcgat gatcccgcgg tccgactacg ccgccgcgtt
     1321 gcgggtcttc tcgacgtcgg cgtggccggc cgtcaaggag gtcttcgaga ccgcgctcgg
     1381 gggcgcaccg atcgtcacgc ccgcggggcg cgaggacctg ctgagcccat cgctgcggcc
     1441 gttgatcgat cgctactacc gcggcaccgg agccacggcg ctcgagcgca tcaagctgtt
     1501 caaagtcgta tgggatgcga tcgggacgga gttcggtggg cggcacgagc tctatgagcg
     1561 caactacgcc ggcaatcacg agcaggttcg aatggacgcg ctgaagtttg cgcgtcgctc
     1621 gggtatgctc gatcgctgca ccgagctcgt cgagcgcttc ctcgccgact acgacctcga
     1681 cgggtggaag aacgagacgt ggcgggcgta ggcccggact aacccgtctc gtcgtcgtcg
     1741 agctcggccc cctccggtgc gagcatgtag cccgc
//
LOCUS       DATCUD010000361         1827 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3741, whole genome shotgun sequence.
ACCESSION   DATCUD010000361 DATCUD010000000
VERSION     DATCUD010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3741"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..587)
                     /locus_tag="VIQ99_05360"
     CDS             complement(<1..587)
                     /locus_tag="VIQ99_05360"
                     /inference="COORDINATES: protein motif:HMM:NF024118.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9182604.1"
                     /translation="MRLRFTSLGSGSRGNASLVEFDSTLLMIDCGLPYKVVEERLRAV
                     DRQPRDVTAILVTHEHADHAQGVATFAKRHNTPVWMTAGTASALPTITRVHHLSCHRE
                     LTVGGIGVQPYPVPHDAREPCQFTFTAAGRRLGMLTDAGHITPHMYERLGACDALALE
                     CNHDLEALQRGPYPESLKARVASRFGHLNNGQTTEL"
     gene            complement(629..976)
                     /locus_tag="VIQ99_05365"
     CDS             complement(629..976)
                     /locus_tag="VIQ99_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1820 family protein"
                     /protein_id="HEY9182605.1"
                     /translation="MASKPIYRVVFLNQGKVYEVYARHVSQTGSLFGFVEIEELVFDA
                     RKGIVVDPSEERLRIEFAGVKRTYLPMHYVLRIDEVDKQGVSKITNAEGGNVAQFPMP
                     MYTPQGKGGPTER"
     gene            1206..>1827
                     /gene="tagH"
                     /locus_tag="VIQ99_05370"
     CDS             1206..>1827
                     /gene="tagH"
                     /locus_tag="VIQ99_05370"
                     /inference="COORDINATES: protein motif:HMM:TIGR03354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0033103 - protein secretion by the type VI
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system-associated FHA domain
                     protein TagH"
                     /protein_id="HEY9182606.1"
                     /translation="MEFGHGGGTIGRSLESDWVLPDGQRYLSSRHASIDYRSGSYYIV
                     DTSTNGVYVNDSEQPVGRGNPQRLFTGDRIRLGEYEIGVEITDEDDTRETMTDDSHED
                     PVAKAQRVPPPDPTRADMVAPHEITAVGIEMLISEEVEVGQIQRAQKANAASLRLEEE
                     PPPSKHTEQSISQSATTLPRAEPPPVSAAAHLPAAKPTRQQRTGAVA"
BASE COUNT          334 a          612 c          581 g          300 t
ORIGIN      
        1 agctcggtcg tctgaccgtt gttcaagtgc ccgaaccggg acgcgacgcg cgccttcagc
       61 gactcgggat agggcccgcg ctgcagcgcc tcgaggtcgt gattgcactc gagcgcgagc
      121 gcatcgcacg cgccgagccg ctcgtacatg tgcggagtaa tgtggcccgc gtcggtcagc
      181 atgccgagcc gccttcctgc cgccgtgaac gtgaactggc acggctcacg cgcatcgtga
      241 ggcactgggt aaggctgcac gccgatgccg ccgaccgtga gctcgcggtg acagctcaag
      301 tggtggacgc gcgtgatcgt cggcagcgcg ctcgcagtgc ccgccgtcat ccataccggc
      361 gtgttgtgcc gtttcgcgaa cgtcgcgacg ccttgcgcgt ggtccgcgtg ctcgtgagtc
      421 acgagaatcg ccgtcacgtc gcgcggttgg cgatccacgg ctcggagccg ttcctcgacg
      481 accttgtacg gcagaccgca atcgatcatc agcaaggtcg agtcgaactc gaccagcgag
      541 gcgttgccgc ggctgccgct gccgagcgac gtgaacctga gcctcacgcc gcgatccgca
      601 tccgttgcag ctctcgcgct ctcacgcgct aacgttccgt ggggccgccc ttgccctgcg
      661 gtgtgtacat cggcatcgga aactgcgcga cgttgccgcc ctcggcgttc gtgatcttgc
      721 tgacgccctg tttatcgacc tcgtcgatcc ggagcacgta gtgcatgggc agatacgtgc
      781 gcttcacgcc cgcgaactcg attcgcaagc gctcctccga agggtctacg acgatgccct
      841 tgcgcgcgtc gaacacgagc tcctcgatct cgacgaagcc gaacagcgag cccgtctgac
      901 tgacgtgccg cgcatagact tcgtagacct tgccctggtt gagaaatacg acgcgataga
      961 tcggcttcga tgccatgcgt tgtccgccct gacgacgcac ggagcttagc acaggatttt
     1021 ctgagagccc gatcacaata acgtcgcgcc gcgctcggga aatccgtgcc tcgagggcta
     1081 gactcgcgcg cagggggagc tatggagtcg tgcgcgggca ctgtgcccgg gatcctggga
     1141 tcgatatggc cctacgcctg caaatcgtca gtcgacacgc ccaaggcttg ggcgagcgga
     1201 gctccatgga attcgggcat ggcggcggca cgatcggccg ctcgctcgaa agcgattggg
     1261 tgttgccgga cggtcaacgg tatctgtcga gcaggcatgc aagcatcgac taccgctctg
     1321 gcagctacta catagtcgat acctccacga acggtgtcta cgtcaacgac tccgagcagc
     1381 cggtcggtcg cggcaatccg caacggctct tcaccggcga tcgcatccgc ctcggcgagt
     1441 acgagatcgg cgtcgagatc accgatgagg acgacacgcg cgagacgatg accgacgatt
     1501 cgcacgagga cccggtcgcc aaggcacaac gcgtgccgcc gccggatccg actcgcgccg
     1561 acatggtcgc gccgcacgag atcactgccg tcggcatcga gatgctgatc agcgaagagg
     1621 tcgaggtcgg ccaaatccaa cgcgcgcaaa aagccaacgc ggcgagcttg cggctcgaag
     1681 aagaaccgcc tccctcgaaa cacacagagc aatccatcag ccaaagcgcg accacgctgc
     1741 cgcgggccga gcctcctccc gtcagcgcgg ctgcacacct gccggcggcc aagccgacac
     1801 ggcagcagag gacgggcgcg gtcgcgc
//
LOCUS       DATCUD010000362         1837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10525, whole genome shotgun sequence.
ACCESSION   DATCUD010000362 DATCUD010000000
VERSION     DATCUD010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10525"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1327)
                     /locus_tag="VIQ99_05375"
     CDS             complement(<1..1327)
                     /locus_tag="VIQ99_05375"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9182607.1"
                     /translation="MFVTKRHLSRRTLLRGAGAAIALPLLDSMIPARTALAQTAANPK
                     SRMGCIYIPHGATMDKWTPAATGRNFELSEILAPLAPFRDRLCVVSGLAHAQVAPWTG
                     EDTGGAENHVRAAAVFLSGAHPVKGDRAYVGPTVDQLAAAHVGQDTPLPSIELSIEEV
                     GLNCDANFTCAYRNTLAWKSATLPLPMENNPQVAFERLFGDGSTDAERAARRAEARSL
                     LDSVIEQVATLRTDLPAADRARLSDYLDEVREVERRVLQVDLKLNTGVGLPEAPVGVP
                     DTFEEHLNVMFDLQVLAYRTEITRISTLMLARENSNAVYPRSGVREGFHNASHHSNER
                     KNMDQFAVINRYHVAALTYFLDKLRATPDGDGTLLDHSIILYGSSLSDGNEHNFDPLP
                     IVLVGGASGRLDGGRHLKFAPQTPMANLLLAMLHKLGTPVESIGDSTEPL"
     gene            complement(1327..>1837)
                     /locus_tag="VIQ99_05380"
     CDS             complement(1327..>1837)
                     /locus_tag="VIQ99_05380"
                     /inference="COORDINATES: protein motif:HMM:NF019256.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1588 domain-containing protein"
                     /protein_id="HEY9182608.1"
                     /translation="GQWVLQNVLGTPPPPPPEGVETNLDETAPLGATATTMRQRLERH
                     MADPGCAACHDLMDPIGFALENFDFTGRWRDAEAGVAVDAAGVFIDGTAIAGPEGLRR
                     VLLQHRELFVATMTEKLLSYAIGRTLEARDMPAVREIVRRAARDDYRFSALVQGVVAS
                     VPMQMRVKH"
BASE COUNT          291 a          636 c          600 g          310 t
ORIGIN      
        1 ggagcggctc cgtgctgtcg ccgatgcttt ccaccggcgt accgagcttg tgcagcatcg
       61 cgagcagcag gttggccatc ggcgtctgcg gcgcgaattt caggtgccgg ccgccgtcga
      121 gccggcccga ggcgccaccc acgagcacta tgggcagcgg atcgaaattg tgctcgttgc
      181 cgtcgctcaa gctgctgccg tacagaatga tggaatgatc gagcaaggtg ccatcgccgt
      241 ccggcgtggc tcgcagcttg tcgaggaaat aggtcaacgc cgcgacgtga tagcggttga
      301 tcacggcgaa ctggtccatg ttcttgcgct cgttcgaatg gtgcgacgcg ttgtggaacc
      361 cttcgcgcac tccgctgcgc ggatacaccg cgttgctgtt ctcgcgcgcc agcatcagcg
      421 tggagatccg cgtgatctcg gttcggtagg cgagcacctg caggtcgaac atcacgttca
      481 agtgctcctc gaacgtgtcg ggcacgccga ccggtgcctc cggtagaccg accccggtgt
      541 tcagcttcaa gtcgacctgc agcacgcgcc gctcgacctc gcgcacctcg tcgagatagt
      601 cgctcaagcg cgcgcgatcg gcggccggca aatcggtgcg caacgtcgcg acctgctcga
      661 taacggaatc gagcaggctg cgcgcctcgg cacggcgggc cgcgcgctcc gcgtccgtgc
      721 tgccgtcgcc gaacaggcgc tcgaacgcga cctgcgggtt gttctccatc ggcaacggca
      781 acgtcgcgga tttccacgcc agcgtgttgc gatacgcgca ggtgaaattc gcatcgcagt
      841 tcaggcccac ctcttcgatc gacagctcga tcgagggcag cggcgtgtct tggccgacgt
      901 gcgcggccgc gagttgatcg accgttggcc cgacgtacgc ccggtccccc ttgacgggat
      961 gcgcgccgct caagaacacc gcggccgcgc gcacgtggtt ctcggctccg cccgtgtcct
     1021 cgccggtcca cggcgcgact tgcgcgtgcg cgagcccact cacgacgcac agccgatccc
     1081 tgaacggcgc gagcggcgcc aagatctcgg agagctcgaa attgcggccg gtcgcggcgg
     1141 gcgtccactt gtccatcgtc gcgccgtgcg gaatatagat gcaccccatg cggctcttcg
     1201 ggttcgcggc cgtctgcgcg agcgctgttc gcgcgggaat catcgagtcg agcaacggca
     1261 gcgcgatcgc agctccggcg ccgcggagca gcgtgcgacg agacagatgc ctcttcgtca
     1321 cgaacatcag tgcttgactc tcatctgcat cggcacactg gccacgactc cctgcacgag
     1381 cgccgaaaac cggtaatcgt ctcgcgcggc ccggcgcacg atctcgcgca cggccggcat
     1441 gtcacgggcc tcgagcgtgc ggccgatcgc atacgacaag agcttctcgg tcatcgtcgc
     1501 cacgaacagc tcgcgatgct ggagcagaac gcggcgcaag ccctccggcc ccgcgatcgc
     1561 cgtgccgtcg atgaacacgc cggccgcatc cacggctacg ccggcctcag catcccgcca
     1621 ccgcccggtg aagtcaaagt tctcgagcgc gaacccgatc gggtccatga ggtcgtggca
     1681 cgcggcgcag ccgggatcgg ccatgtgccg ctcgagccgc tgccgcatcg tcgttgcggt
     1741 cgcaccgagc ggtgccgttt cgtcgagatt cgtctcgacg ccttccggcg gcgggggcgg
     1801 gggcgtgccg agcacgttct gtaacaccca ttgcccg
//
LOCUS       DATCUD010000363         2943 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_102868, whole genome shotgun sequence.
ACCESSION   DATCUD010000363 DATCUD010000000
VERSION     DATCUD010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2943
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102868"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VIQ99_05385"
     CDS             complement(<1..646)
                     /locus_tag="VIQ99_05385"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HEY9182609.1"
                     /translation="MKRPFVVATAVLIPALAAGWWVLEHAPKRTTEALLGRYCLECHD
                     PVEQAGNLTIDPKGLATLPGDVEHWEKILRKLRARAMPPDGPRPDEASYATATAFLTA
                     ELDKIAAARPQPGSVPAFRRLTRTEYRNAIRDLLALENLPSELDFELLLPADNASSGF
                     DNIADLLFVSPVVMERYIAAAQKIARLAVGDLRAPVMVNIHRLSEQLPQDERVDG"
     gene            724..2319
                     /locus_tag="VIQ99_05390"
     CDS             724..2319
                     /locus_tag="VIQ99_05390"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182610.1"
                     /translation="MHRLRAGQVLTLMLAVAAGPASAAEEAALITAVQRLDRVAVGAL
                     LDRGADVNFAASDGMTALHWAAQGGDLALVDSLLAAGAAVDAPNRFNVRPLELASNNG
                     DAAIVRRLLQAGADPNATSREGQTALMSAALSGDVGVIEALLANGAAVDATESYRGQT
                     ALMLAAGEGNTDAVRALIERGANVTAQSKAGFTPLLFAVRNAQLDAVRVLIEHGANVN
                     DVVPRDGTSALNVAVVNAFYEVASVLVEHGADPNLPDARASPLHTIAWLRKPGATDRA
                     GGVGELATAAPRPLGTVTSLELAQQLLDHGANPNVRVDWPEIRFEALGGTTRNPPGIP
                     LGRHLLTYNGATAFYVAAKNGDAEYMRLLARNGADPSITNRFGITPLMVAAGLDTWEG
                     ETPGPHTGVSEAERLEAVKTALELGNDINAVADFGDYPMIGEPEYTLLYYPHNLKDLQ
                     DLGMGDPRWSGSTALHGSIISNQPSIVQYLVDQGADLDAKTATGWTALMMSRGVFLTN
                     TGREFPAAEAILVKALAERDARK"
     regulatory      2375..2485
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2536..>2943
                     /locus_tag="VIQ99_05395"
     CDS             2536..>2943
                     /locus_tag="VIQ99_05395"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9182611.1"
                     /translation="MIVCSRRCAVNALACSVLATIPAALLAQPPADVLEEIVVTAAFR
                     EARIEELPISVSVLDRAELATSVQQHFEEAIRQIPNLNLSGEGSRARYFQLRGVGELE
                     QYEGAPNPSVGFIVDDIDFSGLGSVATLFDVDRV"
BASE COUNT          479 a          965 c         1016 g          483 t
ORIGIN      
        1 ggccgtcgac gcgctcgtcc tggggcagct gctccgagag ccgatggatg ttgaccatga
       61 cgggcgcgcg caagtcgccg acggcaagcc gcgcgatctt ctgcgccgcc gcgatgtagc
      121 gctccatcac gaccggcgac acgaaaagca ggtccgctat gttgtcgaag ccgctgctcg
      181 cgttgtcggc cggcagtagg agctcgaagt cgagctcgct cggcagattc tcgagcgcga
      241 gcaggtcgcg gatcgcgttc cggtactcgg tgcgtgtgag ccggcggaac gccggcacgg
      301 agcccggctg cggccgcgcc gccgcgattt tgtcgagctc ggccgtaaga aacgcggttg
      361 cggtcgcgta gctggcttcg tcggggcgcg gcccatccgg cggcatcgcg cgcgcacgca
      421 gcttgcgcag tatcttctcc cagtgctcga cgtcaccggg cagcgtcgcg aggcccttcg
      481 ggtcgatcgt taggttgccg gcctgctcca cggggtcgtg gcattcgagg caataacgcc
      541 cgagcaatgc ctccgtcgtg cgcttcggcg cgtgctcgag cacccaccat ccggcggcca
      601 gcgccgggat cagaaccgcg gtagcgacga caaacggccg tttcacgggg cttgtgctcg
      661 tggtcgacgg agacccgagc attgtatatt ggccgagaca acagccgcag ggggaagact
      721 gaggtgcacc gcttacgggc cggccaggtc ttgacgctga tgctcgcggt cgctgccggg
      781 ccggcctcgg ccgccgagga agcggcgctg atcacggcgg ttcagcgcct cgaccgtgtc
      841 gccgtcgggg cattgctcga tcgcggcgca gacgtgaatt tcgccgcgag cgacggcatg
      901 acggctttgc attgggccgc ccaaggcggc gacctcgcgc tggtcgactc gttgctcgcc
      961 gcgggcgccg ccgtcgacgc cccgaaccgc ttcaatgtcc ggccgctcga gctggccagt
     1021 aacaacggcg atgccgcaat cgtcaggcga ctgctgcaag ccggagccga cccgaacgcg
     1081 acttcgcgcg aagggcaaac cgcgctgatg agcgccgcgc tctccggcga cgtcggcgtg
     1141 atcgaagcgt tgctcgcgaa cggcgccgcg gtcgacgcga ccgaaagtta ccgcggccaa
     1201 accgcgctga tgctggcggc cggcgaaggc aacacggatg cggttcgcgc gttgatcgag
     1261 cggggcgcca acgtcacggc gcaatcgaag gccggtttca cgccgttgct gttcgcggtg
     1321 cgtaacgcgc agctcgatgc ggtgcgcgtg ctgatcgagc atggtgccaa cgtcaacgac
     1381 gttgtgccgc gtgacggcac gagtgcgctg aacgtcgcgg tggtgaacgc gttctacgag
     1441 gttgcctcgg tgctcgtcga gcacggcgcg gacccgaatc ttccggatgc gcgcgcgtcg
     1501 ccgctgcaca cgatcgcgtg gctacgcaag ccaggcgcca cggacagggc cggcggcgtc
     1561 ggcgagctcg cgaccgcggc gccgcggccg ctcggtaccg tcacgagcct cgagctcgcg
     1621 cagcagctgc tggaccacgg cgcgaacccg aacgtccgcg tcgactggcc ggagatccga
     1681 ttcgaggcgc tcggcggcac gacgcggaac ccgcccggta tcccgctcgg ccggcatctc
     1741 ttgacctaca acggtgcgac ggcgttctac gtcgcggcca agaacggcga cgccgagtac
     1801 atgcggctgc tcgcgagaaa cggcgcggat ccctcgatca cgaatcgctt cgggatcacg
     1861 ccgctgatgg tcgccgcggg tctcgatacc tgggaaggcg agacgccggg cccgcacacc
     1921 ggcgtctccg aggcggagcg gctcgaggcc gtgaagaccg cgctcgagct cggcaacgac
     1981 atcaacgcgg tcgcggactt cggcgactac ccgatgatcg gcgagccgga gtacacgctg
     2041 ctgtactacc cgcacaactt gaaggacttg caggatctcg gcatgggcga tccgcgctgg
     2101 agcggcagca ccgcgctgca cgggtcgatt atttcgaatc agccgtcgat cgtgcagtac
     2161 ctcgtcgatc agggtgccga tctcgacgcg aagaccgcca cgggttggac cgcgttgatg
     2221 atgtcgcgcg gcgtatttct aacgaacacc ggccgcgagt tccctgcggc cgaagcgatt
     2281 ctcgtgaaag cgttggcgga gcgcgacgcg cgaaaatagc gttcgcagaa gcatggcttt
     2341 cgcggtgcta ccgctttgct ctatcattcg cgctgacttg accgaggggt ggccggcgac
     2401 ggcctgagag atcgacgagt gtgtcgatca accctttgaa cctgatccgg ttagtaccgg
     2461 cgaagggacg ggaatccgaa ttttccccac tcgctagata cgaacaccgg gtctcgctcg
     2521 cagaggagat ccgcgatgat tgtttgcagt cgccgttgcg ccgtcaacgc gctcgcgtgc
     2581 agcgtgctcg caaccatacc ggctgcgttg ctcgcgcaac cgccagccga tgtgctcgag
     2641 gagatcgtgg tcacggccgc gttccgcgaa gcgcggatcg aggagctgcc gatcagcgtc
     2701 agcgtgctcg atcgagccga gctcgcgacc tcggtgcagc agcacttcga agaagcgatt
     2761 cggcagattc cgaacctgaa cttgtcgggc gagggctccc gcgcgcgcta cttccagctg
     2821 cgcggcgtcg gcgagctcga gcagtacgag ggcgcgccga atccttccgt cggtttcatc
     2881 gtcgacgaca tcgacttctc ggggctcggt agcgtcgcca cgttgttcga tgtcgaccgc
     2941 gtc
//
LOCUS       DATCUD010000364         2053 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_24958, whole genome shotgun sequence.
ACCESSION   DATCUD010000364 DATCUD010000000
VERSION     DATCUD010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2053)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2053)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2053
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24958"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2053
                     /gene="uvrA"
                     /locus_tag="VIQ99_05400"
     CDS             <1..>2053
                     /gene="uvrA"
                     /locus_tag="VIQ99_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016517440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEY9182612.1"
                     /translation="GFLRARIDGEVVELDDPPKLDKRVKHDIEVVIDRFSVKPDMQLR
                     LAESFETALGMADGVALIAFMDQPKRAPLAFSNKFACPICGYSIPELEPRLFSFNNPQ
                     GACADCDGLGVRMFFDAARVVTNPTLSLAGGAIRGWDHHNSFYFMMIQALAKHYKFDV
                     QKPWNELPEKIRQMVLYGNDGELIQFKYENKKKGNKWAWKHKFEGIIPNMQRRYAETE
                     SGAVRDELMKYQSTQACATCKGTRLNAAARNVFVQERALHEITGLSVASALEFFGSLS
                     LAGWRGEIADKIVKEIHNRLKFLANVGLSYLSLDRSADTLSGGEAQRIRLASQIGSGL
                     VGVMYILDEPSIGLHQRDNQRLLDTLMNLRNLGNTVLVVEHDQEAIMAADYVVDLGPG
                     AGVHGGQVVAAGTPTEILANSASLTGQYLSGKREIPLPPQRRAFDAQLVLEIKGARGN
                     NLKGVDVQIPVGLMTCVTGVSGSGKSTLVNDTLYRLAAKHINGGGDDPAPYDKVKGLE
                     HFDYVIDISQDPIGRTPRSNPATYSGVLTPIRELFAQVPESRARGYEPGRFSFNVKGG
                     RCETCEGDGVIKVEMHFLPDVYVPCDTCAGKRYNRETLDIRYKGKNISEVLKLTVEDA
                     LALFRNVPMVAHKLETLMAVGLGYIELGQNATTLSGGEAQRVKLAKELSKRATGSTLY
                     VL"
BASE COUNT          390 a          664 c          683 g          316 t
ORIGIN      
        1 gggcttcttg agagcgcgca tcgacggcga ggtcgtggag ctcgacgacc cgccgaagct
       61 cgacaagcgc gtgaagcacg acatcgaggt cgtgatcgac cgcttctccg tgaaaccgga
      121 catgcagctg cggctcgccg agagcttcga gaccgcgctc ggcatggccg acggcgtcgc
      181 gttgatcgcg ttcatggatc agccgaagag ggcgccgctc gcgttctcga acaagttcgc
      241 gtgtccgatc tgcggctaca gcattccgga gctcgagccg cgcctgttct cgttcaacaa
      301 cccgcaaggc gcgtgcgcgg actgcgacgg cctcggcgtg cggatgttct tcgacgccgc
      361 gcgcgtcgtc acgaacccga cgttgtcgct cgcgggcggc gcgatccgcg gttgggatca
      421 tcacaactcg ttctacttca tgatgatcca ggcgctcgcg aagcactaca agttcgacgt
      481 gcagaagccg tggaacgagc tgcccgagaa gatccggcag atggtcctgt atggcaacga
      541 cggcgagctg atccagttca agtacgagaa caagaagaaa ggcaacaaat gggcgtggaa
      601 gcacaagttc gagggcatca tcccgaacat gcagcgccgt tacgccgaga ccgagagcgg
      661 cgccgtgcgc gacgagctca tgaagtacca gagcacgcag gcgtgcgcga cgtgcaaagg
      721 cacgcgcttg aacgcggccg cgcgcaacgt gttcgtgcag gaacgcgcgc tgcacgagat
      781 cacgggcttg agcgtcgcga gtgctctcga gttcttcggt agcctgagcc tcgcgggctg
      841 gcgcggtgag atcgcggaca agatcgttaa ggagatccac aatcgcctga agttcctcgc
      901 gaacgtgggg ctcagctacc tgtcgctgga ccgctccgcg gacacgctgt ccggcggcga
      961 ggcgcagcgg attcggctcg cgagccagat cggctcgggg ctcgtcggcg tcatgtacat
     1021 cttggacgag ccgtcgatcg gcctgcatca gcgcgacaac cagcgcctgc tcgacacgct
     1081 gatgaacctg cgcaacctgg gcaacaccgt gctggtcgtc gagcacgacc aggaagcgat
     1141 catggccgcc gactacgtcg tcgatttggg ccccggcgcc ggcgtgcacg gcggccaggt
     1201 cgtcgcggcc ggcactccga cggagatctt ggcgaactcg gcgtcgctga cggggcaata
     1261 cttgtcgggc aaacgcgaaa tcccgctgcc gccacagcgc cgcgcattcg acgcgcagct
     1321 cgtgctcgag atcaaaggcg cgcgcggcaa caacctgaaa ggcgtcgacg tgcagattcc
     1381 cgtcggcctc atgacgtgcg tgaccggcgt cagcggctcc ggcaagagca cgctcgtgaa
     1441 cgacacgctt taccggctcg cggcgaagca catcaacggc ggcggcgacg accccgcgcc
     1501 gtacgacaag gtgaagggcc tcgagcactt cgactacgtg atcgacatct cgcaggaccc
     1561 gatcggccgc acgccgcggt cgaaccccgc cacgtacagc ggcgtgctga cgccgatccg
     1621 cgagctgttc gcgcaggtgc ccgaatcccg cgcgcgcggc tacgagcccg gccgcttcag
     1681 cttcaacgtg aaaggcggcc gctgcgagac gtgcgagggc gacggcgtca tcaaggtcga
     1741 gatgcacttc ctgcccgatg tctacgtgcc gtgcgacacc tgcgccggca agcgctacaa
     1801 ccgcgaaacg ctcgacatcc gctacaaggg caagaacatc tccgaggtct tgaagctcac
     1861 ggtcgaggac gctttggcgt tgttccgcaa cgtgccgatg gtcgcgcaca agctcgagac
     1921 gctgatggcc gtgggcttgg gctacatcga gctcgggcag aacgcgacga cgctgtcggg
     1981 cggcgaggcc cagcgcgtga agctcgcgaa ggagctgtcg aagcgcgcga ccggctccac
     2041 gctctacgtg ctc
//
LOCUS       DATCUD010000365         1625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_95988, whole genome shotgun sequence.
ACCESSION   DATCUD010000365 DATCUD010000000
VERSION     DATCUD010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95988"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="VIQ99_05405"
     CDS             complement(<1..331)
                     /locus_tag="VIQ99_05405"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY9182613.1"
                     /translation="MNLTRLAPEHDAAAGRAGIVVPPPVIYLGVLGLGLLLEWLWPTR
                     LLSRPMAVAVGSTILACGVVGLTAAIRALWRARTPVNPYKATTAIVTDGLFRVSRNPI
                     YVSDTLLY"
     gene            complement(354..830)
                     /locus_tag="VIQ99_05410"
     CDS             complement(354..830)
                     /locus_tag="VIQ99_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015766345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182614.1"
                     /translation="MKSRLIAIAALAAATAFVPAVTLAAGDSDSAPAATVADADFEAG
                     KAAIRSQNWSAAIGHFSKVVARDPQNAGAQNWLGYANRKSGNLDLAFKHYDEALRLDP
                     KHRGAHEYIGEAYLMKGDVAKAKEHLATLDRICFFGCEEYSDLKKAIAQYEQRTMR"
     gene            complement(861..>1625)
                     /locus_tag="VIQ99_05415"
     CDS             complement(861..>1625)
                     /locus_tag="VIQ99_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEY9182615.1"
                     /translation="DFFNGGDGTDFAFMGAGDDTFVWNPGDDNDTLEGQAGFDTLLFN
                     GANVAEEINILANGERALFTRNIASVTMDLDDVERIDFNALGGADVVAVHDLSGTDVT
                     EVNVNLAATLDGETGDGAVDQIIVNGTDGDDVFILSLQDGALVIQGLASEIVIENFDL
                     TDHIVINGLAGDDVVEASGVGPGGPLLTLNGGDGDDVLIGGDGNDVINGGAGDDVLLG
                     GNGIDVLDGGDGDDIEIQLATGVSEPSLQAEYPLLA"
BASE COUNT          264 a          518 c          542 g          301 t
ORIGIN      
        1 catagaggag cgtatctgaa acgtagatcg gattgcgcga gacacgaaaa aggccatccg
       61 tcacgatcgc ggtcgtggct ttgtagggat tgaccggtgt tctcgcgcgc caaagggcgc
      121 gaatcgcggc ggtcaatccg accacgccac aagcgaggat cgttgacccg acggccacgg
      181 ccataggccg gctcagcagc cgagttggcc aaagccactc aagcagcagg ccgaggccaa
      241 gaaccccgag gtagatcacc ggaggcggaa cgacgattcc cgctctgccc gccgcagcgt
      301 cgtgctcggg agcaagccgt gtcagattca ccgcgaaatg ggtgagacca aaattacctc
      361 atcgtcctct gctcgtactg ggcgatcgcc ttcttgaggt cgctgtactc ctcgcagccg
      421 aagaagcaga tccgatcgag cgtcgccaag tgctccttcg ctttcgcgac gtcgcccttc
      481 atcaggtagg cctcgccgat gtactcgtgc gcgccgcgat gcttgggatc gagcctgagg
      541 gcctcgtcat agtgcttgaa ggccaggtcc aggttgcccg acttgcggtt ggcgtagccg
      601 agccagttct gcgcgccggc gttctgcgga tcgcgggcga cgaccttgct gaaatggccg
      661 atcgccgcgc tccagttctg gctcctgatc gccgccttgc cggcctcgaa atccgcgtcg
      721 gccacggtgg ccgcgggcgc ggagtcggaa tcgccggcgg ccagggtgac cgccggaacg
      781 aacgcggttg cggcggcgag cgccgcgatc gcaatgagcc tgcttttcat gtgcacttcc
      841 tttcagggtt gaattcattc ttacgcaagc agggggtact ccgcctgcag tgacggctcg
      901 ctgacgcccg tcgcgagctg gatctcgatg tcgtcgccgt cgccgccgtc gagcacgtcg
      961 atgccgttgc cgccgagcag cacgtcgtcg ccggcgccgc cgttgatgac gtcgttgccg
     1021 tcgccgccga tgagaacgtc gtcgccgtcg ccgccgttga gcgtcagcag cggcccgccg
     1081 gggcccaccc ccgacgcttc gacgacgtcg tcgcccgcga ggccattgat cacgatgtgg
     1141 tcggtgagat cgaagttctc gatcacgatc tccgaggcaa gcccctggat caccagcgct
     1201 ccgtcctgca gcgacagaat gaagacgtcg tcgccgtcgg tgccgttgac gatgatctgg
     1261 tccactgcgc catcgccggt ttcgccgtcg agggtggcgg cgaggttgac gttgacttcg
     1321 gtgacgtcgg taccgctgag atcatgcacg gcgacgacgt cggcgccgcc gagggcgttg
     1381 aagtcgatgc gctcgacgtc gtcgaggtcc atggtgacgc tggcgatgtt gcgggtgaac
     1441 agggcgcgct cgccgttcgc caggatgttg atttcctcgg ccacgttggc gccgttgaag
     1501 agcagggtgt cgaagcccgc ctggccttcc agcgtgtcgt tgtcgtcgcc ggggttccag
     1561 acgaaggtgt cgtcgcccgc gcccatgaag gcgaagtcgg tgccgtcgcc gccgttgaag
     1621 aagtc
//
LOCUS       DATCUD010000366         3661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81682, whole genome shotgun sequence.
ACCESSION   DATCUD010000366 DATCUD010000000
VERSION     DATCUD010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3661
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81682"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..478)
                     /gene="greB"
                     /locus_tag="VIQ99_05420"
     CDS             complement(<1..478)
                     /gene="greB"
                     /locus_tag="VIQ99_05420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019339450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEY9182616.1"
                     /translation="MGRYRLPRPESAKYITPEGAARLRRELDELWRVKRPAVTKAVAE
                     AAAQGDRSENAEYIYGKKQLAEIDRRVRFLRKRLTGIRVVDQAPSDTGKVFFGAWFVL
                     VGDAGERKEYRLVGPDEFDFAPEYISVDSPLGRAVLGKGLGATVAVRTPEGTRRYEL"
     gene            543..1529
                     /gene="lipA"
                     /locus_tag="VIQ99_05425"
     CDS             543..1529
                     /gene="lipA"
                     /locus_tag="VIQ99_05425"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011785836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEY9182617.1"
                     /translation="MNEFRGIRVVTTGSKYQTEQGFAAIKNGVKAREDRQQARREPKP
                     PWLRARIPAGERFEKLRSTVHEHRLATVCEESMCPNIGECWNNGTATIMLMGKVCTRA
                     CQFCAVDTGNPHGWLDPDEVANCARTVQLMNLDYVVLTSVDRDDLPDGGARHYADCIR
                     AIKAACPDTAVEALTPDFAGNLADVSTVLDSGLDVFAQNIETVERLTSRVRDARAGYE
                     QTLHVLAHAKRHCPDVLTKSSLMLGLGETEDEIAATLDNLQRAAVDIVTFGQYLRPTM
                     NHLAVERYVTPEEFDTYRQWGLKRGFLEVVAGPLVRSSYRAERVFEKNNVGL"
     gene            1535..2518
                     /gene="sohB"
                     /locus_tag="VIQ99_05430"
     CDS             1535..2518
                     /gene="sohB"
                     /locus_tag="VIQ99_05430"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEY9182618.1"
                     /translation="MSEFLASYGLFLAQLATFVVIVIVAIALIAASRRRGRGEGLVVE
                     HLNRRYEEAADELKLAVEGKERFKKSAKARHKELKREDKARAKQESKKARLFVLDFKG
                     DIRASAAASLREEVSAVLHVARPKDKVLVRLENSGGTVHEHGFAASQLLRLKKHGLEL
                     LVAVDKVAASGGYLMACVADRLIAAPFAIIGSIGVLAQLPNFHRMLEEKGVDFEQITA
                     GRYKRTLTLFGKNTDEGRAKLKEEVEDVHELFKQQIREYRPQVDLERVATGEHWYGIR
                     ALDLKLVDELKTSDDFLLEAAKDHDLYHVVYKRRRGWQERVLGGVESLLTR"
     gene            2599..3210
                     /locus_tag="VIQ99_05435"
     CDS             2599..3210
                     /locus_tag="VIQ99_05435"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY9182619.1"
                     /translation="MRMNGISFARRAAAVLLFLGSGTTAAQADDAAGGARVPVEDRWP
                     AGLSRQDVRLGSIDADHDDDYLYRLPYADDASFPIIQAYSAKLSHRGPEQFTLDFGMP
                     IGTPVHAARDGVVVLHSDGTTGEYFHLAQGSARVELGERVRRGQVLALSGNTGYSTAP
                     HLHFGVYRTARDRGTESLGVRFLTRGGPVSAPRSGARYLNALE"
     gene            3259..>3661
                     /locus_tag="VIQ99_05440"
     CDS             3259..>3661
                     /locus_tag="VIQ99_05440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182620.1"
                     /translation="MDRSNRLGALVRPVQLFAVTLLLGGCSFLMTPQKAEGPPAQAAV
                     PNDPDPAAPRLAPLDTRHFELAPGQEVIGATQVIFARHENTFSTIGREYNLGYEELRR
                     ANPGVDQWLPGEGTPLYLPTQTILPDAPHSGI"
BASE COUNT          644 a         1194 c         1219 g          604 t
ORIGIN      
        1 caagctcgta gcggcgagtg ccttcgggcg tccgcacggc gaccgtcgcg ccgagcccct
       61 tgccgaggac ggcacggccg agcggggagt cgacactgat gtactcgggt gcgaagtcga
      121 actcgtcggg gccgacgagc cgatactcct tgcgttcacc ggcgtcgccg accagcacga
      181 accatgcgcc gaagaacacc ttgccggtgt cgctcggcgc ctgatcgacg acgcgaattc
      241 cggtcaggcg cttcctcagg aagcgcacgc gtcgatcgat ctcggcgagc tgcttcttgc
      301 cgtagatgta ctcggcgttc tcggaacgat cgccttgcgc agcggcttcg gccacggcct
      361 tcgtaaccgc gggtcgcttg actcgccaca gctcgtcgag ctcgcgccgc agtcgggcag
      421 cgccttccgg cgtgatgtat ttcgcgctct ccgggcgcgg cagtcgataa cgacccataa
      481 ccccccgaca gccggctttg tgcgatactc gccggcactc cccgcgcatg ttagcagtca
      541 cgatgaacga gtttcgcggc atccgcgtcg tcaccaccgg ctcgaaatat cagaccgagc
      601 agggattcgc cgcgatcaag aacggcgtga aggcgcgtga ggatcgacag caagcgcggc
      661 gcgagccaaa gccgccgtgg ttgagggcac gcattcctgc aggcgaacgt ttcgaaaaat
      721 tgcgctcgac cgttcacgag catcgcctcg cgaccgtttg cgaggagtcg atgtgcccga
      781 acatcggcga gtgctggaac aacggcacgg cgacgatcat gttgatgggc aaggtatgca
      841 cgcgcgcgtg tcagttctgc gccgtcgata ccggcaaccc gcacggctgg ctcgacccgg
      901 acgaggtcgc gaactgcgcg cgtaccgtgc agctcatgaa cctcgattac gtcgtgctga
      961 cttcggtcga tcgcgatgat ctaccggacg gcggcgctcg tcactacgcg gattgcatcc
     1021 gcgcgatcaa agccgcatgt cccgacacgg ctgtcgaagc gttgactccg gatttcgccg
     1081 gcaacctcgc cgacgtctcg acggtgctcg actccggcct cgacgtgttc gcgcaaaata
     1141 tcgagacggt cgagcgactc acgagccgcg tccgcgacgc gcgtgccggc tacgagcaga
     1201 cgcttcacgt gctcgcgcac gcgaagcgtc attgtcccga cgtgctcacg aaatcgagcc
     1261 tgatgctcgg cctcggcgaa accgaggacg agatagccgc gacactcgac aatttgcagc
     1321 gagccgccgt cgacatcgtg acgttcggcc agtacctgcg gccgacgatg aatcacctgg
     1381 ccgtcgagcg ctacgtgacg ccggaggagt tcgacacgta ccggcagtgg ggcttgaagc
     1441 gtggtttcct cgaggtcgtc gcagggccgc tcgtgcgctc gagctaccgc gcagagcgcg
     1501 tgttcgagaa gaacaacgta gggctctaga gcgcgtgagc gagtttctcg cgtcatacgg
     1561 cttgttcctg gcgcagctcg cgacgttcgt cgtgatcgtg atcgttgcga tcgctctgat
     1621 cgcggcgagc cgccgtcgcg gccgtggcga agggctcgtc gtcgagcact tgaaccgccg
     1681 ctacgaggaa gccgccgacg agctcaagct cgcggtcgaa ggcaaagagc ggttcaagaa
     1741 atcggcgaaa gcgcgccaca aggagctgaa gcgcgaggac aaggcgcgcg cgaagcagga
     1801 gagcaaaaag gcgcgcttgt tcgtgctcga tttcaagggc gacatccgcg cgagcgccgc
     1861 cgcgtcgttg cgcgaggagg tctcggccgt cctgcacgtc gctagaccca aggacaaggt
     1921 cctggtccgg ctcgagaact cgggcgggac cgtgcacgag cacggtttcg cggcgtcgca
     1981 gctactcagg ttgaagaagc acggcctcga gctgctcgtg gccgtggaca aggtcgccgc
     2041 gagcggtggt tatctgatgg cgtgcgtggc cgaccggctg attgcggcgc cgtttgcgat
     2101 catcggctcg atcggcgtgc tcgcgcagct gccgaacttc catcgcatgc tcgaggagaa
     2161 gggcgtcgat ttcgagcaga tcacggcggg ccgctacaag cgcacgctca cgctgttcgg
     2221 caagaatacg gacgagggcc gcgcgaagct caaggaagaa gtcgaggacg tgcacgagct
     2281 gttcaagcag cagattcgcg agtatcggcc gcaggtcgac ctcgagcgcg tcgcgaccgg
     2341 cgagcattgg tacggcattc gcgcactcga tctcaagctc gtggacgagc tgaaaaccag
     2401 cgacgacttc ctgctcgagg ccgccaaaga tcacgacctc tatcacgtcg tgtacaagcg
     2461 ccggcgcggc tggcaagagc gcgtgctcgg cggcgtcgaa agcctgctga cgcgctgacg
     2521 caccttatgt agaagctcgt cccctcgcgc gggtgcgctg gggcatactt cgtctcgcat
     2581 ccgctaacaa caacaacgat gaggatgaac ggaatctcct tcgctcggcg tgccgccgcg
     2641 gttctcctat tcctggggag tggcacgacg gcggcgcaag ccgacgatgc ggcgggtggt
     2701 gcgcgtgtgc cggtcgagga tcgctggccg gccggactca gccggcagga cgtgcgcttg
     2761 ggcagcatcg acgccgacca cgacgacgac tatctgtatc gtttgccgta cgccgacgac
     2821 gcgagctttc cgatcatcca agcgtattcc gcgaagctga gccaccgtgg gcccgagcag
     2881 ttcacgctgg acttcggcat gccgatcggc acgcccgtgc atgccgcgcg cgacggcgtc
     2941 gtcgtgctgc actcggacgg caccaccggc gagtatttcc atctcgcgca aggcagcgcg
     3001 cgcgtcgagc tcggcgagcg cgtgcggcgc gggcaggtgc ttgcgctctc gggcaacacg
     3061 ggctacagca ccgcgccgca tctgcacttc ggtgtctacc gcacggcgcg ggatcgcggc
     3121 accgagtcgc tcggcgtccg gtttctgacg cggggcggtc ccgtcagcgc cccgcgcagc
     3181 ggcgcgcgct atttgaacgc gctcgaatag cgccgttagg tatactccgc cgaggacatc
     3241 gcggagccgt cggcaatcat ggatcgatcg aatcgtctcg gggcgctcgt tcgcccggtg
     3301 caactgttcg cggtcacgct cctgctcggt ggctgcagct tcctgatgac gccgcaaaag
     3361 gccgaagggc cgccggccca agcggccgtg ccgaacgatc cggatcccgc ggcgccgcgg
     3421 ctcgcaccgc tcgacacgcg gcacttcgag ctcgcgcccg gtcaggaggt gatcggcgcg
     3481 acgcaggtga tcttcgcgcg tcacgagaac acgttttcga cgatcgggcg cgagtacaac
     3541 ttgggctacg aagagctacg ccgcgcgaat cccggcgtcg atcagtggct ccccggcgag
     3601 ggcacgccgc tgtacctgcc gacccagacg atcctgcccg acgcgccgca cagcggcatc
     3661 g
//
LOCUS       DATCUD010000367         2284 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60149, whole genome shotgun sequence.
ACCESSION   DATCUD010000367 DATCUD010000000
VERSION     DATCUD010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60149"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..301
                     /locus_tag="VIQ99_05445"
     CDS             <1..301
                     /locus_tag="VIQ99_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182621.1"
                     /translation="PQNGLPGNVGFLQAKPPSYLDVASGMQVAWVDVADPQNPVGAKG
                     IGEPVQGCAAAALLCAISDALGGHYFNRTPVMPDMIVNAAAGRPQSHKALQVNTA"
     gene            416..1081
                     /locus_tag="VIQ99_05450"
     CDS             416..1081
                     /locus_tag="VIQ99_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020881064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY9182622.1"
                     /translation="MADNTNGRGYPEPRFDQFVSKATSRRQFIKGVIASGAAVSGAGY
                     LFSISGCSREQGSAGGVERLLTLNVNGQMRPVDVLPNETLAMTLRYKLGLTGTKLGCD
                     RGECGACTVLVDGVTNYSCSTLTHTVRGRAITTIEGLEGPNGELHKVQQAMIDELGPQ
                     CGFCTPGQIMSAVALLNENPTPTRDEVRHALSGNLCRCGAYDHYLNAVMRAAGNGERL
                     SQA"
     gene            1101..2105
                     /locus_tag="VIQ99_05455"
     CDS             1101..2105
                     /locus_tag="VIQ99_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009179498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY9182623.1"
                     /translation="MSRDMMSAFELYQPDTVEGAVELLGRFGAEGWALAGGNDSFDWF
                     KDRVKRPKYVVDLSGIAALRGIRETPDGGVEIGALTTLTEIERNATIQGRYKVLADAA
                     RRVASPQIRNSGTLGGNVVQDARCWYYRYGVDCYRAGGNTCYADTPEGQNREHCLWGA
                     DRCVAVSPSDTAPALVALDATMVILGPQGSRDVKAEEFFIGPNIDIERMTVLEPGDVL
                     TAIRLPAEWSGARFYFEKVADRNTWDFPLVNIAAAMKVSGAAGSETVDAIRIVAGAVQ
                     CVPRRLTVVEQVVTGQAKNAATASLAGQSAVRGATPLNFNHFKIPLLQNLVTRAIRDA
                     "
BASE COUNT          394 a          715 c          814 g          361 t
ORIGIN      
        1 cccgcagaac ggcttgcccg gcaacgtcgg gttcctgcag gcgaagccgc cgtcgtacct
       61 ggacgtggct tcgggcatgc aggtcgcctg ggtcgacgtc gcggatcctc agaacccggt
      121 cggtgcgaag ggaattggcg agccggtcca gggctgcgcg gccgccgcat tgctgtgcgc
      181 gatctcggac gctctcggcg gacattactt caatcgcacg ccggtgatgc cggacatgat
      241 cgtgaacgcc gcggcgggcc ggccgcagtc gcacaaagcg ctgcaggtca acacggcatg
      301 agcatggacg gccccagcga cgacccggtc cggcgcctgt tgagcggtgc cggcttttca
      361 cctagcatcc aatcgattcg atgcgtcttc ggcgcttcag gaggggaaaa tcctcatggc
      421 tgacaacacc aacgggcgcg gttacccgga gccgcgattc gatcaattcg tttccaaggc
      481 cacgtcgagg cgccagttca tcaaaggcgt catagcctcg ggcgccgcgg tgtcgggcgc
      541 gggctacctg ttttcgatca gcggctgctc cagagagcag ggttccgccg gcggcgtcga
      601 gcgcctgctc acgctgaacg tgaacggcca gatgcgcccg gtcgacgttc tgccgaacga
      661 aacgctcgcg atgacgctgc gctacaagct cggcttgacg ggcacgaagc tcggctgcga
      721 tcgcggcgag tgcggcgcct gcacggtgct cgtcgacggg gtcacgaact actcgtgctc
      781 gacgctcacg cacacggtgc gcggtcgtgc gatcacgacg atcgaaggcc tcgaagggcc
      841 gaacggcgag ctgcacaaag tccagcaggc gatgatcgac gagctcggcc cgcaatgcgg
      901 cttctgcacg ccgggacaga tcatgtcggc ggtcgcgttg ctgaacgaga atccgacgcc
      961 gacgcgcgac gaggtacgcc acgcattgtc gggcaacctc tgccgctgcg gcgcgtacga
     1021 tcattacctg aacgcggtca tgcgcgcggc cggcaacggc gagcgcttga gccaggccta
     1081 aaccagaagg agctttggca atgtccagag acatgatgag cgcattcgag ctctaccagc
     1141 cggacacggt ggaaggcgcg gtggagctct tggggcgatt cggcgccgaa gggtgggcac
     1201 tggcgggcgg caacgacagc ttcgactggt tcaaggaccg ggtgaagcgg ccgaagtacg
     1261 tcgtggatct gagcgggatc gcggcgctgc gcggcatccg cgagacgccg gatggcggcg
     1321 tcgagatcgg cgcgctgacg acgctgacgg aaatcgagcg caacgcgacg attcagggcc
     1381 ggtacaaagt gctcgcggat gcggcgcgcc gagtcgcgag cccgcagatt cgaaattcgg
     1441 gcacgctcgg cggcaacgtc gtccaggacg cgcgctgctg gtactaccgc tacggcgtcg
     1501 actgctatcg agccggcggc aatacctgct acgcggacac gccggaaggc cagaatcgcg
     1561 agcactgttt gtggggtgcc gaccgctgcg tggccgtgag cccgtcggac acggctccgg
     1621 ccctcgtggc gctcgacgcg acgatggtga tcttgggacc gcaaggctcg cgcgacgtga
     1681 aggccgagga gttcttcatc gggcccaaca tcgacatcga gcggatgacc gtgctcgagc
     1741 ccggcgacgt gctgacggcc atccgtctgc ccgcggagtg gagcggtgcg cggttctact
     1801 tcgagaaggt cgcggaccgg aacacgtggg acttcccgct cgtgaacatc gcggccgcga
     1861 tgaaggtaag cggagcggcg gggtccgaga ccgtcgacgc gatccggatc gtagcgggtg
     1921 cggtgcagtg cgtgccgcgg cggctcacgg tggtggagca ggtcgtgacg ggtcaggcca
     1981 agaacgccgc gacggcgtcg ctggccggcc agagcgccgt gcggggcgcc acgccgctga
     2041 acttcaacca cttcaagatc ccgctgctgc agaacctcgt cacgcgcgcg atccgcgacg
     2101 cctgatcggc gcgcgcaagc gcgagcgagt agcgcgtgga gttgtttcgt gtcagccgcg
     2161 acatctacgg ccgcgaagtg ctgcaaggca tgtcgtggga cctgctgtgg gtgtttttcg
     2221 gtctcggctg cgtgctgatc gtcggccacg tcgcataccg gtggctgctc gcacctaggc
     2281 gaca
//
LOCUS       DATCUD010000368         1815 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17894, whole genome shotgun sequence.
ACCESSION   DATCUD010000368 DATCUD010000000
VERSION     DATCUD010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17894"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..520)
                     /locus_tag="VIQ99_05460"
     CDS             complement(74..520)
                     /locus_tag="VIQ99_05460"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EthD family reductase"
                     /protein_id="HEY9182624.1"
                     /translation="MNDQHPDHIDRRSMLVGAGTAAAAGVVAAFGSEPAQAQGKVDQE
                     CMTIVYQSGPDVRFDFSYYINTHMPRIMNLYGKSISRFELRRGQPGADGAAPPYVATI
                     TIWIADGAAFDAAQAQHQAGLRADVPKFTNATLIAQRDRIVGTATS"
     gene            complement(558..1232)
                     /locus_tag="VIQ99_05465"
     CDS             complement(558..1232)
                     /locus_tag="VIQ99_05465"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEY9182625.1"
                     /translation="MRADRSVAIELAAIGAAAVIFVATFQVRPAYLDFVLAAAAVALI
                     VFSAARSRGLWALARSVDPTGARGAWIATLAFTAVALVALATAAVFTARAAEVPLTER
                     FGNWHMLAAAALYLPWALLQQYIFQFYWFGRWLCLASVPVAVALTALAFAAVHFPRWP
                     VMAVTLVAGTAWAVIYYRWRSLVPLAVSHALLGTALHYWVFGNDLLERWLPWATGIVQ
                     RLRVML"
     gene            complement(1251..>1815)
                     /locus_tag="VIQ99_05470"
     CDS             complement(1251..>1815)
                     /locus_tag="VIQ99_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014033268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY9182626.1"
                     /translation="VLKERILDPLGMRDTEFYLSPGKENRLTAVYSQNAGKLERAPTP
                     GNAVGQGHYVDGPRRNFSGGAGLLSTATDYARFLQMMLNGGTLDGRRILSRKTVELMT
                     TSHLGDIAFNPGQGFGLGFYVVEDVGARGSAGSAGEFGWGGAYHTTYWVDPREELVVV
                     HLTQLVPAGTVDDQAKVRALVYQAIVD"
BASE COUNT          325 a          590 c          622 g          278 t
ORIGIN      
        1 tgctcagttc ggctgcggca agcggagaac cgccgcaact tgtgcggcgg ttctcgcaag
       61 cgacgaggaa aggctacgac gtggcagtgc cgacgatgcg gtcgcgctgc gcgatcagcg
      121 tcgcgttagt gaacttcggc acgtccgcgc gcaagccagc ttgatgttgg gcctgggcgg
      181 cgtcgaacgc ggcgccatcc gcaatccaaa tcgtgatcgt ggcgacatac ggcggcgcgg
      241 cgccgtcggc gccgggctgg ccgcgacgca gctcgaagcg gctgatcgac ttgccgtaca
      301 gattcatgat ccgcggcatg tgcgtgttga tgtagtagct gaaatcgaag cgcacgtcgg
      361 gcccgctctg atacacgatc gtcatgcact cctggtcgac tttgccttgc gcttgcgccg
      421 gctcggagcc gaacgcggcg acgacgccgg ctgctgcggc ggtgccggca ccgaccagca
      481 tggagcggcg atcgatgtgg tctggatgtt ggtcgttcat gagtgcaccc ccgtgcgccg
      541 agtcggaact tcggctacta gagcatgacc cgcagccgtt gcacaatccc ggttgcccag
      601 ggtagccagc gttcgagcag atcgttgccg aatacccagt agtgcagcgc tgtgccgagc
      661 agtgcgtgcg acaccgcgag cggaaccagg cttcgccaac gatagtagat gaccgcccac
      721 gccgtgccgg ccacgagcgt caccgccatg acgggccagc gcgggaaatg cacggccgcg
      781 aacgcgagcg ccgttagggc tacagcgact ggcacggacg cgaggcacag ccagcgaccg
      841 aaccagtaga actgaaagat gtattgctgc agcagcgccc aaggcagata cagagcggcc
      901 gccgccagca tatgccagtt gccgaaacgc tcggtgagtg gcacttctgc tgcacgcgcc
      961 gtgaataccg ctgccgtcgc caatgcaacg agtgccacgg ccgtgaaggc gagcgtggca
     1021 atccaggcgc cgcgcgcgcc ggtcggatcg acgctgcgcg cgagcgccca caggccccga
     1081 ctgcgagccg cgctgaagac gatcagcgcg acggccgcgg cggcgagcac gaagtcgaga
     1141 taggcgggcc gaacctggaa cgtcgcgacg aagatgaccg cggccgcgcc gatggcggcg
     1201 agctcgatag cgacggatcg gtcggcgcgc atcgggtctg cgcgccgtgc tcagtcgacg
     1261 atcgcttgat agacgagcgc gcggaccttg gcttgatcgt cgacggtgcc ggccggcacg
     1321 agctgcgtga ggtgcaccac cacgagctct tcgcgcggat cgacccaata cgtcgtgtga
     1381 tacgcgccgc cccagccgaa ctcgccggcg gatcccgcgg agccgcgtgc gccgacgtcc
     1441 tcgacgacgt agaacccgag gccgaagccc tggccgggat tgaacgcgat gtcgccgaga
     1501 tggctcgtcg tcatgagctc gacggtttta cggctcaaga tgcgccggcc gtcgagcgtg
     1561 ccgccgttca acatcatctg caggaaccgc gcatagtcgg tcgccgtcga cagtagcccc
     1621 gcgccgccgg agaaattcct gcgcgggccg tcgacgtagt gaccctgtcc cacggcattc
     1681 ccaggcgtcg gcgctcgctc gagcttgccg gcgttctgcg agtacacggc cgtgaggcgg
     1741 ttctctttac cgggcgacag atagaactcg gtgtcgcgca tgccgagcgg gtcgagaatg
     1801 cgctccttca agacc
//
LOCUS       DATCUD010000369         1837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67663, whole genome shotgun sequence.
ACCESSION   DATCUD010000369 DATCUD010000000
VERSION     DATCUD010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1837
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67663"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1837)
                     /locus_tag="VIQ99_05475"
     CDS             complement(<1..>1837)
                     /locus_tag="VIQ99_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182627.1"
                     /translation="QGPTNVALPPPNVVVPGELYIEPATLINLGFEWLIQGDDNRNAR
                     VAVTFRARGEDAWRDALPLLRLQGERIYAESRIDVVAPNMFAGSVLDLTPDTPYEVRF
                     VMSDPDGVVGTAERTVVVRTRAEPTRSANGRVFHVYPHGFAGQKIEPSFEGLMCAYNE
                     WCAGTDWATAGRPRVRPGDTIVVHAGLYKYNRYEYTNDPTVNRTTPLDGTYYLTADGT
                     AEMPIAIVAAGDGDVVFDGDGNYALFDVRAADHTYFEGITFRNAEIAILAGTQFIAGS
                     KGLTVKRSRFENVGAGVFTNWSGSSGFYIADSVFMGRNDPNHVIGWAGEMWRKFDGVE
                     GQTFPPAMASYVAVKLYGPGHVVAHNYIADFHDGINVETYGNPDGSVASGPGIADGPK
                     YPPREYWDLRPVAIDFYGNYITNSHDNPIETDGSMHNIRVLRNLFINHASHAFCNQPT
                     LGGPVYWIRNIAYHLPAGSTRLTAGAAGVLFYNNTILSETLAAGTSNTHWRNNLMLGE
                     NAAPAIFNVSTFTQYTSSDFNGFRPNADVAASFRWAAPPAGTVADYNRLGHTAALEAR
                     EFATLAEFAAATGQDRNSVLVDYDVFVNVPRLDAQDTATVQKIYDA"
BASE COUNT          284 a          596 c          625 g          332 t
ORIGIN      
        1 gcgtcgtaga tcttctgcac cgtcgcggtg tcctgcgcat cgagccgcgg cacattcacg
       61 aacacgtcgt agtcgacgag cacgctgttg cgatcctggc ccgtcgcggc cgcgaactcg
      121 gccagcgtcg cgaactcgcg cgcttcgagc gcggccgtgt ggccgagcct gttgtagtcg
      181 gcaactgtgc ccgcgggcgg cgcggcccag cggaacgatg cggcgacatc tgcgttcggc
      241 ctgaacccgt tgaagtccga cgacgtgtac tgcgtgaacg tcgagacgtt gaagatcgcg
      301 ggtgctgcgt tctcgccgag catcaggttg ttgcgccaat gcgtgttcga cgtgccggcc
      361 gcgagcgtct cggacaggat cgtgttgttg tagaacagca cgcccgcggc gccggccgtc
      421 aaacgcgtgg agcccgcggg caggtgatac gcgatgttgc gaatccaata gaccggcccg
      481 ccgagcgtcg gctggttgca gaacgcgtgc gaggcgtgat tgatgaacag gttccgcagc
      541 acgcgaatgt tgtgcatgct gccgtcggtc tcgatcggat tgtcgtgact gttcgtgatg
      601 tagttgccgt agaagtcgat cgcgaccggg cgcagatccc agtattcgcg cggcggatat
      661 ttcgggccgt ccgcgatgcc ggggcccgac gcgacggagc cgtcggggtt gccgtatgtc
      721 tcgacgttga tgccgtcgtg gaagtccgcg atgtagttgt gcgcgacgac gtggcccggg
      781 ccgtacagct tcacggccac gtacgacgcc atcgcgggcg gaaacgtctg gccctcgacg
      841 ccgtcgaact tccgccacat ctcgccggcc cagccgatca cgtgattcgg gtcgttgcgg
      901 cccatgaaca cgctgtcggc gatgtagaag ccgctcgagc ccgaccagtt cgtgaacacg
      961 ccggcgccga cgttttcgaa ccggctgcgc ttgaccgtga ggcccttcga tcccgcgatg
     1021 aactgcgtgc ccgcgaggat cgcgatctcg gcgttgcgga acgtgatgcc ttcgaaatac
     1081 gtgtgatccg ccgcgcgcac gtcgaacagg gcgtagttgc cgtcgccgtc gaacacgacg
     1141 tcgccgtcgc cggccgcgac gatcgcgatc ggcatctcgg ccgtgccgtc ggccgtcagg
     1201 taatacgtgc cgtcgagcgg cgtcgtgcgg ttcacggttg ggtcgttcgt gtactcgtag
     1261 cggttgtact tgtacaggcc tgcgtgcacg acgatcgtgt cgccgggccg cacgcgcggc
     1321 cggccggccg tcgcccaatc cgtgcccgcg caccattcgt tgtacgcgca catgaggcct
     1381 tcgaacgaag gctcgatctt ctggcccgcg aatccatgcg ggtacacgtg aaacacgcgg
     1441 ccgttcgcgg agcgcgtcgg ctccgcgcgc gtgcgcacga cgaccgtgcg ctcggcggtc
     1501 ccgacgacgc cgtcggggtc ggacatcacg aagcgaactt cgtacggcgt gtcgggcgta
     1561 agatcgagca cgctgcccgc gaacatgttc ggcgcgacga cgtcgatccg cgactccgcg
     1621 tagatccgct cgccttgcag acgcagcagc ggcagcgcgt ctcgccacgc gtcctcgcct
     1681 cgagcacgaa acgtgaccgc caccctcgcg ttgcgattgt cgtcgccctg aatcaaccac
     1741 tcgaagccga gattgattag cgtcgcgggc tcgatgtaga gctcgccggg aacgacgacg
     1801 ttcggcggcg gcagcgcgac gttcgtgggc ccttgcg
//
LOCUS       DATCUD010000370         3138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_32089, whole genome shotgun sequence.
ACCESSION   DATCUD010000370 DATCUD010000000
VERSION     DATCUD010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32089"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1873)
                     /locus_tag="VIQ99_05480"
     CDS             complement(5..1873)
                     /locus_tag="VIQ99_05480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182628.1"
                     /translation="MDTLLRRFGTTTRAVWLAALAALTLAGCGGSGGSTGSPSNPSTP
                     SASTGTLLISVTDADGDFVSYSVDVLSVTLQRRGGGTVEVLPATTRIDFAQLTDLSDL
                     LSVATLAPGDIVGGKIRLDYGNAEIFIEQNGQVVRANAVGANGAPLGVVELDIQLAER
                     EHLVVTRGRAALLALDFDLAASNEVDLTRSPPVVTARPYVVAEAEPVTDKELRLRGAL
                     VSTDTQAGTYTVDVRPWFRPDGNHGGVTIHTTSSTTFEIDGVTATGNAGLAALARKPA
                     GTMTVAFGTLALQDHRFTAEIVHAGDSVSGEGIDAIHGNIVARNGTQLTVKGAYAVRR
                     DRVAHLRRTVIVSVGPNTKVLKTGAPGAVLDATALSVGQSIVAFGSITEPASDTAPAT
                     FDATNGRVRMLPTHLHGNVNVVLPGQLNLNLRAIDRLGIDLFDFTGTGVTQAQDADPT
                     DYEIATSTLPLAGVTVGQPAKVLGHVRPFGSAPADFEGRTVIDHRALPAMLGIGWGET
                     GTQAPFLSMGPAGLVLDIDNSSIGARHTLILGRQVIDLTTLATPPTIAPTTGRALYGI
                     SVGRDVRLFSSFSEFSDAVAAELALGKAVGLVALGSWDEGSSTLRAHHIAMHFVPN"
     gene            2207..>3138
                     /locus_tag="VIQ99_05485"
     CDS             2207..>3138
                     /locus_tag="VIQ99_05485"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY9182629.1"
                     /translation="MRITAGLEALTEAFGADSVFIALLDHAGAAIEKVYAGRSTFSAF
                     NPEVLQGRQLEEFPWLKSRLAHLRLLEIKDTANGSAGQQKDAAELAALNVGALLVVGF
                     NIRGRLGGLLGVGSAAPNPDWPAELQLTVKLVGASCASGLERIELAEDLADVQERDRL
                     VTNTANDGLWDYDVRENSMYFSPRWRAMLGYANDHDVPEWRQLVHPDDLAHVQTQLHE
                     HLEGRIPLFESVHRMQHANGEWRWIQSRVQGRLDENGRLKRLVGVETDITERKLYEEA
                     LFREKESAQITLQSIGDGVVTTDSEARVQYLNPVA"
BASE COUNT          543 a          991 c         1088 g          516 t
ORIGIN      
        1 gtgcctagtt cggtacgaag tgcatggcga tgtggtgcgc acgcagcgtc gagctgcctt
       61 cgtcccagct gccgagtgcc accaagccca ctgctttgcc gagcgcgagc tctgccgcga
      121 cggcgtcgct gaactcgctg aaggacgaga acaggcgaac gtcgcggccg accgagatgc
      181 cgtacaacgc gcggccggtc gtcggcgcga tcgtcggagg cgtcgccagc gtcgtcaggt
      241 cgatgacttg ccggccgagg atcagcgtat ggcgtgcacc gatgctcgag ttgtcgatgt
      301 cgagcacgag ccccgcgggg cccatgctca agaaaggcgc ctgcgtgccg gtctcgcccc
      361 agccgatgcc gagcattgcc ggcagcgcgc gatgatcgat gaccgtgcgt ccttcgaaat
      421 ctgcgggtgc gctaccgaac ggacgcacgt ggccgagcac tttcgcgggt tggcccaccg
      481 tcacgccggc gagcggcagg gtcgaggtcg cgatctcata gtcggtcgga tccgcgtcct
      541 gtgcctgcgt cacgccggtg ccggtgaagt cgaacaggtc gataccgagg cggtcgattg
      601 cccgcaggtt caggttcaac tgacccggca ggacgacgtt gacgttgcca tgcagatgtg
      661 tgggcagcat acggacacgc ccgttcgtcg catcgaacgt agccggcgcc gtgtcggagg
      721 cgggctccgt gatcgagccg aacgcgacga tgctctgacc gaccgacagt gcagtcgcgt
      781 cgagcacggc gcccggagca cccgttttca ggaccttcgt gttggggccg acgctgacga
      841 tcacggtgcg acgcaggtgc gcgacgcggt cgcggcgcac ggcgtatgcg cccttcacgg
      901 tcaattgcgt gccgttgcgc gcgacgatat tgccgtgaat ggcgtcgatg ccttcgccgc
      961 tcacgctgtc gccggcatgc acgatctcgg cggtgaagcg atggtcctgg agcgcgagcg
     1021 tgccgaatgc cacggtcatg gttcccgcgg gcttccgcgc caacgcggca aggccagcgt
     1081 tgccggtcgc ggtgacgccg tcgatctcga acgtggtcga ggacgtcgtg tgaatcgtca
     1141 cgccgccatg attgccgtcc ggccgaaacc aaggacgaac gtcgacggta taggtaccgg
     1201 cctgcgtgtc ggtcgacacc aacgcgccac gcagccgcag ctctttgtcg gtgacaggct
     1261 cggcttctgc caccacgtag gggcgagccg tgacgaccgg cggcgaccgc gtgaggtcga
     1321 cctcgttcga ggcggccagg tcgaagtcga gcgcgagcaa tgccgctcgg ccgcgcgtga
     1381 ccacgaggtg ctcgcgctcg gcgagctgaa tgtcgagctc gaccacgccg agcggtgcgc
     1441 cgttcgcacc gacagcgttc gcgcggacga cctggccgtt ctgctcgatg aagatctcgg
     1501 cgttgccgta gtcgagccga atcttgccgc cgacgatgtc gccgggagcc aatgtggcga
     1561 cggacaacaa atcggagaga tcggtcagct gcgcgaaatc gatgcgggtg gtcgcgggca
     1621 acacctcgac ggtgccgccg ccacggcgtt gcagcgtgac ggacaaaacg tcgacggagt
     1681 agctgacgaa gtcgccgtcg gcgtccgtga cgctgatcag caatgttccg gtgctcgcgc
     1741 tcggcgtgct gggattcgag ggcgaaccgg tcgatccgcc cgacccgccg caaccggcga
     1801 gcgtcagggc cgcgagcgcc gccaaccaga cggcgcgggt ggtcgtgcca aagcgtctca
     1861 agagcgtgtc catgagtggg tctcctttgt gaaacgcgat tactcggagg tcaccaacgc
     1921 gggcgggccg ccagccgttg acccgttatg caatctcgac ctacctgccg gcatcgcttg
     1981 taatcctcgc ggttgctgtc agaatgccca caggccgagc ccaatcaaga ggttgcgcga
     2041 ctaaatgagt gcccgggttg aagacgggac aggcacgcga ggggctggtg aatcgccgag
     2101 tgcggagcga ccgttcgggc ggtcgcgagc gcgaacgccg ggactcgatc tgatctgcac
     2161 gaaggttgcc gtcgaccttc aaggcattgc tgccgatacg gcagcggtgc gaattaccgc
     2221 ggggctcgag gctttgaccg aggccttcgg cgcggattcg gtgttcatcg cgctgctcga
     2281 ccacgcgggc gccgcgatag agaaggtgta tgccggccgc tccactttct cggcgttcaa
     2341 ccccgaagtg cttcagggca ggcaactcga ggagttcccg tggctcaagt cgcggctcgc
     2401 gcacctgcgt ctgctcgaga tcaaggacac ggcgaacggc tccgcagggc aacagaaaga
     2461 tgccgctgag cttgccgcgc tgaatgtcgg tgcgttgctc gtggtgggtt tcaacattcg
     2521 cggccgcctc ggcggcttgc tcggcgtggg cagcgccgca ccgaatcccg actggccggc
     2581 cgagttgcag ctgaccgtca agctcgtggg tgcgagctgc gcgagcggcc tcgaacgcat
     2641 cgagctcgcc gaggacctcg ccgatgtgca ggagcgtgat cgcctcgtca cgaacacggc
     2701 gaacgatggc ctctgggact acgacgtccg cgagaactcg atgtacttct cgccgcgctg
     2761 gcgggcgatg ctcggctacg cgaacgatca cgacgtgccc gagtggcggc agctcgtgca
     2821 ccccgatgat ctcgcgcacg tgcagacgca actacacgag cacctcgagg gccgaatccc
     2881 gctgttcgag agcgtgcaca ggatgcagca cgccaacggc gaatggcgct ggatccagag
     2941 ccgcgtacag ggtcgcctcg acgagaatgg tcggctgaag cggctggtcg gagtcgagac
     3001 cgacatcacg gagcgcaagc tgtacgagga ggcgttgttc cgcgagaagg aaagcgccca
     3061 gatcacgctc cagtcgatcg gcgacggtgt cgtgacgacc gattccgaag cacgcgtaca
     3121 atacttgaat cccgtggc
//
LOCUS       DATCUD010000371         1736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_3842, whole genome shotgun sequence.
ACCESSION   DATCUD010000371 DATCUD010000000
VERSION     DATCUD010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3842"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..174
                     /gene="nuoK"
                     /locus_tag="VIQ99_05490"
     CDS             <1..174
                     /gene="nuoK"
                     /locus_tag="VIQ99_05490"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019881823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY9182630.1"
                     /translation="LNFVAFSHFLGDITGQVFVFFILTVAAAEAAIGLAILVVLFRNT
                     RSINVEELDRLKG"
     gene            177..>1736
                     /gene="nuoL"
                     /locus_tag="VIQ99_05495"
     CDS             177..>1736
                     /gene="nuoL"
                     /locus_tag="VIQ99_05495"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018748779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEY9182631.1"
                     /translation="MANVYLTIVLAPLVAAIVAGLFGKKIGRAGAHWITIVGVAVSFA
                     LSMYVLKYLLLDGGESYNGTVYRWASMGGIYFEVGFLVDRLTVLMMTVVTFVSLCVHV
                     YTIGYMHDDDGYQRFFSYISLFTFAMLMLVMSNNFLQLFFGWEAVGVVSYLLIGFWYK
                     RPTAIFANLKAFLVNRVGDFGFLLGIAALAMATGTLDYALTFADAERLSGLTIEIFSG
                     TQWSLLTFACICLFVGAMGKSAQVPLHVWLPDSMEGPTPISALIHAATMVTAGIFMVA
                     RMSPLFELSQTALSVVIIIGAITAFFTGLLGIVAQDIKRVIAYSTLSQLGYMTVALGA
                     SAYAAGIFHLMTHAFFKALLFLAAGSVIIAMHHEQDIRKMGGLWRYMPITFWTSVIGT
                     LALIGFPGFSGFFSKDALIEAVHASTTPGHALAYWAVLIGVFITSLYSFRLLFVVFHG
                     EERMDHHTKEHLHETPWVVTGPLIALAIPSVIIGWLTIGPVLFGDYFEGAIVNHEGQN
                     PLEIVGEEFHGP"
BASE COUNT          261 a          535 c          562 g          378 t
ORIGIN      
        1 ctcaacttcg tggcgttctc gcacttcctc ggcgacatca ccgggcaggt gttcgtgttc
       61 ttcatcctga ccgttgcggc agcggaggcg gcgatcggcc ttgcgatcct ggtcgtgctg
      121 ttccgcaaca cgcgcagcat caacgtcgaa gagctcgata ggctgaaggg ctgagcgtgg
      181 caaacgtcta tctcaccatc gtgctcgcac cgctcgtcgc ggccatcgtc gccgggctgt
      241 tcggcaagaa aatcggccgg gcaggggcgc actggatcac gatcgtcggc gtggcggtct
      301 cgttcgcgct gtcgatgtac gtgctgaagt acttgttgct cgatgggggc gaaagctaca
      361 acggcaccgt gtaccgctgg gcctcgatgg gcggcatcta cttcgaggtg ggcttcctcg
      421 tcgaccggct caccgtgctg atgatgaccg tggtcacgtt cgtctcgttg tgcgtgcacg
      481 tctacacgat cggctacatg cacgacgacg acggctatca acggttcttc agctacatct
      541 cgctgttcac gttcgcgatg ttgatgctcg tcatgagcaa caacttcttg cagctgttct
      601 tcggctggga ggcggtcggc gtcgtgtcgt atctcctgat cggcttctgg tacaagcggc
      661 cgacggcgat cttcgcgaac ttgaaggcgt tcctcgtgaa ccgcgtcggc gacttcgggt
      721 tcctgctcgg gatcgcggcg ctcgcgatgg ccaccggtac gctcgactac gcgctgacgt
      781 tcgccgacgc cgagcgtctg tcggggctca cgatcgagat cttcagcggc acgcagtggt
      841 cgctgctgac gttcgcgtgc atctgcctgt tcgtcggcgc gatgggcaaa tcggcgcagg
      901 taccgctgca cgtgtggctg ccggattcga tggaaggccc gacgccgatc tcggcgttga
      961 tccacgccgc gacgatggtc acggccggca tcttcatggt cgcgcggatg tcgccgctgt
     1021 tcgagctgtc gcagacggcg ctgtccgtgg tcatcatcat cggcgcgatc acggcgttct
     1081 tcacgggtct gctcggcatc gtggcgcagg acatcaagcg cgtgatcgcg tactcgacgc
     1141 tgtcccagct cggttacatg accgtggcgc tcggcgcgtc ggcgtacgcg gccggcatct
     1201 tccacttgat gacgcacgcg ttcttcaagg cgctgctgtt cctggccgca ggctccgtga
     1261 tcatcgcgat gcaccacgag caggacatcc gcaagatggg cggcctgtgg cgctacatgc
     1321 cgatcacgtt ctggacgtcg gtgatcggca cgctcgcgtt gattggattc cccggcttct
     1381 cgggtttttt ctcgaaggac gcgctgatcg aggcggtcca tgcgtcgacg acgccgggtc
     1441 atgcgctcgc gtattgggcc gtgctgatcg gcgtgttcat cacgtcgctc tacagcttca
     1501 ggctgctgtt cgtcgtgttc catggcgagg aacgcatgga ccaccacacg aaggagcacc
     1561 tgcacgagac gccgtgggtc gtgacggggc cgttgatcgc cttggccatc ccgtcggtga
     1621 tcattggctg gctcacgatc gggcccgtgc tcttcggcga ctacttcgag ggcgcgatcg
     1681 tcaaccacga agggcagaac ccgctcgaga tcgtaggcga agagttccac ggcccg
//
LOCUS       DATCUD010000372         2228 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_74769, whole genome shotgun sequence.
ACCESSION   DATCUD010000372 DATCUD010000000
VERSION     DATCUD010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74769"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VIQ99_05500"
     CDS             complement(<1..941)
                     /locus_tag="VIQ99_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013031677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY9182632.1"
                     /translation="MKPIALLVDDEPHICELLSITLERMDIATRACLDITSAKQVLSE
                     QPFDLCLTDMRLPDGDGLELVEWIQREVPGTPVAVITAHGSVEAAVRALKLGAFDFVS
                     KPLDLNDLRKLVTAALKLRGAAVPRSSTTDALVGRSPPMERVRAMIAKVARSQAPVHI
                     SGESGTGKELVARMIHDTGPRREGPFVPINCGAIPTELMESEFFGHKKGSFTGAVSDK
                     IGLIQTAEGGTLFLDEVADLPLHMQVKLLRVIQEKTIRPVGQASEIPVDVRILSATHK
                     NLGELVAEGSFREDLFYRINVIGLNVPPLRDRGEDVL"
     gene            complement(938..>2228)
                     /locus_tag="VIQ99_05505"
     CDS             complement(938..>2228)
                     /locus_tag="VIQ99_05505"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY9182633.1"
                     /translation="SVGTLALLLRSERAFLLAAVTALALLGEQTYSQLQGLTTIAQYA
                     PAGILGAVVFVITAVVQLLRTRLVETEALAEQRGLDLRNLVELNEYIIQHLRESIVVV
                     DGEDQVRLINESAVKQLGAGADRTEVKLATLSAELARGLESWRRGAHVDRAQVAFPVA
                     DGANIQPHFAPLSAGRDGGVVIFLEDTSLIADRVQQAKLAALGRLSASIAHEIRNPIG
                     AMSHAGQLLAESPAMGQAEHRLTDIIRVNARRVSQIVESVLALSRRAPTHPERLQLVP
                     WVEDFTREFVQTLELYEGAVSLVGDSPDIEVRMDPTHLHQILWNLCDNAVKYASAAAG
                     AIAVEISCGVLEPSGRPYLEVADRGPGINPDKVEQIFEPFYTSQPGGTGLGLYISREL
                     AERNGAALRYQPRRGGGSAFRIVFADPKRWQLNEDSP"
BASE COUNT          364 a          751 c          729 g          384 t
ORIGIN      
        1 atcagcacgt cctcgccgcg atcgcggagc ggcggcacgt tgaggccgat cacgttgatt
       61 cgatagaaga gatcctcgcg gaagctaccc tccgcgacga gctcgcccaa gttcttgtgc
      121 gtggcgctca agatccgcac gtccaccgga atctcgctgg cctgcccgac ggggcggatc
      181 gtcttctcct gtatcactcg cagcagcttc acttgcatgt gcagcggcaa atcggcgacc
      241 tcgtcgagaa acagcgtgcc gccctcggca gtctggatca atccgatctt gtcgctgacg
      301 gcacccgtga agctgccctt cttgtggccg aagaactcgc tctccatgag ctcggtcggg
      361 atcgcgccgc agttgatcgg cacgaacggg ccctcgcggc gcggccccgt gtcgtgaatc
      421 atgcgagcga cgagctcctt gccggtgccc gattcccccg agatgtgcac gggcgcctgg
      481 ctccgcgcga ccttcgcgat catcgcgcgg acccgctcca taggaggcga gcggccgacc
      541 agcgcatcgg tcgtcgagct gcgcggcacg gccgcgcccc tgagcttcag cgccgccgtc
      601 acgagcttgc gcaggtcgtt gaggtcgagc ggcttcgaca cgaagtcgaa tgcgccgagc
      661 tttagcgcgc gcacggccgc ttccacgctg ccgtgcgccg tgatcacggc caccggcgtg
      721 ccgggcacct cgcgctgaat ccactcgacc agctcgaggc cgtcgccgtc cggcaagcgc
      781 atgtcggtca ggcacaggtc gaacggttgc tcggagagca cctgtttcgc gctcgtgata
      841 tcgaggcacg cgcgcgtcgc gatgtccatg cgttcgagcg tgatcgacag gagctcgcag
      901 atgtggggct cgtcatcgac gagcagggcg atcggcttca tggagaatct tcgttcaact
      961 gccagcgttt ggggtctgcg aacacgatgc ggaacgcgct gccgccgccc cggcgcggct
     1021 ggtagcgtag cgcggcgcca ttgcgttcgg cgagctctcg tgaaatgtag agaccgaggc
     1081 cggtgccgcc aggctggctc gtgtagaacg gctcgaagat ctgctcgacc ttgtccggat
     1141 tgatgccggg tccgcggtcg gcgacctcga gatacgggcg ccccgagggc tcgagcacgc
     1201 cgcaggagat ttccacggcg atcgcgcccg cggcggcact cgcgtatttg accgcgttgt
     1261 cgcagaggtt ccacaggatc tgatgcagat gcgtcgggtc catccgcacc tcgatgtccg
     1321 gcgagtcgcc cacgagactc acggccccct cgtagagctc gagcgtttgc acgaactcgc
     1381 gcgtgaagtc ctcgacccac ggcacgagct gcaatctttc gggatgggtg ggtgcgcggc
     1441 gagacaacgc gagcacgctc tcgacgatct ggctcacgcg gcgcgcgtta actctaatga
     1501 tgtccgtgag ccggtgctcg gcctgaccca tggccggaga ttccgcgagc agctggcccg
     1561 cgtggctcat cgcgccaatc gggttgcgga tctcgtgcgc gatgctggcg ctcaaccgtc
     1621 cgagcgcggc cagcttcgcc tgttgaactc ggtcggcaat cagcgacgta tcctcgagaa
     1681 agatcacgac gccgccgtcg cggcccgcgc tcaacggcgc gaagtgcggc tggatattgg
     1741 ctccgtccgc caccggaaac gccacctgcg cgcgatcgac gtgcgcgccc cggcgccagc
     1801 tctcgagccc tcgagcgagc tccgcagaca gcgtcgcgag cttgacctcg gtgcgatccg
     1861 cgccggctcc gagctgtttg accgcggatt cgttgatcaa ccgtacctgg tcttcgccgt
     1921 cgaccacgac gatgctctca cgcaagtgct gaatgatgta ctcgttcagc tcgacgagat
     1981 tgcgaagatc gaggccgcgt tgctcggcaa gggcctcggt ttcgacgagc cgtgtgcgca
     2041 ggagttgcac gaccgccgtg atcacgaaca cgaccgcgcc caagatcccg gccggcgcat
     2101 actgcgcgat cgtcgtcagg ccttgcagct gcgaataggt ttgctcgccg agcaacgcga
     2161 gcgccgtgac cgcggcgagc aggaaggcgc gctccgagcg caacagcagc gcaagcgttc
     2221 cgaccgac
//
LOCUS       DATCUD010000373         2489 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_32117, whole genome shotgun sequence.
ACCESSION   DATCUD010000373 DATCUD010000000
VERSION     DATCUD010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2489
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32117"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="VIQ99_05510"
     CDS             complement(<1..676)
                     /locus_tag="VIQ99_05510"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEY9182634.1"
                     /translation="MTGFSSAETRVGSFRLVWEIRSVNHRFLELGFRLPEDLRAVEPE
                     CRDLVASVVKRGKVDCALKVTADERSAAARKTVAGALDALRSLETDVRRAFPEAKPLT
                     AHEVLRWPGVLEEPAQNVAALGESVKACLGAALRALEEARGREGMRIAEMLAKRNAGI
                     TALIVGVKPQLEGVQGRYRERLKERLQKLDVQAEPERLEQELALLAQRVDVAEEIDRL
                     GSHVAEI"
     gene            868..1593
                     /locus_tag="VIQ99_05515"
     CDS             868..1593
                     /locus_tag="VIQ99_05515"
                     /inference="COORDINATES: protein motif:HMM:NF025053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HEY9182635.1"
                     /translation="MSLAGNRTENQDRVDVVAGGAALLLVVVDGMGGHAHGAKAAEVT
                     VATLKECFGETALPVFDPQGFLTLSLARAHDRVVKLGEGVALDHKPRATCAVCLVQDD
                     ASYWAHVGDSRIYHLRRGSIKERTRDHSHVELLLREGLIVESEMRGHPMRNFVECCLG
                     GDVPLPDMSVTARHKLEPGDVLLTCTDGLWSGLEDPDFAKFGADSRTPLDDALRSLAE
                     RAVGTNSPYSDNTSVAAVRWHGA"
     gene            1663..2379
                     /gene="rph"
                     /locus_tag="VIQ99_05520"
     CDS             1663..2379
                     /gene="rph"
                     /locus_tag="VIQ99_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEY9182636.1"
                     /translation="MRPSGRRRDEMRYVVLTPHFTRHAEGSVLAEFGDTRVLCTASVE
                     AKVPPFLKGQAQGWVTAEYGMLPRSTHTRTQREAARGTQSGRTLEIQRLIGRSLRAVV
                     DRAALGEHTITIDCDVLQADGGTRTAAITGGYVALALAAAQLAKTGKIARNPIHGQVA
                     AVSVGIVGGEAVLDLDYAEDSEAETDMNVVMNDAKGYIEVQGTAEGHAMQRRELDALL
                     DLAGTGIERLLAAQAAVLGK"
BASE COUNT          439 a          824 c          819 g          407 t
ORIGIN      
        1 cgatctccgc gacgtggcta ccgagccgat cgatctcttc cgctacgtcg actcgttgcg
       61 ccagcaacgc gagctcttgc tccaagcgtt cgggttccgc ttgcacatcg agtttttgca
      121 ggcgctcctt caggcgctcg cgataacggc cttgcactcc ctcgagctgg ggtttgactc
      181 cgacaatcaa cgcggtgatg ccggcgttac gcttcgcgag catttccgcg atccgcatgc
      241 cttcccggcc gcgcgcctct tcgagcgctc gcagcgctgc gccgaggcaa gccttgaccg
      301 actcgccgag cgcggcgacg ttctgtgccg gctcctcgag cacccccggc caacgcaaca
      361 cctcgtgagc ggtcagcggc ttcgcctcgg gaaacgcgcg cctcacatcc gtctccagcg
      421 agcgcaacgc atcgagcgcg ccggcgacag tcttccgcgc cgcggcgctc cgctcgtccg
      481 cggtgacctt caaggcgcaa tcgactttgc cccgcttgac taccgacgcc acgagatcgc
      541 ggcactcggg ctccacggcc cgcaggtcct cgggcaaacg aaacccgagc tcgagaaagc
      601 ggtgattgac gctgcgaatc tcccatacga gccggaacga cccgacccgc gtctcggcgc
      661 tggaaaatcc ggtcatgctg tgaggcattc gattgagtcc ggaagtggtt tcagacaatc
      721 tgagcgtcgt tggcgctcgg ggagcgagtg tacatcagcg tgtttctgcc tcgactggcg
      781 cggcaaacgc cgcgctcggg tgagcgacgc gattagaaga ttaaggaacg caaaatcggg
      841 gattcagtgc gcgtcgatta tgcaaagttg agcctggccg gcaatcgaac ggaaaaccag
      901 gatcgtgtcg atgtcgtcgc gggtggcgca gcgttgctgc tcgtggtcgt cgacgggatg
      961 ggtgggcatg cccacggggc caaggcagcc gaggtcaccg ttgccacgct gaaagagtgc
     1021 ttcggcgaga cggcgttgcc ggtgttcgat ccgcaagggt tcctgacgct ctcgctcgct
     1081 cgcgcgcacg atcgagtcgt gaagctcggc gaaggcgtgg cgctcgatca caaaccacgt
     1141 gcgacgtgcg cagtatgcct cgtgcaggac gatgcttcct attgggcgca cgtcggcgac
     1201 agccgcatct atcacctccg acgcggaagc atcaaggagc gcacgcgcga ccacagccac
     1261 gtcgagctgc tgctgcgcga agggttgatc gtcgaaagtg agatgcgcgg acatccgatg
     1321 cgcaacttcg tggagtgctg cctcggcgga gacgtgccgc tacccgacat gagcgtcacg
     1381 gcgcgccaca agctcgagcc cggcgacgtg ctgctcacgt gcaccgacgg gctctggtcg
     1441 ggtctcgagg acccggactt cgcgaagttc ggagcagata gccgcacgcc gctcgacgac
     1501 gcgttgcgga gcttggcgga gcgcgccgtc ggcacaaact ctccgtacag cgacaacacc
     1561 agcgtcgcgg cggttcgctg gcacggcgcg tagcgcccgg acgctcggcg tatggcggca
     1621 agctgttaag ctgtcgccca attgccttcc acggagtcga ttatgcggcc gagcggacgc
     1681 cgccgtgacg aaatgcgtta cgtggtgctc acgccgcatt tcacgcgcca tgccgaagga
     1741 tccgtgctcg ccgagtttgg cgatacacgc gtcctgtgca cggcttcggt cgaagccaag
     1801 gttccgccgt ttctgaaggg ccaagcacaa ggttgggtca cggcggagta cggaatgttg
     1861 ccgcggtcca cgcatacacg cacacagcgc gaggccgcgc gtggcacgca gagcggccgc
     1921 acgctcgaga tccaacggct gatcggccgc agcttgcgcg ccgtcgtcga tcgcgccgcg
     1981 ctcggcgagc acacgatcac gatcgactgc gacgtcctac aggccgacgg cggcacgcga
     2041 acggctgcga tcacgggcgg ctacgtcgcg ctggcgctgg ctgcggcgca gctcgccaag
     2101 acaggcaaga tcgctcgcaa cccgatccac gggcaagtcg ccgcggtgtc ggtcggcatc
     2161 gtcggcggcg aggcagtcct cgatctcgat tacgccgaag actcggaagc cgagaccgac
     2221 atgaacgtcg tcatgaacga tgcgaagggt tacatcgagg tccaaggcac cgccgaaggg
     2281 cacgcgatgc aacgccgcga gctcgacgcg ttgctcgatc tcgccggaac cggcatcgaa
     2341 cggctgctcg ccgcgcaagc cgccgtgctc ggcaagtgac cctgcccggc gactgggtgc
     2401 tcgccacgag caatcgcggc aaggtcgccg agcttgccgg gttgctggcc gaggcacgcc
     2461 tgccgatgcg ggtcacgccg caagacgcg
//
LOCUS       DATCUD010000374         2635 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60223, whole genome shotgun sequence.
ACCESSION   DATCUD010000374 DATCUD010000000
VERSION     DATCUD010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60223"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..590
                     /gene="fabG"
                     /locus_tag="VIQ99_05525"
     CDS             <1..590
                     /gene="fabG"
                     /locus_tag="VIQ99_05525"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008212755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEY9182637.1"
                     /translation="SPKSHGAVLEVGSDASVEALFAGIAEREGAPEIVVNNAGITRDN
                     LLMRMKAEEWNDVVSTNLSSVYRVCKASLRGMMKARYGRIVNVSSVVALIGNPGQTNY
                     AAAKAGMIGFTKSLAREIASRNITVNVVAPGFIDTDMTRALDEKQVQTLREQIPLGRL
                     GTSADIAGAVAFLASDLGGYITGETLSVNGGLAMY"
     gene            746..988
                     /gene="acpP"
                     /locus_tag="VIQ99_05530"
     CDS             746..988
                     /gene="acpP"
                     /locus_tag="VIQ99_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008484992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY9182638.1"
                     /translation="MSSVEDQVRGIIAEQLGLKAEEIKNDASFVDDLGADSLDTVELV
                     MALEEEFETEIPDEEAEKITTVQHAIDYIRARQNEA"
     gene            1050..2291
                     /gene="fabF"
                     /locus_tag="VIQ99_05535"
     CDS             1050..2291
                     /gene="fabF"
                     /locus_tag="VIQ99_05535"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018992330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEY9182639.1"
                     /translation="MSKRRVVVTGLGLISPVGNTVVDGWNNVRDGVSGIGRIEHMDVS
                     AYTTQFAGTIRNFDLGKYLEPKEARKCDQFMHYGIASSMQAMQDSGMEVKEDKAHRYG
                     VAMGSGIGGVSTIEANHNKWLEGGPRKISPFFVPGTIINMISGHVSIKYGLTGPNLAV
                     VTACTTSTHCIGLAARLVQSGDADFMLAGGAEYATTPLGLGGFCAARALSTRNDDPKR
                     ASRPWDKDRDGFVLSDGAGCIALEEYEHAKARGARIYAEFAGFGMSADAYHITAPSEN
                     GQGAYQCMVNAMRDAGLNREEIGYINAHGTSTPLGDVAETVAIKRAFESSAKTVAVSS
                     TKSTTGHMIGAAGAAEAVFTILALHEQVIPPTINLDNPDPACDLDYTPNVARSVKLEA
                     ALSNSFGFGGTNGTVVFKRLR"
     gene            2372..>2635
                     /locus_tag="VIQ99_05540"
     CDS             2372..>2635
                     /locus_tag="VIQ99_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005000807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HEY9182640.1"
                     /translation="MKTLWLVNGKPTGVDPADRGLAYGDGLFETMGAVDGRIRWLDLH
                     FDRLEDGCRRLAIPPPQRGVLEQEIAMSCPKRGRAIVKVIVTRG"
BASE COUNT          554 a          817 c          831 g          433 t
ORIGIN      
        1 tgtcgcctaa gagtcacggc gccgtgctcg aagtcggcag cgacgcctcc gtcgaggcgt
       61 tgttcgcagg catcgctgag cgcgagggcg cgcccgagat cgtcgtcaac aacgcgggaa
      121 tcactcgcga caatttgttg atgcggatga aagcggagga gtggaacgac gtcgtctcga
      181 cgaacctgtc gtccgtctat cgcgtctgca aggcgagctt gcgtggaatg atgaaagccc
      241 gctacggccg aatcgtgaac gtgagctccg tcgtcgcatt gatcggcaat ccgggacaga
      301 ccaactacgc cgccgccaag gcgggcatga tcggcttcac gaagtcgttg gcgcgcgaga
      361 tcgcatcgcg aaacatcacg gtgaacgtcg ttgcgccggg gttcatcgat accgacatga
      421 cacgcgccct cgatgagaag caagtacaga cgttgcgcga acagatccca ctcggccgac
      481 tcgggacgag cgccgatatc gccggagccg tggcgttctt ggcctccgac ctcgggggat
      541 acatcacggg agagacgttg agcgtcaacg gtggactggc gatgtactga cgggggcccg
      601 gccaaagaat cgaggcatta caacgagatt ccgccggtct ggaccccgag aacgtcggta
      661 gaatggcccc cacgattcca atacaatacg cgccacatcg gccgggcccc ttggtccggc
      721 cggtcaatta ataaggggta cgaacatgag tagcgtcgaa gatcaagtca gagggatcat
      781 tgccgaacag ctcggcctca aggccgagga aatcaagaac gacgcgtcgt tcgtcgacga
      841 tcttggcgcg gactccttgg ataccgtgga gctcgtaatg gccttggaag aggaattcga
      901 aaccgaaatc cccgacgagg aagccgaaaa gatcaccacg gtgcagcacg ccatcgacta
      961 tatccgcgcc cggcagaacg aggcctaaga gcacgtccta gcgttgcgca gtccacaccc
     1021 attctcgttt ccgagctcag gtagcgaccg tgtctaagcg gcgcgtcgtg gtcaccggac
     1081 tcggcctgat ctctccggtc ggcaacaccg ttgtcgacgg atggaacaac gttcgcgatg
     1141 gcgtcagcgg catcggccgc atcgagcaca tggacgtcag cgcctacacg acgcaattcg
     1201 caggcacgat ccgcaacttc gatctcggca agtacctcga gcccaaagag gctcgcaagt
     1261 gcgaccagtt catgcactac ggcatcgcgt cctcgatgca ggcgatgcaa gactcgggga
     1321 tggaggtcaa agaagacaaa gcgcaccgtt acggggtagc catgggctcc ggcatcggcg
     1381 gcgtcagcac gatcgaagcc aaccacaaca agtggctgga gggcgggcct cgcaagatct
     1441 cgccattctt cgtccccggc acgatcatca acatgatctc gggccatgtg tcgataaagt
     1501 atggactgac gggccccaac ttggccgtcg tcaccgcgtg cacgacgagc acgcattgca
     1561 tcggtctcgc ggcacgcttg gttcagtccg gcgacgcaga cttcatgttg gccggcggcg
     1621 ccgaatatgc gacgacgcca ctcgggctcg gcggcttttg tgccgcgcgc gcgttgtcga
     1681 ctcgcaacga cgatccgaaa cgagcgagcc gcccttggga caaggatcgg gacggcttcg
     1741 tattgagtga cggcgccggt tgcatcgcac tcgaggagta cgagcacgcg aaggcccgcg
     1801 gcgcacgcat ctacgccgag ttcgcaggct tcggcatgag tgccgacgca taccacatca
     1861 cggcaccctc cgagaacggg cagggcgcct atcaatgcat ggtgaatgcc atgcgcgacg
     1921 ccggcctcaa ccgcgaagag atcggataca tcaacgcgca cggcacgtcg acgccgctcg
     1981 gcgacgtcgc ggaaacggtg gcgatcaagc gagcgttcga gagttccgcg aagaccgtcg
     2041 ccgtcagctc cacgaagtcc acgacaggcc acatgatcgg cgcggcgggc gcggccgaag
     2101 ccgtcttcac gatcctggct ttgcatgagc aagtgattcc gcccacgatc aacctcgata
     2161 atcccgaccc cgcctgcgat ctcgattaca cgccgaacgt ggcgcgatcg gtgaagctcg
     2221 aggcagcgct gtcgaactcg ttcggcttcg gcggcacgaa cgggacggtg gttttcaagc
     2281 gcctgcgctg attggccgcg caccggcgca catgacggtc gcgccggctt ctgctacaaa
     2341 accacttcat ccatcgcgta cgcgatcagc cgtgaaaacg ctctggctcg tcaacggaaa
     2401 accgaccggc gtggatcccg cggatcgcgg gctcgcgtac ggcgacgggc tgttcgagac
     2461 gatgggcgcc gtcgatggac gaatacgttg gctcgacctg cacttcgacc gcctcgagga
     2521 cggctgccgt cgtctcgcga ttccgccgcc gcagcgcggc gtactggagc aagagatcgc
     2581 gatgagctgc ccgaagcggg gacgcgcaat cgtgaaggtg atcgttaccc gcggg
//
LOCUS       DATCUD010000375         2221 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10636, whole genome shotgun sequence.
ACCESSION   DATCUD010000375 DATCUD010000000
VERSION     DATCUD010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2221)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2221)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2221
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10636"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1448)
                     /locus_tag="VIQ99_05545"
     CDS             complement(<1..1448)
                     /locus_tag="VIQ99_05545"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 domain-containing protein"
                     /protein_id="HEY9182641.1"
                     /translation="MAARTQWSPGPAAWQDDLAPLPRAEWSYDRAAHLLAHAGFGGTP
                     EEIQRLADLGLERAVESLVEYEDIPNPKMQPFVESGLWDPTLDGFPDSRPEATDRAER
                     DGVSMGVATKPAGNRPVQPVSDRFFYWLRATMLETRRLGYWWANRMLQTAHPLEQKMA
                     LLWHGHFATHENKVRDYRKMHQQIELFEKHATGNLRDLTVAVAENPAMLYFLDAQFNV
                     KGAPNENFAREVMELFTMGVGNYTEQDVRECARAFTGWYFDDLEFKVDPEKHDAGSKT
                     FLGRTGDFDGVDVIEIIFEQPVTAEFLAAKVYRFLVRDELSPELNAKLGAVLRDADYE
                     IKPLLTAILSSKDFYSAASYGGHIKGPVEHMVAMMKHLGAPTMPGVPDFNQATIAMGQ
                     HLLNPPSVAGWAGGKAWITPGLLIARGNVARDVLIPDMTGFRDWNFLAGTDDVLGQRL
                     RAGYDIGAATAVGDPANMSEFDRVALERDEKF"
     gene            complement(1461..>2221)
                     /locus_tag="VIQ99_05550"
     CDS             complement(1461..>2221)
                     /locus_tag="VIQ99_05550"
                     /inference="COORDINATES: protein motif:HMM:NF019040.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1501 domain-containing protein"
                     /protein_id="HEY9182642.1"
                     /translation="GARDNLIVNVSASQTLAVKAERHVPLVFVDPDSFQREVFAQEKP
                     LLEKLGTHEAPVGDAHRYVLEVTKSAAQASEIVRAAWDRYAATANPDLRLLDLNKVVA
                     LIEADFPTQLYYVPLRNSLFDTHVNQAAPHDRQLQYCSDAIEGFFAEMQRIGRADDVV
                     MYVHSEFGRRVPENTSLGTDHGTAQVNFVIGNPVKGGMYGQPPSLSELVLGDNLASTT
                     DFRRVYATLIQEWLGADAAGVLGQKFETLGLFPT"
BASE COUNT          356 a          741 c          718 g          406 t
ORIGIN      
        1 ttgaacttct cgtcgcgctc gagcgcgacg cgatcgaact ccgacatgtt cgcggggtcg
       61 ccgacggccg ttgccgcgcc gatgtcgtaa ccggcgcgca ggcgttgacc cagcacgtcg
      121 tcggtgcccg cgaggaagtt ccaatccctg aagccggtca tatccgggat cagcacgtcg
      181 cgagccacgt tgccgcgcgc gatcaacaac cccggcgtga tccacgcctt gccgcctgcc
      241 caacccgcaa cggacggcgg gttcaacaag tgctgaccca tcgcgatcgt cgcctgattg
      301 aaatcgggga cgcccggcat cgtcggcgca ccgaggtgct tcatcatcgc gaccatgtgc
      361 tcgacggggc ccttgatgtg gccgccgtag ctcgccgcgc tgtagaaatc cttcgaagag
      421 aggatcgccg tcagcagcgg cttgatctcg tagtcggcat cgcgcagcac cgcaccgagc
      481 ttcgcgttga gctccggcga cagctcgtct cgaaccagga agcgatagac cttcgcggcc
      541 aagaactcgg cggtgacggg ctgctcgaag atgatctcga tcacgtcgac gccgtcgaag
      601 tcgccggtgc gtcccagaaa ggttttcgat cccgcgtcgt gcttctcggg atcgaccttg
      661 aactcaaggt cgtcgaagta ccaacccgtg aacgcgcgcg cgcattcgcg gacgtcctgc
      721 tcggtgtagt tgccgacgcc catcgtgaac agctccatga cctcgcgcgc gaaattttcg
      781 ttcggcgcgc ccttcacgtt gaactgcgcg tcgaggaaat acagcatcgc ggggttctcc
      841 gcgaccgcga cggtcaggtc gcgcaggtta ccggtcgcgt gcttctcgaa cagctcgatc
      901 tgctggtgca tcttgcggta atcgcgcacc ttgttctcgt gcgtcgcgaa gtggccgtgc
      961 cacaagagcg ccatcttttg ctcgagcggg tgcgccgtct gaagcatccg attcgcccac
     1021 cagtagccga ggcgccgcgt ctcgagcatc gtggcgcgca gccagtagaa gaatcgatcc
     1081 gagacgggct gcacggggcg attgccggcg ggtttcgtag cgacgcccat cgacacgccg
     1141 tcgcgctcgg cgcgatcggt cgcttcgggc cggctgtcgg ggaagccgtc gagcgtggga
     1201 tcccacaggc ccgactcgac gaacggctgc atcttcggat tcgggatgtc ttcgtattcg
     1261 acgagcgact cgacggcgcg ctcgagcccc aagtcggcga gccgctgaat ctcctccggc
     1321 gtgccgccga accccgcgtg cgccagcaga tgcgcggcgc ggtcgtagct ccattcggcg
     1381 cgcggcagcg gcgcgagatc gtcttgccaa gccgcgggtc ccggagacca ttgtgttcgc
     1441 gccgccatgc tcgagctccg ctaggtcggg aacagcccga gggtctcgaa cttctgcccg
     1501 aggacgccgg ccgcatcggc cccgagccac tcctggatca acgtcgcgta gacgcggcgg
     1561 aagtccgtcg tgctcgcgag gttgtcgccg agcacgagct ccgacaggct cggcggctgg
     1621 ccgtacattc cgcctttcac gggattcccg atcacgaagt tcacctgcgc cgtgccgtgg
     1681 tcggtgccta agctcgtgtt ctcggggact cgccgcccga actcgctgtg cacgtacatc
     1741 acgacgtcgt cggcgcggcc gatgcgttgc atctcggcga agaatccctc gatcgcgtcg
     1801 gagcaatact ggagctgccg atcgtgcgga gcggcctggt tcacgtgcgt gtcgaacagg
     1861 ctgttcctga gcggcacgta gtacagctgc gtcgggaagt ccgcttcgat caacgcaacg
     1921 accttgttga ggtcgagtag gcgcagatct ggattggccg tcgcggcgta gcggtcccac
     1981 gctgcgcgca cgatctccga agcctgcgcc gcgctcttcg tgacctcgag cacgtaacga
     2041 tgcgcgtcgc cgacgggtgc ctcgtgcgtg ccgagcttct cgagcagcgg cttctcttgc
     2101 gcgaacacct cgcgctggaa cgagtcggga tccacgaaca cgagcggcac gtgccgttcg
     2161 gctttgaccg cgagcgtctg gctcgcggac acgttcacga tcaggttgtc gcgcgcgcct
     2221 t
//
LOCUS       DATCUD010000376         1765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46228, whole genome shotgun sequence.
ACCESSION   DATCUD010000376 DATCUD010000000
VERSION     DATCUD010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46228"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VIQ99_05555"
     CDS             <1..771
                     /locus_tag="VIQ99_05555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009019139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEY9182643.1"
                     /translation="DGHVQRWRIERPGGLDGTSIEIVGRAAGVTDVLARVERLDGSAQ
                     VESLPPGQASFVVEPGLGLRQTAVTYLVLGIEHILGGVDHLLFVLSLLLIVRGAKRIV
                     VTITAFTVAHSLTLVGATLKLVHMPGPPVEAAIALSIVFVAAEAVRGARGTPGPMARA
                     PWVVAFVFGLLHGFGFAGALAEIGLPQNAIPVALLTFNVGVEAGQLLFVGALALAGWA
                     LHALLGTRREWARWSIVLPSYSIGTVAMFWVAERVASF"
     gene            complement(1014..>1765)
                     /gene="fusA"
                     /locus_tag="VIQ99_05560"
     CDS             complement(1014..>1765)
                     /gene="fusA"
                     /locus_tag="VIQ99_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007080650.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY9182644.1"
                     /translation="QETGQTVLKGMGELHLEVTIDRMRTELGVEANMGRPRVSFREAF
                     GMPVELVYTHKKQSGGSGQYAEVKMVFEPLANGAGVEFSDEVVGGRIPREFIPSVEHA
                     ILTECKRGQVAGYEVVDFKARLIDGKYHDVDSSALAFEIAGRACFREAHKSSRPKLLE
                     PIMRIEVVTEADYLGTIIGDVNRRRGSVTEQGQKGTQATVQGFVPLSEMFGYINFLRS
                     ATSGRGTFTMEFAHYAEVPTGLVQKLMEAEA"
BASE COUNT          255 a          563 c          608 g          339 t
ORIGIN      
        1 gacggtcacg tgcagcgctg gcggatcgag cgtccgggcg gcctggatgg cacctcgatc
       61 gagatcgtcg gccgcgcggc cggcgtgacc gatgtgctcg cgcgcgtgga gcgcctcgac
      121 ggcagtgccc aagtcgaaag cctgccgccc gggcaggcga gtttcgtcgt cgagccgggc
      181 ctcggcctta ggcagacggc cgtgacttat ctcgtgctcg gaatcgagca cattctcggc
      241 ggcgtcgatc atctgttgtt cgtgctgtcc ttgctgctga tcgttcgcgg cgcgaaacga
      301 atcgtcgtta cgataacggc gttcaccgtt gcgcacagcc tcacgttggt tggcgctacg
      361 cttaagctcg tgcatatgcc gggtccaccg gtggaggcgg cgattgcgct cagcatcgtg
      421 ttcgtcgctg ccgaagcggt gcgcggcgct cgcggcacgc cgggtccgat ggcccgggca
      481 ccgtgggtag tggcgttcgt gttcggcttg ctacacggct tcggtttcgc cggcgcgctc
      541 gccgaaatcg gccttccgca aaacgccatc ccggtcgcgt tgcttacgtt caacgtcggc
      601 gtcgaggcgg gtcaattgtt gttcgtcggc gccctggctc tggcgggctg ggcgctgcat
      661 gcgttgctcg gaacgcgacg cgagtgggcg cgttggagca tcgtgttgcc gtcctactcg
      721 atcggcaccg ttgcgatgtt ctgggtcgcg gagcgcgtcg cgtcgttttg agggtcgtat
      781 atcaatcgtg cgtcgcgctc gagtctgcgt ccgcgcgagc cggtgaccca cgccgaaatg
      841 gtcggggacg tcgcacaggt gccgcgctgg cgtgccgaga gaccggaacg agtctaacgc
      901 ccgtcgcttt cagcgtgtca acaccagtgg gaccgaaacg acgagaaaag cgcagcgggt
      961 gagcgcgccg ccgctcgccg tgccgtcgca ggcgagcggc tgtctggcgg cgatcaggcc
     1021 tcggcctcca tgagcttctg cacgaggccc gtcggcactt cggcgtagtg cgcgaattcc
     1081 atcgtgaacg tgccgcggcc gctcgtcgcc gagcgcagga agttgatgta gccgaacatc
     1141 tcggacagcg gcacgaagcc ttgaaccgtg gcttgcgtgc ccttctggcc ttgctcggtc
     1201 accgagccgc ggcggcggtt cacgtcaccg atgatcgtgc cgagataatc ggcctccgtg
     1261 acgacctcga tgcgcatgat cggctcgagc agcttcggcc ggctcgactt gtgcgcctcg
     1321 cggaagcagg cacggcccgc gatctcgaat gcgagcgcgg acgagtcgac atcgtggtac
     1381 ttgccgtcga tcagacgcgc cttgaaatcg acgacctcgt agccggcgac ctgaccgcgc
     1441 ttgcactcgg tcaagatcgc gtgctccacg gagggaatga attcgcgcgg gatgcggccg
     1501 ccgacgacct cgtccgagaa ttcgacgccg gcgccgttcg cgagcggctc gaagaccatc
     1561 ttcacttcgg cgtactgacc ggaaccgccc gactgcttct tgtgcgtgta gacgagctcg
     1621 acgggcatgc cgaacgcttc gcggaagctg acgcgcggcc ggcccatgtt ggcttcgacg
     1681 ccgagctcgg tgcgcatgcg gtcgatcgtg acctcgaggt gtagctcgcc catgcctttg
     1741 agcacggtct ggcccgtctc ttggt
//
LOCUS       DATCUD010000377         2333 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53386, whole genome shotgun sequence.
ACCESSION   DATCUD010000377 DATCUD010000000
VERSION     DATCUD010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53386"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..440)
                     /locus_tag="VIQ99_05565"
     CDS             complement(72..440)
                     /locus_tag="VIQ99_05565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008518452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9182645.1"
                     /translation="MPIYLQLMEQVKHAIETGALRAGEQLPGIRPLAEELVINVNTVA
                     KAYRELEREGVIELRHGAGAFVAGAALKARGADKFRAAQTLVAATVEKLRTRGLSDEE
                     IRRLFEAELAGLTRAGGQGV"
     gene            669..1133
                     /locus_tag="VIQ99_05570"
     CDS             669..1133
                     /locus_tag="VIQ99_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018061168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182646.1"
                     /translation="MTDLFATRHDVAEFIQLFEGGQLPRARWTHRGHLVAGFWYLSLH
                     PFDEALGIVRARIRRHNEAVGTPNTDSNGYHETITRLYLIGIDAHRAAHDHLSFERSL
                     AALLTSPLADSGWPLAFYSRERLFSVEARRGWIAPDLRSLPAAASPARRGAD"
     gene            1138..2049
                     /locus_tag="VIQ99_05575"
     CDS             1138..2049
                     /locus_tag="VIQ99_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019184429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9182647.1"
                     /translation="MRPATKALLTIHFCVLLWGFTAILGKLIALPALPLVWWRIVIVL
                     AALALVPRVWRSLRALSPRIALIYAGIGVLVALHWLTFYGAIKLANASVAATCIALAT
                     PFTAIVEPWLTRSRFSPRDLLLGIAVLPGVALVVGGIPQSMRLGVAIGALAALLVAVF
                     GSLNKRFVHDGDPLMVTGLELGAGLVALTVLAPVMPWIMSQLSGPLFALPSAHDAWLL
                     LALALACTLLPFTLSFVALRHMSAFSAQLAVNLEPVYAIVLAIVLLGEQRELTAQFYF
                     GVAIILLVVLAHPWFARPREVERVSAV"
     gene            2065..>2333
                     /locus_tag="VIQ99_05580"
     CDS             2065..>2333
                     /locus_tag="VIQ99_05580"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012375499.1"
                     /note="catalyzes the formation of tyrosyl-tRNA(Tyr) from
                     tyrosine and tRNA(Tyr); Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY9182648.1"
                     /translation="MHILDELVARGLVADVTDRAGLAALLDQGPVTFYAGYDPTSPSL
                     HVGNLVPVMGLSWLQRCGGTPIILVGGGTGMVGDPSGKRNERPMLS"
BASE COUNT          306 a          820 c          748 g          459 t
ORIGIN      
        1 ggtccagacc cgcaaccgcc tcgacaccgt cgaagctctt gcgcaggtcc gctatctcga
       61 tcacgttctc ctcagacacc ttgccctcct gccctcgtca gcccggcgag ctccgcttcg
      121 aacagccgcc gaatctcctc gtcgctcaac ccgcgtgtgc gcagcttctc gacggtggca
      181 gcgacgagtg tctgcgccgc gcggaacttg tcggccccgc gggccttcag cgctgcgccc
      241 gcaacgaaag cgcccgcgcc gtgcctgagc tcgatgacgc cctcgcgctc gagctcccga
      301 tacgccttcg caaccgtgtt cacgttgatc actaactcct ccgcaagcgg tcggatgccg
      361 ggcaactgct cacccgcccg aagcgctccg gtctcgatcg cgtgcttgac ctgctccatg
      421 agctgcaggt agatcggcac gcctagggat ggattcggtt tgacgatcat tggtcccaac
      481 tgtgctatct atgtagcaca gtggtactgt gctactcatg tagtactgtt gtcaagcggc
      541 cccatcccgg aagccgccgt cggcgaggat tgctcggggg gcggcctgtt tttccgcgca
      601 acgcctcgcg tacaatctgc gccccgtcgc agccgcggcg cgccgccgaa ccgtcctcgc
      661 ctacgccgat gaccgaccta ttcgccaccc gccacgacgt cgcggagttc attcagctgt
      721 tcgaaggcgg gcagctgccg cgcgcccgct ggacgcaccg cggacacctc gtcgcggggt
      781 tctggtacct cagccttcat ccattcgacg aggcgctcgg catcgtgcgt gcacgaatcc
      841 gccgtcacaa cgaggcggtc gggacgccga acacggattc gaacggctac cacgagacga
      901 tcacgcggct gtacctgatc gggatcgacg cgcatcgcgc tgcgcacgac cacctttcgt
      961 tcgagcgtag cctcgcggcg ctcctgacct cgccgttggc cgacagcggc tggccgctcg
     1021 cgttctattc acgagagcgc ctgttctcgg tcgaggcgcg acgcggatgg atcgcgccgg
     1081 atctccggtc gttgccggcg gcggcatcgc ccgcacgcag gggggcggac tgaatcgatg
     1141 cgtcccgcga ccaaggcgct gctcacgatc cacttctgcg tgctgctgtg ggggttcacc
     1201 gcgatcctcg gcaagctgat cgcgctgccg gcgctgccgc tagtctggtg gcgcatcgtg
     1261 atcgtgctgg cggcgcttgc gctcgtgccg cgcgtctggc gctcgctgcg cgcgctctcg
     1321 ccccgaatcg ccctgatcta cgccggtatc ggcgtgctcg tcgcgctgca ttggctcacg
     1381 ttctacggcg cgatcaagct cgcgaatgcg tcggtggccg cgacctgcat cgcactggcg
     1441 actccgttca cggcgatcgt cgagccgtgg ttgacgcgct cgcgtttttc gccgcgcgac
     1501 ctgctgctcg gcatcgcggt attgccaggc gttgcgctcg tcgtcggcgg tattccacag
     1561 agcatgcgct tgggcgtcgc gatcggcgcg ctcgcggcat tgctcgtcgc ggtgttcggg
     1621 tcgttgaaca agcgcttcgt gcacgacggc gatccgttga tggtcacggg gctggagctc
     1681 ggcgccggtt tggtcgcgct gaccgtgctg gcgcccgtga tgccgtggat catgtcgcag
     1741 ctctcgggac cgttgttcgc cctaccctcg gcccacgacg cctggctgct gctcgcgctg
     1801 gcactcgcct gcacgctgct gcccttcacg ctgtcgttcg tggcgttacg gcacatgagc
     1861 gcgttctcgg cgcagctcgc cgtgaacctg gagcccgtgt acgcgatcgt gctcgcgatc
     1921 gtattgctcg gcgagcaacg cgagctgacc gcgcagttct acttcggcgt cgcaatcatc
     1981 ttgctcgtcg tgctcgctca tccgtggttt gcacgcccgc gcgaagtcga gcgggtatcg
     2041 gcggtttgag gtagcctttg cgccatgcat attctcgatg agctggtagc gcgcggcctc
     2101 gtggccgacg tcacggaccg ggccgggctc gccgcgttgc tcgatcaagg gcccgtgacg
     2161 ttctacgccg gttacgatcc gacctcgccg agcctgcacg tcggcaacct ggtcccggtg
     2221 atggggctgt cctggctgca gcgctgtggc ggcacgccca tcatcctggt cgggggcggc
     2281 accggcatgg tcggcgaccc gtccggcaag cggaacgagc gccccatgct gtc
//
LOCUS       DATCUD010000378         2148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17985, whole genome shotgun sequence.
ACCESSION   DATCUD010000378 DATCUD010000000
VERSION     DATCUD010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17985"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VIQ99_05585"
     CDS             <1..254
                     /locus_tag="VIQ99_05585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010464342.1"
                     /note="extradiol catechol dioxygenase that catalyzes the
                     oxidative cleavage of substituted catechols; part of the
                     bacterial aromatic compound degradation pathway; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase"
                     /protein_id="HEY9182649.1"
                     /translation="GPRAGLINKKFDTAFLDGLARDPERLASIPPLEYLRDAGAEAIE
                     LVMWLVMRGALGPRVREVYRFYHVPASSTAVGHIILEAA"
     gene            complement(273..782)
                     /locus_tag="VIQ99_05590"
     CDS             complement(273..782)
                     /locus_tag="VIQ99_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020598944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEY9182650.1"
                     /translation="MVASVDFFIAKPDNSIAWLQTADEYDKGTTFEDATAFVKTIGCY
                     VMGAKTYEHARVLGWPYGDTPTIVLTHRPLTAERASVEFYSGDLRELVNRRLKPKYKT
                     IWVVGGALVAKDFLRANLIDDIRIGIMPILLGEGTPFVELGCEQRLHLKDVTGFKDGM
                     VEPWYEVKK"
     gene            complement(825..1586)
                     /locus_tag="VIQ99_05595"
     CDS             complement(825..1586)
                     /locus_tag="VIQ99_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182651.1"
                     /translation="MKIRPASALGLTLVLVTAAAQETNLTRSEVAALKAKIVTVQQAM
                     GEDPAGYIKESEDFDLPTEANPARDGKFWPITSGVSLRYTDRGTVESQDSIEKANAEF
                     QQKYAAALASGNPEAITKMVEEMQRIQTQAMAAAANPAAKKDPMSVYVQLNQNPTVGI
                     DPDAVVLEQAGVIVLRDTNVSNGRGNVTVYVDPVALKATQELSKIELRTADDGMPNKT
                     GVYHVVIQLNGAVADAEAWAKTFDYDAILGVIDPR"
     gene            complement(1680..>2148)
                     /locus_tag="VIQ99_05600"
     CDS             complement(1680..>2148)
                     /locus_tag="VIQ99_05600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182652.1"
                     /translation="FKRLVQRAAAFDWHVVLHFDAKDLLEFDSMLRTLPVPFIIDHMG
                     RVPTKDGLDQEPFKILLNVARMENCWVKICGAERISSQGPPFTDAVPFAQAILNVAPD
                     RALWGTDWPHPNIKKHMPNDGDLVDLIPLFMPDAALQRRVLVDNPQRLYGFMG"
BASE COUNT          346 a          709 c          669 g          424 t
ORIGIN      
        1 aaggcccgcg cgcgggactc atcaacaaga agttcgacac ggcttttctc gacggcctcg
       61 cacgcgatcc cgagcgcctc gcgagcattc caccgctcga atacctacgc gacgcaggcg
      121 ccgaggccat cgagctcgtg atgtggctgg tcatgcgcgg ggcgcttggg ccacgtgtgc
      181 gcgaggtcta ccgcttttat cacgtgccgg cgtcatcgac cgcggtcggc cacatcatcc
      241 tcgaagcggc gtagcccgag gcgtgccgcg ttctattttt tgacctcgta ccagggctcg
      301 accatcccgt ccttgaagcc cgtgacgtcc ttcaggtgca gccgttgctc gcacccgagc
      361 tcgacgaacg gcgtaccctc gccgagcagg atcggcatga tgccgatcct gatgtcgtcg
      421 atcaggttcg cacgcaggaa gtccttcgcg accagggcgc cgccgacgac ccagatggtc
      481 ttgtatttcg gcttcaggcg gcgattcacg agctcgcgca aatcgcccga gtagaactcg
      541 acgctggcgc gctcggccgt gaggggccgg tgcgtcaaca cgatcgtcgg tgtgtcgccg
      601 tacggccagc cgagcacgcg cgcatgctcg taggtcttcg cgcccatcac atagcagccg
      661 atcgtcttca cgaacgcagt cgcgtcctcg aaggtcgtgc ccttgtcgta ctcatcggcc
      721 gtctgcagcc acgcgatgct gttgtcgggc ttcgcgatga agaagtccac gctcgcaacc
      781 atgtggagcg taacggttga ggcgagcgac ttcacgggca ccgctcagcg cggatcgatg
      841 actccgagga tcgcgtcgta atcgaacgtc ttggcccacg cctcggcatc ggccacggcg
      901 ccgttcagct ggattacgac gtggtacacg ccggtcttgt tcggcatgcc gtcgtcggcg
      961 gttctgagct cgatcttgga cagctcctgc gtcgccttca acgccacggg atcgacgtac
     1021 acggtgacat tacccctgcc gtttgacacg ttcgtgtcgc gcaacacgat cacgcccgct
     1081 tgctcgagca cgaccgcgtc cgggtcgatg ccgaccgtcg gattctggtt cagctgcacg
     1141 tacaccgaca tcgggtcctt cttggcagcc gggttcgcgg cagccgccat cgcctgcgtc
     1201 tgtatccgct gcatctcttc gaccatcttc gtgatggcct cggggttgcc gctcgcgagc
     1261 gcggccgcgt acttctgctg aaactccgca ttggccttct cgatgctgtc ttgactctcc
     1321 acggtgccgc gatccgtgta gcgcaacgaa acgccggacg tgatcggcca gaacttcccg
     1381 tcccgtgccg ggttggcctc cgtcggcaga tcgaagtcct cggactcctt gatgtagccg
     1441 gccgggtcct cgcccatggc ctgctggacg gtcacgatct tggctttcag cgcggcgacc
     1501 tcgctgcgtg tgagattcgt ctcttgagcg gctgccgtta ccagaaccaa ggtgaggccg
     1561 agagcgctag cggggcggat tttcattttg ttctcctgct ggttgcgcga ggggtggcga
     1621 acgccgatcc cgatggtagc gcacccttcg gcgctctcca atccggcggc cgcgggcgac
     1681 tagcccatga aaccgtacag ccgctgcggg ttgtcgacga gtactcgacg ctgcagcgcc
     1741 gcgtcgggca tgaacaatgg gatcaagtcg acgagatcgc cgtcgttcgg catgtgcttc
     1801 ttgatgttcg gatgcggcca gtccgtgccc cacagcgcgc gatccggagc gacgttcaag
     1861 atcgcctgcg cgaacggcac ggcgtccgtg aacggcgggc cctgcgacga gatccgctcg
     1921 gcgccgcaga tcttgaccca gcagttctcc atgcgcgcga cgttcagcaa gattttgaac
     1981 ggctcctggt cgagaccgtc cttcgtcggc acgcgaccca tgtgatcgat gatgaacggc
     2041 acgggcagtg tgcgcagcat cgagtcgaac tcgagcaggt ccttcgcatc gaagtgcagc
     2101 acgacgtgcc agtcgaacgc ggccgcgcgc tgcacgagcc gcttgaat
//
LOCUS       DATCUD010000379         1567 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_17987, whole genome shotgun sequence.
ACCESSION   DATCUD010000379 DATCUD010000000
VERSION     DATCUD010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17987"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="VIQ99_05605"
     CDS             complement(<1..551)
                     /locus_tag="VIQ99_05605"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY9182653.1"
                     /translation="MTLLPGPSVVALGLLGSTIAAAQPDLAWIDREALDAGEVLIYAE
                     RSDRPLTVEVKLAAEVDAPPTAIFDVLKACEVAPEYVPNVQSCRRLEQLDGGRADLFV
                     QVIKPIFFVPSFEHVFRLDYTPHTRIDVRRVSGPIAYMEGSWWLLPQDDGRILLVYEL
                     ALDPGMPIPRFMVRATLKRDLPKV"
     gene            complement(562..1413)
                     /locus_tag="VIQ99_05610"
     CDS             complement(562..1413)
                     /locus_tag="VIQ99_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9182654.1"
                     /translation="MRLMSFDRNGRAGFGIVVGDAVVETTTRLAGARTLREALAAGAL
                     PELARLAGGKPDFALGEVTFAPVIPDACAKLLCVGVNYMPHIREMGRERPDKPVIFTR
                     FADSIVGHGRPLLKPVASEQFDFEGELAVVIGKRARRVTKERALDYVAGYTCFNDGSV
                     RDYQRHSPQFTPGKNFHASGAFGPWLVTADEIPDPRKLKLTTRLNGEVVQHESVGELC
                     FDVPHLIEYCSIWTQLEPGDVIVTGTPGGVGAGRKPPLWMKPGDTIEVEITGIGTLRN
                     PVVAEAA"
BASE COUNT          242 a          537 c          521 g          267 t
ORIGIN      
        1 accttcggca agtcgcgctt caaagttgcg cgcaccatga accgcggaat cggcatcccc
       61 gggtcgagcg cgagctcgta tacgagcaga atccgcccat cgtcctgcgg gagcagccac
      121 cagctgccct ccatgtacgc aatcggtccg ctcacgcggc gcacgtcgat ccgcgtatgt
      181 ggcgtgtagt cgagtcgaaa gacgtgctcg aagctcggca cgaagaagat cggcttgatc
      241 acctgcacga acagatctgc gcggccgccg tcgagctgct cgagccgcct gcaactctgc
      301 acgttcggca cgtactcggg cgcaacctcg cacgctttca gcacgtcgaa gatcgcggtc
      361 gggggcgcat cgacctccgc cgcgagcttg acctccacgg tcagcggccg gtcgctgcgt
      421 tccgcgtaga tgagcacctc cccggcatcg agggcctcgc ggtcgatcca ggcgagatcg
      481 ggctgcgccg cggcgatcgt gctgccgagc agcccgagcg cgacgacact gggccccggc
      541 agtaacgtca tcggtttcgc gtcacgcggc ctcggccacg actggattgc gcagcgtgcc
      601 gatgccggtg atctcgacct cgatggtgtc cccgggcttc atccacaacg gcggcttgcg
      661 acccgcgccg acgccgcccg gtgtgcccgt gacgatgacg tcgccgggct cgagctgcgt
      721 ccagatcgag cagtactcga tgaggtgtgg tacgtcgaag cagagctcgc cgacgctttc
      781 gtgctgcacg acttcgccgt tcaaccgtgt cgtaagcttg agcttgcgcg ggtccgggat
      841 ctcgtcggcc gtcacgagcc agggaccgaa cgcgccgctc gcgtgaaaat tcttgccggg
      901 cgtgaattgc ggcgagtgtc gctgatagtc gcgcacgctg ccgtcgttga agcaggtgta
      961 gcccgcgaca tagtcgagcg cacgttcctt ggtcacgcgc cgcgcgcgtt tgccgatcac
     1021 gacggcgagc tcgccttcga agtcgaactg ctccgaggcc acgggtttca gcaacggccg
     1081 gccgtggccc acgatgctgt cggcgaagcg cgtgaagatc acgggcttat cgggccgctc
     1141 ccggcccatt tctctgatgt gcggcatgta attgacgcct acgcacagga gcttcgcgca
     1201 cgcatccggt atcacgggcg cgaacgtgac ctcgccgagg gcgaagtcgg gcttgccgcc
     1261 ggcgaggcgc gcgagctcgg gcaacgcgcc ggcggccagc gcctcgcgca gcgtacgcgc
     1321 gcctgcgagc cgcgtcgtcg tttcgacgac cgcgtcgccg acgacgatgc cgaagccggc
     1381 ccggccgttc ctgtcgaagc tcatgagacg catcgcgctt ctccttcaat gcgcgccgcg
     1441 agtggcggcg tcggcacgca gctgttcgac ggcggccttg agcgtgaggc tcgtttggtt
     1501 ctgtgatccg aacctgcgca gcgccacggt gcgctccgcg acctcgcgct tgcccgcggc
     1561 gaggatc
//
LOCUS       DATCUD010000380         3469 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60270, whole genome shotgun sequence.
ACCESSION   DATCUD010000380 DATCUD010000000
VERSION     DATCUD010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60270"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..943)
                     /gene="hemE"
                     /locus_tag="VIQ99_05615"
     CDS             complement(<1..943)
                     /gene="hemE"
                     /locus_tag="VIQ99_05615"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF013381.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEY9182655.1"
                     /translation="MGFEMTNDKLLLKAIRREPVPRRPLWIMRQAGRYLPEYRAFREK
                     HTFKELAGHAELAAEVTLMPLKRYPLDAAIVFADIMSPMPSLGIEFDFAPGPIVANPI
                     RDAAAIARLRQPAKEEIAPEVIAALKLTRAALPKSTALLGFCGAPWTLAAYLVEGKGT
                     KDFPTLRAFAAAEPALLDSLLGRLSSLMGEYLLQQAAAGADAVQIFDSWAGLLSRASW
                     ERLIRPHLESLLTTVGKAGIPRILFLQNAPHLMDAYASLPAEVLGVDWRIDLPDLQRR
                     YPQRAVQGNLEPAILTAGPKATRAAAEELLATTAARGH"
     gene            complement(943..1665)
                     /locus_tag="VIQ99_05620"
     CDS             complement(943..1665)
                     /locus_tag="VIQ99_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013176743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182656.1"
                     /translation="MKEPARILVVDDEQHLAAGIRENLEAEGYRTEVAHDGLAGLERL
                     RAEPFDLVVLDVMMPKMDGVELCAELRREGVQTPVLFLTVKGGAEDRVRGFEAGGDDY
                     LSKPFHLKELLLRVAAILRRSSWYQSASGALTFGGNRIDFKTYEARAWDGSPHSLTHK
                     EAMILRALADRPGEIVTREEILDRVWGYEVFPSTRTIDNFIVRLRKRFERNPEVPVHF
                     HTVRGVGYRFTPEPQAGEGSSE"
     gene            complement(1662..2624)
                     /locus_tag="VIQ99_05625"
     CDS             complement(1662..2624)
                     /locus_tag="VIQ99_05625"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY9182657.1"
                     /translation="MSARRDPTQLMQIGFLLLLLISAATVGWWMYDHVHYARSVEQRF
                     ATDPVVAEDSAARINRVLWEGGFFLVVLIGGMAVLTRTLRHDAELRRRQQNFLAAVSH
                     EFKSPLASIQLAAETLVMRAREDDSKRLGARILEDGERLLRMIDNLLETTRLEEGRQT
                     LSPQPTNLCGAANAAVAAIAERARSSGVNVTIAIPEDLTLTVDPLVVETGLRNLLDNA
                     LKSCVAAKSHNIAVEAGRDASGVALAVSDDGLGFHPTDAGKIFEKFQRLGDELKRATP
                     GTGLGLYIVRRLVELSGGTVEARSDGPGKGAKVTLRWPTEGSVS"
     gene            complement(2642..>3469)
                     /locus_tag="VIQ99_05630"
     CDS             complement(2642..>3469)
                     /locus_tag="VIQ99_05630"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9182658.1"
                     /translation="LATFGQPTSKGVPNDLAALTRVLPLDDEAAAEHLFAAEGARIAA
                     VIIEPVPANNGLLLQRPEFLKTLRALCTKHGALLIFDEVITGFRLGAGGAAEHFGLRP
                     DLATFGKVIGGGMPVGAFAGPRKIMQQLSPEGGVYQAGTLSGNPVAMTAGLTTLRMLK
                     KENGWKRLETLGAYLEEQLTSALAEAPLKAKLCRLGSMFWIAWLTDRAPRSAEALDAN
                     AAKVYARVFHSLLEQGIALAPSAFEIAFLSLAHTRRDIERLAEGLRVALTALPADVE"
BASE COUNT          557 a         1179 c         1148 g          585 t
ORIGIN      
        1 tatggccgcg cgccgcggtc gtcgcgagaa gctcctcggc cgccgcgcgc gtggctttcg
       61 gcccggcggt caggatcgcg ggctcgaggt tgccttgcac ggcacgttgc gggtagcggc
      121 gctgaaggtc gggcaaatcg atgcgccagt cgacgccgag cacctcggcc ggcaggctcg
      181 cgtacgcgtc catcaagtgc ggcgcgttct gcagaaacag gatccttggg atcccggctt
      241 tgccgaccgt ggtcagcaac gattcgaggt gaggacggat caaccgttcc cagctcgccc
      301 gcgagagcag cccggcccac gagtcgaaga tttgtaccgc gtcggcgccg gccgcggctt
      361 gctgcaacag gtactcgccc atgaggctcg acagccggcc cagcaacgag tcgagcagcg
      421 cgggctccgc tgcggcgaac gcgcgcagcg tcgggaagtc ctttgtgccc ttaccctcga
      481 cgagataagc cgcgagtgtc cacggcgcac cgcagaagcc gagcagcgcg gtgctcttcg
      541 gcaacgccgc gcgcgtgagc ttcagcgctg cgatgacctc gggcgcgatt tcctctttgg
      601 ccggttggcg cagtcgcgcg atcgcggccg catcgcgaat cgggttcgcg acgatggggc
      661 ccggagcgaa atcgaactcg attccgagcg aaggcatagg gctcatgatg tcggcaaaga
      721 caatggccgc gtcgagcggg tagcgcttca agggcatcag cgtgacttcg gccgcgagct
      781 cggcgtggcc tgcgagctcc ttgaacgtgt gtttctcgcg gaacgctcga tactcgggca
      841 gatagcggcc ggcctggcgc atgatccaga gcggccgacg cggcacgggt tcgcggcgga
      901 tggctttcaa caagagcttg tcgttcgtca tttcgaatcc catcactcgc tcgagccttc
      961 gcccgcttgc ggctccggcg tgaatcgata gccgacgccg cgcaccgtgt gaaagtgcac
     1021 gggaacctcg gggttgcgct cgaagcgctt gcgcaggcgg acgatgaagt tgtcgatcgt
     1081 gcgcgtcgac ggaaatactt cgtagcccca cacgcggtcg agaatctcct cgcgagtgac
     1141 gatctcgccg ggcctatctg cgagcgcgcg cagaatcatg gcctccttgt gcgtcaacga
     1201 gtgcggcgag ccgtcccacg cgcgcgcttc gtaggtcttg aagtcgatgc ggttgccgcc
     1261 gaacgtcagc gcgccgctcg cggactggta ccacgagctg cggcgcaaga tcgccgcgac
     1321 acgcaacagc agctccttca agtgaaacgg cttcgacagg tagtcgtcgc cgccggcctc
     1381 gaagccgcgc acacggtcct cggctccgcc tttcacggtc aggaacagca ccggcgtttg
     1441 cacgccctcg cgcctgagct ccgcgcacaa ctcgacgccg tccatcttcg gcatcatgac
     1501 gtcgagcacg acgagatcga acggctctgc gcgcagccgc tcgagccccg ccaagccgtc
     1561 gtgcgcgact tcggtgcgat agccttcggc ctcgagattc tcgcgaatcc ccgcggcgag
     1621 atgctgctcg tcgtcgacga cgagaatgcg agccggttct ttcacgacac cgatccttca
     1681 gtgggccacc gcagtgtcac cttggcgccc ttgcccggac cgtcgctgcg cgcctcgacc
     1741 gtgccgcccg agagctcgac gagccgccgg acgatgtaaa ggcccaagcc cgttcccggc
     1801 gtcgcgcgct tgagctcgtc gccgagccgc tgaaattttt cgaagatctt gccggcgtcc
     1861 gtaggatgga agcccaagcc gtcgtcgctg acggccaggg cgacgccgga cgcgtcgcgc
     1921 ccggcttcga cggcgatgtt gtgcgatttc gcggcgacgc aggacttcag cgcgttgtct
     1981 agcagattgc gcaggcccgt ctcgacaacg agcggatcga ccgtgagcgt cagatcctcg
     2041 ggaatggcga tcgttacgtt cacaccgctc gagcgcgcac gctcggcgat cgcggcgacg
     2101 gccgcgttgg ccgcgccgca gaggttcgtg ggctgcgggc tcagcgtctg ccgcccttcc
     2161 tcgagacgcg tcgtctcgag caggttgtcg atcatccgta acaggcgctc gccgtcctcg
     2221 aggattcgcg cgccgagccg tttgctgtcg tcctcgcggg cgcgcatcac gagcgtctcg
     2281 gctgcgagct gaatgctagc gagcgggctc ttgaactcgt gcgacacggc ggcgaggaaa
     2341 ttctgctgcc gacgccgcag ctccgcgtcg tggcgcagcg tgcgcgtcag gacggccatg
     2401 cctccgatca aaacgaccag gaaaaacccg ccttcccaga gcacgcgatt gatccgagcg
     2461 gcgctgtctt ccgcgacgac cggatccgtc gcgaagcgct gctcgacact gcgtgcgtag
     2521 tgcacgtggt cgtacatcca ccagcccacg gtcgccgcgg agatcagcag caacagcagg
     2581 aagccgattt gcatcagctg ggtcggatcg cgtcgtgcgc tcatgtccgc gccccccctc
     2641 gctattccac gtccgcgggc agtgcagtga gcgccacgcg caacccttcg gcgagccgtt
     2701 cgatatcgcg gcgcgtgtgc gcgagcgaca ggaacgcgat ctcgaacgca gacggcgcga
     2761 gcgcgatgcc ttgctcgagc agcgaatgaa acacgcgcgc gtagaccttc gctgcgttcg
     2821 cgtcgagcgc ttccgcggag cgcggcgccc gatccgtgag ccacgcgatc caaaacatcg
     2881 agccgagccg gcacagcttc gctttcagcg gcgcttcggc gagcgcgctc gtgagctgct
     2941 cctcgagata cgcgccgagc gtttcgagtc gcttccagcc gttttccttt ttcagcatcc
     3001 gcaacgtcgt caagcccgcg gtcatcgcga ctggattgcc cgacagcgtg ccggcttgat
     3061 acacgccgcc ttccggcgac agctgctgca tgattttgcg cgggcccgcg aaggcgccga
     3121 ccggcattcc gccgccgatg accttgccga acgtcgcgag gtcgggacgt agcccgaagt
     3181 gctcggcggc tccgcctgcg ccgagccgaa agcccgtgat gacctcgtcg aagatcagca
     3241 gcgcgccgtg cttcgtgcac agcgcgcgca gtgtcttcag gaattcgggc cgctgcagca
     3301 gcaggccgtt gttcgcgggc accggctcga tgatcacggc cgcgatccgg gcgccttcgg
     3361 ccgcaaatag gtgctcggcc gcggcttcgt catcgagcgg cagcacgcgc gtgagcgcgg
     3421 cgagatcgtt cggcacgccc ttcgacgtcg gctggccgaa cgtcgcgag
//
LOCUS       DATCUD010000381         1554 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88937, whole genome shotgun sequence.
ACCESSION   DATCUD010000381 DATCUD010000000
VERSION     DATCUD010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88937"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..687)
                     /gene="ccsA"
                     /locus_tag="VIQ99_05635"
     CDS             complement(<1..687)
                     /gene="ccsA"
                     /locus_tag="VIQ99_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011828810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HEY9182659.1"
                     /translation="MIPEFGQFALALVQGTVPLVGAALGRADWMALARPAAAGQFVFV
                     AIAFGVLVYAFLSDDFSVLFVAQHSNSALPVFYKATAAWGGHEGSMLLWIAVLAVWTM
                     AVAAGSRSQPQEFASRVLGVLGIVSAGVIAFAFITSNPFTRLIPTPADGNDLNPLLQD
                     PGMIFHPPTLYVGYVGMAVPFAFAVAALLTGRLDKDWARWTRPWTVVAWLFLTAGITL
                     GSWWAYYELGW"
     gene            complement(684..1118)
                     /gene="ccmE"
                     /locus_tag="VIQ99_05640"
     CDS             complement(684..1118)
                     /gene="ccmE"
                     /locus_tag="VIQ99_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011828811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEY9182660.1"
                     /translation="MKSRTQRKLFMVLVLAGITLAGYLTYRALQENMLYFFSPSQVAA
                     GEAPQRTFRLGGMVVDGSLKREPGTLNVTFVVTDNVHSVPVKYDQLLPDLFREGAGAV
                     VIGRLNDNGEFVGEQVIAKHDENYMPPEVAEALEKARAAQER"
     gene            complement(1115..1306)
                     /gene="ccmD"
                     /locus_tag="VIQ99_05645"
     CDS             complement(1115..1306)
                     /gene="ccmD"
                     /locus_tag="VIQ99_05645"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010482948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HEY9182661.1"
                     /translation="MSEFFSMNGDGAYVWSAYGLTLLVLILNVWLVRAKRRAALQRAR
                     ELAGQAEVPRKQPTVRRLQ"
     gene            complement(1303..>1554)
                     /locus_tag="VIQ99_05650"
     CDS             complement(1303..>1554)
                     /locus_tag="VIQ99_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HEY9182662.1"
                     /translation="VGVVNVPIVHYSVEWWNSLHQTSTLFDEGGPAMTTEMLIPFLIM
                     VLAFTLTFYWLLLRRLQAEIIEREGDARWVRDLMGEGGR"
BASE COUNT          304 a          532 c          482 g          236 t
ORIGIN      
        1 ccagccgagc tcgtaatacg cccaccaact accgagggtg atgccggcgg tcaagaacag
       61 ccaggcgacg acggtccacg gccgagtcca cctcgcccag tccttgtcga gccgccccgt
      121 cagcagcgcg gcgacggcga acgcgaacgg cacggccatg ccgacgtacc cgacgtagag
      181 cgtcgggggg tggaagatca tgcctgggtc ctggagcaag ggattcaggt cgttgccgtc
      241 ggccggcgtc ggaatcagcc gcgtgaacgg attcgacgtg atgaaggcga acgcgatcac
      301 gcccgcgctc acgataccga gcacgccgag cacgcggctc gcgaactcct gcggctgcga
      361 gcggctgccg gcggcgacgg ccatcgtcca cacggccagc accgcgatcc agagcaacat
      421 cgacccttcg tggccacccc acgccgcggt cgccttgtag aagacgggaa gcgcagagtt
      481 cgaatgctga gcgacgaaca gaacgctgaa atcgtcgctc aagaacgcat acacgagcac
      541 gccgaacgcg atcgcgacga acacgaactg ccccgcggcc gcgggccgcg ccagcgccat
      601 ccagtcggca cgcccgagcg ctgcgccgac gagcggtacg gtgccttgca cgagcgcgag
      661 ggcgaattga ccgaactcgg ggatcatcgt tcttgcgccg cccgcgcctt ctcgagcgct
      721 tcggcgacct ccggcggcat gtagttctcg tcgtgcttgg cgatgacctg ctcgccgacg
      781 aactcgccgt tatcgttcaa gcgcccgatc acgaccgcac cggccccctc gcgaaacaga
      841 tccggaagca actggtcgta cttcacagga acggaatgca cgttgtccgt cacgacgaac
      901 gtgacgttca acgtgccggg ctcgcgcttc agactgccgt cgacgaccat gccgccgagc
      961 ctgaacgtac gctgcggcgc ctcgccggct gccacctgcg agggactgaa gaagtacagc
     1021 atgttctcct gcagcgcccg ataggtcaga taaccggcca gcgtgatgcc ggccagcacg
     1081 agcaccatga acagctttcg ttgcgttctc gacttcattg caggcgtcgc accgtgggtt
     1141 gcttacgcgg aacctcggcc tgtccagcga gctcgcgggc tcgctgcaga gcggccctgc
     1201 gcttggcgcg cacgagccac acgttcagga tcagcacgag cagtgtaagg ccgtacgcgg
     1261 accagacgta agcgccgtcg ccgttcattg agaagaattc actcaccgcc cgccctcgcc
     1321 catgagatcc cggacccatc gcgcgtcgcc ttcgcgctct atgatctcgg cctgcagtct
     1381 ccgcagcagc agccagtaga acgtcagcgt gaaggcgagg accatgatca ggaacgggat
     1441 caacatttcc gtcgtcatcg cggggccacc ttcgtcgaac agcgtcgacg tttggtggag
     1501 cgagttccac cattcgaccg agtagtgaac gatcgggacg ttgaccacgc cgac
//
LOCUS       DATCUD010000382         2728 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46271, whole genome shotgun sequence.
ACCESSION   DATCUD010000382 DATCUD010000000
VERSION     DATCUD010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2728
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46271"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VIQ99_05655"
     CDS             <1..219
                     /locus_tag="VIQ99_05655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182663.1"
                     /translation="LQGSQRILYTLMRPYDWHWSIKLAIMVLGSMPILLVSYHYLVRF
                     TWIGAILNGRRHPRTTKSPPADTAPAPG"
     gene            230..1153
                     /locus_tag="VIQ99_05660"
     CDS             230..1153
                     /locus_tag="VIQ99_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005663000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-CTERM sorting domain-containing protein"
                     /protein_id="HEY9182664.1"
                     /translation="MRLESFFAGSAALMLATVANAAGDRVLFIGNSFTFGAGSAVRFY
                     RSDAVTDLNDEGIGGVPALFESFTRQAGLDYDVALETRGGTGLDFHLAEKRDEITSRR
                     WDIVVAHGYSTLDADAPRNPAKLVATSRELAELLRDRNADVQLFLTATWSRADQVYPT
                     NGAWAGTAIDTMARDIRAAYDQAAAGAGASVIPVGEAWNRAIATGVADANPYDGIDAG
                     KLDLWTYDHYHASTHGYYLEALVIFGSVTGRDPRSLGERECSAFELGLSRTEVRALQQ
                     IAFDELATTRTLAQNAPPPPAEGNPQRCSVR"
     gene            1160..2605
                     /locus_tag="VIQ99_05665"
     CDS             1160..2605
                     /locus_tag="VIQ99_05665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010141517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEY9182665.1"
                     /translation="MNATAIDGNAQLVARNRLVINLLLVSSFVVILNETMMAVATPAL
                     MLSLGVTAGAAQWLTTAFLLTMAVGIPMTGFLLQRLHTRTVFMLAMTLFSAGTFVAAI
                     APGLPLLIGARVIQASGTAIMMPLLMTTIMTLVPPESRGKTMGLVSSVISVAPAIGPV
                     LSGAILNFLHWRWMFVLVLPIALFSLWLGWRRIENVTTPRDAPLDILSVILSAFAFGG
                     GVYGLSLLGAPPGPGNPPAGVPLVIGAVAMALFVWRQLVLQRTDSALLDLRVFRSRMF
                     TIALTVFALLMLTLFGTIILLPIYLQNVLGLNTLQSGLLLLPGALLMGRLGPPVGRAY
                     DRIGPTKLVVPGVIIVTAVLWAMTLLGTQSKWEFILAGHIVMCVGFALLFTPLFTVCL
                     SSVPPQLYSHGSAVLGSFQQVGGAAGVALFIAIMSGRTAELTVAGTSAIEALAGGIRA
                     AFLVGAIGALFAVASTFLVRRPEAAAPPGAH"
BASE COUNT          394 a          933 c          881 g          520 t
ORIGIN      
        1 ctgcagggct cgcagcggat cctttacacg ctgatgcgcc cgtacgattg gcattggagc
       61 atcaagctcg caatcatggt gctcgggtcg atgccgatat tgctcgtgag ctatcactat
      121 ctcgtgcgat tcacgtggat cggcgcgatc ctgaacggac gccggcatcc gcgtaccacg
      181 aaatcgccgc ccgcggatac ggcaccggct cccggttgac gctcttttca tgagactcga
      241 atcgttcttc gccggctctg ccgccctcat gctcgcaacc gtcgcgaacg ccgccggcga
      301 ccgcgtgctg ttcatcggca acagcttcac gttcggcgca ggctcggccg tgcgtttcta
      361 tcgcagcgat gccgtcaccg atctcaacga cgagggcatc ggcggcgtgc cggcactgtt
      421 cgagtccttc acgcggcaag cgggcctcga ctacgacgtc gcgctcgaga cgcgcggcgg
      481 caccggtctc gattttcatt tggccgagaa acgcgacgag atcacgagcc ggcggtggga
      541 catcgtcgtc gcacacggct acagcacact cgacgcggat gcgccgcgaa atcccgcgaa
      601 gctggtcgcg acgagccgtg agctcgcgga gctgctgcgc gacaggaacg ccgacgtgca
      661 gctgtttctg acggcgacgt ggtcgcgcgc ggatcaggtg tatccaacga atggcgcctg
      721 ggccggcacc gcgatcgaca cgatggcgcg cgacatccgc gctgcttacg accaagctgc
      781 ggccggcgcc ggcgcttcgg tgattccagt cggcgaggca tggaaccgcg cgatcgcgac
      841 cggcgtggcc gacgcgaatc cgtacgacgg catcgacgcc ggcaagctcg atctctggac
      901 gtacgaccac taccacgcga gcacgcacgg ctactatctc gaggcgctcg tgatcttcgg
      961 cagcgtgacc ggccgcgatc cgcgatcgct tggcgagcgc gagtgctcgg cgttcgagct
     1021 cgggctgtcg cgtaccgaag tccgagccct gcagcagatc gcgttcgacg agctggcaac
     1081 tacgcgtacg ctggcgcaga atgcgcctcc cccaccggcc gaaggcaatc cgcagcgctg
     1141 tagcgtgcgc tagaccgaca tgaacgccac cgccatcgac ggcaacgcgc aactcgtcgc
     1201 gcgcaatcgc ctcgtcatca acctgttgct cgtgtcgtct ttcgtcgtga ttctgaacga
     1261 gacgatgatg gcggtcgcga cgcctgcgtt gatgctgagc ctcggcgtca cggccggcgc
     1321 ggcgcaatgg ctcacgacgg cgttcttgct cacgatggcc gtcggcattc cgatgacggg
     1381 cttcctgctg caacgcctgc acacgcgcac ggtgttcatg ctcgcgatga cgctgttctc
     1441 tgcgggcacg ttcgtcgccg cgattgcccc ggggctgccg ctgctgatcg gggcgcgcgt
     1501 aattcaagcg tcgggcaccg cgatcatgat gccgctgctg atgacgacga tcatgacgct
     1561 ggtaccgccg gagtcgcgcg gcaagacgat gggcctcgtg tcgagcgtga tttccgtcgc
     1621 gcccgcgatc ggccccgtgc tatcgggtgc gatccttaat ttcctgcact ggcgctggat
     1681 gttcgtgctc gtgctgccga tcgcgctgtt ttctctgtgg ctcggctggc gccgcatcga
     1741 gaacgtcacc acgccgcgcg acgcgccgct cgatattctc tcggtgatcc tgtccgcgtt
     1801 cgcgttcggc ggtggcgtct acggtctcag cttgctcggc gcgccgccgg gccccggcaa
     1861 cccgcccgcg ggggttccgc tcgtaatcgg cgccgtcgcg atggccctgt tcgtgtggcg
     1921 ccagctcgtg ctgcaacgca ccgattccgc gctgctcgac ctgcgcgtat tccgctcgcg
     1981 aatgttcacg atcgctctga ccgtgttcgc gctgctgatg ttgacgttgt tcggcacgat
     2041 catcctgctg ccgatctatc tccagaacgt gctcggcctc aacacgctgc aaagcggctt
     2101 gttgttgctg ccgggagctc tgctgatggg ccggctcggg ccgcccgtcg gccgcgcata
     2161 cgaccgcatc ggcccgacga agctcgtggt tcccggcgtc atcatcgtga cggccgtgct
     2221 ctgggccatg acgctgctcg gcacgcagag taagtgggag ttcatcttgg ccggccacat
     2281 cgtgatgtgc gtcgggtttg cgctgttgtt cacgccgctg ttcaccgtgt gcctgtcgtc
     2341 ggtcccgccg caactgtact cgcacggcag cgccgtgctc ggctcgttcc agcaggtcgg
     2401 cggcgccgcc ggcgtcgcgc tgttcatcgc gatcatgtcg gggcgaaccg cggagctcac
     2461 ggtggccggc acgagcgcga tcgaggctct ggcgggcggt atccgcgcgg cgttcctcgt
     2521 cggcgcgatc ggtgcactat tcgccgtcgc gagcacgttc ctcgtgcgca ggcccgaggc
     2581 agccgcgccg cccggagctc actagcaccg tcagcgcgtc tctacttcca agcctcgata
     2641 gcctgacgct gcagcgagtc ggcgcccatc tgcatgacct cgatctgcac gccgtcggga
     2701 tccacgacgc ggccgacctg cgccttcg
//
LOCUS       DATCUD010000383         2790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96174, whole genome shotgun sequence.
ACCESSION   DATCUD010000383 DATCUD010000000
VERSION     DATCUD010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96174"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..1105
                     /locus_tag="VIQ99_05670"
     CDS             32..1105
                     /locus_tag="VIQ99_05670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182666.1"
                     /translation="MRPVLVDKIASVAIAADLGQEIRVSSDIPCEEGVLIAVEVLNNK
                     SRYNTIELTSGRMAEVKKGDVVVGALGHRKALFGYSGHLPTQLAPGDIVQLLNLGGVI
                     GICDSINPSHGEPFNCKVLGCVLDFPYLGQRVGVPARVSTVPLKLDVPLDTHGIPVVA
                     IAGTCMNSGKTAAACAIVSRFRHNGLVVDAFKSTGVALRRDILAMEDSGARHIAMFSD
                     FGICATTSKNAPALTRSLLNELSDEKPDAIVFELGDGLLGAYGVEAILRDKEIVDNIT
                     AMVLCANDPVGAWGGAKLLREEFGIEPTVISGPATDNQVGIDIIRARSNVAAFNAMTS
                     AAELGDLLQQAIGLGHRTAKISA"
     gene            1102..2166
                     /gene="argC"
                     /locus_tag="VIQ99_05675"
     CDS             1102..2166
                     /gene="argC"
                     /locus_tag="VIQ99_05675"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: protein motif:HMM:TIGR01850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEY9182667.1"
                     /translation="MSEASSIPTIVLGGSGYVAGEFLRLIASHPRLALGGVVSSSQAG
                     ESVAKTFPHLTPTFPTQQFVSLDAVIDRLGTAPKWLVLSAAPHGAAAGLIDKLLSAGA
                     SAGVELVVVDASADFRFPEAATYATVYGHEHPAPARLAKFTCAVPEHLARIETPHAAH
                     PGCFATTMLLGIVPLASLGVADEFFVSAVTGSTGAGRTPRDTTHHPLRQSNLFAYQAL
                     KHRHDPEVRALVKAATGRDVALAFVPHSGPFARGIHATIFVHARERLSQAQVDEALRE
                     FYKDAAFVRVDSEPPKMKDIAATNYAALHAIVQGDTIVVCSVADNLLKGAAGGSMQWA
                     NRLLGFPESMGLTAPAAGWL"
     gene            2166..>2790
                     /locus_tag="VIQ99_05680"
     CDS             2166..>2790
                     /locus_tag="VIQ99_05680"
                     /inference="COORDINATES: protein motif:HMM:NF012428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9182668.1"
                     /translation="MNAATQEIAAVGAHLNEVYPMLPFTPVRGVGVFLEDASGRRVLD
                     FYGGHAVAALGYGHRDLSDTIARQSRDLVFQTNALPLRVREEAADRLAAFGPPGLGRV
                     FFVNSGAEANENALRLAFRVTGRSKVVAMEHSFHGRTAAAAAVSFGAAKSWYGFPRAP
                     FDVAFVARNDGAALAAAVDSSTAAVIIEPVQGLAGAFDFHPSFLHAIR"
BASE COUNT          449 a          919 c          945 g          477 t
ORIGIN      
        1 atgttccaca cccgggccgg aggacagtga catgcgcccg gtgctcgtcg acaagattgc
       61 ttccgtggcg attgcagcgg acctcggcca agagatccgc gtgagctcag acattccttg
      121 cgaggaaggt gtgctgatcg cggtcgaggt gctgaacaac aagtcgcgct acaacacgat
      181 cgagcttacg agcggccgca tggccgaggt aaaaaaaggc gacgtggtcg tcggcgcgct
      241 cggccatcgc aaggcgttgt tcggctactc gggacacctg ccgacgcagc ttgcgcccgg
      301 cgacatcgtg cagctcctga atctgggcgg cgtcatcggc atctgcgatt cgatcaatcc
      361 gtcccacggc gagccgttca actgcaaggt attgggctgc gtgctcgact tcccgtattt
      421 gggtcagcgc gtcggcgtgc cggcccgagt ctcgaccgtg ccgctcaagc tcgacgtgcc
      481 gctcgacacg cacggcattc ccgttgtcgc gatcgccggc acgtgcatga attccggcaa
      541 gacagcggcc gcgtgcgcga tcgtgagccg attccggcac aacggcctcg tcgtcgacgc
      601 gttcaagtcg acgggcgtcg cgctgcgccg cgacatcctg gccatggagg actcgggggc
      661 gcggcatatc gcaatgttct cggacttcgg catctgcgcg acgacgtcga agaacgcgcc
      721 cgcgctcacg cgctctctgt tgaacgagct gtcggacgaa aagcccgacg cgatcgtgtt
      781 cgagctcggg gacggcctac tcggcgcgta cggagtcgag gcgatcctca gggataagga
      841 gatcgtcgac aacatcacgg cgatggtcct gtgcgcgaac gacccggtcg gtgcgtgggg
      901 cggcgcaaaa ttgttgcgcg aggaattcgg gatcgagccg accgtgatct cgggccccgc
      961 caccgataac caggtcggca tcgacatcat ccgcgcccgc tcgaacgtcg cggcgttcaa
     1021 tgccatgacg agcgcggccg agctcggcga cctgctgcaa caggccatcg gcttgggtca
     1081 caggaccgcg aagatcagcg catgagcgag gcgagcagca ttccgacgat cgtgctcggc
     1141 ggctccggtt acgtcgcagg cgaattcctg cgcttgatcg cgagccatcc gcgccttgcg
     1201 ctcggcggcg tcgtatcgtc gagccaggcc ggcgaatcgg ttgcgaagac gttcccgcat
     1261 ctgacgccga cgttcccgac gcagcaattc gtatcgctcg atgccgtgat cgaccgcctc
     1321 ggcaccgcac cgaagtggtt ggtcctatcg gccgcgccgc acggcgccgc ggcagggctc
     1381 atcgacaagc tgttgtcggc gggagcctcg gcaggtgtcg agctcgtggt cgtcgatgcg
     1441 tccgcggatt ttcggttccc agaagccgcc acctatgcca cggtgtatgg tcatgagcac
     1501 ccggcgccgg cgcggcttgc gaagttcacg tgcgcggtgc cggagcatct cgcgcggatc
     1561 gagacgccgc atgccgcgca cccgggctgc ttcgcgacca cgatgctgct cgggatcgtg
     1621 ccgctcgctt cgctcggcgt tgccgacgag ttcttcgtca gcgccgtcac gggcagcacc
     1681 ggcgccggac gcacgccgcg cgacacgacg caccatccgc tgcggcagag caacctgttc
     1741 gcgtaccagg cgctgaagca tcgccacgat cccgaggttc gggcattggt caaagcggcc
     1801 accggccgcg acgtggcgct cgccttcgtg ccgcactccg gtccgttcgc gcgcggcatc
     1861 cacgccacga tcttcgtgca cgcgagagag cggctgagcc aggcgcaggt cgatgaggcg
     1921 ctgcgggagt tctacaagga cgcggctttc gtccgcgtcg acagcgagcc gccgaagatg
     1981 aaggacatcg ccgcgacgaa ctacgcggcg ctgcatgcga tcgtccaagg cgacacgatc
     2041 gtggtgtgct ccgtcgccga caatctgctg aaaggcgcag cgggcggcag catgcagtgg
     2101 gcgaacaggt tgctcggctt tccggaatcg atgggcttga ccgcacctgc ggcaggatgg
     2161 ctgtgatgaa cgctgctaca caggagatcg ccgccgtcgg cgcgcatctg aacgaggtct
     2221 acccgatgct gccgttcacg ccggtgcgcg gtgtcggcgt attcctcgag gacgcgtcgg
     2281 gccggcgcgt gctcgatttc tacggcggtc acgcggtcgc ggcactcggc tacggacatc
     2341 gcgacttgag cgacacgatt gcgcggcaga gccgcgacct cgtgtttcaa accaatgcct
     2401 tgccgctgcg cgtgcgcgag gaagccgcgg atcggctcgc ggccttcggc ccgccgggcc
     2461 tcggtcgcgt gttcttcgtg aacagcggcg ccgaagccaa cgagaatgcg ctgcgccttg
     2521 cgttcagggt cacggggcgg agcaaggtcg tcgcgatgga gcacagcttc catggacgca
     2581 cggccgccgc tgcagccgtc agcttcggcg cagcgaagtc gtggtacggc tttccgcggg
     2641 cgcctttcga cgtggctttc gtggcgcgca acgacggcgc cgcgctcgcg gccgcggtcg
     2701 actcgagcac tgccgccgtg atcatcgagc ccgtgcaggg cctggccggc gcgttcgatt
     2761 tccatccttc gttcctgcac gcgattcgcg
//
LOCUS       DATCUD010000384         1596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_88970, whole genome shotgun sequence.
ACCESSION   DATCUD010000384 DATCUD010000000
VERSION     DATCUD010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88970"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="VIQ99_05685"
     CDS             <1..699
                     /locus_tag="VIQ99_05685"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011883251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004365 - glyceraldehyde-3-phosphate
                     dehydrogenase (NAD+) (phosphorylating) activity [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY9182669.1"
                     /translation="KEKAGMHLKAGAKKVVISAPGGKDVDATIVYGVNHKTLKAGHTV
                     ISNASCTTNCLAPLAKVLHDTVGLVRGIMTTIHAYTNDQVLTDVYHSDLRRARSATQN
                     MIPTKTGAAAAVGLVLPELDGKLDGFAVRVPTINVSLVDLTFEAARATTAKEIDEAVK
                     KASQGALKGVLEFVDEPLVSSDFNHNPASSLYDSSLTKVIEGKLVKACAWYDNEWGFS
                     NRMLDTTVALANAK"
     gene            710..>1596
                     /locus_tag="VIQ99_05690"
     CDS             710..>1596
                     /locus_tag="VIQ99_05690"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007149926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY9182670.1"
                     /translation="MALPVKRMTDLALEGKRVLIREDLNVPVKDGKVTSTARIDAALP
                     TLKAALDAGARVLVMSHLGRPKEGKPDPAASLKPVADKLGELLGRKVPLATSWLDGVD
                     VAPGELVLCENVRFNVGEEADDDALSKRMAALCDVFVMDAFGTAHRAQASTNGVARHA
                     PVACAGPLLVAELDALGKALESPKRPLAAIIGGAKVSTKIEVLQSLSTQVDELILGGG
                     IANTILAASGVTVGKSLHEKDMLDFSSKLLRGEFGKAKIPLPTDVVVATSLDAGVKGR
                     IKNVRDVAADEMILDIGPET"
BASE COUNT          305 a          507 c          557 g          227 t
ORIGIN      
        1 aaagagaagg ccggcatgca cttgaaggcc ggcgcgaaga aggtcgtgat ctcggcgccg
       61 ggcggcaagg acgtcgacgc gacgatcgtc tacggggtga accacaagac gttgaaggcc
      121 ggccacaccg tgatctcgaa cgcgtcgtgc acgacgaatt gcctggcgcc gctcgcgaag
      181 gtgctgcacg acacggtcgg actcgtgcgc ggcatcatga cgacgattca cgcgtacacg
      241 aacgatcagg tgttgacgga cgtgtaccac agcgacctgc ggcgcgcgcg ctcggctacg
      301 cagaacatga tcccgacgaa aacgggcgcc gcggcggccg tgggcctcgt gctgccggag
      361 ctcgacggca agctcgacgg cttcgcagtc cgagtgccga cgatcaacgt ctcgctcgtc
      421 gatctcacgt tcgaagccgc gcgtgcgacg acggccaagg agatcgatga ggccgtcaag
      481 aaggcgagcc aaggcgcgct caagggcgtg ctcgagttcg tcgacgagcc gctcgtgtcg
      541 agcgatttca accacaaccc ggcgtcctcg ctgtacgact cgagcctgac caaggtcatc
      601 gaaggcaagc tcgtgaaggc gtgcgcgtgg tacgacaacg agtggggctt ctcgaaccgc
      661 atgctcgaca cgaccgtcgc gctcgcgaac gcgaagtagc ggtggcggca tggcgctccc
      721 ggtcaaacgc atgacggatc tcgcgctcga ggggaagcgc gtgctgatcc gcgaggacct
      781 gaacgtgccc gtcaaggacg gcaaggtcac gagcacggca cgcatcgacg ccgcgctgcc
      841 gacgctcaaa gccgcgctcg acgccggcgc tcgcgtgctc gtgatgtcgc acctgggaag
      901 gccgaaagag ggcaagccgg acccggccgc atcgctgaag cccgtggccg acaagctcgg
      961 cgagctcctg ggccgaaagg tgccgctcgc gacgagttgg ctcgacggcg tcgacgtggc
     1021 gcccggcgag ctcgtgctgt gcgagaacgt gcgcttcaac gtcggcgagg aagccgacga
     1081 cgatgcgctc agcaagcgca tggccgcgct ctgcgacgtg ttcgtgatgg acgcgttcgg
     1141 caccgcgcat cgcgcgcaag cgagcacgaa cggcgtcgcg cgccacgcgc cggtcgcgtg
     1201 cgcgggcccg ctcctagtcg ccgagctcga cgcgttgggc aaagcgctcg aaagcccgaa
     1261 acggccgctg gccgcgatca tcggcggcgc gaaggtctcg acgaaaatcg aggtgctgca
     1321 atcgttgtcg acgcaggtcg acgagttgat cttgggcggc ggcatcgcga acacgattct
     1381 cgcggcatcc ggcgtgaccg tcggcaagtc gctgcacgag aaagacatgc tcgacttctc
     1441 ctcgaagctg ctgcgcggcg agttcggcaa ggcgaagatt ccgttgccga ccgacgtggt
     1501 cgtggcgacg agcctcgatg ccggcgtgaa aggccggatc aagaacgtcc gcgacgtcgc
     1561 ggcggacgag atgattctcg acatcggtcc cgagac
//
LOCUS       DATCUD010000385         2103 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67807, whole genome shotgun sequence.
ACCESSION   DATCUD010000385 DATCUD010000000
VERSION     DATCUD010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2103)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2103)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2103
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67807"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1141
                     /locus_tag="VIQ99_05695"
     CDS             <1..1141
                     /locus_tag="VIQ99_05695"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182671.1"
                     /translation="VLGRFVQGAGGAMMVPVGRLVLLRTVPKSELVTALSWVTIPALI
                     GPMVGPPLGGFITTYFDWRWIFLVNLPIGALGMILGLRFIPNARETAAPFDWLGFALA
                     GGGLGAAMFGFSTLGQHLIPLEVASTSLVVGLAGLVGYVFHERRHEHALLDLALLRLP
                     TFRAGVLGGSLFRIGIGASPFLLPLMLQLGFGLSPVASGLITFVSSIGAIFMKTLAAR
                     TLNLLGFRRVLLWNALAASGLLCSFGLFRPSTPELVIMATLLVSGCCRALQFTSLNAI
                     SFADVEASRMARASSLSSMLQQLSLSLGVAIAGYALEIVGALAGRPATELGNFTIAFF
                     VVGLISAASAYWAWRLPRNAGAELAGRARQAPETSDPSTAEQPAG"
     gene            complement(1147..1812)
                     /locus_tag="VIQ99_05700"
     CDS             complement(1147..1812)
                     /locus_tag="VIQ99_05700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182672.1"
                     /translation="MAAAQLVAPPDEEPDLGARDVERASYHVPAFSNELVTVLNVFIP
                     PHRESGYHRHSLDSVGVLLSDTERTGQVLGAEATVTPPRGNGSVSFTGYASAPLVHTV
                     AVTGDVPFHNIVVQLRTRDPGGFTVSARGQGYTQILDNERVRVWRLALDPGHTAPAIT
                     QAAPGVRVVIDGGELVEIDPNGRERGMSPRDGEFFWQEAGETRAVRNVGATRIELVEI
                     ELK"
BASE COUNT          289 a          694 c          729 g          391 t
ORIGIN      
        1 ggtcctcgga cggttcgtgc agggcgcggg cggcgcgatg atggtccccg tcggccggct
       61 cgtgctgcta cggaccgtgc cgaagtccga gctcgtcacg gcgctctcgt gggtcacgat
      121 tccggcgctg atcgggccga tggtcgggcc gccgctcggc ggcttcatca cgacgtactt
      181 cgattggcgt tggatcttcc tcgtgaactt gccgatcggc gcgctcggca tgatcctcgg
      241 gttgcgattc attccaaatg cgcgcgagac ggcggcaccg ttcgattggc tcggttttgc
      301 gctcgccggg ggtgggctcg gcgccgcgat gttcggcttc tcgacgctcg gacaacatct
      361 gattccgctc gaggtcgcat cgacctcgct cgtggtcggc cttgccggcc tcgtgggata
      421 cgtgttccac gagcggcgcc atgagcacgc gctgctcgac ctcgcgctgc tcagattacc
      481 gacctttcgt gcgggcgtgc taggcggctc gctgtttcgg atcgggatcg gagcgtcgcc
      541 gttcctgctg ccgctgatgc tgcagctcgg tttcggcttg agtcccgtcg cgtcgggcct
      601 catcacgttc gtgtcgtcga tcggcgcgat cttcatgaag acgctcgcag cacgcacatt
      661 gaacctgctc ggcttccgcc gcgtgttgct gtggaacgcg ctcgcggctt cgggcttgct
      721 gtgttcattc ggcttgtttc ggccgagcac gccggagctc gtgatcatgg cgacgctgct
      781 cgtgagcggc tgctgccgcg cgctgcagtt cacgagcctg aacgcgatca gcttcgcgga
      841 cgtcgaggcc tcgcgcatgg cgcgcgcgag cagcctgtcg agcatgttgc agcagttgtc
      901 tttatctctc ggcgtcgcga tcgccggcta cgcgctcgag atcgtcggag ctctcgcggg
      961 ccgcccggcg accgagctcg gcaacttcac gatcgcgttc ttcgtcgtag gcctgatctc
     1021 cgccgcttcg gcgtactggg catggcgctt gccgcgcaac gcgggggccg agctagccgg
     1081 gcgagcgcgc caggccccgg agaccagcga tccgagcacg gccgagcagc ctgcgggcta
     1141 acgcgctcac ttcaactcga tttcgacgag ctcgatgcgg gtggcgccga cgttgcgcac
     1201 ggcgcgcgtt tcgccggctt cctgccagaa gaactcgccg tcgcgtggcg acatgccgcg
     1261 ctcgcggccg tttgggtcga tctcgacgag ctccccgccg tcgatgacca cgcgcacgcc
     1321 cggcgccgct tgcgtgatcg cgggtgccgt atggccggga tcgagggcga gccgccaaac
     1381 acgcacgcgc tcgttgtcga gaatctgcgt atagccctgg ccccgcgcgc tcacggtgaa
     1441 gccgccgggg tcacgggtgc ggagctgcac gacgatattg tggaagggca cgtcgccggt
     1501 tacggcgacg gtgtgaacga gcggcgcgct cgcgtaaccc gtgaagctca cggagccgtt
     1561 gccgcgcggc ggcgttacgg tcgcttcggc accgagcact tggccggtcc gctccgtgtc
     1621 gctcagaagc acgccgacgg aatcgaggga atggcggtga tagccggatt cgcggtgcgg
     1681 ggggatgaac acgttcagca ccgtcacgag ctcgttgctg aaagcaggca cgtgatacga
     1741 cgcgcgctca acgtcgcgtg ccccgaggtc aggctcttca tccggcggcg cgaccagctg
     1801 cgccgcggcc acgcacgaaa ccaggcagcc cagcggcgcc aaaataaaga cccggcccag
     1861 ggttcgtcta cgcggaggtg cggcaggcac caaattaggg tcgacgtagc cggaagctgt
     1921 cggctgggct ggcgtcaagt cagcaaccag ccgccgtcga tgacgaggtt gatgccgttg
     1981 acgccgcggt tcacgaacag gaagtcgacg gcgccgacga cgtcctcggt cgtcgcgagc
     2041 ctgccgcccg gcgtgcgctt ctcgatgttc gcgatcgctt ccttcttgtc cgcccaggcg
     2101 ggg
//
LOCUS       DATCUD010000386         3293 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_32217, whole genome shotgun sequence.
ACCESSION   DATCUD010000386 DATCUD010000000
VERSION     DATCUD010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32217"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..769)
                     /locus_tag="VIQ99_05705"
     CDS             complement(<1..769)
                     /locus_tag="VIQ99_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182673.1"
                     /translation="MRAHSVGVAIALGAVAAAAHAQSGPFTEAQSAAGRSSYLANCAG
                     CHLADLRGANEARPLVGPDFMRTWGGRTAQELVAYLSVTMPPPPATPGSLGAQSYLNL
                     AAFLLQANGATPGTNALTAGSTVAIGSVATGTMSDGFRAALASAAPAGQGAAAGRTGI
                     SVAGEASVRPVTDAMLRRLPSDDWLMIRGNYQAWNYSELDQVTRDNVDDLTLEWVWAM
                     TDGGWNEPAPVVHDGVLYLNNMGNIIQALDAASGELIW"
     gene            complement(766..1170)
                     /locus_tag="VIQ99_05710"
     CDS             complement(766..1170)
                     /locus_tag="VIQ99_05710"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEY9182674.1"
                     /translation="MIALVGATLALGAAAQQSFKIRLRPVPIEASTAANTIGAGEATA
                     ELSGTKLILRGSFSGLKGAATVARLHQGPVMGVRGPAIADVTVPPATSGTFTAEVTLT
                     AAQVEALRQRQIYLQIHSATAPDGNLWGWVLP"
     gene            complement(1314..1580)
                     /locus_tag="VIQ99_05715"
     CDS             complement(1314..1580)
                     /locus_tag="VIQ99_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182675.1"
                     /translation="MFYLKWTPAELATLRAGALYTEVDEDGWVQRELGISADGLITHQ
                     LVPSDSRPGWFGLARLSFAMLDSNVTKAEFESLWHAGAARSAEP"
     gene            complement(1781..2035)
                     /locus_tag="VIQ99_05720"
     CDS             complement(1781..2035)
                     /locus_tag="VIQ99_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014770658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY9182676.1"
                     /translation="MNIYVGNLSYSMSEDELREAFGAFGEVSSVKILMDRETGRSRGF
                     GFVEMPNKSDGEKAIAQLNGKEVGGRPLRINEARPKEQRR"
     gene            complement(2184..2657)
                     /locus_tag="VIQ99_05725"
     CDS             complement(2184..2657)
                     /locus_tag="VIQ99_05725"
                     /inference="COORDINATES: protein motif:HMM:NF040341.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6174 domain-containing protein"
                     /protein_id="HEY9182677.1"
                     /translation="MRYLERMVRAAIHCTVVSGAVLGIGPVFADADLDAAQARWRAAA
                     LTGYEYGYHKYCDCHRESPPETIVSVRDGKVVRVRHRPAGSTTEVPAADKNFDYYWTV
                     DGLFRLIASALERGVSVRATYDAVQGFPREIYIDYDAELIGDELDLRLTAVRALP"
     gene            complement(2667..2831)
                     /locus_tag="VIQ99_05730"
     CDS             complement(2667..2831)
                     /locus_tag="VIQ99_05730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018416167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3012 domain-containing protein"
                     /protein_id="HEY9182678.1"
                     /translation="MRSVKRAVLILVTIWLAACEPEVGSERWCENMREKPRGDWTANE
                     ALEFARSCVL"
     gene            complement(2906..3259)
                     /locus_tag="VIQ99_05735"
     CDS             complement(2906..3259)
                     /locus_tag="VIQ99_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182679.1"
                     /translation="MAKTINLLGRGIGVVCAAALAVAWAFALWVPTAGLTLSGISVIT
                     ALLLVVFALFAGIAAVHGHAFVVALLFLASFFPVGVFLLPTDHWLKWVGWVDLGLLVS
                     AVLLWATARRVAAAT"
BASE COUNT          557 a         1173 c         1042 g          521 t
ORIGIN      
        1 cccagatcag ctccccgctc gcggcgtcga gtgcctggat gatgttgccc atgttgttca
       61 ggtacagcac gccgtcgtgc acgaccggcg cgggctcgtt ccatccgccg tcggtcatcg
      121 cccacaccca ctcgagcgtg aggtcgtcga cgttgtcgcg cgtgacctga tcgagctcgc
      181 tgtaattcca ggcctgatag ttgccgcgga tcatgagcca atcgtcggac ggcaagcggc
      241 gcagcatcgc gtccgtcacg gggcggacgc tcgcctcacc cgcgacgctg atgccggtgc
      301 gtcccgcggc tgcgccctgg cctgccggcg ccgcgctcgc gagcgcggca cggaagccgt
      361 cactcatggt gcctgtcgcg acgctgccga tcgcgaccgt ggagccggcc gtcagtgcgt
      421 tcgtgccggg cgtcgcgccg ttcgcctgca acaggaatgc cgcgaggttc agatagctct
      481 gtgcgccgag gctgcccggc gtcgccggtg gcggcggcat cgtgacgctc aagtacgcga
      541 cgagctcctg tgccgtgcgg ccgccccagg tccgcatgaa gtcgggaccg acgagtggtc
      601 gtgcctcgtt cgcgccgcgc agatccgcga gatggcagcc tgcacaattg gcaagatacg
      661 acgagcgccc cgcagccgat tgcgcctccg tgaacggccc gctctgcgcg tgcgctgccg
      721 ccgcgaccgc gccgagcgcg atcgcaacac cgacgctgtg cgccctcatg gcagcaccca
      781 accccagagg ttcccgtcgg gtgcggtcgc gctgtgaatc tgcaagtaga tctgccgctg
      841 ccgcagcgct tccacctgtg cggccgtcag cgtgacctcg gccgtgaacg tgccgctcgt
      901 cgccgggggc acggtcacgt ccgcgatcgc gggaccgcgc acgcccatca cgggaccctg
      961 atgcaaccgc gcgaccgtcg ctgcgccctt caggccggag aagctgccgc gcaggatcag
     1021 cttcgtgccg gacagctccg ccgtcgcttc gccggcgccg atcgtgttcg cggccgtcga
     1081 ggcctcgatc ggcacgggcc gcaagcgaat cttgaagctc tgctgcgcgg ccgcgccgag
     1141 cgcgagcgtg gcgccgacga gcgcgatcaa ccagcggact cgacgcaccg cgcgtcggtg
     1201 aagagcggac gaagccatgg caccccccga tgactcgtac tcgtgattcg gccgaatcgc
     1261 cgccgtcata gcggcgattc tactcagcgc cgctgaggtc gggatagccg cgttcagggc
     1321 tcggccgacc gcgcggcccc cgcgtgccac agcgactcga actcggcttt cgtcacgttg
     1381 ctgtcgagca tcgcgaacga cagtcgtgcg aggccgaacc agccggggcg cgaatcgctc
     1441 ggtacgagct gatgagtgat caaaccgtcg gcgctgatgc cgagctcgcg ctgtacccaa
     1501 ccgtcctcat cgacttccgt gtacagagcg cccgcgcgca gcgtcgcgag ctctgccggc
     1561 gtccatttca ggtagaacat tccctagggc atccccattg gccggccggc gagcgcgccg
     1621 ccgtcgttgt tgttgtagtg gtggccatcg agattatagc cacgcaggcc tcgaaacgcc
     1681 gtggcggcga cataacgccg cggggcgctg cggcacgagc gcaaacccac acgtcgccgc
     1741 gttgcggcgg ccgtgctcgg tcttgcgaca gcgacgcgcg ttagcggcgc tgttctttcg
     1801 ggcgcgcttc gttgatacgc aacgggcgac cgccgacttc cttaccgttg agctgcgcga
     1861 tggctttttc accgtcgctc ttgttcggca tctcgacgaa accgaaacct cgcgagcggc
     1921 ctgtttcccg atccatgagg atcttcacgg acgagacttc accaaacgca ccgaacgctt
     1981 cgcgaagctc gtcctcgctc atgctgtacg acaaattgcc aacgtagata ttcatgactg
     2041 agactctcag gccgttgcac accccccgcg agcgctcgac caacggcgca aggccgggcg
     2101 tcgacggcca aaactctacg actggcccac ttcaggggtc aatcccgaga tactcccgat
     2161 tgtgcggtta tatccgcgcg gggctagggc agcgcccgga cggccgtgag gcgcaagtcg
     2221 agctcgtcgc cgatcagctc ggcgtcgtag tcgatgtaga tctcgcgagg gaagccctgc
     2281 accgcgtcgt aggtcgcccg caccgagacg ccccgctcga gtgcggacgc gatcaatcga
     2341 aacaggccgt cgacggtcca gtagtagtcg aagttcttgt ccgcggccgg aacctcggtc
     2401 gtgctgccgg ccggccggtg ccgcacgcga acgaccttgc cgtcacggac actgacgatg
     2461 gtctccggcg gcgactcgcg atggcaatcg cagtacttgt gatacccgta ctcataaccc
     2521 gtgagcgccg cggccctcca gcgggcctgc gcggcgtcga gatccgcgtc cgcgaagacc
     2581 ggaccgattc cgagcaccgc gcccgagacc actgtgcagt ggatcgcggc ccggaccatt
     2641 cgctcgagat agcgcaagcg atactcctac agcacgcagc tgcgtgcgaa ctcgagcgct
     2701 tcgttggcgg tccagtcgcc gcgcggtttc tcgcgcatgt tctcgcacca gcgctcggag
     2761 ccgacctcgg gctcgcaggc cgctagccaa atcgtcacca ggatcagcac tgcccgcttc
     2821 acgctccgca tcgtcgctcc gtcaccgctt tggaacgggg tcattctaga acactcgaac
     2881 gggcgcgtgc cgcgacgagc tctggttacg tggccgctgc gacccgacgc gccgtagccc
     2941 acagaagaac ggccgacacg agcaggccaa ggtccaccca gccgacccac ttcagccaat
     3001 ggtcggtcgg cagcagaaac acgccgaccg ggaagaacga cgccaggaac agcagcgcga
     3061 ccacgaaggc gtgaccatgc accgccgcga tgccggcaaa cagcgcaaac accacgagca
     3121 ataacgccgt gatcacactg ataccgctca gcgtgagccc cgccgtcggc acccacagag
     3181 cgaacgccca cgcaaccgcg agcgcggccg cacaaacgac gcctatgccg cggccgagca
     3241 agttgatcgt cttcgccatg cgcacaccgt cttagaccgt cctagactct gcc
//
LOCUS       DATCUD010000387         1806 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_67841, whole genome shotgun sequence.
ACCESSION   DATCUD010000387 DATCUD010000000
VERSION     DATCUD010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1806
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67841"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VIQ99_05740"
     CDS             <1..496
                     /locus_tag="VIQ99_05740"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HEY9182680.1"
                     /translation="ERVQATPQTTDNAAETRQRAATLVQQDVPQTNVLELGLRAELPD
                     GVDDARTLFATPSTQQSGLAEYLDGWRRRVERIGTANYPTELLGNSVGRPTLEVVIRA
                     DGRLDDIVVRRSSGDKALDQAALKILRLAAPFAPLPESIRADYDVLRFAYEWDFSRGT
                     ADAR"
     gene            550..1104
                     /locus_tag="VIQ99_05745"
     CDS             550..1104
                     /locus_tag="VIQ99_05745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014159933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY9182681.1"
                     /translation="MRSLQDHFLIAMPAMADPNFNETVTYLCKHDTEGAFGIVINRPS
                     DLSLAEMLGQLAIELKDRSLAEKSVVHGGPVEPQRGFVLHRSSEAFEATLAIGTDVKL
                     TSSPDILSALGRGEGPEPVLVALGYAGWGRGQLEAELANNTWLTVPANAAIIFDTPFE
                     QRWTAALGLPGVDIQRITDYAGHA"
     gene            1122..1553
                     /gene="ruvX"
                     /locus_tag="VIQ99_05750"
     CDS             1122..1553
                     /gene="ruvX"
                     /locus_tag="VIQ99_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012969444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEY9182682.1"
                     /translation="MARSSDRNILLAFDFGLRRLGVATANLETRTASPLTTLAVDREP
                     PWTEIDRLVEAWRPGQFVVGVPEGDGAAAIARQARSFANALTERYGLPVATVDETLTS
                     VAAHAELAEGRRSGYLRRRVGRGRVDRLAACLIAEQWMSEQ"
     gene            1535..>1806
                     /locus_tag="VIQ99_05755"
     CDS             1535..>1806
                     /locus_tag="VIQ99_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEY9182683.1"
                     /translation="MDERAVSYEGNRATVFLEDARILTQRAHPGRQFVLRVHAPRAAR
                     RASPGTFAHIACDPSVPMRRPLSIMRADANEGWLEFLYKPRGHGLD"
BASE COUNT          306 a          619 c          598 g          283 t
ORIGIN      
        1 cgaacgcgtg caagccacac cgcaaacgac ggacaacgcg gcagagacgc ggcaacgcgc
       61 cgcgacactc gtgcagcagg acgttccgca gacgaacgtc ttggagctcg gcctgcgcgc
      121 cgagcttccc gacggcgtcg acgacgcgcg aaccttgttc gcgacaccga gcacgcagca
      181 atcggggctc gccgaatacc tcgatggctg gcgccggcgc gtcgagcgca tcggcaccgc
      241 gaattacccc accgagctcc tcggcaacag cgtcgggcgg ccgactctcg aggtcgtgat
      301 ccgcgccgac ggccgactcg acgacatcgt cgtccgccgc tcgtcgggcg acaaggcgct
      361 cgatcaagcg gccctgaaga tcttgcgtct cgcagctccg ttcgcgccgc tgccggaaag
      421 catccgggcc gactacgacg tgctgcgatt cgcgtacgaa tgggatttct cgcgcgggac
      481 ggccgacgcc cgctgaatcc gaggccgatg ttaggatagt ggctccctac tcgacggagt
      541 gcggtttcca tgcggtcgct acaagatcac ttcttgattg cgatgcctgc gatggccgat
      601 ccgaacttca acgagacggt cacgtatctc tgcaagcacg acaccgaggg agcgttcggc
      661 atcgtaatca accggccgag cgatctatcc ctggccgaaa tgctgggtca gctcgcgatc
      721 gagctcaagg atcgcagctt ggccgaaaaa tccgtcgtgc acggcgggcc cgtggagccg
      781 cagcgcggct tcgtgctgca tcgatcgagc gaggccttcg aagccacgct cgcgatcggc
      841 accgacgtca agctcacgtc gtcgccggac atactgtccg cgctcggccg cggtgaaggc
      901 ccggagcccg tgctcgtggc gctgggttac gctggctggg gacgcggaca gctcgaagcg
      961 gagctcgcca acaatacttg gctcacggtt cccgccaacg cggcgatcat cttcgacacg
     1021 ccgttcgagc aacgttggac cgcggccctg ggcctgccgg gagtcgacat tcagcggatc
     1081 acggactatg ccggccatgc gtgagccacg gggaagcccg cgtggcacgg tctagcgacc
     1141 gaaacatcct cctcgcattc gacttcggat tgcgccgttt gggtgtcgca acggcgaacc
     1201 tggaaacccg cacggcctcg ccgctgacga cgctggccgt ggaccgcgag ccgccctgga
     1261 ccgagatcga tcggctcgtg gaggcttggc gtcccgggca attcgtcgtc ggcgtgcccg
     1321 aaggcgacgg cgcagccgcg atcgcgcggc aagcccgctc gttcgcgaac gcactgacgg
     1381 aacgctacgg cttgcccgtc gcgaccgtgg acgagaccct gacatccgtc gccgcgcacg
     1441 cggagctcgc ggaagggcgc cgctccgggt atcttcgccg ccgcgtcggt cggggccgag
     1501 tcgatcggct ggcggcctgt ctgatcgcag agcagtggat gagcgagcag tgagctacga
     1561 aggcaatcgc gcgacggtgt ttctcgagga tgcgcgcatc ctgactcagc gtgcgcaccc
     1621 gggccggcaa ttcgtgctgc gcgtccatgc cccgcgcgcg gcacgccgcg cttctccggg
     1681 cacgttcgcg cacatcgcgt gcgatccctc cgtgccgatg cgcaggccgc tgtcgatcat
     1741 gcgggccgac gcgaacgaag gctggctcga gttcttgtac aagccacgcg gccacggcct
     1801 cgacat
//
LOCUS       DATCUD010000388         2625 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10784, whole genome shotgun sequence.
ACCESSION   DATCUD010000388 DATCUD010000000
VERSION     DATCUD010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2625
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10784"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1374)
                     /locus_tag="VIQ99_05760"
     CDS             complement(<1..1374)
                     /locus_tag="VIQ99_05760"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEY9182684.1"
                     /translation="MKRPLPLISSIASAVAAAIPLLVSAPAHAATACTDLAKLQLVDT
                     KITLAERVPAGAFAAPGVQQPLQVPAMCRVAGTVAPAINFEVWLPEGATWNGRFQAVG
                     GGGLAGIISYPAMAEAVRAGYASSSTDTGHVATDTTWLYDRQRVVDYGYRAIHEMTLK
                     AKAVINEHYGRHPEYSYFNGCSTGGRQGLMTAQRYPDDYDGIVSGAPVFRFTNLHMGQ
                     LWTAHATLKKPGALLTREDFARVGEAAVAQCDAHDGVKDGIITDPRTCDFDPSKLTGF
                     RPEQIEALKMIYQGAVNPRTGAPIYPGLEPGGEGAQPGNPGWALIMNGQTPFAIDNAV
                     IGGMGFGNPSWDWKTFDFDSDVGLVNAKLFGVLNAVNPDLRDFKNGGGKLIVWHGWND
                     PGVMPQQTIDYFDDVVEYAGKATGGDGAAFTDEYLRLYMLPGVGHCRGGVGPDQVDWM
                     SALAGWVE"
     gene            1519..>2625
                     /locus_tag="VIQ99_05765"
     CDS             1519..>2625
                     /locus_tag="VIQ99_05765"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HEY9182685.1"
                     /translation="MSVLRKLIVTAAIAIGASWSGATLAGSIPTGKAEDVGMSSERLE
                     RIGPAMQQHIDAGEIAGVVTLVARRGQIVHFEAYGYADIAKRTPMRTDHIFGLASSSK
                     PITAVAILMLVERGAVRLQDPVSKFIPEFGAPAQVAVAKPGGAEGEYDLVPAARPITV
                     ADLLKHGSGLMSNGLGQRSVGQTLQRTPQDTLATYIPKLGTVPLDFQPGTLWRYSGLA
                     GFDVLSRIVEVASGQPFDEFLKENIFEPLDMPDTSFYYTGRQAERLASVHARRDGKLE
                     ATARDLSNVVYFSGAGGLSASVEDYLQFAQMLLNRGELDGQRLLGPRTVEMMTANHTG
                     DMVNGQFGRPARGMGFGLGMQVVLDPIAADLAVSK"
BASE COUNT          429 a          880 c          865 g          451 t
ORIGIN      
        1 ctcgacccac cccgcgagcg cgctcatcca gtccacctga tcggggccga cgccgccgcg
       61 gcaatggcct acgccgggca gcatgtagag gcgcagatac tcgtccgtga acgccgcgcc
      121 gtcgccgccg gtcgccttgc ccgcgtattc gacgacgtcg tcgaaatagt cgatggtctg
      181 ctgcggcatc acgccgggat cgttccaccc gtgccagacg atcagcttgc cgccgccgtt
      241 cttgaagtcg cggaggtccg gattcacggc gttcaatacg ccgaatagtt ttgcgttcac
      301 gaggccgacg tcggagtcga agtcgaacgt cttccagtcc cagctcggat tgccgaaccc
      361 catgccgccg atcactgcgt tgtcgatcgc gaacggcgtc tggccgttca tgatcaacgc
      421 ccaaccggga ttgccgggtt gcgccccctc accgccgggc tcgagccccg ggtagatagg
      481 agcgcccgtg cgcggattca cggcgccttg atagatcatc ttcagcgcct cgatctgctc
      541 cggccggaaa cccgtgagct tgctcggatc gaaatcgcag gtacgcggat ccgtgatgat
      601 cccgtccttg acgccgtcat gtgcgtcgca ctgtgcgacc gccgcctcgc caactcgcgc
      661 gaaatcctcg cgcgtgagca gagctccggg cttcttcagc gtcgcgtgcg ccgtccagag
      721 ctggcccatg tgcaggttcg tgaaccgaaa cacgggcgca cccgagacga tgccgtcgta
      781 gtcgtcggga tagcgctgcg cggtcatcag cccttgccgg ccgcccgtcg agcagccgtt
      841 gaagtacgag tactccggat ggcggccgta atgctcgttg atgacggctt tggccttcag
      901 cgtcatctcg tgaatcgcgc ggtagccgta gtcgaccacg cgctggcgat cgtagagcca
      961 ggtcgtatcc gtcgcgacgt gcccggtatc cgtcgacgac gacgcatagc ccgcgcgcac
     1021 ggcctcggcc atcgccgggt agctgatgat gccggcaaga ccgccgccgc ccacggcttg
     1081 gaaccggccg ttccaggtcg cgccctcggg cagccagacc tcgaagttga tcgccggcgc
     1141 gaccgtgccc gcgacgcggc acatcgcggg gacttgcagc ggctgctgca cgcccggcgc
     1201 cgcgaacgcg cctgccggca cgcgctcggc caacgtgatc ttcgtgtcca ccaattgcag
     1261 cttcgcgaga tccgtgcacg ccgtggccgc atgggcgggc gcactcacga gcagcggaat
     1321 ggccgcggca acggcgctgg cgatggacga gatcagaggc agcgggcgtt tcatggtgtt
     1381 gttcccctcg gtgatgggaa aaagcatagg gggtttcggg cggacctgtc acgagttttg
     1441 ccaagatcgg acaggacatc atctggccgg aagcgcctgc gctaccatcg gccgcaacaa
     1501 tcactgggga gctcctcgat gtctgtccta cggaagctga tcgtcacggc agccattgcc
     1561 attggcgcgt cttggtcggg cgccacactg gccggttcga tcccgaccgg caaggccgag
     1621 gacgtcggca tgtcgtccga gcgcctcgag cggatcggcc ccgcgatgca gcaacacatc
     1681 gatgccggcg agatcgccgg cgtcgtgacg ctggttgcac gacgcggcca gatcgtgcac
     1741 ttcgaggcat acggctacgc cgacatcgcg aagcgcacgc cgatgcggac cgatcacatc
     1801 ttcgggctcg cgtcgtcgtc gaagccgatc acggccgtcg cgatcctgat gctcgtcgag
     1861 cgcggcgccg tgcgcctgca agatccagtg tcgaagttca tccccgagtt cggcgcgccc
     1921 gcgcaagtcg cggtcgcgaa gcccggcggc gccgagggcg agtacgatct cgtgcccgcc
     1981 gcgcggccga tcacggtcgc ggatttactg aagcacggct cggggctcat gagcaacggc
     2041 ttgggccaac gttcggttgg gcagacgctg cagcgcacgc cgcaggacac gctggccacc
     2101 tacattccga agctcggtac cgtaccgctc gacttccagc ccggcacgct gtggcgttac
     2161 agcggcctcg cgggattcga cgtgctctcg cggatcgtcg aggtcgcatc gggacaaccg
     2221 ttcgacgagt tcttgaagga gaacatcttc gagccgctcg acatgcccga cacgtcgttc
     2281 tactacactg gacgccaggc agaacgtctc gcgtccgtgc acgcgcggcg cgacggcaag
     2341 ctcgaggcga cggcgcgcga tctgtcgaac gtggtgtatt tctcgggcgc gggcgggctc
     2401 tccgcatccg tcgaggacta tctgcaattc gcgcagatgc tgctgaatcg gggcgagctc
     2461 gacgggcagc ggctactcgg gcctcgcacc gtggagatga tgacggcgaa tcacaccggc
     2521 gacatggtca atggtcagtt cgggcggccg gcgcgcggca tgggtttcgg gctcgggatg
     2581 caagtcgtgc tcgatccgat cgccgcggac ctcgccgtgt cgaag
//
LOCUS       DATCUD010000389         3395 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_89042, whole genome shotgun sequence.
ACCESSION   DATCUD010000389 DATCUD010000000
VERSION     DATCUD010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3395)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3395)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3395
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89042"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..806
                     /locus_tag="VIQ99_05770"
     CDS             36..806
                     /locus_tag="VIQ99_05770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016903649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9182686.1"
                     /translation="MWRINLVGLWTIVRKESRRVVRIWVQTIVPPAITMTLYFIIFGS
                     LVGSRIGEMDGVPYMTFIAPGLIMMAVITNSFANVVSSFFSSKLMLHLEEMLVAPLAH
                     TTIVLGFVVGGIVRGLLVAALVVVVALFFTDLTVVHPFVTLTTILLTALVFSTAGLFN
                     AIFAKTFDDISIIPTFVLTPLTYLGGVFFSISLLPPFWQKVALANPILYMVNAFRYGM
                     LGSSDIPIGVAYLIMIGFSVGLFAAVLLMLKHGSGVRA"
     gene            808..1482
                     /locus_tag="VIQ99_05775"
     CDS             808..1482
                     /locus_tag="VIQ99_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015941286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HEY9182687.1"
                     /translation="MCGRFGLFVTPEVLEEFFGLAEPPAAAPPPRYNLTPGQAVAVVR
                     ERDGGRRLDALQWGLVPFWAKDATIGRRLINARFDSLAEKPAFREAWTRRRCLIPASG
                     FYEWSEAKGGRKRPYFIHASGEPLLAFAGLWERWRAPSGERLETCVIVTTDATEQLAS
                     IHGRMPLLVPRAAHAAWLDSRTGLAEVRELARAVPPLEVHRVGFAVNDPRNDDAALVE
                     PVEDGP"
     gene            complement(1486..2163)
                     /locus_tag="VIQ99_05780"
     CDS             complement(1486..2163)
                     /locus_tag="VIQ99_05780"
                     /inference="COORDINATES: protein motif:HMM:NF027851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspB"
                     /protein_id="HEY9182688.1"
                     /translation="MSFILDALRKSEHERQRSTVPGLAHVPLATVPPPLPRWAVAAIA
                     ALGVAVLVLAGAWWQSTRSDADTAATRPEPALQRTVVLPPPAASPPTTLPAPVSAGAE
                     RAPNERTLATAAANEPAVPPFASASRAETPSVAAPSVAAPSRQVADESALPTAAALAA
                     QGVALPQLRLELHAFSERPSERYVFINGRKYVEGERLPEGTQLLSITPVGAVLSQYGQ
                     RFLLLPE"
     gene            complement(2165..>3395)
                     /locus_tag="VIQ99_05785"
     CDS             complement(2165..>3395)
                     /locus_tag="VIQ99_05785"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY9182689.1"
                     /translation="KLLQIILIGQPELRDVLDRPEMRQIAQRITGRYHLEPLDGHDTR
                     AYVNHRLRVAGAQSDIFTKSAIRALHRQARGIPRLINVIADRALLAAYTQDRRNVDTK
                     LVGAAAAEVFGIRRRRTPWWPAATAAAGVLALLFGVTNLRETPAPAVLQQEPQVLLGA
                     TPSAPSPVVERLVASSTNERAVELGVAAADPGTDEQQRASPATLQSLLADPEFVVDTD
                     RAIAELLALWGARYDPARGDPCEQAVEQGLRCLFQRRGTLSELRRVDWPTILSLVGPD
                     GREHPVVVSSLGYDHARLVANGRTFELPLAELSFYWYGDHLLLWRPGDAPGTDLAPGD
                     DDVGVRWLRATLASLAGETPPSDGSTLYDDSLERRVRAYQESHQLVVDGIVGVRTQVA
                     MVAELDLPDTPSLIEEH"
BASE COUNT          499 a         1138 c         1176 g          582 t
ORIGIN      
        1 agatagcggt cgagcggacg gcgcaagcgc cggacctgtg gcgcatcaac ctcgtcggtc
       61 tctggacgat cgtgcgcaag gaatcgaggc gcgtcgtgcg gatctgggtg cagacgatcg
      121 tgccgccggc gatcacgatg accttgtact tcatcatctt cggcagcctc gtcggcagcc
      181 gcatcggcga gatggatggc gtcccctata tgacgttcat cgcgcccggg ctgatcatga
      241 tggcggtgat cacgaactcg ttcgcgaacg tcgtctcgtc gttcttttcc agcaagctca
      301 tgctgcacct cgaggagatg ctcgtcgcgc cgctcgcaca cacgacgatc gtgctcggct
      361 tcgtggtcgg cggcattgtt cgcgggctgc tcgtggccgc gctagtcgtc gtcgtggcgt
      421 tgttcttcac ggatctcacg gtcgtccatc cgttcgtgac gctgaccacg atcctgttga
      481 ccgcgctggt gttctcgacg gccgggctgt tcaacgcgat cttcgcgaag acgttcgacg
      541 acatctcgat cattccgacg ttcgtgctga cgccgttgac gtaccttggc ggcgtgttct
      601 tctctatctc gctgctgccg ccgttctggc aaaaggtggc gctcgcaaat ccgatcctct
      661 acatggtcaa cgcgtttcgg tacggcatgc tgggctcgtc cgacatccca atcggcgtcg
      721 cgtacctgat catgatcggc ttttcggttg gcttgttcgc ggcggtccta ttgatgctga
      781 agcacggcag cggcgtacgg gcctgacgtg tgcgggcggt tcgggttgtt cgtcacgccc
      841 gaggtgctcg aggagttctt cggcctcgcc gagcccccgg ccgccgcgcc gccgccccgc
      901 tacaatctga ccccggggca agccgtggcc gtcgtgcgcg agcgcgatgg cgggcgtcgg
      961 ctcgacgcac tgcagtgggg actcgtgccg ttctgggcta aggacgcgac aatcggccgc
     1021 cggctcatca acgcgcgctt cgacagcctc gccgagaagc cggcgttccg cgaggcgtgg
     1081 acgaggcggc gttgcctgat ccccgcgagc ggcttctacg agtggagcga agccaaaggc
     1141 ggccgcaaac gtccgtactt cattcatgcg agcggcgagc cgttgctcgc gttcgccggt
     1201 ctctgggaac gttggcgtgc gccatcgggc gagcggctcg aaacgtgtgt gatcgtcacg
     1261 accgacgcga cggagcagct cgcgtcgatc cacggccgca tgccattgct cgtgccgcgc
     1321 gcggcgcacg cggcctggct cgactctcga acgggtttgg ccgaggtccg cgagctcgcc
     1381 cgagcggtgc cgcctctcga ggttcatcgc gtgggattcg cagtcaacga cccgcgcaac
     1441 gacgacgcgg ccttggtcga gcctgtcgag gacgggccgt gacgctcact ccggcaggag
     1501 cagaaaccgc tggccgtact ggctcaggac cgcgccgaca ggagtgatcg acaggagttg
     1561 tgtgccctcg ggcagacgct cgccttcgac gtatttgcgt ccgttgatga acacatagcg
     1621 ctcgctcggc cgctcgctga acgcatgcag ctccagccgc agctgcggca acgcgacgcc
     1681 ttgtgccgcg agagccgctg cggtcggcaa cgccgactcg tctgctacct gacggctcgg
     1741 agctgcaacg gaaggtgccg cgaccgacgg cgtttcggcc cgactcgcgc tcgcgaacgg
     1801 cggtacggca ggctcgttcg ccgcagcggt cgcgagcgtg cgctcgttcg gcgcacgttc
     1861 ggcgccggcc gacaccggtg cgggcagggt ggtcggtggc gacgccgcgg gcggcggcag
     1921 gaccaccgtg cgctggagcg caggctcggg acgagtcgcg gcggtgtcgg cgtccgagcg
     1981 cgtgctctgc caccacgcgc cggcgagcac gagcaccgcg actccgagcg ccgcgatcgc
     2041 ggccacggcc cagcgcggca acggcggcgg caccgtcgcc agcgggacgt gcgcgagccc
     2101 cggtaccgtg gagcgctggc gttcgtgctc ggacttgcgg agcgcatcga ggatgaacga
     2161 cacgtcaatg ctcctcgatc agcgaaggcg tatcgggcag gtcgagctcg gccaccatcg
     2221 cgacttgtgt tcgcacgccg acgatgccgt ctaccacgag ctgatggctc tcttggtacg
     2281 ccctgacgcg gcgttcgagc gagtcgtcgt agagggtcga gccgtcgctc ggcggcgtct
     2341 cgccggcgag gctcgccagt gtggcgcgca gccagcgcac accgacgtcg tcgtcaccgg
     2401 gtgccaggtc cgtgcccggc gcgtcgccgg ggcgccagag caacaggtgg tccccgtacc
     2461 aatagaagct gagctcggcg agcggcaact cgaacgtgcg cccgttcgca accagccgcg
     2521 catggtcgta gccgagcgac gagaccacga caggatgctc ccggccgtcc ggtccgacga
     2581 gtgacagaat cgtcggccaa tcgacccgac gcagctcact gagcgtgccg cggcgttgaa
     2641 acaggcagcg caagccttgc tcgaccgcct gttcgcacgg gtcgccgcgc gcgggatcgt
     2701 agcgcgcacc ccaaagcgcc agcagctcgg caatcgctcg atcggtgtcg accacgaact
     2761 cggggtcggc aagcagagat tgcagcgtgg ccggcgacgc cctctgctgc tcgtcggtgc
     2821 ccgggtcggc tgcggcgacg ccgagctcga cggcgcgctc gttcgtagat gacgcgacga
     2881 gtctctcgac caccgggctc ggagcggacg gcgtagcgcc gagcaatacc tgcggctctt
     2941 gttgcagcac cgccggcgcg ggcgtttcgc gcagattcgt cacgccgaac aacaacgcga
     3001 gcacgccggc cgcggcggtt gcggccggcc accatggcgt gcgtctgcgc cggatgccga
     3061 atacctcggc ggcggccgcg ccgacgagct tcgtgtcgac gttacgccgg tcctgtgtgt
     3121 aggccgcgag caaagcccgg tcggcgatca cgttgatcag gcgcggaatc ccgcgcgcct
     3181 gtctatgcag cgcgcggatc gccgacttcg tgaagatgtc gctttgcgcg ccggcgaccc
     3241 gcagccggtg attcacgtag gcacgcgtgt cgtggccgtc gagcggctcc aggtgatagc
     3301 gccccgtgat ccgctgtgcg atctgccgca tctcgggccg gtcgagcacg tcacggagct
     3361 ccggttggcc gatcaggatg atctgcagca gcttc
//
LOCUS       DATCUD010000390         2409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_25235, whole genome shotgun sequence.
ACCESSION   DATCUD010000390 DATCUD010000000
VERSION     DATCUD010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2409
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25235"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1241
                     /locus_tag="VIQ99_05790"
     CDS             <1..1241
                     /locus_tag="VIQ99_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011564544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HEY9182690.1"
                     /translation="SWRETCALFDQSHHMTDLYLEGPDALKLISALGVNTFTNFRVDT
                     AKQFVACNHDGYVIGDAILFHLAPNSFVLVGRPPALNWVQYNLETGNYNARAERDERS
                     FVNKTGGRRVYRYQVQGPNAKKVMEKVTGKPVPEIKFFNMNVFDIAGCKVRALRHGMV
                     GQPGWEIFGPWADADKVRDAIVEAGREFGIRKVGARTYPTSTLESGWIPSPLPAVYTG
                     DAMKPYREWLKGTSYEATASLGGSFVAKNIESYYLTPYDLGYGGFVRFDHDFVGRAAL
                     EKIAKKPKRQKVTLVWNGDDVDKVFSRLFHAGKFTKYIDLPLANYSTLPFDKIVKGGK
                     TVGVSTYTGYSFNERAMLSLACIDVKHAKPGTKVAVVWGEDGGGTKKPTVERHNQATI
                     RATVQPAPYGETARVAYRPK"
     gene            complement(1263..>2409)
                     /locus_tag="VIQ99_05795"
     CDS             complement(1263..>2409)
                     /locus_tag="VIQ99_05795"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015171 - amino acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY9182691.1"
                     /translation="AEPGAASFADHARTGLGPWAGFVCGWLYWYFWVVVVGIEAIAGA
                     VILQAWLPLPVWQIGLVLMVALTATNLLSTRSYGEFEFWFASIKVAAIVAFILVAGSY
                     ALGFTSPTGSTLGNLVAHGGFAPFGVAAVLAGVTGIVFSMTGAEIVTVVAAESSEPSH
                     AIANMTTALILRILLFYVGSVFFILAVVPWTEIAPSSSPFALALARMQIPFAATIMNL
                     IVLVAVLSCLNSGLYVTSRMLFRLAAHGEAPRSMVALDSRGVPTRAILIGSAFGYLAV
                     IASIVSPQLLFTFLVNASGAIMLVIYLVVALAQIRWRRSVERDAPARLTIRMWLFPWL
                     SYATIAGIALVLVSMLFRDAERAQLAASTLSVAVVLGAFWWQRRRRS"
BASE COUNT          511 a          797 c          775 g          326 t
ORIGIN      
        1 gctcctggcg cgagacttgc gcgctgttcg accagtcgca tcacatgacg gacctctatc
       61 tcgagggccc cgacgcgctg aagctgatct ccgcgctcgg cgtcaacacg ttcacgaact
      121 tccgcgtgga cacggcgaag caattcgtcg cgtgcaacca cgacggctac gtgatcggcg
      181 acgcgatctt gttccacctg gcgccgaata gcttcgtgct cgtgggtcgc ccaccggcgc
      241 tgaattgggt gcagtacaac ctcgagaccg gcaactacaa cgccagggcc gagcgcgacg
      301 agcgctcgtt cgtgaacaag accggcggcc gccgcgtgta tcgctaccag gtccaaggcc
      361 cgaacgcgaa gaaggtcatg gagaaggtca cgggcaagcc cgtgcccgag atcaagttct
      421 tcaacatgaa tgtgttcgac atcgcgggct gcaaggtccg cgcgctgcgt cacggcatgg
      481 tgggtcagcc cggatgggag atcttcggcc cgtgggccga cgccgacaaa gtccgtgacg
      541 cgatcgtcga ggcaggccgc gagttcggca tccgcaaggt cggcgcacga acgtatccga
      601 ccagcacgct cgaatccggt tggattccct cgccactgcc ggccgtctat accggcgatg
      661 cgatgaagcc gtaccgcgag tggttgaaag gcacgagcta cgaagccacg gcctcgctcg
      721 gcggcagctt cgtcgcgaag aacatcgaga gctactacct cacgccgtac gacttgggct
      781 acggcggctt cgtgcggttc gaccacgatt tcgtcggccg cgccgcgctc gagaaaatcg
      841 cgaagaagcc gaagcgccag aaagtcacgt tggtgtggaa tggcgacgac gtcgacaagg
      901 tgttcagccg gctgttccac gccggcaagt tcacgaagta catcgacctg ccgctcgcga
      961 actactcgac gctgccgttc gacaaaatcg tgaagggcgg caagaccgtc ggcgtctcga
     1021 cgtatacggg ctacagcttc aacgagcgcg cgatgctgtc gctcgcgtgc atcgacgtga
     1081 agcacgcgaa gcccggcacg aaggtggccg tggtgtgggg cgaggacggc ggcggcacaa
     1141 agaagccgac ggtcgagcgc cacaaccaag ccacgatccg tgcaaccgtg cagcccgcgc
     1201 catacggcga gacggcccgc gtcgcgtacc ggccgaagta gccggcccgc cgcgctcgga
     1261 cctcaagatc ggcgccgacg ctgccaccag aaggcgccga gcaccacggc caccgacaac
     1321 gtgctcgcgg cgagctgagc gcgctcggca tcgcggaaca gcatcgagac gagcacgagc
     1381 gcgatgccgg cgatcgtcgc atagctgagc cacgggaaca gccacatcct aatagtgagt
     1441 cgtgccggtg catcgcgctc gacgctgcgg cgccagcgaa tctgcgcgag cgctacaacc
     1501 aagtagatta cgagcatgat cgcgccggat gcgttcacga gaaacgtgaa cagcagctgc
     1561 ggcgagacga tcgacgcgat cacggcgaga tagccgaacg cgctgccgat caagatcgcg
     1621 cgggtcggca caccgcgcga gtcgagcgcg accatcgagc gcggcgcctc gccgtgtgcg
     1681 gcgagccgga acaacattcg cgacgtcaca tatagccccg agttcaggca cgacagcacg
     1741 gccacgagca cgatcaaatt catgatcgtg gccgcgaacg ggatctgcat gcgcgcgagc
     1801 gcgagcgcga acggcgagga gctcggcgcg atctcggtcc acggcacgac cgcgaggatg
     1861 aagaacaccg agcccacgta gaacagcagg atccgcagga tcaacgcggt cgtcatgttc
     1921 gcgatcgcat gcgacggctc cgacgactcc gcggccacga ccgtcacgat ctcggctccg
     1981 gtcatcgaga acacgatgcc cgtgacgccc gcgagcacgg ccgcgacgcc gaacggcgcg
     2041 aagccgccgt gcgcgacgag gtttccgagc gtcgatcccg tcggcgacgt gaagccgagc
     2101 gcatagctgc ctgcgacgag aatgaaggcc acgatcgccg cgaccttgat tgacgcaaac
     2161 cagaactcga actcgccata cgaccgcgtc gacaggaggt tcgtcgcggt caacgcaacc
     2221 atgagcacga gaccgatctg ccaaaccggc aacggcagcc aggcttgcag gatcacggcg
     2281 cctgcgatcg cctcgatgcc cacgacaacg acccagaagt accaatagag ccaaccgcac
     2341 acgaacccgg cccaagggcc gagaccggtg cgcgcgtgat ctgcgaacga cgcggcaccg
     2401 ggctcggcc
//
LOCUS       DATCUD010000391         1781 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53544, whole genome shotgun sequence.
ACCESSION   DATCUD010000391 DATCUD010000000
VERSION     DATCUD010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53544"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VIQ99_05800"
     CDS             <1..834
                     /locus_tag="VIQ99_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019643922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY9182692.1"
                     /translation="AYSGVLLPGVDHLRHTHLPENAFSRGQPARGAELADELERIVAL
                     HDASNIAAVVVDPIAASGGVLLPPKGYLERLREICTRHGILLVFDEVITGWGRLGTPF
                     AAQHFGIEPDLITFAKGITSGAVPLGGVIVRDSIYETFTGAQGPGIEFFHGYTYSGHP
                     LACAAGIATLDTYEEEALFKNAASLAKDFEQGIHSLKELPNVVDCRNLGLIGAVELSL
                     LPGAPYGTRAFEVFERCWDKGVFVRPVGETIAFCPPLIAEKKHLDQMFGVVAEVLNEI
                     A"
     gene            complement(836..>1781)
                     /locus_tag="VIQ99_05805"
     CDS             complement(836..>1781)
                     /locus_tag="VIQ99_05805"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016813 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in linear
                     amidines [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase/carbamoylase family amidase"
                     /protein_id="HEY9182693.1"
                     /translation="GVLAGLEVLRTLNDKSISTKRPVEVVDWTNEEGARFSPPMIAAG
                     AFAGVYAVDWVLERRDDDGKRFGDELARIGYAGAAPVGGRELDSYFELHIEQGPLLDA
                     KGVDVGVVTHGYTAHGFIVEVTGETAHTGPWPMDKRRNALVGAAMLAMAAHDIGWKYH
                     ATQGKGTAARIVAWPNKPGILSDWAQFTGDLRHENPHAAVRMLNDFKLAMAECARRAN
                     VDMRIVEQWTWNAELFDPECIALVRDTARRLGLGSLDLPSQAGHDAYHVARVAPTAMI
                     FSPCKDGITHNNKEHADLERTVPAVNVLANVVLERANR"
BASE COUNT          265 a          604 c          610 g          302 t
ORIGIN      
        1 gcctacagcg gcgtgctgct gcccggggtg gaccatctgc gccacacgca ccttccggaa
       61 aacgctttct cgaggggaca gccggcgcgc ggcgccgagc tcgccgacga gctcgagcgc
      121 atcgtcgcgc tgcacgatgc ctcgaacatc gccgcagtcg tcgtcgaccc gatagcggcc
      181 tcgggcggcg tgctgctgcc gcccaagggc tacctcgagc gtctgcgcga gatctgcacg
      241 cgccacggga tcctgctcgt gttcgacgag gtgatcacgg gctggggccg gctgggcacg
      301 cccttcgccg cgcagcactt cggcatcgag cccgacctca tcactttcgc gaagggcatc
      361 acctcgggcg cggtgccgct cggcggcgtg atcgtcaggg actcgatcta cgagacgttc
      421 accggcgcgc aagggccggg catcgagttc ttccacggct atacctattc cgggcatccg
      481 ctcgcctgcg ccgccggcat cgcgacgctg gacacgtacg aggaagaggc tctgttcaag
      541 aacgcagcga gcctcgcgaa agacttcgaa cagggcatcc actcgctcaa ggagctgccg
      601 aacgtggtcg actgccgcaa cctcggcctg atcggcgcgg tggagctatc gctccttccc
      661 ggcgctccct acggcacgcg cgcgttcgag gtgttcgaga ggtgctggga caagggcgtg
      721 ttcgtgcgcc cggtgggcga aacgatcgcc ttctgcccgc cgctcatcgc ggagaagaag
      781 cacctcgacc agatgttcgg cgtcgtggcc gaagtcctga acgagatcgc ctgagctagc
      841 ggttcgcccg ctcgagcacc acgttcgcga gcacgttgac cgcgggcacg gtgcgctcga
      901 gatcggcgtg ctccttgttg ttgtgcgtga tgccgtcctt gcaaggcgaa aagatcatcg
      961 ccgtgggcgc gacgcgcgcc acgtgatacg cgtcgtggcc ggcctgcgag ggcaggtcga
     1021 gcgacccgag gccgagccgc ctcgcggtat cgcgcacgag cgcgatgcat tccgggtcga
     1081 aaagctccgc gttccaggtc cactgctcga cgatccgcat gtcgacgttc gcgcgccgcg
     1141 cgcactcggc catcgccagc ttgaagtcgt tgagcatgcg tacggcggca tgcgggtttt
     1201 cgtgccgcag gtcgccggtg aactgcgccc agtcggaaag gatgccgggc ttgttcggcc
     1261 aggcgacgat gcgcgcggcc gtgcccttgc cctgggtggc gtggtatttc cagccgatgt
     1321 cgtgcgcagc catcgcgagc atggcggcgc cgacgagcgc gttcctgcgc ttgtccatcg
     1381 gccaggggcc ggtgtgcgcg gtctcgccgg tcacctccac gatgaagccg tgcgccgtgt
     1441 agccgtgggt gacgacgccg acgtcgactc ccttggcgtc gagcaggggc ccctgctcga
     1501 tgtgcagctc gaagtacgaa tcgagctcgc ggcctccgac cggcgcggcg ccggcgtagc
     1561 cgatgcgcgc gagctcgtcg ccgaaccgct tgccgtcgtc gtcgcgccgc tcgagcaccc
     1621 agtcgactgc gtagacgccg gcgaacgcgc ccgcggcgat catcggcggc gagaagcgcg
     1681 cgccttcttc gttggtccag tcgacgactt cgacaggtcg tttcgtggaa atgcttttgt
     1741 cgttaagggt gcgcaggact tccaagccgg caagcacccc g
//
LOCUS       DATCUD010000392         1876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60385, whole genome shotgun sequence.
ACCESSION   DATCUD010000392 DATCUD010000000
VERSION     DATCUD010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60385"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(310..1524)
                     /locus_tag="VIQ99_05810"
     CDS             complement(310..1524)
                     /locus_tag="VIQ99_05810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010115738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182694.1"
                     /translation="MSASPATPAQHATTTAFSVLAAISFCHLLNDMMQSLLPAIYPNL
                     KENYGLTFGQIGLLTFTFQVTASLLQPLIGAFTDKRPQPYSLAVGMGFSFVGLLLLSQ
                     AGTYALLLTAAALVGLGSAVLHPESSRVARMAAGKRPGLAQSLFQMGGNIGASIGPLF
                     AAVVVSRHGQVSVAWFALAAVLGMTLLFGVGRWYALHGMARIRAQAPRDRERVLSRGR
                     VIVTLGILVALMLSKFVYTASVTSYYTFYLTDRFEVPVRTAQLYLFVYMASVAIGTLV
                     GGSLGDRFGRKFVIWFSILGVLPFTLALPYANLFWTGVLTVPIGLILASAFPAIVVYG
                     QELVPFRVGTVAGLFFGLAFGLGGIGAALLGQLADVAGIQFVFNLCSFLPVIGLLAAF
                     LPNVAAPRVTKA"
     gene            1617..>1876
                     /locus_tag="VIQ99_05815"
     CDS             1617..>1876
                     /locus_tag="VIQ99_05815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PARP-type zinc finger-containing protein"
                     /protein_id="HEY9182695.1"
                     /translation="MTHVIEPASSGRAKCRGCNRPIAKGEMRLGERLPNAFGDGEMTL
                     WFHLRCGAYLRPETFLAAAGEAPADELLATLGTEARFGIEHRR"
BASE COUNT          404 a          618 c          600 g          254 t
ORIGIN      
        1 tagacaaact ctacgcgggc gatggggttg tagtgtagac aaatgtccga gccgatgcct
       61 aggggtcttg gcgaggaaag tgctcgcgac gtcaaggcgc ccaggccgcg cggcgtgggt
      121 ggccgaccga gtggcgcgcc gtccctccgt tgtaggcgaa cttgccagga cggctcgcgg
      181 cacagcgcga ccgtggagca tccgtactgc gtgttccgca cctgcccgcc ccgacaccga
      241 aagtgcgcgc cggttatgtc acgcgcgtga atgcggacca cgcccacgct acatattaat
      301 gatggcgggc taagccttcg tgacgcgcgg agcggccacg ttcggcaaga acgccgcgag
      361 caagccgatc acgggcagga acgagcacag gttgaagacg aactgaattc cggccacgtc
      421 cgccagctgg cccagcagcg cggccccgat gccgccgagc ccaaaggcga ggccgaagaa
      481 caaccccgcg acggttccga cgcgaaacgg caccagctct tggccataga ccacgatcgc
      541 cggaaacgcc gaagccagga tcagcccgat cgggaccgtc aacacaccgg tccagaacag
      601 gttcgcgtac ggcaacgcga gcgtgaacgg caacactccg aggatcgaaa accagatcac
      661 gaattttcgg ccgaaccgat cgccgagcga tccgccgacc aacgtgccga tggccactga
      721 ggccatgtac acgaacaaat acagctgagc ggtgcgaacc ggtacctcga agcgatccgt
      781 caaataaaac gtgtagtagc tcgtcacgct ggccgtgtac acgaacttcg acagcatcag
      841 cgcgacgaga atgccgagcg tcacgatgac tcggccacgg gacagcaccc gctcacggtc
      901 gcgcggcgct tgggcgcgga tgcgggccat gccatgcaac gcgtaccatc gaccgacgcc
      961 gaacaacagg gtcatcccga gcaccgccgc aagcgcgaac caagcgacgc taacctgccc
     1021 gtggcgcgac acgacgacgg ccgcgaacag cggcccgatc gacgccccga tattgccacc
     1081 catctgaaac agcgactgcg ccaaacccgg cctcttaccg gccgccatcc gcgcgacacg
     1141 cgaagactcg ggatgcagca cggccgagcc caagccgacg agtgccgcgg cggtcagcaa
     1201 tagcgcgtag gtaccggcct gcgacagcag cagcaatccg acgaacgaaa agcccatgcc
     1261 gaccgccagc gagtatggct gcggccgttt gtcggtgaag gccccgatca aaggctgcag
     1321 cagcgacgcc gtcacctgga acgtgaacgt caagagcccg atctgcccga aggtcagacc
     1381 atagttttcc ttgaggttcg gatagatcgc cggcaacagc gactgcatca tgtcgttcag
     1441 caggtggcag aagctgatcg ccgcgagcac cgagaacgcg gtggtcgtgg catgctgcgc
     1501 gggagtggcg ggcgaggcgc tcaaggtcgg gctcggattc gggtggcgca gtagcctaac
     1561 atcccgggca tgcgtgagcg cactcgagtg ccgagaccgc cctctataat cgacccgtga
     1621 cacacgtgat cgaacctgcg tcgagcggcc gcgccaagtg tcgcggctgc aatcgaccga
     1681 tcgcgaaggg cgagatgcgc ctcggcgaac ggctgccgaa tgcattcggc gacggcgaaa
     1741 tgacgctctg gtttcacttg cgctgcggcg cgtatctgcg acccgagacg tttctcgcgg
     1801 ccgcaggcga agcaccggcc gatgagctcc tcgcgacgct cggcacggag gcccgcttcg
     1861 gtatcgagca tcgccg
//
LOCUS       DATCUD010000393         3651 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_39355, whole genome shotgun sequence.
ACCESSION   DATCUD010000393 DATCUD010000000
VERSION     DATCUD010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3651)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3651)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39355"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..205)
                     /locus_tag="VIQ99_05820"
     CDS             complement(<1..205)
                     /locus_tag="VIQ99_05820"
                     /inference="COORDINATES: protein motif:HMM:NF014898.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEY9182696.1"
                     /translation="MSLPSDPKALVDRFLDAIWMERGLSENTLGAYRADLLALNQRLV
                     SRNVELARAGRADVLDYIAWRVEA"
     gene            533..1267
                     /locus_tag="VIQ99_05825"
     CDS             533..1267
                     /locus_tag="VIQ99_05825"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY9182697.1"
                     /translation="MNRIVHVCYGCYAWLALLLIVIPTCVVLAVAPGVERRRRVARAG
                     ARLFFRAIGSPVRVEGSSVEPHYPCVVVANHASYLDGIILTAALPAGFTYLIKHQMKR
                     VPIASFVLRRLGSAFVDRSSHGDRHRTARAMLTLASQGVGLGFFPEGTFDATPGLKPF
                     QLGAFTAAARASLPVVPIVIYGSRRKLPAGGFLPRPGPLRIRICDPVTPSHPPSPREL
                     MAETRRAMLAHLSEPDLAPDTGYMPE"
     gene            complement(1252..2904)
                     /locus_tag="VIQ99_05830"
     CDS             complement(1252..2904)
                     /locus_tag="VIQ99_05830"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012700147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEY9182698.1"
                     /translation="MSRESMEFDVVVVGAGPAGLAAACRLGQLARDHGRALSIGVVEK
                     GATVGAHIVSGAVFEPRALAELFPDWHARGAPVSTAVADERVLWLRDPARSLRLPAAC
                     VPLALHNCGNFVVSLGELCQWLAGQAEALGCHVLPGFAATDVLYDRERVAGIVTGDLG
                     RARDGSHKASFQAGYELHAKFTVFAEGCRGHLGRRLEARHGLRAGADPQHYGIGLKEI
                     WQIDRAKHRAGEILHTFGWPLDAAADGGGFVYHAAGERAYLGFIVGLGYENPHLDPFA
                     EFQRWKQHPKIRALLAGGRRIAYGARAVNKGGLQSLPKLVVPGGLLVGCEAGFLNPAK
                     IKGSHTAMKTGMLAAETIFAALALPGEAADAELARYAERVRSSWVWDELHRGRNFSAG
                     VARFGALLGGALAFVEQNVLHGRMPWTLRNRVPDHARLREAAAAAPIAYPKPDGVVSF
                     DRSSSVYLASTAHEENQPCHLELADASVPIGINLPRFDEPAQRYCPAGVYEVVADTTG
                     APRFQINAANCVHCKTCDIKDPSQNITWVPPEGGAGPNYSGM"
     gene            3039..>3651
                     /locus_tag="VIQ99_05835"
     CDS             3039..>3651
                     /locus_tag="VIQ99_05835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014085510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9182699.1"
                     /translation="MRRFITENRARLHGDDYGALYAWSIDNPDEFWASVWKFCGIRAI
                     TEYRTVLRDAARMPGATWFDGATLNFAANLLAPSRSGAALVFANERGERGEIDWAELR
                     RQVAAIAETLRALGVRKGDRVAAFIANRPEAVVAMLAAASLGAVWSSCSPDFGVDAVI
                     DRFGQIEPKVLFATDGYFYNGKSIDSLPTIHALAARLPTLESVV"
BASE COUNT          616 a         1254 c         1181 g          600 t
ORIGIN      
        1 cagcctcgac gcgccaagcg atgtagtcga gcacgtcggc gcgacccgcg cgcgcgagct
       61 cgacgttgcg cgacacgagc cgttgattca atgcgagcaa gtcggcgcga tacgcgccga
      121 gcgtgttctc ggataggccg cgctccatcc aaatcgcgtc gagaaagcga tcgacgagcg
      181 ccttgggatc gctaggtaga ctcatgcctg cctgagccgg gccgctgtgc atgaagttgt
      241 gcgccattgc ctatacgcga tcgtaaagtt cgacggtttt cgtatatgat tcagggcgtt
      301 atatccacgc tgcaacaccc gaatacggat gcggcagcgg gtcgagtatg cgggaccggg
      361 tgggtcacct gcgtgaccgc cctcacagaa aaccggcagc attaacataa agagaaacgt
      421 gtcacagaaa gccgccggaa aatcgcgtcc ggtgtcgccc ggaggcgacg cgagctttga
      481 cataaatgcc gagcccgcag cctttccccg ctttgacacc cctcgatccg ccatgaatcg
      541 catcgtccac gtctgctacg gctgctatgc ctggctcgca ctgctcctga tcgtgatccc
      601 gacctgcgtc gtgctggccg tggcacccgg agtcgagcgg cgccgccgag tggcccgcgc
      661 cggggcgcgg ctgttcttcc gcgcgatcgg cagcccggtg cgggtggaag gcagctccgt
      721 cgaaccgcac tacccctgtg tcgtagtcgc aaaccatgcc agctacttgg acggaatcat
      781 tctgacagcg gccttgccgg cagggttcac ctatctgatc aagcaccaga tgaagcgcgt
      841 gccgatcgcg agcttcgtct tgcggagact cggctccgca ttcgtggatc gatccagcca
      901 cggcgatcgc caccgcaccg cacgagccat gctgacgctc gcgtcgcaag gggtcgggct
      961 cggcttcttc ccggaaggaa ccttcgacgc gacgccggga ctcaagcctt tccagttagg
     1021 cgcgtttacg gccgcggccc gcgccagctt gccggtcgtg ccgatcgtga tctacggctc
     1081 gcgtcggaag ctgccggccg gcggattcct gccgaggccg ggcccgctcc ggatacggat
     1141 ttgcgatcca gtgacgccat cgcatccgcc ctcgccgcgc gagctgatgg cggagacgcg
     1201 tcgcgcgatg ctcgctcatt tgagcgagcc ggatctcgcg cccgataccg gctacatgcc
     1261 cgaatagttc gggccggcac cgccttcggg cggaacccag gtgatgttct gcgacggatc
     1321 cttgatgtcg caggtcttac agtgcacgca gttcgccgcg ttgatctgga accgcggtgc
     1381 gccggtcgta tcggcgacca cctcgtagac gcccgcggga cagtagcgct gcgcgggctc
     1441 gtcgaatcgc ggcaggttga tccctatcgg cacgctcgca tctgcgagct cgagatgaca
     1501 tggctgattt tcctcgtgcg ccgtgctcgc gagatacacg gagctcgagc ggtcgaaaga
     1561 gacgactccg tccggcttcg gataagcgat cggcgccgcg gccgccgctt cgcgcaggcg
     1621 cgcatgatcg ggcacgcggt tgcgcagcgt ccacggcatg cgtccgtgca gaacgttctg
     1681 ctcgacgaac gcgagcgcac caccgagcaa cgcgccgaac ctcgcgactc cggcgctgaa
     1741 attgcgcccg cggtggagct cgtcccacac ccatgagctg cgcacgcgct cggcgtagcg
     1801 cgcgagctcg gcatcggccg cttcacccgg caacgcgagc gccgcaaaaa tcgtttcggc
     1861 cgcgagcatt cccgtcttca tcgccgtgtg cgagcccttg atcttggccg gattcaagaa
     1921 tcctgcctcg cagccgacga gcagaccgcc cggaacgacg agcttcggta gcgactgcag
     1981 cccgcctttg ttgaccgcgc gcgcgccata cgcgatgcgc ctgccgccgg cgagcagcgc
     2041 gcgaatcttg ggatgctgtt tccaacgctg gaactcggcg aacggatcga ggtgcgggtt
     2101 ctcgtagccc agacctacga tgaagcccaa gtacgcgcgc tcgcccgccg cgtgataaac
     2161 gaagcctccg ccatcggccg cggcgtcgag cggccaaccg aacgtgtgca agatctcgcc
     2221 cgcgcggtgc ttggcgcggt cgatctgcca aatttccttg agcccgatgc catagtgctg
     2281 cggatccgcg cccgcgcgga gaccgtgccg cgcctcgagc cgccggccga ggtggccgcg
     2341 acacccttcg gcgaacacgg tgaacttcgc gtgcagctcg taacccgctt ggaagctcgc
     2401 tttgtgcgac ccatcgcgcg cccggccgag atcgccggtg acgatgccgg cgacgcgctc
     2461 gcgatcgtac agcacgtcgg tggctgcgaa ccccggcagc acgtgacagc cgagcgcttc
     2521 ggcctgaccc gcgagccact gacagagctc gccgagactc acgacgaagt tgccgcaatt
     2581 gtgcagcgct agcggcacgc acgccgccgg caagcgcagg ctccgcgccg gatcgcgcag
     2641 ccacaggact cgctcgtcgg cgactgcggt cgagaccggc gcaccgcgcg cgtgccaatc
     2701 cggaaacagc tccgcgagcg cgcgcggctc gaacacggct cccgagacga tgtgtgcgcc
     2761 gaccgtcgcg cctttctcga ccacgccgat cgagagcgct ctgccgtggt cgcgcgcgag
     2821 ctgacccaag cggcacgccg ccgcaagccc ggcggggccc gcgccgacga cgacgacatc
     2881 gaactccatg ctctcgcgcg acatgtgact gaggttgacc cgcggggacg ccgaagcgcg
     2941 gcgcattgta acatcgcgtc ccacatgtcc cgtcctcgtg aacgccgttg agcgcaccta
     3001 tctggcaacc ctccgcagca cgcagtgccg caagcaacat gcggcgcttc atcacggaga
     3061 atcgggcgcg gcttcacggt gacgactacg gtgcactcta tgcgtggagc atcgataatc
     3121 ccgacgagtt ctgggcgagc gtgtggaagt tctgcggcat tcgcgcgatc accgaatatc
     3181 gcaccgtgct gcgcgatgcg gcacgcatgc ccggcgcgac gtggttcgac ggggcgacgc
     3241 tgaacttcgc tgcgaacctg ttggcgccga gccgcagcgg cgccgcgctc gtgttcgcga
     3301 acgaacgcgg agagcgcggc gagatcgact gggccgagct gcgccggcag gtggccgcca
     3361 ttgccgagac cttgcgcgcg ctcggtgtgc gcaaaggcga ccgcgtcgcc gcgttcatcg
     3421 caaaccggcc cgaagccgtc gttgcgatgc tcgcggccgc aagcctcggc gcagtgtggt
     3481 cgtcgtgctc gccggacttc ggcgtcgacg ccgtgatcga tcgcttcggt caaatcgagc
     3541 cgaaggtgct gttcgcgacc gacgggtatt tctacaacgg caagagcatc gactcgctgc
     3601 cgacgatcca cgcgctcgcc gcgcgattac ccacgcttga atccgtggtc g
//
LOCUS       DATCUD010000394         2422 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_74948, whole genome shotgun sequence.
ACCESSION   DATCUD010000394 DATCUD010000000
VERSION     DATCUD010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74948"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2408)
                     /locus_tag="VIQ99_05840"
     CDS             complement(<1..2408)
                     /locus_tag="VIQ99_05840"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006914673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY9182700.1"
                     /translation="MKLKDILALLKQIYCGKLAAEFAHISRARERLWLREQFEACRVH
                     WTFTREEQTTILDSLTRAEGIERYLNTRFVGQKRFSLEGSETLIPALDDLIQRAGEAG
                     VQELVIGMAHRGRLNVLVNVLGKSPQDLFSEFEGAYDLARLKGSGDVKYHKGYSADVR
                     TPGGNVHIALAFNPSHLEIVNPVVEGSVRARQDRRGDELGKLVMPVLIHGDAAFAGQG
                     VVAETFQLSQTRAFYTGGTVHIVVNNQIGFTTSDPRDSRSTIYCSDIAKMIEAPIFHV
                     NGDDPEAAVAAVRLALKYRQEFHKDVVIDLVSYRRLGHNEADEPAATQPTMYGAIREH
                     ASVRTLYARKLTEGSVLSQEAVDKLADDYRTALDEGRNPNQHALGMIGNQYTVDWSRY
                     HGASLTDSVNTGVPEAELNRLAGLINTVPASHTLHPRVQRIMEDRRKMAAGDAGCDWG
                     FAESLAYASLLAANFHVRLIGQDSRRGTFFHRHAALVDQGSGEAFVPLAHVVTDPSAF
                     MIADSLLSEEAVLGFEYGYSTTSPDTLVIWEGQFGDFVNGAQVVIDQFISSGEAKWGR
                     LSGLTLFLPHGYEGQGPEHSSARLERFLQLCAEHNMQVVVPSTPAQMFHLLRRQMLRH
                     LRKPLVVLTPKSLLRHRLSVSSMAELSRGRFQPIIEEVEPLTDDAVTRVVFCSGKVYF
                     DLAEHRRNEGIANVAIVRIEELYPFPIEEYARVIGRYRNAKEIVWCQEEPQNQGAWYQ
                     IRHRLQEPLGKTHELYYAGRPGAAAPASGIHALHVRQQQALVGAALSSSSKERAAGLQ
                     SVGKR"
BASE COUNT          392 a          807 c          793 g          430 t
ORIGIN      
        1 cgcttgccga cggactgaag ccccgcggcg cgttccttcg aggacgacga caacgccgcc
       61 ccgacaaggg cttgctgctg ccggacatgc aacgcgtgga tgcccgacgc gggggccgcc
      121 gcgcccggcc ggccggcata gtagagctcg tgcgtcttgc cgagcggttc ctggaggcgg
      181 tgccggatct gataccaggc gccttggttc tgcggctctt cctggcacca aacgatttct
      241 ttcgcgttgc ggtagcggcc gatcacgcgt gcgtactctt cgatcgggaa cggatacagc
      301 tcctcgatgc gcacgattgc gacgttcgca atgccttcgt tgcggcggtg ctcggccagg
      361 tcgaagtaca ccttgccgct gcagaacacg acgcgcgtga ccgcgtcgtc ggtcagcggc
      421 tcgacttcct cgatgatcgg ttggaagcgg ccgcgcgaca gctccgccat gctcgatacg
      481 gacagacggt gcctgagcag gctcttcggc gtcaggacca cgagcggctt gcgcaagtgc
      541 cgcagcatct ggcgccgcag cagatggaac atctgggccg gcgtggacgg cactacgacc
      601 tgcatgttgt gctccgcgca cagttgcagg aaccgctcga ggcgtgccga cgaatgctcg
      661 ggcccttgcc cctcgtaacc gtgcggcagg aacagcgtga gcccggacag ccggccccac
      721 ttcgcctcgc ccgagctgat gaactgatcg atcacgacct gggcgccgtt gacgaagtcg
      781 ccgaactgcc cttcccaaat cacgagcgta tccggcgacg tcgtgctgta gccgtactcg
      841 aagccgagga cggcttcctc ggacaacagc gagtccgcga tcatgaacgc actcgggtcc
      901 gtcaccacat gggcgagcgg cacgaacgct tcgccgctgc cctgatcgac gagcgccgcg
      961 tgacggtgga aaaacgtgcc gcggcggctg tcctggccga tcagacgcac gtggaaattc
     1021 gcggcgagca gggacgcata cgcgaggctt tcggcgaaac cccagtcgca acccgcgtcg
     1081 ccggccgcca tcttgcgccg gtcctccatg atgcgttgca cgcgcggatg cagcgtgtga
     1141 gacgcgggca ccgtgttgat gaggcccgcg agccgattca gctcggcctc cggcacaccg
     1201 gtgttcacgg agtcggtcag cgaggctccg tgatagcggc tccagtcgac cgtgtactgg
     1261 ttgccgatca taccgagcgc atgttgattc gggttgcgcc cttcgtcgag cgccgtgcgg
     1321 tagtcgtccg cgagcttatc gacggcttcc tgcgacaaga ccgagccctc ggtgagcttg
     1381 cgcgcataca gcgtgcgcac gctcgcgtgc tcgcggatcg cgccgtacat cgtcggctgc
     1441 gtcgcggccg gctcgtcggc ctcgttgtgc ccgagacgcc gatagctgac gagatcgatc
     1501 acgacgtcct tgtggaactc ctgccgatac ttgagcgcga gccgcaccgc agccacggcg
     1561 gcctctggat cgtcgccgtt cacgtggaag atcggcgctt cgatcatctt cgcgatatcg
     1621 gagcagtaga tcgtcgagcg gctgtcgcga gggtcgctcg tcgtgaagcc gatttggttg
     1681 ttgaccacga tgtggaccgt gccgcccgtg tagaacgcgc gggtttgcga cagctggaac
     1741 gtctcggcca cgacgccctg gcccgcgaac gccgcgtcgc cgtgaatcag cacgggcatc
     1801 acgagcttgc cgagctcgtc gccgcgccgg tcctggcgcg cgcgcaccga gccctcgacc
     1861 accgggttca cgatctcgag gtgcgacggg ttgaacgcga gcgcgatgtg gacgttgccg
     1921 cccggcgtgc ggacgtcggc cgagtaaccc ttgtggtact tcacgtcgcc ggagcccttc
     1981 aggcgcgcga ggtcgtacgc gccctcgaac tccgagaaca aatcctgcgg cgatttgccg
     2041 agcacgttca cgagcacgtt gagacgcccg cgatgcgcca tcccgatcac gagctcctgc
     2101 acgccggcct ctccggcccg ctggatcaag tcgtcgagcg ccgggatcaa cgtctcgctg
     2161 ccttccagcg agaagcgctt ctgcccaacg aagcgggtgt tcagatagcg ttcgatgcct
     2221 tcggcgcggg tcaggctgtc caagatcgtc gtctgctctt cgcgcgtgaa cgtccaatgc
     2281 acgcggcacg cttcgaattg ctcacgcagc cacaagcgct cgcgtgctcg cgagatgtgc
     2341 gcgaactccg cggcgagctt gccgcaatag atctgtttca gcagcgccag gatgtccttg
     2401 agcttcatgc gggtatggcc gg
//
LOCUS       DATCUD010000395         1555 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_81968, whole genome shotgun sequence.
ACCESSION   DATCUD010000395 DATCUD010000000
VERSION     DATCUD010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81968"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1517)
                     /locus_tag="VIQ99_05845"
     CDS             complement(<1..1517)
                     /locus_tag="VIQ99_05845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182701.1"
                     /translation="MRKQDGVRLRPPRTELLPVLEIGAPALPSEELPDLVDSWAWAHA
                     QLGAHVGASEGELRDVLVNYPQLSVSRLLSPRLLKENAEYIACVVPAFEAGRLAGLGG
                     APDVNATLLPAWKSGPNAPGNVTLPVYYYWEFRTGAREDFESIVARLEPRDFADTVGR
                     RPMDLSAPGFVVPQTTPPTVIPPIMLEGALQPVKAPRAPFPDDATKTWQQKLRSIVNV
                     AGAKATDPSAEPVLGPPIYGRYYAGRNQVGTAQSPTWLDELNLDPRERVVAALGTRVI
                     QEHQEELMAEAWDQAGEMAKVNQRLRQMQLSLAITGRLHVRHVQRIDDDDTLWRFASP
                     AQSRLVMSAPANTAPVTMRSMLVASSTPTVVTSPAMRRLARPAGAISRRAATAVRMAG
                     MQAPAAADGTAISSMFRLYTAQPLSMTFTLPPTRGMVSFDAVTSRLPSQFQSMTFARG
                     NDATVGSMPPRPAFVVTGEPVTVISVIGGTVVGGGTSIAAGRPRLRPIGDGDEFP"
BASE COUNT          251 a          529 c          530 g          245 t
ORIGIN      
        1 tcggggaact cgtccccgtc accgatcggg cgcagacgcg gccggcccgc tgcgatcgac
       61 gttccacccc ccacgactgt gccaccgatg acgctgatca ccgtcaccgg ttcacccgtg
      121 accacgaacg ccggacgcgg cggcatcgag ccaacggtcg cgtcgttgcc gcgcgcaaac
      181 gtcatgcttt gaaactgcga cggcagccgg ctcgtcaccg catcgaagct caccatgccg
      241 cgcgtgggcg gcagggtgaa ggtcatcgac aacggctgcg cggtatacag acggaacatc
      301 gacgagatcg cggtgccgtc cgcggcagcc ggcgcttgca ttcccgccat gcgcaccgcg
      361 gtcgccgcgc ggcgactgat ggcgccggcc ggacgcgcca gccggcgcat cgcgggcgag
      421 gtgacgacag tcggcgtcga agacgcgacg agcatcgagc gcatcgtgac cggcgcagtg
      481 ttcgccggcg cggacatgac cagacgcgac tgggcgggtg aagcgaagcg ccacaacgta
      541 tcgtcatcgt cgatgcgttg aacgtggcgc acgtgcagcc ggcccgtgat cgccaggctg
      601 agctgcatct gccgcagacg ctgattgacc ttcgccattt cgccggcctg gtcccacgct
      661 tcggccatca gctcttcctg atgctcctga atcacgcgcg tgccgagcgc ggcgacgacg
      721 cgctcgcgcg gatcgagatt cagctcgtcg agccaggtcg gggattgcgc ggtgccgact
      781 tgattgcggc ccgcataata gcggccgtag atgggcggtc cgagcaccgg ttccgcgctt
      841 gggtccgttg ctttcgcgcc ggcgacattc acgatcgatc gcagcttctg ctgccaggtc
      901 ttcgtcgcgt cgtcggggaa gggcgcgcgc ggcgctttga ccggctgcag cgcgccttcg
      961 agcatgatcg gcgggatgac cgtcggaggg gtcgtctgcg ggacgacgaa acccggtgcg
     1021 ctgagatcca tcggacgccg tccgacggtg tccgcgaaat cgcgcggctc gagacgtgcg
     1081 acgatcgatt cgaaatcttc gcgggcgccg gtgcggaatt cccagtagta gtaaaccggc
     1141 agcgtgacat tgccgggtgc attcgggccg ctcttccatg cggggaggag cgtggcgttg
     1201 acgtccggag cgcctccgag tcccgcgagc cgtcccgcct cgaacgcagg caccacgcat
     1261 gcgatgtatt cggcgttctc tttgagcagc cgcggcgaca gcaggcgcga gaccgacagt
     1321 tggggatagt tcacgagcac gtcgcgcagc tcgccttcac tggcgcctac gtgcgcgccg
     1381 agctgcgcgt gcgcccaagc ccacgagtcg acgagatcgg gcagctcctc cgatggcagc
     1441 gctggcgctc cgatttccag caccggcagg agctcggtcc gcggcggacg cagccgcacg
     1501 ccatcctgct tgcgcacgac cacaagtacg atccacggac gcacgcggcc ttgac
//
LOCUS       DATCUD010000396         1593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10841, whole genome shotgun sequence.
ACCESSION   DATCUD010000396 DATCUD010000000
VERSION     DATCUD010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10841"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..538)
                     /locus_tag="VIQ99_05850"
     CDS             complement(<1..538)
                     /locus_tag="VIQ99_05850"
                     /inference="COORDINATES: protein motif:HMM:NF036808.4"
                     /note="SAM-dependent;catalyzes the methylation of cytosine
                     at position 1962 of the 23S rRNA; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HEY9182702.1"
                     /translation="MAASVPKVWLKQGREKSLRRRHPWVFSGAIERVEGSPAPGGTVE
                     ICAASGEFLGRAAYSPTSQIRARLWTFDADEAVDAGFLRRRLERAIESRRRLGLLDAG
                     AACRLVFSESDGLPGLIVDRYADFLVCQFLSAGAESWRSTLVDLLTDLCAPRGIYERS
                     EGAGRNKEGLPARRGILAG"
     gene            641..1426
                     /locus_tag="VIQ99_05855"
     CDS             641..1426
                     /locus_tag="VIQ99_05855"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9182703.1"
                     /translation="MDLGLRGKNAAITGSSQGIGYAIATALAKEGCNVALSARNSERL
                     DAAAATLRGHGIKAVGIVADLATEGGCKEFVEKAAAELGGLDILVNNVGGMIPGTLET
                     LNAETWTKALNVNLMATVYATKYALPFIKRSRMGRILNVSGVSGKQLVPGALTTTIPN
                     AGIIAFSKLMAGDLGAQGITVNNICPGFTKVDSWGPRAEAMAKVRGITADQVRAGIAN
                     QTLLGRWAEPEEIGNVAAFLVSDKNTYMTGTTVEVCGGFNRYI"
BASE COUNT          295 a          537 c          519 g          242 t
ORIGIN      
        1 cgccggccaa gatcccgcgc cgcgccggca gcccttcttt gtttcgaccc gcgccctccg
       61 agcgctcgta aatgccgcgc ggcgcgcaca ggtcggtcag caggtcgacc aacgtggacc
      121 gccacgattc ggccccggcc gacaggaact gacacacgag gaaatccgca tagcggtcga
      181 cgatcaggcc gggcaagccg tccgactcgg agaacacgag ccggcaggcc gcgcccgcgt
      241 cgagcagccc caggcgccgc cgcgattcga ttgcgcgctc gagtcgacgc cgcaggaacc
      301 cggcatccac ggcctcgtcc gcgtcaaacg tccagagccg tgcccggatt tgcgacgtcg
      361 gcgagtaggc cgcgcgaccg agaaactcgc cggacgcggc gcaaatctcg acggtaccgc
      421 cgggcgcggg agagccctcg acgcgctcga tcgcgcccga gaaaacccat gggtggcgtc
      481 ggcgaagcga cttctcgcgc ccttgcttga gccagacttt ggggacggat gcggccatcg
      541 ttgtggatac tgttttggcc cggcattcta acgcggccgg ttttgtgttc ctgcgatccg
      601 gcataattcg agcccgtcgg cagcatatcg gagcacgctt atggatctcg gtctgcgggg
      661 taagaacgcg gcgatcacgg gctcgagcca ggggatcggc tacgcgatcg cgacggcgct
      721 cgcgaaggag ggctgcaacg tcgcgttgtc cgctcgtaat tccgagcgcc tcgacgccgc
      781 ggcggcgact ctacgcggtc acggcatcaa ggccgtcggc atcgtcgccg atctcgcgac
      841 cgagggcggg tgcaaggagt tcgtcgagaa ggccgccgcc gagctcggcg gcctcgacat
      901 cctcgtgaac aacgtcggcg gaatgatccc gggcacgctc gagacgttga acgcggaaac
      961 gtggacgaag gcactgaacg tgaatctcat ggccaccgtc tatgcgacca agtacgcgct
     1021 gccgttcatc aagaggagcc ggatggggcg gatactgaac gtctccggcg tgtccggtaa
     1081 gcagctagtg cccggcgcgc tgacgacgac gattccaaac gccggcatca tcgcgttctc
     1141 gaagctgatg gccggtgacc tcggtgccca aggaatcacc gtcaacaaca tctgccccgg
     1201 cttcacgaag gtcgactcgt gggggccgcg cgccgaagcc atggccaagg tccgcggcat
     1261 cacggccgat caagtgcgcg ccggcatcgc gaatcaaacg ctgctcggcc gctgggcgga
     1321 accggaggag atcggcaacg tcgccgcatt cctcgtgtcc gacaagaaca cctatatgac
     1381 gggaacgacg gtcgaggtct gcggcggatt caaccgctat atctgattcg gccacgccca
     1441 acccgaccga cgacgaacct ccgacaccgc acgagcggca tcgtcgatca cgtccgcgac
     1501 gtcgacttgc gtgaggcgcc ctgctctctt cacgacgcgg ccatcgatca cgaccgtgtc
     1561 gacgtttgcc ggctgcgcag cttcgacgag cag
//
LOCUS       DATCUD010000397         2303 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96334, whole genome shotgun sequence.
ACCESSION   DATCUD010000397 DATCUD010000000
VERSION     DATCUD010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2303
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96334"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VIQ99_05860"
     CDS             <1..556
                     /locus_tag="VIQ99_05860"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182704.1"
                     /translation="AALAAKLEGVPVDVLINNAGIYADRSVCSDESCRGDGDTQSFGN
                     TDYALFDQIMAVNVRGPLLVSEAFIDHVRASAQKKIVSISSTNGSVTFSLGGSGAIAY
                     RASKAALNREMQLVAVHLKNEGITVLLLHPGAVLTERQANFRSFPGMVEMQPSVAGMI
                     EQIAKATIADTGRFIQYDGATAPW"
     gene            574..1065
                     /locus_tag="VIQ99_05865"
     CDS             574..1065
                     /locus_tag="VIQ99_05865"
                     /inference="COORDINATES: protein motif:HMM:NF025887.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9182705.1"
                     /translation="MNARTYGIAGLALLTVSCGQPQHPSYEEDLAAITAFNARYVGAI
                     NDGDVATLSSLTTDGHIMLMPGREPLIGKQANDEANARVAERFDIDETWTPVETVIDG
                     DLAFQRGTFVVIATPKGGGQGNAVPGHFMRIYQRQPNGEWRMTRDMFNTLSSSPNGLS
                     GGQ"
     gene            complement(1069..>2303)
                     /locus_tag="VIQ99_05870"
     CDS             complement(1069..>2303)
                     /locus_tag="VIQ99_05870"
                     /inference="COORDINATES: protein motif:HMM:NF023326.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEY9182706.1"
                     /translation="EWLVPGWLPEKIVALLRALPKEQRRALVPLPDTAKAALAAMGSR
                     AGRQPLAIALAEGVRAARGTELPVAAFEERSLPAHLQMRIAVVDAAGVERGAGRDLRE
                     LQRVLGTPRASAAPAGAEQWRRVGVARWDFGDLPETVIVAERPRNLVLYPCLVDNAGR
                     VDLRLEPPGAAAVALHRAGVRRLLLKALPQQAALVREHTLADRGLLLAYHGIGDGAAL
                     VDDVLSAAAEDVFELDPPVRSGAAFAACLERGRANLVAAADELRELLHALLPVYRILK
                     RELEAAADRDAHAAVRDDLVAQLAALVGPRMLTTTPREWRRHLPRYLAAAELRWQKRV
                     QRAEAERAAQAREAAARLEQWQATRPQGLPWPSPIVEYRWLVEELRVSLFAQQLGTAR
                     SVSAKRVEQAWRNAFGSA"
BASE COUNT          405 a          803 c          760 g          335 t
ORIGIN      
        1 cgccgcgctc gccgcgaaac tcgagggcgt gcccgtggac gtgctgatca acaacgccgg
       61 catctacgcc gatcgcagcg tctgcagcga cgaatcgtgc cgtggcgacg gcgacacaca
      121 gagcttcggc aacacggact acgcgctgtt cgatcagatc atggccgtga acgtgcgggg
      181 accgctgctc gtgtccgaag cgttcatcga ccacgtgcgc gccagcgccc agaagaagat
      241 cgtgtcgatc agctcgacga acggctcggt cacgttctcg ctcggaggct ccggcgcgat
      301 cgcgtatcgc gcgagcaagg cggcgttgaa tcgtgagatg cagctcgtgg ccgtgcacct
      361 gaagaacgaa ggcatcaccg tgctgctgct gcacccgggc gccgttctca cggagcgcca
      421 ggctaatttc aggagcttcc ccggcatggt cgagatgcaa ccgagcgtcg ccggcatgat
      481 cgagcaaatc gcgaaagcta cgatcgcgga cacgggccgt ttcatccagt acgacggcgc
      541 gacggcgccg tggtagagca cgaggtacca cgcatgaacg ctcgcacata cgggatcgcc
      601 ggcctcgcgc tgctcaccgt cagctgcggc cagccgcagc acccttcgta cgaggaagac
      661 ctcgcggcga tcacggcatt caacgcacgc tacgtcggcg cgatcaacga cggcgacgtc
      721 gccaccttga gtagtctgac gaccgacggc catatcatgc tgatgccggg ccgcgagccg
      781 ctgatcggta agcaagcgaa cgacgaagcc aatgcccgtg tcgccgagcg tttcgacatc
      841 gacgagacgt ggacgcccgt cgagaccgtg atcgacggcg acctcgcgtt ccaacgcggc
      901 acgttcgtcg tgatcgcgac gccgaagggc ggcggccagg gcaacgcggt tcccggccac
      961 ttcatgcgca tctaccagcg ccagccgaac ggcgagtggc gcatgacgcg ggacatgttc
     1021 aacacgctga gctcgtcgcc gaacggcttg tccggcggcc aataggcctc aggcactccc
     1081 gaaagcgttg cgccacgcct gctccacgcg tttagccgac accgagcgcg cggttccgag
     1141 ctgctgtgcg aacagcgaca cgcgcagctc ttcgacgagc caacggtact cgacgatcgg
     1201 gctcggccac ggcagtccct ggggccgcgt cgcctgccat tgctcgagtc gcgcagcggc
     1261 ttcgcgagct tgtgcggcac gctcggcctc cgcgcgctga acgcgttttt gccagcgcag
     1321 ctcggcagcc gcgagatagc gcgggagatg tcggcgccat tcccgcggag tcgtcgtcaa
     1381 catgcgtggg cctacgagcg ccgcgagctg tgccacgagg tcgtcgcgga ctgccgcgtg
     1441 ggcgtcgcgg tccgctgccg cttcgagctc acgcttgagg atcctataga ccggcagcag
     1501 tgcgtgcagc agttcgcgga gctcgtcggc tgcggcaacg agattcgcgc ggcctcgctc
     1561 gaggcacgcc gcgaatgcgg cgcccgaacg aaccggcgga tcgagctcga acacgtcctc
     1621 ggcggcggcc gacagcacat cgtcgacgag cgcggcacca tcgccgattc cgtgatacgc
     1681 gaggagcagg ccgcgatccg ctagcgtgtg ttcgcggact agagctgcct gttgcggcag
     1741 tgccttcaag agcaagcggc ggacaccggc gcggtgcagc gcgacagccg cggcaccggg
     1801 aggctcgagt cgcagatcca cgcgccccgc attgtcgacg aggcacggat acaggacgag
     1861 attgcgcggc cgctccgcga cgatcaccgt ctccggcaag tcgccaaaat cccaacgtgc
     1921 tacgcccacg cgtcgccact gctccgcacc ggccggcgct gcgctcgcgc gcggcgtgcc
     1981 gagcactctc tgcagctccc gcaggtcgcg gccggccccg cgttcgacgc ccgcggcatc
     2041 gaccacggca atccgcatct gcaagtgcgc aggcaacgag cgttcctcga acgcggcgac
     2101 cggcaactcc gtaccccgag ccgcacgcac gccctcggcc agtgcaatcg caagcggctg
     2161 gcgaccggcg cgggagccca ttgcggcgag cgcggccttt gccgtatcgg gcaacgggac
     2221 gagcgcgcgc cgctgctctt tcggtagggc tcgcaacagt gcgacgattt tttccggcaa
     2281 ccaacccggc acgagccact cga
//
LOCUS       DATCUD010000398         1614 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10850, whole genome shotgun sequence.
ACCESSION   DATCUD010000398 DATCUD010000000
VERSION     DATCUD010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1614
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10850"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..361)
                     /gene="rpsJ"
                     /locus_tag="VIQ99_05875"
     CDS             complement(50..361)
                     /gene="rpsJ"
                     /locus_tag="VIQ99_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011137734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEY9182707.1"
                     /translation="MANQNIRIRLKAFDHRLIDKSAREIVETAKRTGATVKGPVPLPT
                     KIERYDVLRSPHVNKTSRDQFEIRTHLRLMDIVDPTDKTVDALMKLELPAGVDVQIKL
                     N"
     gene            complement(380..1570)
                     /gene="tuf"
                     /locus_tag="VIQ99_05880"
     CDS             complement(380..1570)
                     /gene="tuf"
                     /locus_tag="VIQ99_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011330929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEY9182708.1"
                     /translation="MSKEKFARTKPHVNVGTIGHVDHGKTTLTAALTKVMAAKHGGTF
                     MAYDQIDKAPEEKARGITIATAHVEYESDARHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPYIVVYMNKADMVDDKELLELVELEVRDLLTT
                     YEFPGDKTPIVIGSALKALEGDTSELGTKSVEKLVAEMDKYIPMPERLIDGPFLMSIE
                     DVFSISGRGTVVTGRIDRGVIKVGDEIEIVGLRPTQKTICTGVEMFRKLLDEGRAGDN
                     VGVLLRGTKREEVERGQVLAKPGSITPHTKFECEVYVLSKEEGGRHTPFFPGYRPQFY
                     FRTTDVTGAVELPANTEMVMPGDNIQMKVELISPIAMEEGLRFAIREGGRTVGAGVVA
                     KIIQ"
BASE COUNT          274 a          575 c          417 g          348 t
ORIGIN      
        1 caccggcaaa tcactagtac aacgaccgtc ataggcggcg gcggccgagc taattgagct
       61 tgatctggac gtccactccg gccggcagct cgagcttcat cagcgcatca acggttttat
      121 ccgtcggatc aacgatatcc atcaggcgca gatgggtgcg aatctcgaat tgatcgcgcg
      181 aagtcttgtt cacgtgcggg gaacgcagca cgtcgtaacg ctcgatcttc gtcggcagcg
      241 gcacgggacc cttgacggtc gcgcccgtgc gcttggccgt ctcgacgatc tcgcgcgccg
      301 acttgtcgat caagcgatga tcgaacgctt taagccgaat tctaatattt tgatttgcca
      361 tgattttctc tcaaattcct tattggatga tcttcgcgac gacgccggcg cccacggtgc
      421 ggccgccctc gcggatcgcg aaccgcaagc cctcttccat cgcgatcggg gagatcagct
      481 ccaccttcat ctgaatgttg tcccccggca tcaccatctc ggtgttcgcc ggcaactcca
      541 ccgctcccgt cacgtccgtc gtgcggaagt aaaactgcgg ccggtacccc gggaaaaacg
      601 gcgtgtgccg acccccctcc tccttggaga gcacgtacac ctcgcactcg aacttcgtgt
      661 gcggcgtgat cgagcccggc ttcgccagca cctgcccacg ctccacttcc tcgcgcttcg
      721 tgccgcgcaa cagcaccccg acgttgtcgc ccgcgcgacc ctcgtccaag agcttcctga
      781 acatctccac acccgtgcag atcgtcttct gcgtcggccg taaccctacg atctcgatct
      841 cgtcgccgac tttaatcacg ccccgatcga tacgccccgt caccaccgtg ccacggcccg
      901 agatcgaaaa gacgtcctcg atcgacatca ggaacggccc gtcgatcaac cgctccggca
      961 tcgggatgta cttgtccatc tccgccacca gcttctcgac gctcttcgtc ccaagctccg
     1021 acgtatcccc ttccagcgcc ttcagcgcgc tgccgatcac gatcggcgtc ttgtcgccgg
     1081 ggaattcgta cgtggtcaat agatcccgga cctcgagctc gacgagctcg agcagctcct
     1141 tgtcgtcgac catgtccgcc ttgttcatgt acaccacgat gtacggcacg ccgacctggc
     1201 gggcgagcaa aatgtgctcg cgcgtctgcg gcatcggtcc gtccgcggcc gacaccacca
     1261 gaatcgcccc gtccatctgc gccgcgcccg tgatcatgtt cttcacgtag tcggcgtgac
     1321 ccgggcagtc cacgtgcgcg tagtgccgtg cgtcgctctc gtactccacg tgcgccgtcg
     1381 caatcgtgat gccgcgcgcc ttctcctccg gcgccttgtc gatctggtcg tacgccatga
     1441 acgtaccgcc atgcttcgcc gccatcacct tcgtcaacgc cgccgtcaac gtcgtcttcc
     1501 cgtgatcgac gtgcccaatc gtccccacgt tcacgtgcgg cttcgttcga gcgaattttt
     1561 ctttggacac ggctgttacc tcttcctaga ttttttgcga attgatgtcg ggcc
//
LOCUS       DATCUD010000399         1723 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_32388, whole genome shotgun sequence.
ACCESSION   DATCUD010000399 DATCUD010000000
VERSION     DATCUD010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1723
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32388"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VIQ99_05885"
     CDS             <1..462
                     /locus_tag="VIQ99_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_031433237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HEY9182709.1"
                     /translation="RHTSFAAVFVSPEIDDDIEIELNPADLRVDVFRASGAGGQHVNK
                     TESAIRITHIPTGIVVQCQNERSQHKNRATAMSQMRAKLYELEEQKRKEQAQIVEDNK
                     ADIGWGNQIRSYVLDQSRVKDLRTNFESGQPQAILDGDLDDFLQESLKQGL"
     gene            473..>1723
                     /gene="lysS"
                     /locus_tag="VIQ99_05890"
     CDS             473..>1723
                     /gene="lysS"
                     /locus_tag="VIQ99_05890"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011812866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEY9182710.1"
                     /translation="MTDHDEPENRLIAERRAKLSRLREAGNPYPNDFRRDALADELHA
                     AYESHSAESLAASPITVNVAGRLMIKRVMGGTSFAKLQDRSGQIQLMLKRDRLTEPAY
                     AEFKKWDIGDIAAARGEVIKTKTGELSIDVAEIRLLAKSLRPLPEKWHGIADAETKLR
                     QRYLDLIMSADTREVFRRRTALMRFVRSYLDVLDFAEVETPMMQPIPGGAAARPFVTH
                     HNALDATLYLRIAPELYLKRLLVGGFERVYELNRVFRNEGLSTRHNPEFTMLELYQAY
                     ATYRDVMALTENLLRGAAQALTGSTTVDYQGERYDLAPKFEEITLEAAVEKANPSLAG
                     GRVRDRAALVAACAAHGIQASAGAGPGKLQFELFEKTVESTLRGPVFVTQYPAEVSPL
                     ARCNDADPFLTDRFELFIGGRELAN"
BASE COUNT          335 a          538 c          580 g          270 t
ORIGIN      
        1 cgccacacgt cgttcgccgc ggtgttcgtg tctccggaga tcgacgacga catcgagatc
       61 gagctgaacc ccgccgatct gcgcgtcgac gtgtttcgcg cgagcggcgc gggcggtcag
      121 cacgtcaaca agacggagtc ggcgatccga atcacgcaca ttccgacggg catcgtcgtg
      181 cagtgccaga acgagcgctc gcagcacaag aaccgcgcga cggcgatgag ccagatgcgt
      241 gccaagctgt acgagctcga agagcagaaa cgcaaggagc aggcgcaaat cgtcgaggac
      301 aacaaggccg acatcggttg gggcaatcag attcgctcgt acgtgctcga tcagtcgcgc
      361 gtgaaggatc tgcgcacgaa cttcgagagc ggacaaccgc aggcgatact cgacggcgat
      421 ctcgacgact ttctgcaaga aagcttgaag caaggtttgt aagagacgag cgatgacaga
      481 tcacgacgaa ccggagaaca ggctcatcgc cgaacggcgc gcgaagctct cgcggttgcg
      541 cgaggccggt aacccgtacc cgaacgattt tcgccgcgac gcgctcgccg acgagctgca
      601 cgccgcgtac gaatcgcaca gcgcggagtc gctggctgcg agcccgatca ccgtgaacgt
      661 ggccggccgg ctcatgatca agcgcgtgat gggtggcact agcttcgcga agctgcagga
      721 ccgctcgggg cagatccagc tcatgctgaa gcgcgaccgg ctcacggagc ccgcgtatgc
      781 cgagttcaag aaatgggaca tcggcgacat cgcggccgcg cgcggcgagg tgatcaagac
      841 caagaccggc gagctctcga tcgacgtcgc cgagatccgg ttgctcgcga agtcgctgcg
      901 gccgttgccg gagaagtggc acggcatcgc cgacgccgag accaagcttc ggcagcgcta
      961 tctcgacctg atcatgagcg ccgatacgcg cgaggtgttt cgccggcgca ctgcgttgat
     1021 gcgtttcgtc aggagctatc tcgacgtgct cgatttcgcc gaggtcgaga cgccaatgat
     1081 gcagccgatc ccgggcggtg cagcggcgcg gccgttcgtg acgcatcaca acgcgctcga
     1141 tgccacgctg tatctgcgca tcgcgcccga gctgtacttg aagcgcttgc tggtcggcgg
     1201 cttcgagcgc gtgtacgagc tgaaccgcgt gttccgcaac gagggtctat cgacgcggca
     1261 caaccccgag ttcacgatgc tcgagctgta ccaagcgtac gcgacctatc gcgacgtgat
     1321 ggcgctgacc gagaacttgc tgcgcggtgc cgcacaggcg ttgacgggca gcacgaccgt
     1381 cgactaccaa ggtgagcgct acgatctcgc gccgaagttc gaggagatca cgctagaggc
     1441 cgcggtcgaa aaggcaaacc cgtcgctcgc gggcggacgc gtgcgcgatc gtgccgcgct
     1501 cgtcgcggcg tgtgcggcgc acggcattca ggcgagcgca ggcgccggcc cgggcaagct
     1561 gcagttcgag ctgttcgaga agacggtcga gtcgacgctg cgcggtcccg tgttcgtgac
     1621 gcagtatccg gccgaggttt cgccgctcgc gcgctgcaac gacgcggatc cgttcctgac
     1681 ggaccggttc gagctgttca tcggcggccg cgagctcgcg aac
//
LOCUS       DATCUD010000400         2346 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53626, whole genome shotgun sequence.
ACCESSION   DATCUD010000400 DATCUD010000000
VERSION     DATCUD010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53626"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..371)
                     /locus_tag="VIQ99_05895"
     CDS             complement(<1..371)
                     /locus_tag="VIQ99_05895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017500280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY9182711.1"
                     /translation="MHDALPIAADVAEAYLRLREWVVETPVLESAALNERLGVRVLLK
                     AECLQHTGSFKIRGALNRLLKLKADEREAGVVAFSSGNHAQAVALAAHWLGVRAAIVM
                     PSDAPAVKLESTRAWGAEVVL"
     gene            443..1906
                     /locus_tag="VIQ99_05900"
     CDS             443..1906
                     /locus_tag="VIQ99_05900"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9182712.1"
                     /translation="MPPAPLVTLEHVDVKLMGSPVLHDINLTVHRGEHWGVVGANGSG
                     KSTLLSLIAGTVWPTGERGIRRYDFGDGTETDAVRARREIVVVSHELQDRYAHRGWNF
                     TALDVVLSGIYRTDVPRRRPSAAQRERAMELLRKLGIAELAERRLLELSRGEQRRVLI
                     ARGLAFAPSILLLDEPASGLDATARVDLDAMLTVVGRECTLVCAAHVPQDLPIVIPRY
                     LTIDRGRIVAREQRAHEQETAASSGAYEHAPVTAIAPSAAAPDTALIALAHADVWLAG
                     RRVLADVTWSLMPGEHWLVTGTNGSGKSTFLRLLHGQLRPALGGDVSWPALGNPRDVW
                     QLRKQVAWLSPELQAAYRYPSTVRAAIASGFTSSIGQTRAPTTDEKARVEQLLADLRL
                     APFADRLLATLSYGQMRLALIGRALATHPRVLLLDEPWEGLDAPVAELLNRTLATIMA
                     DGTQLVCASHLRAHRHHFTHELALRAGKVVRAAPTRT"
     gene            complement(1903..>2346)
                     /locus_tag="VIQ99_05905"
     CDS             complement(1903..>2346)
                     /locus_tag="VIQ99_05905"
                     /inference="COORDINATES: protein motif:HMM:NF015180.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerC domain-containing protein"
                     /protein_id="HEY9182713.1"
                     /translation="KLRYARRPDKSNDYRPHFDMFLSRYFDRIAIALSTVCIVHCLAM
                     PFVIALLPVAALTVGGDGHFHSLMLWFVVPTSVLGFGLGVRAHGRFDSVALGAVAIAG
                     LAAAALTGHESWDPSVETLVNVGASVLLAVAHWRNFREVQQAHRH"
BASE COUNT          390 a          819 c          781 g          356 t
ORIGIN      
        1 tacagcacga cctcggcgcc ccacgcgcgc gtgctttcga gcttgaccgc gggtgcgtcg
       61 ctcggcatca cgatcgccgc gcggacgccg agccaatgcg cggccagcgc gacggcctgc
      121 gcgtggtttc cggacgaaaa ggcgacgacg ccggcttcgc gctcgtcggc tttgagcttg
      181 agcaggcgat tcagcgcccc gcgaatcttg aagcttcccg tgtgctggag gcattcggcc
      241 ttcaacagca cgcgcacgcc gagacgctcg ttcaacgccg ccgactcgag caccggggtc
      301 tcgacaaccc actcgcgcag ccgcaagtac gcttcggcaa cgtcggcggc tattggcaaa
      361 gcgtcgtgca tcgctaaccc gagtggttcg cggctagtct agctcaggta cactcgcgcg
      421 gcctcgaaca aactcgccca gcatgccccc cgcccccctc gtcacgctcg aacacgtcga
      481 tgtgaagctc atgggctcac ccgtgttgca cgacatcaat ttgaccgtgc accgcggcga
      541 gcactggggc gtcgtcggcg cgaacggcag cggcaagagc acattgctga gcttgatcgc
      601 agggacggtt tggcccactg gcgagcgcgg catccgccgc tacgatttcg gcgacgggac
      661 cgagacggac gctgtccgcg cgcgccgaga aatcgtggtc gtgagccacg agctccaaga
      721 ccgctacgca caccgcggct ggaacttcac cgcgctcgac gtcgtattgt cgggcattta
      781 ccgcacggat gtgccgcggc gccggccatc cgccgcgcaa cgcgagcgag ccatggagtt
      841 gttgcggaag ctcggcatcg ccgagctcgc cgagcgcagg ctgctcgagc tctcgcgtgg
      901 cgagcagcgc cgcgtgctga tcgcgcgcgg cctcgcgttt gcgccgagca tcctcctgct
      961 cgacgagccc gcgagcgggc tcgatgccac cgcacgtgtg gacctcgacg cgatgctcac
     1021 ggtcgtgggc cgcgaatgta cgctcgtgtg cgcggcgcac gtgccgcagg acctgcctat
     1081 cgtgattccg cgctatctga cgatcgatcg gggccgcatc gttgcgcgcg agcagcgcgc
     1141 gcacgaacag gagaccgccg cctcgagcgg cgcgtacgag cacgcaccgg tgaccgcaat
     1201 tgcgcccagc gccgccgcgc ccgacacggc cctgatcgca ctcgcgcacg cggacgtttg
     1261 gctcgcggga cgacgtgtgc tcgccgatgt cacgtggagt ctaatgcccg gcgagcattg
     1321 gctcgtgacc ggcacaaacg gctccggtaa gagcacgttc ctgcgtctgt tgcacgggca
     1381 actgcgtccc gcgctcggcg gcgacgtctc gtggcccgca ctcggcaacc cgcgagatgt
     1441 ttggcagctc cgcaagcagg ttgcgtggct ctcgccggag ctgcaggcgg cctatcgcta
     1501 cccgtcgacg gtgcgggccg cgatcgcgtc gggcttcacg tcgagcatcg gccaaacgcg
     1561 tgcgccgacg actgacgaga aggcacgcgt cgagcagctg ctcgccgacc tgaggctggc
     1621 gccgtttgcg gaccgactgc tcgcgacgtt gtcgtacggg cagatgcgcc ttgcgctgat
     1681 cgggcgcgcg ctggccacgc acccgcgcgt gctgttgctc gacgagccgt gggaagggct
     1741 cgacgcgccg gtggccgagc tgctgaatcg aaccctcgcg acgatcatgg ccgacggcac
     1801 gcagctcgtc tgcgcctcgc acttgcgggc gcaccgtcac catttcacgc acgagctcgc
     1861 ccttcgtgca ggcaaagtgg tgcgggccgc cccgacgcgc acctagtgcc ggtgggcctg
     1921 ctgcacctcg cggaaattgc gccaatgagc cacggccagc agcacgctgg ccccgacgtt
     1981 cacgagcgtc tcgaccgagg ggtcccagct ttcgtggccg gtcaatgcgg cagcggcaag
     2041 cccggcaatc gcgaccgcgc ccaaggccac gctgtcgaaa cggccgtggg cgcgcacacc
     2101 gagaccgaac cccagcacgc tcgtcgggac gacgaaccac agcatcaacg aatgaaagtg
     2161 gccgtcgccg ccgaccgtga gcgcggcgac cggcaacagc gcaatcacga acggcatcgc
     2221 gaggcaatgc acgatgcaga ccgtcgacag cgcgatcgcg atgcggtcga agtacctcga
     2281 gagaaacatg tcgaagtgcg ggcggtaatc gttcgatttg tcgggccggc gagcataccg
     2341 tagttt
//
LOCUS       DATCUD010000401         1985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82022, whole genome shotgun sequence.
ACCESSION   DATCUD010000401 DATCUD010000000
VERSION     DATCUD010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82022"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1346)
                     /locus_tag="VIQ99_05910"
     CDS             complement(<1..1346)
                     /locus_tag="VIQ99_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007090956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEY9182714.1"
                     /translation="MRHIARLDDWYRFEETGPQFITGLQALVRLLLAQRHRDRLAGLD
                     TAGFVSGYRGSPLGGLDRELWRAGPHLDAAQIRFQPGLNEDLAATSIWGAQQANLFAG
                     ARYAGVFGMWYGKGPGVDRSGDPFKHGNAAGTSRYGGVLAVAGDDHTCKSSSLPHQSE
                     YAFVDASMPVLNPADVREIVAFGLMGYALSRFSGCWVGLKVTQETADATQSFALAPES
                     IEIATPDIDLPPGGLNIRWPDPPNDQELRLHRYKLPAARAFARANALDRTIIDSRHPR
                     LGLVTTGKAHLDVLQALEDLGVDAARASEVGIKLFKVGMSWPLEPEAIRRFAEGLEEI
                     VVIEEKRGLVEGQLKEQLYNWQTKQRPLIVGKHDERGEWLLPANGELTPALIARVLAK
                     RMRRFYSSTDIEDRVRFLEQQDRRLAASAVDVERLPHFCSGCPHNTSTNLPEGSRAV"
     gene            complement(1368..>1985)
                     /locus_tag="VIQ99_05915"
     CDS             complement(1368..>1985)
                     /locus_tag="VIQ99_05915"
                     /inference="COORDINATES: protein motif:HMM:NF012512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY9182715.1"
                     /translation="DRAREDREAIAHRLAAERGAVLVPPFDHADIIAGQGTAALELAR
                     FARERRLTIEALYVPCSGGGLVAGSALAIKAEFPDCTVYAVEPQGFDDTAQSLAAGKR
                     CRAARTGTTLCDGLMAAMPGAITFAVNRRELAGALVVDDAQVRAAMAFGARRLKLVLE
                     PSGAAALATVLATPPRARRCIAVMLSGGNVDAELLAEALRSEEPK"
BASE COUNT          324 a          706 c          653 g          302 t
ORIGIN      
        1 accgcgcgcg agccctccgg caggttcgtc gacgtgttgt gcgggcaacc cgagcaaaaa
       61 tgcggcaagc gctctacgtc gacggccgac gcggccagcc gacggtcttg ttgctcgagg
      121 aagcgcacgc gatcctcgat atcggtgctg gagtagaaac gccgcatgcg cttcgcgagc
      181 acgcgtgcga tcaacgcggg cgtcagctcg ccgttcgcag gcagcagcca ctcgccgcgc
      241 tcgtcgtgtt tgccgacgat cagcggccgc tgcttcgtct gccagttgta gagctgctcc
      301 ttgagctgac cctcgacgag accgcgcttc tcttcgatca cgacgatctc ctcgagcccc
      361 tcggcgaatc gccgaatcgc ttcgggctcg agcggccagc tcatgccgac cttgaagagc
      421 ttgatgccga cctcgctcgc gcgcgcggcg tcgactccca agtcctcgag cgcctgcaac
      481 acgtcgaggt gggccttgcc cgtcgtcact agacccaagc gaggatgacg gctgtcgatg
      541 atcgtacggt ccagcgcgtt ggcgcgcgcg aacgcacgcg cggccggcaa cttgtagcga
      601 tgcaaccgca gctcctgatc gttcggcgga tctggccaac ggatgttgag cccgccgggc
      661 ggtagatcga tgtcgggcgt tgcgatctcg atcgactccg gcgccaacgc gaagctctgc
      721 gtcgcgtcgg ccgtctcctg cgtcaccttg agacccaccc agcaaccgct gaagcgcgac
      781 agcgcgtagc ccatcaggcc gaacgcgacg atctcccgga cgtcggccgg gttgagcacc
      841 ggcatcgacg catcgacgaa cgcgtattcg ctctgatgcg gcagcgacga ggatttgcag
      901 gtgtggtcgt cgcccgcgac cgcgagcacg ccgccgtagc gcgacgtccc cgcggcgttg
      961 ccatgcttga acggatcgcc ggaccggtcg acacccggcc ccttgccgta ccacatgccg
     1021 aacactccgg cgtagcgcgc gcctgcgaac aaattcgcct gctgcgctcc ccagatcgac
     1081 gtggccgcga gatcttcgtt caggccgggc tgaaagcgaa tctgcgccgc atcgagatgc
     1141 gggcctgcgc gccagagctc gcggtccaag ccgccaagcg gcgagccgcg gtaaccggac
     1201 acgaaaccgg ccgtgtctag gcccgccaag cggtcgcgat ggcgctgcgc caggagcaag
     1261 cgcaccaacg cctggagccc cgtgatgaat tgcggcccgg tttcctcgaa ccggtaccaa
     1321 tcgtcgagac gcgcaatgtg tcgcagctgc accggcggca ttatgggcta tttcggctct
     1381 tcggagcgga gcgcctccgc cagtagctcc gcatcgacgt tgccgcccga cagcatgacg
     1441 gcgatgcacc ttcgggctcg tggcggcgtc gccagcacgg tcgccagagc ggcggcgccc
     1501 gaaggttcga gcacgagctt caggcgccgc gccccgaagg ccatcgctgc gcgcacctgc
     1561 gcgtcgtcga cgacgagcgc accggccagc tcgcggcggt tgaccgcaaa cgtgatcgcg
     1621 cccggcatgg ccgccatgag cccgtcacag agcgtcgtgc ccgtgcgcgc ggcgcggcag
     1681 cgcttgccgg cggcgagcga ctgagcggtg tcgtcgaagc cttgcggctc gaccgcgtac
     1741 acggtgcagt ccgggaactc cgccttgatc gcgagcgcag agccggccac gagaccaccc
     1801 ccgctgcagg gcacgtacaa cgcctcgatg gtcaagcgtc gttcgcgcgc gaaccgcgcg
     1861 agctcgagcg cggccgtacc ctgtcccgcg atgatgtccg catggtcgaa cggcggcacg
     1921 agcacggccc cgcgttcggc agcaaggcga tgcgcaatcg cctcgcgatc ctcgcgcgca
     1981 cgatc
//
LOCUS       DATCUD010000402         1748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82025, whole genome shotgun sequence.
ACCESSION   DATCUD010000402 DATCUD010000000
VERSION     DATCUD010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82025"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..483)
                     /locus_tag="VIQ99_05920"
     CDS             complement(<1..483)
                     /locus_tag="VIQ99_05920"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY9182716.1"
                     /translation="MSSRTPGAATDLDNRGRLLRAATDAFAEYGYEGTSLRVIADNAG
                     VSFQLIAYYFGSKEELWLETVDYLFERYLETGKGLGFTSSGNLAEQFHNHLRLLLTDM
                     LQRPQLRKIWIQEYLADSPRYHNIIRPKIKLLYETLSLPYFSEVVRLGIVERFTAEET
                     A"
     gene            668..>1748
                     /locus_tag="VIQ99_05925"
     CDS             668..>1748
                     /locus_tag="VIQ99_05925"
                     /inference="COORDINATES: protein motif:HMM:NF019219.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1549 domain-containing protein"
                     /protein_id="HEY9182717.1"
                     /translation="MTAVGLAGCVAPNPDLAGLAPDEIDYNWHVRPILSENCFRCHGP
                     DPSSREAGLRLDVGELAVQELPETPGRYAIVPGNPDRSELVRRIRSTDVDERMPPQST
                     HKVLTAQQIAILEQWIDDGAEYRPHWAFISPDRPPVPDITSTTRAANEIDRFVLRRLD
                     REQLAPSAEADKETLISRVTLTLTGLPPTLEQIDAFVADTRPDAYEQLVDRLLASPAY
                     AEHMANYWLDLARFSESDGFLDDHHDRLLWPWRDWVIDSFARNRPFDEFGTWQLAGDL
                     LPNATRDQILATAYLRVGKRTTENGAIDAEYKAEYMVERTDNALGTAFLGLTVGCARC
                     HDHKFDPISTQDYYALAGVFARTQYA"
BASE COUNT          315 a          581 c          562 g          290 t
ORIGIN      
        1 agctgtttcc tcggccgtga atcgctccac gatgccgagg cgcacgacct cgctgaagta
       61 cggcagcgac agcgtctcgt agagcagctt gatcttcggc cgaatgatgt tgtggtagcg
      121 cgggctgtcg gcgaggtatt cctgaatcca gatcttgcgc agctgcggcc gttgcagcat
      181 gtccgtcagc agcaagcgca gatggttgtg gaactgctcg gctagattgc ccgagctcgt
      241 gaagcccaag cccttgccgg tctcgaggta acgctcgaac aaatagtcga cggtctcgag
      301 ccacagctcc tctttcgagc cgaagtagta cgcgatcagc tgaaacgaca cgccggcgtt
      361 gtcggcgatc acgcgcaacg aagtaccttc gtaaccgtac tcggcgaacg cgtcggtggc
      421 cgcgcgcagc aatcgcccgc ggttatcgag atcggtcgcg gcaccgggtg ttcgagagct
      481 catagcggca gcctagcagt gggtggcgcg aggtggcagt ctggttgacg accgtaaatc
      541 aacgaaggta cagtcgtcaa acaaacacag cgcgggttct ccgggggatc tcgtggcgag
      601 aggccgtttt gcttcgcaaa gacgcggtcg gcgcgatgac ccgtcgatac ggtgcttcgt
      661 tctcggcttg acggccgtcg gcctcgcggg ctgcgtggcg ccgaaccccg acctcgcggg
      721 cctcgccccc gacgaaatcg actacaactg gcacgtccgc ccgatcctgt cggagaactg
      781 tttccgctgt catggaccgg atccgtcgtc gcgcgaggcc ggcctgcgac tcgacgtcgg
      841 cgagctcgcg gtgcaggagt tgccggagac gccgggccgc tacgcgatcg tgcccggcaa
      901 cccggaccgc agcgagctgg tgcgccggat ccgctcgacc gacgtcgacg aacggatgcc
      961 gcctcagtcg acgcacaaag tcctgaccgc gcagcaaatc gcgattctcg agcagtggat
     1021 cgacgacggc gccgagtatc gtccgcactg ggcgttcatt tcgccggacc ggccgccggt
     1081 ccccgacatc acgtcgacta cgcgcgcggc gaacgagatc gatcggttcg tgctgcgcag
     1141 gctcgaccgc gaacagctcg ctccatcggc cgaggccgac aaggagacac tgatcagccg
     1201 cgtcacgctg acgctgacgg gcctgccgcc gacgctcgag cagatcgacg ccttcgtcgc
     1261 cgacacgcgg cccgacgcat acgagcagct cgtcgatcgg ctgctcgcct cgcccgccta
     1321 cgccgagcac atggccaact actggctcga ccttgcacgc ttcagcgaga gcgacggttt
     1381 cctcgacgat catcacgacc gcctgctctg gccatggcgc gactgggtca tcgactcgtt
     1441 cgcacgcaat cggccgttcg acgagttcgg cacgtggcag ctcgccggcg acttgctgcc
     1501 gaacgcgacg cgcgaccaga tcctcgcgac cgcgtacctg cgcgtcggca agcgcacgac
     1561 cgagaacggt gcgatcgatg ccgagtacaa agccgagtac atggtcgagc gcacggacaa
     1621 cgcgctcggg accgcgttcc tcgggctgac ggtcggctgc gcgcgctgcc acgatcacaa
     1681 gttcgacccg atatcaacgc aagactacta cgcgctggcg ggagtgttcg cgcggacgca
     1741 gtatgccg
//
LOCUS       DATCUD010000403         4561 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75002, whole genome shotgun sequence.
ACCESSION   DATCUD010000403 DATCUD010000000
VERSION     DATCUD010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4561
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75002"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1271
                     /locus_tag="VIQ99_05930"
     CDS             <1..1271
                     /locus_tag="VIQ99_05930"
                     /inference="COORDINATES: protein motif:HMM:NF015963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9182718.1"
                     /translation="QQVLMDPRRYPGPVRPIGSGSSTTRCVTANGGTQIDLSTMNRVL
                     KIDRDTVTVQPGISLPELAEILGEEGLELVGGFDLANRTVGGAVSAAGLEASMAGDVG
                     QFASHVVQLKVLSPNGKKFVVNEKTKSLLALMRLSYGLLGVVYEVTLRVRPIQGFSVQ
                     TAKVSFKDFGKLGPKLVGATAGVKLYLLPFRDRIYLELRRPAAEGDPGRKLAWRLKDW
                     AVYSALPEAARSLGMALPIRQLRYPLIDSLSEVAQSLVNNALVRSGSNSVEQSGRYRM
                     LGSKSRFTYTTWAFPAAEFSSTVLAYKLFCKEYYARTGFRCDMPTVGFRLNHDRSALL
                     SPSFDSPMFTISPLSTQDDGWEDFVLDFADFAAKHHGMPFFNQTRNAAPEVVAQRFGS
                     RLTFFNKVRRELDPHDRLVNQFFQSYLPPA"
     gene            complement(1326..1511)
                     /locus_tag="VIQ99_05935"
     CDS             complement(1326..1511)
                     /locus_tag="VIQ99_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEY9182719.1"
                     /translation="MAEKKTLTFAITHMSVAFAVGWALTGSAAIGGALALVEPLVNTV
                     AYFLHEKLWERHRRAAA"
     gene            complement(1595..3307)
                     /locus_tag="VIQ99_05940"
     CDS             complement(1595..3307)
                     /locus_tag="VIQ99_05940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional sulfate
                     adenylyltransferase/adenylylsulfate kinase"
                     /protein_id="HEY9182720.1"
                     /translation="MGALKNPHGGVLKNLYLDEAGAAQEKARARDLPSWDMSMRQLCD
                     IEMLLNGAFSPLEGFLGEADYKRVVSDMRLTSGVLWPMPITLDVTPAFADKLKLGDTI
                     ALRDGEGVLIATMEISSIYRPDREVEAKSVFGTVDQKHPGVSFLLSRSNEVYLGGKLR
                     GVEEPGHYDFKHLRDSPKELRERFHKLGWRRIVAFQTRNPMHRAHQELTFRAAKDVEA
                     NLLIHPVVGMTKPGDVDHFTRVRCYEHLLKAYPEQTTALSLLPLAMRMGGPREAVWHA
                     IIRKNYGCTHFIVGRDHAGPGNDSNGKPFYGPYDAQELMKKHEKELDIVMVPFKNMVY
                     VEDKAQYFPEDEVEKGTRTLDISGTELRRRLQEGADIPAWFSFPDVVAELRRTHPPRH
                     KQGFTVFFTGLSGSGKSTVANALMVKLMEMGGRPVTLLDGDLVRKHLSSELGFSKEHR
                     DLNIQRIGYVASEITKNGGIAICAPIAPYAATRKRVREMIEPLGGFIEIHVATPIEVC
                     EQRDRKGLYAKARAGILKGFTGIDDPYEVPENPEMRLDTTESTPDMSAHRIIVKLEAL
                     GFIR"
     gene            complement(3388..4362)
                     /locus_tag="VIQ99_05945"
     CDS             complement(3388..4362)
                     /locus_tag="VIQ99_05945"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:NF012901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEY9182721.1"
                     /translation="MANKKILYIFPGQGSQYRGMGSDLVAEFPVAKDLYARASDVVGY
                     DMTELSFGDPREELSKTRFTQPALLTHEIACLEAFRTLVGDRVRPELGAGHSLGEYSA
                     LVMAGALTFENALKLVSRRGQLMSELGRGGMVATTLDLAAAAAIADKYFCGIAAHNML
                     DQVVIAGESADLDKLTVEMEAAKKRVVRLNTEGAFHTYLMVAAAQQFRQVLDQTELAG
                     VATDVLSNYTGQLHTSSPEAIRSRLFFQLFNPVRWVDCLNTAIDRGVDVVVEFGGGIG
                     KGEGPDGKRPNLESIIKKSLKTREHPAQYLPAINAATIRATAEQLLAG"
BASE COUNT          781 a         1505 c         1436 g          839 t
ORIGIN      
        1 ttcagcaagt cctcatggac ccgcgccgat atccggggcc ggtgcgtccg atcggctcgg
       61 ggagctcgac gacgcgctgc gtgacagcga acggcggcac ccagatcgat ctgtctacga
      121 tgaaccgcgt cctcaagatc gaccgcgaca ccgtcaccgt ccagcccgga atctcgttgc
      181 cggagctggc cgaaatcctc ggcgaggaag gcctcgagct cgtcggcggg ttcgatctcg
      241 cgaaccgcac ggtcggcggt gccgtcagcg cggcggggct cgaagcatcc atggccggcg
      301 acgtcggcca gttcgcgtcc cacgtcgtgc agctcaaggt attgagcccg aacggcaaga
      361 aattcgtcgt gaacgagaag acaaagagcc tgctcgcgct gatgcggctg tcttacggcc
      421 tgctcggcgt cgtgtacgag gtgacgctgc gcgtgcggcc gatccagggg ttctcggtgc
      481 agacggccaa ggtgtcgttc aaggacttcg gcaagctcgg ccccaagctc gtcggcgcga
      541 cggcgggcgt gaagctgtac ctgctgccat tccgcgaccg catctatctc gagctgcgcc
      601 ggccggcggc cgaaggcgac ccgggccgca agctcgcgtg gcggctcaag gactgggccg
      661 tttactcggc gctgccggaa gccgcgcgct cgctcggcat ggcgttgccg atccgccagc
      721 ttcgctaccc gctgatcgac agcctgagcg aggtcgctca atcgctcgtg aacaacgcct
      781 tggtgcgcag cggcagcaac tctgtcgagc aaagcggtcg ttaccgcatg ctcggcagca
      841 agagccgctt cacgtacacg acgtgggcct ttcccgcggc cgagttctcg agcaccgtcc
      901 tcgcatacaa gctgttctgc aaggagtact acgcgcgaac cggcttccgc tgcgacatgc
      961 cgaccgtcgg cttccgcttg aatcacgacc gcagcgcgct gctgtcaccg tcgttcgata
     1021 gcccgatgtt cacgatcagc ccgctctcga cgcaagacga cggctgggag gacttcgtgc
     1081 tcgatttcgc ggactttgcc gcgaagcatc acggcatgcc gttcttcaat cagacacgca
     1141 acgcggcgcc cgaagtcgtg gcccagcgct tcggctcgcg cctgacgttc ttcaacaagg
     1201 tgcgccgcga gctcgatccg cacgatcggc tcgtgaatca attcttccag tcgtatcttc
     1261 cgccggcctg attccacgct tgcgcgaggc tgaggcgcgc tcgggccagc gcagaagtca
     1321 ctcggctacg ccgccgcgcg acgatgccgc tcccacagct tttcgtgcag gaagtaggcg
     1381 accgtgttca cgagcggctc gacgagcgcc agcgcaccgc cgatcgcggc actgccggtt
     1441 agcgcccagc cgaccgcgaa cgcgacggac atgtgcgtga tcgcaaacgt gagcgttttc
     1501 ttctcagcca tggccgccac gatatgcgac ccattctcat ttggccaatc gatcgtttct
     1561 atcgccgcgt tcggtttcgc ctatggttgc ggcgtcaacg aatgaacccg agcgcctcga
     1621 gcttcacgat gatgcgatgc gccgacatgt ccggcgtcga ctcggtggtg tcgagccgca
     1681 tctcgggatt ctcgggcacc tcgtacggat cgtcgatgcc ggtgaagcct ttcaagatgc
     1741 cggcgcgagc cttcgcgtag agacctttac gatcgcgctg ctcgcagacc tcgatcggcg
     1801 tcgcaacgtg gatctcgatg aagccgccga gcggctcgat catctcgcgc acgcgcttgc
     1861 gcgtcgccgc atacggcgcg atcggcgcgc agatcgcgat gccgccgttc ttcgtgatct
     1921 cgctcgcgac atagccgatg cgctggatgt tcaggtcgcg gtgctccttc gagaagccga
     1981 gctcgctcga taggtgcttg cgcacgagat cgccgtcgag cagcgtgacg ggccggccgc
     2041 ccatctccat gagcttgacc atcagcgcgt tcgcgacggt ggacttgccg gagcccgaca
     2101 agcccgtgaa gaacaccgtg aaaccttgct tgtggcgcgg cggatgcgtg cgacgcagct
     2161 ccgcgacgac atccgggaac gagaaccagg ccgggatgtc ggcgccctcc tggagccttc
     2221 ggcgtagctc cgtgcccgag atgtcgagcg tgcgagtgcc cttctcgact tcgtcctcgg
     2281 ggaaatactg cgccttgtct tccacgtaca ccatgttctt gaaaggcacc atgacgatgt
     2341 cgagctcttt ctcgtgcttc ttcatgagct cttgcgcgtc gtacgggcca tagaacggct
     2401 tgccattgct gtcgttgccg ggacccgcgt gatcgcggcc gacgatgaag tgcgtgcagc
     2461 cgtagttctt gcggatgatc gcgtgccaga cggcttcgcg cgggccgccc atgcgcatcg
     2521 cgagcggcaa caggctgagc gcggtcgttt gctcgggata cgccttgagc aggtgctcgt
     2581 agcagcgcac gcgcgtgaag tggtcgacgt ccccgggctt cgtcatgccg acgacggggt
     2641 ggatcagcag attcgcttcg acgtccttcg cggcgcggaa cgtgagctcc tggtgcgcgc
     2701 ggtgcatcgg attccgggtc tggaacgcga cgatccggcg ccagccgagc ttgtggaacc
     2761 gctcacgcag ctctttcgga gagtctcgta agtgcttgaa atcgtaatgc ccaggctcct
     2821 cgactccgcg cagcttgccg ccgagataga cctcgttgct acggctcagc aggaagctga
     2881 cgccggggtg cttctgatcc acggtaccga acaccgactt ggcttcgacc tcacggtccg
     2941 ggcggtagat gctcgaaatc tccatggtcg cgatcagcac tccctcgccg tcgcgaagcg
     3001 cgatcgtgtc gccgagcttg agcttgtccg cgaacgcggg cgtcacgtcg agcgtgatcg
     3061 gcatcggcca cagcacgccg ctcgttaaac gcatgtcgga cacgacgcgc ttgtagtcgg
     3121 cctcgcccag gaaaccttcg agcggcgaga acgcgccgtt cagcagcatc tcgatgtcgc
     3181 agagctggcg catgctcatg tcccacgacg gcagatcgcg ggcgcgcgcc ttctcttgcg
     3241 cggctcccgc ctcgtcgagg tacaaattct tcaatacccc accgtgggga ttcttcaacg
     3301 cgcccatggg ctctgctcct taaacaaaaa aatcgctgca acaccgcgcc tcggacgtcc
     3361 acgccgggcg ggatggggtt tggtggtcta gccggccaac agctgctcgg ccgtcgcgcg
     3421 gatggtcgcc gcattaatcg cgggcaggta ttgtgctgga tgctcgcggg ttttcaagga
     3481 tttcttgatg atcgactcga gattcggccg cttgccgtcc ggcccttcgc ccttgccgat
     3541 gccgccgccg aactcgacga cgacatcgac accgcgatcg atcgccgtgt tcaggcaatc
     3601 cacccacctg accggattga acagctggaa gaacaaacgc gagcgaatcg cttcgggcga
     3661 gctcgtatgc agctggccgg tgtagttcga gagcacgtcg gtcgcgacgc cggcgagctc
     3721 ggtctggtcg agcacctgcc ggaattgctg cgcagccgcg accatcaagt acgtgtggaa
     3781 tgcgccctcg gtgttcagcc gcacgacacg cttcttcgcg gcctccatct cgaccgtgag
     3841 cttgtcgaga tcggccgact cgcccgcgat cacgacctga tcgagcatgt tgtgagctgc
     3901 gattccgcag aagtacttgt ccgcgatcgc agcggccgcg gccagatcca gcgtcgtcgc
     3961 gaccatgccg cctcggccga gctcgctcat gagctgcccg cggcggctca cgagcttcaa
     4021 tgcgttctcg aacgtcagcg cgcctgccat cacgagcgcc gagtactcgc cgaggctgtg
     4081 acccgcgccg agctcgggac gcacacggtc gccgacgagg gttcgaaagg cttcgaggca
     4141 ggcgatctcg tgagtcagca acgcgggctg cgtgaaccgc gtcttgctca gctcctcgcg
     4201 cggatcgccg aagctgagct cggtcatgtc gtacccgacg acgtcgctgg cacgcgcgta
     4261 caaatccttg gcgaccggaa actcggcgac gagatccgag cccatgccgc gatactgaga
     4321 cccctgcccg ggaaagatgt acagaatctt cttattggcc acgcttcagt ctagccggac
     4381 gcctctcaga aggcgcgtac gatgcccgaa cggtgccgcg aagccaatac gaacctggaa
     4441 tcccgttatg ccgccgcgat aggaagcgtg gctcaagaaa cggcggctgc ggcgcgccgg
     4501 ccccgctcgg gatcgacgct ctggagcacg atgagcccca gcacgaagaa aatgcccgtg
     4561 a
//
LOCUS       DATCUD010000404         1543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46486, whole genome shotgun sequence.
ACCESSION   DATCUD010000404 DATCUD010000000
VERSION     DATCUD010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46486"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..1086)
                     /locus_tag="VIQ99_05950"
     CDS             complement(82..1086)
                     /locus_tag="VIQ99_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182722.1"
                     /translation="MGAALELPVAADLFETEEPLALELAAPFPTVFRQREAVDREWQD
                     ATLTYGQGRGAEAGVTVPLRVRVRGRSRAAECHFPPLMLNFRKPDVVGTVFDGQDRLK
                     LVTHCKTTDSYDEYVRLEYLIYRAQALVTQYSLRARPVEAHYVDNGRARDMGTRPAIL
                     LEDEERFGERHGMAIFEETRVDRSRYDAEALAVFDVFQYLIGNTDWSVIDGPGEEQCC
                     HNVTPYVRADGKMIPVAYDFDSAGLVNAPHAVPNERLPIRNVRQRLYRGQCRTPEELA
                     PIFARFEQQRSAILALFTPEQGLEEDAAESAREYIEEFYATLADDKQRERAFFNACDD
                     "
     gene            complement(1260..>1543)
                     /locus_tag="VIQ99_05955"
     CDS             complement(1260..>1543)
                     /locus_tag="VIQ99_05955"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY9182723.1"
                     /translation="QGGACLVGRDDDCVIKIEHRLVSRRHASVECVAGKFFLQDHSTN
                     GTYVAERHGSAVLVHREMLQLKDAGLISLGIEPQFNVEHSISFLFDGSG"
BASE COUNT          272 a          519 c          491 g          261 t
ORIGIN      
        1 tggcgctcag gggtcgcaaa cctctaggat ctagccgacc gagtatcaca caaggctcag
       61 ccgctcacta cgacggtgcc ctcaatcgtc gcaggcgttg aagaaagctc tctcccgctg
      121 cttgtcgtcg gcgagcgtgg catagaactc ctcgatgtac tctcgcgcgc tctccgcagc
      181 gtcctcttcg agcccctgct cgggcgtgaa cagcgcgaga atcgccgacc gctgctgctc
      241 gaaccgcgcg aagatcggcg ccaactcttc gggcgtacgg cactgcccgc gatacaatcg
      301 ttggcgaacg ttcctgatcg gcagccgctc gttcggcacc gcgtgcggcg cgttgacgag
      361 gccggccgag tcgaagtcgt acgcgacggg gatcatcttg ccgtcggcac gcacgtacgg
      421 cgtgacgttg tgacagcact gctcctctcc gggaccgtcg atcaccgacc aatccgtgtt
      481 accgatcaga tactgaaaaa cgtcgaaaac ggcgagcgcc tcggcgtcgt agcgcgagcg
      541 gtcgacgcga gtctcctcga agatcgccat gccgtgccgc tcgccgaacc gctcttcgtc
      601 ctcgagaaga atcgcgggcc gcgtgcccat gtcgcgagcg cgaccgttgt cgacgtagtg
      661 cgcctcgacc ggccgcgcac gcagactgta ctgcgtgacg agcgcttggg cgcgatagat
      721 caaatactcg aggcgcacgt actcgtcgta gctgtccgtg gtcttgcagt gcgtgacgag
      781 cttcaaacga tcctgaccat cgaacaccgt gccgacgacg tccggcttgc ggaagttcag
      841 catcagaggc gggaaatggc attcggccgc gcgcgaccgg ccgcgaactc gtacgcgtag
      901 cggcaccgtc acgccggctt ctgcaccgcg tccctggccg tacgtgagcg tcgcatcctg
      961 ccactcccta tccacggcct cgcgctggcg aaacacggtc gggaacggcg ccgcgagctc
     1021 gagcgcgagc ggctcttcgg tttcgaacag gtcggcggcg accggaagct cgagggcggc
     1081 gcccatcgca agcgctgtga ggacggcccg cgagccgcag tgtggagtcc tggttcgcga
     1141 aacgctgcgg cgcatcggtc gacctcggct cgagaagagc atcgcgtcgc cgatcataag
     1201 gaggtcgagc gcgtcccggc aacccgcgct cgtcgcccca ttcccgtaga gtgccgagcc
     1261 tagccgctgc cgtcgaacag gaagctgatc gagtgctcca cgttgaattg cggctcgatc
     1321 ccgagcgaga tcagcccggc gtccttgagc tggagcatct cgcgatgcac gagcaccgcg
     1381 ctgccgtggc gctccgcgac gtaggtaccg ttggtgctgt ggtcctgcag gaagaactta
     1441 ccggcaacgc actcgaccga tgcgtggcgc cgggaaacga gtcgatgctc gatcttgatc
     1501 acgcagtcat cgtcgcggcc gaccaaacaa gcgccgccct gcg
//
LOCUS       DATCUD010000405         1534 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96380, whole genome shotgun sequence.
ACCESSION   DATCUD010000405 DATCUD010000000
VERSION     DATCUD010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96380"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..868
                     /locus_tag="VIQ99_05960"
     CDS             <1..868
                     /locus_tag="VIQ99_05960"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9182724.1"
                     /translation="IIRALASIAVCAALWGCGSSEEPVAPVATAPSAPPAEQPHQVPA
                     PGAAAPEVPLLEQTLAYGEAARSNLVGYLAMPQDAAEPLPGIIVIHEWWGLNDDIKAM
                     TRRLAAKGYVVLAVDLYGGKTAKTPDEANSLMSDLYGDPAAARRNLQQAYDYLEKYAL
                     APRIASIGWDLGGGWSLETALQYPGALDAAVMYYGQIITERDRLAPLNVPLLGFFGAE
                     DRTIPVREVQEFRATLGDLGKVAEVLIMPRAGHGFAMGESYNEKAANEAWDTTLAFLE
                     RNLKLATPIRAQ"
     gene            complement(1082..1351)
                     /locus_tag="VIQ99_05965"
     CDS             complement(1082..1351)
                     /locus_tag="VIQ99_05965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182725.1"
                     /translation="MVARKLLTASAVGLSVSLLAQHAAGAEPRAVQKAPAAMELVVDS
                     QLFRNEIEGYVRELNRQMRATLNEDLRRELAPKVVLAVNELRTRS"
BASE COUNT          278 a          499 c          469 g          288 t
ORIGIN      
        1 gatcatccga gcattggctt cgatcgccgt ctgcgcggcg ctttggggtt gcgggtcatc
       61 cgaagagccc gtggcgccgg tcgccactgc accttcggcg ccgcccgccg agcaaccgca
      121 ccaggtgccg gcgcccgggg cggccgctcc ggaagtgccg ctcctcgagc aaacgctggc
      181 ctatggcgaa gcggcgcgca gcaatctggt cgggtatctc gcgatgccgc aggatgccgc
      241 cgagccgctg cccgggatca tcgtgattca cgagtggtgg ggcttgaacg acgacatcaa
      301 agcgatgacg cggcgcttgg ccgccaaagg ctatgtcgtc ctcgccgtcg atctctacgg
      361 cggcaagacg gcgaaaacgc ccgacgaggc gaattcgttg atgagcgact tgtacggcga
      421 tcccgccgcc gcgcggcgca acctccagca ggcctatgac tacctcgaga agtacgcgct
      481 ggcgccgcgc atcgcgagta tcggctggga cctcggcggc ggctggtcgc tggaaacggc
      541 gctgcagtac cccggcgccc tcgacgccgc cgtcatgtat tacgggcaga tcatcacgga
      601 gcgcgatcgg ctagcgccgc tgaacgtccc gctgctcggc tttttcggcg cggaggaccg
      661 cactattccc gtgcgcgaag tgcaggaatt tcgcgcgacg ttgggcgatc tcggcaaggt
      721 cgccgaggtg ctgatcatgc cgcgcgccgg tcacggcttc gcgatgggcg agagctataa
      781 cgagaaggct gcgaacgagg cgtgggacac gacgctggcg tttctcgagc gaaacttgaa
      841 gctcgctacg ccgatacgcg cgcagtagtt aggaggtcgc gccgaaaaat gctcctgcat
      901 tttcggcatg ccggccatcc atggccgtca aaaaaatgga gccgggctgc ggaacatccg
      961 tatccttcat tgcgaagtat cctgttcgct gccggaaacc cggccccctc aaaacggccg
     1021 tccgactcgg ccaacgggcc accacggggg gagaagtggt gggccgtttg ttcgctaccg
     1081 tttagctcct agtgcgaagc tcattcacgg cgagcacgac cttcggtgcg agctcgcggc
     1141 gcaaatcctc gttcagggtc gcgcgcatct gccgattcag ctcacgcacg taaccctcga
     1201 tctcgttacg aaacagctgc gagtcgacga cgagctccat ggccgccggc gctttctgca
     1261 ccgccctcgg ttccgcgcct gccgcatgct gtgcgagcag gctcacggac agtccaacgg
     1321 cactcgccgt cagtagcttg cgcgcaacca tactctccaa tcctttaccg aattcctttc
     1381 ggtcgttaac gatctcgtcc gagatcacgt gctcctattg cacgccgcgt gccaacgcca
     1441 atcatctttg aattcaaaga cttgacgtgt cttcgtattc acgacatttc gttactcacg
     1501 gtttttcgtt gcgacaatcc acggaaaacc gtaa
//
LOCUS       DATCUD010000406         2209 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53655, whole genome shotgun sequence.
ACCESSION   DATCUD010000406 DATCUD010000000
VERSION     DATCUD010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2209
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53655"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..352
                     /locus_tag="VIQ99_05970"
     CDS             <1..352
                     /locus_tag="VIQ99_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011388358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9182726.1"
                     /translation="REAALGVGASRMQMVLHHVLPLAMPGMLTGTIIGMARALGESAP
                     LLMIGMVAFIVDIPDSPLSPATALPVQVYLWADSPERAFVERTSAAIVVLLLFLLVMN
                     AAAILLRKRFERRY"
     gene            414..1277
                     /gene="pstB"
                     /locus_tag="VIQ99_05975"
     CDS             414..1277
                     /gene="pstB"
                     /locus_tag="VIQ99_05975"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007678809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HEY9182727.1"
                     /translation="MTEAATPAAQAAPVQAVPAKPAAEEGYRTVGDFTSTKAVMQARQ
                     VDVFYGDNHAIQKVNLDIGRNEVIALIGPSGCGKSTFIRVLNRMNDTIESARVTGEIT
                     LDGENIYGRHMDVVMLRARVGMVFQKPNPFPKSVYDNVAYGPRIHGLARDRGELDEIV
                     QLSLERAGLWTEVKDRLEEPGTGLSGGQQQRLCIARTIAVNPDVILMDEPCSALDPIA
                     TARIEDLIDELKQNYAIAIVTHSMQQAARVSQRTAYFHLGKLIEVGETDDIFTNPRHK
                     LTEDYITGRFG"
     gene            complement(1287..1889)
                     /locus_tag="VIQ99_05980"
     CDS             complement(1287..1889)
                     /locus_tag="VIQ99_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008228926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY9182728.1"
                     /translation="MNESTQPRAIAIWDPFVRLAHWTVVAAFLTAYITGGEPRGIHTA
                     AGYLLAAYVGLRVVWGFVGPERARFASFVRSPISAIGYLVDLLRGRATRHLGHSPAGG
                     LMIVLLLLALSATTSAGMMLYALHDGGGPLAGVVASETPAPPAGDREDPRVEFWEESH
                     ELLANLTLLLVLLHIGGVVVASIAHRENLVKAMITGRKRP"
BASE COUNT          397 a          700 c          745 g          367 t
ORIGIN      
        1 tcgcgaggcc gcgctcggcg tcggcgcctc gaggatgcag atggtgctgc accacgtgtt
       61 gccgctcgcg atgccgggga tgttgacggg cacgatcatc ggcatggcgc gcgcgctcgg
      121 cgaatcggcg ccgctcttga tgatcggcat ggtcgctttc atcgtcgaca ttccggattc
      181 gccgttgagc ccggccaccg cgttgccggt gcaggtatat ctttgggccg acagccccga
      241 gcgtgcgttc gtcgagcgca cgtcggctgc gatcgtggtg ctgctgctgt tcctgctcgt
      301 catgaacgca gctgcgatcc tgttgcgaaa gcgtttcgaa cgccgctact agcagcgccg
      361 cgaaacggag atgggttagg atgagcgcag ccctagaaaa aacgagtagc tccgtgacag
      421 aggccgccac tcccgcggca caggcagcgc ctgtgcaggc ggtgcccgcg aaacccgcag
      481 ccgaagaggg ctaccgaacc gtcggtgatt tcacgtccac gaaggccgtc atgcaggcgc
      541 ggcaggtcga tgtgttctac ggcgacaacc atgccattca gaaagtgaac ctcgacatcg
      601 gccgcaacga ggtcatcgcg ctgatcggtc cgtcgggttg cggcaagtcc acgttcatcc
      661 gcgtgttgaa ccgcatgaac gacacgatcg agtccgcgcg cgtgacgggc gagatcacgc
      721 tcgacggaga gaacatttac ggacggcaca tggacgtcgt gatgctacgg gcgcgcgtcg
      781 gcatggtgtt ccagaagccg aatccgttcc cgaagtccgt ctatgacaac gtcgcttacg
      841 gcccgcgaat tcacggcttg gcgcgtgatc gcggtgagct cgatgagatc gtgcagttga
      901 gcctcgagcg ggccgggctc tggaccgagg tcaaggatcg gctcgaggag ccgggcacgg
      961 gactatcggg cggccagcag caacgcctct gcatcgcgcg cacgattgcc gtgaatcccg
     1021 atgtgatcct catggacgag ccgtgctcgg cgctcgatcc gatcgcgacc gcgcgcatcg
     1081 aggatctgat cgacgagctc aagcagaact acgcgatcgc gatcgtgacg cattcgatgc
     1141 agcaggccgc gcgcgtttcg cagcgcacgg cctactttca cttgggcaag ctgatcgaag
     1201 tcggcgagac cgacgatatc ttcacgaacc cgcgccacaa gctcacggaa gactacatca
     1261 ccggccgctt cggctgatcg ccggcgttac gggcgcttac gccccgtgat catggctttc
     1321 acgagatttt cgcgatgcgc gatgctcgcg acgacgactc cgccgatgtg cagcaagacg
     1381 agcagcaacg tgaggttcgc gagcagctcg tggctttcct cccagaactc gacgcgaggg
     1441 tcctctcgat cgccggccgg cggcgccggc gtctcgctcg cgacgacacc cgcgagcggg
     1501 cctccaccgt cgtgcagtgc gtagagcatc atgccggcgc tcgtcgttgc cgagagcgcg
     1561 agcaatagga gaacgatcat gagcccgccg gccgggctgt ggccgagatg ccgcgtggcg
     1621 cggccgcgca gcaggtccac gagatagccg atcgcactga tcggcgagcg cacgaagctg
     1681 gcaaagcgcg cgcgctcggg tccgacgaag ccccagacca cgcggagacc gacgtacgcg
     1741 gcaaggagat agccggcggc ggtatggatt ccgcgcggct cgccgccggt gatgtaggcc
     1801 gtgagaaatg ctgcaacgac tgtccagtgc gcgagccgca cgaacggatc ccagatggcg
     1861 atagcgcgag gctgagtaga ctcgttcatg tcggcaatcc ctaatggcgt gagatcggag
     1921 cttaatcggc cgttggtgcg cgggttactg cgggatgtac tatcccgcta agcgactgtc
     1981 gccgcccacg ccgccgcgcg tccgaggcgg cgatacgtgc tatccgaact gcggctcgtg
     2041 cgggcttcgc gcgatgattc accaccggag gacgcgacgg tgacgatcga aattccggct
     2101 tcgatacgcc gcgagcacga ggcgattcat gcggcgctcg tcgccgcaac gcgcgcgccc
     2161 gggcgcgtgg gcgcggcggc gagagcgctc gccggcgtgc ttcatccgc
//
LOCUS       DATCUD010000407         1960 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96404, whole genome shotgun sequence.
ACCESSION   DATCUD010000407 DATCUD010000000
VERSION     DATCUD010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96404"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="VIQ99_05985"
     CDS             <1..693
                     /locus_tag="VIQ99_05985"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9182729.1"
                     /translation="ARQLPSVTHTSSPAYALAKTRLVALNAPTPEAALAAFRGKADST
                     APEDRYGLALASMRMSLHDQAEGLFRGLIADYPNVMAFRVGQAEAMAASGQTETALSI
                     YAEAIRLFPRNVPLTISYAEVLIAAGMPAEAHELLLDLLNNVPPTAPQLRLIARAANA
                     EGDVANAYFYMSYYYGAIGNLPLAIGQVRMALETPNVHDVDRARFRARLDELIEYLPE
                     EQRDLAETRGPQ"
     gene            789..1244
                     /locus_tag="VIQ99_05990"
     CDS             789..1244
                     /locus_tag="VIQ99_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008209382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly regulator"
                     /protein_id="HEY9182730.1"
                     /translation="MLRMSKLTDYGTMVLAQLAASDRGLTTASQLAEVTHLALPTVSK
                     LLKALVHAGLVLSTRGVQGGYMLARPADSISAAEILDALEGPVALTECSSSSGGCDLE
                     SYCRVGTAWQRINRSIRTALEGVSLADLQRRRSPLPNLREALRTAAVAR"
     gene            1258..>1960
                     /locus_tag="VIQ99_05995"
     CDS             1258..>1960
                     /locus_tag="VIQ99_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006747788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEY9182731.1"
                     /translation="MATESEQLSDLVKRKYRHGFVTDIEQETVPPGLNEDVIRAISAR
                     KGEPAFMTEWRLKAYRHWLTMTEPTWAHVRYAPIDYQAISYYAAPKSAADAPKSLEDV
                     DPKLLETYDKLGIPLHERARLAGIAVDAVFDSVSVATTFKDKLAAAGVIFCSFSEAVK
                     NHPDLVQRYVGTVVPYRDNFFATLNSAVFTDGSFVYVPKGVRCPMELSTYFRINAAKT
                     GQFERTLIVADEGSHV"
BASE COUNT          375 a          638 c          614 g          333 t
ORIGIN      
        1 gcccgccaat tgccgtcggt gacgcatacg agcagccccg cgtacgcgct ggcgaagacg
       61 aggctggttg cgctgaatgc accgactccg gaagctgcgc tcgctgcctt ccgcggcaag
      121 gcggacagca ccgcgccgga agaccgctac gggctcgcgc tcgcgtcgat gcgcatgtcc
      181 ctacacgatc aagcggaagg gttgttccgc gggctgatcg ccgactatcc gaacgtcatg
      241 gcgtttagag tcggccaagc cgaggcaatg gccgcgagcg gccagaccga aacagccttg
      301 agtatctatg ccgaagcgat ccgtctcttc ccccgaaacg tgccgctgac gatcagctac
      361 gctgaagttc tgattgccgc gggcatgccg gcagaggcgc acgagctgtt gctcgatttg
      421 ttgaacaacg tgccgccgac ggcgccgcag ctgcggctga tcgcacgggc agccaatgcc
      481 gaaggcgacg tcgcgaacgc ctatttctac atgtcgtact actacggcgc gatcggcaat
      541 ctgccgctcg cgatcggtca ggtgcgcatg gcgctcgaga caccgaacgt tcatgacgtg
      601 gatcgggctc gatttcgggc acggctcgac gagttgatcg aatacctgcc ggaagagcag
      661 cgagacctcg cggagaccag gggtccccaa tagtctggcc caggcgggcc gacggcccgc
      721 ccgttgcggc acatcaaaat tggactaaaa tagtccacta ttagccaaag ctaaggggag
      781 ccgcggccat gctgcgcatg agcaaattga ccgattacgg caccatggtg ctagcgcaac
      841 tcgcggccag cgatcggggc ttgaccactg cgagccagct ggccgaggtc acgcatctcg
      901 ccctaccgac ggtcagcaag ctcctgaagg ccttggtcca cgcgggcctg gtgctatcga
      961 cccggggggt tcaaggcggc tatatgctcg ctcgtcccgc cgattccatc agcgcggccg
     1021 aaatactcga cgcgctggaa gggccggtcg cgctcacgga atgcagctcc tcgagcggcg
     1081 gctgcgatct cgagtcctat tgccgcgtgg gcaccgcctg gcaacgcatc aatcgcagca
     1141 ttcgaacggc gctggaaggc gtgagcctcg ccgacctcca gcggcgtcgc tcgccgctgc
     1201 ccaatcttcg cgaggcgctc agaacggccg ccgtggcgcg ctgagctggg caagagcatg
     1261 gctaccgaat ccgaacagct ttccgacctg gtcaagcgca aataccggca tggattcgtc
     1321 acggacatcg agcaggagac ggtgccgccg ggcttgaacg aggacgtgat ccgcgcgatc
     1381 tcggcccgca aaggcgagcc tgctttcatg accgaatggc gcctcaaggc gtatcgccat
     1441 tggctcacga tgaccgagcc aacctgggct cacgttcgct acgcacctat cgactatcag
     1501 gcgatctcct actatgcggc gccgaagtcc gccgccgacg caccgaagag cctcgaggac
     1561 gtcgatccga agctgctcga gacatacgac aagctcggta tccctttgca cgagcgcgct
     1621 cgactggccg gtatcgccgt ggacgccgtc ttcgacagcg tctcggtcgc gacgacgttc
     1681 aaggacaagc ttgccgcggc cggcgtgatt ttctgctcgt tctcggaggc cgtgaagaat
     1741 cacccagacc tcgtgcagcg ctacgtcgga accgtcgtgc cctaccgcga caacttcttc
     1801 gcgacgctga actcggccgt gttcacggac ggctcgttcg tctacgtgcc gaagggcgtc
     1861 cgttgcccga tggagctgtc gacgtacttc cgcatcaacg cggcgaaaac cgggcagttc
     1921 gagcgaacgt tgatcgtcgc ggacgaaggc agccacgtga
//
LOCUS       DATCUD010000408         1557 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103244, whole genome shotgun sequence.
ACCESSION   DATCUD010000408 DATCUD010000000
VERSION     DATCUD010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103244"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..275)
                     /locus_tag="VIQ99_06000"
     CDS             complement(<1..275)
                     /locus_tag="VIQ99_06000"
                     /inference="COORDINATES: protein motif:HMM:NF013502.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HEY9182732.1"
                     /translation="MRAKSDTSGAKPAATTPGEEAATASGNAHRKPAVQQPRPSDVPL
                     VVIGASAGGLDAMKKFLTALPVDAGIGFVLVPHLDPRQKSLMVELLA"
     gene            510..>1557
                     /locus_tag="VIQ99_06005"
     CDS             510..>1557
                     /locus_tag="VIQ99_06005"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY9182733.1"
                     /translation="MATELPDDQIKAFLDASPDAMVIVDDGGRIVFVNIQTEAMFEYP
                     RAELVGQPVELLLPERFRDRHASHVCSYSVAPRRRPMGAGLELYARRKDGTEFPVEIS
                     LSPVTTARGRFVSSAIRNVTDRKAIERQLIEARQSAERANQAKSAFLAAASHDLRQPL
                     QTLSLLTSALGRVVPSDSKAATAVANQSEALRSMAELLNALLDISKLEAGVVKPDLTD
                     CSVRQIFTRLRHEFAALAEAKGLELIVEDCHDVVRTDPVLLGQIIQNLVGNAIRYTRQ
                     GWVRLRCIASLHAVQIEVADTGIGIPAEELELVFDEYYQTSRKIGEARQGIGLGLSIA
                     RRVAALLGCSLDVTS"
BASE COUNT          268 a          527 c          486 g          276 t
ORIGIN      
        1 ttcgccagca actcgaccat caggctcttc tgccgcggat ccaggtgggg aacgagaacg
       61 aagccgatgc ccgcatcgac cggcaaggcg gtgagaaatt tcttcatggc gtcgagcccg
      121 ccggccgacg cgccgatcac cacgagcgga acatcgctcg gacgcggttg ctggaccgcg
      181 ggctttcggt gcgcgttccc gcttgcggtc gccgcctcct cccctggcgt cgttgccgcg
      241 ggcttcgcgc ccgacgtgtc gcttttcgca cgcactctgg ccgcggacga cgcctccgcc
      301 gctcgcctac tcccgggtct tggtttcttg cccgaacgca tacctgctcg ttcctccgcg
      361 cggcggtcgc agcatggtgg attccaccac ccggccctcg ctgagggcac catcccgcgc
      421 gcatgagggc ggatgcatca ttagccctca tcgcaaaaaa aggaatagcg cggcagccga
      481 tctggtgcgg caccgccgcg ctaccggcaa tggcgacgga gctaccggac gaccagatca
      541 aagccttctt ggatgcttca cccgatgcca tggtgatcgt cgatgatggc ggcaggatcg
      601 tcttcgtgaa catccagacc gaagcgatgt tcgagtaccc gcgtgcagag ctcgtcggcc
      661 agcccgtcga gctcctgctg ccggaacggt ttcgcgatcg tcacgcgtcc cacgtgtgca
      721 gctattcggt cgcgccgcgc cggcggccga tgggcgcagg cctcgagctc tatgcgcggc
      781 gcaaggacgg caccgagttc cccgtcgaga tcagcttgag cccggtaacg acggcacgcg
      841 gacggttcgt gtcgagcgcg atccgcaacg tcaccgatcg aaaggcgatc gagcgccagc
      901 tcatcgaggc ccggcagagc gccgaacgtg cgaaccaagc gaagagcgcc tttcttgcgg
      961 cggcgagcca cgatctacgc cagccgctgc agactttgtc tctattgacg agcgctctcg
     1021 gccgcgtcgt gccttccgac tcgaaggcgg cgacggcggt cgccaatcag tcagaggcgc
     1081 tgcgctcgat ggcggagcta ctcaacgcat tgctggacat cagcaagctc gaagcaggcg
     1141 tggtcaaacc cgacttgacc gactgctccg tccggcaaat cttcactcgt ctccggcacg
     1201 agttcgcggc gctcgccgag gccaagggtc tggagctgat cgtcgaagat tgccacgacg
     1261 tcgtccgaac ggacccggtg ctgctcggcc aaatcatcca gaacctcgtc ggcaacgcga
     1321 tccgctacac acgacaggga tgggtccgcc tacgctgcat cgcgtctctg catgccgttc
     1381 aaatcgaagt cgccgacacg ggcatcggca ttcccgccga agagctggag ctcgttttcg
     1441 acgagtacta tcaaacgtcc cggaagatcg gcgaggcgcg tcagggcatt ggtctcggac
     1501 tttccattgc gcggcgcgtg gcggccttgc tcggttgttc gctcgacgtc acgtcga
//
LOCUS       DATCUD010000409         1643 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_68044, whole genome shotgun sequence.
ACCESSION   DATCUD010000409 DATCUD010000000
VERSION     DATCUD010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68044"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..385)
                     /locus_tag="VIQ99_06010"
     CDS             complement(158..385)
                     /locus_tag="VIQ99_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005214962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HEY9182734.1"
                     /translation="MKVVKLLASLTVCAPAALPLAGCAGVEAWDRDVLARPDMQIVSD
                     PIEAATDEHIYFSKEASSGGQGFGGGGCGCN"
     gene            complement(407..868)
                     /locus_tag="VIQ99_06015"
     CDS             complement(407..868)
                     /locus_tag="VIQ99_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011467662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9182735.1"
                     /translation="MRVLLSFAVVALLALSTPRVHAAPPQGLEPVQGKVIWVDFWASW
                     CVPCRRSFPWMNTMHRKYAAEGLEIIAVNLDKERALADGFLAEVPAEFALRFDPAGEL
                     AKEFKVQGMPSSYLLDSAGNVLATHIGFKTADAPEYERAIRDALAVPPATN"
     gene            complement(954..>1643)
                     /locus_tag="VIQ99_06020"
     CDS             complement(954..>1643)
                     /locus_tag="VIQ99_06020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020718665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182736.1"
                     /translation="QRYLGTKAAGLTIVTAERAGSRLVFDVAVASTTGHKLPTAYPSR
                     RAWLHVVVTDAAGAVLFESGALRTDGGIAGNDNDIDGTRFEPHYTELTSGDQVQIYES
                     IMTDQGGAVTTGLLRGVRYVKDNRLLPRGFDKTTAPEEVAVRGGAAADVDFVAGGDRV
                     RYRVDVGGAAGGPVHVVAELLYQSIGYRWAENLRGYDSDETRRFVRYYGENAAATGSL
                     LARVSTEIPAR"
BASE COUNT          271 a          591 c          517 g          264 t
ORIGIN      
        1 ccatccgact cgctgtagat caggagcgac gtgtcgatgt cccacggcat gagctcctgc
       61 gcggcgacca cgcccgggac ggtctgcccg agcaacgcac acgtcgccgc cgccagcggc
      121 gcaccaatct gccgaagcgt cggcgacttc ttgttgttca gttgcatccg cagccaccgc
      181 ccccgaagcc ctggccaccg ctcgaagctt ccttgctgaa gtagatgtgc tcgtcggtgg
      241 ccgcctcgat cggatcgctg acgatctgca tgtcggggcg cgccagcacg tcgcgatccc
      301 acgcctcgac gccggcgcaa cccgcgagcg gcaacgcggc cggcgcacac acggtgagac
      361 tggcgagcaa cttcactacc ttcacggtcc gttctccttg caagtactag ttcgtagcgg
      421 gcggtaccgc gagcgcgtct cgaatcgcgc gctcgtactc cggcgcatcc gccgtcttga
      481 agccgatgtg ggtcgcgagc acgttgccgg cggagtcgag cagatacgag ctcggcatcc
      541 cctgcacttt gaattccttc gcgagctcgc cggcgggatc gaagcgcagc gcgaactcgg
      601 cgggcacctc tgcgaggaag ccgtccgcga gcgcgcgttc cttgtcgagg ttcacggcga
      661 tgatctcgag gccctccgcg gcgtacttgc ggtgcatcgt gttcatccaa gggaacgagc
      721 ggcggcacgg cacgcaccac gacgcccaga aatcgaccca gatgactttg ccttgtacgg
      781 gctcgagtcc ctgtggcggt gccgcgtgaa ctcttggggt gctcagcgcg agcagcgcca
      841 cgacagcgaa cgacagcaga acacgcacag cccctcctcc tacccgcgcc atcgcaggca
      901 cccgttggac ggggcgctgc gacaaaatcg gtcgcaacac gccccggcag tattcaacgc
      961 gccgggatct cggtcgaaac ccgcgcgagt aggctccccg tggcggccgc gttctcgccg
     1021 taatagcgca cgaaacgccg agtctcgtcc gagtcgtaac cgcgtaggtt ctcggcccac
     1081 cgatagccga tcgactggta cagcagctcg gctacgacgt gcaccgggcc accggcggcg
     1141 ccaccgacgt ccactcggta gcgcacgcgg tcgccgccgg ccacgaagtc gacatccgcc
     1201 gccgcgcccc cgcgcacggc cacctcttcc ggagccgtcg ttttgtcgaa gcctcgtggc
     1261 aacagccggt tgtccttgac gtaacgcact ccgcgcaaca gccccgtggt cacggcgccg
     1321 ccctggtccg tcatgatcga ctcgtagatt tggacctggt cgccgctcgt gagctcggtg
     1381 tagtgcggct cgaaacgcgt gccgtcgatg tcgttgtcgt tgccggcgat cccgccatcg
     1441 gtgcgcagcg cgccggactc gaacaagacg gcgccggcag catcggtcac gacgacgtgc
     1501 agccacgcgc gccgcgaggg atacgccgtc ggcagcttgt gtcccgtcgt gctcgcgacg
     1561 gccacatcga aaacgagccg cgagcccgcg cgctccgcag tcacgatcgt caagccggcg
     1621 gccttcgtgc cgagataccg ttg
//
LOCUS       DATCUD010000410         8431 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60508, whole genome shotgun sequence.
ACCESSION   DATCUD010000410 DATCUD010000000
VERSION     DATCUD010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 8431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8431
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60508"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VIQ99_06025"
     CDS             <1..237
                     /locus_tag="VIQ99_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182737.1"
                     /translation="AVGGQGITLADDALTRDSVLTLERRTPAGTQGQAATGRTLEEPQ
                     QFRLMLRGNRCWLVRDTDGREWELRETSCVPAQR"
     gene            complement(241..2973)
                     /locus_tag="VIQ99_06030"
     CDS             complement(241..2973)
                     /locus_tag="VIQ99_06030"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY9182738.1"
                     /translation="MRAIKILLAVVGVFAALVLIAVAVVAVTFDPNDYKGVATDTFRA
                     RTGRTLSIEQDLRLNYFPWLAVETGGVTVGSAQSFGGDTQLFLSATRVAARVKLVPLL
                     SRRIEVGTVEIEGVTLNLARDAELRGNWQDLLDAMSSGADAAAPAEPSAAPAQTFAIE
                     GVRIRDGSVYWRENTDELRYSATGLSLTTGGIGRGEPLAFETALQFNDELSAAAIALA
                     ASGVVTIAEDGSVTARDAKVAATLSAANGAPARAIEATAARIAFARATQTLAVEGLST
                     EMAGVSATWQLTGTELIDNPTVEGSVAVASAELARVFEQLQLSPPQGVDPGELGSLTG
                     SAAFRFQAEPRVIDVTNVRAEALGIRLSGEGSLTGENELAGRIAIAEFTPNAAVQALL
                     RAAVPPTVDVSALGSLALDTRFDTNLGTGRAALRDLTARVLGATINGNLEGIPGERGN
                     VFRGSIATSRFPADAFAKTFASMLPPNLAASELGMIELSTTFTFDAGADTLTVAPLRA
                     EIFGLRASGEVTGRDVTRAATWTGSAAVAEFSPQDLLRRFGLPPQQTSDPDAFTRATL
                     STRFTVTNTSADLRDIVLKLDDTTIVGTFALADFERPSYRFALDVDRVNADRYLPPKR
                     RDAAAGEATAGDIELPQNNTMNLDGTMRVGSLELAGMQFQSVDGHIAIADGDMKLQNL
                     HAQLYGGTFNGNFTVHAAGDRPGLALDGRAANLDLAPLITALTAEDANFSGTGNFDLN
                     LAGSGRTVIANVETAAGDVSFSMTNGAIKGFNLGHALCRAYNFTQRAPAPPEQPAETP
                     YIEIKGSAAVTGGTAQSNDLLARTSFMDISGRGSLQLVEQHLDYDLDATLTNAIAIPG
                     CNTLDQFVGGSLPFEIEGTVTEPSITPDFSRLVRQQLQEEIEDRIRDRLRDLLR"
     gene            complement(2982..4292)
                     /locus_tag="VIQ99_06035"
     CDS             complement(2982..4292)
                     /locus_tag="VIQ99_06035"
                     /inference="COORDINATES: protein motif:HMM:NF013895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY9182739.1"
                     /translation="MDEATRNLALDRVNRQFLLEHPAQAADVIDGFGRAAATEVLADH
                     QADTLANVWRHLSPARIDEIVPALPERLLKQALHSLDPGVLAVSLPRLSEDSRNRCLD
                     LLPRRAETEVRRLMDYPAGTAGRVMDSRIPSFRAEQPAAITLEQLRQSKPKDLRQLFI
                     VDAERRLVGIVDLQDLLIAEPTDLLKEISRPPSAAVSPFDDREEVAQKLRDFQLDVLP
                     VIDIHGRLIGAIRHEALLKTLEEAASVDIQMMVGAGREERALSEPQFAVRKRLPWLQI
                     NLATAFLAAAVVGLFEGTIAQFTALAVLLPVVAGQSGNAGAQALAVTMRGLALREIST
                     RHWFRVLFKETRVGIINGLAIALTTGVGVLVWSGNSGLALVICTAMVVSMVIAGVAGA
                     LIPIALTRLGQDPAQSSTIVLTTVTDVAGFMSFLGIATLLSSLL"
     gene            complement(4298..5125)
                     /locus_tag="VIQ99_06040"
     CDS             complement(4298..5125)
                     /locus_tag="VIQ99_06040"
                     /inference="COORDINATES: protein motif:HMM:NF015413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182740.1"
                     /translation="MSGREELASAYLRLHPESAARLLESMTPDQANAVLNAVDLPTAG
                     SVVGHMLPTYAARCVENQPPADSALLLERLGSQESVAVLRHLPNDHREAVLNSLGPQW
                     LMAFKLLLSYPTNTVGAWVEPRVLTLPDDCTVGEARDRIARSEHATQARIYVLDRSRR
                     LRGAVRGLMLLQMPSRKKVASILEPADAIWARDPLATAQEHGVWERHTEAPVINREEE
                     FIGVISYADLRKAFRQLTRSLGPNDDREIAEVTELISVGAGSLWQSLGDLIRTDRRR"
     gene            complement(5122..5952)
                     /locus_tag="VIQ99_06045"
     CDS             complement(5122..5952)
                     /locus_tag="VIQ99_06045"
                     /inference="COORDINATES: protein motif:HMM:NF017373.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182741.1"
                     /translation="MERLRAWGAQLVAVFSDTVESLVTYLPVVLSAIAVLLAGWLIAH
                     LIRSGVRRALESMDWLFARLVPRAGGRSETLARVTGRAVSNVVFWLVLLVFAASALRI
                     LGGTLFERWTENLLAYLPSAIGGVIIIVIGFTGGTVARYVLEQASVGLGVGQSSLLGR
                     LAQAVIVMSCIVIGIDQLGVNVNFLIQLTTVTAAAVFGGIALVFALGTRAHLANLIGA
                     HYARKHYAPGDNVKIGAVQGRVVEITDGCVFIETADGDVSVPGQQFSSEVFVKLRKPS
                     "
     gene            6085..7659
                     /locus_tag="VIQ99_06050"
     CDS             6085..7659
                     /locus_tag="VIQ99_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009724693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter family protein"
                     /protein_id="HEY9182742.1"
                     /translation="MLAVLLVGALLLGLVAARIGLPPLVGFLASGFVFRAVGMEGTPM
                     LEEIAHAGVLLLLFAVGLKLRIKTLLRYEVWGTAIAHLALTGLIGALLLSFRDGPVGL
                     AVALAVSFGFSSTVLAAKVLDGNKELRAVHGRVAIGILIVQDVVAVALLGFVNDETPS
                     PYAALLLLALPLARPVMAWVLERVGHGELLVLFGAILALGGGEAFDAVGVSPELGALL
                     LGTMLAGHRRAQELTNVLWGLKEVFLVGFFLNIGFRAPPTWDAVLDAVWLVLLLPVKG
                     AMFFLLLIGLGLRARTSFLTTVSLTTYSEFAVIVVAVAVDGGLLQPEWIVVTALAVAF
                     SFVVAAPFNAHAHSLFRWMSPLLERIERDKRHPDDEPISLGLAEILVVGMGRVGSGAY
                     DYLRQQNENIVGIDSDPAKIESGVREGRRVAYADAEDPAFWHLLNLDRLHAIMLALPD
                     LEAKVSAARALRRRGFRGLISATHLYPEERAPILAAGCDVTYNYYTEAGVGFARHTYE
                     TLHGKDANRESRTKIA"
     gene            7804..8310
                     /locus_tag="VIQ99_06055"
     CDS             7804..8310
                     /locus_tag="VIQ99_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006890230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEY9182743.1"
                     /translation="MAITIYDQLVPVFSHMLSNLDKVLTKAEADAAARKIDLDVFVNG
                     RLAPDMLPLTRQIQIMTDQAKGGASRLAGRESPKWADEEKTFADLHARIAKTLAHLKT
                     FKPSDFEGAETRDVELKFPNATLKFTGKDYFLSFVIPNFYFHYTTAYAILRHNGVPIG
                     KGDFLGNR"
BASE COUNT         1348 a         2778 c         2878 g         1427 t
ORIGIN      
        1 gccgtcggcg gccaagggat cacgctggcc gacgacgcgc tgacgcggga cagcgtgttg
       61 acgctcgagc gccgcacgcc ggcggggact caagggcagg cggcgacggg tcgaaccctg
      121 gaagagccgc agcaatttcg cctcatgctg cgcggcaacc gctgctggtt ggtgcgcgac
      181 acggacggac gcgagtggga gctccgcgaa acgagctgtg tgcctgcgca gcggtagcgg
      241 tcaacgcaag agatcgcgga gccgatcccg gatccgatct tcgatctctt cttgcagctg
      301 ttgccggacg agcctgctga agtccggcgt gatgctcggc tcggtcaccg tcccttcgat
      361 ctcgaagggc agcgagccgc ccacgaactg atcgagcgtg ttgcagcccg ggatcgcgat
      421 cgcgttcgtc agcgtcgcat cgaggtcgta atccaagtgc tgctcgacca gctgcaagct
      481 gccgcggccg ctgatgtcca tgaacgacgt gcgcgcgagc aggtcgttgc tctgtgccgt
      541 gccgcccgtg acggcggccg agcccttgat ctcgatgtat ggcgtttccg cgggttgctc
      601 gggcggcgcg ggcgcgcgct gcgtgaagtt gtaggcacgg cacaacgcgt gtcccaaatt
      661 gaagcccttg atcgcgccgt tcgtcatgct gaagctcacg tcgccggccg cggtctcgac
      721 gttcgcgatc acggtgcggc cggatcccgc gaggttcagg tcgaaattgc ctgtgccgct
      781 gaagtttgcg tcctcggcgg tcagcgctgt gatcagcggc gcaagatcga ggttcgcggc
      841 gcggccgtcg agcgcgagcc cgggccgatc gccggcggcg tgcacggtga agttgccatt
      901 gaacgtgccg ccgtacagtt gcgcgtgcag gttctgaagc ttcatgtcgc cgtcggcgat
      961 cgcgatgtgt ccgtccacgg attggaactg catgcccgcg agctcgagcg agccgacccg
     1021 catcgtgccg tcgaggttca tcgtgttgtt ctgcggcagc tcgatgtcgc cggccgtcgc
     1081 ttcgccggcc gccgcgtcgc gccgtttcgg cggtaagtag cgatccgcgt tcacacggtc
     1141 gacatcgagc gcgaatcggt acgacggccg ctcgaaatcg gcgagcgcga acgtaccgac
     1201 gatcgtggtg tcgtcgagct tcaacacgat gtcccggagg tcggcgctcg tgttcgtgac
     1261 cgtgaaacgc gtgctcaggg ttgcacgcgt gaacgcgtcc ggatccgagg tctgctgcgg
     1321 cggcaggccg aagcgccgca gcaggtcctg cggcgagaac tccgcaacgg cggcgctgcc
     1381 ggtccaggtc gcggcccgcg tgacgtcgcg gccggtgacc tcgccgctcg cgcgcagacc
     1441 gaagatctcg gcgcgcagcg gcgcgacggt caatgtgtcc gcgcccgcat cgaacgtgaa
     1501 cgtcgtgctg agctcgatca tcccgagctc gctggccgcg agattcggcg gcagcatgga
     1561 cgcgaatgtt ttcgcgaacg cgtcggccgg gaaccgtgaa gtcgcgatcg agccgcggaa
     1621 cacgttgccg cgttcaccgg gtattccctc gaggttgccg ttgatcgtgg cgccgagcac
     1681 tcgcgccgtg agatcgcgta atgcggcgcg gccggtgccc aagttcgtat cgaagcgtgt
     1741 atcgagggcc agcgagccca gcgcgctgac gtccacggtc ggcggcacgg ccgcgcgcaa
     1801 cagcgcctgc accgcggcgt tcggcgtgaa ctccgcgatc gcgatgcggc ccgcgagctc
     1861 gttctcgccc gtcaacgagc cctcgccgga cagccgtatg ccgagcgcct cggcccgcac
     1921 gttcgtcacg tcgatcacgc gcggttccgc ctgaaaacgg aacgcggcgc tgccggtcaa
     1981 cgagccgagc tcgcccgggt cgacgccctg cggtggcgac agctgcagct gctcgaacac
     2041 tcgagcgagc tcggccgatg cgacggccac gctgccctcg accgtcgggt tgtcgatgag
     2101 ctcggttccg gtcagttgcc aggtcgccga gacgccggcc atctcggtgc tgaggccctc
     2161 gaccgcgagt gtttgggtcg cgcgtgcgaa cgcgatccgc gcggcagtcg cctcgatcgc
     2221 acgagcgggc gcgccattgg ccgcgctcag ggttgccgcg accttcgcgt cccgcgccgt
     2281 gacggagccg tcttcggcga tcgtgacgac gccgctcgcc gcgagcgcga tcgccgcggc
     2341 cgagagttcg tcgttgaatt gcagcgccgt ctcgaacgcg agcggctcgc cgcggccgat
     2401 gccgcccgtc gtcagcgaca gcccggtcgc gctgtagcgc agctcgtcgg tgttctcgcg
     2461 ccagtacacg ctgccatcgc ggatccggac gccttcgatc gcgaacgttt gcgccggggc
     2521 cgcgctcggc tccgcgggcg cggcagcgtc cgcgccggag ctcatggcgt cgagcaggtc
     2581 ttgccagttg ccgcgaagct cggcgtcgcg ggcgagattc agcgtgacgc cctcgatctc
     2641 gaccgtgccg acctcgatgc ggcgcgagag tagcggcacg agcttgaccc gcgcggccac
     2701 gcgcgttgcg gacaggaaca gctgagtgtc gccgccgaag ctctgcgcgc tgcccacggt
     2761 gacgccgccg gtctcgaccg cgagccacgg aaagtagttg aggcgcaggt cctgctcgat
     2821 gctcagcgtt cgtcccgtgc gcgccctgaa cgtgtcggta gcgacgcctt tgtagtcgtt
     2881 cgggtcgaac gtgacggcca cgaccgcgac ggcgatcagc acgagcgcgg cgaacactcc
     2941 taccacggcg agcagaatct tgatggcacg catgcttcct cctagagcag gctggacagc
     3001 aaagtcgcaa tgccgagaaa cgacatgaag ccggccacgt cggtgaccgt ggtcaggacg
     3061 atcgtcgacg actgcgcggg gtcttgtccg aggcgtgtca gggcgatcgg gatcaacgca
     3121 cccgcgacgc cggcaatcac catcgacaca accatggcgg tacagatcac gagagcgaga
     3181 cccgagttcc cgctccagac cagaacgccg acaccggtcg tcaatgcgat cgcgaggccg
     3241 ttgatgatgc cgacgcgggt ctccttgaag agcacacgga accaatggcg cgtcgagatc
     3301 tcgcgcaagg cgagcccgcg catggtcacg gccaacgctt gggcgccggc gttgccggat
     3361 tggccggcga cgaccgggag caacaccgcg agcgccgtga actgcgcgat cgtcccctcg
     3421 aacaggccca cgacggctgc ggccaggaac gcggttgcga ggttgatctg cagccatggc
     3481 agccgcttgc gcaccgcgaa ctgcggttcg gacagcgcac gctcctcgcg gccggcgccg
     3541 accatcatct ggatgtcgac ggacgccgcc tcttcgaggg ttttcagcaa cgcctcgtgg
     3601 cgtatagcgc cgatcagccg gccgtggatg tcgatcacgg gcagcacgtc gagctggaaa
     3661 tcgcgcagct tctgcgcaac ctcctcgcga tcgtcgaacg gcgagacggc cgcgctcggc
     3721 ggtcgcgaaa tctccttcag cagatccgtc ggctctgcga tcagcaggtc ctggaggtcc
     3781 acgatgccga cgaggcggcg ctcggcgtcg actatgaaga gctgacgcag atctttcggc
     3841 ttgctctggc gcagctgctc gagcgtgatc gccgcgggtt gctcggcgcg gaagctcgga
     3901 atccgcgagt ccatgacgcg gcccgcggta ccggccgggt aatccatgag ccgccgcacc
     3961 tcggtctcgg cgcgccgcgg cagcagatcc aggcagcgat tgcgcgagtc ctcggacaga
     4021 cgcggcagcg acacggcgag cacgccggga tcgagcgagt gcagcgcctg cttcaacagt
     4081 ctctcgggca gggccggcac gatctcgtcg atacgcgcag gcgacaggtg ccgccacacg
     4141 ttcgcgagtg tgtctgcctg atggtcggcg agcacctcgg tcgccgcggc gcggccgaag
     4201 ccgtcgatca cgtcggctgc ttgcgccgga tgctcgagca ggaattgccg attgactcgg
     4261 tcgagagcga ggttgcgagt ggcctcgtcc atggcggtca gcggcggcgg tccgtgcgga
     4321 tcaagtcgcc caagctctgc cagaggctgc ctgccccgac ggagatcagc tcggtgacct
     4381 cggcgatctc gcgatcgtcg ttcggcccga gcgagcgcgt gagctggcgg aacgccttgc
     4441 gcagatccgc gtacgagatc acaccgatga attcttcctc gcggttgatc acgggcgctt
     4501 cggtgtgccg ctcccagacg ccgtgctcct gcgccgtcgc gagcgggtcg cgtgcccaga
     4561 tcgcatcggc cggctcgagg atcgacgcaa ccttttttcg gctcggcatc tgcagcagca
     4621 tgaggccgcg cacggcgccg cgcaggcgcc gcgaccgatc gagcacgtag atgcgtgcct
     4681 gcgtcgcatg ctcgctgcgg gcgatgcggt cgcgagcctc gccgaccgtg cagtcgtcgg
     4741 gcagggtcag cacgcgcggc tcgacccatg cgcctacggt attcgtcggg tagctcagca
     4801 gcagcttgaa cgccatcagc cattgggggc cgagtgaatt caacacggcc tcgcgatgat
     4861 cgttcggcaa atggcgcagc actgcgaccg attcctggct cccgaggcgc tcgagcagca
     4921 gcgcgctgtc ggccggcggc tggttttcga cgcagcgcgc ggcatacgtc ggcagcatgt
     4981 gaccgacgac cgatccggcg gtcggcagat ccacggcgtt cagcacggca ttcgcctgat
     5041 ccggagtcat cgactcgagc aggcgcgcgg cgctctcggg atggagccgc aaataggccg
     5101 aggccagttc ttcgcgcccg ctcacgacgg tttcctgagc ttgacgaaca cctcggagct
     5161 gaattgctgc ccgggaaccg agacgtcgcc gtcggcggtc tcgatgaaca cgcagccgtc
     5221 ggtgatctcg acgacgcgtc cctggaccgc gccgattttc acgttgtcgc cgggcgcgta
     5281 gtgcttgcgc gcatagtgtg cgccgatcag gttcgccaag tgcgcgcgcg tgccgagcgc
     5341 gaacacgagc gcgatgccgc cgaacaccgc cgcggccgtc accgtggtca gctgaatcaa
     5401 gaaattcacg ttgacgccga gctgatcgat gccgatcacg atgcagctca tcacgatcac
     5461 ggcttgagcg agccggccga gcaagctgct ctggccgacg ccgagcccga ccgaggcttg
     5521 ctcgagcacg tagcgcgcga ccgtgccgcc ggtgaagccg atcacgatga tgatcacgcc
     5581 gccgatcgcc gagggcagat acgcgagcag gttctcggtc cagcgctcga acagcgtgcc
     5641 gccgagaatc cgcagcgcgc tcgccgcgaa cacgaggagc acgagccaga acacgacgtt
     5701 cgagaccgcg cggccggtga cccgcgcaag agtttcgctg cggccgccgg cccgcggcac
     5761 gagccgtgcg aacagccagt ccatgctctc gagcgcacgg cgaactccgc tgcggatcag
     5821 atgcgcgatc agccaaccgg ccaacaggac cgcgatcgcg gagaggacca cgggcaagta
     5881 cgtcacgaga ctctcgaccg tgtcgctgaa cacggcgacg agctgtgctc cccaggcccg
     5941 tagtcgttcc atgcaaactc caggatgacc gcagccgcca tcctacttga ctcgtgtaaa
     6001 gctcgggaga cggacttctc aaacacgagc gccgattgca tgacctccgc ataatgggca
     6061 ggggcttgga tcggggattc gggaatgctc gcggtcttgc tggtgggagc actgctgctc
     6121 ggtctcgtcg cggcgcgcat cggtctgccg ccgctggtcg gcttcctcgc gtcggggttc
     6181 gtgttccgcg cggtcgggat ggaaggcacg ccgatgctcg aggagatcgc gcatgccggc
     6241 gtgttgctgc tgctgttcgc agtcggtttg aagcttcgga tcaagacgct gctgcgttac
     6301 gaggtctggg gcaccgcgat cgcgcatctc gcgttgacgg gcctgatcgg cgcgctcctg
     6361 ttgtcgttcc gcgacggtcc agtcggcctc gcggttgcgc tggcggtctc attcgggttc
     6421 tcgagcacgg tgctcgccgc aaaagtgctg gacggcaaca aggagctgcg cgcggtgcac
     6481 ggccgcgtcg cgatcggcat cctgatcgtg caggacgtcg tcgctgtcgc gctgctcggc
     6541 ttcgtgaacg acgagacgcc gtcgccgtat gcggcgctgt tattgctggc gctgccgctt
     6601 gcacgtcccg tcatggcgtg ggtactggaa cgagtcggtc acggcgagtt gctcgtgctg
     6661 ttcggagcga ttctcgcgct cggcggcggc gaggcgttcg acgccgtggg ggtcagcccc
     6721 gagctcggag cgctgttgct cggcacgatg ctcgcgggcc accgccgcgc gcaagagctc
     6781 acgaacgtgc tgtggggctt gaaagaggtg ttcctggtcg gtttcttcct gaacatcggt
     6841 ttccgtgcgc cgccgacctg ggacgccgtg ctcgatgccg tgtggctcgt gctcttgctg
     6901 cccgtgaagg gagcgatgtt cttcctgttg ctgatcggcc tcgggttgcg cgcgcgcacg
     6961 agcttcctga cgaccgtgag cctcacgacg tacagcgagt tcgccgtgat cgtcgtcgcc
     7021 gtagcggtcg atggcggcct gctccagccg gagtggatag tcgtgacggc gctcgcggtc
     7081 gcgttctcgt tcgtcgtggc cgcgccattc aacgcgcacg cccatagcct gttccgctgg
     7141 atgagcccgc tgctcgagcg tatcgagcgc gacaagcgtc accccgacga cgagccgatc
     7201 tctctcggcc tggcagaaat cctggtcgtc ggcatggggc gtgtcggctc gggcgcctat
     7261 gactacctgc gccagcagaa cgagaacatc gtcggcatcg acagcgatcc cgcgaagatc
     7321 gagtccggcg tccgcgaagg gcggcgcgtc gcttacgcgg acgccgaaga cccggccttt
     7381 tggcatttgc tgaatctcga tcgcttgcac gcgatcatgc ttgcgctgcc cgacctcgag
     7441 gcgaaggtgt cggcggcgcg cgcgctgcgg cgccgcggtt ttcgcggcct gatcagcgcg
     7501 acacatctgt accccgagga gcgcgcgccg atcctcgcgg caggctgcga cgtcacctac
     7561 aactattaca ccgaggccgg ggtcggcttc gcgcgccata cgtacgaaac gctgcatggc
     7621 aaggacgcca accgagaatc tcgaacgaaa atcgcgtgag tagccgcgat tcggggttcg
     7681 tgctcccgac ttgcgcaacg tgttcccggg ctagcgcata tataaggtgt cgtcgggcta
     7741 tgcgttccgc cccggcgctc ttatgatggc gccctcaatt aaccggtgcc aagaggatac
     7801 acagtggcca tcacgattta cgatcagctc gttcccgttt tctcgcacat gttgtcgaac
     7861 ctcgacaaag tgctgaccaa agccgaggcg gatgccgccg cgcgcaagat cgatctcgat
     7921 gtgttcgtca acggccggct cgcgccggac atgcttccgc tgacgcgcca gattcagatc
     7981 atgaccgacc aggccaaggg aggcgcgagt cgcctcgcgg gccgggagtc gccgaagtgg
     8041 gccgatgagg agaagacgtt cgcggatttg cacgcgcgga tcgcaaagac gctggcgcat
     8101 ttgaagacat tcaagccgtc ggacttcgaa ggagccgaga cgcgcgacgt cgagctcaag
     8161 ttcccgaacg cgacgctgaa gttcacgggc aaggactact tcctgagctt cgtgatcccg
     8221 aacttctact tccactacac gacggcgtac gcgatcctgc gccacaatgg cgtgccgatc
     8281 ggcaaaggtg acttcctcgg caatcgctag tcatgcggcc gaagagtcgc ttcgtttccg
     8341 agggaccccg acagcggggg tcctccgggg acgccgtgaa tacgtccctg taggctcgcg
     8401 cgcgcacatc catgtgcgcg agcgccccgg a
//
LOCUS       DATCUD010000411         2212 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46559, whole genome shotgun sequence.
ACCESSION   DATCUD010000411 DATCUD010000000
VERSION     DATCUD010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46559"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1169
                     /gene="gatA"
                     /locus_tag="VIQ99_06060"
     CDS             <1..1169
                     /gene="gatA"
                     /locus_tag="VIQ99_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018953305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEY9182744.1"
                     /translation="APYDATIVERLSKAGAVMLGKTNMDEFAMGSSNETSFYGPVVNP
                     WNHALVPGGSSGGSAAAVAARVAPAATGTDTGGSIRQPAALTGITGIKPTYGRVSRYG
                     MIAFASSLDQAGTLTQTAEDAALLLETMAGYDPRDSTSLDEPVPRYSQIVNEPWDDIT
                     IGVPESFFESGLDAASASAIRAALAELEKLGAKLKRIELEYIHLSVPAYYVVAPAEAS
                     SNLARFDGVRFGHRSEQAGSDLTAFYMRNRGEGFGAEVKRRILTGTYVLSAGYFDAYY
                     LQAQKVRKLISDDFARAFRDVDIVAGPTTPSPAFGIGQKTSDPIEMYLNDIYTIGANL
                     AGLPAMSLPCGFARNLPVGLHLVAPPLAEARLLKAAHHFQRATDWHQRVPAAYA"
     gene            1175..>2212
                     /gene="gatB"
                     /locus_tag="VIQ99_06065"
     CDS             1175..>2212
                     /gene="gatB"
                     /locus_tag="VIQ99_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEY9182745.1"
                     /translation="MQWEIVIGLEIHAQLATKSKIFSGASTQYGAPPNSQASLVDLGY
                     PGVLPVLNGEAVTLAVKFGLATQCEISRRSVFARKNYFYPDLPKGYQISQYELPIVHG
                     GHVDVVLEDGSTRRVGIVRAHLEEDAGKSLHEDFAGMSGIDLNRAGTGLLEIVSAPDL
                     RSSGEAGAYMRKIHALVRYLTICDGNMQEGSFRCDANVSVRPHGESKLGTRTELKNLN
                     SFRFVEQAIDIEAARQIELIEGGGKVVQETRLYDPDRQETRPMRSKEEANDYRYFPDP
                     DLLPVVIDEALISAVRASLPELPDAKRERFMRDYALPAYDAQVLTVERPLADYYEAVA
                     KATKATPKIAAN"
BASE COUNT          388 a          730 c          723 g          371 t
ORIGIN      
        1 tcgcgccgta cgacgcgacg atcgtcgagc gtctcagcaa ggccggcgcg gtgatgctcg
       61 gcaagacgaa catggacgag ttcgcgatgg gctcgtcgaa cgagacgagc ttctacggcc
      121 cggtcgtgaa cccgtggaat cacgcgctcg tgcccggcgg ctcgtcagga ggctcggctg
      181 cggcggtcgc cgcgcgcgtc gcgcctgcgg cgacgggcac cgacaccggc ggctcgatcc
      241 gtcagcccgc ggcgctgacc ggcatcaccg gtatcaagcc gacctatggg cgcgtctcgc
      301 gctacggaat gatcgcgttc gcgtcgagcc tcgaccaggc gggcacgctg acgcagaccg
      361 ccgaggatgc ggctttgttg ctcgagacga tggcgggcta cgatccgcgc gattcgacct
      421 cgctcgacga gcccgttccg cgctactcgc aaatcgtgaa cgagccttgg gacgacatca
      481 ccatcggcgt gccggagagc ttcttcgaat ccggcctcga tgctgccagc gcgagtgcga
      541 tccgcgcggc gctcgccgag ctcgaaaagc tcggcgcgaa attgaagcgc atcgagctcg
      601 agtacatcca cctgtcggtg ccggcgtatt acgtcgtggc tccggcggag gcttcgtcga
      661 atctggcgcg cttcgacggc gtgcgattcg gtcaccggtc cgagcaagcc ggcagcgatc
      721 ttaccgcgtt ctacatgcgc aatcgcggcg aagggttcgg cgccgaggtc aagcgccgta
      781 tcttgaccgg cacgtacgtg ctgtcggccg gctacttcga cgcctattac ttgcaggcac
      841 agaaggtgcg caagctgatc agcgacgatt tcgcgcgcgc attccgcgac gtcgacatcg
      901 tcgcgggccc gacgacgccg tcgccggcgt tcgggatcgg ccagaagacc agcgatccga
      961 tcgagatgta cttgaacgat atctacacga tcggcgcgaa cctcgcgggc ttgcccgcga
     1021 tgtccttgcc gtgtggcttc gcgcgcaacc tgccggtcgg gctgcacctc gtcgcgccgc
     1081 cgctcgccga ggcgcgcctg ctcaaggcag ctcatcactt tcaacgcgcg accgattggc
     1141 accaacgagt gccggccgcg tacgcgtgat cgccatgcag tgggaaatcg tcatcggcct
     1201 cgagatccat gcgcagcttg cgacgaagtc gaagatcttc tccggggcgt cgacccagta
     1261 cggcgctccg ccgaacagcc aagcgagcct ggtcgatctc ggttatcccg gcgtgctgcc
     1321 ggtattgaac ggcgaagcgg tcacgctggc cgtgaaattc ggcctcgcga cgcagtgcga
     1381 gatctcgcgt cgctcggtgt tcgcgcggaa gaattacttc tatccggact tgccgaaggg
     1441 ctaccagatc agccagtacg agctgccgat cgtgcacggc ggtcatgtcg acgtcgtgct
     1501 cgaggacggc agcacgcgcc gcgtcggcat cgtgcgcgcg catctcgagg aagacgccgg
     1561 caagtcgttg cacgaggact tcgccggcat gtccggcatc gacctgaatc gcgccggcac
     1621 cggcttgctc gagatcgtgt ccgcgccgga tctgcgctcc tcgggcgagg ccggcgcgta
     1681 catgcgcaag attcacgccc tcgtgcgcta ccttacgatc tgcgacggca acatgcagga
     1741 aggctcgttc cgttgcgacg cgaatgtctc cgtgcgtccg cacggcgaga gcaagctcgg
     1801 cacgcgcacg gagctcaaga acctgaattc gttccggttc gtcgagcagg ccatcgacat
     1861 cgaggccgcg cgtcagatcg agctcatcga gggcggcggc aaagtcgtgc aggagacgcg
     1921 cctctacgat cccgaccgtc aagaaacgcg gccgatgcgc agcaaggagg aagcaaacga
     1981 ctatcgttac ttcccggatc ccgatctctt gccggtcgtg atcgacgaag cgctgatttc
     2041 cgccgtgcgt gcatcgctgc cggagctgcc ggacgcgaag cgcgagcgct tcatgcgcga
     2101 ctacgcgctg cccgcctacg acgcgcaggt attgaccgtc gagcggccgc tcgccgatta
     2161 ctacgaagcc gttgcaaagg cgacgaaagc aacgccgaag atcgcggcga ac
//
LOCUS       DATCUD010000412         4671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_10983, whole genome shotgun sequence.
ACCESSION   DATCUD010000412 DATCUD010000000
VERSION     DATCUD010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4671
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10983"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..392)
                     /locus_tag="VIQ99_06070"
     CDS             complement(<1..392)
                     /locus_tag="VIQ99_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007509457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9182746.1"
                     /translation="MTALVSIEQVVKGYVRGRQRVEVLHAIDLTVEQGEFLALMGPSG
                     SGKTTLLNLIGGLDRPDSGSITVAGQRIDQLSSGQLAKWRARNVGFIFQFYNLLPVLT
                     AERNVEVPLLLTGLSSSERKRNVAAALEL"
     gene            complement(459..1697)
                     /locus_tag="VIQ99_06075"
     CDS             complement(459..1697)
                     /locus_tag="VIQ99_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018444368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9182747.1"
                     /translation="MDQASLIEQLRIERPVPVARSRGVLWWSAGAMAIAVLGAAVFLL
                     VPRGVPIRVALAEVAPADSPIAAVSILDASGYVVARRQATVSAKITGKVVSVAIEEGQ
                     HVERDQVIARLDDSNARATVGQARAQLEQSKANLVAAEVAFANAEPTFRRNEQQLARA
                     VISAQAFDTAKTNYDAVRTSLDVAVRAVEVMEANLALAERSLDDTVVRAPFAGIVTVK
                     AAQEGEMVSPISAGGGFTRTGIGTIVDMGSLEVEVDVSESFINRVEPEQPVTVKLNAY
                     PDWSIPARVIAIIPTADRAKATVKVRVALDADDPRILPEMGARVAFLPRETLAAPASS
                     ATFTRERPLLVPKEAVQGSGDTGVIFVVADDSVERRTVRLGAQSGAGQLVLSGVTAGT
                     RVALGDLSLLADNVRVRIVE"
     regulatory      2018..2100
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            2102..3529
                     /locus_tag="VIQ99_06080"
     CDS             2102..3529
                     /locus_tag="VIQ99_06080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182748.1"
                     /translation="MTLESLLAITPFPAVSALLWVVVTMAVLYLARNSAHHVLLTLCQ
                     ALHDMLNLAVQAITTSEKKLLQRNHEVLLAAGREAKERIVEREFVRIGDSVHKDLAGY
                     PGLQRTLSEAITRLDDDHKRAAEVPPEPTAWVKAVDVVAKLDRQELSVGPLLADIHDS
                     LVKAQTNALKEYRAASAKRHSLLQRMMPEWRRVQRTLDRVNKSIDSLLERSRSIDRHL
                     NEYREIVQGTDRSLQVLSSSSLVQFFISALVLAVAVAGAAINFSLIARPMAEMVGGTS
                     FIGGFRTADIAALVIIMVEISMGLFLMESLRITRLFPVIGALSDKLRGRLGVVTFVIL
                     FLLASVEAGLAYMREILLQDELATSALLRGGDAVAVNPFMWITTAAQMGMGFTLPFAL
                     VFVAIPLETFVHSLRTVLGLLGIGGLRLLRLVLRLLSSIFVHLGTASVRIYDIPIFMP
                     LWIEHRWRKGTPPRVGGKRGAEVAP"
     gene            3577..4185
                     /locus_tag="VIQ99_06085"
     CDS             3577..4185
                     /locus_tag="VIQ99_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020410547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HEY9182749.1"
                     /translation="MLLATACSPPAPRSTGVYLLLDTSGTYREELDKAKQIINYTLSR
                     LEALDSFAVARIDTGSFSERDIMAKVTLDDRPSAANQQKRDFATNIERSLASVPASPY
                     TDITGGLLQAVEFLNEKQPGRKTILIFSDLKEDLEAGYVRDIAVPVEGFEVVALNVTK
                     LRSDNVDPREYLDRLEAWKQRVEAEGGTWRVINDLDRLETLL"
     gene            complement(4267..>4671)
                     /locus_tag="VIQ99_06090"
     CDS             complement(4267..>4671)
                     /locus_tag="VIQ99_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009548331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HEY9182750.1"
                     /translation="IPGAFVIGLAAGVVCLWGCTGLKKMIGADDSLDVFGVHGLGGIL
                     GALLTGVFNAPSLGGPGVVTDWVTVAMGYPGIGAQLWIQAKAVGVVVVWTAVVSLVGF
                     YVVKAVLGLRVAEEQEREGLDITSHGERAYTG"
BASE COUNT          852 a         1561 c         1449 g          809 t
ORIGIN      
        1 agctcgagag cggcggcgac gttgcgtttg cgctcggagc tcgagaggcc ggtcaagagc
       61 agaggaactt cgacgttgcg ttcggccgtc agcaccggca acaggttgta gaactggaag
      121 atgaagccga cgttgcgcgc acgccatttc gcgagctggc ccgacgagag ctggtcgatc
      181 cgctggcccg cgaccgtaat cgagccggag tcggggcgat cgaggccgcc gatcagattc
      241 agcagggttg tcttacccga gccggacggc cccatcaacg cgaggaactc gccctgttcg
      301 accgtcagat cgatcgcgtg aagcacctcg acacgctgcc ggccgcggac gtatcccttc
      361 accacttgct cgatcgagac caacgctgtc atggccactc ctcgaaaaaa gacgtctaca
      421 cgggacaata cgttacacgg cggactgaaa ttacacgctc attccacgat tcgaaccctg
      481 acgttgtccg cgagcaagga caggtcgccg agcgccacgc gcgtccctgc cgtgaccccg
      541 gacagcacga gttgacccgc gccgctctgg gcgccgagtc gtactgtccg ccgctcgacg
      601 ctgtcgtcgg cgacgacgaa gatcacgccg gtgtcgccgc tcccctgtac cgcttccttc
      661 ggcacgagca gcggacgttc ccgagtgaag gtcgccgacg acgccggcgc cgcaagtgtc
      721 tcgcgcggca ggaatgcgac ccgcgcaccc atctccggga ggattcgcgg atcgtcggca
      781 tcaagggcga cacgaacctt gaccgtagcc ttggcgcgat ccgcggtcgg aatgatcgcg
      841 atcactcgcg cggggatgct ccaatccgga tacgcattca gtttcaccgt aaccggctgc
      901 tccggctcga cgcggttgat gaagctctcg ctgacgtcga cctcgacctc gagagagccc
      961 atgtcgacga tcgtgccgat gccggtccgc gtgaagccac cgccggccga gatcggcgag
     1021 accatttcgc cttcctgcgc ggccttcacg gtcacgattc ctgcgaacgg ggcgcgaacg
     1081 acggtgtcgt cgagactgcg ctccgcgagc gcgagattgg cttccatgac ctcgacggcg
     1141 cgcacggcaa cgtcgaggct cgttcgcacg gcgtcgtagt tggtcttcgc cgtatcgaac
     1201 gcttgcgcac tgatcacagc acgcgcgagc tgttgctcgt tgcgacgaaa cgtcggctcc
     1261 gcattggcga acgcgacttc ggcggcgacg agattggcct tgctctgctc gagctgtgcg
     1321 cgtgcttgcc ccaccgtcgc gcgagcgttg ctgtcgtcga gccgcgcgat gacttgatcg
     1381 cgctcgacgt gttgcccctc ttcgatcgcg acgctcacga ccttgcccgt gatcttggcc
     1441 gacacggttg cttgacgacg cgcgacgacg taacccgacg catcgagaat cgacactgcc
     1501 gcgatcggag aatctgccgg tgcaacctcc gcgagcgcga cacgaatcgg cacgccgcgc
     1561 ggcacgagca agaacactgc cgcaccgagc accgcaatcg ccatcgcacc agcgctccac
     1621 cacaagacgc cgcgcgaacg cgcaacgggc accggtcgtt ctattcgcag ttgctcgatc
     1681 aatgacgctt gatccacgcg actccctccc tctctcgact ccgtcggtag caggttccat
     1741 gccagagttg ggagcatcgt cacaactcta tgagtcgatt cacttttttc taactctgtc
     1801 ccggtccagc ggcgcgacgc cgcgcagtgc attcggctaa ggcgtagtga aacgccacaa
     1861 cagttgcggt ttgcgtcacg cacgcgcgcg tggacgcgca acagctccgc ccccggcacg
     1921 acataacgac ggcacacatg ctgaggcgtg ctgcacggac cgtgtgttcg agcgcgaagt
     1981 ttgacaacgt cacccccgcg ggccgatcct tcgccgcgac tgaaaaaggc acaccttccg
     2041 aaaggaaggg ccgcaaagct accggtctaa cgggaaacct acgacagcgg ggtcgccagc
     2101 catgacgctc gagagccttc tcgcgatcac tccttttccg gccgtctccg ccctgctatg
     2161 ggtcgtggtg accatggcgg tgctgtatct cgccaggaat tcggcccatc acgtgctgct
     2221 gacgctctgt caggcgctgc acgacatgct gaacctcgcc gtgcaagcga tcacgaccag
     2281 cgagaagaag ctgctgcagc gcaatcatga ggttctgctc gcagccggcc gcgaggcgaa
     2341 ggagcgaatc gtcgagcgcg agttcgtgcg catcggcgac agcgttcaca aggacctcgc
     2401 cggctacccg ggcttgcagc gcacgttgag cgaagcgatt acgcgcctcg acgacgatca
     2461 caagcgcgcc gccgaggtgc cgcccgagcc gacggcttgg gtcaaggccg tcgacgtggt
     2521 cgcgaagctc gatcgccaag agttgtcggt cggaccattg ctggccgata ttcacgactc
     2581 gctcgtcaaa gcgcagacga acgcgctcaa agagtatcga gccgcgagcg cgaagcgtca
     2641 ttcgttgctg cagcgcatga tgccggagtg gcgccgcgtg caacgcacgc tcgaccgcgt
     2701 caacaagagc atcgacagct tgctcgagcg ttcgcggtcg atcgaccgcc acttgaacga
     2761 gtatcgggag atcgtgcagg gcacggatcg atcgttgcag gtgttgtcgt cctcgtcgct
     2821 cgtgcagttc ttcatttccg cgctcgtgct ggcggtagcc gtcgccggcg ctgcgatcaa
     2881 cttctcgctg atcgcgcggc cgatggccga aatggtcggc ggcacgagct tcatcggcgg
     2941 cttccgcacc gccgacatcg cggcgctcgt gatcatcatg gtcgagatct cgatgggtct
     3001 gttcctgatg gagtcgctgc gtatcacgcg cctgtttccg gtcatcggcg cgctgtcgga
     3061 caagctgcgc ggacgcttgg gtgtagtgac gttcgtgatc ctgttcctgc tggcttcggt
     3121 cgaagcgggg ctcgcctaca tgcgcgagat cctgctccag gacgagctcg cgacttccgc
     3181 gttgctgcgc ggtggggatg ccgtggccgt gaatccgttc atgtggatca cgacggccgc
     3241 gcagatgggc atgggcttca cgctgccgtt cgcgctcgtg ttcgtcgcga tcccgctcga
     3301 gaccttcgtg cactcactgc gaacggtgct cggcctgctc ggcatcggcg ggttgcgcct
     3361 gctgcgcctg gtgctgcgat tgctcagcag catcttcgtg cacctcggca ccgcgtcggt
     3421 ccgcatctac gacattccga tttttatgcc gctgtggatc gagcatcgct ggcgcaaggg
     3481 aacgccgccg cgtgtcggcg gcaagcgcgg agcggaggtg gcgccgtgag catccaccgc
     3541 ctgccccggc cgctcgtcgc ggtagccacg gtcgccgtgc tgctggccac ggcgtgctcg
     3601 ccgcccgcgc cgcgcagcac gggcgtgtat ctgcttctcg atacgtccgg gacttaccgc
     3661 gaggagctcg acaaggcgaa gcagatcatc aactacaccc tgtcgcggct ggaggcactg
     3721 gattcgttcg cggtcgcgcg gatcgacacc ggcagcttca gcgagcgcga catcatggcc
     3781 aaggtgacct tggacgaccg gccgagcgcc gcgaaccaac agaagcgcga cttcgccaca
     3841 aacatcgagc gctccttggc ttcggttccc gcatctccct atacggacat cacgggcggt
     3901 ctgctccagg ccgtcgagtt cctgaacgaa aagcaaccgg gacgaaagac gatcctgatc
     3961 ttctccgacc tcaaggaaga cctcgaagcg ggttacgtgc gcgacatcgc cgtgccggtc
     4021 gaaggattcg aagtcgtcgc gttgaacgtc acgaagctgc gaagcgacaa cgtggatccg
     4081 cgcgagtacc tcgatcgact cgaggcatgg aaacagcgcg tggaagccga aggcggcact
     4141 tggcgcgtga tcaacgacct cgaccgcctc gaaacgctgc tgtagcaaga cgcggctcgc
     4201 actaagaaaa aggccggcaa cctcgcggtt gccggccaaa ttacggtcct gactctcgaa
     4261 ctctgactaa cccgtgtagg cacgctcgcc gtgcgacgtg atgtcgaggc cctcgcgctc
     4321 ctgctcttcc gcgacgcgca gaccgaggac ggccttcacg acgtagaagc cgaccaggga
     4381 aaccacggcg gtccagacga cgaccacgcc gacggccttc gcctgaatcc acaactgcgc
     4441 accgatgccc ggatatccca tcgccaccgt gacccagtcg gtcacgacgc cggggccgcc
     4501 caagctcggc gcgttgaaca cgccggtcag gagagcgccc aagataccac ccaagccgtg
     4561 gacaccgaac acgtcgagcg aatcgtcggc gccgatcatc tttttgaggc ccgtgcagcc
     4621 ccacagacag acgacgcctg cggccaaccc gatcacgaac gcgcccggga t
//
LOCUS       DATCUD010000413         1935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46598, whole genome shotgun sequence.
ACCESSION   DATCUD010000413 DATCUD010000000
VERSION     DATCUD010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46598"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="VIQ99_06095"
     CDS             <1..469
                     /locus_tag="VIQ99_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006561300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY9182751.1"
                     /translation="GGEAKAAIARKAGAAATIDYRTQDFEAEIKRLTNGRGVDVVYDS
                     VGKDTFDKSLDCLRPRGMLALFGFSSGPVAPFDPAVLGAKGSLFLTRPGLNQYIATRD
                     ELVARASDLFAWLAAGKLKVTVDREWRLEDAARAHEALEGRRTAGKLLLVPGA"
     gene            complement(503..955)
                     /locus_tag="VIQ99_06100"
     CDS             complement(503..955)
                     /locus_tag="VIQ99_06100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182752.1"
                     /translation="MPPRKSLQLFASITAAKMARRANSRLWSLLERMPLAGWRVSRGE
                     RAYARRQCTLLLQIYEQLRTEHSSLDGDELYARIVEHGLDCDPTAARSIVLGADRSYA
                     QWPTERDVTFRDVATFLLMNQLLPPHSKTLGIQANVMAIVASTISPRL"
     gene            complement(979..1512)
                     /locus_tag="VIQ99_06105"
     CDS             complement(979..1512)
                     /locus_tag="VIQ99_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9182753.1"
                     /translation="MARMIYFALLLCVVATAWPADAQTPVEVPVGDKLSDATLRGLNG
                     PERNLSEFFGRPLIINVWASWCGPCRAEMASLERLAWLDESRDLTIIGISTDDYEDRA
                     VEALTKSNATITHFIDANLQMEKMLGASRLPLTVFVAADGRVLRRVYGAREWDSPAAL
                     ALIDSALRGRPEQPPAH"
     gene            complement(1513..>1935)
                     /locus_tag="VIQ99_06110"
     CDS             complement(1513..>1935)
                     /locus_tag="VIQ99_06110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9182754.1"
                     /translation="RKLGVPGEELPKVTYRLVDPAQYAGMHVLVVGGGDSAIESAVTI
                     SEERGTTVTLSHRSESFSRGKRKNRQRLEAAQAAGRLRVMLQSKVRKIEAAHVEIATP
                     TETVRIQNDAVIVNAGGVLPTEFLKSVGIEIQTKFGTR"
BASE COUNT          313 a          639 c          648 g          335 t
ORIGIN      
        1 cggcggcgaa gcgaaagcgg cgatcgcgcg caaagcgggc gcggccgcga cgatcgatta
       61 ccgcacccag gacttcgaag ccgagatcaa gaggctcacg aacggccgcg gcgtcgacgt
      121 cgtctacgac tcggtcggca aggacacctt cgacaagagt ctcgactgct tgcgaccgcg
      181 cggcatgctc gcgctgttcg gtttctcgag cgggcccgtc gcgccgttcg accccgcggt
      241 gctcggagcg aaaggctcgc tgtttctgac gcggccgggg ctgaaccagt acatcgcgac
      301 gcgcgacgag ctggtcgccc gcgcgagcga tctcttcgcg tggctcgctg ccggcaagct
      361 caaggtcacg gtcgatcgcg agtggcggct cgaggacgcc gcccgcgcgc atgaggcgct
      421 cgaaggtcgg cgcaccgccg gcaagctgct gctcgttccc ggcgcttgac gtcagtcggc
      481 gtgcgcgcgc gagcgagcgt gatcagaggc ggggcgaaat agtcgaggcc acgatcgcca
      541 tgacgttggc ctgaatgccg agcgtcttgc tgtgcggcgg cagcagttga ttcatcagca
      601 ggaacgtggc cacgtcgcga aacgtcacgt ctcgctcggt cggccactgc gcgtagctcc
      661 ggtccgcgcc gaggacgatg ctgcgcgccg ccgtcggatc gcaatcgagg ccatgctcca
      721 cgattcgcgc gtagagctcg tcaccgtcga gactcgagtg ctctgtccgg agctgttcgt
      781 agatctgcag cagtagcgtg cattgacgtc gagcataggc gcgttcaccg cgcgacacgc
      841 gccaaccggc cagcggcatg cgctcgagca ggctccagag ccggctgttg gcccggcgcg
      901 ccatcttcgc cgcggtgatc gacgcgaaga gttgcagcga ttttctcggt ggcacgtgcg
      961 cggccttcct gccgtgggct agtgtgcagg cggctgctcc ggtcgaccgc gaagcgcgct
     1021 atcgatcagc gccaaagcgg cgggggaatc ccattcccgc gcgccgtaga ctcgccgcag
     1081 gacgcggccg tcggcggcaa cgaacacggt cagcggcagc ctcgacgcgc cgagcatctt
     1141 ttccatctgc aggttggcat cgatgaagtg cgtgatcgtg gcattggact tggtcaatgc
     1201 ctcgaccgct cggtcctcgt agtcgtctgt ggagataccg atgatggtca agtcgcgcga
     1261 ttcgtcgagc cacgcgagcc gctccagcga tgccatctcg gcacgacagg ggccgcacca
     1321 gctcgcccac acattgataa tgagtggccg gccgaagaac tccgagagat ttcgctcggg
     1381 gccgttcagg ccgcgcagcg tcgcatcgct gagcttgtcg ccgaccggca cctccactgg
     1441 cgtctgcgcg tcggcgggcc acgccgtggc gacgacgcag agcagcagag cgaagtagat
     1501 catgcgtgcc atttagcgcg tcccgaattt ggtctggatc tcgatgccca ccgacttcag
     1561 gaactccgtc ggcagcacgc cgccggcatt cacgatcacg gcgtcgttct gaattcggac
     1621 ggtctcggtc ggcgtggcga tctcgacatg ggccgcctcg atcttgcgga ccttcgactg
     1681 cagcatcaca cgtaagcggc ccgcagcctg cgcggcttcg agccgctggc gattcttgcg
     1741 cttgccgcgc gagaaggact ccgaccggtg tgacagcgtc actgtcgttc cgcgttcctc
     1801 ggagatcgtg acggcgcttt cgatcgcgct gtcgccgcca ccgaccacga gcacgtgcat
     1861 accggcgtat tgtgccggat cgacgagccg ataggtgacc ttcggcaatt cttcgcccgg
     1921 cactccgagc ttgcg
//
LOCUS       DATCUD010000414         1695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60548, whole genome shotgun sequence.
ACCESSION   DATCUD010000414 DATCUD010000000
VERSION     DATCUD010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60548"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VIQ99_06115"
     CDS             complement(<1..631)
                     /locus_tag="VIQ99_06115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182755.1"
                     /translation="MRAWIVAAVLLVGPPLIVYWPTIFHEYGFRDDYAHLREVRERPG
                     WLMQLTSANGRPVYGLALEASLRDIHQVPELQVLRAMSAVLIGLVAALLWWQLRRSGW
                     NDAQSAALSAAVTVLPGAQIVVGWAIAWPIALALVTAVAGFLLVEGGLARAGPARVGL
                     VAAGAALYVTAGLTYQTSALFVVMPFAAALLLREGTTLSADAKWTVVHLG"
     gene            complement(873..>1695)
                     /locus_tag="VIQ99_06120"
     CDS             complement(873..>1695)
                     /locus_tag="VIQ99_06120"
                     /inference="COORDINATES: protein motif:HMM:NF016668.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HEY9182756.1"
                     /translation="RLIVHADDFGIAEPVNLGIMEAHDRGIVTSVSLMATGPAFDHAV
                     ALAHTRPKLDVGVHLVLTEHRPLTGTSVPSLVGADGRFAPHVTRLAGKRLRGAASLDE
                     VRMELDAQIRRVRATGLAVSHLDGHQHVHVLPGIAGVVADLAAAHGIAAVRYPAERVR
                     AYMLRNPHYLKRVVEQVALTAACAVSPLRGLRRSDDFVGFYFGGRLDEANLARVLAGL
                     PAGRTVELMCHPGGEGMHADDWQYAWVAERDALTSPRIRGLVEARSIELVSYRDV"
BASE COUNT          304 a          605 c          544 g          242 t
ORIGIN      
        1 accccaaatg cacgactgtc cacttggcgt cggcgcttaa cgttgtgcct tcgcgcagca
       61 gcagcgcagc cgcgaacggc atcacgacaa acagtgcgct ggtctgatac gtgaggcccg
      121 cggtcacgta caacgcagcg ccggccgcaa cgagccctac tcgagccggg cccgcacgcg
      181 cgagcccgcc ctcgacgagc agaaaccccg cgaccgcggt caccagcgcg agcgcgattg
      241 gccaggcgat ggcccaaccg acgacgattt gcgcgccggg caacacggtc acggccgcag
      301 acagcgccgc cgactgcgca tcgttccatc ccgagcgccg gagctgccac cacaagagcg
      361 cggcaacgag accgatcaat acggcgctca tcgcacgcag cacctgaagc tctgggacct
      421 gatggatgtc gcgcaatgac gcctcgagcg cgaggccata gaccggccgc ccgttcgccg
      481 acgtgagctg catcagccaa cccggccgtt ctcgcacctc gcgcaagtgt gcgtagtcgt
      541 cgcggaagcc gtactcatgg aagatggtcg gccaatagac gatcagcggc ggaccgacca
      601 agagcacggc cgcaacaatc cacgcacgca tggtcagtcc gcgtttcgca cggcgacgtc
      661 ggaatccgtc accgaatagc cggccccgac gctgaaaccg aggatcttgc taggcgccga
      721 cgtccgcgcg cttggactca ggcgcgatgt cggtgatctc ttaccccgcg gaatactcgg
      781 gcgactcgcc ggacccgtga ttttggccgc atgcggggcg cgatgttcgt cgtcgaactc
      841 gtcgaactcg acctcgtcca tgtttgttcg gctcagacgt ctctgtacga cacgagctcg
      901 atgctccgcg cctcgacgag cccgcgaatg cgcgggctcg tcagcgcgtc gcgctcggca
      961 acccaggcgt actgccaatc gtcggcgtgc ataccttcgc cccccgggtg gcacatcagc
     1021 tccacggtgc ggcccgcggg caaccccgca agcaccctcg cgaggttcgc ttcgtcgagt
     1081 cgccccccga agtaaaagcc tacgaaatcg tcgctgcgcc gcaagcccct taatggcgaa
     1141 accgcgcatg ccgcggtgag cgcaacctgc tccacgaccc gcttcaggta atgcgggttc
     1201 cgcagcatgt aggcgcgcac gcgctcggcc ggatagcgca cggccgcgat gccgtgcgcc
     1261 gcggcaaggt ctgccacgac gccggcgatg ccgggcagga catggacgtg ctggtgacca
     1321 tcgaggtgac tgacggcgag gccggtggca cgcacgcggc gaatctgcgc gtcgagctcc
     1381 atccggacct cgtccaacga ggccgcgccg cgcaggcgtt tgcccgcgag ccgcgtcacg
     1441 tgcggcgcga accggccgtc ggcacccacg aggctcggca ccgatgtgcc tgtgagtggc
     1501 cggtgctccg tcaacaccag atgcacgccg acatcgagct tcggacgggt gtgcgcgagc
     1561 gcgacggcgt ggtcgaacgc ggggcccgtc gccattagcg acaccgacgt cacgatgccc
     1621 cgatcgtggg cctccatgat cccgagattc acgggctcgg cgatgccgaa gtcgtcggcg
     1681 tgaacgatca ggcgc
//
LOCUS       DATCUD010000415         2023 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_39542, whole genome shotgun sequence.
ACCESSION   DATCUD010000415 DATCUD010000000
VERSION     DATCUD010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39542"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(180..1514)
                     /locus_tag="VIQ99_06125"
     CDS             complement(180..1514)
                     /locus_tag="VIQ99_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016337488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEY9182757.1"
                     /translation="MTTNGPSSEPTLHRAIGPKLLLFMVIGDMLGTGIYALTGDVAGE
                     VGGAAWLAFGAAFIVAMFTATSYLELVGKYPHAAGAALYAQRAFGSRFLTFVVGFAVM
                     CSALTSVGAASRTFAGYFQEFAAWPLALLVPLFIVGLAVLNFRGVAESVKANVAMTCV
                     ELAGLLIVIAVGIWALGNGIGTASNAFDFNAGADPFALVMSGAGLAFFAIIGFEDSVN
                     MVEEVENPQRDFPRAFFIGITITGIVYMLVAFFTTALVPIDILRDSNQDLLEVVRIGA
                     PWFPLALFALIAMVAVSNTSLINLMMSSRLLYGMSREKAIPPMFALVHVLPRTPWVAI
                     VATTVIALLLASWSGVRTLGGTTALLLLCVFALVNVAVLVLRRQAVPHAHYRAPTLCP
                     ILGAASCVYLAIGRDPAQYRIAGMLLLLGLGLFAINWLMGRRRAVDRVEPAG"
     gene            1574..>2023
                     /locus_tag="VIQ99_06130"
     CDS             1574..>2023
                     /locus_tag="VIQ99_06130"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182758.1"
                     /translation="MNKALAFGLTPLIAAATAHAHHSFAPHFDIDKPVDISGTVTLFE
                     ARNPHSYLHIAAVDENGKTTEYVCESHGFTQLTRNGITPEMLKPGTELRVDGSLSRHS
                     PTMCFFNNVYFPDGRAFSVNGPRSNAAARPATALPPRTDIFGTWLLAP"
BASE COUNT          393 a          704 c          643 g          283 t
ORIGIN      
        1 cgaccacgat cgcgctggcg cgcgcgagga actcgcggcg atccatgcgg ccgtgacagt
       61 actcgtcgta cagggcatag atgcgctgat cgatgtcgac gggctcggca gtccgaatca
      121 cttctggttg tgcagccatc tgttactcct cggattgagc ggcgatgcgt ggccggaatt
      181 taacccgccg gttcgaccct gtcgacggca cgcctgcggc ccatgagcca gttgatcgcg
      241 aacaatccga gcccgagcag cagcagcatg cccgcgatgc ggtactgcgc cggatctcgc
      301 ccgatcgcga ggtacacgca cgatgcggcg cccaagatcg ggcacagcgt gggggcgcgg
      361 tagtgcgcgt gcggcaccgc ctgccggcgc aacacgagca ccgcgacgtt cacgagcgca
      421 aacacgcaca agagcagcag cgccgtcgtg cccccgaggg tgcgcacgcc gctccagctc
      481 gcgagcagca gcgcgatcac ggtcgtcgcg acgatcgcga cccacggcgt gcgcggcagc
      541 acatgcacga gagcgaacat cggcggaatg gccttctcgc gcgacatgcc gtacaggagg
      601 cgcgacgaca tcatcagatt gatcagcgag gtgttgctga cggcgaccat cgcgatcaag
      661 gcgaacagcg cgagcgggaa ccacggcgca ccgatccgga ctacctcgag caagtcctga
      721 ttgctgtccc ggaggatgtc gatcggcacg agcgcggtcg tgaagaacgc gacgagcatg
      781 tacacgatgc ccgtgatcgt gatgccgatg aaaaacgcgc gcgggaagtc gcgctgcggg
      841 ttctcgacct cctcgaccat gttgaccgag tcctcgaagc cgatgatcgc gaaaaacgcg
      901 agccccgcgc cgctcatgac gagcgcgaac ggatccgcgc cggcattgaa gtcgaacgca
      961 ttgctcgcgg tgccgatgcc gttgccgagc gcccagattc cgaccgcgat cacgatcagg
     1021 agtcccgcga gctcgacgca cgtcatcgcg acattggcct tgaccgactc cgcgacgccg
     1081 cggaaattca gcaccgcgag gccgacgatg aacagcggca cgagcagcgc gagcggccac
     1141 gccgcgaact cctgaaagta ccccgcgaac gtccggctcg cggcaccgac cgacgtcaag
     1201 gccgagcaca tcaccgcgaa tcccacgacg aacgtcagga aacgactccc gaacgcgcgc
     1261 tgcgcataca gcgccgcgcc cgccgcgtgc gggtacttgc cgacgagctc gaggtacgac
     1321 gtcgccgtga acatcgcgac gatgaacgca gcgccgaacg cgagccaggc cgcgcccccg
     1381 acctctcccg cgacgtcgcc cgtgagcgcg tagatgcccg ttccgagcat gtcgccgatg
     1441 accatgaaca gcagcagctt cgggccgatg gcccggtgca acgtgggctc ggagctcggg
     1501 ccgttcgtcg tcatcgccgg cacgctagca aaatccgcta cggcgcgcga ccgccgcggc
     1561 ttatactcgt gcgatgaaca aagcgttggc gttcggtttg accccgctga tcgcggccgc
     1621 gacggcacac gcgcaccaca gcttcgcgcc gcacttcgac atcgacaagc ccgtcgacat
     1681 ctcgggcacc gtcaccctgt tcgaggcgcg caacccgcac agctatctgc atatcgctgc
     1741 cgtcgacgag aacggcaaga cgacggagta cgtctgcgag tcgcacggct tcacgcaact
     1801 cacacgcaac ggcatcacgc ccgagatgct gaagcccgga accgagcttc gcgtcgatgg
     1861 ctcgctgtcg cggcacagcc cgacgatgtg ctttttcaac aacgtgtatt tcccggacgg
     1921 ccgggcattc agcgtgaacg gcccgcgcag caacgcggcc gcgcggcccg cgactgcgtt
     1981 gccgccgcgc acggacatct tcggcacgtg gctgctcgcg ccg
//
LOCUS       DATCUD010000416         1640 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11026, whole genome shotgun sequence.
ACCESSION   DATCUD010000416 DATCUD010000000
VERSION     DATCUD010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11026"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="VIQ99_06135"
     CDS             complement(<1..349)
                     /locus_tag="VIQ99_06135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010960104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182759.1"
                     /translation="MAGRRVRVLLVDDHAVVRAGYRLLLQHVPGIEVVAEADSGELAC
                     RLHADLTPDVVVMDLALPGMGGLEAIKRMRMRDPAARILVFSMHEEPMFVERALAAGA
                     SGYVTKSSAPEALV"
     gene            complement(351..>1640)
                     /locus_tag="VIQ99_06140"
     CDS             complement(351..>1640)
                     /locus_tag="VIQ99_06140"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182760.1"
                     /translation="VLGTLLVIFNARRAVLQETESTAALALQLIEVAYANAKATRNPD
                     PSADIAAETGGEDRLRERLRGLAGVRHLEVLLIDDGRAVELARPEAEAVTAPRWFVSV
                     VAPAAMELKRTLDAGTEVVVRADPADEIAESWDDAWPLLLLVLGVAVVANGLFYVVIG
                     RWLGPVERIVAAMDGIEQGDYRSRLPAFQLPELGKVATQFNRMAEVLERSREQNRYLA
                     EQTIAIQEDERRVLARELHDELGQSIAAVKAVAASLAQAQETGGGAVDQGAATITQIA
                     NQMYGVVRGMLRRLRPVLLDEFGLVRALENLIDGWNERHADVFCRLAVDGRVDDLGDS
                     VDISIYRVVQECLTNVAKHAAASEVTIELERVADGRVRLRVHDDGVGFAPATAPPGLG
                     LLGIRERIEALQGSFSIEAAPGHGVALDIELPVDPGR"
BASE COUNT          272 a          592 c          522 g          254 t
ORIGIN      
        1 taacgagggc ctccggcgcg ctgctcttcg tgacgtaccc cgatgcgccg gccgccaatg
       61 cgcgttcgac gaacatcggc tcctcgtgca tgctgaaaac gaggatgcgc gcggcgggat
      121 cgcgcatccg catgcgcttg atggcttcga gaccgcccat gcccggcaat gcgaggtcca
      181 tgaccacgac gtcgggcgta aggtccgcat gcaggcggca cgcgagctcg ccgctgtcgg
      241 cctctgcgac aacctctatg cccggcacgt gctgcaacaa caatcgatag cccgcgcgca
      301 cgacggcatg gtcgtcgacg agcagcactc gaacgcggcg gcccgccatc tcagcgcccc
      361 gggtcgacgg gcagctcgat gtcgagcgcg acaccgtgcc ccggcgccgc ctcgatcgag
      421 aatgagccct gcagcgcctc gatgcgttcg cgaatgccga gcaggccgag accgggcggc
      481 gcggtggccg gtgcgaagcc gacaccgtcg tcgtggacgc ggagacggac gcggccgtcc
      541 gccacgcgtt cgagctcgat cgtgacctcc gaagcggcgg cgtgcttcgc gacgttggtc
      601 aggcactcct gaaccactct ataaatgctg atgtcgacgc tgtcgccgag atcgtcgacg
      661 cgcccatcga ccgcgagccg gcagaacaca tcggcatgcc gttcgttcca accatcgatc
      721 aagttctcga gcgctcgcac caagccgaac tcgtcgagca gcactgggcg cagacggcgc
      781 agcattccgc ggacgacgcc gtacatctgg ttggcgatct gagtgatcgt ggccgccccc
      841 tgatctacgg cgccgcctcc ggtttcctgc gcctgcgcca gtgacgctgc cacggccttg
      901 acggccgcga tcgattgccc gagctcgtcg tgcagctcac gcgccagcac gcgccgctcg
      961 tcctcctgaa tcgcgatcgt ttgctcggcg agatagcggt tctgctcgcg actgcgctcg
     1021 agcacctcgg ccatccgatt gaactgcgtc gcgaccttgc cgagctccgg gagctggaac
     1081 gcgggcaagc gcgatcgata gtcgccctgc tcgatgccat ccatcgccgc aacgatcctc
     1141 tcgaccggcc cgagccatcg cccgatcacg acgtagaaca ggccattcgc gacgacggcc
     1201 acaccgagca cgagcagaag cagcggccag gcgtcgtccc aggactctgc gatctcgtcg
     1261 gcgggatccg ctcgcacgac gacttccgtg ccggcatcga gcgtacgctt gagctccatc
     1321 gccgcgggcg caacgacgct gacgaaccaa cgcggtgcgg ttaccgcttc ggcttcgggg
     1381 cgcgcgagct ccacggcgcg cccgtcatcg atcaacagca cctcgagatg ccgcacgccg
     1441 gcgagcccgc ggagccgttc gcggagccta tcctcgccac ccgtctccgc cgcgatgtcg
     1501 gcactcgggt cggggttccg ggtcgccttg gcgttcgcat acgcgacctc gatcagctgt
     1561 agcgcgagcg cggccgtcga ctcggtctcc tgaagaacgg cgcgccgtgc gttgaagatc
     1621 acgagcaacg taccgagcac
//
LOCUS       DATCUD010000417         1742 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82183, whole genome shotgun sequence.
ACCESSION   DATCUD010000417 DATCUD010000000
VERSION     DATCUD010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1742)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1742
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82183"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1742)
                     /locus_tag="VIQ99_06145"
     CDS             complement(<1..>1742)
                     /locus_tag="VIQ99_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182761.1"
                     /translation="AVLTVQFKVGENRTDALVRLYDTIMSNRDWVSPNLGTGEPIIKP
                     MGIDDVPIVTLALWTADPERGAFELERVAYAAEVELKRVPGTRTVQTTGGPSRAVRVL
                     LDVERMQAYRVTAQDIRQALIAANVSMPAGALVGGNKETLVEAGTFLGSARDVARIVV
                     GSFQNRPVFVEDVAKIVDGPDLPARYVRHGTAAGEFPAVTIAVSKKPGENAVDVADRV
                     IKRVEELKGSIIPEGVEVALTRNYGATANDKAMKLIQKLIFATLSVVALVWAALGRRE
                     AVIVGVAVLLTLAATLFASWAWGFTLNRVSLFALIFSIGILVDDAIVVVENIHRHRAL
                     SNTPLNLMIPLAVDEVGGPTILATFTVIAALLPMAFVTGLMGPYMSPIPINASIGMLI
                     SLAVAFVVTPWLALKLLKRHHAATGHAEEANPRLQRFFERAITPFLRGREGAKARWGL
                     LAAIVALILGSVSLAAFQLVVLKMLPFDNKSEFQVVVDMPTGTALEDTTRVLNEMGAY
                     LATVPEVTDYQVYAGTAAPINFNGLVRQYYLRASPELGDLQVNLVDKHARDRQSHEIA
                     AAARPELRKIAERYG"
BASE COUNT          266 a          615 c          586 g          275 t
ORIGIN      
        1 ccgtaccttt cggcgatctt ccgcagctcg gggcgggccg ccgccgcgat ctcgtgcgac
       61 tggcggtcgc gcgcgtgctt gtcgacgagg ttcacctgca ggtcgccgag ctcggggctc
      121 gcgcgcaggt agtactgcct aaccagtccg ttgaagttga tgggcgcggc ggtgcccgcg
      181 tacacctggt agtcggtgac ctcgggaacg gtggcgaggt acgcacccat ctcgttcagc
      241 acgcgcgtgg tgtcctcgag cgcggtgccg gtgggcatgt cgaccaccac ctggaactcg
      301 ctcttgttgt cgaacggcag catcttcagc acgacgagct ggaacgccgc cagcgacacg
      361 ctgccgagga tcagcgcgac gatcgcggcg agcagccccc agcgcgcctt cgcgccctcg
      421 cggccgcgca ggaagggcgt gatcgcgcgc tcgaagaacc gctgcagccg cggattggcc
      481 tcctcggcgt ggccggtcgc cgcgtgatgt cgcttcagga gcttgagcgc gagccacggc
      541 gtgaccacga acgccacggc gagcgagatc agcatgccga tcgacgcgtt gatcgggatc
      601 gggctcatgt acgggcccat cagcccggtg acgaacgcca tcgggaggag ggccgcgatg
      661 accgtgaacg tcgcgaggat cgtcggcccg cccacctcgt ccaccgcgag cgggatcatc
      721 aggttgagcg gcgtgttcga aagcgcgcgg tggcgatgga tgttctcgac caccacgatc
      781 gcgtcgtcca ccaggatccc gatcgagaag atcagcgcga acagcgacac ccggttcagc
      841 gtgaaacccc acgcccacga ggcgaacagc gtcgcggcga gcgtcagcag caccgccacg
      901 ccgacgatca ccgcctcgcg ccggccgagc gcggcccaca ccagcgcgac gacggacagc
      961 gtggcgaaga tgagcttctg gatgagcttc atcgccttgt cgttcgcggt cgccccgtag
     1021 tttcgcgtga gcgcgacctc cacgccctcg gggatgatcg agcccttcaa ctcctctacc
     1081 cgcttgatca cgcggtcggc gacgtccacg gcgttctcgc ccggcttctt cgagaccgcg
     1141 atcgtgaccg cggggaactc gccagcggcc gtgccgtgtc gcacgtagcg cgcgggcagg
     1201 tcggggccgt cgacgatctt cgccacgtcc tcgacgaaca ccggccggtt ctggaagctg
     1261 ccgacgacga tgcgcgcgac gtcccgcgcc gagccaagga aagtgccggc ctcgaccagc
     1321 gtttccttgt tcccgcccac cagcgctccg gcgggcatcg acacgttggc cgcgatcagc
     1381 gcctggcgga tgtcctgcgc cgtgacgcgg taggcctgca tcctttcgac gtccagcagc
     1441 acgcgcaccg cgcggctcgg tcccccggtc gtctgcacgg tacgcgtgcc gggcacgcgt
     1501 ttcagctcga cctcggccgc atacgcgacg cgctcgagct cgaaggcgcc tcgctcgggg
     1561 tcggcggtcc acagcgcgag cgtcacgatc ggcacgtcgt cgatgcccat cggcttgatg
     1621 atcggctcgc cggtgccgag gttcgggctc acccagtcgc ggttcgacat gatcgtgtcg
     1681 tacagccgca ccagtgcgtc ggtgcggttc tcgccgacct tgaactgcac cgtgagcacc
     1741 gc
//
LOCUS       DATCUD010000418         3222 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_25479, whole genome shotgun sequence.
ACCESSION   DATCUD010000418 DATCUD010000000
VERSION     DATCUD010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3222
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25479"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            139..342
                     /locus_tag="VIQ99_06150"
     CDS             139..342
                     /locus_tag="VIQ99_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182762.1"
                     /translation="MSGKKHQSITLARAGSATILVPVAVLVTPNFCPYRRDWRMPKPE
                     AGRTMTRPGRQPPDYSRWPEEAN"
     gene            356..832
                     /gene="ssb"
                     /locus_tag="VIQ99_06155"
     CDS             356..832
                     /gene="ssb"
                     /locus_tag="VIQ99_06155"
                     /inference="COORDINATES: protein motif:HMM:TIGR00621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEY9182763.1"
                     /translation="MARGVNKVILVGNLGKDPETRYMPSGSAVTNLRLATTESWKDKQ
                     TGDQQERTEWHSVAMFGRLAEIAAEYLRKGSQVYIEGKLRTRKWQDKEGKDRYTTEIV
                     ADEMQMLGSRGGASAGAGAMAGEGGGESRSGGASGGRAAVNDSGGPPGDFDDDIPF"
     gene            833..2182
                     /gene="miaB"
                     /locus_tag="VIQ99_06160"
     CDS             833..2182
                     /gene="miaB"
                     /locus_tag="VIQ99_06160"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041717873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEY9182764.1"
                     /translation="MAERFFIETHGCQMNEYDSAKMADVLGAAFNATPTSVAGEADIV
                     IVNTCSVREKAHEKVFSLLGRWRELKEQNPSLIIGVGGCVASQEGAELLKRAPFVDVV
                     FGPQTLHRLPELIGGVRAGSPRVVDVSFPEIEKFDRIPEPKSSECTAFLSVMEGCSKA
                     CSYCIVPITRGKEISRPLQDVLVEARRLASLGAREITLLGQNVNAYRGVTPNGGKKAD
                     LAALIREVATIDGIERIRFTTSHPAQFTDSLIDAYASVDKLASFLHLPVQSGSDRVLK
                     LMKRGYTAAKYLAKIEKLKLARPGISISTDFIVGYPGETEADFGETLDLIRAVGFDQS
                     FSFIYSPRPGTPAADLTDLPYDVKQKRLERLQALVNEQAAAISQSMVGTVQRILVERT
                     SVKSARELAGRTENQRWVNFIGPPSLVGQFADVVITEPMRNSLRGRLVVGATEKSVA"
     gene            2175..3179
                     /locus_tag="VIQ99_06165"
     CDS             2175..3179
                     /locus_tag="VIQ99_06165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEY9182765.1"
                     /translation="MPDATKPEPSLTVVLTPDDPRRLARVGGQFDEHLRQIERQLGIR
                     ISNRGNRFELVGADSAAERGRRVLEDLFDLAETEELDPERVHLSLAEHMRADLPEGEG
                     GDSNVIHTRRRAVRARGAHQVAYTKAMRECDLTFGIGPAGTGKTYLAVAAAVEALASD
                     AVRRIVLVRPAVEAGERLGFLPGDLTQKVDPYLRPMYDALYEMMGFDKVGRLIERHVI
                     EIAPLAFMRGRTLNESFVILDEAQNTTPEQMKMFLTRIGFGSRAVVTGDITQTDLPRG
                     KESGLKQVGRILRDVPGIAFIYFGAEDVVRHPLVQKIVSAYAREEDSEREQGNGRDPQ
                     "
BASE COUNT          583 a         1042 c         1090 g          507 t
ORIGIN      
        1 ccgctagacc tttctgcagg gtttcattga cgacctgctt gaacggcttg ccggtgcggt
       61 gggccagcgc cttcaacgcc ttggcgatcc ggtcgtcgag cgtcaatgta gttctcatct
      121 aacaagcata gcatcatgat gtccggcaag aagcatcaaa gcatcacact ggcgcgcgcc
      181 ggcagcgcca ccatcctcgt tccggtcgcg gtgctcgtca cgccgaattt ctgcccctat
      241 cgccgcgatt ggcggatgcc aaagcccgag gccgggcgta caatgacccg ccccggcaga
      301 cagccgcccg actattctcg atggcccgaa gaggccaact aaaacaggag cttgcatggc
      361 acgaggcgtg aacaaagtca ttctcgtcgg taacctcggc aaagaccccg agacccgcta
      421 catgccgagc ggcagcgccg tcacgaacct gcgcctcgcg accacggaat catggaagga
      481 caagcagacc ggcgaccagc aggagcggac cgagtggcat tccgtcgcga tgttcggccg
      541 cctcgccgag atcgcggccg agtacttgcg caagggctcg caggtctaca tcgagggcaa
      601 gctccgcacg cggaagtggc aggacaagga aggcaaggac cgttacacga ccgagatcgt
      661 ggccgacgag atgcagatgc tcggcagccg cggcggcgcc tcggccggcg ccggtgcgat
      721 ggccggcgaa ggcggcggtg agagtcgcag cggtggcgcc agcggcggcc gcgcggccgt
      781 caatgactcg ggcggcccgc ccggcgactt cgacgacgac attccgttct aaatggccga
      841 acgcttcttc atcgagactc acggctgcca gatgaacgag tacgactccg ccaagatggc
      901 ggacgtgctc ggcgccgcat tcaacgccac gcccacatca gtggccggcg aggccgacat
      961 cgtgatcgtg aacacgtgct cggtgcgcga gaaggcccac gaaaaggtgt tctcgttgct
     1021 cggccgttgg cgcgagctca aggagcagaa cccgtcgctg atcatcggcg taggagggtg
     1081 cgtcgcgagc caagagggcg ccgagctctt gaagcgcgcg ccgttcgtcg acgtggtgtt
     1141 cggcccgcaa acgctgcacc gcttgcccga gctgatcggc ggcgtgcgtg cggggtcgcc
     1201 gcgcgtcgtc gacgtgtcgt tcccggagat cgagaagttc gacaggatcc ccgagccgaa
     1261 gagctccgag tgcacggcgt tcctgtccgt gatggaaggc tgcagcaagg cgtgctcgta
     1321 ctgcatcgtg ccgatcacgc gcggcaagga gatcagccgg cctcttcagg acgtgctcgt
     1381 cgaggcgcgg cggctcgcct ctctcggcgc gcgcgagatc acgttgctcg gccagaacgt
     1441 gaacgcgtat cgcggtgtca cgccaaatgg cggcaagaag gccgatctcg cggcgttgat
     1501 ccgcgaggtc gcgacgatcg acggcatcga gcgcattcgg ttcacgacgt cgcatcccgc
     1561 gcagttcacg gattcgttga tcgacgcgta cgcgagcgtc gacaagctgg cgagcttcct
     1621 gcaccttccc gtgcagagcg gctcggatcg cgtgctgaag ctcatgaagc gcggctacac
     1681 ggccgcgaaa tacctcgcga agatcgagaa gctgaagctc gcgcggcccg gcatctcgat
     1741 ctcgaccgat ttcatcgtcg gctaccccgg cgagaccgaa gcggacttcg gagagacgct
     1801 ggacttgatc cgtgcggtcg gcttcgacca gtcgttcagc ttcatctaca gcccgcggcc
     1861 cggcacgccg gccgcggatc ttacagacct gccgtacgac gtgaagcaga agcgactgga
     1921 acggctgcag gcgctcgtga acgagcaggc cgccgcgatc agccaaagca tggtcggcac
     1981 ggtgcagcgg attttggtcg agcgaacatc ggtcaagagc gcgcgcgagc tcgcaggccg
     2041 caccgagaac caacgctggg tcaacttcat cggtccgccg tcgttggtcg gccagttcgc
     2101 ggacgtcgtg atcacggagc cgatgcgcaa ttccttgagg ggtcgcctcg ttgtcggtgc
     2161 gacagaaaaa tccgttgcct gacgccacca agcccgaacc gtcgctgacc gtcgtgctga
     2221 cgcccgacga cccgcggcgg ctcgcgcgcg tgggtggtca gttcgacgag cacctccggc
     2281 agatcgagcg gcagctcggc atccgaatca gcaaccgcgg caatcgcttc gagctcgtcg
     2341 gcgccgactc ggcggccgag cgcggccggc gcgtgctcga ggatctgttc gatctcgccg
     2401 agaccgagga gctcgatccc gagcgcgtgc acttgtcgct ggccgagcac atgcgcgccg
     2461 acttgcccga gggcgagggc ggcgacagca acgtgatcca cacgcgccgg cgcgctgtgc
     2521 gcgcgcgcgg cgcgcatcag gtcgcgtaca cgaaagcgat gcgcgagtgc gacctcacgt
     2581 tcggcatcgg ccccgcgggc accggcaaga cgtatctggc cgtcgcggcc gcggttgagg
     2641 cgctcgcgag cgacgcggtg cgccgcatcg tgctcgtgcg gccggccgtg gaggccggcg
     2701 agcggctcgg cttcttgccc ggcgatctca cgcagaaggt cgacccgtat ttgcggccga
     2761 tgtacgacgc gctttacgag atgatgggct tcgacaaggt cgggcgtttg atcgagcgcc
     2821 acgtgatcga gatcgcgccg cttgcgttca tgcggggacg cacgttgaac gagtcgttcg
     2881 tgattctcga cgaagcgcag aacacgacgc cggagcagat gaagatgttc ctgacgcgaa
     2941 tcggcttcgg ctcgcgcgct gtcgtcaccg gcgacatcac gcagacggac ttgccgcgcg
     3001 gcaaggagtc gggcctgaag caggtcggcc gcatcctgcg cgacgtgccc ggcattgcgt
     3061 tcatctattt cggcgcggaa gacgtcgtgc gccatccgct cgtgcagaag atcgtgtcgg
     3121 cctacgcgcg cgaggaagac tcggagcgcg agcaaggcaa cggccgagac ccgcaatgac
     3181 gcggcgcgcg cgcacggtcg tcgtgactgt gcaaaacgcc gc
//
LOCUS       DATCUD010000419         1756 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96540, whole genome shotgun sequence.
ACCESSION   DATCUD010000419 DATCUD010000000
VERSION     DATCUD010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96540"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VIQ99_06170"
     CDS             complement(<1..582)
                     /locus_tag="VIQ99_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010337697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class III extradiol dioxygenase subunit beta"
                     /protein_id="HEY9182766.1"
                     /translation="MARIIAGIGTSHTPAIGAAVDNGKTNEPYWIPVFKGYEASKKWM
                     AETKPDVAIVVYNDHVNAFDFKIIPTFGLGCAAEFPIADEGWGARPVPIVKGYPELAA
                     HMVQSLVLDEFDMTIVNEMQLDHGLTVPLTLLFGQPRAWPVRVIPLSVNVVQYPAPTG
                     HRCYALGKAIRKAVESWDEDLNVVIFGTGGMSHQ"
     gene            complement(582..989)
                     /gene="ligA"
                     /locus_tag="VIQ99_06175"
     CDS             complement(582..989)
                     /gene="ligA"
                     /locus_tag="VIQ99_06175"
                     /EC_number="1.13.11.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018082715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018579 - protocatechuate 4,5-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 4,5-dioxygenase subunit alpha"
                     /protein_id="HEY9182767.1"
                     /translation="MIALMSTQPEDYEDIPGTWVFDAERARKGYHLNAFFYSLMKAEN
                     RAEFLADERKYLQKFPMTEAQRDAVMKRAWNKLLELGGVSYAIVKLAFTDKKSYQYMA
                     SQMVGVTEKEYVEMMQAGGRSLDGWRSKAERKD"
     gene            complement(1010..>1756)
                     /locus_tag="VIQ99_06180"
     CDS             complement(1010..>1756)
                     /locus_tag="VIQ99_06180"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9182768.1"
                     /translation="REATFGVRSTADLNAIVVELERDRPVRIDDQGTVHATDPLGFAI
                     AFRVRRSTPITAPELKFNTPGRPDRINTRGQFFKSATPLEMTHTVFMIDEPDKVLPFY
                     TQRLGFIVSDSYPGRAYFLRGSASNHHHDLFLLNVGQKRGFHHLAFELGSIHELFGGG
                     LNMTRRGWKTALGPGRHPISSCYFWYFHSPCGGAAEYDFDSDLVDDRWIPGEHPQTPE
                     MFAEWCLAEGLAESLLYKGVQTANTIKSKS"
BASE COUNT          308 a          555 c          538 g          355 t
ORIGIN      
        1 ctggtgcgac atcccgccgg tgccgaatat cacgacgttc aggtcctcgt cccagctctc
       61 gacggccttc ctgatggctt tgccgagcgc gtagcaccga tgacccgtcg gcgcgggata
      121 ctggacgacg ttcacggaca gcggaatcac gcgcacgggc caagctctgg gctgaccgaa
      181 cagcagcgtc agcggcacgg tgagcccgtg gtcgagctgc atctcgttca cgatcgtcat
      241 gtcgaactcg tcgagcacca gcgactgcac catatgagcc gcgagctcag gatacccttt
      301 cacgatgggc acggggcgcg cgccccagcc ttcgtcggcg atcggaaatt ccgcggcgca
      361 accgagcccg aaggtcggaa tgatcttgaa atcgaatgcg ttgacgtggt cgttgtagac
      421 gacgatcgcg acatccggtt tggtttccgc catccacttc ttggacgcct cgtagccctt
      481 gaacactggt atccagtagg gctcgttcgt cttaccgttg tcgacggccg ccccgatcgc
      541 gggcgtatgc gacgtgccga tgccggcgat gatccttgcc atcagtcctt cctctcggct
      601 ttcgaccgcc agccgtccag cgatcgtccg ccagcctgca tcatctctac gtattccttt
      661 tccgtcacac cgaccatttg cgacgccatg tactgatacg atttcttgtc cgtgaacgcg
      721 agcttgacga tcgcgtacga gacgccgccg agctcgagca acttgttcca agcccgcttc
      781 atgaccgcgt cgcgctgtgc ctcggtcatc ggaaacttct gtagatactt gcgctcgtcg
      841 gccaggaact ctgcgcgatt ctccgccttc atcagcgaat agaagaacgc gttgagatgg
      901 tagcccttgc gtgcgcgttc ggcgtcgaac acccacgtgc ccgggatgtc ctcgtagtct
      961 tcgggttgcg tgctcatgag ggcgatcaaa ccgtcccgct ccgcttaagt caactcttgc
     1021 ttttgatcgt gtttgcggtt tgcacgccct tgtagagcaa agactcggcc aatccttcgg
     1081 cgaggcacca ttcggcgaac atttccggtg tctgtgggtg ctcgcccgga atccaacggt
     1141 cgtcgacgag atcggagtcg aagtcgtact cggccgcgcc gccgcagggc gagtgaaagt
     1201 accagaagta gcaggacgag atcgggtggc ggcccggtcc gagcgcggtc ttccagccgc
     1261 gtcgagtcat gttcagaccg ccgccgaaca actcgtgaat gctgccaagc tcgaacgcga
     1321 ggtgatggaa accgcgcttc tgcccgacgt tcagcaggaa cagatcgtga tggtggttcg
     1381 acgcgctgcc gcgcaggaag taggcgcgcc ccggataact gtcgctgacg atgaagccga
     1441 gccgctgtgt gtagaacggc aggaccttgt cgggctcgtc gatcatgaac accgtgtgcg
     1501 tcatctcgag cggcgtcgcc gacttgaaga actgaccgcg agtgttgatc cgatcgggcc
     1561 tgcccggcgt gttgaacttg agctcgggcg ccgtgatcgg cgtgctgcgc cggacccgga
     1621 acgcgatcgc gaagccgagc ggatcggtcg cgtgcacggt gccctggtcg tcgatgcgca
     1681 cgggccggtc acgctcgagc tcgaccacga tggcgttcaa gtccgccgtc gatcgcacgc
     1741 cgaacgtcgc ttcgcg
//
LOCUS       DATCUD010000420         2441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96541, whole genome shotgun sequence.
ACCESSION   DATCUD010000420 DATCUD010000000
VERSION     DATCUD010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96541"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(55..130)
                     /locus_tag="VIQ99_06185"
     tRNA            complement(55..130)
                     /locus_tag="VIQ99_06185"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(94..96),aa:Glu,seq:ctc)
     gene            202..1527
                     /gene="pcnB"
                     /locus_tag="VIQ99_06190"
     CDS             202..1527
                     /gene="pcnB"
                     /locus_tag="VIQ99_06190"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:1990817 - poly(A) RNA polymerase activity
                     [Evidence IEA];
                     GO_process: GO:0006378 - mRNA polyadenylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEY9182769.1"
                     /translation="MNDTDLESRRGLVIVPRAEHNVSRANISPNALKVLYRLKSAGFE
                     AFLVGGGVRDLLLDRHPKDFDVVTNADPDQIQELFRNCRLIGRRFRLAHVRFGRDIVE
                     VATFRAAGAEPDDDDRAHSDSGRILRDNVYGTIHEDVWRRDFTVNALYYNITDFSIWD
                     YVRGVEDVRARTLRLIGDPEKRYREDPVRLLRAMRFAAKLDFALAPETAAPIATVGRL
                     LADVPPARLFDELLKLFLSGHAVRSFDLLIQYDLLRFLFRDTAELLDTNDREQIAGFI
                     RRGLEDTDERIRGDKPVTPMFLYALFLWFPIRALARRLESEGWNAGQAMLEASQRIVA
                     TQQTAFPRRFSSPMKELLNMQWRFDERHGGRALRLLDHKRFRAAYDFLMLRAGCGEVD
                     RETASWWTDIQAMPLEERNKLLNAKRQGRRRRGGRGRRARQREIGDVVV"
     gene            1643..2272
                     /locus_tag="VIQ99_06195"
     CDS             1643..2272
                     /locus_tag="VIQ99_06195"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019136 - deoxynucleoside kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HEY9182770.1"
                     /translation="MVIEGPIGVGKTSLAKRLAASFASELILERAEENPFLESFYRNR
                     GQSALPTQLFFLFQRARQIEQIRQSDMFSPVRIADFLLQKDRLFAELNLDAHELGLYS
                     QVADTLDLDPPTPDLVVYLQAPAQVLLKRVAARGIPYEQLIEPDYLERLGEAYARFFY
                     DFDAAPLLIVNAAAIDPIHRESDYQELLQTILRIRHGRHFFNPAGAALT"
BASE COUNT          442 a          765 c          779 g          455 t
ORIGIN      
        1 cgagtcgggc gtagcggccg cgcgcgccgc gcttagtcga cgcgctgccc ggtatggcgc
       61 tccctacggg aatcgaaccc gtgttttagc cttgagaggg ccacgtcctg gaccgctaga
      121 cgaagggagc gcggctgccg cgcgttcagc gaggctgtta tgataccggt ctttctcgca
      181 cggcgaaacc acggcagctt gttgaacgac acggatctag agtcgcgccg cggcctcgtc
      241 atcgtcccgc gcgcagagca caacgtcagc cgggccaata tctcgcccaa cgccctcaaa
      301 gttctgtacc gcttaaagag cgcgggcttc gaggcctttc tcgttggcgg cggagttcgc
      361 gacttgctgc tggaccgaca tccgaaagac ttcgacgtcg tcacgaatgc cgaccctgat
      421 cagattcaag agctgtttcg aaactgccgg ttgatcggcc gacgattccg gctcgcgcac
      481 gtcaggtttg ggcgcgacat cgtcgaagtc gcgacgttcc gcgcagccgg tgcggagccc
      541 gacgatgacg atcgtgcgca ctccgatagc ggccgaatcc tgcgcgacaa cgtctacggc
      601 acgatccacg aagacgtctg gcgacgcgac ttcacggtca acgcactgta ttacaacatc
      661 accgacttca gcatctggga ttacgtccgt ggcgtcgagg acgtgcgcgc ccggacgctg
      721 cgcctgatcg gcgaccccga gaagcggtat cgtgaagacc cggttaggtt gttgagggca
      781 atgcgctttg cggccaagct cgatttcgcg cttgcgcccg agaccgcagc gccgatcgca
      841 acggtggggc gattgctcgc cgacgtgccg ccggcgcggt tgttcgatga gttgctgaag
      901 ctgttcttga gcggccacgc cgtgcgcagc ttcgatctgc tcatccaata cgacttgttg
      961 cgattcttgt tccgagacac cgccgagctg ctcgatacga atgaccgcga gcagattgcg
     1021 ggattcatcc ggcgcggtct cgaagacacg gacgagagaa ttcgcggcga caagccggtc
     1081 acgccgatgt tcctgtatgc actgttcctg tggttcccga ttcgtgctct ggcgcgcagg
     1141 ctcgagagcg agggttggaa cgcggggcag gcaatgctcg aggcgagcca gcgaatcgtc
     1201 gctacacagc aaacggcgtt cccgcggcgc ttcagctcgc ctatgaagga gctgttgaac
     1261 atgcaatggc ggttcgacga acggcacggc ggccgcgcgc tgcgtttgct cgatcacaag
     1321 aggttccgcg ccgcctacga tttcttgatg ttgcgcgccg gttgcggcga agtggatcga
     1381 gagactgcat cctggtggac cgatatccaa gcgatgccgc tcgaagagcg caacaagctc
     1441 ctcaacgcaa agcgccaagg ccggcggcgg cgaggcggtc ggggtcgccg cgcacgccag
     1501 cgcgagatcg gcgacgttgt cgtttagctt ggcaaaggga ccgcgcacga agccggagcc
     1561 gggatctccc gcccgaccgg ccacgaaggg tgccgctacg gatcgtcccg gcgaggcgac
     1621 tcggctcgat ggcccccgtt acatcgtgat cgaaggcccg atcggcgtcg gcaagacgag
     1681 cctggcgaag cgcttggcgg caagcttcgc gagcgagctg attctggagc gggccgaaga
     1741 gaatccgttt ctcgaaagct tttatcgcaa tcgcggccag tcggccttgc cgacccagtt
     1801 gttcttcctg ttccagcgcg cgcgacagat cgagcagatt cgtcagagcg acatgttctc
     1861 gccggtgcgt attgcggact tcttgttgca gaaggaccgc ttgttcgccg agctgaacct
     1921 cgacgctcat gagcttgggc tctacagcca agtggccgac acgctcgacc tcgatccgcc
     1981 gacgccggat ctcgtcgtct acctgcaggc gcccgcgcag gtgctgttga agcgagtcgc
     2041 cgctcgcggc attccgtacg agcaactgat cgagcccgat tatctcgaaa ggctcggaga
     2101 ggcttatgcg cgtttcttct acgatttcga tgcggctcct ctcctgatcg tcaacgcggc
     2161 ggccattgac ccgattcacc gcgaatccga ctatcaggaa ttgttgcaga cgatcctacg
     2221 tatcaggcac gggcgacact tcttcaaccc ggccggcgct gccctgacct gagcggggcg
     2281 gtcggaggtc gacatgtaca agcaacttca gcagcgcggc atggactctc cgcccgtgaa
     2341 cgtaggcgcg ctgcgcgaca tgaagcaggc acgcgagccg atcgcgtgcc tgacggccta
     2401 cgacgcgagc ttcgccgagc tcgtggatct cgccggtacc g
//
LOCUS       DATCUD010000421         1621 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53826, whole genome shotgun sequence.
ACCESSION   DATCUD010000421 DATCUD010000000
VERSION     DATCUD010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53826"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..740
                     /locus_tag="VIQ99_06200"
     CDS             <1..740
                     /locus_tag="VIQ99_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY9182771.1"
                     /translation="ASLALAWLGFRLVRRPADWRRTYGFDRFAVLVAFVNGLALFAIA
                     AWIVTEAAERLYAPVDVLGYPMLWIALTGLVVNIVAFLVLRGGDKDNLNIRAAVLHVI
                     GDLLGSVAAVVAALVILATGWMPIDPLLSIAVALIILRSAWRVVADSGHILLEGSPPG
                     VDTRALREQLCAALPFVLDVHHVHAWSISQERPMVTLHASIAVGTDSAAAVREIKRTL
                     AQQFLITHATIEIEYDACGDEPGRPPC"
     gene            complement(758..>1621)
                     /locus_tag="VIQ99_06205"
     CDS             complement(758..>1621)
                     /locus_tag="VIQ99_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004337725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HEY9182772.1"
                     /translation="GCRIYTFVTTLRYVLEEAARHGKSVWVLDRPNPVGRPVEGLRLR
                     PGFESFVGAGPLPMRHGLTMGELARWFVATFGIDVDCRVVEMSGWKPAAAPGYGWPLG
                     ERSWINPSPNVPRLSSARCYPGTVMVEGTTLSEGRGTTRPFELVGAPDVDTAALITKM
                     HELAPQWLRGCALRACWFEPTFHKHVGKLCAGVQIHADVDHDHARFQPWRLQALMFKA
                     LRKLEPKYPLWRDFPYEYESGRPAIDVINGSDLLRRWVDDPRSTPRDLEDLASADERT
                     WRRERRAFLLY"
BASE COUNT          234 a          580 c          544 g          263 t
ORIGIN      
        1 tcgcgagctt ggcgctcgcc tggctcggct tcaggctcgt ccgccggccg gcagattggc
       61 ggcgcaccta cggattcgac cgattcgccg tcctcgtggc cttcgtgaac ggcctcgcgc
      121 tgttcgcgat cgcggcttgg atcgtcaccg aagccgcaga gcggctgtac gcgcccgtcg
      181 acgtgctcgg ttacccgatg ctgtggatcg cgctcacggg cctcgtcgtc aacatcgtcg
      241 cgttcttggt gctgcgcggc ggcgacaagg acaacctgaa catccgggct gcggtgctgc
      301 atgtgatcgg cgacctgctc ggctccgtgg ccgccgtcgt cgccgcgctc gtgatcctcg
      361 caaccggctg gatgccgatc gatccgctgc tgtcgatcgc cgtggcgttg atcatcctgc
      421 gctcggcctg gcgcgtcgtg gccgacagcg ggcacatcct gctcgagggc tcgccgccgg
      481 gcgtcgacac gcgcgcgctg cgtgagcagc tgtgcgcggc actgccgttc gtgctcgacg
      541 tgcatcacgt gcatgcgtgg tcgatcagcc aggagcgacc gatggtcacg ctgcacgcga
      601 gcatcgcggt gggcacggac tccgccgcgg ccgtccgcga gatcaaacgc accctcgcac
      661 aacagttcct gatcacgcac gcgacgatcg agatcgagta cgacgcctgc ggcgacgagc
      721 ccgggcgtcc gccctgctga gcgccggcgc cgccgtctca gtagagcagg aacgcgcggc
      781 gctcgcggcg ccacgtgcgc tcgtcggcgg acgcgagatc ctcgagatcc ctcggcgtgc
      841 tgcgcgggtc gtcgacccag cgccgtagga ggtcgctgcc gttgatcacg tcgatggcgg
      901 ggcggccgct ctcgtactcg tacgggaagt cgcgccagag cggatacttc ggctcgagct
      961 tccgcagcgc tttgaacatc agcgcttgga ggcgccatgg ctgaaacctt gcgtggtcgt
     1021 ggtcgacgtc ggcgtgaatc tggacgccgg cacagagctt cccgacgtgc ttgtggaacg
     1081 tcggctcgaa ccagcacgcg cgcaacgcgc agccgcggag ccactgcggc gccagctcgt
     1141 gcatcttcgt gatcagcgct gccgtgtcga cgtcgggcgc accgaccagc tcgaacggcc
     1201 gagtcgtgcc ccggccttcc gacaatgtcg tgccctccac catcaccgtg ccgggatagc
     1261 agcgcgccga cgacagccgc ggcacgttcg ggctcggatt gatccagctg cgctccccga
     1321 gcggccaacc gtaacccggg gcggcggcgg gcttccagcc gctcatctcg accacgcggc
     1381 aatccacgtc gatcccgaac gtcgcgacga accagcgcgc gagctcgccc atcgtgagcc
     1441 cgtgacgcat cggcagcggt cccgcgccga cgaagctctc gaagcccggg cgcaaccgca
     1501 gcccctcgac gggccggccg acgggattcg gccggtcgag cacccacact gatttgccat
     1561 ggcgcgccgc ttcttcgagc acgtaacgca gcgtcgtcac gaacgtgtag attcggcagc
     1621 c
//
LOCUS       DATCUD010000422         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82223, whole genome shotgun sequence.
ACCESSION   DATCUD010000422 DATCUD010000000
VERSION     DATCUD010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82223"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VIQ99_06210"
     CDS             <1..460
                     /locus_tag="VIQ99_06210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182773.1"
                     /translation="LYNRGMKALAPAAALGAVLAAGCTTSDSEAEIRALLAGAAEAAE
                     ARDVGFFADVIGDAYRDARGNDREQLLLAIRGYFIANQRIDVASRIDEVVLEGTDAAR
                     AVVHAGLLGRSGAALSDGVDAGLYRFDLELVNDDGEWQIIGAKWARALGE"
     gene            462..935
                     /locus_tag="VIQ99_06215"
     CDS             462..935
                     /locus_tag="VIQ99_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182774.1"
                     /translation="MRMVSAFFLLAVFGGAQLGCTAPSRDFVRPAITVQNVVALSGGA
                     GQPRFRVTLRVDNLNTKPLPVYSLEFKLRLADQGIIDGTLPGSTTIQPLDQLTTTLDL
                     SSDIVSSLSRLMSFVQGPNNLLPYEIYGTLRMDRTVRDPIAFTYRGETPISMTTQ"
     gene            948..>1535
                     /locus_tag="VIQ99_06220"
     CDS             948..>1535
                     /locus_tag="VIQ99_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182775.1"
                     /translation="MSLRLQLLAVGLLTLVLPWTGFHYVQEMEAALRAGLEQSLLGSA
                     STVAAALEEQGAALCIPPQCVAQRPGLTIYATTLAQEPELDGARDDVWGLAVEAGGPI
                     GAEPPQGAGHRLGAGVYGRFLYLYVSAADRDLVYQRLPGQTPYGDRVVLATERAGGEP
                     HWWLLNTAAPGAFRAQETGPEKFEPSEVYDARIIGA"
BASE COUNT          234 a          495 c          538 g          268 t
ORIGIN      
        1 gctctacaat cgcggcatga aagctctcgc acccgcagcg gccctcggtg cagtgctcgc
       61 cgcggggtgc acgaccagcg attccgaggc cgagatccgc gcattgctcg ccggggccgc
      121 ggaggccgcc gaagcccgcg acgtcggatt tttcgccgac gtgatcgggg atgcctaccg
      181 tgacgctcgc ggcaacgacc gcgagcaact gttgctcgcg atccgcggct atttcattgc
      241 aaaccaacgc atcgacgtcg cgagccgaat cgacgaggtc gtcctcgagg gcaccgatgc
      301 cgcgcgcgca gtcgttcacg cgggtttatt gggacggtcg ggtgcggcgc tctcggacgg
      361 cgtcgacgcc gggctctatc gcttcgacct cgagctcgtc aacgacgacg gcgagtggca
      421 gatcattggc gcaaagtggg ctagggcctt gggagagtga gatgcgaatg gtgtcggcgt
      481 tttttctgtt ggcggtcttc ggtggcgcgc agctcgggtg taccgcgccc tcgcgtgact
      541 tcgtccggcc ggccattacg gttcagaacg tcgtcgcgtt gtccggcggc gccggccagc
      601 cgcggtttcg cgtgacgctc cgggtcgaca acctgaacac gaagccgttg ccggtctatt
      661 cgctcgaatt caagctgcga ctcgccgatc aagggatcat cgacggcacg ctgccgggct
      721 cgacgacgat ccagccgctc gaccagctca cgaccacgct cgatctgtcg agcgacatcg
      781 tctcgtcgct gtcgcggttg atgtcgttcg tgcaaggacc gaacaatctg ttgccgtacg
      841 agatctacgg cacgctgcgg atggatcgca cggtgcgcga tccgattgcg ttcacctacc
      901 ggggcgagac gccgatctcg atgactaccc agtaaggacg ggccgccgtg tcgctgcggc
      961 tgcagttgct cgcggtcggg ttgctgaccc tggtgctgcc gtggacgggg ttccactacg
     1021 ttcaggagat ggaagccgcg ctgcgcgccg ggctcgagca atcgctgctc ggcagcgcga
     1081 gcacagtcgc ggccgcgctc gaggagcaag gcgccgcgct gtgcattccg ccgcaatgcg
     1141 tcgcgcagcg cccgggcctc acgatctacg cgacgacgct cgcgcaggag cccgagctcg
     1201 acggtgctcg cgatgacgtg tgggggctcg cggtcgaggc gggtgggccg atcggcgccg
     1261 agccgccgca gggtgcgggg catcgactcg gtgcgggcgt gtatggccgc ttcctgtacc
     1321 tgtacgtatc ggccgctgat cgcgacctcg tctaccaacg gctgccggga caaacaccgt
     1381 acggtgatcg cgtcgtgctc gcgaccgagc gcgcgggcgg tgagccgcat tggtggctgc
     1441 tgaacaccgc ggcacccggc gcatttcgcg cgcaggagac ggggcccgag aagttcgagc
     1501 cgagcgaagt ttacgacgcg cggatcatcg gcgct
//
LOCUS       DATCUD010000423         2572 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75196, whole genome shotgun sequence.
ACCESSION   DATCUD010000423 DATCUD010000000
VERSION     DATCUD010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75196"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..776
                     /locus_tag="VIQ99_06225"
     CDS             99..776
                     /locus_tag="VIQ99_06225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020717671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182776.1"
                     /translation="MIRLQGVEKSYPYKGGQTWVLRQIGVEIAEGDFVTIMGPSGSGK
                     STLLAILGMLDGEYSGEYWFDDKPVHKASVKQRAALNKENVGFVFQHFHLLDDLTVYE
                     NLDIPLSYRDVPRKEREARVAEILDRFQMVGKKDLYPTQLSGGQQQQVAVARAVIANP
                     RVVLADEPTGSLHWSQGEEIMKLLKGLNENGTTIVQVSHDERVAAFGHRVIELGDGWI
                     SADRKVA"
     gene            787..2139
                     /locus_tag="VIQ99_06230"
     CDS             787..2139
                     /locus_tag="VIQ99_06230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011685886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY9182777.1"
                     /translation="MSRTARILIADDQHDVLESLRLLLKGEGYTAETFDTPEALVRAL
                     RSRAADAVLMDLNYSRDTTSGEEGLDTIARIRAFDAYTPIVVMTAWGSIELAVEAMRR
                     GSQDFIEKPWDNDRLLTVLRTQVALGQSLQRMRALEAENRQLTGADAELVAGSQVMQP
                     VLEAIERVAPSDANVLITGESGCGKGLVARMIHSRSMRRERSLVVVNIGSLSETVFES
                     EMFGHVKGAFTDAKADRIGRFELADGGTLFLDEIANIPVAQQARLLRVLEGGEFERLG
                     SSRTQQVDVRVLAATNANLQAEIDAGRFRADLLYRLNTIQIELPPLRERGDDIVRLGQ
                     RFLELHAKRHRRPVEAFTDAALSALRRYRWPGNVRELSHVVERAVLMARGATLGPADL
                     HLDGAPVRQELPPMTLDAIEKEAIVAGLARHDGNVATAADELGVSRSALYRRMEKFGL
                     "
     gene            2136..>2572
                     /locus_tag="VIQ99_06235"
     CDS             2136..>2572
                     /locus_tag="VIQ99_06235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY9182778.1"
                     /translation="MKRRRRLRFQNRVLLLVLIAVGPAWVASAWFLWASESAPALRWT
                     VFVLITLFVVIGLVAVRRRVVRPLQSLANMLEALREGDYSLRARHVDPEDAFGEVMIE
                     VNTLSRTLYDQRLEALEAGVLLQKIIADVDIAVFAFDAQLRLRL"
BASE COUNT          432 a          833 c          894 g          413 t
ORIGIN      
        1 gggccgacgc ggcctaaaac ccagccggca cagtggctta gcgtttggca cgggagttgc
       61 ctttccggct accaaccact ctgaataggg gcgagcgaat gatccggcta caaggcgtcg
      121 agaagtccta cccgtacaag ggcgggcaga cctgggtcct ccggcagatc ggcgtcgaga
      181 tcgcggaagg cgacttcgtg acgatcatgg gcccgtcggg ctcgggcaag tcgacgctgc
      241 tcgcgatctt ggggatgctc gacggcgagt acagcggcga gtactggttc gacgacaagc
      301 cggtgcacaa agcgagcgtg aagcaacgcg ccgcgttgaa caaagagaac gtcggcttcg
      361 tttttcagca cttccatctg ctcgacgacc tgaccgttta cgagaacctc gacatcccgc
      421 tgtcgtatcg cgacgtgccg cgcaaggagc gtgaagcgcg cgtcgccgag atcctcgatc
      481 gcttccagat ggtcggcaag aaggatctgt atccgacgca gctctcgggc ggccagcaac
      541 agcaggtcgc cgtcgcgcgt gccgtgatcg cgaacccgcg cgtcgtgctc gccgacgagc
      601 cgaccggcag cctgcactgg agccagggcg aggagatcat gaagctgcta aaggggttga
      661 acgagaacgg cacgacgatc gtccaggtgt cgcacgacga gcgcgtcgcc gcgttcggcc
      721 atcgcgtgat cgaactcggc gacggttgga tcagcgcgga ccgcaaggtc gcctgacggc
      781 cgaccgatga gccgcactgc ccgcattctg atagccgacg atcagcacga cgtgctcgag
      841 tcgctgcgcc tgctcctgaa gggcgaggga tacacggctg aaacgttcga cacgcccgaa
      901 gcgctcgtgc gcgcgctgcg ctcgcgcgcg gccgacgcgg tgctgatgga cctgaactac
      961 tcgcgcgata cgacgtcggg cgaggaaggc ctggacacga tcgcacggat acgcgcgttc
     1021 gacgcctaca ccccgatcgt tgtgatgacg gcatggggca gcatcgagct cgcggtcgag
     1081 gcgatgcgcc gcgggtccca ggacttcatc gagaagccgt gggacaacga tcgcctgctc
     1141 acggtgctgc ggacgcaggt tgcgctcggc cagtcgctgc agcgcatgcg cgcgctcgag
     1201 gccgagaacc gccagctcac gggtgcggac gcggagctcg tggcgggatc ccaagtcatg
     1261 cagcccgtgc tcgaggcgat cgagcgcgtc gcaccgtcgg acgcgaacgt gctgatcaca
     1321 ggcgaaagcg gctgcggcaa aggtctcgtc gcgcggatga tccacagccg ctcgatgcgg
     1381 cgcgagcgga gcctcgtggt cgtgaacatc ggcagcctgt ccgagaccgt gttcgagagc
     1441 gagatgtttg gccacgtgaa gggcgcgttc acggacgcca aggccgatcg catcggccgc
     1501 ttcgagctcg ccgacggcgg cacgttgttc ctcgacgaga tcgcgaacat tccggtcgcg
     1561 cagcaggcgc gcttgctgcg cgtgctcgaa ggcggcgagt tcgagcggct cggctcgtcg
     1621 cgcactcagc aagtcgacgt gcgcgtgctc gcggccacga acgccaacct gcaggccgag
     1681 atcgacgctg ggcgattccg cgccgatctg ctgtatcgat tgaacacgat ccagatcgag
     1741 ctgccgccgc tgcgcgagcg tggcgacgac atcgtccggc tcggccagcg ctttctcgag
     1801 ctgcacgcga agcggcaccg ccgccccgtg gaagcgttca ccgacgccgc gttgtccgca
     1861 ttgcgccgct accgttggcc cggcaacgtc cgcgagctgt cccacgtcgt ggagcgcgcc
     1921 gtgctgatgg cacgcggcgc gacgctgggc ccggccgacc tgcacctgga cggtgcgccg
     1981 gttcgccagg agctaccgcc gatgacgctc gatgcgatcg agaaggaagc gatcgtcgcg
     2041 gggttggcgc gccacgacgg caacgtcgcg acggctgccg atgagctcgg ggtcagccgt
     2101 tccgctctgt atcgccgcat ggaaaaattc ggcctgtgaa gcgccgccgg cgactccggt
     2161 tccagaatcg agttctgttg ctcgtgctga tcgcggtagg gccggcatgg gtcgccagcg
     2221 catggttcct gtgggcgtcg gagtccgcgc ccgcgctgcg ctggacggtg ttcgtgctga
     2281 tcacgctgtt cgtcgtcatc ggcctcgtgg ccgtgcgccg gcgcgtcgtg cggccgttgc
     2341 agtcgctcgc gaacatgctc gaggcgctgc gcgaaggcga ctactcgctg cgcgcgcgcc
     2401 acgtcgatcc cgaggacgcg ttcggcgagg tcatgatcga ggtcaacacg ctgagccgca
     2461 cgctgtacga ccagcgcctc gaggcgctcg aggccggcgt gctgctgcaa aagatcatcg
     2521 ccgacgtcga catcgccgtg ttcgcgtttg acgcgcagct gcgcttgcgg ct
//
LOCUS       DATCUD010000424         2837 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82256, whole genome shotgun sequence.
ACCESSION   DATCUD010000424 DATCUD010000000
VERSION     DATCUD010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82256"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1097
                     /locus_tag="VIQ99_06240"
     CDS             <1..1097
                     /locus_tag="VIQ99_06240"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9182779.1"
                     /translation="MQLDLSRFRGARVDPASRVAYVAGGSLLGDLDHESMAYGLVTTA
                     GTVSHTGVGGLTLGGGFGRVARRFGLSLDNVRAVDIVTAGGEILRASAEENSELYWGV
                     RGGGGNFGVVTSFDFALHPMQREVIGGLIIFPLEQAKQVLHFYSEYAATAPDELYLSC
                     GVQAGPEGTGVGFIICYSGPANRWDGIARTLRSVGTPILDQVSAIDYVALQKSGDISE
                     SRALGLYTKTGFIPSLPPALIDAIVDGFEAHPERATMMGFQHSGGAIARVAGDATSFP
                     HRQIVATMLLNSEWDAAVNQAPHIDWLRQYWRSLEPHTRGFYTNDAIEESQQQIDDNY
                     AGNLPRLVALKNRFDPTNLFRLNANIVPTV"
     gene            complement(1130..1516)
                     /locus_tag="VIQ99_06245"
     CDS             complement(1130..1516)
                     /locus_tag="VIQ99_06245"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182780.1"
                     /translation="MGRAKFWPFASAAVALLGFAGLSAAHHPPRFERCQRFTFTGQLE
                     KIEWTNPHVLLSVQTDDGVSRRVGWLNIQGLRRAGIGVDTLRIGDRLRIEGGIRKKDS
                     GKEPILLSSIRRLSDEWEWSQPLRGC"
     gene            1767..2777
                     /locus_tag="VIQ99_06250"
     CDS             1767..2777
                     /locus_tag="VIQ99_06250"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004061 - arylformamidase activity
                     [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY9182781.1"
                     /translation="MIDSLKFCLMLLAALGVAQPLAAQTRERGPWWPSVHGPEDQAGA
                     SNYVTPAKTLAALAIPKTGQTYELGHPYETSMPQYGSRPYFLSVLTRAATRAPGDPLV
                     HTEYFTGYIGQMGTQFDALSHQGRHVRMADGSVEAVFYNGFTDTELMGRTNGLGGVTA
                     LGVEQMKPYITRGVLIDIAGFKQVPTLPAAYEVTMADVRGALARQQMSETSIEQGDAV
                     LFNYGWAVNWTNPSKYNDSFIGTGENQGSPGIGAEVANWLIERKVGLVGGDSCCVEVR
                     GPVPKESVHHLLFLGHGIPLLENLDLAELARDEASEFLFLGLPERIKGATGAPIRPIA
                     VR"
BASE COUNT          504 a          931 c          913 g          489 t
ORIGIN      
        1 ggatgcagct cgacctctcg cgcttccgcg gtgcacgcgt cgacccggcg tcacgcgtcg
       61 cctacgtcgc cggcggcagc ctgctcggcg atctcgacca cgagagcatg gcctacggtc
      121 tcgtgacgac ggccggcacg gtctcgcaca cgggggtcgg cgggctcacg ctcggcggcg
      181 gcttcggccg cgtcgcacgc cgcttcggcc tgtcgctcga caacgtgcgg gccgtggaca
      241 tcgtcacggc cggcggcgag atcctgcgcg cgagcgccga ggagaactcg gagctctact
      301 ggggcgtgcg cggcggtggc ggcaatttcg gagtggtgac atcgttcgac ttcgcgctgc
      361 acccgatgca gcgcgaagtc atcggcggcc tgattatttt ccccctcgag caggcgaagc
      421 aggtgctgca cttctattcg gagtacgcgg cgacggcgcc ggacgagctc tacttgagct
      481 gcggcgtgca agcggggccg gagggcacgg gcgtgggctt catcatctgc tacagcggcc
      541 cggcgaaccg ctgggatggc attgcacgca cgctgcgcag cgtcggcacg ccgatcctcg
      601 accaggtgag cgcaatcgac tacgtcgcgc tgcagaagtc cggcgacatt tcggagagcc
      661 gcgcgctcgg cctctacacg aaaacgggct tcatcccgtc gctaccaccg gcgctcatcg
      721 acgccatcgt cgacggtttc gaggcgcatc cggaacgcgc cacgatgatg ggcttccaac
      781 actccggcgg cgcgatcgcg cgcgtggccg gcgatgccac ttcgttcccg caccggcaga
      841 tcgtcgcgac gatgctgctg aactcggagt gggatgcggc ggtcaaccaa gccccgcaca
      901 tcgactggct gcgccagtac tggcgatcgc tcgagccgca cacgcgtggt ttctacacca
      961 acgacgcgat cgaggagtcg cagcagcaga tcgacgacaa ctacgccggc aacctgccgc
     1021 ggctcgtcgc gctgaagaac cgcttcgacc cgaccaacct gtttcggctc aacgccaata
     1081 tcgtgccgac cgtttaaggc gcgtccaccc agctaccgac gagccccagc taacagcccc
     1141 gtaaaggctg tgaccactcc cactcgtcgc tgagcctgcg gatgctgctc aggagtatcg
     1201 gctccttgcc ggagtctttc ttgcggatac ccccttcgat gcgcaaacga tcgccgatgc
     1261 gcagcgtatc gacgccgatg ccggcccgcc gcagcccctg aatgttgagc cagcccaccc
     1321 gacggctgac gccatcgtcg gtttgcacag agagcagcac gtgcgggttg gtccactcga
     1381 tcttttcgag ttggcccgtg aacgtgaagc gttggcagcg ctcgaaccgc gggggatggt
     1441 gggcggccga gaggcctgca aatcccagca gcgccacggc cgccgaagcg aagggccaaa
     1501 actttgcgcg acccacgagt ctccctccgt gccgcatcgt ccaggtggcg attccggctt
     1561 cacgcccgaa ctgctttcca gcataggccg gcgccgcacg gtttgccgtc tcggaaagcc
     1621 gcaatccgga cccgtcgaca gtcctgatgc gcacaatgcg ctattgcatc tttgcttggc
     1681 ttgttcgcgc agcaatctca gccgaaactg cgctgagcga gacgcgagaa aacggttgca
     1741 aatcacacta ctcgggggat ctgaagatga tcgattcgtt gaagttttgc ttgatgctgc
     1801 tcgcggctct aggcgtggcg caacctttgg cagcacagac acgcgagcgt gggccgtggt
     1861 ggccgtccgt gcacgggcct gaagaccaag ccggcgcctc taactacgta actccggcaa
     1921 agaccctcgc cgcgctcgcg atcccgaaga cgggacagac ctacgagctc ggccatccgt
     1981 atgagaccag catgccgcag tacggctcgc gcccgtattt cttgagcgtg ctgactcgcg
     2041 cagccacccg cgcgcctggc gatccgctcg tccacacgga gtacttcacg ggctatatcg
     2101 gccagatggg gacgcagttc gatgcgctct ctcatcaggg gcgtcatgtc cgaatggctg
     2161 acggctcggt cgaagccgtg ttttacaacg gcttcacgga tacggagttg atggggcgca
     2221 cgaacgggct cggcggcgtc actgcgctcg gcgtcgagca gatgaagccg tacatcacgc
     2281 gcggcgtgtt gatcgatatc gccggcttca agcaggttcc aacgctaccg gcggcgtatg
     2341 aagtcacgat ggcggacgtg cgcggcgcgc tcgcccggca gcagatgagc gagacatcca
     2401 tcgagcaagg cgacgccgtg ctcttcaatt acggttgggc cgtgaactgg acgaatccat
     2461 cgaaatacaa cgattcgttc atcggcacgg gggagaatca aggctcaccc ggcatcggcg
     2521 ccgaggttgc gaattggctc atcgagcgga aggtcgggct cgtcggcggc gactcgtgct
     2581 gcgtggaggt tcgcggaccg gtgcctaagg agagcgtcca ccacttgctg ttcctgggcc
     2641 acggaattcc gttgctcgag aacctcgatc tcgccgagct cgcgcgcgac gaagcaagcg
     2701 agtttctgtt cctcgggcta ccggaacgga tcaaaggagc cacgggggcg ccgattcgcc
     2761 ccatcgccgt gcgatgaccg tctggtacac ggccgagcgt ggattcgtct cgtcgcacag
     2821 caagagatcg aggccgc
//
LOCUS       DATCUD010000425         1829 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60683, whole genome shotgun sequence.
ACCESSION   DATCUD010000425 DATCUD010000000
VERSION     DATCUD010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60683"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1652)
                     /locus_tag="VIQ99_06255"
     CDS             complement(<1..1652)
                     /locus_tag="VIQ99_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S9"
                     /protein_id="HEY9182782.1"
                     /translation="MTATLLGLLIGAAGLLPTTPAHGQYFGRNKVLWETFDFEILDTE
                     HFSIYHYPPRSAAVDDVARLSERWYTRLSSAFGHEFEHRNPLIIYADHSDFQQTLTTS
                     GLIGEGTGGFTESLQNRVVLPLTGVNADNDHVLGHELVHAFQFDRLEHLDRAQGESAP
                     QLPLWMTEGLAEYLSQGRHDAHTALWLRDAVLFDMLPDPENMSRLALSPYRYGQAVWA
                     YLGGRFGDRIALQLFDVASRIGLAAAVRQELDVEPEALLADFHASLRDAYGPVIDSRL
                     EAHEIARLLGHRQAGSARLNIGPSLSPDGTKLAFMSSIELFTTDLYLADVASGEILTK
                     LVSEETDPHYDYLSFIDSSVAWSPDGHYLAFTVFARGDRRIVLYDVERRRIDRELPLA
                     GVKGVSDPAWSPDGRYLAFSAIVDGQSDLYRVDVATSTVTRLTADGYTAIQPTFAPDG
                     KSLVFVTDLGPQTDLATLSFGPLQLARLDLVTLAIERLPIFPSGKHIDPHFTPDGRGL
                     LFIGEPDGVPDVFRYDLETRAVTRLTALKTGVAGITASSPALT"
BASE COUNT          293 a          576 c          659 g          301 t
ORIGIN      
        1 gtgagtgccg gcgacgacgc cgtgatgccc gcaacgccgg ttttcaacgc cgtgaggcgc
       61 gtcaccgctc gcgtctcgag gtcgtagcgg aacacgtcgg gcacgccgtc cggctcgccg
      121 atgaacagca ggccgcggcc atcgggcgtg aaatgcgggt cgatgtgctt gccgctcgga
      181 aagatcggca gccgctcgat cgcgagtgtc acgagatcga gccgcgcgag ctgtagtggg
      241 ccgaagctca gcgtcgcgag atccgtctgc gggcccaggt cggtcacgaa cacgaggctt
      301 ttgccgtcgg gtgcgaacgt cggctggatc gccgtgtagc cgtcggccgt gagccgcgtg
      361 acggtgctcg tcgcgacgtc gacacggtac aggtcgctct gtccgtcgac gatggccgag
      421 aaggcgaggt agcgcccgtc cggcgaccac gcggggtcgc tgacgccctt gacgcccgcg
      481 agcggcagct cgcgatcgat gcggcgacgc tctacgtcgt agagcacgat gcggcggtcg
      541 ccgcgcgcga acaccgtgaa ggcgaggtag tgcccgtccg gcgaccacgc gacgctcgag
      601 tcgatgaagc tcaggtagtc gtaatgcggg tcggtctctt cggacacgag cttcgtaagg
      661 atctcgccgg aggcgacgtc ggcgagatag aggtcggtcg tgaagagctc gatgctcgac
      721 atgaacgcaa gcttcgtgcc gtcggggctc agggacggtc cgatgttgag ccgcgcgctg
      781 ccggcctgcc ggtggccgag cagccgcgcg atctcgtgcg cctcgagccg cgagtcgatg
      841 acggggccat aagcgtcgcg taggctcgcg tggaagtcgg cgagcagcgc ctcgggctcg
      901 acgtcgagct cctggcgcac ggccgccgcg agaccgatgc ggctggcgac gtcgaacagc
      961 tgcagcgcga tgcggtcgcc gaaccggccg ccgaggtacg cccacacggc ttggccgtag
     1021 cggtatgggg agagtgcgag ccggctcata ttttcgggat ccggcagcat gtcgaacagc
     1081 accgcgtcgc gtagccacag cgccgtgtgc gcgtcgtgcc ggccttgcga caagtactcg
     1141 gccaatccct ccgtcatcca cagcggcagc tgcggcgccg attcgccctg agcgcggtcg
     1201 aggtgctcga gcctgtcgaa ttggaatgcg tgcacgagct cgtgaccgag cacgtggtcg
     1261 ttgtcggcgt tcacgcccgt caatggtagg acgacacggt tctgcagcga ctccgtgaag
     1321 ccgcccgtgc cctcgccgat gaggcccgac gtcgtcagtg tctgctgaaa gtcggagtgg
     1381 tccgcgtaga tgatcagcgg attgcggtgc tcgaactcgt ggccgaaggc gctagagaga
     1441 cgcgtgtacc agcgctccga cagtcgcgca acgtcgtcga cggccgccga ccgcggcgga
     1501 tagtgataga tcgagaagtg ctcggtatcg aggatttcga agtcgaacgt ttcccacagc
     1561 actttgttgc gtccgaagta ttggccgtga gcaggcgtcg tcggcagtag cccggcggcc
     1621 ccgatcagca ggccgagcaa cgtcgcggtc acgcggccgt tccgggatcg gagggtcgag
     1681 acgcttcggc agatccgccg catcacgcga tcttaccctc gttgccggcg gcctcgagct
     1741 ggcggatggg gcgcttgcgc cgagttggcg cggccttgac cgcgcctggc cggaccagta
     1801 gcgtccgata gacttgctcg ttccgcgaa
//
LOCUS       DATCUD010000426         1734 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75253, whole genome shotgun sequence.
ACCESSION   DATCUD010000426 DATCUD010000000
VERSION     DATCUD010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75253"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1734)
                     /locus_tag="VIQ99_06260"
     CDS             complement(<1..>1734)
                     /locus_tag="VIQ99_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005220435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEY9182783.1"
                     /translation="RAEIPAADDYDWEGDEPLARSLDGAVIYELHVGGFTKHPSAGVA
                     SPGTFRGIVDKIPYLKSLGITDIELLPVFAFDTQDVPAPTAALGLRNYWGYTPVSFFA
                     PHGAYAGDGDPRREFRDMVKALHAEGIGVILDVVLNHTAEGGADGPTISYKGLVNELF
                     YLLDPQERAKYLDFTGCGNTVSSNQALVAQWLLEALRFWVVEMHVDGFRFDLAAVLSR
                     DEAGKPLAHAPVIAAIEFAPELEAAHLIAEPWDAGGLYQVGSFPGFRWAEWNGRYRDS
                     IRHFLRGEPGHLAELATRIAGSSDLYAWAGKTPQNGINFVTCHDGFTLYDLVSYDVKH
                     NESNGEHNRDGRDDNLSWNSGIEGATDDPEILRLRAQRARNFVALLLVSQGVPMLTAG
                     DELLRTQRGNNNAYCQDNDSSWLDWSFAPEARAMLRFTRELIALRKRHPSLRRTRFLN
                     GRSGRAPAEIHWYGEGLEPPDWQDAQARVLCFTMPGAALDEPALHVMINMEPMARDLP
                     LPEAAERNWRRIVDTTLVAPDDVAPAGVAVGGSSYRLGPHGIAIFEDGAAVHQAGTST
                     MPPSGGSVTTI"
BASE COUNT          274 a          587 c          585 g          288 t
ORIGIN      
        1 cgatcgtggt cacgctgccg ccgctcggcg gcatcgtgct cgtgccggcc tgatgcacgg
       61 ccgcaccgtc ctcgaaaatg gcgatgccat gaggtcccag gcggtaactg ctgccgccga
      121 cggcgacgcc ggccggtgcg acatcgtcgg gcgcgacgag cgtcgtatcg acgatgcgcc
      181 gccagttgcg ctcggcggct tcgggcagcg gcagatcccg cgccatcggc tccatgttga
      241 tcatgacgtg caaggccggc tcgtcgagcg cggcgccggg catcgtgaag cacaacacgc
      301 gcgcctgcgc gtcctgccag tccggcggct cgaggccttc gccgtaccag tgaatctccg
      361 cgggcgctcg tcccgagcgg ccgttcagga agcgcgtgcg gcgcaggctc ggatggcgct
      421 tgcgcagcgc gatcagctcg cgagtgaagc gcaacatcgc acgggcctcg ggcgcgaacg
      481 accaatcgag ccagctcgag tcgttgtcct ggcagtaggc gttgttgttg ccgcgctgcg
      541 tgcgcagcag ttcgtctccg gccgtcagca tcggcacacc ctgggagacc agcagcaagg
      601 ccacgaagtt gcgcgcccgc tgcgcgcgca gacgcaggat ctcggggtcg tccgtcgcgc
      661 cttcgatgcc ggagttccag ctcaagttgt cgtcgcggcc gtcgcggttg tgctccccgt
      721 tcgactcgtt gtgctttacg tcgtagctca cgagatcgta gagcgtgaag ccgtcgtggc
      781 aggtgacgaa gttgatgccg ttttgcggag tcttgcccgc ccacgcgtag agatcgctgc
      841 tgcctgcgat ccgcgtcgcg agctccgcca ggtggccggg ctcgccgcgc aaaaaatgcc
      901 ggatggaatc tcgatagcgg ccgttccact cggcccagcg aaaccccggg aacgagccga
      961 cctgatacag cccgcccgcg tcccacggct ctgcgatcaa atgtgccgcc tcgagctccg
     1021 gagcgaactc gatcgcggcg atgacgggcg cgtgcgcgag cggcttgccc gcttcgtcgc
     1081 gcgacagcac ggccgcaaga tcgaatctga agccgtcgac gtgcatctcg acgacccaga
     1141 atcgcagcgc ctcgagaagc cattgcgcga ccagcgcttg attcgagctt acggtgttgc
     1201 cgcagccggt gaagtcgagg tacttcgcgc gctcttgcgg atcgagcagg taaaacagct
     1261 cgttgacgag ccctttgtag ctgatcgtgg gaccgtccgc gccgccctcg gccgtatgat
     1321 tcaacacgac gtcgaggatc acgccgatgc cctcggcgtg cagcgccttg accatgtcgc
     1381 ggaactcgcg gcgcggatcg ccgtcccccg cgtacgcgcc gtggggcgcg aagaagctca
     1441 cgggggtgta cccccagtag ttgcgcagcc cgagcgcggc cgtcggcgcc ggcacgtcct
     1501 gcgtgtcgaa cgcgaacacg ggcaacagct cgatatccgt gattccgagc gacttcaggt
     1561 acgggatctt gtcgacgata ccgcgaaacg tgcccgggct cgcgacgccg gccgacggat
     1621 gcttcgtgaa cccgccgacg tgcagctcgt agatgacggc gccgtcgagc gagcgcgcga
     1681 gcggctcgtc gccttcccag tcatagtcat cggctgcggg aatctcggcg cgca
//
LOCUS       DATCUD010000427         2444 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_32630, whole genome shotgun sequence.
ACCESSION   DATCUD010000427 DATCUD010000000
VERSION     DATCUD010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_32630"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2140
                     /locus_tag="VIQ99_06265"
     CDS             <1..2140
                     /locus_tag="VIQ99_06265"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9182784.1"
                     /translation="GSDAQVSHLTQGGGPNGSEVLQNTVFFGLKYAVSDTIDVFFDLL
                     DGHTESNSQQTISGASMSGPWSPTVFRDNAYLPAAVRATMVAENRQSFLLSKGGSYRG
                     ELDIYSTSESVNEFDSELFRVGFEWTMSDKWDMRVAVQTGETQKITAIYDGLRVDRMA
                     LAIDAVEIYNDRRDTNADGLPDLVADADRGTGTIICNVQRYNPTPAQLALSPGIQGKT
                     KTTVNGVVPVVSPIGLDNTISECVPFNIMGHGQITPAAADYITTPKWGDGLVEQDFAE
                     LLVRGEIADGWGAGALSLATGLTYREQSFRDGSYPVEIDELGPPFNAANLGIRGIPST
                     FSTGSPNLHQFSTVSAISGGYDVWEVFGELNVPMWRSGSGGQQLGMTFAYRSSDYSTV
                     GGFDSGKVGLDFQLFKDLRLRATASRDVREATFTERFDNAPGGGSVLDPARNQAVSVV
                     TITTFGNPSLVPESADTKVVGLVYQPSWAQGLRMSVDRWDIDITDSIQTLGAQRVVDE
                     CYYNNVLCEYVFRDNLGVLSRVGSPYLNLALARAVGTDIEIAYSRDVDWFAAGDESVS
                     VRMLGGKLDERSSTVVGSTPAEFAGTRGYPDVTANLTVSYRVSRWSVQLQERFIDEVV
                     LNRLWIEGIDVDKNTIDAESWTNLVLAFQSRSEREGGSWRVSFNVQNLFDEDPPVIAS
                     AGDTRFGAQATDNTYDEWGRRYELGFSMEF"
     gene            2192..>2444
                     /locus_tag="VIQ99_06270"
     CDS             2192..>2444
                     /locus_tag="VIQ99_06270"
                     /inference="COORDINATES: protein motif:HMM:NF019262.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HEY9182785.1"
                     /translation="MLAVAIAGGAVYFAGRDDGSVEPRAMLDRYCVGCHNDAERAGDL
                     SLERLSTDAVAARADVWEAVVRKVRTGFMPPSGEPRPQAT"
BASE COUNT          418 a          798 c          809 g          419 t
ORIGIN      
        1 cggctcggac gcgcaagtct cgcacttgac gcagggcggc ggcccgaacg ggtccgaggt
       61 cctgcaaaac acggtgttct tcggcctgaa gtacgccgtg tcggacacga tcgacgtgtt
      121 cttcgacctg ctcgatgggc acacggagtc gaatagccaa cagaccatct ccggcgcctc
      181 gatgtcgggc ccttggtcgc ctacggtctt tcgcgataac gcttacctgc cggccgcggt
      241 ccgcgccacg atggtcgccg agaatcgcca gagcttcctg ttgtcgaagg gcggcagcta
      301 ccgcggcgag ctcgacatct acagcacgag cgagtcggtc aacgagttcg acagcgagct
      361 gtttcgcgtc ggcttcgagt ggaccatgag cgacaagtgg gacatgcgcg tcgccgtgca
      421 gaccggcgag acgcagaaga tcaccgcgat ctacgacggc ctccgcgtgg accggatggc
      481 cctcgcgata gacgcagtcg agatctacaa cgaccgccgc gacacgaatg ccgacgggct
      541 gccggacctc gtcgccgatg cggatcgggg cacgggcacg atcatctgca acgtgcagcg
      601 ctacaacccg accccggcac agcttgcatt gtctcctggc attcagggca agaccaagac
      661 gacggtcaac ggcgtggttc ccgtggtgtc gccaatcggc ctcgacaaca cgatcagcga
      721 gtgcgtgccg ttcaacatca tgggtcacgg gcaaatcacg ccagccgcgg ccgattacat
      781 cacgacgccg aaatggggcg atggcctcgt cgagcaggat ttcgccgaat tgctggtccg
      841 cggcgagatc gccgacggct ggggcgccgg tgctctgtcg ctcgcgacgg gtctcacgta
      901 tcgcgagcag tcgttccgcg acggctcata cccggtcgag atcgacgagc tcggcccccc
      961 gttcaacgcc gcgaacctcg gcattcgcgg catcccatcg acgttctcga cgggtagccc
     1021 gaacctgcac cagttttcca cggtgtcggc gatctcgggc ggctatgacg tctgggaggt
     1081 cttcggcgag ctcaacgtac cgatgtggcg atccgggtca ggagggcagc agctcggaat
     1141 gacgttcgct tatcgatcgt cggattactc gaccgtcggc ggcttcgaca gcggcaaggt
     1201 cgggctggac ttccagctgt tcaaggacct gcgcctgcgc gccacggcgt ctcgcgacgt
     1261 gcgcgaagcg acgttcacgg agcggttcga caacgcgccc ggcggcggca gcgtgctcga
     1321 tcccgcccgc aatcaggcgg tgtcggtggt cacgatcacg acgttcggca atccgagcct
     1381 ggttccggaa tccgccgaca cgaaggtggt cgggctcgtc taccaaccga gctgggcgca
     1441 ggggctgcgg atgtccgtgg accgctggga catcgacatc accgactcga tccagacgct
     1501 cggagcccag cgcgtcgtcg acgagtgcta ctacaacaac gtcctgtgcg agtacgtgtt
     1561 tcgcgacaat ctcggcgtct tgagccgcgt cggcagcccc tatctgaatc tcgcgctcgc
     1621 ccgcgccgta ggcacggaca tcgagatcgc ctactcgcgg gacgtcgact ggttcgcggc
     1681 cggcgacgag tctgtctcgg tccggatgct cggcggcaag ctcgacgagc ggagtagcac
     1741 cgtcgtcggg agcacgcccg cggagttcgc cggcacgcgc ggctacccgg acgtcaccgc
     1801 aaacctgacc gtctcgtatc gcgtctcgcg ctggtccgtg cagctgcagg agcgcttcat
     1861 cgacgaggtt gtcctgaatc gcctctggat cgagggcatc gacgtcgaca agaacacgat
     1921 cgacgcggag tcctggacga acctcgtgtt ggcgttccag agccgaagcg agcgcgaggg
     1981 cggttcgtgg cgcgtttcct tcaacgtgca aaatctgttc gacgaggatc ctccggtcat
     2041 cgcctcggcg ggcgatacgc ggttcggcgc ccaggcaacc gacaacacct atgacgaatg
     2101 gggtcgccgc tacgagctcg gcttcagcat ggagttttga gggcgagtga agtcacgaag
     2161 gcgaccgctg gctcggccga tcggcctcgg tgtgctggcg gttgcgatcg cgggcggggc
     2221 cgtctatttc gccgggcgcg acgacggttc cgtcgagccc cgagcgatgc tcgatcgcta
     2281 ctgtgtcggc tgccacaacg atgccgaacg tgccggcgac ctgtcgctcg agcgtctgtc
     2341 gaccgacgcc gtagcggctc gcgccgacgt ttgggaagcc gtcgtccgca aagtccgcac
     2401 cgggttcatg ccgccgtccg gggagccgcg cccgcaggcc acgt
//
LOCUS       DATCUD010000428         1812 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_53928, whole genome shotgun sequence.
ACCESSION   DATCUD010000428 DATCUD010000000
VERSION     DATCUD010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1812
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53928"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /gene="acpS"
                     /locus_tag="VIQ99_06275"
     CDS             <1..355
                     /gene="acpS"
                     /locus_tag="VIQ99_06275"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEY9182786.1"
                     /translation="FGEHFARRLLLDEELELFKRAKRPVRFLAMRFAAKEAIVKALGT
                     GFANGIWVRDVGMLPNGLGQPQVIYSERGRALCRKLGVGEGHLTLSDEAGLIVAVAVL
                     MRAAPEDAAAAEVES"
     gene            352..1137
                     /locus_tag="VIQ99_06280"
     CDS             352..1137
                     /locus_tag="VIQ99_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEY9182787.1"
                     /translation="MNTLVFDIETVPDVELGRRLFDLGDLSDADVAKAMAAKQKQSRQ
                     TDFLPPPQQRVVAISVLLRSRDGLKLSSLGDEQSPERELVQRFFDGLERYTPTLVSWN
                     GSGFDLPVLAYRALRHGVNAHRYWEVGEGDREFRYNNYLSRYHWRHIDLMDVLSGYGA
                     SGRSSLETVAQLIGLPGKLGVGGANVWAAYQRGELKAIRDYCETDVLNTYLIYLRFQL
                     TRGELDPVGYQKELEVVEAKLAESGRPHLTEYLTLWKTTRHAR"
     gene            1127..>1812
                     /locus_tag="VIQ99_06285"
     CDS             1127..>1812
                     /locus_tag="VIQ99_06285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase"
                     /protein_id="HEY9182788.1"
                     /translation="MRAESAPVVATIVDLTHEGIGIADLEGQRVFVADALPGERVEMV
                     LRKRRRRLREADLERVLEPSPSRVLPGCEYFGRCGGCALQHLAHPAQVAFKQKVVAET
                     LRRIGRVEPEEWLPAAESAPWHYRRRARLGVKYVTGKGRVLVGFRERAGPYITDMQRC
                     PVLAPPLDGLLGELAALIERSSIKERIPQIEAAVADDASALVLRVLTAPNAADQQAFL
                     EFGQRHGIDL"
BASE COUNT          288 a          586 c          632 g          306 t
ORIGIN      
        1 tttcggcgag catttcgcac ggcgcctgtt gctcgacgag gagctcgagc tgttcaagcg
       61 agcaaaacgt cccgtgcgct ttctcgcgat gcggtttgca gccaaggaag ccatcgtcaa
      121 ggcgctcgga accgggttcg caaacggtat ctgggtgcgc gacgtcggca tgttgccgaa
      181 cgggctcggg cagccgcagg tgatttattc cgagcggggc cgcgcgctgt gccgcaagct
      241 cggcgtcggc gaggggcatc tgacactcag cgacgaagcc gggctgatcg tcgcggtcgc
      301 agtgttgatg cgtgcggcgc ccgaagatgc ggcggccgct gaggtcgagt catgaacacg
      361 ttggtattcg atatcgagac cgttcccgac gtcgagctcg ggcggcggct cttcgatctt
      421 ggcgatctct cggacgccga tgtcgcgaag gcgatggccg cgaagcagaa gcaatcgcgc
      481 caaaccgact tcctgccgcc gccgcagcag cgcgtcgtcg cgatctcggt tctgctccgg
      541 agccgtgacg gcctcaagct ctccagcttg ggcgacgagc aatcgcccga gcgagagctc
      601 gtgcagcggt tcttcgacgg cctcgagcgg tacacgccga cactcgtgtc gtggaacggt
      661 tccgggttcg atctgcccgt gctggcctat cgcgcgctac gccacggtgt caatgctcac
      721 cgctattggg aggtcggcga gggggaccgc gagtttcgtt acaacaacta cctgagccgc
      781 taccactggc gccacatcga tctcatggac gtactgtccg gctacggcgc gagcggccgc
      841 tcgtcgctcg aaaccgtcgc tcagctgatc ggtttgccgg gcaagctcgg cgtcgggggt
      901 gcgaacgtgt gggccgcgta ccaacgcggc gagctcaagg cgatccgcga ctactgcgag
      961 acggacgtgc tgaacacata cctgatctat ctgcgctttc agctcacgcg cggcgagctc
     1021 gaccccgtcg gctatcagaa ggagctcgag gtggtcgagg caaagctcgc ggaatccggc
     1081 cggccgcacc tgaccgagta tctgacgctc tggaagacca cgcggcatgc gcgctgagag
     1141 cgcgcccgtc gtcgccacga tcgtcgatct cacgcacgaa ggtattggga tcgcggatct
     1201 cgaagggcag cgggtgttcg tcgcggacgc gttgccgggc gagcgcgtcg agatggtttt
     1261 gcgcaagcgc cgacgcaggc tgcgggaggc cgatctcgag cgggtgctcg agccctcccc
     1321 atcgcgcgtc ctgcccggct gcgagtattt cggccgctgc ggcggctgcg cgctgcagca
     1381 cctcgcgcat ccggcgcaag tcgcgttcaa gcagaaggtc gtggccgaaa cgctgcggcg
     1441 catcggccgc gtcgagcccg aggagtggtt gccggccgcc gagagcgcgc cgtggcatta
     1501 ccgccgccgt gcgcggctcg gcgtcaagta cgtcacgggc aagggccgcg tgctcgtggg
     1561 ctttcgcgag cgcgccgggc cgtacattac cgacatgcag cgttgccccg tgctcgcgcc
     1621 gccgctcgac gggttgctcg gcgagctcgc ggcgctgatc gagcgcagca gcatcaagga
     1681 gcggatcccg cagatcgaag ccgccgtcgc ggacgacgca agcgcgctcg tgctgcgcgt
     1741 gcttacggcg ccgaacgcgg ccgaccaaca ggcgttcctc gagttcgggc agcggcacgg
     1801 catcgatctg ta
//
LOCUS       DATCUD010000429         1737 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11166, whole genome shotgun sequence.
ACCESSION   DATCUD010000429 DATCUD010000000
VERSION     DATCUD010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11166"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VIQ99_06290"
     CDS             <1..910
                     /locus_tag="VIQ99_06290"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182789.1"
                     /translation="DLKYLYHNSTLAIDADTGEIVWYYQHIVDHWDLDHPFERMLVET
                     AVAPDRAEVTWINPRVRAGERRKVVTGIPGKTGIVYTLDRATGEFLWARPTVQQNVLQ
                     DIDGVSGEVRVNPDALFVEVGQERFICPTSLGGKNWPSGTLSPLGNVMFFPLQNTCMT
                     SAPTLSRPSPDSLYGLRNEQRIAPNGTNVGTIYALSVETGKTLWKYEQRAAMMSLLST
                     AGGLVFGGDTNGRFRGFDQRTGNVLWEVNLGSPISGYPVTFAVAGKQYVAVSTGSSLT
                     AMGANRLTPELTPSLGNNLFVFALPD"
     gene            1020..1562
                     /locus_tag="VIQ99_06295"
     CDS             1020..1562
                     /locus_tag="VIQ99_06295"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015922340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEY9182790.1"
                     /translation="MSTALAAVTGLHAEQQRLFRQVMGRFATGVTVVSTRIGEETFGM
                     TANAFMAVSLEPMLCMVSINRTAQMHGRLLQARHYGVSFLTQEQQHFAAHFAGKRFHG
                     LRPDFDLVGRTPILKRSVAAVTADVVETLECGDHTLFVGRVNETILLDAARPLLFFGG
                     RYARLDVRAPIDDAEPPEFW"
BASE COUNT          315 a          562 c          542 g          318 t
ORIGIN      
        1 cgatctcaag tacctctacc acaactccac gctggcaatc gacgccgaca ccggcgagat
       61 cgtctggtac taccagcaca tcgtcgatca ctgggacctc gatcacccct tcgagcgaat
      121 gctcgtcgag acggccgtcg caccggatcg cgccgaggtc acgtggatca atccgcgcgt
      181 gcgcgccggc gaacggcgca aagtcgtgac gggcatcccg ggcaagacgg gcatcgtcta
      241 cacgctcgac cgcgcgacgg gcgagttctt atgggcgcgc ccgacggtgc agcagaacgt
      301 gctgcaagac atcgacggcg tatccggcga ggttcgcgtg aatcccgatg cgctgttcgt
      361 cgaggtcgga caagaacgct tcatctgccc gacatccctc ggcggcaaaa actggccgtc
      421 gggaactttg agcccgcttg gcaacgtcat gttctttccg ctgcagaaca cgtgcatgac
      481 gtcggcaccg acgctgagca ggccgagccc cgattcgctg tacggcctgc gcaacgagca
      541 gaggattgca ccgaacggca cgaacgtcgg caccatctac gcgctctccg tcgagaccgg
      601 caagacgctg tggaagtacg aacagcgagc cgcgatgatg tcgttgctgt ccacggccgg
      661 gggcctcgtc ttcggcggcg acacgaacgg ccggtttcgc gggttcgatc aacgcacagg
      721 gaacgtgctg tgggaagtga atctcggctc gccgatctcc gggtatcccg tgactttcgc
      781 agtcgcgggc aagcagtacg tcgcagtcag cacgggctcg tcgttgaccg ccatgggcgc
      841 caatcggcta acgcccgagc tcacgccgag cttgggcaac aacctgttcg tgttcgcttt
      901 gccggattga tcatcgctcg cagctctagc gatgcctagc cggcatcacg gctattcaaa
      961 aagcattagc cctagccttt ggaccgtgcc aggctgctgt ccccggggag gtcgaggcca
     1021 tgagcaccgc actcgctgca gttacgggct tgcacgccga gcaacaacgc ctgtttcgcc
     1081 aggtcatggg ccgcttcgcc acgggcgtca cggtcgtgag cacccggatc ggcgaggaga
     1141 cgttcggcat gaccgccaat gcgttcatgg ccgtttccct ggagccgatg ctgtgcatgg
     1201 tgtcgatcaa tcgcacggca caaatgcatg gccggctgct gcaggcccgt cactacggtg
     1261 tttcctttct gactcaggag cagcagcatt tcgccgccca tttcgcgggc aagcggtttc
     1321 acggtctcag gcccgacttc gatctcgtcg ggcgaacgcc tatcttgaag cgctccgtgg
     1381 ctgccgtgac cgcagacgtc gttgagacgc tcgagtgcgg cgatcacacg ctgttcgtcg
     1441 ggcgcgtcaa cgaaacgatc cttctcgacg cggctcgacc gctgttattt ttcggcggcc
     1501 gctatgcgcg gctggacgtg cgagcgccga tcgacgatgc cgagccccct gagttttggt
     1561 aggccctcag tgatgcctcg gcggcatacc cctgatccag aaagcattgg tcgcgagtcc
     1621 cgggcctgtg gcacaagtac cgcaggcgcg cgtatgacgc caacgcgata aggccacccg
     1681 ggggaaaaga tggtcgcgga gactgcagac gttctggcgc tcgtccacgc gccgtcc
//
LOCUS       DATCUD010000430         5167 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46761, whole genome shotgun sequence.
ACCESSION   DATCUD010000430 DATCUD010000000
VERSION     DATCUD010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5167
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46761"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VIQ99_06300"
     CDS             complement(<1..379)
                     /locus_tag="VIQ99_06300"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY9182791.1"
                     /translation="MVEEALRPLSDVPAINRFLSYCRVRTIPGKTVMIHAGDLPDVLY
                     YIVDGSVEVMIEDEDGNEMVLAYLNKGQFFGEMGLFYEQPQRSAWVRTRSESEIAEMT
                     YPRFRQIASESPGLIFELATQLAT"
     gene            complement(468..1106)
                     /gene="coq7"
                     /locus_tag="VIQ99_06305"
     CDS             complement(468..1106)
                     /gene="coq7"
                     /locus_tag="VIQ99_06305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007877942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone
                     monooxygenase"
                     /protein_id="HEY9182792.1"
                     /translation="MLAAPDWPDRLIAALDRGLRAVAAPATAGRPSPAADVAEAPLSV
                     EERGASAALMRVNHAGEVAAQALYHGQSLLARSAATRDLLESAAREERDHLAWCAERI
                     DELGGRPSLLTPFWYAGSYCIGVLAAVADDARSLGFVAETERQVEMHLRDHLGRLPPQ
                     DRKSAAILTRMQQDEAHHGTTAALAGGAELPAVIRGCMALGGEILRRVAYIV"
     gene            1238..1666
                     /gene="rplM"
                     /locus_tag="VIQ99_06310"
     CDS             1238..1666
                     /gene="rplM"
                     /locus_tag="VIQ99_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018274907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY9182793.1"
                     /translation="MKTVFANSETVRRDWYLVNAEGKTLGRLATALAHRLRGKHKPSY
                     TPHVDTGDFIVVINAEKIRVTGRKLKDKIYYRHTGTIGNMKSEPLERVLATHPERAIE
                     IAVKGMLPKNSLGRQMFKKLKVVRGDKHPHAAQQPKPLEL"
     gene            1670..2062
                     /gene="rpsI"
                     /locus_tag="VIQ99_06315"
     CDS             1670..2062
                     /gene="rpsI"
                     /locus_tag="VIQ99_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY9182794.1"
                     /translation="MAIEINYGTGRRKSSAARVYLKPGNGDILVNGRPLDVFFGRETA
                     RMIVRQPLVVAEAVDRFDVHVTVRGGGTTGQAGAIRHGITRALMDYDEGLRKTLRKAG
                     FVTRDAREVERKKVGLRKARRRPQYSKR"
     gene            2118..2191
                     /locus_tag="VIQ99_06320"
     tRNA            2118..2191
                     /locus_tag="VIQ99_06320"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2150..2152,aa:Gln,seq:ctg)
     gene            complement(2211..2867)
                     /gene="rpiA"
                     /locus_tag="VIQ99_06325"
     CDS             complement(2211..2867)
                     /gene="rpiA"
                     /locus_tag="VIQ99_06325"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEY9182795.1"
                     /translation="MTQDTNKRRAATAALSYIKDGMSLGVGTGSTVDILIELLQPLAN
                     KLGSVVSSSERSTRRLAEIGIRTVDLGSTGDLDLYIDGADEATKHRHLIKGGGGALTR
                     EKIIAAASRRFVCIIDETKLVPTLGRFPLPVEVIPMAQSYVARQMVKAGGQPVLREGF
                     ITDNGNHIIDVHNLKIANPLELETRFNQIAGIVTVGVFAHRPADVLLIGSASGVKTIQ
                     "
     gene            complement(3201..3665)
                     /locus_tag="VIQ99_06330"
     CDS             complement(3201..3665)
                     /locus_tag="VIQ99_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020158248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEY9182796.1"
                     /translation="MNHWLMKSEPDVFGVDDLAKSPRRTTFWSGVRNFQARNFMRDGM
                     RVGDLAFFYHSNCDEPGIVGVMKVVKAGYPDHTAFDRSCDGFDPDSDSSHPRWYMVDV
                     QLIRKLARPITLTRLRQYEKRELKGLALLQRGNRLSVTPVSASHWDFILDLA"
     gene            complement(3678..4268)
                     /locus_tag="VIQ99_06335"
     CDS             complement(3678..4268)
                     /locus_tag="VIQ99_06335"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEY9182797.1"
                     /translation="MITAADPERRELRKRMRAARRALPAVTRAEADRAIQRHIERLAA
                     FRSARRVAVFLAFDGEPSLARLIARAHRRGKRLYAPVLRGMTMTFAEIEVSAEFATNF
                     FGILEPKLGAKIDARELDLVLTPLVAFDDRGTRIGVGRGYYDRCFRFLANRRHWRRPK
                     LLGVAYELQRVKPLASQSWDVPLWGVATEAGARRFS"
     gene            complement(4267..4451)
                     /gene="ssrS"
                     /locus_tag="VIQ99_06340"
     ncRNA           complement(4267..4451)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VIQ99_06340"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(4462..4776)
                     /locus_tag="VIQ99_06345"
     CDS             complement(4462..4776)
                     /locus_tag="VIQ99_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003457489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEY9182798.1"
                     /translation="MTGANAHVSIRILEKEYNVACPVEEKASLLASAELLNSKMREIR
                     DSGKVVGLDRVAVMAALNLANDLLKAQGHDEELKNIVGLRIRAMREQLDSALGPAKQL
                     TL"
     gene            complement(4773..5006)
                     /locus_tag="VIQ99_06350"
     CDS             complement(4773..5006)
                     /locus_tag="VIQ99_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02449 family protein"
                     /protein_id="HEY9182799.1"
                     /translation="MAAEQSNHRFDIELKRLEKRLEELVVVTRQLQEENRSLRAKQDS
                     LMSERASLLHKNEQVRGRVEAMIGRLKGMEQVS"
BASE COUNT          925 a         1637 c         1617 g          988 t
ORIGIN      
        1 gagtagcgag ctgagtcgcc aactcgaaga tcagcccggg gctctcggag gcgatctggc
       61 ggaagcgcgg ataggtcatt tccgcgatct cgctctcgga gcgcgtacgc acccaagcgc
      121 tgcgttgcgg ctgctcgtag aacaggccca tctcgccgaa gaactggccc ttgttcagat
      181 aggcgaggac catctcgttg ccgtcctcgt cctcgatcat cacctcgacg gaaccgtcga
      241 cgatgtaata gagaacgtcg ggcaggtccc cggcgtggat catcacggtc ttaccgggaa
      301 tcgtgcgcac cctgcaataa ctcaggaagc ggttgatcgc cggcacatcg ctcaggggcc
      361 tcagggcttc ttcgaccata cgtcggaact ccggtttgac ttaacgctgt atttaatcaa
      421 ttcccgaacg gtgcgcaagc aattgatagt gaaagctgag acgtcggtca cacgatgtat
      481 gcgactcggc gcaagatttc gcctccgagc gccatgcaac cccggatcac tgccggcagc
      541 tcggcgccgc ccgccagcgc cgcggtggtg ccgtgatggg cttcgtcttg ctgcatacgc
      601 gtgagaattg cagcactctt tcggtcttgt gggggcagcc ggccgaggtg atcgcgcaag
      661 tgcatctcga cctgacgctc ggtctccgcg acgaagccca agctccgcgc atcgtcggcg
      721 accgcggcga gcactccgat gcagtagctg cctgcatacc agaacggggt tagtaggctc
      781 ggccgaccgc cgagctcgtc gatccgttcc gcgcaccagg ccaggtgatc gcgttcctcg
      841 cgcgcggcgc tctcgagcag gtcgcgggtc gcggccgagc gcgcgagcag ggactgcccg
      901 tggtagagcg cctgggcggc aacctcgccg gcatgattca cgcgcatcag ggccgcgctt
      961 gcgccgcgtt cctcgacgga caggggggcc tcggcgacgt ccgcggccgg cgaagggcgg
     1021 cccgccgtgg cgggcgcggc cacggcccga agcccccggt ccaacgcggc aatgaggcgg
     1081 tccggccaat cgggcgcagc gagcatgaac ccattatata gacgcgcccg ggccgccctt
     1141 gggttgcgcg ctcttggctt gcgcccctgg ggggtcggcc agtaagattc cgcctctttg
     1201 gccggcgggc gccggctcca tctagagtct tggatccatg aaaacagtct ttgcgaactc
     1261 ggagacggtc cggcgcgatt ggtatttggt caatgccgaa ggcaagacgc tgggtcggtt
     1321 ggctacggcg ctcgcgcacc ggctgcgcgg caagcacaag ccgagctata cgccgcacgt
     1381 cgacaccggc gatttcatcg tcgtgatcaa cgccgaaaaa atccgcgtga cgggccgcaa
     1441 gctcaaggac aagatctatt accgtcatac cggcacgatc ggcaacatga agtccgagcc
     1501 cctggagagg gtcctcgcga ctcaccccga acgcgccatc gagatcgccg tcaaaggcat
     1561 gctgccgaag aactcgctcg gccggcaaat gttcaagaaa ctcaaggtcg tgcgcggcga
     1621 caagcatccg catgccgcgc agcagcccaa accgctggag ctctaggtca tggccatcga
     1681 aatcaattac ggcacgggcc gtcgcaagtc ctcggccgct cgcgtatacc tcaagccggg
     1741 taacggggac atcctcgtca acggtcgtcc gctcgacgtg ttcttcggcc gcgagacggc
     1801 acgcatgatc gttcgccagc cgctcgtggt tgcggaggcc gtggatcgct tcgacgtgca
     1861 cgtgacggtt cgtggtggcg gcaccacggg ccaggccggt gcgattcgcc acggcattac
     1921 gcgcgcactg atggactacg acgagggttt gcgcaagact cttcgcaagg ccggtttcgt
     1981 cacgcgcgac gcgcgcgagg tcgagcgcaa gaaggtcggt ctgcgtaagg cgcgtcggcg
     2041 cccgcagtac tcgaagcgtt agttctcgac tgcgcgggca cgcgcggacg ttgtgctagc
     2101 gttgcgtcct cacggattgg gggatcgtcc agcggtagga catcggactc tgactccgag
     2161 aacctaggtt cgaatcctag tcccccagcc acccctcgtg cgacggccgg tcactgaatc
     2221 gtcttgacgc cgctggcgct gccgatcagc aacacgtcgg ccgggcgatg cgcgaacact
     2281 cccactgtca cgattccggc gatctgattg aagcgcgtct cgagctcgag cggattcgcg
     2341 atcttcaagt tgtgcacatc gatgatgtga ttgccgttgt cggtgatgaa tccctcgcgc
     2401 aataccggtt gcccgccggc ctttaccatc tgacgcgcca cgtacgactg ggccatcgga
     2461 atgacttcca cgggtagagg aaagcggccc aacgtcggca cgagcttcgt ctcgtcgatg
     2521 atgcaaacga agcggcgcga tgcggctgcg atgatctttt cgcgcgtcaa cgcgccgccc
     2581 ccacccttga ttagatgccg gtgcttcgtg gcttcgtcgg ctccgtcgat atagagatcg
     2641 aggtcgcccg tcgagccgag atcgacggtg cgaatgccga tctcagcgag gcggcgagtc
     2701 gatctttcgg agctcgacac gaccgatccg agcttgttcg cgagtggctg tagcagctcg
     2761 atcaagatgt cgaccgtgct tcccgtgccg acgccgagcg acattccgtc cttgatgtaa
     2821 gacaacgccg cggtcgccgc tctgcgtttg ttcgtgtctt gagtcatcga ggcgcctccc
     2881 aaaaagatag tgcccgcaac gtggcgggca ctacactcat acgagccttc ggctctttag
     2941 cgttttttgc ggcgggcctt tttctttcgc ttcttcgccg gtcgcttcgc tttcttgcgt
     3001 gacgctttct ttctagaggc catgggtagt ctccgttgtc gggatagacg gcgttgagta
     3061 tatataaatc aagacggatt accagcgggc cacaaacttt tgcgcgtcga tctcgtgcgc
     3121 acgcgagcgc agagtgtgat tcgttactca ctctcacgca ttcgcgaaca ccgcagcgac
     3181 gtcgcgtgag gttgcaacga ctacgcaaga tcgagaatga aatcccagtg tgacgcgctc
     3241 accggtgtca cggataaacg attgccgcgt tgcagcaacg cgagcccttt gagctcgcgt
     3301 ttctcgtatt gtcgaagccg tgtgagcgtg atgggtcgcg cgagcttgcg gattagttgc
     3361 acgtcgacca tgtaccagcg cggatggctc gagtcgctgt cgggatcgaa gccgtcgcag
     3421 ctccggtcga acgccgtgtg atcgggataa cccgccttga cgaccttcat cacaccgacg
     3481 atgcccggct cgtcgcaatt gctgtgatag aagaacgcga ggtcgccgac gcgcatcccg
     3541 tcacgcatga aattgcgcgc ctggaagttc cggacaccgc tccagaacgt cgtccggcgg
     3601 gggctcttgg ccaggtcgtc gacgccgaaa acgtcgggct cggacttcat gagccagtgg
     3661 ttcactcgcg cgaatcctca gctgaaacgc cgcgctccgg cctcggtcgc gacaccccac
     3721 agcgggacgt cccagctttg cgatgcgagc ggtttcacac gttgtagctc gtaagccaca
     3781 ccgagcagct tcggccggcg ccaatggcgc cggttcgcca ggaaacggaa gcacctatcg
     3841 tagtaaccgc ggcccacacc gatccgcgtg ccgcggtcgt cgaaggcgac gagcggcgtc
     3901 agcacgaggt cgagctcgcg agcgtcgatc ttggcgccga gcttgggttc caagatgccg
     3961 aagaagttcg tggcgaactc ggcgcttacc tcgatctccg cgaacgtcat cgtcatgccg
     4021 cgcagcaccg gcgcatacag gcgcttcccg cgccggtgcg cgcgagcgat caatcgcgcg
     4081 agcgacggtt cgccgtcgaa cgcgaggaac acggcgacgc gtcgcgcgct gcgaaacgcg
     4141 gcgagccgct cgatgtgtcg ctggatggcg cgatcggctt cggcgcgcgt cactgccggc
     4201 aaggcgcggc gcgccgcgcg catgcgcttg cgaagctcgc ggcgttcggg atctgccgcc
     4261 gtgatgatgc tccccgcctg tgccgtcacg aaccgttgct ctcgaaccgg agcaacaggt
     4321 ggggtacgcc gtcgaggctt aaggctctcc ggttagaccg gatttgcaca acaccgccga
     4381 cagagcttaa ccccataggc atgatttagg gtccgagaga ccttcgtccg cgtcgtacac
     4441 cgcagggagc accaaggctg attatagagt gagctgcttc gcgggaccga gagccgagtc
     4501 cagttgttcg cgcatcgcgc gaatcctcaa accgacgatg tttttcagct cttcgtcgtg
     4561 gccttgtgct ttcagcagat cgttggcgag attcagcgcg gccatcaccg ccacgcggtc
     4621 gagcccgacc actttgccgc tatcccgaat ctcgcgcatc ttgctgttca gaagctccgc
     4681 cgaagcgagc agtgaggctt tttcttcgac cgggcaggcg acgttgtatt ccttctcgag
     4741 gatgcggatc gacacatgcg cattcgcgcc tgtcacgaaa cttgctccat gcccttgagc
     4801 cggccgatca tggcttccac gcgaccccgc acctgctcgt tcttgtgcag gagcgaggcg
     4861 cgttccgaca tcaacgaatc ctgcttcgcg cgcagcgagc ggttctcttc ctgtagctgc
     4921 cgggttacaa cgacgagctc ttcgagacgc ttttcgaggc gcttgagctc gatgtcgaag
     4981 cggtgattgg attgctctgc tgccatggcg cgaatataga gccgtgagcg ggcgagggtc
     5041 aacaattcac gtggcggtgt tagcatgccc gtgcgcttgt tgcgcaacac gtcgccgtga
     5101 taccgggctc cgccaacacg acactcgact acgatcgctt gcgcgactcg ctcgccgatg
     5161 cctgcac
//
LOCUS       DATCUD010000431         6738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60736, whole genome shotgun sequence.
ACCESSION   DATCUD010000431 DATCUD010000000
VERSION     DATCUD010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6738
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60736"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..132
                     /locus_tag="VIQ99_06355"
     CDS             <1..132
                     /locus_tag="VIQ99_06355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004142954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9182800.1"
                     /translation="TGALNRDYTLVMGVVVFYGVLIIAFNFLVDLAYAWLDPKVRYR"
     gene            129..1013
                     /locus_tag="VIQ99_06360"
     CDS             129..1013
                     /locus_tag="VIQ99_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019645424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY9182801.1"
                     /translation="MSAAAPSVEAQVAGRSLWADAWAKLKRNRAAVVSAWIIGAMAAL
                     VIVGPYFSRYAYDFTDFANTSIAPSWSTGHWFGTDTLGRDIFVRTLYGGRISLLVGIV
                     ATAVSLLIGVTYGAVAGYFGGRVDMLMMRIVDILYALPFMFFVILLMVFFGRSIVLIF
                     VAIGAINWLDMARIVRGQTLSLKHREFVDAAQAQGVGAAAIIRRHIVPNLLGIVAVYV
                     TLTIPQVILVESFLSFLGLGVQEPMTSWGALVNDGSRELESAPWMLIFPAAFLAAALF
                     CFNFVGDGMRDALDPKDR"
     gene            1016..2854
                     /locus_tag="VIQ99_06365"
     CDS             1016..2854
                     /locus_tag="VIQ99_06365"
                     /inference="COORDINATES: protein motif:HMM:NF008453.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182802.1"
                     /translation="MALLEVHGLNVRFATPDGEVHAVKDLSFTLDKGETLGIVGESGS
                     GKSQSMLSLIGLLAANGRATGSARFAGRDLLTMSAGELREIRGRKIAMIFQDPMTSLN
                     PYLTIEAQMIEVVRAHERVSRAAARARCLAMLEAVAIPEAAARLKRYPHELSGGMRQR
                     VMIAASLLLNPEVLVADEPTTALDVTVQAQILELLKDLKRRFDTAIVLITHDLGVVAG
                     LADRVLVMHGGELKEQGTVRDVFYRPQHDYTRSLLRAVPRLDAPVPTEARIAEPAAQP
                     LIAVESLRVHFPVPGAGWFGKREMLRAVDGVDLRLEPGETLGVVGESGSGKSTLARAI
                     LKLVPATAGSVTVLGRELAALSAPGLRAIKREIQVVFQDPLASLNPRMTVGDIVSEPL
                     WTHRPELPPSEVRAQVVDVLRRVGLSGSELNRYPHEFSGGQCQRIGIARALVLKPKII
                     VCDEPVSALDVSIQAQIVRLLLDLRREFGLALIFIAHDLAVVRQLSHRVMVMYLGRIM
                     EVAGRDDLYERPSHPYTQALMSAVPLPDPDAERARRREVLGGDLPSPIRPPSGCRFRT
                     RCPHAVVRCAEEMPALRTFRGALVACHRAEELDNMRAREGNLVRSS"
     gene            2880..3515
                     /locus_tag="VIQ99_06370"
     CDS             2880..3515
                     /locus_tag="VIQ99_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019701659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9182803.1"
                     /translation="MTALVALVPALVGPARSDAQAPPPPLMPIALSGDAERGAVLAQT
                     CAGCHGIPGAFNANPAYHVPKLGGQNADYIEVALQGYRRGTRGHATMQAQASSLTDQD
                     IADVAAYFAAIEGEPDAGRMSASAAEIEAGRAKAATCVACHGAEGVAGAPQWPNLAGQ
                     HESYLVEALEQYKNGGRVDMVMNPLIAPLDEVSLEELAAFFSAQAHLHNTD"
     gene            3570..4208
                     /gene="rsmG"
                     /locus_tag="VIQ99_06375"
     CDS             3570..4208
                     /gene="rsmG"
                     /locus_tag="VIQ99_06375"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: protein motif:HMM:NF014575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEY9182804.1"
                     /translation="MPTAEAAVSPLTISRRLAAVGMPQADDTSASLARFVELLLRWNR
                     VYNLTGVRGVDEILDRHLVESFALRPLLRGTRIADVGTGAGLPGVPLAIAEPTRHFTL
                     IESRAKRVHFLRHVVTELKLANVEVAHGRAEHLHVERPFDTVLARAVAPPAELLAIAR
                     HLTAPGSILLMLTAAHLHEQFRGSAPDFVWRPVPTGGPALRSSIVLLERISV"
     gene            4239..5030
                     /locus_tag="VIQ99_06380"
     CDS             4239..5030
                     /locus_tag="VIQ99_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015488788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY9182805.1"
                     /translation="MGTVICVTNQKGGVGKTTTCVNLAASLAATQRRVLLIDLDPQAN
                     ATMGCGIDKNSLEQTICDVLLDDVPIADVLQVPPEGGFTVVPSNQELTAAEVELVQKP
                     DREFRLRKALAPIVGQYDYVLIDCPPALNMLTVNALTASDSVLIPMQCEYFALEGLSA
                     LIGTIDKIRATANPKLAIHGILRTMFDPRNNLANEVSAQLHAHFGDRVFNTVIPRNVR
                     LAEAPSFGRPVLFHDKFSRGALAYLALAGEVNRRSGAALPRDPSA"
     gene            5084..6001
                     /locus_tag="VIQ99_06385"
     CDS             5084..6001
                     /locus_tag="VIQ99_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012639842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEY9182806.1"
                     /translation="MNKRKSLGRGLDALLSSVRPSQEPTAPGAPVLAGKPPESGLREV
                     PIDLLRRGKYQPRVDMREESLAELAESIKAQGVVQPIVVRPLPHQAGAETEYEIVAGE
                     RRWRAAQIAGLATIPAVIRDIPDEAAVAVALIENIQRENLNPIEEAQSLHRLTEEFGL
                     THADAAEAVGRSRAAVTNLLRLLELPRPVREMLERRQLDMGHARALLGLADAELTLEL
                     AARALKQGWSVRETEDAVRKQAGPAGKAKSGKGRARGAADPNIRRLETDLTEKLGAAV
                     AIEHGPKGGRVVIRYNGLEELEGILEHIQ"
     gene            6152..6550
                     /locus_tag="VIQ99_06390"
     CDS             6152..6550
                     /locus_tag="VIQ99_06390"
                     /inference="COORDINATES: protein motif:HMM:NF015834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HEY9182807.1"
                     /translation="MIDVKHVVPLTLLAQLCVSLAVAAVLWVWVGKVEAVSALLGGAA
                     VVVPNGFLAARLLASNRDPRDAAMMRAAWIGEIGKLLLTALLFAVIFKAVRPLAPLAV
                     FAGFIAAQLVVFGALLIGSNVPGKEAVTKS"
     gene            6554..>6738
                     /locus_tag="VIQ99_06395"
     CDS             6554..>6738
                     /locus_tag="VIQ99_06395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182808.1"
                     /translation="MDEEHTGGHGETAGEYIQHHLTNWQVCRVDDAWVWNSTEHPTVC
                     KGNFWAINVDSMAFSIVL"
BASE COUNT         1044 a         2252 c         2327 g         1115 t
ORIGIN      
        1 acgggcgcgt tgaaccgcga ctacacgctc gtgatgggcg tggtcgtgtt ctacggcgtg
       61 ctgatcatcg cgttcaactt cctcgtcgac ctcgcgtatg cgtggctcga tccgaaggtg
      121 cggtaccgat gagcgcagcg gcaccttcgg tcgaagcgca agtcgcgggc cgcagcctgt
      181 gggccgacgc gtgggccaag ctcaagcgga accgtgccgc ggtcgtcagt gcgtggatca
      241 tcggcgcgat ggccgcactc gtgatcgtcg gcccgtactt cagccgctac gcgtacgact
      301 tcacggactt tgcgaacacc tcgatcgcac cgagctggtc cacggggcac tggttcggga
      361 ccgacacgct gggccgcgac atcttcgtcc gcacgctgta cggcggccgg atctcgctgc
      421 tggtcggcat cgtcgcgacc gccgtgagcc tgctgatcgg cgtcacctac ggcgccgtcg
      481 cgggctactt cgggggccgc gtcgacatgc tcatgatgcg catcgtcgac attctgtacg
      541 cgctgccgtt catgttcttc gtgatcctgc tgatggtgtt cttcggccgc agcatcgtgc
      601 tgatcttcgt cgcgatcggc gcgatcaact ggctcgacat ggcgcggatc gtgcgcgggc
      661 aaacgctgag cctgaagcac cgcgagttcg tcgacgcggc acaagcgcag ggcgtgggcg
      721 ccgccgcgat catccgccgt cacatcgtgc cgaacctgct cggcatcgtg gccgtgtatg
      781 tgacgctgac gatcccgcag gtgattctcg tcgaatcgtt cttgagcttc ttaggtctcg
      841 gcgtccaaga gccaatgacg tcgtggggcg cgctcgtcaa cgacggcagc cgggagctcg
      901 agagcgcgcc gtggatgctg atcttcccgg ccgcgttcct cgccgccgcg ctcttctgtt
      961 tcaacttcgt cggcgacggc atgcgcgacg cgctcgaccc gaaggaccgc tgacgatggc
     1021 gctgctcgag gtccacggct tgaacgtccg cttcgcgacg cccgacggcg aggtgcacgc
     1081 cgtcaaggac ttgagcttca cgctcgacaa aggcgagacg ctggggatcg tcggcgagtc
     1141 gggctcgggc aagagccaga gcatgctgag cttgatcggc ctcctggctg cgaacggccg
     1201 cgcgaccggc tcggcgcgct tcgcgggccg cgatctgctg acgatgtcgg ccggcgagct
     1261 gcgcgagatc cgcggccgca agatcgcgat gatcttccag gacccgatga cctcgctgaa
     1321 cccgtacctg acgatcgagg cgcagatgat cgaggtcgtg cgcgcgcacg agcgtgtgtc
     1381 gagggccgcg gcgcgggcgc gttgcctcgc gatgctcgaa gccgtcgcga tcccggaggc
     1441 ggccgcgcgc ttgaagcgct acccgcacga gctctcgggc ggcatgcgcc aacgcgtgat
     1501 gatcgcggcg agcttgctgc tgaatcccga ggtgctcgtc gccgacgagc cgacgaccgc
     1561 gctcgacgtg acggtccagg cgcagatcct cgagttgttg aaggatctga agcggcgctt
     1621 cgacaccgcg atcgtgctga tcacgcacga cttgggtgtc gtggcggggc tcgcggatcg
     1681 cgtgctcgtg atgcacggcg gcgagctcaa ggagcagggc acggttcgcg acgtgttcta
     1741 tcgcccgcag cacgactaca cgcgctcgct gttgagagcc gtcccgcggc tggacgcgcc
     1801 cgtgcccacg gaggcgcgga ttgccgagcc cgccgcccag ccgctgatcg cggtcgagtc
     1861 gctgcgcgtg cacttcccgg tcccgggtgc cggctggttc ggcaagcggg agatgttgcg
     1921 cgccgtcgat ggcgtcgacc ttaggctcga gcccggggag acgctcggcg tcgtgggcga
     1981 gtccggcagc ggcaagtcga cgctggcgcg cgcgatactg aagctcgtgc cggcgacggc
     2041 gggctccgtg accgtgctcg gccgcgagct cgcggcactg tccgcgccgg gcctgcgcgc
     2101 gatcaagcgc gagatccagg tcgtgttcca agatccgctc gcgtcgttga acccgcgtat
     2161 gacggtcgga gacatcgtca gcgagccgct gtggacgcat cgccccgagc tccctccgtc
     2221 agaagttcgc gcccaggtcg tcgacgtgct gcggcgtgtc ggcctctcag gatccgagct
     2281 gaaccgctat ccacacgagt tctcgggcgg gcaatgccaa cggatcggca ttgcgcgggc
     2341 gctcgtgctg aaaccgaaga tcatcgtctg cgacgagccg gtcagcgcgc tcgacgtgtc
     2401 gattcaagcc cagatcgtcc gcctgttgct cgacctacga cgcgaattcg ggctcgctct
     2461 gatcttcatc gcgcacgacc tcgcggtcgt tcggcagctc agccatcgcg tcatggtcat
     2521 gtacctcggg cgcatcatgg aggtcgcggg ccgcgacgat ctgtacgagc ggcccagcca
     2581 cccgtatacg caggcactca tgagcgccgt gccactaccg gatcccgatg ccgagcgggc
     2641 gcggcgccgg gaagtgctag gcggcgacct gccgtcgccg attcgcccgc cgagcggctg
     2701 ccggttccgc acgcgctgcc cgcacgccgt cgtgcgctgc gccgaggaga tgccggctct
     2761 acgtactttc cgaggtgcgc tggtcgcgtg ccatcgcgcc gaggaattgg ataatatgcg
     2821 cgcccgagaa gggaatctcg tcaggagctc ttaaggccgt gtttcgatcc cccctagtcg
     2881 tgaccgcgtt ggtcgccctc gttccggcgc tggtcggccc ggcccgaagc gacgcccaag
     2941 cgccaccgcc gccgctgatg ccgatcgcac tttcgggcga cgccgagcgc ggcgccgtgc
     3001 tcgcgcaaac ctgcgccggc tgccacggca ttccgggcgc gttcaacgcg aaccccgcgt
     3061 atcacgtgcc gaagctcggc ggccaaaatg ccgattacat cgaggtcgcg ctgcaggggt
     3121 atcgccgcgg cacgcgtggc cacgccacga tgcaagcaca ggcgtcctcg ctgacggacc
     3181 aggacatcgc ggacgtcgcg gcgtatttcg ccgccatcga gggcgagccc gatgccgggc
     3241 gcatgagcgc ttcggccgcc gagatcgagg ccggccgcgc gaaggccgcc acgtgcgtcg
     3301 cgtgccacgg ggccgaaggc gtggcaggcg cgccgcagtg gccgaatctc gcaggtcagc
     3361 acgagtccta cctcgtcgag gcgctcgagc aatacaagaa cggcggccgg gtcgacatgg
     3421 tcatgaaccc gctgatcgca ccgctcgacg aggtgagcct cgaggagctc gcggctttct
     3481 tctcggcgca agcgcacctg cacaacaccg actaatctcg gccaggtgcg gcgcgccgcg
     3541 aggcgcggtt gcgaggcata ctcggccgca tgccgaccgc cgaagccgcc gtttcgccgc
     3601 tcacgatcag ccgccgcctc gcggccgtcg gcatgccgca agccgacgac acgagcgcct
     3661 cgctcgctcg gttcgtcgag ctcttgctgc gctggaaccg cgtttacaat ttgaccggcg
     3721 tgcgcggtgt ggacgagatc ctcgaccggc acttggtcga gagcttcgcg ctacggccgt
     3781 tgctgcgcgg gacgcggatc gcggacgtcg gcaccggggc cggtctgccc ggcgtgccgc
     3841 tcgcgatcgc ggagcccacg cgccacttca cgttgatcga gagccgcgcc aagcgcgtgc
     3901 acttcctgcg tcacgtcgtg accgagctca agctcgcgaa cgtcgaggtt gcccacggcc
     3961 gggccgagca cttacacgta gagcgcccgt ttgataccgt gctggcccgc gcggtggcgc
     4021 cgccggccga gctgctggcg atcgcgaggc acctcacggc gcccggcagc attctgttga
     4081 tgttgacggc cgcgcacctg cacgagcagt ttcgcgggtc ggcgccggat ttcgtgtggc
     4141 ggcccgtgcc caccggggga ccggcgttgc ggagctcgat cgtgttgttg gaacgtatca
     4201 gtgtgtaacc gaagtgccga agatcgcggg gtgagcatgt gggcaccgta atctgcgtca
     4261 cgaaccagaa gggcggggtc ggtaagacca ccacctgcgt gaacctcgcg gcctcgctgg
     4321 ccgcgacgca gcgccgcgtg ctgttgatcg acctcgatcc gcaggccaat gcgacgatgg
     4381 gttgcggcat cgacaagaac tcgctcgagc agacgatctg cgacgtgctg ttggacgacg
     4441 tcccgatcgc cgacgtgctg caagtcccac ccgagggcgg cttcacggtc gtgccgagca
     4501 accaagagct caccgccgcc gaagtcgagc tcgtgcagaa accggatcgc gagttccggc
     4561 tgcgcaaggc gctggcgccg atcgtggggc aatacgatta cgtgctgatc gactgtccgc
     4621 cggcgctgaa catgctgacc gtgaacgcgc tgaccgccag cgattccgtg ctgatcccga
     4681 tgcagtgtga atacttcgct ctggaaggct tgagcgcgct gatcggcacg atcgacaaga
     4741 tccgcgcgac cgcgaacccg aagctcgcga tccacggaat cctgcgcacg atgttcgatc
     4801 cgcgaaacaa cttggcgaac gaggtctccg cgcagctgca cgcgcatttt ggcgatcgcg
     4861 tgttcaacac cgtgatcccg cgcaacgtgc gcctcgccga ggccccgagc ttcggccgcc
     4921 ccgtgctgtt ccacgacaag ttctcgcgcg gtgcgctcgc gtatctggcg ctcgccggcg
     4981 aggtcaaccg ccgctccggc gccgcgctgc cgcgtgatcc gagcgcctga ctttaggacg
     5041 ctgctacaat cttgcgcgga cccctaggcc ccgtcgccac tcgatgaaca aacgcaaaag
     5101 cctcgggcgc ggactcgacg ctcttttgag cagcgtgcgg ccttcgcagg agccgaccgc
     5161 gcccggcgcg ccggtcctcg ccggaaagcc gcccgagtcc gggctgcgcg aggttccgat
     5221 cgatctgctg cgacgcggca agtaccagcc gcgcgtcgac atgcgcgagg aatcgctggc
     5281 cgagctcgcc gagtcgatca aggcccaggg ggtcgtgcag ccgatcgtgg tgcggccatt
     5341 gccccaccaa gccggtgccg agaccgagta cgagatcgtg gccggcgagc ggcgctggcg
     5401 ggctgcgcaa attgcggggc tcgcgacgat cccggccgtg attcgcgaca tccccgacga
     5461 agccgcggtg gccgtcgcgc tgatcgagaa cattcaacgc gagaacctga atccgatcga
     5521 ggaggcgcag tcgctgcatc gcctcacgga ggagttcggc ctgacccacg cggatgcggc
     5581 cgaggcggtc gggcggtctc gcgccgcggt cacgaacttg ctccggctgc tcgagctgcc
     5641 gcgcccggtc cgcgagatgc tggagcgacg ccagctcgac atgggccacg cccgtgcctt
     5701 gctgggcctg gccgacgccg agctcacgct cgagctggcc gcgcgggcgc tgaagcaggg
     5761 gtggagcgtc cgtgagaccg aggacgcggt ccgcaagcag gccgggccgg cgggcaaggc
     5821 gaagtccggc aaaggccggg cccgcggggc ggccgatcct aacatccgcc gcctcgagac
     5881 cgatctcacc gagaagctcg gcgccgcggt cgcgatcgag cacggcccga agggcggacg
     5941 ggtcgtgatc cgctacaacg gcctcgagga gctcgaaggc atcctcgagc acatccaata
     6001 accataaggc cgccgagacg ccgcgcggcc gttgaatacc acggggtgcc cctttagaat
     6061 gcccgcggcc gaaaagcggt cacgcatcgt cgtggccgat ttgccgcagc ccaaagccct
     6121 tccgccggcc tggcatcgca gaggcgccgt ggtgattgac gtcaagcacg tcgtaccttt
     6181 gacgctgctc gcgcagctct gtgtgagtct cgcggtggcc gcggtgctgt gggtgtgggt
     6241 gggcaaggtc gaggcggtct cggcgttgct cggcggcgcg gctgtggtcg tcccgaacgg
     6301 cttcttggcc gcgcgcttgc tcgcgtcgaa tcgcgatccg cgcgacgctg cgatgatgcg
     6361 cgcggcgtgg atcggcgaga tcggcaagtt gttgctgacg gcgctgctgt tcgcggtgat
     6421 cttcaaggcc gtgcggccgt tggcgccgct cgccgtgttc gcggggttca tcgcggcgca
     6481 gttggtggtt tttggtgcgt tgctgatagg gagcaacgtg ccgggcaaag aagcagtgac
     6541 aaagagctga ggaatggacg aagagcacac gggcggtcac ggggaaactg ccggcgaata
     6601 catccagcat cacctcacga attggcaggt gtgccgcgtc gacgacgctt gggtctggaa
     6661 cagtactgag cacccgacgg tgtgcaaggg caacttctgg gccatcaacg tcgactcgat
     6721 ggctttctcg atcgtgct
//
LOCUS       DATCUD010000432         1687 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18504, whole genome shotgun sequence.
ACCESSION   DATCUD010000432 DATCUD010000000
VERSION     DATCUD010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18504"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1075
                     /locus_tag="VIQ99_06400"
     CDS             <1..1075
                     /locus_tag="VIQ99_06400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182809.1"
                     /translation="ELDELRAHKERFEQICEDAAARATAASNELAAAREQIAGLEAEL
                     KEEREHAESLGELANERREHMTKLQEQLEEAEERYADANWRLGKSLHFERIVKRRKGL
                     VLKLLEALRGKMKANTALKAGLDGLRTFKASSEINQQKLLQRVDALKTELREAHEAVK
                     RHQGGTAASEELANAISRATTLEQRLNTQAELIQTLEADLKKAKLSHKPADDKGGEVE
                     RLTQELGTKNELIARLQADIDDLQKKLAKLRGSESETMRLKAATDKDRSEIDALQREV
                     TQLRDALTRQASNAAAQASGGSSELEAKLKEREQSVTRLMGTVKEHEATIKKLTESSE
                     SWKRKYQFLASDSPESHKSAAEK"
     gene            1091..>1687
                     /locus_tag="VIQ99_06405"
     CDS             1091..>1687
                     /locus_tag="VIQ99_06405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182810.1"
                     /translation="MSATGWFDLPSFFQGRGIDLAALGGAYLVLLASLILTIAAFFAV
                     RRLLLIAPNRSTRDYGIYVSLTLAALLIAIVLENESLPSGAATLHYVAVPQLLLLLAL
                     HLAIWYRQDPWLIALGAGAVTATIGVGALLGLTTDLLGPAYGIVLLLLAALLGFLWQK
                     AVSTQRGFVTASSIYVRSKEMLDASTSPQKPWLGLAQWA"
BASE COUNT          333 a          534 c          565 g          255 t
ORIGIN      
        1 agagctcgat gagctgcgag cgcacaagga acgattcgag cagatctgcg aagacgcggc
       61 ggctcgcgct accgcggcat cgaacgagct ggcggccgct cgcgagcaga tcgcggggct
      121 cgaagctgag ctcaaggaag agcgtgagca cgcggagagc ctgggcgagc tcgccaacga
      181 acgccgcgag cacatgacga agctccagga gcagctcgag gaagccgagg aacgctacgc
      241 cgatgcgaac tggcggctcg gcaaatcgct gcacttcgaa cggatcgtca agcgccgcaa
      301 agggctcgtg ctgaagttgc tcgaagccct gcgcggcaag atgaaggcca acaccgcgct
      361 caaagcgggt ctcgatgggc tacgcacgtt caaggcttcg tccgagatca accaacagaa
      421 gctgctccag cgcgtggacg cgctgaagac ggagttgcgc gaggcgcacg aggccgtcaa
      481 gcgacaccag ggcggcacgg cggcgtcgga agaactggcc aacgcgatct cgcgcgcgac
      541 gacgctcgag cagcggctga atacgcaggc cgagctgatc cagacgctcg aggccgatct
      601 gaaaaaggcg aagctgtctc acaagcccgc cgacgacaag ggtggcgaag tcgagcggct
      661 gactcaggag ctcgggacga agaacgagct cattgcgcgc ttgcaagccg atatcgacga
      721 cttgcagaaa aagctcgcga agctgcgcgg cagcgagtcg gagacgatgc ggctcaaggc
      781 cgcgacggac aaagaccgca gcgagatcga tgcgctgcag cgcgaggtca cacagctccg
      841 cgacgcgttg acccgccagg ccagcaacgc cgcggcgcag gcgagcggcg gcagctcgga
      901 gctcgaggcc aagctcaagg agcgcgagca gtcggtcacg cgcttgatgg gcacggtcaa
      961 agagcacgag gccacgatca agaagctcac cgagtcgtcg gaatcgtgga agcgcaagta
     1021 tcagttcctc gcctcggatt cgcccgaatc ccataagagc gctgccgaga agtaatcgca
     1081 gcgcacggcc atgtcggcaa ccggctggtt cgatctcccg tcgttctttc agggtcgcgg
     1141 catcgatctc gctgcactcg gcggcgcgta cctggtcctg ctcgcgtcgc tgattctgac
     1201 catcgcggct ttcttcgccg tgcgccggct gctcctgatc gcgccgaacc gcagcacccg
     1261 tgactacggc atctacgtgt ccttgacgct cgcggcgttg ttgatcgcga tcgttctcga
     1321 gaacgaatcc ctgccttccg gggccgcgac gctgcactac gtggcagtgc ctcagctcct
     1381 attgttgctg gcgctgcacc tcgccatctg gtaccggcaa gacccatggc tgatcgcgct
     1441 cggggccggg gccgtcacgg ccacgatcgg cgtgggcgcc ctgctcggcc tcacgacgga
     1501 cttgctgggc cccgcctatg gcatcgtgct gttgttgctg gcggccctgc tcggctttct
     1561 gtggcagaag gccgtgtcga cgcaacgggg gttcgtgact gcgagctcga tctacgtccg
     1621 ctcgaaggag atgctcgacg catcgacgtc gccgcaaaaa ccctggctcg ggctagcgca
     1681 gtgggcg
//
LOCUS       DATCUD010000433         2823 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_4513, whole genome shotgun sequence.
ACCESSION   DATCUD010000433 DATCUD010000000
VERSION     DATCUD010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2823
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4513"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..1127
                     /locus_tag="VIQ99_06410"
     CDS             150..1127
                     /locus_tag="VIQ99_06410"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020515786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEY9182811.1"
                     /translation="MAQLTYRDAVAAGIAQEMRRDPNVVLLGEDVAAAGGVFKATVGL
                     LDEFGAKRVKDTPISEQAIVGAAMGAAMTGLRPIVDLMFSDFFAVTWDIVANQIAKTR
                     YMTDGQVTLPLVIRSANGAGSRFGAQHSQSVENWSMMIPGLKIVAPAFPGDVKGLLAA
                     AIRCDDPVMFFEQKSLYATKGEVPDGEHVIELGKANVLREGKDVTIVALALMVPRALK
                     AAEMLKEQHGIDATVIDLRSLVPLDTQTILREVAKTGRLVTVEENPRLCGWGAEIASI
                     VAEELFWDLDGPIVRVTTPHVPLAAANNLEDAQLPTPERIVAGVRQLVD"
     gene            1143..2516
                     /locus_tag="VIQ99_06415"
     CDS             1143..2516
                     /locus_tag="VIQ99_06415"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HEY9182812.1"
                     /translation="MNVLMPQLGETVTEGTVAHWHKKVGDTVAADEIILDIETDKVSM
                     EIPAPIAGVITEIRVKEGTTVEVGTVLAVIGSGASAGTEAPAAKPAAAPTAPAAVAAP
                     AQPSPPPSHAASASGDTVKQPTFGIAAVAQLGAVSRDGHQRLSPAVRRLAAEYRLDLA
                     TVQGSGRNGRITRRNVLEFIHGQQNAPTPPRAPVAAAPAPAATSSAPAARAPAPTPAA
                     PPPAGAKTLPLTRIRKLTAEHMVRSKATSPHVLQAVEVDYHRVDIVRKSVRDAWKAKH
                     GHSLTYLPFIANAVCRALEDFPNLNSSVHGDSLVLHPSVNLGIAVDLGAEGLVAPVIK
                     NADRMSVAQLADAIAEIAQRSRAGKLKPDDFQGGTYTLSNSGTFGTLITAPIINQPQV
                     AILSTDGVRKKPVVVETSEGDSIAIRPVGVLAQSFDHRAVDGAYSAAFLDRVRKIIET
                     SNWVVEV"
     gene            2526..>2823
                     /locus_tag="VIQ99_06420"
     CDS             2526..>2823
                     /locus_tag="VIQ99_06420"
                     /inference="COORDINATES: protein motif:HMM:NF013641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9182813.1"
                     /translation="MRKHTLGWVGAGGRMGFAMAKRLLAAGHEVSVYNRTRSKVEPLA
                     EHGAKIVDSLSELRGLDIVFTTVSASDDLIAVCTGRDGLLDKSGSPKLIIDCSSV"
BASE COUNT          492 a          977 c          946 g          408 t
ORIGIN      
        1 ctcgagatgg ggatcaacgt cgccgagatc gagaagatcg aggcggaaac gaacgcagag
       61 atcgatcgcg ccacggagat cgcgcgcaac gcgccgccgc cgccgctcga gctcgcagac
      121 aaggacgttt gggctgacgg aggctcggca tggcgcaact aacctatcgt gacgcggtcg
      181 ctgccggcat cgcccaagag atgcgccgcg acccgaacgt cgtgctgctc ggcgaggacg
      241 tcgccgcggc cggcggcgtg ttcaaggcca ccgtcggcct gctcgacgag ttcggcgcga
      301 aacgcgtcaa ggacacgccg atctcggagc aagcgatcgt cggtgccgcg atgggcgccg
      361 cgatgacggg cttgcggccg atcgtcgacc tgatgttctc ggactttttc gccgtgacgt
      421 gggacatcgt cgcgaatcag atcgcgaaga cgcgctacat gaccgacggc caggtgacgc
      481 tgccgctcgt gatccgctcc gcgaacggcg ccggctcacg cttcggcgcg caacactctc
      541 agagcgtcga gaactggtcg atgatgattc cgggcctcaa gatcgtcgcg ccggcattcc
      601 ccggcgacgt gaagggtttg ctcgcggcgg ccatccgctg cgacgacccg gtgatgttct
      661 tcgagcagaa gtcgctgtac gcgacgaaag gcgaagtccc cgacggcgag cacgtgatcg
      721 agctcggtaa ggcgaacgtg ctgcgcgaag gcaaggacgt cacgatcgtc gcgctcgcgc
      781 tgatggtgcc gcgtgccctg aaggccgccg aaatgctcaa ggagcaacac ggcatcgacg
      841 caaccgtgat cgacctgcgc tcgctcgtgc cgctcgacac gcaaacgatc ctgcgcgagg
      901 tcgcgaagac cggccggctc gtaacggtcg aggagaaccc aaggctctgc ggctggggcg
      961 ccgagatcgc gtcgatcgtg gccgaggagc tgttctggga tctcgacggc ccgatcgtgc
     1021 gcgtgaccac gccgcacgtg ccgctcgcgg ccgcgaacaa tctcgaggac gcacagctgc
     1081 cgacgccgga gcgcatcgtc gccggcgtgc gccagctcgt cgactagctc ggagtgggat
     1141 cgatgaacgt attgatgccg cagctcggcg agaccgtcac cgagggcacc gtcgcccatt
     1201 ggcacaagaa ggtcggtgat accgtcgccg ccgatgagat catcctcgac atcgagacgg
     1261 acaaggtctc gatggagatt ccggcgccga tcgccggcgt gatcaccgaa attcgcgtca
     1321 aggaaggcac gaccgtcgag gtcggcaccg tgctcgccgt gatcggcagc ggcgcgagcg
     1381 ccggcaccga agcgccggcc gcgaaaccgg cggccgcgcc cacagcgccg gcagctgtcg
     1441 ccgctcctgc gcagccgtcg ccgccgccgt ctcacgccgc gagcgcgtcc ggcgacacgg
     1501 tcaagcaacc cacgttcgga atcgcggccg tcgcgcagct cggagcggtg agtcgcgacg
     1561 gccaccaacg tttgtcgccg gccgtgcgcc gcctcgcagc cgagtaccgc ctcgacctgg
     1621 ccaccgtaca gggctcgggc cgcaacgggc gcatcacgcg ccgcaacgtg ctcgagttca
     1681 ttcatggcca gcagaacgcg cccacgccgc cccgcgcgcc ggtcgcagcg gccccggctc
     1741 cggccgcgac gtcgtccgct ccggcggctc gcgccccggc gcccacgccc gcggccccgc
     1801 cgccggccgg agcgaagacg ctgccgctca cgcggattcg caagctcacg gccgagcaca
     1861 tggtccgctc gaaggccacg agcccccacg tgctgcaagc cgtcgaggtc gactaccatc
     1921 gtgtcgacat cgtgcgtaag tccgtgcgcg acgcctggaa agcgaagcac gggcactcgc
     1981 tgacgtacct gccgttcatc gcgaacgccg tgtgccgcgc gctcgaggat ttcccgaact
     2041 tgaactcgag cgtgcatggc gattcgctcg tgctgcaccc cagcgtgaat ctcggaatcg
     2101 cagtcgatct cggcgccgaa ggcctcgtcg cgcccgtcat caagaacgcc gaccgcatga
     2161 gcgtcgcgca gctcgccgat gcgatcgcag aaatcgcgca gcgctcgcgc gccggcaagc
     2221 tgaagcccga cgacttccaa ggcggcacgt acacgctgtc gaactccggc acgttcggca
     2281 cgttgatcac ggcgccgatc atcaatcagc cgcaagtcgc gatcctgtcg acggacggcg
     2341 tgcgcaagaa gccggtcgtc gtcgagacca gcgagggcga ctcgatcgcg atccgcccgg
     2401 ttggcgtgct cgcgcagtcg ttcgatcacc gcgccgtcga cggcgcgtac tcggccgcgt
     2461 tcctcgaccg cgtgcgcaag atcatcgaaa cgagcaactg ggtcgtcgaa gtctgaggtc
     2521 ggcacatgcg taagcacacg ctgggttggg tcggcgcggg cggccgcatg ggcttcgcga
     2581 tggcgaagcg gctgctcgcg gccggccatg aggtcagcgt ctacaaccgc acgcgcagca
     2641 aggtcgagcc gctcgccgag cacggcgcga agatcgtcga tagcttgagc gagctgcgcg
     2701 gcctcgacat cgtgttcacg acggtatccg catccgatga cctgatcgcc gtctgcacgg
     2761 gtcgcgacgg cctgctcgac aagagcggtt cgccgaagct catcatcgat tgctcgagcg
     2821 tct
//
LOCUS       DATCUD010000434         2570 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11203, whole genome shotgun sequence.
ACCESSION   DATCUD010000434 DATCUD010000000
VERSION     DATCUD010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2570
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11203"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..430)
                     /locus_tag="VIQ99_06425"
     CDS             complement(<1..430)
                     /locus_tag="VIQ99_06425"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182814.1"
                     /translation="MPEPPQVPGAAAVADYVRGSDWPTANRDLGGLRYSPLREITVTN
                     VDELRQAWAYPLGGAEGAASLGSELTPIVVGGVLYATAADRVVALEADSGEEIWRFMS
                     ERDAPSRRGLTYWPGDAAMAARIFFTAGRKLVALDAATGQR"
     gene            590..1288
                     /locus_tag="VIQ99_06430"
     CDS             590..1288
                     /locus_tag="VIQ99_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012235784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEY9182815.1"
                     /translation="MQSVETVPSYTPVADLGVESRSTFIWRTYGHVAAAILLFAAIES
                     YLFSNGLAQPLAQRMLGFNWLLILGAFMIVGWLATHVAHTVQSKPLQYVALAGFVAAE
                     AVIFVPLLALAMAAQPGIVESAVGVTLLGTAGLTAVAFITRKDFSFLRGILVWGGILA
                     LVAIVASVLFGFEMGTWFSVAMIGFAGAAVLYDTSNILHHYPEDRYVGAALALFASIA
                     LMFWYVLRLFMSRD"
     gene            1425..1985
                     /locus_tag="VIQ99_06435"
     CDS             1425..1985
                     /locus_tag="VIQ99_06435"
                     /inference="COORDINATES: protein motif:HMM:NF016176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HEY9182816.1"
                     /translation="MINKLALQPFALAAGLAFTAGAFAAPWTVVPETSSVAFVGTQQG
                     TKFNGRFQTFTATIDLDAADPTKGSIVGTVQLDSVNTRDHDRDASLLDKDWFNAKEFP
                     QAKFESQKIEKAADGSYVANGQLTLKGQTKPIAMKFTLTGSGAATQFAGTMSINRFDF
                     NVGEGWNDTSWVAQDVAVEVKLDLKR"
     gene            complement(2022..>2570)
                     /locus_tag="VIQ99_06440"
     CDS             complement(2022..>2570)
                     /locus_tag="VIQ99_06440"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182817.1"
                     /translation="ADPSIKIAGKVGHRGSFDMRWSDLKGGTAFSRAAWNGDIEVMRL
                     LLAHGADPGIVTEKGETALLLLAGAGWPLGQGYIRSEQEITAALDLLVEEFGMDVNAA
                     TTEGITPVICAIFKGDNFVVQYLVDHGARLDVKDNAGRSVLTWAQGIAANEGQPPRPQ
                     PETEKLVRELMAKQGITIAMAR"
BASE COUNT          431 a          890 c          806 g          443 t
ORIGIN      
        1 ccctttgacc cgtcgccgca tcgagcgcaa cgagcttgcg gcccgccgtg aagaaaatac
       61 gcgcggccat cgccgcgtcg ccgggccagt aggtcaaacc ccgccgcgac ggcgcgtcgc
      121 gctccgacat gaagcgccag atctcttcgc cgctgtcggc ctcgagtgcg actacccgat
      181 ccgcggcggt cgcgtacaac acgccgccga cgacgatcgg cgtgagctcc gagccgaggg
      241 atgcagcgcc ctctgcgccc ccgagcgggt acgcccacgc ctgccgcagc tcgtcgacgt
      301 tcgtgaccgt gatctcgcgc agcggcgaat accgcaagcc gccgagatcg cgattcgcgg
      361 tgggccaatc ggagccacgg acataatccg cgacggcggc ggcaccgggc acctgcggcg
      421 gttccggcac gggggactcg cagccggcca ctacgaccgc agcgagcgct gcgatggctc
      481 tggctgcgcc tgacatcaca cggacccccg accgattcgg aattcgattc taggggagcc
      541 ccaacggcgg tgctagaatt ggcgctcggg aacacaggag agcgttgcca tgcaatccgt
      601 cgagaccgtg ccgagttaca cgcccgttgc agacctcggc gtcgaatccc gctccacgtt
      661 catttggcgc acctacggcc acgtcgccgc ggccatcctg ctgttcgcgg ccatcgagtc
      721 gtatctgttc agcaacggcc tcgcgcaacc gctcgcgcag cggatgctcg gcttcaactg
      781 gctgttgatc ctcggcgcct tcatgatcgt cggctggctc gcgactcacg tcgcgcacac
      841 cgtgcagtcg aagccgctcc aatacgtcgc gctcgcgggc ttcgtcgccg ccgaggccgt
      901 gattttcgtg ccactgctcg cgctcgcgat ggcagctcag cccggcatcg tggagagcgc
      961 agtcggcgtc acactgctcg gcacggcggg tctcacggcc gtcgcgttca tcacgcgcaa
     1021 ggatttctcg ttcctgcgcg gcatcctggt ctggggcggc atcctggcgc tggtcgcgat
     1081 cgtcgcgagc gtgctgttcg gcttcgagat gggaacgtgg ttctcggtcg cgatgatcgg
     1141 cttcgcgggc gcggcggttc tttacgacac gtcgaacatc ctccaccact atccggagga
     1201 ccgctacgtc ggcgcagcgc tcgcgttgtt cgcgtcgatc gcgttgatgt tctggtacgt
     1261 gctgcggctg ttcatgtcgc gcgactgagc acggctgaac gcacgctgaa cgcggacccc
     1321 acacctctag aacggtcaag tacggagaat gcgcactgcc gttcgcggca gccatcgcat
     1381 acaatttcgc caaagcctca ttcgagagac tccgggatac acacatgatc aacaagcttg
     1441 ctttgcagcc cttcgcgctc gccgccggcc tcgcgttcac cgcaggcgca ttcgcggccc
     1501 cgtggaccgt ggtcccggag acgagctcgg tggcgttcgt cggcactcaa cagggcacga
     1561 agttcaacgg ccggttccag acgttcacgg ccacgatcga cctcgacgcc gccgacccca
     1621 cgaagggcag catcgtcggc accgtgcagc tcgactccgt gaacacacgc gaccacgatc
     1681 gcgacgcgtc gctgctcgac aaggactggt tcaacgccaa agagtttccg caggcgaagt
     1741 tcgagtcgca gaagatcgag aaagccgcgg acggttcgta cgtcgcgaac ggtcagctga
     1801 ccctgaaggg ccagaccaag ccgatcgcga tgaagttcac gttgaccggc tccggtgcgg
     1861 cgacgcagtt cgccggcacg atgtcgatca accgcttcga cttcaacgtc ggcgagggct
     1921 ggaacgacac gagctgggtg gcgcaggacg tcgcggtcga ggtcaagctc gacctcaagc
     1981 gctagtcgcg tcggttcctc acgccgcgca gacggcgccg tctaccgcgc catcgcgatc
     2041 gtgatgccct gcttcgccat cagctcgcga acgagcttct cggtttcggg ttgcggtcgc
     2101 ggcggctgac cttcgttcgc agcgatgcct tgcgcccacg tgagcacgga tcggcccgcg
     2161 ttgtccttca cgtcgagacg cgcaccgtgg tcgacgaggt actgcaccac gaagttgtcg
     2221 cccttgaaga tcgcgcagat cacgggcgtg atgccctcgg tcgtcgccgc gttcacgtcc
     2281 atgccgaatt cttcgacgag caggtcgagc gcggccgtga tctcttgctc cgagcggatg
     2341 tagccctggc ccagcggcca gccggcaccc gccaacagca gcaacgcggt ctcacccttt
     2401 tcggtgacga ttccgggatc ggcgccgtgc gcaagaagca ggcgcatgac ctcgatatct
     2461 ccgttccacg ccgcgcgcga gaacgcggtc ccgcccttga gatcggacca acgcatgtcg
     2521 aacgagccgc gatgaccgac cttgcccgcg atcttgatcg atggatccgc
//
LOCUS       DATCUD010000435         4508 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60765, whole genome shotgun sequence.
ACCESSION   DATCUD010000435 DATCUD010000000
VERSION     DATCUD010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4508
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60765"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..960
                     /locus_tag="VIQ99_06445"
     CDS             <1..960
                     /locus_tag="VIQ99_06445"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9182818.1"
                     /translation="ASPAPPPPSTSATSTARTLLVEGPEGTVSAPPPEAPSFDLNALQ
                     AGDMIEGRYKFIQKIGKGAFGTVVLVEDTVVEERLILKFLNANVSSDEEMLKRFVHEL
                     RYSRRITHKNVIRIYDFLYVGGSYAISMEYFPSHTLGAEIANEKPMPPKKAVGYGMDI
                     CIGMSVAHQQGIIHRDLKPANILINDTGLLKIVDFGVAAAAKSGDTQLTKTGYVIGSP
                     KYMAPEQILGKKVDERADIYSLGVIMYEMLAGNPPYSRGDHMSVMYQHVQGKAQPLNE
                     ANPKVPREIADVVTKTMQVDKLKRYASMEELRVALEAASGSIR"
     gene            968..2107
                     /locus_tag="VIQ99_06450"
     CDS             968..2107
                     /locus_tag="VIQ99_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEY9182819.1"
                     /translation="MARIDAFLKLGLAQGCSDIHLAVGIPPMLRLHGDLMPIKFRDLG
                     DTELEGYVDEILSDSQRERFRHKHDIDFSYVSTDGGRFRVNVYHKATGVGATFRNIPS
                     VVPSLDSLNLPPILAKFCDLHQGMVLVTGSTGTGKSTTLAAMIDHINTTSSSNIISLE
                     DPIEFVHSSKRSQIIQRELGTHIPSFAEGVRASLREDPDVILVGELRDGETISMAMTA
                     AETGHLVLGTLHTTSAVKSIDRIIDALPGDQREQTKSFLANSLHAVVTQNLIKTPDGR
                     GRRAVVEVMVMNRAIAKLIQTDQTHQIPAQLQTGKEQGMQLMDQALLNALSAKLLDPD
                     DAYRYATDRKKFERFVTDTTVLPSGVGAAPSTAPGAAAGKTAGTA"
     gene            2121..3179
                     /locus_tag="VIQ99_06455"
     CDS             2121..3179
                     /locus_tag="VIQ99_06455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043107 - type IV pilus-dependent motility
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEY9182820.1"
                     /translation="MSMINDFLRSMYMRKGSDLHVIAGDPPRMRVHGDLITLQNQRLE
                     PEELRSELFGIMSEQSIEQFNKHDSADFAHSIPDVARFRVNVFRHLNGIGAVFRGIPS
                     KALTLEELKMPKALHELASATRGLILVTGKTGSGKSTTLAAVIDAINSRIKGHILTIE
                     DPIEFVHQRKLCLMSQREVGVHSPSFASALHSALREDPDAILVGELRDLETMSIAMTA
                     AEMGVLVMGTLHTNGAAATIDRVVNIFPAGKQDHVRNMLSTSLRGIVSQQLLKRKDGT
                     GRAVALEILINTSAAANLIRQGKLEQLENVMQSSGREGMCTMDGSIKKLYDDGQITGE
                     EAYLNAYDKAKFEALKDA"
     gene            3307..>4508
                     /gene="metG"
                     /locus_tag="VIQ99_06460"
     CDS             3307..>4508
                     /gene="metG"
                     /locus_tag="VIQ99_06460"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002683915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEY9182821.1"
                     /translation="MSQRTILVTSALPYANSSLHLGHVLEYVQTDVWVRFQRLRGVRC
                     WYVCASDAHGTPTMLRAEQEGIAPETLIERVSAEHRRDFSTYRISVDNYLTTHSPENE
                     ELTAELYRRLVAGGFVSRKTIKQAYDAERQMFLPDRYVKGTCPNCGAADQYGDSCENC
                     GATYSPTELKDAVSTLSGTPPTVRESEHLFLKLGAFEDELKRWIPGRVDPALARKLDE
                     WFKTGLKDWDISRDAPYFGFKIPGEREKYFYVWFDAPIGYMASFLNLCRKKGLDFDEF
                     WGADSPHELYHFIGKDIPYFHALFWPAMLSGAGFRKPSALFVHGHVTVDGQKLSKRRG
                     NFITAQKFAEHLDPDYLRYYYASKLGPTIDDLDLNLADFVAKVNSDLVGKLVNIASRC
                     AGFVHKLNG"
BASE COUNT          912 a         1479 c         1388 g          729 t
ORIGIN      
        1 gcttctcccg cgcctccgcc gccgtcgacc tccgcaacgt cgaccgcgcg cactctgctc
       61 gtcgaaggcc ccgagggaac ggtctccgca ccgccaccgg aagcgccgtc gttcgacctg
      121 aatgcgctcc aggccggcga catgatcgag ggccggtaca agttcatcca aaagatcggc
      181 aagggcgcgt tcggtaccgt ggtgctcgtc gaggacacgg tcgtcgagga acgcctgatc
      241 ttgaagttct tgaacgcgaa cgtctcctcg gacgaggaga tgctgaagcg cttcgtgcac
      301 gagctgcgct actcacgccg aatcacgcac aagaacgtga ttcgcatcta cgacttcctc
      361 tacgtcgggg gcagctacgc gatctcgatg gagtattttc cgtcgcacac gctcggcgcg
      421 gagatcgcga acgagaaacc gatgccgccg aagaaggcgg tcggctacgg catggacatc
      481 tgcatcggca tgagcgtcgc tcaccagcaa ggcatcatcc atcgcgacct gaagcccgcg
      541 aatatcctga tcaacgacac cgggctcctg aagatcgtgg acttcggcgt cgctgccgct
      601 gcgaagagcg gcgatacgca gctcacgaag acgggctacg tgatcggctc gccgaagtac
      661 atggcgcccg agcaaatctt gggcaagaag gtcgacgagc gcgccgacat ctatagcctc
      721 ggcgtcatca tgtacgaaat gctggccggc aacccgccct acagccgcgg cgatcacatg
      781 tccgtgatgt atcaacacgt ccagggcaag gctcagccgc tgaacgaggc gaacccgaag
      841 gtcccgcgcg agatcgcgga cgtcgtcacg aaaacgatgc aggtcgacaa gctcaagcgc
      901 tacgcgtcga tggaagagct tcgggtcgcg ctcgaagcgg cgtccggttc gatacggtag
      961 gacaccgatg gcacgcatcg acgcgttctt gaagctcggc ctcgcgcaag gctgctcgga
     1021 catccacctc gcggtcggga ttccgccgat gctgcggttg cacggcgacc tcatgccgat
     1081 caagttccgt gacctcgggg ataccgagct cgaaggctac gtggacgaga tcttgagcga
     1141 ctctcaacgc gagcgctttc ggcacaagca cgacatcgat ttctcgtacg tgagcacgga
     1201 tggcggccgc ttccgcgtga acgtgtatca caaggcgacc ggcgtcggcg caacgttccg
     1261 gaacatccca agcgtcgtcc cgagcctgga cagcctgaac ctgccgccga tcctggcgaa
     1321 gttctgcgat ctgcaccagg gcatggtgct cgtcacgggc tccacgggta cgggcaagtc
     1381 cacgacgctc gccgcgatga tcgatcacat caacacgacg agcagctcga acatcatcag
     1441 cctcgaggac ccgatcgagt tcgtgcacag cagcaaacgc agccagatca tccagcgcga
     1501 gctcggcacg cacatcccga gcttcgccga gggcgtccgc gcctcgctgc gcgaagaccc
     1561 cgacgtcatc ctggtcggcg agcttcgcga cggcgagacg atcagcatgg ccatgacggc
     1621 cgccgagacc gggcacttgg tgctcggcac gcttcatact acgagcgccg tgaagtcgat
     1681 cgaccgaatc atcgacgcgc tacccggcga tcaacgggag cagaccaaga gcttcctcgc
     1741 gaacagcctg cacgcggtcg tgacgcagaa cttgatcaag acgccggacg gccgcggccg
     1801 ccgcgcggtc gtcgaggtca tggtcatgaa ccgcgcgatt gcaaaactga ttcaaaccga
     1861 ccagacgcac caaattccgg cgcagctgca aaccggcaag gagcagggca tgcagctcat
     1921 ggaccaggcg ttgctgaatg cgctgagcgc gaaactgctc gacccggacg acgcatatcg
     1981 gtacgcgacc gaccgcaaga agttcgagcg cttcgtcacc gacaccaccg tgctgccgag
     2041 cggcgtggga gccgcaccga gcacggcccc tggcgcggcc gcgggaaaga ccgcaggcac
     2101 ggcttgagcg aggcaccgcg atgtcgatga tcaacgattt tctgcgcagt atgtacatgc
     2161 gcaagggctc ggacctgcac gtgatcgcgg gcgatccacc gcgcatgcgt gtccacggcg
     2221 atctgatcac gctgcagaac cagcgcctcg agcccgagga gttgcggtcg gagctgttcg
     2281 gcatcatgtc ggaacagtcg atcgagcagt tcaacaagca cgattcggcc gacttcgccc
     2341 actcgatccc cgacgttgcg cgtttccgcg tcaatgtgtt ccgccacttg aacgggatcg
     2401 gcgccgtgtt ccgaggcatc ccctcgaaag cactgacgct cgaagagctg aagatgccga
     2461 aggctctgca cgagctcgct tccgcgacgc gcggcctgat cctcgtcacg ggcaagaccg
     2521 gctccggcaa atcgaccacg ctcgcggccg tcatcgacgc gatcaacagc cgcatcaagg
     2581 gccatatcct cacgatcgag gacccgatcg agttcgtgca tcagcgcaag ttgtgcctga
     2641 tgagccagcg cgaagtcggc gtgcatagcc cctcgttcgc aagtgcgttg cactctgcgt
     2701 tgcgcgagga tcccgacgcg atcctggtcg gcgagctccg cgacctcgag acgatgagca
     2761 tcgcgatgac cgcggcggag atgggcgtgc tcgtcatggg caccctgcac acgaacggcg
     2821 cggcggcgac gatcgaccgc gtcgtgaaca tcttcccggc cggcaagcag gaccacgtcc
     2881 gcaacatgct ttcgacgtcg ctgcgaggca tcgtctcgca gcaactgctg aagaggaagg
     2941 acggcacggg ccgcgcggtg gcactcgaga tcctgatcaa cacctcggcc gccgcaaacc
     3001 tgattcggca gggcaagctc gagcagctcg agaacgtcat gcaatcgagc ggccgcgagg
     3061 gcatgtgcac gatggacggc tcgatcaaga agctctacga cgacggccag atcaccggcg
     3121 aagaggcgta cttgaacgcg tacgacaagg ccaagttcga ggcgctgaaa gacgcctgac
     3181 gagcccgagc tggcgttgcc ctcgtcggca actgcgcctg cgttgctcta ccgcgggcct
     3241 ccccgcccgc ggcataatgg cgcccgcggg tagcaacgga cgctgcccaa cttgggagcc
     3301 ccgcagttga gccagcgtac catcctcgtc acgagcgccc tgccgtacgc taatagctcc
     3361 ctgcatttgg gccacgtcct cgagtacgtg cagaccgacg tgtgggtgcg gtttcagcgc
     3421 ctgcgcggtg tccggtgctg gtacgtatgc gcgagcgacg cgcacggcac gcctacgatg
     3481 ttgcgcgccg agcaggaggg catcgcgccc gagacgctga tcgagcgcgt cagcgccgag
     3541 caccgccgcg atttctcgac ctaccgaatc agcgtcgaca actacctcac tacacactca
     3601 cccgagaacg aggagctgac ggccgagctc tatcggcgct tggtcgcggg cggattcgtg
     3661 agccgcaaga cgatcaagca agcctacgac gcggaacggc agatgttcct gcccgaccgc
     3721 tacgtgaaag gcacgtgccc gaattgcggc gccgcggacc agtacgggga ctcatgcgaa
     3781 aattgtggcg cgacctattc cccgaccgag ctcaaggacg ccgtgtcgac actgtccggc
     3841 acaccaccga ccgtccgcga gtccgagcac ttgttcctga agctcggcgc cttcgaggac
     3901 gagctaaaac gttggatacc gggccgcgtc gatcccgcgc tcgcgcgcaa gctcgacgag
     3961 tggttcaaaa ccggattgaa ggactgggac atctcgcgcg atgcgccgta cttcggcttc
     4021 aagatccccg gcgagcgcga gaagtatttc tacgtctggt tcgacgcgcc gatcgggtac
     4081 atggcgagct tcctgaacct gtgccgcaag aaagggctcg acttcgacga gttctggggc
     4141 gccgacagcc cgcacgagct ctaccacttc atcggcaagg acatcccgta cttccacgcg
     4201 ttgttctggc ccgcgatgct ctccggcgcg ggcttcagga agccgagcgc gttgttcgtg
     4261 cacggccacg tcacggtcga cggccagaag ctatcgaagc gtcgcggcaa cttcattacc
     4321 gcgcagaagt tcgccgagca cttggacccc gactacttgc gttactacta cgcgtcgaag
     4381 ttgggaccga cgatcgacga tctcgatttg aacctcgcgg acttcgtggc caaagtcaac
     4441 tccgacctgg tcggtaagct cgtcaacatc gcgagccgct gcgcaggctt cgtccacaag
     4501 cttaacgg
//
LOCUS       DATCUD010000436         2605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54018, whole genome shotgun sequence.
ACCESSION   DATCUD010000436 DATCUD010000000
VERSION     DATCUD010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54018"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1221
                     /locus_tag="VIQ99_06465"
     CDS             <1..1221
                     /locus_tag="VIQ99_06465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182822.1"
                     /translation="QTLEAALRALDEAEAKLRAYRADETGIRRLNESVQRSEERFRML
                     AAGVPNHLLFLDRDLRILFANDVFLEAAGWSTETAVGCHISDILGVERFIERQPYYER
                     ALAGETVSYESTGAAGNENGYFRFSYRPSVDPEGNVRGIFSMATDITERRKVELELEA
                     KQAELLRSNKDLEQFAYVASHDLKAPLRAVELLVQWITEGLAGYDANNVQENLGLLTK
                     RTQRLNRLLDDLLAYSRAGRKVGAHRQTDSHALVLDIAQMLNPPPGFSVSVEGELPKF
                     KTHPIPLEQVLRNLISNAVKHHPGPEGRVVVSCADTGEFYVFAVADDGEGIPMQYAQR
                     VFEMFQTLKPRDQVEGSGMGLAIVSRIVQWQGGRVWFEPAPSGRGTVFKFQWKKQQPV
                     AVKVETQACETARS"
     gene            1200..1619
                     /locus_tag="VIQ99_06470"
     CDS             1200..1619
                     /locus_tag="VIQ99_06470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008681162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9182823.1"
                     /translation="MRNSKVVTILLVEDDEIDCKALKWAFEKLKIANPLVIARDGVEA
                     WDMLPELPRPYLIISDINMPRMNGIELLRKIRQSPEYRDSIVFMLTTSNDEQDKIDAY
                     NLNVAGYMLKSDMGTSFTRAIGLIENYWKVVEFPGQD"
     gene            1702..2202
                     /locus_tag="VIQ99_06475"
     CDS             1702..2202
                     /locus_tag="VIQ99_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182824.1"
                     /translation="MRAFAEWLSGTTPSVAIQSTLWFIRLLQATHLVTAGVACVSGIM
                     IALRALEWHRTDQPFALVWRRFAPWLASSMTVMIATGIAQTLGDPVREFTATSYWVKL
                     ALVLICIAGTWSLARTVRASSATGLGAPAKLFAAALIAFWLAIVLLGRMIGYDAAIWG
                     DLSLRT"
     gene            2199..>2605
                     /locus_tag="VIQ99_06480"
     CDS             2199..>2605
                     /locus_tag="VIQ99_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182825.1"
                     /translation="MSNESVLESIETSAVATWMRETLPAMQVVEATHVLAAVVMLGTV
                     LIVDLRLLGLTDSSRGFTRIGRETLPFTWIAFAIAAVTGSLMFTTGAVTYFANAAFQL
                     KALALLAAGLNMALFQLVTARGIAAWDTGNPAPR"
BASE COUNT          475 a          812 c          855 g          463 t
ORIGIN      
        1 cagacgctcg aggccgcgtt gcgcgcctta gacgaagccg aagccaagct gcgcgcctac
       61 cgagccgacg agaccggcat ccgacgcctc aacgaaagcg tgcagcgcag cgaggagcgc
      121 ttccgcatgc ttgccgcagg cgtgccgaac catctgctgt tcctcgatcg cgatctgcgg
      181 attctgtttg ccaacgacgt gtttctcgag gcggcgggtt ggtcgaccga gacagccgtc
      241 gggtgccaca tctccgatat cctcggtgtc gagcggttca tcgagcggca accctactac
      301 gagcgtgctc tcgcaggcga aacggtcagc tacgaatcaa cgggcgctgc gggcaacgaa
      361 aatggctact tccgcttctc gtaccgcccg agcgtcgacc ccgaggggaa cgttcgcggc
      421 atcttctcga tggccaccga catcacggag cggcggaaag tcgagctcga gctcgaagcc
      481 aagcaggccg agctgctccg ctccaacaaa gatctcgagc agttcgccta cgtcgcgtcc
      541 catgacttga aggccccgtt gcgcgcagtc gagttgctgg tgcagtggat caccgagggt
      601 ctggccggct acgacgcgaa caacgtccaa gagaatctcg ggctactcac gaaaaggacg
      661 cagcgcctga atcggttact cgacgacttg ttggcctact cgcgcgcagg ccgcaaagtc
      721 ggcgcccatc gtcagaccga cagccatgcg ctcgtgctcg acatcgcgca aatgctgaat
      781 ccacctccgg ggttttcggt ctcggtcgaa ggagagctgc cgaaattcaa aacgcatccg
      841 ataccgctcg agcaggtgct gcgcaatctg atcagcaacg cggtcaagca tcatccgggc
      901 ccggagggtc gcgtcgttgt ctcctgcgcg gacacgggcg agttctacgt cttcgccgtg
      961 gcggacgacg gcgaaggcat accgatgcag tacgcccagc gggtgttcga gatgttccag
     1021 acgctgaagc cgcgggatca agtcgaaggc agcggcatgg gtctcgcgat cgtgagccga
     1081 atcgtgcaat ggcaaggcgg ccgggtgtgg ttcgagccgg cgccgtcggg ccgcggcacc
     1141 gtgttcaagt tccagtggaa gaagcagcaa ccggtggccg tgaaggtgga gacgcaggca
     1201 tgcgaaacag caaggtcgtg acgatcctgc tcgtcgagga cgacgagatc gactgcaagg
     1261 ctctgaagtg ggcgttcgag aagctgaaga tcgccaatcc actggtaatt gcgcgcgacg
     1321 gagtcgaagc ctgggacatg ctgccggagt tgccgcggcc gtacctgatc atctccgaca
     1381 tcaacatgcc gcggatgaac ggcatagagc tgctgcgcaa gatcaggcag agcccggagt
     1441 accgtgattc gatcgtgttc atgctgacga cctcgaacga cgaacaagac aagatcgacg
     1501 cgtacaacct gaacgtcgcg ggatacatgc tgaagtccga catgggcacg agcttcacgc
     1561 gcgcgatcgg gctgatcgag aactactgga aggtcgtgga gtttccgggc caagactgag
     1621 cagcgaccgg caccgctgtg ggcgggcgac gcgtcgaaac tccggcgctg gcggtcggca
     1681 tccattagga tctcgagtcg cgtgcgcgcc ttcgccgaat ggctgtccgg aaccaccccg
     1741 agcgtcgcga ttcaatcgac gctctggttc attcgcctgc tccaggcgac gcacctcgtg
     1801 acggccggtg tggcttgcgt gtccgggatc atgatcgcac tgcgcgcgct cgagtggcac
     1861 cgcactgatc agccgttcgc tctcgtgtgg cgacgtttcg cgccctggct cgcctcgagc
     1921 atgaccgtga tgatcgcgac gggaatcgcg cagacactcg gcgaccccgt ccgcgaattc
     1981 acggcgacct catactgggt caagttggct ctcgtgctga tctgcatcgc gggtacgtgg
     2041 tcgctcgccc gtacggtgcg ggcgtcgtcc gcgaccgggt tgggcgctcc ggcgaagctg
     2101 ttcgctgcgg cgctgatcgc gttctggctg gccatcgtgc tgctcggccg catgatcggt
     2161 tacgacgctg cgatctgggg cgacctttcg ctgcgcacat gagcaacgaa tccgtgctcg
     2221 agagcataga gacgtccgcg gtcgccactt ggatgcgcga gacgctgcct gcgatgcagg
     2281 tcgtcgaggc gacgcatgtg ctcgcggccg tcgtcatgct cggcacggtg ctgatcgtgg
     2341 acctacgtct gctcgggctc accgactcgt cgcgcggatt cacgcgaatc ggccgggaga
     2401 cgctgccgtt cacgtggatc gcgttcgcga tcgcggcggt cacggggtcg ctgatgttca
     2461 cgaccggcgc ggtaacctac ttcgcgaatg cagcgtttca gctcaaggct ctcgcgctgc
     2521 tcgccgcggg gctgaacatg gcgctatttc agctcgtgac cgcgcgcggg atcgccgcct
     2581 gggacaccgg caacccggcg ccgcg
//
LOCUS       DATCUD010000437         3319 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_89534, whole genome shotgun sequence.
ACCESSION   DATCUD010000437 DATCUD010000000
VERSION     DATCUD010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89534"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VIQ99_06485"
     CDS             complement(<1..598)
                     /locus_tag="VIQ99_06485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182826.1"
                     /translation="MTVVSASTIPNHLDFLVMQPDQEHAIVRDLVSAVFAFNAYSEGE
                     PLQISFPMYTDEKVSARGVLGPCVRVTGPSEKLYVLTLRYEVSAHLRAGRAMTLVRDK
                     PVVEAGRNERFTLLSSASKTPTKSIEIARARPLVLSGHSRVIETAGSLGIAIRDEAAF
                     VERGETKVATEGEVDLLGFSDRKTVPVLKWASQVAPRFE"
     gene            complement(621..743)
                     /locus_tag="VIQ99_06490"
     CDS             complement(621..743)
                     /locus_tag="VIQ99_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182827.1"
                     /translation="MLESRGEYCHEAYIPALALGLAIGVVAQTAADVAFVNEAS"
     gene            complement(834..1745)
                     /locus_tag="VIQ99_06495"
     CDS             complement(834..1745)
                     /locus_tag="VIQ99_06495"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9182828.1"
                     /translation="MRARRLWIGLSVALAASASAQSNDLEEQLRTTPITTQQLGENFH
                     VLFGVGGNILVSIGANGVLIVDDQFPQMVPKYKATIGSLGGGAVDFAINTHWHFDHAG
                     GNQVLGPDGTWLVAHESSRAMLGKDNVINIVTQTLDQPAYPELAQPVLTYDDTMRFHF
                     NGERIDLVHFGPAHTTGDTAVIFRGHKAVHMGDVYHSAAYPFIDADNGGSLNGIIDFC
                     TQVLEQIDDDYMIVPGHGPVTNATALAEYVAMLTTIRDRVNALIASGATLKQVVAAMP
                     TSDWDERRGDPASFLDRSYLSLTRERR"
     gene            complement(1789..2817)
                     /locus_tag="VIQ99_06500"
     CDS             complement(1789..2817)
                     /locus_tag="VIQ99_06500"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY9182829.1"
                     /translation="MIKAGIAGLGWWGKTLVEGVAGSKEIQFVAGSARNHTDDITTFA
                     KQNNFKLYKSYEDMLKHPGLDAVVLATPHSLHVPQTIAAAKAGKHVFCEKPFALHGAE
                     AREAVDAVEKSGVTLGLGYNRRWHPEMTKLRNMIDSGELGVILHVEATMTFPNALLLK
                     ADAWRASREETPCGGLTPMGVHAVDAMIDLCGPIDEVYCQSFRRAVTIDADDTTSILF
                     RMKEGMSGYLGTMTATGGGFDFVVYGSKGFVRFEGMTHVAGAPSEERRTRLFGTCTFK
                     PTQGPAKTWEAERLDLTKVTLESFARAAEGKEKFLIPVEEMVHGAAVTEAIIRSAETH
                     VPEKVRKA"
     gene            complement(2830..>3319)
                     /locus_tag="VIQ99_06505"
     CDS             complement(2830..>3319)
                     /locus_tag="VIQ99_06505"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEY9182830.1"
                     /translation="NIVPAGPAAAIEKLAPLNALMGRRTFPAGVKPEGAAAVKLANNM
                     LIGCAIEAMGEAFSLVRKYGVDPAAFYEVFTDGLFSAPAYKVYGNIIVKELYGQAGFT
                     TTLGLKDTGLMLAAGLAENVPLPSLNVYRDKLLTAMANGDANSDWAVIAKHQARDAGL
                     EK"
BASE COUNT          539 a         1104 c         1061 g          615 t
ORIGIN      
        1 tttcaaaccg cggcgcgacc tggctcgccc atttgagcac ggggacggtt ttccggtcgg
       61 aaaacccgag caggtcgacc tcgccttccg tcgcgacttt ggtttccccg cgctcgacga
      121 acgcggcttc gtcgcggatc gcgatgccga gactgccggc ggtctcgatc acgcgcgagt
      181 ggccggaaag cacgagcgga cgcgcgcgag caatctcgat cgatttggtc ggcgtcttgc
      241 tcgccgacga cagcagcgtg aagcgctcgt tgcgcccggc ctcgacgacg ggcttgtcgc
      301 gcacgagcgt catcgcacgg cccgcgcgca ggtgtgcgga aacctcgtag cgcagcgtga
      361 gcacgtagag tttttccgac gggcccgtca cgcgcacgca ggggcccaac accccgcgcg
      421 cactgacctt ctcgtcggtg tacatcggaa aactgatttg cagcggctcg ccttcgctgt
      481 acgcgttgaa cgcgaacacc gccgacacga ggtcgcgcac gatcgcgtgc tcctggtcgg
      541 gctgcatgac caggaagtcc aggtgattcg gaatcgtgct cgcggagacg acggtcatgg
      601 gatcactgcg cccggcgcat ctacgatgcc tcgttcacga acgcgacgtc ggcggccgtc
      661 tgcgcaacga caccgatcgc gagcccaagc gcaagcgctg gaatataggc ctcatggcaa
      721 tattctcctc tggattcgag catagccgtt cgcccgctcc tggtgccatc cgcccgcgcc
      781 gtatcgttag tgtgaagcgc gttcggcagg atctggactc gtgccgcctc tcgttagcgc
      841 cgctcgcgcg tgaggctcag ataggatcgg tccaggaagc tcgcgggatc gccccggcgc
      901 tcgtcccagt cggacgtcgg catcgcggcg acgacctgct tcaacgtcgc gccgctcgcg
      961 atcagagcgt tgacgcgatc gcgaatcgtc gtgagcatgg ccacgtactc cgccaacgcc
     1021 gtggcgttcg tcacgggacc gtgccccggc acgatcatgt aatcgtcgtc gatctgctcg
     1081 agcacttgcg tgcagaagtc gatgatgccg ttcaggctgc cgccgttgtc ggcgtcgatg
     1141 aacggatagg cggcgctgtg gtacacgtcg cccatgtgaa cggccttgtg tccgcggaag
     1201 atcacggccg tgtcaccggt cgtgtgcgcg ggaccgaagt gcacgagatc gatgcgctcg
     1261 ccgttgaaat ggaagcgcat cgtatcgtcg taggtcagca cgggttgcgc gagctcggga
     1321 taggccggct ggtcgagcgt ctgggtcacg atgttgatca cgttgtcctt gcccagcatc
     1381 gcacgcgagc tctcgtgcgc gacgagccac gtgccgtcgg gcccgagcac ctggttaccg
     1441 ccggcatgat cgaagtgcca gtgcgtgttg atcgcgaaat ccacggcgcc gccgcccaag
     1501 ctcccgatcg tagccttgta cttcggcacc atctgcggaa actggtcgtc gacgatcaag
     1561 acgccgttcg cgccgatcga caccagaatg ttgccgccga cgccgaacag cacgtgaaaa
     1621 ttctcgccga gctgctgggt cgtgatcggc gtcgtgcgca gctgttcctc caggtcgttg
     1681 gattgcgcag aagcagaagc cgcgagcgcg acgctcagac cgatccacaa acgacgcgcg
     1741 cgcatcgagc gctccttcga acggtgctag ccgaccggat gagttgtact acgccttgcg
     1801 gaccttctct gggacgtgcg tctcggcgga gcgaatgatc gcctccgtca ccgcggcgcc
     1861 gtgcaccatc tcctcgacgg ggatcaggaa cttctccttg ccctcggccg cgcgtgcgaa
     1921 ggactccagc gtgaccttcg tgagatcgag ccgctcggcc tcccacgtct tcgccggtcc
     1981 ttgcgttggc ttgaaggtgc acgtgccgaa caggcgcgtg cgccgctctt cggacggcgc
     2041 cccggcgaca tgtgtcatgc cttcgaagcg cacgaagcct ttcgagccat acaccacgaa
     2101 gtcgaagccg ccgccggtcg ccgtcatcgt gccgaggtag ccggacatgc cttccttcat
     2161 gcggaacagg atcgacgtcg tgtcgtcggc gtcgatcgtg acggcgcggc ggaagctctg
     2221 gcagtagacc tcgtcgatcg gaccacacag gtcgatcatc gcgtcgaccg cgtgcacgcc
     2281 catcggcgtc aagccgccgc acggcgtctc ctcgcggctc gcgcgccacg catcggcctt
     2341 gagcagcaac gcgttcggga acgtcatcgt ggcttcgacg tgcagaatga cgccgagctc
     2401 gccgctgtcg atcatgttgc gcagcttcgt catctcggga tgccagcggc ggttgtagcc
     2461 caaacccagc gtgacgccgg acttctcgac ggcgtcgacg gcttcgcgag cctccgcgcc
     2521 gtgcagagcg aacggcttct cgcagaacac gtgcttgccg gccttcgcgg ccgcgatcgt
     2581 ctgcggcacg tgcaacgagt gcggcgtcgc caggacgacg gcgtcgaggc ccgggtgttt
     2641 cagcatgtcc tcgtagctct tgtagagctt gaagttgttc tgcttcgcaa aggttgtgat
     2701 gtcgtcggtg tgattgcgcg cggagccggc aacgaactgg atttctttcg atccggcgac
     2761 gccttcgacg agcgtcttgc cccaccagcc gagtccggcg atacctgcct tgatcacgat
     2821 cgaatctcct tacttctcga gaccggcgtc gcgcgcctgg tgcttcgcga tcacggccca
     2881 atcgctgttc gcgtcgccgt tcgccatcgc ggtgagcagc ttgtcgcggt aaacgttcaa
     2941 gctcggcagc ggcacgttct cggccagacc cgcggcgagc atgaggcccg tgtccttgag
     3001 gccgagcgtc gtcgtgaacc ctgcctgccc gtacagctcc ttgacgatga tgttgccgta
     3061 gaccttgtac gcgggcgccg agaacaagcc gtccgtgaag acctcgtaga acgccgccgg
     3121 atcgacgccg tacttgcgca cgagcgagaa cgcctcgccc atcgcctcga tcgcgcaacc
     3181 gatcagcatg ttgttcgcga gcttgaccgc ggccgcgccc tcgggcttca cgcccgcggg
     3241 gaacgtgcgg cggcccatca atgcgttcaa cggcgcgagc ttctcgatcg ccgcagccgg
     3301 gccggccggc acgatgttg
//
LOCUS       DATCUD010000438         1551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_39784, whole genome shotgun sequence.
ACCESSION   DATCUD010000438 DATCUD010000000
VERSION     DATCUD010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39784"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VIQ99_06510"
     CDS             complement(<1..768)
                     /locus_tag="VIQ99_06510"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9182831.1"
                     /translation="MRIAIVGAGIAGNTVAYKLCAEHEITLFEAADYVGGHTHTVDVE
                     HGGARYAIDTGFIVCNDWTYPNFLALLAELGVATQPTSMSFSVSCERTGLEYNGTSLA
                     SLFADRRNLVRPRFYRLLADIVRFGRDARAYLATDNDTATLGDFLAAHRYGRELVDHY
                     VVPMTAAIWSAGPGSVFAMPARFLLRFLANHGMLSIDDRPQWRTVVGGSARYVDKMTL
                     RYRQRIRTSCPVISVARLPHGVAVRPRDGESEHFDAVF"
     gene            complement(765..>1551)
                     /locus_tag="VIQ99_06515"
     CDS             complement(765..>1551)
                     /locus_tag="VIQ99_06515"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006297094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016717 - oxidoreductase activity, acting
                     on paired donors, with oxidation of a pair of donors
                     resulting in the reduction of molecular oxygen to two
                     molecules of water [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA desaturase"
                     /protein_id="HEY9182832.1"
                     /translation="GVSVTAIVVAIGLYALRMFAVTGFYHRYFSHRAFKTSRAMQLLF
                     AVLGASAVQRGPLWWAGHHRHHHAHADRPTDAHSPRQRGFLWSHMGWFLARANFPTKL
                     ELVPDLARFRELMWLDRFDAAVPALLAVSLFAAGETLAALAPGLGTDGTQLLVWGFVV
                     STVAVWHATFAINSLAHVIGRRRFATRDDSRNHFGLALLTFGEGWHNNHHRYPGAARQ
                     GFRWWEIDVTYYALRALASLGLIWGLRPVPADIRAGVPREVAS"
BASE COUNT          294 a          507 c          528 g          222 t
ORIGIN      
        1 gaaaacggcg tcgaagtgtt cgctctcgcc atcgcgcggc cgcacggcaa cgccgtgcgg
       61 cagccgcgct accgaaatca ccgggcacga cgtgcggata cgctgccggt agcgcagcgt
      121 catcttgtcg acgtagcgcg ccgagccgcc gaccacggtg cgccactgcg gccggtcgtc
      181 gatcgacaac atgccgtggt tggccaaaaa cctgagcaag aaccgcgccg gcatcgcgaa
      241 cacgctgccc ggccccgcgg accaaatggc cgccgtcatc ggcactacgt agtggtcgac
      301 gagctcccgc ccgtagcgat gcgcggcgag gaaatcgccg agagtggccg tgtcattgtc
      361 cgtggcgaga tacgcccgtg cgtcgcggcc gaaacgaacg atgtcggcca gcaagcggta
      421 gaagcgcggg cgcaccaggt tgcgccgatc ggcgaacaaa gacgcaagcg acgtgccgtt
      481 gtactcgagc cctgtgcgct cgcagctcac gctgaagctc atcgacgtcg gttgagtcgc
      541 gacaccgagc tcggcgagca atgcgaggaa attgggatag gtccagtcgt tgcagacgat
      601 gaatccggta tcgatcgcgt agcgagcacc gccgtgctcg acgtccacgg tgtgggtatg
      661 cccgccgacg tagtcggcgg cctcgaacag cgtgatttcg tgctcggcgc acagcttgta
      721 ggctacggtg ttgccggcaa tgccggcgcc gacgatcgcg attctcacga cgctacctcc
      781 cgtggcacgc ccgcacgaat gtctgcgggc accggcctca agccccagat gagcccgagc
      841 gaggccaatg cacgcagcgc gtaataggtc acgtcgatct cccaccagcg gaacccttgg
      901 cgtgcggcac ccggataacg gtgatggttg ttgtgccacc cctcaccgaa cgtaagcagc
      961 gcgaggccga agtgattgcg gctgtcgtcg cgcgtcgcga accggcgccg gccgatcacg
     1021 tgcgcgagcg agttgatcgc gaacgtcgcg tgccagaccg ccaccgtgga tacgacgaat
     1081 ccccacacga gcagctgtgt tccatcggtg ccgagccccg gagccagcgc cgcgagggtc
     1141 tcgccggctg cgaacaagct gaccgcgagc aacgccggaa cggcggcatc gaagcggtcg
     1201 agccacatga gctcccggaa cctcgcgaga tctggcacga gctcgagctt ggtcgggaag
     1261 ttggcgcggg cgaggaacca gcccatgtgg ctccacagga agccccgttg tctcggcgag
     1321 tgggcatcgg taggccggtc ggcgtgcgca tgatggtggc ggtggtgacc ggcccaccag
     1381 agcggcccgc gctgcaccgc agacgcgccg agcaccgcga acaggagttg catcgcgcgc
     1441 gaggtcttga acgcgcggtg cgagaagtag cggtggtaga agccggtgac cgcaaacatt
     1501 cgcagcgcat acaggccgat cgcaacgacg atcgccgtga cgctgacgcc g
//
LOCUS       DATCUD010000439         3225 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_60795, whole genome shotgun sequence.
ACCESSION   DATCUD010000439 DATCUD010000000
VERSION     DATCUD010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60795"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..1725
                     /locus_tag="VIQ99_06520"
     CDS             43..1725
                     /locus_tag="VIQ99_06520"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182833.1"
                     /translation="MSTKSVAALVTALAAAVSASAFAQQPGTPPCPAVRDVLITNGEI
                     HTMNGANAIVDTVRIVGDRFAEVGTSQIPESRCTRTIDLGGRTAVPGLIDNHNHIVLL
                     GLRPGHDTRLEAAASIEDVLDTLRTKAASLPNGEWITSIGGIDVNQFVPPPGTPRFPT
                     LAELDSAAPNHPVYIQVSFAGPSVTNTLGKRFFEQAGIEVGADGAIAGGFQTPNPTTR
                     ALHELRQRQTLADQKRGTQDAMRYAASLGLTTHLDQGGFPATGTAADGAAHFDRYRAY
                     DALLELYAENALTQRIRLNFLHMETDVATPELAARLSNVFPDYGDDLLRIVGIGEFTA
                     GASPILGEATEVWRAGTRRVAEAGWRNENHSLTPADFKVIIDEWERLNASLPAPGIRD
                     QRWVVAHAPFITQEYAAKLKALGGGVSVLGGWRYISGTAQQNGPPFKLLLDSGLPVGM
                     SSDGMQISPMNPWIGLYYVVTGNNARGELINAGQTLDRTNALRLYTAANGWFLNEESM
                     LGTIEPGKYADLAVLSADYFDASAVPDDAIKSIRSVLTIVGGQIVHGDGDAL"
     gene            complement(1756..2274)
                     /locus_tag="VIQ99_06525"
     CDS             complement(1756..2274)
                     /locus_tag="VIQ99_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEY9182834.1"
                     /translation="MRFQTLAAVFLGTVPFAAGAEVKLATADALLIEHRFTIEVPAAR
                     AWEALVHPELYWPADHTWSGSRESLSIEANAGGCFCERWDGGSAEHGRVVMAIPGKAL
                     TLSAALGPFLDMAISGILAITLEESEGVTTAVVTYRVSGDPAHKLDALAPVVDQVLRL
                     QFGSFAAYALQR"
     gene            complement(2345..>3225)
                     /locus_tag="VIQ99_06530"
     CDS             complement(2345..>3225)
                     /locus_tag="VIQ99_06530"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9182835.1"
                     /translation="GLLDVLPHPNFAQNGLIYLSYTKGGEGNLATTAFMRARLDGKAL
                     KDAKEIFVAENWSTSPTNFGGRMVFGRDGKLYTAIGERQEPERAQNTMLHGGKVLRLN
                     EDGTVPSDNPFVGKPGYLPEIYSLGHRSPQGLAVHPVTGELWENEHGPLGGDEINIVR
                     AGKNYGWPLVTYGKNYDGTAVSEFSSRDGFEPPFMFWVPSIAISGLSFYTGDRYGPTW
                     KGNAFVGSMMEGRTRATGHVQRITFAENGQPIQREPILAQLRQRIRDVRPGPDGLLYV
                     LTDQNPGVLLRIEPAD"
BASE COUNT          552 a         1119 c         1041 g          513 t
ORIGIN      
        1 cgcacgatcc gagaaaagac gaacgttagg gggattacca tcgtgtcgac caaatcagtc
       61 gcggcactcg tgaccgcact cgcagccgcc gtttcggcat cggcattcgc gcagcagccg
      121 ggaacgccgc cctgccccgc cgtacgcgac gtgctgatca cgaacggcga gatccacacg
      181 atgaacggcg ccaacgcgat cgtcgacacc gtgcgcatcg tcggcgaccg attcgcggaa
      241 gtcggcacga gtcagattcc ggagagccgc tgcacacgca cgatcgacct cggaggtcgc
      301 accgcggtgc cgggcttgat cgacaatcac aaccacatcg tgctgctcgg gctccggccc
      361 gggcacgaca cgcggctcga ggccgccgcg tcgatagagg acgtgctcga caccttgcgc
      421 acaaaggctg cgtcgctgcc gaacggcgag tggatcacgt cgatcggcgg aatcgacgtc
      481 aatcagttcg tgccgccgcc cggaacgccg cgcttcccga cgttggccga gctcgactcc
      541 gcggcgccga atcacccggt gtacatccag gtgtcgttcg cggggccctc cgtcacgaac
      601 acgctcggta agcgcttttt cgagcaggcg ggcatcgaag tcggcgccga cggcgcgatc
      661 gcgggcggtt tccagacgcc gaatccgacg acgcgcgcgc tgcacgagct gcgtcaacgg
      721 caaacgctcg cggatcagaa gcgcggcacg caggacgcga tgcgttatgc ggcgagcttg
      781 gggctcacga cacacctcga ccaaggcggc tttccagcca ccggcacggc ggccgacggc
      841 gccgcgcact tcgatcgcta tcgtgcgtac gatgcgctgc tcgagctcta cgccgagaac
      901 gcattgacgc agcggatccg cctgaacttc ctgcacatgg agaccgacgt cgcgacgccc
      961 gagctcgcgg cgcgtctcag taacgtgttc ccggactacg gcgacgacct gctcaggatc
     1021 gtcggcatcg gcgaattcac ggctggcgcc tcgccgatcc tcggcgaggc caccgaggtc
     1081 tggcgcgccg gcacgcgccg cgtcgccgaa gcgggctggc gcaacgagaa ccactcgctg
     1141 acgccggccg acttcaaagt catcatcgac gaatgggaac ggctgaacgc gtcgctgcct
     1201 gcgcccggga tccgcgacca gcgctgggtc gtcgcgcacg cgccgttcat cacgcaagag
     1261 tatgccgcca agttgaaggc gctcggcggc ggcgtcagcg tgctcggcgg ctggcgctac
     1321 atcagcggca cggcacagca gaacggaccg ccgttcaagc tgctgttgga cagcggctta
     1381 cccgtgggca tgagctccga cggcatgcag atctcgccga tgaatccgtg gatcggcttg
     1441 tactacgtcg tcacgggcaa caacgcgcgc ggcgagctga tcaacgccgg ccaaacgctc
     1501 gaccggacca acgcactgcg gctctacacg gccgcgaacg gttggttcct gaacgaggaa
     1561 agcatgctcg gcacgatcga gcccggcaag tacgcggatc tcgccgtgct ctcggccgat
     1621 tacttcgacg cgagcgccgt gccggacgac gcgatcaaga gcatacgctc ggtgctgacg
     1681 atcgtcggtg gccagatcgt gcacggcgac ggggacgcgc tgtagcgcgc agcgcttgga
     1741 ccggcaacgg ctcggctatc gctggagcgc gtacgcggcg aagctgccga actgcagtcg
     1801 cagcacctgg tccacgaccg gcgcgagcgc gtcgagcttg tgcgccggat cgccgctgac
     1861 acgataggtc accacggcgg tggtcacgcc ttcgctttct tcgagtgtga tcgccagaat
     1921 cccgctgatc gccatgtcga ggaatggccc gagcgccgcg ctgagcgtga gcgccttgcc
     1981 cggaatcgcc atgacgacgc ggccgtgctc tgcgctgccg ccgtcccatc gttcgcaaaa
     2041 gcaaccaccc gcattcgctt cgatcgaaag cgattcgcga ctgccggacc acgtatggtc
     2101 cgccggccag tagagctccg gatgcacgag cgcttcccac gcccgcgcag cgggcacttc
     2161 gatcgtgaac ctgtgctcga tcagcagcgc atcggcggtt gccaacttca cttccgcgcc
     2221 ggccgcgaac gggacggtgc cgagaaagac ggctgccagg gtctggaatc tcatcgcgat
     2281 cgtttccttc gtccactcgc cgggggcagg cgcgcgatcg cgcccccgct cggggcatcg
     2341 ttcgtcaatc cgcgggctcg atgcgcaaca gcacgcccgg gttctgatcg gtcagcacgt
     2401 acagcagccc atcggggccc ggccgcacgt cccgaatccg ttggcgcagc tgcgccagga
     2461 tcggctcgcg ctggatcggc tggccgttct cggcgaacgt gatccgctgc acgtggcccg
     2521 tcgcgcgcgt gcggccttcc atcatcgagc cgacgaacgc gttgcccttc cacgtcggac
     2581 cgtaccggtc gccggtgtag aagctcaagc ccgagatcgc gatcgacggc acccagaaca
     2641 tgaacggcgg ctcgaatccg tcgcgcgacg agaattcgct gaccgcagtg ccgtcgtagt
     2701 tcttgccgta cgtgacgagc ggccagccgt agttctttcc ggcgcgcacg atgttgatct
     2761 cgtcgccgcc gagcgggccg tgctcgttct cccacagctc gccggtcacg ggatgcacgg
     2821 ccagcccttg cgggctgcga tggccgagcg agtaaatctc cggcagatag cccggcttgc
     2881 cgacgaacgg attgtcggac ggcaccgtgc cgtcctcgtt caaacgcagc accttgccgc
     2941 cgtgcagcat cgtgttctgc gcgcgctcgg gctcctggcg ctcgccgatc gccgtgtaca
     3001 gcttgccgtc gcggccgaag accatgcggc cgccgaagtt cgtcggcgag gtgctccagt
     3061 tctccgcgac gaagatctcc ttcgcgtcct tcagcgcctt gccgtcgaga cgcgcacgca
     3121 tgaacgccgt cgtcgcgaga ttgccttcgc cgcccttcgt gtagctcaaa tagatcaacc
     3181 cgttctgcgc gaaattcggg tgcggcagca cgtcgagcaa gccgc
//
LOCUS       DATCUD010000440         1760 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75408, whole genome shotgun sequence.
ACCESSION   DATCUD010000440 DATCUD010000000
VERSION     DATCUD010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75408"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIQ99_06535"
     CDS             complement(<1..212)
                     /locus_tag="VIQ99_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008264799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182836.1"
                     /translation="MKFRGQAALITGASSGIGAALARELAREGAGLVLMARRRERLET
                     LRAELAAAGAHVAVHVGDVTRRADLDA"
     gene            complement(246..>1760)
                     /locus_tag="VIQ99_06540"
     CDS             complement(246..>1760)
                     /locus_tag="VIQ99_06540"
                     /EC_number="1.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009553514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEY9182837.1"
                     /translation="NVADLKPVWTMSTGTTEGHQSPPIVNDGVMFVTTPFNQVIAIDA
                     KTGDLLWRYRHQMPPDIRMGHPTNRGVALYGDKVYTATSDARVVALDAKTGAVVWNKA
                     VENYNTGYYMTIAPLAARGKIMVGVSGGERGIRGFVVALDANTGEQVWKSYTVPAPGE
                     PGNDTWPGESWRTGGAPVWVTGSFDPKLGLTYWGTGNPGPWTGDTRPGDNLYTNSVVA
                     FDVETGALRGYHQYHWNDSWDWDEVAAPLLIDLPRGNRTVPGLVHAGRNGYLWLLERN
                     ASEISFLKAWPYVKQNVFTRIDPTTGRPEYDMDRKPAVGKPAIYCPSLWGGKDWPPAA
                     YNPGTGYLYIPANENLCQHMVGEEVEYRPGQQFTGAQTLDFIVAEGATHIGELQAWNL
                     KTGERAWTQEFQSPNWGPVMTTAGGLVFSGGTTDRYFRAFDAATGRLLWQYRTNSGIT
                     GVPTSFEIDGVQYIAVQSGWGVDAQGMTGRIDRARGTETIVPQGGVVWVFALKR"
BASE COUNT          250 a          604 c          604 g          302 t
ORIGIN      
        1 gcgtcgagat cggcgcgccg cgtcacgtcg ccgacgtgca cggcgacgtg cgcgcccgcg
       61 gccgcgagct ccgcgcgcag cgtctcgagc cgctcgcgcc ggcgcgccat cagcacgagt
      121 cccgcgccct cgcgcgcgag ctcacgggcc aacgcggcgc cgatgccgga cgatgcgccc
      181 gtgatcagag cggcctggcc gcggaacttc atgcgcgcag cgtcacgcgg gcactctgcg
      241 cgttgtcagc gcttcagcgc gaacacccag acgacaccgc cctgcggcac gatcgtctcc
      301 gtgccgcgtg cgcggtcgat gcggccggtc atgccctggg cgtcgacgcc ccagcccgat
      361 tgcacggcga tgtactgcac gccgtcgatc tcgaacgacg tcggcacgcc cgtgatgccc
      421 gagttcgtgc ggtattgcca cagcagccgg ccggtcgcgg cgtcgaacgc gcggaagtag
      481 cggtcggtcg tgccgccgct gaacacgagg ccgcccgccg tagtcatgac cgggccccag
      541 ttcggcgatt gaaattcctg cgtccaggcg cgctcgccgg tcttgagatt ccatgcttgc
      601 agctcgccga tgtgcgtggc gccttctgcc acgatgaagt cgagcgtctg cgcgcccgtg
      661 aactgctggc cgggccgata ctcgacttcc tcgccgacca tgtgctgaca gaggttttcg
      721 ttggccggga tgtaaagata acccgtgccg gggttgtagg ccgcgggcgg ccagtccttg
      781 ccgccccaca gcgacgggca gtagatcgcg ggtttgccca cggcgggctt ccggtccatg
      841 tcgtactcgg ggcggcccgt cgtgggatcg atgcgcgtga acacgttctg cttcacgtac
      901 ggccacgcct tgaggaacga gatctcggag gcattgcgct ccagcagcca caagtagccg
      961 ttgcggcccg cgtgcacgag cccgggcact gtgcggttgc cgcgtggcag gtcgatcagc
     1021 agcggcgccg cgacctcgtc ccaatcccac gagtcgttcc agtgatactg gtgatagccg
     1081 cgtaatgcgc cggtctcgac gtcgaacgcg acgaccgaat tcgtgtacag gttgtcgccg
     1141 ggtcgagtgt cgccggtcca tgggcccggg ttgccggtgc cccaataggt gagcccaagc
     1201 ttgggatcga agctgcccgt gacccagacg ggcgcgccgc cggtgcgcca ggactcgccg
     1261 ggccacgtgt cgttgccggg ctcgccgggc gcgggcacgg tgtaactctt ccagacttgc
     1321 tcgccggtgt tagcatccag cgcgacgacg aagccgcgga tgccgcgctc gccgcccgag
     1381 acgccgacca tgatcttgcc gcgtgccgcg agcggcgcga tcgtcatgta gtagccggtg
     1441 ttgtagttct cgacggcctt gttccacacg acggcgccgg ttttcgcgtc gagcgcgacg
     1501 acgcgcgcgt ccgacgtcgc cgtgtagacc ttgtcgccgt acagcgcgac accgcgattc
     1561 gtggggtgtc ccatgcggat gtcgggcggc atctggtgcc ggtaccgcca cagcagatcg
     1621 ccggtcttcg cgtcgatcgc gatgacctgg ttgaacggcg tcgtgacgaa catcacgccg
     1681 tcgttgacga tcggcggcga ctgatggccc tctgtggttc cggtcgacat cgtccacacg
     1741 ggcttgagat ccgcgacgtt
//
LOCUS       DATCUD010000441         2294 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_96788, whole genome shotgun sequence.
ACCESSION   DATCUD010000441 DATCUD010000000
VERSION     DATCUD010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2294
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96788"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            286..495
                     /locus_tag="VIQ99_06545"
     CDS             286..495
                     /locus_tag="VIQ99_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007446969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182838.1"
                     /translation="MAEAAAASAERHGLSLSAWLNRAAEKALAIEDGLAAVAEWEAEH
                     GAFTAEEIAAADAVLDAARKTAPTR"
     gene            495..878
                     /locus_tag="VIQ99_06550"
     CDS             495..878
                     /locus_tag="VIQ99_06550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013875192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twitching motility protein PilT"
                     /protein_id="HEY9182839.1"
                     /translation="MTMGTTYDTGALLAAEAHRRELWVLHARSLLRGERPIVPAAVLA
                     QAWRGGPQAALSRLLRGCVVEDLDEPRARAAGVVCARSGTRDIVDAIVVAGALARADL
                     VVTSDADDLERISGALGSSIPIHRI"
     gene            complement(919..>2294)
                     /locus_tag="VIQ99_06555"
     CDS             complement(919..>2294)
                     /locus_tag="VIQ99_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182840.1"
                     /translation="EYKDFDRFSYSHEIRTQYGTCCGTPWDGTFYLTQDGTAERPIAI
                     KAAGDGEVIFDGDGNNVLFNVMGADYTYFEGITFRNTNLAIEAGQKSIAGTVGLTVKH
                     SRFDQVGVVIHSDWSGSKNFYIADNIMNGRNDPTYLIGWFNIWPWNTVEGQQEKQRMK
                     SYYAVSIYGSGHVVAYNSVTNFHDGIDHATYGMPDDYPNTPRDRMPVSNDFYGNDVSN
                     MHDNCFETDGGMHNQRVFRNRCFNAGVGAMSPQPIFGGPVYFIRNVVYNSVYGPLKIQ
                     ADPSGILVYQNTYIGEIQQITPASNMHFRNNLIMGTKARPALFAIDTHTPWSSSDYNG
                     FHVNAGAEYSFQWNSPPAAGPVDYASPREVRRFKTLAEYQRATGQDRHSRELDYSVFV
                     NAAPPDFSDPTKLASPSDVDLRLRPRSRAVDAGTVLPGLTDGFTGRAPDLGAYEQGIE
                     PLHYGPR"
BASE COUNT          369 a          700 c          772 g          453 t
ORIGIN      
        1 gcggcgcgtg cgaaacccgt tgcggcgctg cggtatgaat gacagcgcag tggtcttgct
       61 cgtgggcgcc cctcctgcga gggatttgtt gaatgcgagg cattcgcatc aagtgatcct
      121 ccagaatctg aaccctcttc ccggattcgt ctgtcgcatg cagcgtcggt tgacacgtag
      181 cctgccgcgc agtcggcagg atcgcccggt tggttgcggt aggaacgcgg tgctaccatg
      241 ccatcgatgg gagtaaagaa gctcagcatt gcgctggacg agcgcgtggc cgaggctgcg
      301 gctgccagtg ccgaacgcca tggtttgagc ctttcggcat ggctgaatcg tgccgccgag
      361 aaggcgttgg cgatcgaaga cgggttagcg gccgtcgccg aatgggaggc cgagcacggc
      421 gcattcaccg ccgaggagat cgcggcggcg gacgccgtcc tcgatgccgc tcgcaagacc
      481 gcgcccacgc gctgatgacg atggggacga cctacgatac cggtgctttg ctcgcggccg
      541 aagcccatcg acgcgagttg tgggttctgc acgcgcgctc gctgctgcgc ggcgaacggc
      601 ccatcgtacc cgcggcagtg ctcgcccaag cctggcgcgg cggaccgcag gccgcgttat
      661 ctcgtctgct gcgcggctgt gtagtcgagg accttgatga gccgcgcgcg cgtgcggccg
      721 gcgtcgtgtg cgcgcgttcc ggtactcgcg acatcgtcga tgcaatcgtc gtcgccggcg
      781 cactcgctcg cgcggatctc gtcgtgacga gcgatgccga cgatctcgag cggatctcgg
      841 gcgcgctcgg ctcgtcgatc cccatccata gaatctagcc gcgagtgctc aggcgccgcg
      901 gatcctctcg cgagtcgcct agcgaggccc gtagtgtagc ggctcgatgc cttgctcgta
      961 ggcaccgaga tccggcgccc tgcccgtgaa accgtcggtg aggccgggta gcaccgtgcc
     1021 ggcgtcgacg gcgcgcgagc gcgggcgcaa cctcaggtcg acatcgctgg gcgatgcgag
     1081 cttagtcgga tcagaaaagt ccggaggcgc tgcgttcacg aacaccgagt agtcgagctc
     1141 gcggctgtgg cgatcctgcc ccgtcgcgcg ctgatattcg gccagcgtct tgaagcgccg
     1201 cacctcgcgc ggcgaagcgt agtcgaccgg ccctgccgca ggcggcgaat tccactggaa
     1261 cgagtactcg gcgcccgcgt tcacgtggaa gccgttgtag tcggacgagc tccacggcgt
     1321 gtgcgtgtcg attgcgaaca aggcgggccg cgccttcgtg cccatgatca agttgttgcg
     1381 gaagtgcatg ttcgacgccg gcgtgatctg ctgaatctcg cctatgtaag tgttctgata
     1441 gacgaggatg cccgacgggt cggcctgaat cttgagcggc ccgtacacgc tgttgtagac
     1501 gacgttgcga atgaaataga cgggcccgcc gaagatcggc tgcgggctca tcgccccgac
     1561 tcccgcattg aagcagcgat tccggaacac gcgctggttg tgcatgccgc cgtcggtctc
     1621 gaagcagttg tcgtgcatgt tcgagacgtc gttgccgtag aaatcgttcg acaccggcat
     1681 gcggtcgcgc ggcgtgttcg gataatcgtc gggcatgccg tacgtcgcgt ggtcgatgcc
     1741 gtcgtggaag ttcgtgacgc tgttgtaggc gacgacgtgg ccggagccgt agatcgacac
     1801 tgcgtagtac gacttcatgc gctgcttttc ttgctggccc tcgaccgtgt tccacggcca
     1861 gatgttgaac cagccgatga gataggtcgg gtcgttgcgg ccgttcatga tgttgtcggc
     1921 gatatagaaa ttcttcgagc ccgaccagtc gctgtggatg accacaccga cttgatcgaa
     1981 cctcgagtgc ttgaccgtca agccgacggt gcccgcgatg ctcttttgcc cggcttcgat
     2041 cgccagattc gtattgcgga acgtgatgcc ttcgaagtac gtgtagtcgg cgcccatgac
     2101 gttgaacagc acgttgttgc cgtcgccgtc gaagatgact tcaccgtcgc cggccgcctt
     2161 gatcgcgatc ggccgctcgg ccgtgccgtc ctgcgtgaga tagaacgtgc cgtcccacgg
     2221 cgtgccgcaa caggtgccat attgcgtgcg gatctcgtgg ctgtagctga agcggtcgaa
     2281 gtccttgtac tcgc
//
LOCUS       DATCUD010000442         1935 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18665, whole genome shotgun sequence.
ACCESSION   DATCUD010000442 DATCUD010000000
VERSION     DATCUD010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18665"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(128..1195)
                     /locus_tag="VIQ99_06560"
     CDS             complement(128..1195)
                     /locus_tag="VIQ99_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020710475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182841.1"
                     /translation="MAAGVALSVDAQPAYEVHDSHFHLTNYVQEGIEIREFLGLMGDT
                     VGRVALFGIPLQQTWSYENSGEFAPTYYLQTDAPLYYYSFTDAYIASVYNALTPAEQA
                     RFEPMITGFNPADMYAADHIRRVLRTFPGVFTGIGEFTIHKEFVSSKIAGDTASLTDP
                     ALDRIFDFCAETGLLILIHNDIDMPFAREGTEPVYLAQMKGLLRRHPNTTVIWAHVGL
                     GRVVRPVQPPASAGAAERPANHVEIVREMLEDPTLSHLRFDISWDEVAKYVVATPESL
                     RRTAELLNQFPDRFLFGSDEVAPRDRDQYLRVYRQYEPLWNLLTPEARDSIKRGNFER
                     LFGAARAKVRAWEAANVLRAP"
     gene            complement(1296..>1935)
                     /locus_tag="VIQ99_06565"
     CDS             complement(1296..>1935)
                     /locus_tag="VIQ99_06565"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018344989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaminase"
                     /protein_id="HEY9182842.1"
                     /translation="VAVEQYRGSEMNAMVNPGAITATSMVTGATRDEVWNKILGFHSD
                     FAGRPLKVNQEVYASEAATNQRNQAIGRLMFAYGHIKANPDQATDIYTEQCSISVNAK
                     DLATMAATLANGGKNPVTGKQVMSADNVPEVLAVMATAGLYDDSGKWLYRTGLPAKSG
                     VGGGIIAVSPGKFGIAVISPPLDAAGNSVRAQRAIADISNALGGNPYAARPR"
BASE COUNT          326 a          634 c          635 g          340 t
ORIGIN      
        1 cgagaaccca gcgatcgagc ttcatacgca ccccctaccg cccgcgaaac gtacgctcga
       61 tgatcagtat tgcggctaat gcgcgcccgc ggcaatgcgt cgccgcggca tggatcgaac
      121 ccacatttca gggggctcgc agcacgttgg cggcttccca agcccggacc ttcgcgcgcg
      181 cggcgccgaa caggcgctcg aagttgcctc ttttaatcga atcgcgcgcc tcgggggtca
      241 gcagattcca cagcggttcg tattgccggt acacgcgcag atattggtcg cggtcgcgcg
      301 gcgcgacctc gtcactgccg aacaagaacc ggtcggggaa ctgattcagc agctcggctg
      361 tgcggcgcaa agactccggc gtcgcgacta cgtatttcgc gacctcgtcc caggaaatgt
      421 cgaagcggag gtggctcagc gtgggatcct cgagcatctc cctgacgatc tcgacgtgat
      481 tcgccggccg ctcggcggca ccggccgaag ccggcggctg cacgggacgc acgacgcggc
      541 cgagcccgac gtgagcccaa atgaccgtcg tgttcggatg ccggcgtagc aggcccttca
      601 tctgtgcgag gtagacgggc tcggtgccct cgcgcgcgaa tggcatgtcg atgtcgttgt
      661 gaatcaagat cagcaatccg gtctcggcgc agaaatcgaa gatccggtcc aatgcgggat
      721 cggtgaggct cgcggtatcg ccggcgatct tcgaggacac gaactccttg tggatcgtga
      781 actcgccgat acccgtgaac acaccgggaa acgtccgcag cactcgccgg atgtgatcgg
      841 cggcatacat gtcggccggg ttgaagcccg tgatcatggg ctcgaagcgc gcctgttcgg
      901 ccggcgtcag cgcgttgtag accgacgcga tgtacgcatc cgtgaacgag tagtagtaga
      961 gcggcgcatc ggtctgcaag tagtaagtcg gcgcgaactc gcccgagttc tcgtaggacc
     1021 acgtttgctg gagcggaatc ccgaacaggg cgacgcgccc gacggtatcg cccatgagac
     1081 ccaggaactc gcggatctcg atgccttcct gaacgtagtt cgtcaggtgg aagtgcgagt
     1141 catgcacctc gtacgccggc tgggcatcga ccgacagggc gacgccggcg gccacggcgc
     1201 cgagcagtga cgccagccgc gacgcccggc gcccccggcg agcctgggtt cgtatgcgcc
     1261 agcgcgccac gtgcgccctc ggccggcccg gcacttcagc gcggccgggc ggcgtacggg
     1321 ttgccgccga gcgcgttcga gatatccgcg atcgcgcgct gcgcgcgaac gctgttgccc
     1381 gccgcatcga gcggcggaga gatcaccgca atcccgaact tgcctggcga gacggcgatg
     1441 atgcccccgc cgacgccgct cttcgcaggc aacccggtgc gatagagcca cttgcccgag
     1501 tcgtcgtaca ggccggccgt cgccatcacg gcgaggacct cggggacgtt gtccgcgctc
     1561 atgacttgct tgccggtgac ggggttcttg ccgccgttcg cgagcgtggc cgccatcgtc
     1621 gccagatcct tggcgttcac gctgatcgag cactgctcgg tgtagatatc ggtcgcctgg
     1681 tccgggttcg ccttgatgtg gccgtatgcg aacataagcc tgccgatcgc ctggttgcgc
     1741 tggttcgtgg cggcttccga ggcatagacc tcttggttga ccttgagcgg ccggccggca
     1801 aagtcgctgt ggaagcccag aatcttgttc cagacctcgt cacgcgtcgc gcccgtgacc
     1861 atgctcgtgg ccgtgatcgc accagggttc accatcgcgt tcatttccga gccgcgatac
     1921 tgctcgaccg ccacg
//
LOCUS       DATCUD010000443         2411 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_25746, whole genome shotgun sequence.
ACCESSION   DATCUD010000443 DATCUD010000000
VERSION     DATCUD010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25746"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VIQ99_06570"
     CDS             <1..429
                     /locus_tag="VIQ99_06570"
                     /inference="COORDINATES: protein motif:HMM:NF044751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182843.1"
                     /translation="FLEAVVGRCSGISYTYRDVNQQHGQPLQGGGLAIGDRAPDVDLP
                     GGHTLFELTRHARCTLLALPVTEAHRKTLEASLKGLAHRFAQVVELRTVAPSPQLEQR
                     YGVSHEDRLLLLRPDGYIGFFGRASDLPALEMRLTEWFKL"
     gene            524..1378
                     /locus_tag="VIQ99_06575"
     CDS             524..1378
                     /locus_tag="VIQ99_06575"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome domain-containing protein"
                     /protein_id="HEY9182844.1"
                     /translation="MDFVYFLGRFHVLVLHLPIGIIIALCVLEWLSRKEKYRYLEAAS
                     PFLWGATAISAVVTVVLGFMHFAEGAFTGPSAEQHRFFGTVVAAVAAVVALLRVSRFA
                     SSYKPLFLPASAVLLVLVAVTGHYGGNLTHGSTYLVEYAPQFLRSLAGLEPRRTITSV
                     STADPFADVVGPMLVERCASCHNEDKQESSLVLTTFAGVMRGGESGRVVVAGNTDLSE
                     LLRRISLPEDDDEFMPAEGKTPLTAAQVEIIRWWISVGAPNGGTVGEHEVPAEMRATL
                     SQELGVSF"
     gene            complement(1387..>2411)
                     /locus_tag="VIQ99_06580"
     CDS             complement(1387..>2411)
                     /locus_tag="VIQ99_06580"
                     /inference="COORDINATES: protein motif:HMM:NF023165.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HEY9182845.1"
                     /translation="SVTEEGDTIVIKPADPKVIYVPYYDPSYVVVRHAAPAYYYYPWA
                     YPAYYYPYPVGYHFGVGFFWGVSSWFSIGWHSHHVHVYDYHYHGHPYYGFTYYQPYYY
                     GHSYTHVNVHNNYVWEPYHRYGGRPVVRGYEGRAYTANTPPRSSYDTATGSAYRGSAG
                     RANPTASRTSPSAEATGATRSSAGRANPAASRTVPSDSSRGTPTSAYRNRSAQTNARA
                     TPNADTARSVPNTASTRTTPSTSIARAGRATGGNATAAPNATPRSTTVYRQQSRGVGA
                     DTAGAPRASTGMPRESSRGAEMRSAPSAPRSEGAGRANGGGGGSYRSGDGGGARGGSA
                     GGGRYR"
BASE COUNT          346 a          790 c          818 g          457 t
ORIGIN      
        1 ttcctcgagg ccgtcgtcgg ccgctgctcc ggtatctcct atacctatcg agacgtgaat
       61 caacagcacg gccagccgct acagggcggc ggtctcgcga tcggcgaccg ggcgcccgac
      121 gtcgatctgc ccggcggcca cacgttgttc gagctcacgc gccacgcgcg ctgtacgctg
      181 ctcgcgctgc ctgtgaccga ggcccaccgg aaaaccctcg aggcgagtct gaaagggctg
      241 gcgcatcggt tcgcgcaggt cgtcgagctc cgtacggtcg cgccgtcgcc gcagctcgag
      301 cagcgttacg gtgtgagtca cgaggatcgg ttgttgctgc tgcggcccga cgggtacatc
      361 gggttcttcg gccgcgccag cgatctgccg gcgctcgaga tgcgtctcac ggagtggttc
      421 aagctctgaa cttttcttgt ccgctcattc cgcggctgga agttgctgct cgagctgttt
      481 atcgtagcag ccgcgttcaa ttggccagca gaaggtgcaa ggcatggatt tcgtctattt
      541 cctgggccgc ttccacgttc tcgtcttgca tctgcccatc ggcatcatca tcgcgttgtg
      601 cgtgctcgag tggctgagtc gcaaagagaa gtaccgctat ctcgaggccg cctcaccgtt
      661 cctgtgggga gcgaccgcga tctctgctgt cgtgaccgtc gtgctcggct tcatgcattt
      721 cgcggaaggc gcgttcacgg gcccgtcggc cgagcaacac cgcttcttcg gcactgtggt
      781 cgccgcggtg gcagccgtcg tcgctctgct gcgagtcagc cgttttgcgt cgagctacaa
      841 gccgttgttc ttgcccgcgt ccgcggtgct gctggttctc gttgcggtga cgggacacta
      901 cggcggtaat ctcacgcacg gctcgacata tctcgtcgag tacgcgccgc aattccttcg
      961 ttcgctcgca ggtctcgagc cgcggcgtac gatcacgagc gtatcgactg ccgatccgtt
     1021 cgcggacgtc gtcgggccga tgctcgtcga gcgctgcgcg agctgccaca acgaggacaa
     1081 acaggagtcg agcctggtgc tgaccacgtt cgccggggtc atgcgcggcg gcgagagcgg
     1141 ccgcgtcgtc gttgccggca acacggacct gagcgagctg ttgcggcgga tctcgctgcc
     1201 cgaggacgac gacgagttca tgccggccga gggcaagacg cccctgacgg ccgcgcaggt
     1261 cgagatcatc cgctggtgga tctcggtcgg cgcgccgaac ggcgggaccg ttggcgagca
     1321 cgaagtgccg gccgagatgc gcgcgacctt atcgcaggag ctcggcgtca gcttctgacg
     1381 ctgcgcctag cgatagcgtc cgccgcccgc ggacccgcca cgcgcgccac cgccgtcgcc
     1441 ggaccgatag cttccgccgc caccaccatt ggcccggccc gcgccctccg agcgcggagc
     1501 cgacggtgcg ctgcgcatct ccgctccgcg cgacgattcg cgcggcatac ctgtcgatgc
     1561 acgcggtgcg ccggccgtat cggcgccgac gccgcggctc tgttgccggt aaacggtcgt
     1621 cgatcgcggt gtcgcgttcg gcgctgcggt cgcgttgccg cccgtcgcgc ggcccgcgcg
     1681 tgcgatgctc gtgctcggcg tcgtgcgcgt gctagccgtg tttggcactg agcgcgcggt
     1741 gtcggcgttc ggtgtcgcgc gcgcgttcgt ctgcgcgctg cggttgcgat acgccgaagt
     1801 cggcgtgccg cggctcgagt cgctcggaac cgtgcgcgac gcggccggat tcgcgcggcc
     1861 cgcgctgcta cgagtcgccc cggttgcctc ggcgctcggg gacgtgcgcg acgccgtcgg
     1921 atttgcgcgg cccgcgctgc cacggtacgc ggatcccgtc gcggtgtcgt agctcgagcg
     1981 cggcggtgta ttcgccgtgt acgcgcggcc ctcgtacccg cgcacgaccg gacgcccacc
     2041 gtaacggtga tacggctccc agacgtaatt gttgtgcacg ttcacgtgcg tgtacgagtg
     2101 accgtagtag tacggctggt agtacgtgaa accgtagtac ggatgtccgt gatagtggta
     2161 gtcgtacacg tgaacgtggt gcgagtgcca accgatcgag aaccagctgc tgacgcccca
     2221 gaagaaaccg acgccgaagt gatagccgac cgggtagggg tagtagtaag ccggatacgc
     2281 ccacggatag tagtagtagg ccggtgccgc atggcgaacg accacatacg acgggtcgta
     2341 ataaggcacg tagatgacct tcggatcggc gggcttgatg acgatcgtgt cgccttcttc
     2401 ggtcacgctc t
//
LOCUS       DATCUD010000444         3233 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11379, whole genome shotgun sequence.
ACCESSION   DATCUD010000444 DATCUD010000000
VERSION     DATCUD010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3233
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11379"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VIQ99_06585"
     CDS             <1..381
                     /locus_tag="VIQ99_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017505023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182846.1"
                     /translation="VLGAFLCPVSNLGLAAMSLVGPDLRVFGTALFLENFSEGFAGTA
                     LIAWMSSLTTFGYAATQYALLSSFYAILGKVLKGLSGVAVETLDRSFDLLIAYGLFFA
                     ITASIAVPSVLVALWAARLHRRAR"
     gene            complement(363..1064)
                     /gene="trmB"
                     /locus_tag="VIQ99_06590"
     CDS             complement(363..1064)
                     /gene="trmB"
                     /locus_tag="VIQ99_06590"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018871544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEY9182847.1"
                     /translation="MDTPDAAERRLRKVRSFVRRPGRATAAQRRALAELLPLVNADRP
                     PGPIDLRDLFGRDARRVLDIGFGDGEALVTNALNHPGVDYLGIEVHEPGIGHLLLLLE
                     RSGAKNVRVIARDATEVVPELLPDSSFDAVDLFFPDPWPKKRHHKRRIVQPPFVTEIA
                     RVLKRGGLLHVATDWADYARHTREVLERDTRFAAMTREDLSGEPLAVRPPTKFERRGV
                     RLGHEVVDLYYRARL"
     gene            1183..2970
                     /locus_tag="VIQ99_06595"
     CDS             1183..2970
                     /locus_tag="VIQ99_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY9182848.1"
                     /translation="MSDESSGGAASRRDFLVAAGLGAVAIGAGLGSQAQAQPGGAGAV
                     PAGAPSGYNILFILVDQERHFRRGELPSGFRLAAHERLKRQGTTFVNHRINSCVCTPS
                     RSVIYTGRHIQQTGMFDNTNFPWIQSMSTELPTLGDMLREAGYYTAYKGKWHLTKEFE
                     TVNTLGTPTKIFTEEMEAYGFSDYFGIGDIIAHTRGGYLHDGVISSMAVSWLRGKGRE
                     LAAEAKPWFLAVNLVNPHDVMFYDTDAPDAPVQSHRGITEVARDPKDPLYAKQWSFAL
                     PSSHSQALDAPGRPPAHAEFLRSHDALVGKIPNEDARWRRRHNYYLNCMRDADRNVET
                     ILAELDAAGLTDRTIVIFTADHGDMDGAHQLHAKGAVAYREQNNVPLIVAHPAYAGGK
                     ECRAITSHLDLAPTILGLAGVRTEQRSTTARSLPGKDFSTLLAAPDRAPLSAVRAAML
                     FNYNMFAYLDGEYLDRVVAFMAQGGNPKEFARSGARPDMLKRGAVRSVYDGRYVFSRY
                     FSPKQHNRPATLEDIYRVNDVELFDTQTDPEEMVNLAAERGRSGELVLAMNEKLSRLI
                     DAEVGEDNGSMLPGGADAGWEVTAETMAP"
     gene            3047..>3233
                     /locus_tag="VIQ99_06600"
     CDS             3047..>3233
                     /locus_tag="VIQ99_06600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182849.1"
                     /translation="MRFWITLIVMSAVVRAACVSDPGGTVGCPGFRAVLTVEDRMSQG
                     ESRFNPNEPIAFKMLITN"
BASE COUNT          547 a         1030 c         1065 g          591 t
ORIGIN      
        1 gtgctcggcg cctttctttg ccctgtatcg aatctcgggt tggcggcgat gtcgctcgtc
       61 ggtccggacc tccgcgtctt cgggacggcg ctcttcctcg agaatttctc cgaagggttc
      121 gcgggcacgg ccctgattgc ctggatgtcg agcctcacga cgttcggcta cgcggccacc
      181 cagtacgcgc tcttgtcgtc cttctacgcg attctcggca aggtcttgaa gggcctatcg
      241 ggtgtcgccg tcgagacact cgaccgctcg ttcgacttgc tgatcgccta cggcctgttc
      301 ttcgcgatca ccgcgtcgat cgccgtgcct tccgtgctgg tcgcgctctg ggccgcgcgc
      361 cttcataggc gtgcacggta gtaaagatcg acgacctcgt ggccgaggcg cacgccgcgg
      421 cgctcgaact tcgtcggtgg ccgcacggcc aacggctccc cgctgaggtc ctctcgtgtc
      481 atcgcggcga agcgtgtgtc gcgctcgagc acctcgcgcg tgtgacgcgc gtagtcggcc
      541 cagtccgtcg cgacatgtag gagaccgccg cgcttcagga cgcgggcgat ttccgtcacg
      601 aatgggggct gcacgatgcg gcgcttgtgg tgacgtttct tcggccacgg atccggaaag
      661 aacaggtcga cggcatcgaa gctcgagtcc ggcaacaact ccggaacgac ttcggttgcg
      721 tcgcgcgcga tcacgcggac gttcttggcg ccggatctct cgagcagcaa cagcaagtgg
      781 ccgatgccgg gctcgtgcac ctctatgccg aggtaatcca cgccgggatg gttcagcgca
      841 ttcgtgacga gcgcctcgcc atcgccgaag ccgatgtcga gcacgcgtcg cgcgtcgcgg
      901 ccgaacaagt cgcgtaggtc gatcggcccg ggcgggcggt cggcattcac gagcggcaga
      961 agctccgcca acgcgcggcg ctgcgccgcc gtcgcacgac cgggtcgacg cacgaagctg
     1021 cggaccttcc gcagccgtct ttccgccgcg tcgggcgtgt ccatgcttct ccccttatga
     1081 ttcgccgcag gcatctgtcg atatacttct gcggcggcga ccgaatcata caagcacaat
     1141 gccgcggctc gagggcgtcg ttcttttgag gagtgggttt gcttgagtga tgagtcgtcg
     1201 ggcggcgctg cgtcgcgccg tgatttcttg gttgccgccg ggctaggggc cgtcgccatc
     1261 ggtgccgggc tcgggtccca agcgcaggcg cagcctggag gcgccggtgc cgtgccggcc
     1321 ggtgcgccga gcggttacaa catcttgttc attctcgtgg accaggagcg ccacttccgc
     1381 aggggcgagc tgccgagcgg atttcgcctg gcggcacacg agcgcctcaa gcggcaaggc
     1441 actacgttcg tgaatcaccg catcaactcg tgcgtctgta cgccgtcgcg ctccgtgatc
     1501 tacacggggc ggcacatcca gcaaaccggc atgttcgaca acacgaactt cccgtggatt
     1561 cagagcatgt ccacggagct cccgactctc ggcgacatgc tccgagaagc cggttactac
     1621 acggcgtaca agggcaaatg gcatttgacc aaggagttcg agacggtcaa cacgctcggg
     1681 acgccgacga agatcttcac ggaagagatg gaggcctacg gcttctcgga ctacttcggc
     1741 atcggcgaca tcattgccca cacgcgcggc ggctaccttc acgacggcgt gatttcctcg
     1801 atggccgtga gctggctgcg cggcaagggc cgcgagcttg cggccgaggc gaagccgtgg
     1861 tttctcgccg tgaacctcgt gaacccgcac gacgtgatgt tctacgacac cgacgcgccg
     1921 gacgctccgg ttcagtcgca tcgcggtatc accgaggtgg cgcgcgatcc caaagatccc
     1981 ctgtacgcga agcagtggag cttcgcgctg ccatcgagcc actcccaggc gctcgatgcg
     2041 ccgggacgtc ctccggcaca cgccgagttc ttacgctcgc acgacgcgct cgtgggcaag
     2101 atcccgaacg aggacgcgcg ctggcgccgg cgccacaact actacttgaa ctgcatgcgc
     2161 gacgccgatc gaaacgtcga aacgatactg gccgagctcg atgcggccgg attgacggat
     2221 cgcaccatcg tgatttttac ggccgatcac ggcgatatgg acggcgcgca tcagctccac
     2281 gccaaagggg cggtcgccta tcgcgagcag aacaacgtgc cgctgatcgt cgcgcatccc
     2341 gcctacgccg gtggcaagga gtgcagagca atcacctcgc acctggatct cgcgccgacc
     2401 atcctcgggc tcgccggcgt acgcacggaa cagcgctcga cgaccgccag gtcgctgccg
     2461 ggcaaggact tctcgacctt gctcgccgca cccgaccgcg cgccgctgag cgccgttcgc
     2521 gccgccatgc tcttcaacta caacatgttc gcgtacttgg acggcgagta cctcgataga
     2581 gtcgtggcct tcatggcgca gggcggcaat ccgaaggaat tcgcgaggag cggggcacgg
     2641 cccgacatgc tgaagcgtgg cgcggttcgg tccgtgtacg acgggcgtta cgtgttcagc
     2701 cgttacttct cgccgaagca gcacaatcgc ccggcgacgc tcgaagacat ttaccgtgtc
     2761 aacgacgtcg agctgttcga cacgcagacg gatccggaag agatggtcaa tctcgcggcc
     2821 gagcgcgggc gctccggcga gctcgtgctg gcgatgaatg aaaaattgag tcgcttgatc
     2881 gacgcggaag tcggtgagga taacggctcg atgctacccg gcggcgccga tgccggttgg
     2941 gaagtgacgg ccgaaacgat ggcgccctag ggtttgcggg cggagctcgt gagggactgc
     3001 actcggctga ggtgagatcg cggttcgatg caggggagag tgcggcgtga ggttttggat
     3061 cacgttgatc gtcatgtcgg ccgtcgtgcg agccgcgtgt gtcagcgatc cgggtggaac
     3121 ggtgggctgt cccgggttca gggccgtgtt gaccgtcgaa gaccgtatga gtcagggcga
     3181 gtcgcggttc aatccgaacg agccgatcgc attcaagatg ctgatcacga aca
//
LOCUS       DATCUD010000445         2129 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_46961, whole genome shotgun sequence.
ACCESSION   DATCUD010000445 DATCUD010000000
VERSION     DATCUD010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2129
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46961"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VIQ99_06605"
     CDS             <1..511
                     /locus_tag="VIQ99_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012521210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEY9182850.1"
                     /translation="RAGLGKIGIFASGSLDESRIQALIAAGAPIDGFGIGTSLDVAAD
                     CPALDCAYKLQEYAGRPRRKRSPGKATWPGAKQVFRHHNPRGELERDVLAPADEPHRG
                     EPLLTPVLRRGELVAPLPSLEASRKHAARELLCLPPRLRSLLPADPYPVEIAPSLDAL
                     AARVDAEFR"
     gene            524..1144
                     /locus_tag="VIQ99_06610"
     CDS             524..1144
                     /locus_tag="VIQ99_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEY9182851.1"
                     /translation="MSHDRIALIVVDVQLDFLPGGALAVAGGERILGPLAALLESGRF
                     RDVVATQDWHPRDHVSFASQHPGRKPYESIQLYGREQVLWPDHCVAGSPGAGLHPELP
                     WDRARAIVRKGMDRAVDSYSAFRNNYDAQGVRPATGLAGYLRELGVTDVHVCGLARDY
                     CVRATAEDAAELGFATTVLWDLTQPVAPARDAATRAALERAGIAIA"
     gene            1263..1694
                     /locus_tag="VIQ99_06615"
     CDS             1263..1694
                     /locus_tag="VIQ99_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013458750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HEY9182852.1"
                     /translation="MTRVAAFDKTIEKTNVWLNQLQATLSWQDRERAYHALRAVLHAV
                     RDRLHPHEAVDLGAQLPMLIRGFYYDGWHPADKPRKYRDKRRFLEHVAKDAPTIAKAD
                     LELVVTAVFGLLSSQLPRGERDQVRRALPASVRELWAQPRL"
     gene            1824..>2129
                     /locus_tag="VIQ99_06620"
     CDS             1824..>2129
                     /locus_tag="VIQ99_06620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182853.1"
                     /translation="MKTLEATLLEDFGPVDRGLVRRGLLAERGINAVFDGPGDHSLTI
                     EYDPATLAGERLLEILCRNGVCPEVVAPPADLAGGERWLEKLRDGRRVLIRPIRASDV
                     "
BASE COUNT          334 a          755 c          711 g          329 t
ORIGIN      
        1 ccgcgccggc ctgggcaaga tcggcatctt cgcgagcggc agcctcgacg agagtcgcat
       61 ccaggcgctc atcgcggccg gcgcaccgat cgacggtttc ggcatcggca cgagcctcga
      121 cgtcgccgcg gattgcccgg cactcgactg cgcctacaag ctccaggagt atgcgggacg
      181 cccgcggcgc aagcgctcgc cgggcaaagc cacctggccc ggcgcgaaac aggtcttcag
      241 gcaccacaac ccgcgcggtg agctcgagcg cgacgtgctc gcgcccgccg acgaaccgca
      301 ccgcggcgaa ccgctgctca cgcccgtgct acgccgcggc gagctcgtcg ctccgctgcc
      361 gtcgctcgag gcgagccgca agcacgcggc gcgagagctc ctctgcctgc cgccgcggct
      421 gcgttcgttg ctccccgcag acccctaccc cgtcgagatc gcaccgagcc tcgacgcgct
      481 cgccgcgcgc gtcgacgccg aatttcgctg agagcggacg cccatgagcc acgaccgaat
      541 cgccttgatc gtcgtcgacg ttcagctcga tttcctgccc ggtggcgcgc ttgccgtggc
      601 cggcggggag cggatcttgg gcccgctcgc ggcgctcttg gagagcggcc gctttcgcga
      661 cgtcgtcgca acgcaggatt ggcacccccg cgaccacgtg tcgttcgcga gccagcatcc
      721 tggacgaaaa ccctacgagt cgatccagct ctacggccgc gagcaggtcc tatggcccga
      781 tcactgcgtc gccggctcac ccggcgccgg gctgcatccc gaactgccgt gggaccgagc
      841 gcgcgccatc gttcgcaagg gaatggaccg cgccgtcgat tcctacagcg cgtttcgcaa
      901 caactacgat gcgcaaggcg tgcggcctgc gacgggtctc gccggttact tgcgcgagct
      961 cggcgtcaca gacgtccacg tctgcgggtt ggcgcgcgac tattgcgtgc gggcgacggc
     1021 cgaggacgct gcggagctcg gctttgcgac gacggtgctc tgggacttga cgcagcccgt
     1081 ggccccggcg cgtgacgctg ccacacgcgc ggcgctcgag cgagcgggca tcgctatcgc
     1141 ctaaggctac cgccctctac gggtcgctcg cgcgccgcgg tcgtgcctct gtacaactgc
     1201 gtatcgccga tcgcgggggt cgagtctacg ctggcacccg atgacggcta cggagaagca
     1261 caatgacgcg cgtcgcggct ttcgacaaaa ccatcgagaa gaccaacgtg tggctcaacc
     1321 agctgcaagc aacgctgtcg tggcaggacc gggagcgcgc ctatcatgct cttcgcgccg
     1381 tgctgcacgc cgtccgcgat cgcctgcacc cgcacgaagc cgtcgacctc ggcgcgcagc
     1441 tgccgatgct gatccgaggt ttctactacg atggttggca cccggccgac aagccgcgga
     1501 aataccgcga caagcgacgg ttcctcgagc acgtcgccaa ggacgcgccg acgatcgcca
     1561 aagcggacct cgagcttgtc gtgacggcgg tattcggcct gctgtcgtcg cagctgccgc
     1621 gcggtgagcg agatcaggtt cggcgtgcct tgcctgccag cgtccgtgag ctgtgggccc
     1681 agccgaggct ctgagagtgt gccgagacgg cccatgcgcg gcacgcgtcg ccgccgacac
     1741 atcctacgta gtagtacgga ctgcgcacgg tccccggaga gccctaaaat gcaagcggcg
     1801 gcgggaaaag gggggtgttc tccgtgaaaa cgctcgaagc cacgttgctc gaagattttg
     1861 gccccgtcga ccgcgggctc gtccgccgcg gcttgctcgc tgagcgcggc atcaatgcgg
     1921 ttttcgacgg gcccggcgat cattcgctga cgatcgaata cgatccggcc actctggccg
     1981 gcgaaaggct gctcgagatc ctctgccgca acggggtctg ccccgaggtg gtcgcgccgc
     2041 cggccgatct cgcaggtggc gaacgctggc tcgagaagct gcgagacggc cggcgcgtat
     2101 tgatccgtcc gatccgcgcg agcgacgtc
//
LOCUS       DATCUD010000446         2661 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_4702, whole genome shotgun sequence.
ACCESSION   DATCUD010000446 DATCUD010000000
VERSION     DATCUD010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2661)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2661)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2661
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4702"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..615
                     /locus_tag="VIQ99_06625"
     CDS             <1..615
                     /locus_tag="VIQ99_06625"
                     /inference="COORDINATES: protein motif:HMM:NF012376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY9182854.1"
                     /translation="TGDIVQDESRAGYERFRSALEPLGVPVLSVPGNHDDPNLMGEIL
                     TSGSFQLGGELRVGPWSIVLLSTFLAGEDAGGLGPARLQGLRQALAVHAGQHVLVAMH
                     HHPLPMGSTWLDGVALRDSAAFWHIIDQHPEVRGVVCGHVHQSADRDRNHVRFMSTPS
                     TCAQFLPGSEFFALDERPPGMRWLELHADGSIDTEVTWAPKVRS"
     gene            591..1481
                     /locus_tag="VIQ99_06630"
     CDS             591..1481
                     /locus_tag="VIQ99_06630"
                     /inference="COORDINATES: protein motif:HMM:NF014066.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraB/GumN family protein"
                     /protein_id="HEY9182855.1"
                     /translation="MGAEGAVMTRHPWLAALALVLPAAAASADPAAWRVAGRNGGEIT
                     LLGSMHVLRQSDHPLPAAVDALLERADSIVMELDLDDVDPVAQQRLIVNTAVLPRGQT
                     LVDVIDADLYRDLERRATELGVQLELLERFEPWFLSITLLDQGLGKFGFEGQYGIEQY
                     VLAQAQRSGKEIAGLETMEFQIGIFDSQPASAQQAMLAQTLAELDEAETAMAEMAAAW
                     RAGELEELSDELLEEFADFPGLYETLVTKRNAAWVETLERLLRDGRRHLVVVGALHLV
                     GDDSLIELLAARGHAVERVD"
     gene            complement(1486..1650)
                     /locus_tag="VIQ99_06635"
     CDS             complement(1486..1650)
                     /locus_tag="VIQ99_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEY9182856.1"
                     /translation="MKKYMCLICGFVYDEAEGRPDEGIPPGTKWADIPLSWRCPDCGS
                     GKEDFEMVEV"
     gene            complement(1724..>2661)
                     /locus_tag="VIQ99_06640"
     CDS             complement(1724..>2661)
                     /locus_tag="VIQ99_06640"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEY9182857.1"
                     /translation="LGGSKYFVVEADEYDTAFFDKRAKFVHYRPRTLIVNNIEYDHAD
                     IYADVDAILWQFHQLVRTVPGSGLIIANGKDDNIARLLKRGVWTPVVTFSASQQAARW
                     FGRYDALGAESRFSVLENGVLRGSGRWSLLGVHNLENALAAIAAAGHVGVTPDVALAA
                     LAEFKGVKRRLEHRGTFGGISLYEDFAHHPTAIATTLAGLKSRAPKQRIVAVMEPRSN
                     TMRMGVHRDTLAASFADADRVFVLAARDLGFDPAASLSSLGARLTLGPDVQTLLARLL
                     EELEPGDQVVLMSNGGFDGLPALLQRALEGRAAAG"
BASE COUNT          422 a          926 c          897 g          416 t
ORIGIN      
        1 accggcgaca tcgtccaaga cgagagccgc gccggctacg agcgcttccg ctcggcgctc
       61 gagccgctcg gcgtccccgt gctgtcggtt cccggcaacc acgacgaccc gaatctgatg
      121 ggcgagatcc tgacgagcgg ctcgttccag ctcggcggcg agctacgcgt gggcccgtgg
      181 tcgatcgtgt tgctcagcac gtttctcgcg ggcgaggacg cgggcggcct cggacccgcg
      241 cgactccagg ggctgcgcca agcgctcgcg gtgcacgcgg gccagcacgt gctcgttgcg
      301 atgcaccatc acccgctgcc gatgggcagc acttggctcg acggcgtcgc gctccgcgat
      361 agcgcggcct tctggcacat catcgatcag caccccgagg tccgcggcgt cgtctgcggc
      421 cacgtgcatc aatccgcgga ccgcgaccgc aatcacgtgc gcttcatgag cacgccgtcg
      481 acgtgtgcgc aattcctgcc gggcagcgag ttcttcgcgc tcgacgagcg gccgcccggc
      541 atgcgctggc tcgagctcca tgccgacggc agcatcgaca cggaggtcac atgggcgccg
      601 aaggtgcggt catgacgcgc catccttggc tcgcggcgct cgcgctcgtg ttgccggctg
      661 cggccgcctc ggcggatccc gcggcgtggc gcgtagcggg ccgcaacggc ggcgaaatca
      721 cgctgctcgg ctcgatgcac gtgctccgcc agagcgatca tccgcttccg gcagcggtcg
      781 acgcgttgct cgagcgcgcc gactcgatcg tcatggagct cgatctcgat gacgtcgacc
      841 ctgtcgcgca gcagcggttg atcgtgaaca ctgccgttct accgcgaggt caaacgctcg
      901 tggacgtcat cgacgcggat ctctatcggg atctcgagcg gcgcgcgacc gagctcggag
      961 tgcagctcga gctgctcgag cgcttcgagc cgtggtttct ctcgatcacg ctgctcgatc
     1021 agggcctcgg caagttcggc ttcgagggcc agtacggcat cgagcaatac gtgctggcgc
     1081 aagcgcagcg cagcggcaag gagatcgccg ggctcgagac gatggagttt cagatcggca
     1141 tcttcgactc gcagccggca tcggcgcagc aagcgatgct ggctcagacg cttgccgagc
     1201 tcgacgaggc ggaaaccgca atggccgaga tggccgctgc atggcgcgcc ggcgagctcg
     1261 aagagctcag cgacgagctg ctcgaagaat tcgccgactt tccgggcctc tatgagacgc
     1321 tcgtgacgaa gcgcaacgcc gcgtgggtcg agactctgga gcggctgctc cgcgacggcc
     1381 ggcggcatct cgtggtggtc ggcgcgctgc acctcgtcgg agacgacagc ttgatcgagc
     1441 tcctggccgc acgcggccac gccgtcgaac gcgtcgactg atcgatcaca cctcgaccat
     1501 ctcgaaatct tccttgccgg agccgcaatc ggggcaccgc cacgaaagcg ggatatcggc
     1561 ccacttcgtc cccggtggga tgccctcatc ggggcggccc tcggcttcgt cgtacacgaa
     1621 gccgcagatc agacacatgt acttcttcac ggcggcaagc gtagcacgag cggcgcgcgc
     1681 gccggctcag ccagagctat gaggacgcgg cggctcgggc acttcagccc gcggccgcgc
     1741 gaccctcgag cgcgcgctgc agcagcgccg gcaagccgtc gaagccgccg ttcgacatca
     1801 agacgacctg atcgccgggc tcgagctcct cgagcaatcg cgcgagcagg gtctgcacgt
     1861 ccgggccgag cgtcaggcgc gcgcccagcg agctcagcga ggccgccggg tcgaagccga
     1921 ggtcgcgtgc cgcgagcacg aagacgcggt ccgcatccgc gaacgatgcg gccaacgtgt
     1981 cgcggtgcac gcccatgcgc atcgtgttcg agcgcggctc catgaccgcg acgatccgct
     2041 gcttcggcgc acggctcttc aagcccgcga gcgtcgtcgc gatcgcggtc ggatggtgtg
     2101 cgaagtcctc atacagactg atgccgccga acgtcccgcg atgctcgagc cgtcgcttga
     2161 cgcccttgaa ctccgcgagc gccgcgagcg cgacatccgg cgtcacgccg acgtgccccg
     2221 ccgccgcgat cgccgcgagc gcgttctcga ggttgtgcac cccaagcagc gaccagcgcc
     2281 cgctaccgcg cagcactccg ttctcgagca cgctgaaccg ggactccgcg ccgagcgcgt
     2341 cgtagcggcc gaaccaacgc gcggcctgct gggaggcgct gaacgtcacg accggcgtcc
     2401 agacgccgcg tttcagcagg cgcgcgatgt tgtcgtcctt gccgttcgcg atgatgaggc
     2461 cgctgcccgg cacggtacgc acgagctggt gaaactgcca aaggatcgcg tcgacgtcgg
     2521 cgtagatgtc ggcgtggtcg tattcgatgt tgttcacgat cagcgtgcgc ggccggtagt
     2581 gaacgaactt cgcgcgcttg tcgaagaacg ccgtgtcgta ctcgtccgcc tcgacgacga
     2641 agtacttcga gccgccgagc c
//
LOCUS       DATCUD010000447         1944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_68498, whole genome shotgun sequence.
ACCESSION   DATCUD010000447 DATCUD010000000
VERSION     DATCUD010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68498"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..1047
                     /locus_tag="VIQ99_06645"
     CDS             40..1047
                     /locus_tag="VIQ99_06645"
                     /inference="COORDINATES: protein motif:HMM:NF012509.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182858.1"
                     /translation="MIHARAPGKLVALGEYAVLEGAPAVVLAVDRYAEATIAPSPDGL
                     CHLATRAAEPVEVRFAPGAPSGSALVDLVVAAVDPALAWRATLDSSALYSGGAKLGLG
                     SSAAVLCSWAGAFAAFARARGRAVPEWTLARLIELHRAFQGGRGSGIDVAAAFRGGAV
                     SFRLGPGGMPQVGSVRVPNGVGFAGIFPGRSASTPEFLGRYRAWQRERPDEAAAMLGR
                     LRGLAEAGVAALEAEDAAAWLEAFTGYGRALDELGEAIGAEIVTAEHRQIGEEASRFG
                     VAYKVSGAGGGDLGLACATDFGALAAFTKSVGNRGFRVINVSLAEHGLVVQQQTAGDR
                     A"
     gene            1044..>1944
                     /locus_tag="VIQ99_06650"
     CDS             1044..>1944
                     /locus_tag="VIQ99_06650"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004420 - hydroxymethylglutaryl-CoA
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0016054 - organic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEY9182859.1"
                     /translation="MSRDRLRIPEFYKLSVEERVRLVHERGLIDQADFRALSTGQHTL
                     DLDSADKMVENVVGVMGMPLGLGMNLVVNDKQYIVPMVVEEPSVIAAMGSACKLIRAC
                     GGFKAEATDPILIGQIQIVNPPDMERAKRALRARRKDIINLANSLHPNMVARGGGARD
                     IELFVHPLPSSAKQMLVVHLLVDTRDAMGANLVNGMCEGVAPLVESITGGEVFLRILS
                     NLSDRSLARAQCKIPVEQLAGRGYTGVQARDGIIVAAEFAAVDPYRAATHNKGIMNGI
                     DPVAIATGNDWRAIEAGAHAYAAR"
BASE COUNT          286 a          611 c          732 g          315 t
ORIGIN      
        1 ttgacgagcc ggctcgggcc gggcgcggag ctctgctgag tgatccacgc gcgcgccccc
       61 ggcaagctcg tggctctcgg cgagtacgcc gtgctggaag gggcgccggc ggtcgtgctg
      121 gccgtcgatc ggtatgccga agcgacgatc gcgccgagcc cggacggcct gtgccacctc
      181 gcgacacgtg cggcggagcc cgtcgaggtg cgcttcgcgc cgggggctcc gagcgggtcg
      241 gcgctcgtcg atctcgtcgt ggccgccgtt gacccggcgc ttgcatggcg cgcgacactc
      301 gattccagcg ccctgtactc ggggggcgcg aagctgggct tggggtcgag cgcggcggtc
      361 ctctgctcgt gggcgggcgc gttcgccgcg ttcgcgcgtg cccggggccg tgcggtgccg
      421 gaatggacgc tggcacgcct gatcgagctg caccgggcgt tccaaggggg gcggggcagt
      481 ggtatcgacg tggccgcggc gttccgggga ggggcggtct cgttcaggtt gggccccgga
      541 ggcatgcccc aagttggttc agtccgggtg ccgaacggtg taggattcgc gggtattttt
      601 ccgggccggt cggcctcgac gcctgaattt ctaggccgct atcgggcctg gcagcgagaa
      661 cggccggacg aggcggccgc catgctcggt cgcctgcgcg gcctcgcaga ggccggtgtc
      721 gcggcgctcg aggcggagga cgccgccgcg tggctcgaag cgttcacggg ctacggccgt
      781 gcgctcgacg aactggggga agcgatcggg gcagagatcg tcacggccga gcaccggcaa
      841 atcggggagg aagcgagtcg gttcggcgtc gcttacaagg tgagcggcgc gggtgggggc
      901 gatctcgggc tcgcgtgcgc gactgacttc ggcgcgctcg cggcattcac gaagtcggtg
      961 ggaaatcggg gttttcgagt gatcaatgtc tcgctggccg agcacggcct cgtagtgcaa
     1021 cagcagacgg ccggagatcg agcgtgagcc gcgaccggtt gcgtattcca gagttctaca
     1081 agctgagcgt cgaggaacgc gtccggctcg ttcacgagcg cggcctcatc gatcaggcgg
     1141 atttccgcgc gctgtccacg gggcagcaca cgctcgacct cgactccgcc gacaagatgg
     1201 tcgagaacgt cgtcggcgtc atgggcatgc cgctcggctt gggcatgaac ctcgtcgtca
     1261 acgacaaaca atacatcgtg ccgatggtcg tcgaagagcc atcggtgatc gcggcgatgg
     1321 gctcggcgtg caagttgatt cgggcgtgcg gaggcttcaa ggcggaagcg acggatccga
     1381 tcctgatcgg ccagatccag atcgtgaacc cgcccgacat ggagcgggcc aagcgcgcgt
     1441 tgcgcgcgcg caggaaggac atcatcaacc tcgcgaacag cctgcacccg aacatggtcg
     1501 cgcgcggcgg cggtgcccgc gacatcgagc tgttcgtgca tcccttgccg tcgagcgcga
     1561 agcagatgct cgtcgtgcac ttgctggtcg acacgcgcga tgcgatgggc gcgaatctcg
     1621 tgaacggcat gtgcgaaggc gtcgcgccgc tcgtcgagtc gatcacgggc ggcgaggtgt
     1681 ttctgcggat cctgtcgaat ctctccgatc gctcgctcgc tcgcgcgcag tgcaagattc
     1741 cggtcgagca gctcgcgggc cgcggctaca ccggcgtgca ggcgcgcgac ggcatcatcg
     1801 tcgcggccga gttcgcggcc gtggacccgt atcgtgccgc gacgcacaac aagggcatca
     1861 tgaacggcat cgacccggtc gcgatcgcga ccggcaacga ttggcgcgcg atcgaggccg
     1921 gcgcccatgc ctatgcggcg cgtg
//
LOCUS       DATCUD010000448         1919 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18730, whole genome shotgun sequence.
ACCESSION   DATCUD010000448 DATCUD010000000
VERSION     DATCUD010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18730"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..621)
                     /locus_tag="VIQ99_06655"
     CDS             complement(<1..621)
                     /locus_tag="VIQ99_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011687506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HEY9182860.1"
                     /translation="MKSRWFLLFAAAFGAGCQPSDEELAARYEGAVRTYCLECHDDAG
                     REAGLTLEGVDLDAVAAHPELFEKIARKLRGRQMPPLGGPRPDAETYDGFAAYLERRL
                     DAAALANPEPGRASIHRLNRTEYGNAVRDLLALEVDAAEFLPADDEGYGFDNIADVLR
                     VSPSLLEQYLSASAKIAALAVGDPNAPSVTAVYRAPSDLAQASHIEG"
     gene            883..>1919
                     /locus_tag="VIQ99_06660"
     CDS             883..>1919
                     /locus_tag="VIQ99_06660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014248116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY9182861.1"
                     /translation="MARQKPLKLYRNIGIIAHIDAGKTTTTERVLYYTGKKHQIIEVH
                     DTKDGKTSTTTDYLEQERKRGITIQSAAVSCEWKGYQVNLIDTPGHVDFTIEVNRSLR
                     VLDGAVVVFDGVAGVEPQTETNWRLANQYNVPRMCYVNKMDRMGANFTHCVKGIKERL
                     SPKAVVCHVPLGSYDEFCGMADLIAGAAYIWDSDDKDAKWETVPLDKLEGRFNFAAAG
                     DNAWIKRIPELRQELLEHALALNEDAFMEFVENGKFDQDVLKACIRKGTVSGEFVPIF
                     CGSSFKNKGVQQLLDAVLDYLPYPGENGGIGMVDPDGKVIGTQEVKDEAPARALAFKV
                     INDQFGTLTFVR"
BASE COUNT          376 a          626 c          620 g          297 t
ORIGIN      
        1 cccttcgatg tgcgaagcct gcgccaagtc cgaaggagct cggtacacgg ccgtcacgga
       61 cggtgcgttc ggatcgccga ccgcgagcgc ggcgatcttc gccgacgccg agaggtattg
      121 ctcgagcaac gacggcgata cacgcagcac gtcggcgatg ttgtcgaagc cgtagccttc
      181 gtcgtcggcg ggcaggaact cggccgcatc gacctcgagc gcgagcaagt cgcggacggc
      241 attaccgtac tcggtgcgat tcaagcggtg gatcgaggcc ctacccggct cgggattggc
      301 gagcgcggcg gcgtccaagc gccgttccag ataggccgcg aatccgtcgt aggtctcggc
      361 atcgggccgc ggcccgccga gcggcggcat ctgccggccg cgcagcttgc gcgcgatctt
      421 ctcgaacagc tcgggatgtg cggccacggc gtcgaggtcg acgccttcga gcgtcaggcc
      481 cgcctcgcgt cctgcgtcgt cgtgacactc gaggcaatag gtgcggaccg cgccctcgta
      541 acgcgccgcg agctcctcgt cggacggctg acagcccgcc ccgaacgcgg ccgcgaagag
      601 caagaaccac cggcttttca taagcaacgc gaaaccctcg aaatacccgc ccagcctgcc
      661 gcagaccttg ggcccgcgcc agccggaaat ccttaaaaaa gatcagcggc ggcgccgttt
      721 tggcttggcc cgtcggcccc attggggtac agtggcgccc cgctggaagg ccgggcctcc
      781 ccgccccttc agctccctaa gatcgcggca acgctagctg agttgccccg gcggtcggtt
      841 tacgccgccg gcattccgta ttttgaacga gacgacgaga ttatggccag gcaaaagccc
      901 ctcaagctgt accgcaacat cggcatcatc gcccacatcg atgcgggtaa gaccacgacc
      961 accgagcgcg tgctctatta cacgggcaag aagcaccaga tcatcgaagt ccacgacacc
     1021 aaggacggca agaccagcac gaccacggac tacctcgagc aggagcgcaa gcgcggcatc
     1081 acgattcaga gcgcggccgt ctcgtgcgag tggaagggtt atcaagtcaa cttgatcgac
     1141 accccggggc acgtcgattt cacgatcgag gtgaaccgca gcttgcgcgt gctcgacggc
     1201 gccgtcgtcg tgttcgacgg cgtggccggt gtcgagccac agacggagac gaactggcgc
     1261 ctagcgaacc agtacaacgt tccgcgcatg tgttacgtga acaagatgga ccgcatgggc
     1321 gcgaacttca cgcactgcgt gaagggcatc aaggagcgcc tgagcccgaa ggccgtcgtg
     1381 tgccacgtgc cgctcggcag ctacgacgag ttctgcggca tggccgacct catagccgga
     1441 gccgcctaca tctgggactc ggacgacaag gatgcgaaat gggagaccgt gccgctcgac
     1501 aagctcgagg gccggttcaa cttcgcggcc gccggcgaca acgcgtggat caagcgcatt
     1561 ccggagctgc ggcaggagtt gctcgagcac gcgctcgcgt tgaacgagga cgcgttcatg
     1621 gagttcgtcg agaacggcaa gttcgatcag gacgtgctga aggcgtgcat ccgcaagggc
     1681 acggtcagcg gcgagttcgt gccgatcttc tgcggctcgt cgttcaagaa caaaggcgtg
     1741 cagcagttgc tcgacgccgt cctcgactac ctgccctacc ccggcgagaa cggcggcatc
     1801 ggcatggtcg atccggacgg taaagtcatc ggcacgcaag aggtcaagga cgaagcgccg
     1861 gcccgcgcgc tcgccttcaa ggtcatcaac gaccaattcg gcacgctgac gttcgtgcg
//
LOCUS       DATCUD010000449         2682 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_39959, whole genome shotgun sequence.
ACCESSION   DATCUD010000449 DATCUD010000000
VERSION     DATCUD010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39959"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1338
                     /locus_tag="VIQ99_06665"
     CDS             <1..1338
                     /locus_tag="VIQ99_06665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008891989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182862.1"
                     /translation="YGVIGGCGLGLGYVSPVSTLIRWFPDRRGMATGMAIMGFGGGAI
                     IGAPLKRFFIRAFYEQPEYLGTVDQVSLVTEGGRRFAEIAGQLREVVIVGANDVNGMI
                     VRGAEGVYAVGTGNAGVAETFITLGLIYFVVMLAAAFSYRLPAPGWKPAGWVPPDEAH
                     RAQRMISTHNVHIDEALKTRQFYQLWIVLCFNVTAGIGVLSVAQTMMTEIFGTTLPAI
                     VDSSFAATYVVMISLFNMIGRFVWASSSDYLGRRNTYWIFFALGIVLYVSIPWVANQV
                     SVNPAVIWLVYFYAATMIIFTMYGGGFATIPAYLADMFGTRYVGGIHGRLLTAWSLAG
                     WLGPMAITRLRERSIDTAIRDLAASVDPERFRQAFGAGVEQLDALVSQQTVTIAKLME
                     IAPPGTVDPTPSLYNLTMYLMAALLAIALVANALMRPVDAKHHMSETQTASAR"
     gene            1340..2572
                     /locus_tag="VIQ99_06670"
     CDS             1340..2572
                     /locus_tag="VIQ99_06670"
                     /EC_number="3.4.13.19"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEY9182863.1"
                     /translation="MRRRSGISIMLAFGALCGCGGAETEQRSTATESAPFTLDTHIDI
                     PLDFATAAIDPLNADLQVNLEKMVAGGLSAGFFIVYVGQSARTDEGYAQAQADALTKF
                     AAIHRMAELYPERVEIAYRVDDVARIAASGKVVAAIGVENGFTLGRNIEMLDRFHELG
                     ARYVGLVHDGDNDLGRSARPSPELGDPTEATTGITDLGAAAIARLNRLGIMVDVSHGS
                     KQTALDAMRLSAAPVIASHSGIASVNAHARNMDDETLLALKADGGVVQVVAYDAYLKH
                     QPDEQVTALRALRERFGLTARPPSALAAEQRAAYDDALREIQARWPPASVADLVDHVD
                     YAVRLIGVDHVGLSSDFGGGGGVTGWNDATETRNVTAELKRRGYNDADIAKIWSGNLL
                     RAWRAAEDTAAALAAANP"
BASE COUNT          448 a          901 c          885 g          448 t
ORIGIN      
        1 tacggcgtga tcggcggctg cggcttgggg ctcggttacg tgtcgccggt cagcacgctg
       61 atccggtggt tcccggatcg ccgcggcatg gccaccggca tggccatcat gggcttcggc
      121 ggcggcgcga tcatcggcgc accgctgaaa cgattcttca tccgagcctt ctacgagcaa
      181 cccgagtatt tgggcacggt cgatcaggtc tcgctcgtga ccgagggtgg ccggcggttc
      241 gccgagatcg ccgggcagtt gcgcgaggtc gtgatcgtcg gcgccaacga cgtcaacggc
      301 atgatcgtgc gcggcgccga gggcgtttac gccgtcggca ccggcaacgc cggtgtcgcc
      361 gagacattca tcacgctggg cctgatctat ttcgtcgtga tgctggccgc cgcattctcg
      421 taccggctgc cggcaccggg ctggaaaccg gccggctggg tgccgcccga cgaggcccac
      481 cgcgcgcagc gaatgatcag cacgcacaac gtgcacatcg acgaggcgct gaagacgcgg
      541 cagttctatc agctgtggat cgtgctgtgt ttcaacgtca ccgccggcat cggcgtgctc
      601 agcgtcgctc agacgatgat gaccgagatc ttcggcacga cgctgccagc gatcgtcgac
      661 agcagcttcg cggcgacgta cgtcgtcatg atcagcctgt tcaacatgat cgggcgcttc
      721 gtatgggcca gctcgtctga ctacctcggc cgccgcaaca cttactggat cttcttcgcg
      781 ctcggcatcg tgctgtacgt ctcgattccg tgggtcgcga accaagtcag cgtgaatccg
      841 gccgtgatct ggctcgtgta tttctatgcc gccacgatga tcatcttcac gatgtacggc
      901 ggcgggttcg cgacgattcc ggcgtatctc gccgacatgt tcggcacgcg ctatgtcggc
      961 ggcatccatg gacggctgct cacggcctgg agcctcgcgg gatggctcgg acccatggcg
     1021 atcacgcgac tgcgcgagcg ctcgatcgac acggcgattc gcgacctcgc cgcgagcgtc
     1081 gatccggagc gcttccgtca ggccttcggc gccggcgtcg agcaactcga cgcgttggtc
     1141 tcgcagcaga cggtcacgat tgcgaagctc atggagatcg cgccgccggg aaccgtcgat
     1201 ccgacgccga gcctctacaa cctcacgatg tacttgatgg cggcgttact cgcgatcgcg
     1261 ctcgtggcca acgcgctgat gaggccggtc gatgccaagc atcacatgag cgaaacccaa
     1321 acggcgtcgg cgcgctagca tgcggcggcg aagcggcatc tcgatcatgc tcgcgttcgg
     1381 cgcactctgc gggtgcggcg gcgcggagac cgagcagcgc agcactgcaa cggagagcgc
     1441 gccgttcacg ctcgacacgc acatcgacat cccgctcgac ttcgccacgg ccgcgatcga
     1501 tccgctgaac gccgaccttc aggtcaatct cgaaaagatg gtcgcaggcg gtttgagcgc
     1561 gggcttcttc atcgtctatg tcggtcaatc cgcccgcacc gacgagggct acgcgcaggc
     1621 gcaagccgac gcgctgacga agttcgcggc gattcatcgc atggccgagc tctaccccga
     1681 gcgcgtcgag atcgcgtatc gcgtcgacga cgtcgcgaga atcgcggcct cgggcaaagt
     1741 cgtcgcggcc atcggcgtcg agaacggctt cacgctgggc cgaaacatcg agatgctcga
     1801 ccgcttccac gagctcggcg cgcgctacgt cggcctcgtg cacgacggtg acaacgacct
     1861 agggcgctcg gctcgcccca gtcccgagct cggcgatccc accgaagcga cgacgggcat
     1921 caccgacctg ggcgccgctg cgatcgcacg gctgaaccgg ctcggcatca tggtcgacgt
     1981 atcgcacgga tcgaaacaga ccgcgctcga cgcgatgcgc ctgtccgcgg ctccggtgat
     2041 cgcgtcgcat tccggtatcg cgagcgtcaa tgcgcacgcg cggaacatgg acgacgagac
     2101 gctgctcgcg ctgaaggccg acggcggcgt cgtccaagtc gtggcatacg acgcatactt
     2161 gaagcatcag cccgacgagc aagtcaccgc gctacgcgcg ttgcgcgagc gcttcgggct
     2221 cacggcgcgg ccgccgagcg cgttggctgc ggagcaacgc gctgcctacg acgacgcctt
     2281 gcgcgaaatt caggcgcgct ggccgcccgc gtccgtcgcg gacctcgtcg atcacgtcga
     2341 ctatgcggtc aggctgatcg gcgtcgacca cgtgggcttg agctcggact tcggcggcgg
     2401 cggcggcgtg accggctgga acgacgcgac cgaaacgcgc aacgtcacgg ccgagctgaa
     2461 acggcgcggg tacaacgacg cggacatcgc caagatctgg agcggaaatc tgctgcgcgc
     2521 gtggcgagcc gccgaagaca ccgcggccgc gctcgccgca gcaaacccct gatcggccgc
     2581 gctacttggc cgcgggcacg cgccagatgc tggtctggcg catcacgtcg gcgaccttac
     2641 cggtgcgctt cagcgccgtc ggctgcttgg cgtaatacgc ct
//
LOCUS       DATCUD010000450         5115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103719, whole genome shotgun sequence.
ACCESSION   DATCUD010000450 DATCUD010000000
VERSION     DATCUD010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103719"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1740)
                     /locus_tag="VIQ99_06675"
     CDS             complement(<1..1740)
                     /locus_tag="VIQ99_06675"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182864.1"
                     /translation="MPSIAPNSRALVAALLAALACSAVSAQTRTLRPVTDAMLQNPDA
                     ADWLSWRRTLNHWGYSPLEQVNKRNVGQLRLVWTRPLAQGVQEGTPLVHDGVMFFPNP
                     NDITQAIDATTGDLIWEYRRPVQDDNAEYIPFPSINRNLAIYGNFILDNGADNFAYAL
                     DARTGALAWETQILDYRRGAQHSSGPIVANGKVISGRSCEPEGGPEACVITAFDATTG
                     KEVWRTRTIPKPGEPGGDSWGDIPYEERRHVGLWMVPSFDPELNRIYVGTSVTSPAPK
                     FMLAGNDKQYLYHNSTLAIDADTGRVVWYLQHNVDHWDLDHPFERILIDTTVAPDPSA
                     VAWINPRVRSGQSYKVVTGVPGKTGLVYTIDRETGQFLWARPTVEQNVIASVNTESGA
                     GVVNEEKLFTGPNQDMLVCPSLTGGKNYHAGAYSPQTRLMYMPLQNVCMTSMSTAARP
                     SLDELYAIRTKDQIAPGRENVGTIEAISVETGRTIWKREQRAGQTSLMTTAGGLLFGG
                     DTAGRFRAYDAETGAVLWEVNLGSHVTGFPAAFAVNGKQYIAVSTGATPNTFGLATLT
                     PESRAGTANNLYVF"
     gene            complement(1758..3032)
                     /locus_tag="VIQ99_06680"
     CDS             complement(1758..3032)
                     /locus_tag="VIQ99_06680"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182865.1"
                     /translation="MQTGNEPSETSRNGILTTLGSTIGLALGPSVIANLTVSAYITPI
                     EREFGWTRVEVSLAFTIVAYMIVLVSPLQGLLVDRYGPRRVILTSIPLFALSLAAIYF
                     TPPNLYAYYFLWALVPVFGLGLWPLGYLQSVTPWFDRKLGLALGCANAGIGVGSTLLP
                     VFVLAPIIAAYSWRHAVLAVAALVLFVSWPVVAYCLREPTPEEVAARKQSAAARSFGL
                     PFLEAVRQPTFWTLNLGFLLLGITATSLVTQQAPLLQDAGWTPAETARLQTTFGFGLL
                     FARVAVGYVIDHIFAPRVLTTVSIGGAVACVLYAVRPDLGYVSALLLGFLLGAEFDVL
                     AFLIKRYYGNVAYGRIYGVIFAVFYLGSGLGIWALPKLRELSADSSYDNGLYVAAAIL
                     AASAILMAFMPRYRYDAGHSAEAAAAPAPQKA"
     gene            complement(3219..4985)
                     /locus_tag="VIQ99_06685"
     CDS             complement(3219..4985)
                     /locus_tag="VIQ99_06685"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9182866.1"
                     /translation="MTRAAGLVAVVGAATLPFAALAQQAPQPPQATANLTPVTDAMLA
                     NPAPEDWPMWRRTLNNWGYSPLDQINTRNVSQLKLVWSRPLGDGGYQEGTPLVHDGIL
                     YFPNPNDVTQALNAVTGDFIWEFRRKVPEDVGQYFPAAETNRNLAIYDNLILDNGADG
                     FAYALNARTGELVWETKILDYRTGAKNSSGPIIANGKVISGRSCEPEGGPEACVITAF
                     DAKTGRELWRTRTIPKPGEPGDETWGDIPYEKRWHVGMWMVPSFDPELNRIYVGTSVT
                     APAPKYMLGGNREQHLYHNSTLALDGDTGEIVWYFQHVVDHWDLDHPFERLLVDTVVA
                     PDPDSVKWINPRVRSGERRKVITGVPGKTGIVYTLDRETGDFLWARETTMQNVISDIN
                     VESGAATVNPDKIFTAPGQEKLICPSTSGGKNYPAGTYSPLTGVMFYPLNNTCMSATS
                     ANEIVDTDVTYALRNRVQITPGTDNVGVIEAISVQTGETVWKREQRAGQLSLMSTGGG
                     LVFGGDVNGRFRAYDQRSGDVRWEVNLGAPVNGYPVTFAVDGKQYVAVSTGGSGLALG
                     LVSLTPDLRPGLRNQLFVFALP"
BASE COUNT          856 a         1654 c         1705 g          900 t
ORIGIN      
        1 gaacacgtac aggttgttcg cagtgcctgc gcgcgactcc ggagtcaagg tcgccaagcc
       61 gaacgtgttc ggcgtcgcgc cggtgctgac cgcgatgtat tgcttgccgt tcacggcgaa
      121 tgcggccggg aagcccgtga cgtgcgagcc caggttcact tcccagagca cggcgcccgt
      181 ctcggcatcg taggcgcgga agcggcccgc cgtgtccccg ccgaacagca gcccgcccgc
      241 ggtcgtcatc agcgatgtct gccccgcgcg ctgctcgcgc ttccagatcg tgcggcccgt
      301 ctcgacggag atcgcctcga tcgtgccgac gttctcacgg cccggcgcga tctgatcctt
      361 cgtccggatc gcatatagct cgtcgaggct ggggcgcgcc gccgtcgaca tcgaggtcat
      421 gcacacgttc tggagcggca tgtacatcag tctcgtctgc gggctgtacg ctccggcgtg
      481 gtaattcttg ccgcccgtga ggctcgggca cacgagcatg tcctggttcg ggcccgtgaa
      541 cagcttctcc tcgttcacga cgccggcgcc ggactcggtg ttcaccgacg cgatcacgtt
      601 ttgctcgacc gtaggccggg cccagaggaa ctggcccgtc tcgcgatcga tcgtgtacac
      661 gagcccggtc ttgcccggca cccccgtgac gaccttgtag ctctgcccgg agcgcacgcg
      721 cggattgatc caggcgaccg cgctcgggtc cggcgccacg gtcgtgtcga tcaggatgcg
      781 ctcgaacgga tggtcgagat cccagtgatc gacgttgtgc tgtaggtacc agacaacccg
      841 gccggtgtcg gcgtcgatcg cgagcgtgct gttgtggtac aggtactgct tgtcgttgcc
      901 ggcgagcatg aacttcggcg ccggcgacgt gaccgacgtg ccgacgtaga ttcgattcaa
      961 ctccggatcg aagctcggca ccatccacag cccgacgtgg cggcgttcct cgtacggaat
     1021 gtcgccccac gagtctccgc cgggctcgcc gggcttcggg atcgtgcgcg tgcgccagac
     1081 ttccttgccg gtcgtcgcat cgaacgccgt gatcacgcag gcctcggggc cgccttccgg
     1141 ctcgcagctc cttcccgaga tgaccttgcc gttcgcgacg atcgggcccg agctgtgctg
     1201 cgcgccgcgg cggtaatcga gtatctgcgt ttcccacgcc aacgcgccgg tccgcgcatc
     1261 gagcgcatag gcgaaattgt cggcgccgtt gtcgaggatg aagttgccgt agatcgcgag
     1321 attgcggttg atcgacggga acgggatgta ctctgcgttg tcgtcctgca cgggcctgcg
     1381 gtactcccag atcaggtcac cggtcgtcgc gtcgattgcc tgcgtgatgt cgttcggatt
     1441 cgggaagaac atcacgccgt cgtgcacgag cggcgtccct tcctgcacac cctgcgcgag
     1501 tggtcgcgtc cacacgagcc tgagctgacc gacgttgcgc ttgttcacct gctcgagcgg
     1561 gctgtagccc cagtgattca acgtgcgccg ccacgacagc caatcggcgg cgtccgggtt
     1621 ctgcagcatc gcgtccgtga cgggccgcag cgtgcgcgtc tgcgcggaca cggcggagca
     1681 ggcgagcgcg gcgagcaggg ccgcgaccag agctcgagag ttcggtgcaa tcgagggcat
     1741 ggacgtctcc ggttcgatca agctttttgc ggcgcgggag cggccgcggc ctcggcgctg
     1801 tgcccggcgt cgtagcggta tctcggcatg aacgccatca ggatcgccga cgccgcgaga
     1861 atcgcggcgg ccacgtacag gccgttgtcg tagctcgagt ccgccgacaa ctcgcgaagc
     1921 ttcggcaacg cccaaatccc taggcccgag ccgaggtaga acaccgcgaa gatcacgccg
     1981 tagattcggc cgtacgcgac gttgccgtaa tagcgcttga tcaggaaagc gagcacgtcg
     2041 aactcggcac cgagcagaaa gccgagcagc aacgcgctca cgtaacccaa gtcggggcgc
     2101 accgcgtaca gcacgcaagc gacggcgccg ccgatcgaga cggtcgtcaa cacgcgcggc
     2161 gcgaagatgt gatcgatcac gtaaccgacc gcgacgcgcg cgaacagcag gccgaagccg
     2221 aacgtcgtct gtaggcgcgc ggtctccgcg ggcgtccagc cggcgtcctg gagcaacggc
     2281 gcctgttgcg tcacgaggct cgtggccgta atgccgagca ggaggaaacc caagttcagc
     2341 gtccagaacg tgggttgacg aaccgcctcg agaaacggta ggccgaagga gcgcgcggcg
     2401 gccgactgct tgcgcgcggc tacctcctcg ggcgtgggct cgcgcaggca atacgcgacg
     2461 acgggccagc tcacgaacag cacgagcgcg gcgaccgcga gcacggcgtg ccgccagctg
     2521 tacgcggcga tgatcggtgc gagcacgaag accggcagca gcgtgctgcc gacgccgatg
     2581 ccggcattcg cgcagcccaa tgccaacccg agcttgcgat cgaaccacgg cgtgaccgat
     2641 tgcaggtagc cgagcggcca gaggccgagc ccgaacacgg gcacgagagc ccagaggaag
     2701 tagtacgcgt acaggttcgg cggcgtgaag tagatcgcgg ccaggctcaa cgcgaacaac
     2761 ggaatcgacg tcagaatcac gcgccgtggg ccgtagcgat cgacgagcaa tccctgcaaa
     2821 ggcgatacca gcacgatcat gtaggccacg atcgtgaacg cgagtgacac ttccacgcgt
     2881 gtccagccga actcgcgctc gatcggcgtg atgtacgcgc tgaccgtgag attcgcgatc
     2941 acgctcgggc cgagcgcgag gccgatcgtg gagccgagcg tggtcaggat gccgttgcgc
     3001 gacgtttcgg acggttcgtt acctgtctgc atgtgcgatc cttttccggg cggcgatcgt
     3061 acgtaggcac tttcgaaaac gccgtgaata catccctgta ggctccgtcg gcgacgtcct
     3121 gtcgccgacg gtttcgaaag tggctacgta cgctcgccgc cctagcttgt tgttgtcttc
     3181 gaaagtgcct gcgtacacac gccgcccaga tcctcttgtt atggcagcgc gaatacgaac
     3241 agctggttgc gcaggcccgg ccgcaggtcc ggtgtcaggc tcacgaggcc aagtgccaag
     3301 cccgagccgc cggtgctgac cgcgacatat tgcttgccgt cgaccgcgaa cgtgacggga
     3361 tagccgttca cgggcgcgcc gaggttcact tcccagcgca cgtcccccga gcgctggtcg
     3421 tacgcgcgga aacggccgtt cacgtcgccg ccgaacacga ggccgccgcc cgtcgacatc
     3481 agcgagagct gccccgcgcg ttgctcgcgc ttccagacgg tctcgccggt ttggaccgag
     3541 atcgcctcga tcacgccgac gttgtcggtg ccgggggtga tctgcacgcg gttgcgcagc
     3601 gcgtacgtca cgtcggtatc gacgatctcg ttcgcagaag tcgcagacat gcaggtattg
     3661 ttcaacggat agaacatgac gcccgtgagc gggctgtagg tgccggccgg atagttcttg
     3721 ccgcccgacg tgctcgggca gatcagcttc tcctgcccgg gtgccgtgaa gatcttgtcg
     3781 gggttcacgg tcgcggcgcc ggactcgacg ttgatgtccg agatcacgtt ctgcatcgtg
     3841 gtctcgcgcg cccacaggaa gtcgccggtc tcgcgatcga gcgtgtagac gatgccggtc
     3901 ttgcccggca cgcccgtgat gaccttgcgt cgctcgccgc tacgcacgcg cgggttgatc
     3961 catttcaccg agtcgggatc cggggcgacg accgtgtcga cgagcaggcg ctcgaacggg
     4021 tgatcgaggt cccagtgatc gacgacgtgc tggaagtacc agacgatctc gccggtatcg
     4081 ccatcgagcg ccagagtgga gttgtgatac aggtgctgct cgcggttgcc gccgagcatg
     4141 tacttcggcg ccggggccgt caccgacgtg ccgacgtaga tccggttcag ctcggggtca
     4201 aagctcggca ccatccacat gccgacgtgc caccgtttct cgtacgggat gtcgccccaa
     4261 gtttcgtcac cgggttcacc gggtttcgga atcgtgcgcg tgcgccacag ctcgcggcca
     4321 gtcttcgcgt cgaatgccgt gatcacgcag gcctcgggcc cgccttccgg ctcgcagctc
     4381 ctccccgaga tcaccttgcc gttggcgatg atcgggccgg agctgttctt ggcgccggtg
     4441 cgatagtcga gaatcttcgt ttcccaaacg agctcgcctg tgcgcgcgtt cagcgcatac
     4501 gcgaagccgt cggcgccgtt gtcgaggatc aggttgtcgt agatcgcgag attgcggttg
     4561 gtttcggccg ccgggaaata ctgaccgacg tcctcgggca ccttgcggcg aaactcccag
     4621 atgaaatcgc cggtcacggc attcaacgct tgcgtgacgt cgtttggatt cgggaagtac
     4681 aggatgccgt cgtggaccag cggggtgccc tcctggtagc cgccgtctcc gaggggccgc
     4741 gaccacacga gcttcagttg cgagacgttg cgtgtattga tctgatccag cgggctgtag
     4801 ccccaattgt tcagcgtgcg ccgccacatc ggccaatcct ccggagccgg gttcgcgagc
     4861 atcgcgtcgg tgaccggtgt gagattggcg gttgcttgtg gcggttgagg cgcttgttgc
     4921 gccagagcgg cgaagggcag ggttgcggcg ccgacaaccg caacgagacc ggcagcgcgg
     4981 gtcatttaag taatccccca gtagcaatgg acgcgtgacc gcatcttagc tcaaagccaa
     5041 cgccgaaact tacgcctgcg cggtgcggcg cggcgcaagc gctgcggccg agacgtaggc
     5101 cgtgagcgcg gccgc
//
LOCUS       DATCUD010000451         1624 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_47012, whole genome shotgun sequence.
ACCESSION   DATCUD010000451 DATCUD010000000
VERSION     DATCUD010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47012"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..991)
                     /locus_tag="VIQ99_06690"
     CDS             complement(41..991)
                     /locus_tag="VIQ99_06690"
                     /inference="COORDINATES: protein motif:HMM:NF012422.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEY9182867.1"
                     /translation="MTSAILIVTFIFCLAMAAAGCLVGYQLVNTYNTDLHKRFFYYLV
                     AFYAFAFYGIWGQVLTRALLASFDTEAAVIEIVAGFLPVLGVPFLFVSWIMLVTMGLA
                     IAGRPLRPAWTLLHVTAFVLLLAASWLAVTVLRAPRDFLDANLLVIEAAGMTAVELLY
                     FAVFLLLVLRVPARDARGGKVLRTFSLLLCGSFVARVLLGALVLLDVRLAAPALVAYF
                     GSNLAPLLYLRTKSDEAFKPVKAETANTEGMTHVFDRYGITKRERQIVQKVCLGKTNQ
                     QVADELFISLQTVKDHTHRIYSKLGVKSRMQLVQLMDKAK"
     gene            1193..>1624
                     /locus_tag="VIQ99_06695"
     CDS             1193..>1624
                     /locus_tag="VIQ99_06695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182868.1"
                     /translation="MVFGSGFRTLCAVAALTALVGVATGQDSHSHVPIRVDEGLDWDA
                     LIAATLAAHPSGQALAARAAEAAAWTARGHGWLAAAPSLYFSYLSDSALDDTGQLEYE
                     GGVELPLWRAGQRRAVQAIAESATAASAAAASALRLEVAGLL"
BASE COUNT          290 a          513 c          544 g          277 t
ORIGIN      
        1 tcgcgccggc cgccccgtcg gtggccggcg cgccgccacg tcacttggcc ttgtccatga
       61 gctggacgag ctgcatgcgg ctcttcacgc cgagcttcga atagattcga tgcgtgtgat
      121 ccttgaccgt ttgcaggctg atgaacaact cgtcggccac ttgttgattc gtcttgccga
      181 ggcagacctt ctgcacgatc tggcgctcgc gcttcgtgat gccgtagcgg tcgaacacgt
      241 gagtcatgcc ctcggtgttt gcggtctcgg ccttgaccgg cttgaacgct tcgtcggatt
      301 tggtgcgtag gtacaagagc ggcgcgagat tcgagccgaa gtacgcaacg agtgcgggcg
      361 ccgccaagcg aacgtctagc agcaccaaag cgccgagcaa gacgcgagcg acgaagctgc
      421 cgcagagcag cagcgagaac gtgcgcagca ccttgccgcc ccgcgcatca cgcgctggga
      481 cgcgcagcac gagcagcaga aagacagcga aatacagcaa ctcgaccgcc gtcattccgg
      541 cggcttcgat cacgagcagg ttcgcgtcga ggaaatcccg cggcgcgcgc agcacggtga
      601 ccgcgagcca ggacgcggcg agcagcagca cgaacgccgt gacgtgcagt agggtccacg
      661 ccggccgcaa cggtcttccg gcgatcgcca agcccatggt gaccagcatg atccaggaaa
      721 cgaacaagaa cggcactccg agcacgggca gaaacccggc gacgatttcg atcacggcgg
      781 cttccgtgtc gaacgacgcg agcagcgcgc gggtcaggac ctggccccaa atgccgtaga
      841 acgcaaacgc gtagaacgcg acgaggtagt agaagaaccg cttgtgaagg tccgtgttgt
      901 acgtgttgac cagttgatag ccgaccaggc aaccggcggc agccatcgcc aggcagaaaa
      961 tgaacgtgac gatcaggatc gcgctcgtca tcttggggcg ctatttcatc atggttcatg
     1021 cgctggttcc tccgggcgtt gcgggacgcc acatttcggc gcgtcgttgg gcgcgatttc
     1081 gcgtttgcgc aaacccatac gtacaagcca caggcgcagt gccgtcgcca agcgactccg
     1141 ttcctgcgat tgtggcgctc gtgctgtacg cctcagggag cggcgaagac gcatggtatt
     1201 cgggtccgga tttcgcacac tctgcgcggt cgcggcgttg accgcgctcg ttggtgtggc
     1261 caccggccag gactcccact ctcatgtgcc gatccgggtg gacgaggggc tcgactggga
     1321 cgccctgatc gcggcgacgt tggccgctca cccctcgggg caggcgctcg ccgctcgcgc
     1381 cgcggaagcg gctgcgtgga ctgcccgtgg ccacggttgg ctcgccgctg cgccatcgct
     1441 gtacttctcc tatctgtcgg atagcgctct cgacgatacc ggtcagctcg aatatgaagg
     1501 cggtgtcgag ctgccactgt ggcgcgcggg ccagcggcgt gctgtgcagg cgatcgccga
     1561 gtcggcgaca gcggcgagcg cggccgccgc gagcgcgctg cggctcgaag tggccggttt
     1621 gttg
//
LOCUS       DATCUD010000452         2050 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_39966, whole genome shotgun sequence.
ACCESSION   DATCUD010000452 DATCUD010000000
VERSION     DATCUD010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39966"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..859)
                     /gene="dnaN"
                     /locus_tag="VIQ99_06700"
     CDS             complement(<1..859)
                     /gene="dnaN"
                     /locus_tag="VIQ99_06700"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEY9182869.1"
                     /translation="MKLSAAREVILKPLQTVVGVVERRQTMPILSNVLLSVEGTKLKI
                     TATDLEVEMVADADVKADGGGEITVPGRKLHDIFRALPDGVNVELSLSGERLTVKAGR
                     SRFTLSTLRAADFPTIDEIAAKQTLRVSRADLRRLVEKTHFSMAQQDVRYYLNGLLLE
                     TDKKRLRAVATDGHRLALSEVDLLGAATRDEQLIVPRKGVLELSRLLEGEGEVQVALG
                     ANHIRVQLDGIRLTSKLIDGRFPEYSRVVPAQPKNTIKADRNLFRQALQRTAILSNEK
                     YRGVRLELSA"
     gene            complement(1043..>2050)
                     /gene="dnaA"
                     /locus_tag="VIQ99_06705"
     CDS             complement(1043..>2050)
                     /gene="dnaA"
                     /locus_tag="VIQ99_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006869474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEY9182870.1"
                     /translation="NRAFTFESFVEGKSNQLARAAAFQVAQNPGTAYNPLFIYGGVGL
                     GKTHLMHAIGNEILRRDPAAKIAYVHSERFVSDMVRGLQHNTIAEFKRSYRSLDALLI
                     DDIQFFAGKDRSQEEFFHTFNALLEGQRQIILTCDRYPKEVNGLEERLKSRFGWGLTV
                     AIEQPELETSVAILMSKAAAEGEVLPQEVAFFIAQRIRSNVRELEGALRRVLANSRFT
                     GAPITLEFAKDALRDVLALQDKLVTIENIQKTVAEYFKIRVADLLSKRRSRSIARPRQ
                     IAMALAKELTTHSLPEVGDAFGGRDHTTVLHACRRVKELRDTETRVAEDYNNLLRTLT
                     T"
BASE COUNT          390 a          649 c          557 g          454 t
ORIGIN      
        1 tcgcgctgag ctcgagccgg acaccgcgat acttctcatt cgaaagaatc gccgtacgct
       61 gtagcgcctg gcggaacaga ttacggtcgg ccttgatcgt gttcttcggt tgagcaggca
      121 cgactcgcga atattcgggg aaacggccat caatgagctt cgatgtgagg cgaattccgt
      181 ccaactggac gcgaatgtga ttcgcgccga gcgctacctg gacttcgccc tcgccttcga
      241 gcagccggct cagctcgagc acgcctttgc gcgggacgat gagctgctcg tcgcgcgtcg
      301 ccgcacccag gagatcgacc tccgaaaggg ccaaccggtg cccatccgtc gcaacggctc
      361 gcaggcgctt cttgtctgtc tccaacagca gcccattcag gtaataccga acatcctgtt
      421 gagccataga aaagtgtgtt ttctcgacca atcgacgcaa atcggcgcgt gatacgcgca
      481 atgtttgctt cgcggcaatt tcgtcgatcg tcgggaaatc ggcggctctt agcgtcgaaa
      541 gcgtaaaacg gcttcggccc gctttcacag tcaagcgctc accgctcagc gaaagctcga
      601 cgttcactcc atccggcagc gcacgaaaaa tgtcgtgaag ctttcgaccg ggcaccgtga
      661 tttcaccccc gccgtctgcc ttcacgtctg cgtcggcaac catctccact tcgagatcgg
      721 tcgctgtgat tttcagtttc gtcccttcca cgctcagcaa cacgttgctg aggatcggca
      781 tcgtttgccg tcgctccaca acaccgacca ccgtttgcaa gggtttgaga atcacttccc
      841 gcgctgcgct gagcttcatg actgcctcta tgtcttatct atttactgtc gttgttagtg
      901 accgaaaaac cgcttcacaa cgcggatttt tcctgtttga tcagtttgtt ggccggctac
      961 ctggcggtgc gtaaccatgc tccgggctgt gattcagctg tgcaccgttt cgcggcccgg
     1021 atccgtcccc cggataccca cgctatgtcg tcagtgttct caacaggttg ttatagtcct
     1081 cggcgacccg cgtttcggta tcgcgtaact ctttgacacg acggcacgcg tgcagcactg
     1141 tcgtatgatc ccggcctccg aacgcgtcgc cgacctcggg caagctatgc gtcgtcagct
     1201 ccttggccaa cgccatcgca atctgccgcg gccgagcgat cgagcggctc cggcgcttcg
     1261 acaacaaatc cgcaacccgg attttgaaat actccgcgac cgtcttttga atgttctcga
     1321 tcgtgaccag cttgtcctgc aacgccagca cgtcgcgtag cgcatccttt gcgaactcga
     1381 gcgtgattgg agcgcccgta aaccgcgaat tcgcgagcac gcgccgcagc gcgccttcga
     1441 gctcgcgcac attcgagcga atgcgttgcg cgatgaagaa cgcgacttct tgcggcagca
     1501 cttcaccctc ggcggcggcc ttgctcatca agattgcgac gctcgtttcg agctccggct
     1561 gctcgatggc gaccgtgagc ccccaaccga accgtgactt cagccgctcc tcgaggccgt
     1621 tgacctcttt cgggtaacga tcacaggtca ggatgatctg gcgctggcct tccagtaacg
     1681 cgttgaatgt atgaaagaat tcctcttgcg agcgatcctt gccggcaaaa aactggatgt
     1741 cgtcgatcaa taacgcgtcc agcgaccgat agctacgctt gaactcggcg atcgtgttgt
     1801 gctgcagccc gcgcaccatg tcgctgacga agcgctccga atgcacgtag gcgatcttgg
     1861 ccgcgggatc gcgccgtagg atctcgttgc cgatcgcatg catcaggtgc gtcttgccga
     1921 gaccgacgcc cccgtaaatg aacaacgggt tatacgcagt gccaggattc tgcgcgactt
     1981 gaaacgctgc ggcccgcgcg agctgattgc tcttgccctc gacgaagctc tcgaacgtga
     2041 acgctcgatt
//
LOCUS       DATCUD010000453         1576 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75617, whole genome shotgun sequence.
ACCESSION   DATCUD010000453 DATCUD010000000
VERSION     DATCUD010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75617"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..974)
                     /locus_tag="VIQ99_06710"
     CDS             complement(<1..974)
                     /locus_tag="VIQ99_06710"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018008231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9182871.1"
                     /translation="MTRRKLRSNLEPGSVPWSGRRAQWRALGLTDEDLEKPKIAIVNS
                     SSELSSCFSHLDGLADELKVAIRAAGGVPFEIRTAAPSDFVTSAGKRGAYILPTRDLI
                     AADIEVQVEGALLDGMVCLASCDKTTPGQLMAAGRLNIPTIVVIGGYQRAGVYRGQHT
                     DIEDVFLKTGYLTSGAATIDEIKGMADVAIQSPGVCQGMGTANSMHVVCEALGMTLPG
                     SAPVAAGSAKMHANLRSAGARIVEMVWQDLKPRDIITPGAVRNAVQMVLAVSGSINCV
                     KHLQAIASEADADVDVYQAFADLAERVPLLAAVKPNGAAHIEDFEAAGG"
     gene            1096..>1576
                     /locus_tag="VIQ99_06715"
     CDS             1096..>1576
                     /locus_tag="VIQ99_06715"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY9182872.1"
                     /translation="MPGELRTQPAMNDLKGRTCLVTGATHGIGRATAESLARLGADVL
                     VHGRDSVVVGLVCREIVRASRNPSVTGVVADFASLAAVRRLAAEITERQGRLDVLINN
                     AGTSTRHRRLTNDGFEWQFGVNHLAPFVLTNLLVDKLKANAPARIVTVASMAYRRGTI
                     "
BASE COUNT          246 a          534 c          521 g          275 t
ORIGIN      
        1 ccgcccgcgg cttcgaagtc ctcgatatgc gccgcgccgt tcggcttcac ggccgcgagc
       61 agcggcacgc gctcggccaa atccgcgaac gcctggtaaa cgtccacgtc ggcgtcggct
      121 tcgctcgcga tggcttgcag gtgcttcacg caatttatgg agccgctgac cgcgagcacc
      181 atttgcaccg cgttccgcac ggcgccgggc gtgatgatgt cgcgcggctt caggtcctgc
      241 cacaccatct cgacgatccg cgcaccggcg gagcgcaagt tcgcgtgcat tttcgcgctg
      301 ccggctgcga ccggcgcgct gcccggtaac gtcatgccga gtgcctcgca caccacgtgc
      361 atcgagttcg cggtgcccat gccctggcac acgccggggc tctgaatcgc gacgtcggcc
      421 atgcctttga tctcgtcgat cgtcgcggcg ccggaagtca ggtagcccgt cttcaggaac
      481 acgtcctcga tgtccgtgtg ttggccgcgg tacacgccgg ctctttggta gccgccgatc
      541 acgacgatcg tcggaatgtt caaccggccc gcggccatga gctggcccgg tgtggtcttg
      601 tcgcacgacg cgaggcacac catgccgtcg agcagcgcgc cctcgacctg cacctcgatg
      661 tcggccgcga tcaggtcgcg cgtcggtaat atataggcgc cgcgtttgcc ggcgctcgtg
      721 acgaagtcag agggcgccgc cgtgcggatc tcgaacggca cgccgcccgc ggcgcgaatc
      781 gcgaccttga gctcgtcggc caagccgtcc aagtgactga agcagctcga cagctcgctc
      841 gaagagttca cgatcgcgat cttcggcttc tcaaggtcct cgtccgtgag cccgagcgct
      901 cgccactgcg cgcggcggcc ggaccaagga acggagccgg gctccaggtt gctgcgtagc
      961 ttgcgtcgcg tcatagccac tccgagggcg cattgccgag cacgcattat gccggtggct
     1021 cggtctgccg gtatgggtca acgccgcatt gtgtggtaga aaccgagccg agattcggga
     1081 gattccgatc gcgagatgcc cggcgaactt cgaacccagc cggcgatgaa cgacctcaag
     1141 ggtcggacgt gcctcgtcac gggggccacg cacgggatcg gccgcgccac ggccgagtcg
     1201 ctcgcgcgcc tcggcgccga cgtgctcgtt catgggcgcg actccgtggt cgtaggcctc
     1261 gtgtgccgag agatcgtgcg cgccagccgc aacccgagtg tgacgggcgt agtcgccgat
     1321 ttcgcttcgc tcgccgctgt gcgccgtctc gcggcggaaa tcacggagcg ccaggggcgc
     1381 ctcgacgtgc tcatcaacaa cgccggcacg agcacgcgac accgccgtct cacgaacgat
     1441 gggttcgaat ggcagttcgg cgtgaatcac ttggcaccgt tcgtgttgac gaacctgctc
     1501 gtcgataagc tgaaggcgaa cgcgccggcg cgtatcgtga cggtcgcatc gatggcgtat
     1561 cggcgtggca cgatcg
//
LOCUS       DATCUD010000454         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103774, whole genome shotgun sequence.
ACCESSION   DATCUD010000454 DATCUD010000000
VERSION     DATCUD010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103774"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VIQ99_06720"
     CDS             <1..243
                     /locus_tag="VIQ99_06720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182873.1"
                     /translation="HGTWLNSQAGGTTEKAAGFDVGISAARNVWISVGYNFVGFDDEN
                     FDASRYTAQGPYVRFRVKVDQELFKDLDLGSLTAAK"
     gene            complement(422..1420)
                     /locus_tag="VIQ99_06725"
     CDS             complement(422..1420)
                     /locus_tag="VIQ99_06725"
                     /inference="COORDINATES: protein motif:HMM:NF021512.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2239 family protein"
                     /protein_id="HEY9182874.1"
                     /translation="MTAEFNYVVFAGTRRVAAGQLRDVLPVLKRRFDRNRSDAGLVFE
                     VETGRQVEFDLRGTPAQILDRALPAPQRGRGRPKLGVVSREVSLLPRHWGWLEEQSAG
                     ISGALRRLVEQAMKAQPGKQRARRTREALSRFLYSMAGDRPNYEEAGRALFAGDLARF
                     ERLVRRWPKDIRDHAVAQARLATESADAGTGDPAAVVRDVYERIWTRGDVRAIERLVA
                     PRYTIHSDPGDAWAGRTLDRKTYEERVRYSRDAFPDLAFTVHDVIVAGSRVAARWSAA
                     GTHTGNLRDLPATGKRLQFEGQTIYEVTGGRIAGHWQVVDRLGFLQQLRPATGTAR"
BASE COUNT          259 a          505 c          487 g          253 t
ORIGIN      
        1 cacggtacgt ggctcaactc gcaggccggc ggcacgaccg agaaggcggc cggcttcgac
       61 gtcggcatct cggccgcgcg caacgtgtgg atctcggtcg gctacaactt cgtcggcttc
      121 gacgacgaga acttcgacgc gagccgctac acggcgcaag gtccgtacgt ccgcttccgg
      181 gtcaaggtcg atcaggagct gttcaaggac ctcgacttag gatcgctcac ggccgccaag
      241 tgacgcgtcg cgctagcagc cgaccaccag ccggcgtgcc ggcatagaga cgcgccgcga
      301 tctcctgatc cgcgggcgac aacgtgcccg gcccagctcc gttatccggc gggagctcac
      361 acgaggaatg gagagagctc aggggtatag ataactcccg cggaaagtag tcccttcgcg
      421 ttcaacgtgc cgtgccggtg gctggtctga gctgctgcag gaagccgagg cggtcgacga
      481 cttgccaatg cccggcgatg cgaccgcctg tgacttcgta gatcgtctgg ccttcgaact
      541 gcaggcgctt gccggtagcc ggcaggtccc gcaggttccc ggtatgcgtt ccagcagcgc
      601 tccagcgcgc ggccacccgg cttccagcca cgatcacgtc gtgaacggtg aacgcgagat
      661 ccggaaacgc gtctcgtgag tagcgcacgc gttcctcata cgtctttcgg tcgagcgttc
      721 ttccggccca cgcatcgccg gggtccgaat ggatcgtgta gcgcggtgcg acgagccgct
      781 cgatcgctcg aacatcgccg cgagtccaga tacgctcata cacgtccctg acaacagcgg
      841 ccggatcgcc cgtcccggcg tccgcacttt ccgtggcgag ccgagcctgg gcaacggcgt
      901 gatcgcggat gtccttcggc cagcggcgca cgagccgctc gaaacgagca aggtcaccgg
      961 cgaataacgc gcgcccggct tcctcgtaat tcgggcgatc gccggccatg ctgtaaagaa
     1021 agcggctcag tgcctcgcgt gtgcgccgcg cgcgttgctt gcccggctgc gctttcatcg
     1081 cctgctcgac gagccggcgc aacgcgcccg agattcctgc gctctgctcc tcgagccagc
     1141 cccagtggcg gggcagcagg gagacttccc ggctcacgac accgagcttg ggccgtccgc
     1201 ggccgcgttg cggcgccggc agcgcgcggt cgaggatttg ggcaggcgtg ccgcgcaaat
     1261 cgaattcgac ttgccggccc gtctcgacct cgaacacgag ccctgcgtcc gagcggttac
     1321 ggtcgaaacg ccgcttcagc acgggaagga cgtcgcgcag ctgccctgcg gccacgcggc
     1381 gtgtgccggc gaagacgacg tagttgaact ctgcggtcat ctatttttca cccgggtgaa
     1441 aatgatcctg taatttaccc gggtacaaat aaaattgcca gcggccagct ctgccagaac
     1501 gagg
//
LOCUS       DATCUD010000455         1698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97002, whole genome shotgun sequence.
ACCESSION   DATCUD010000455 DATCUD010000000
VERSION     DATCUD010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97002"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(53..1120)
                     /locus_tag="VIQ99_06730"
     CDS             complement(53..1120)
                     /locus_tag="VIQ99_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015347142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEY9182875.1"
                     /translation="MRGQSSNQSSMLCLISPETSVPTEHPIRSIKQLADAALRTLSEV
                     FDEMYAATGRPSVPPERLLKGQLRIALYSIRSERQLCEQLQYKLRFRWFLDMDMLEAA
                     FDASTYSRNRDRLMSHEVAAAFFAAVREQASELMSHAHFSVDGTLIEAWASRKRFRRK
                     DDDEGDNNGWGTFRGEKRSNETHASKTDPESRLMRKGNGQPAKLSYMGHALVENRHGL
                     LVDLQVSTATGKAEREVAIEMLAAHERPQRTTLGADRGYDTSDFVASCRELGVTPHVA
                     QNTTNRSSAIDERTTRHVGYSISQRLRMRIEQVFGWGKTIGGLRRTRLRGLARTRFGT
                     YLIGAAYNLLRVSNLRREVAA"
     gene            complement(1133..1273)
                     /locus_tag="VIQ99_06735"
     CDS             complement(1133..1273)
                     /locus_tag="VIQ99_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182876.1"
                     /translation="MDLIHEVEKVEGAVVDVELGVVEGHAGEIDDADTKVRRPIDRDR
                     AV"
     gene            1259..1543
                     /locus_tag="VIQ99_06740"
     CDS             1259..1543
                     /locus_tag="VIQ99_06740"
                     /inference="COORDINATES: protein motif:HMM:NF017451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four helix bundle protein"
                     /protein_id="HEY9182877.1"
                     /translation="MDQVHEVMPPGRAHLTDQLDRAATSVVLNTAEGAGEFSKDEKQR
                     FYRIARRSATETAAILDILDRRNAVPTATIAPAREMLVRVVSMLARLASA"
BASE COUNT          257 a          611 c          551 g          279 t
ORIGIN      
        1 cccgatctcc tgctgggcgc cgcgcccgcg tcgcgggcgc cggtgccggt ggtcaggctg
       61 cgacctcgcg acggaggttg ctgactcgga gcaggttgta ggcggcgcca atcagatacg
      121 tgccaaaccg cgtgcgcgcg agcccgcgaa gtcgggttcg tcggaggccg ccgatggtct
      181 taccccaacc gaacacctgt tcgatccgca tccgcagccg ctgactgatc gagtagccga
      241 cgtgtcgcgt ggtccgctca tcgatcgccg acgagcgatt cgtcgtgttc tgcgcgacgt
      301 ggggcgtgac accgagttcg cgacaggacg cgacgaagtc gctggtgtcg tacccgcgat
      361 ccgcgccgag cgtcgtccgc tgcggccgtt cgtgcgcggc gagcatctcg atcgcgacct
      421 cgcgttcggc cttgccggtg gcggtgctca cctgcagatc gacgagcagc ccgtggcggt
      481 tctcgaccaa cgcgtggccc atgtacgaga gcttcgccgg ttgtccgttg cccttacgca
      541 tgagccgcga ctccgggtcg gtcttggacg catgggtttc gttgctgcgc ttctcgccgc
      601 ggaacgtgcc ccagccgttg ttgtcgccct cgtcatcgtc cttgcgccgg aagcgcttgc
      661 gcgaggccca cgcctcgatc agcgtcccgt cgacgctgaa gtgcgcgtgg ctcatcagct
      721 cgctcgcctg ctcgcgaacg gccgcgaaga acgcggcggc cacctcgtga ctcatcagtc
      781 ggtcgcgatt gcgcgaatac gtgctggcat cgaacgcggc ctcgagcatg tccatgtcga
      841 gaaaccagcg gaaccgcagc ttgtactgga gctgctcaca cagctgccgc tcgctgcgga
      901 tcgagtacag cgcgatccgc agctggccct tgagcagccg ctccggcggc accgacgggc
      961 gcccggttgc ggcgtacatc tcgtcgaaga cctccgacag cgtgcgcagg gccgcgtccg
     1021 cgagctgttt gatcgaccgg atcggatgtt ccgtcggcac gctcgtctcg ggggagatca
     1081 ggcagagcat cgacgactgg ttcgaggact ggccgcgcat gtcctcgata gatcacaccg
     1141 cccgatcacg gtcgatcggc cgacgcacct tcgtgtcggc gtcgtcgatc tctccggcgt
     1201 gaccctcgac cacaccaagc tcgacgtcga ccaccgcgcc ctcgaccttc tcgacctcgt
     1261 ggatcaggtc cacgaggtca tgccgccggg gcgcgcacac ctcacggatc agctcgaccg
     1321 agccgccacc tcggtcgtcc tcaacaccgc cgaaggcgcc ggcgagttca gcaaggacga
     1381 gaagcagcgc ttctaccgga tcgcacgtcg gtcagcgacc gagaccgcgg cgatcctcga
     1441 catcctcgac cgtcggaacg ccgtcccgac cgcaaccatc gccccggcgc gcgaaatgct
     1501 cgtccgcgtc gtctcgatgc tcgcccgcct cgccagcgcg tgaccccaga tcgggcacgg
     1561 gcacgggcac gggcacgggc acgggagcag gttgacttcg aaacgcctgc ggcgtttctc
     1621 agcaacctgc tagcagagcc cggcggctcg acgcggccgc gccgcgaccg ccgcgaccgc
     1681 cggatccggc gcctacac
//
LOCUS       DATCUD010000456         1773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_68607, whole genome shotgun sequence.
ACCESSION   DATCUD010000456 DATCUD010000000
VERSION     DATCUD010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68607"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..600)
                     /locus_tag="VIQ99_06745"
     CDS             complement(<1..600)
                     /locus_tag="VIQ99_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182878.1"
                     /translation="MKGRSAELRTLEGMIATTRPTRIALVGPGGSGKSMLAAALGHRL
                     RRSFGGRIDWFRSGAWGFHTLSEMLALRFGTGLGEGRVERLRRFLAVGPQRLIVLDNH
                     EDDNAMERLFEAFAESNATFVITARRCLLSGVLIFPVVAPLVTSGRSAFPRVASLTRL
                     LRWNPLALDIADSIVASGTVSAEGLGDFLRAAGVARVHAL"
     gene            complement(720..1517)
                     /locus_tag="VIQ99_06750"
     CDS             complement(720..1517)
                     /locus_tag="VIQ99_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007876122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family DNA-binding domain-containing
                     protein"
                     /protein_id="HEY9182879.1"
                     /translation="MTNKTHRALVAEDEPMLARALVGILGDVWPEAVVEVVHDGIAAA
                     ERALEVEPDVLFLDIQMPGRTGLEVAEMVTDEWPPDRALPLLVFVTAYDEFAIKAFER
                     AAVDYVLKPATRERLADTAARLRDRLAKRAAVPAPGEAATLCGQVQSILAPTVESERI
                     RIIRASTGNTVRMIPAAEVICLEAADKYVTVVTANGEALVRMSLRELATRLEGVDLVQ
                     IHRGVMVNAACMTTATRDELGHFSLRLRGLAREVKVSRAFAHLFRPM"
     gene            complement(1514..>1773)
                     /locus_tag="VIQ99_06755"
     CDS             complement(1514..>1773)
                     /locus_tag="VIQ99_06755"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182880.1"
                     /translation="NAIKHGIEPKVGSSTLEVKAAREHDAVIVTVADTGRGLPADADA
                     RGGYGVEHVRDRLRAYYGPAATLTLTHNEPEGTRATVRLVR"
BASE COUNT          302 a          621 c          571 g          279 t
ORIGIN      
        1 gagtgcgtgc acgcgtgcca cacccgcggc gcgcaagaag tcgccgagcc cctccgcgct
       61 caccgtaccc gacgccacga tgctgtcggc gatgtcgagc gccagcgggt tccagcgcaa
      121 caagcgcgtg agcgatgcaa cccgcgggaa cgcgctgcgg cccgacgtca cgagcggcgc
      181 gaccacggga aagatcaaaa cgcccgagag caggcagcga cgtgcagtga tcacgaacgt
      241 cgcatttgat tcggcgaacg cctcgaatag gcgctccatc gcgttatcgt cctcgtggtt
      301 gtcgagcacg atcagccgtt gtgggccgac cgcgaggaat cgccggagtc gctcgacgcg
      361 gccttcgccc aggcccgtgc cgaagcgcaa cgccagcatc tcgctcaacg tatgaaagcc
      421 ccacgcgccc gagcggaacc agtcgatgcg gccgccgaat gaacgtcgca gccggtgccc
      481 gagcgccgcg gccagcatcg acttgccgct gccgccgggg ccgaccagcg cgatgcgcgt
      541 ggggcgcgtg gtcgcgatca tgccctcgag cgtgcgcagc tcggcgctgc gtcccttcat
      601 tccttgcggt cgcggcggaa aaatcgaacg gcgagaattc acgagtgata gcttagcagt
      661 gccaatgcgt tggccggctc ccgcggacca cgtgccgcag tagagcgacg cagcgcactc
      721 tacatcggcc ggaacaagtg agcgaacgct cggctcactt tgacttcgcg cgcgagaccg
      781 cgcagtcgca atgagaaatg accgagctcg tcacgcgtgg ccgtcgtcat gcacgcggca
      841 ttcaccatga ctccgcggtg tatctgaacg agatcgacgc cctccaagcg agttgcgagc
      901 tcgcgcaggc tcatgcgcac gagcgcttcg ccgttcgccg tgacgaccgt gacgtacttg
      961 tcggcggcct cgaggcagat cacctccgcg gcgggaatca tgcggacggt gtttcccgtg
     1021 ctcgcacgga tgatgcggat gcgctcggac tcgaccgtag gcgccagaat cgattgaact
     1081 tgcccgcaca gagtcgccgc ctcgccgggc gccggcacgg ccgcgcgctt cgcgagccga
     1141 tcgcgcaaac gcgctgcggt gtctgcgagg cgctcccgcg tcgcgggctt caacacgtag
     1201 tcgaccgcgg cgcgctcgaa cgccttgatc gcgaactcgt cgtacgccgt gacgaacacc
     1261 aagagcggca gcgcgcgatc gggcggccat tcgtcggtga ccatctcggc gacctcgagc
     1321 cccgtgcggc ccggcatctg gatgtcgagg aacaggacgt cgggctcgac ctcgagtgcc
     1381 cgctcggctg cggcaatgcc gtcgtgcacg acttcgacga ccgcctccgg ccacacgtcg
     1441 cctaggatgc caacgagagc tcgggccaac atcggctcgt cttccgcgac cagcgcacga
     1501 tgcgtcttgt tcgtcatcgc accaatctca cggtcgctcg cgtgccttcg ggctcgttgt
     1561 gcgtcaacgt caacgtcgca gccggcccgt agtaggcacg caggcgatca cgcacatgct
     1621 cgacgccgta cccaccgcgc gcatccgcgt cggccggcaa gccgcgcccc gtgtccgcga
     1681 cagtgacgat cacggcatcg tgttcccggg ctgctttgac ttcgagcgtc gagcttccga
     1741 ccttcggctc aatgccgtgc ttgatggcgt tct
//
LOCUS       DATCUD010000457         4703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18798, whole genome shotgun sequence.
ACCESSION   DATCUD010000457 DATCUD010000000
VERSION     DATCUD010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4703
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18798"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1194)
                     /locus_tag="VIQ99_06760"
     CDS             complement(<1..1194)
                     /locus_tag="VIQ99_06760"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9182881.1"
                     /translation="MLMHSRRVMRALSAASALLALGACSEAPPPAADREPVPGAGITV
                     FTGSRLIVGDGTVIDNATFTVGADNRFGLVGATGAVTVPAGAATVDLVGLTVMPAIVD
                     THVHLSRERDALTTDLKRRAYFGVGAAMSLGQDDGDAIRAMRREAIPGAALYRTAGRG
                     FTAPEPGRSEVPYWVTTADEARAGVREQAALGVDIIKVWVDDRMGQYPKLSPEIYGAV
                     IDEAHRNGLRATAHEYYLADAKGLVRAGIDAFAHGVREEIDDELVAMLKERPEFVLVP
                     NLPDRGVVQDMSWLSAHLPADQVAQLQAASADRPEAQAFFGIQARNLARLSREGVKIA
                     LGTDGNIPWNAHLEMADMVATGMTPAEVIVASTSNAAEFMRLADAGTVASGKSADFIV
                     LEANPL"
     gene            1504..3648
                     /locus_tag="VIQ99_06765"
     CDS             1504..3648
                     /locus_tag="VIQ99_06765"
                     /inference="COORDINATES: protein motif:HMM:NF018190.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate binding family 9 domain-containing
                     protein"
                     /protein_id="HEY9182882.1"
                     /translation="MTVAATLVLTPVTAQVAGEEPPEKSVRIQRAAEPPVIDGVLNEE
                     VWQRAPVIDDLHQVSPVEFAEPSERTEVYVLYDRNALYIGVHMFDSEPQLINARILRQ
                     GQAIGADDRFFVHIDPFNTRRGGYLFGVNPNGVRFDGIFEGITQRQFDWDGIWQAAAR
                     ITEDGWMLEMEIPFKTLSFDPMQTTWRMNFARNIERKNEGIAWNSRNRNTDLSTMGAV
                     TGISQIEQGLGLDVVPSMSVHEQRLIGNVPAQSDAEPSLDVFYKITPQLNGALTINTD
                     FSATEVDDRQVNLTRFSLFFPERRDFFLQDADIFQFGRLQQDGRPYFSRKIGISATGV
                     PVPIDVGGRVSGRIGRFDIGTLAVRQEAFRDVEAETAFVGRVAANVLAESSVGMIVTD
                     GDPATNIDNGVVGVDFRYFNSRLMEGRGVQGDAWIQRSDTPGLDGDDAAVGVRASVPS
                     NTGFRGELGFTRIEPNFNPALGFVRRRGVDNSYGDLGHTWRPRDGVIRTIFSGVFADR
                     IEYLDDGSIQSQNLNLQAANVELDSQDQVSLAFSNQKEGLREPFMISPGVVIPPGLYS
                     FDTTNVSIRSGDQRALGGGFFINDGEFYDGTRFGAAVFFGFRSQHFRTNLNYQYNDIV
                     LPGGAFETRVVRLSLEAIFSAKLSWVNLIQYDNVSRTVGLNSRLHWIPKAGREGFLVL
                     NHNLRDDILTPESDFHTSFADVTLKYSYTFRF"
     gene            3689..4612
                     /locus_tag="VIQ99_06770"
     CDS             3689..4612
                     /locus_tag="VIQ99_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182883.1"
                     /translation="MKTPKALAAHTSLIAAWLLLPCALQAQPDNAAAYALANQVADEL
                     EIVRERMGRPYDDSPRLPVSAVSELELYFQTQSLLRKANQLAQELAGAAPRSPGPVPS
                     GEVGAQDVYALLEDALAQIRVAAEAIGITERATFEQRVTSIAPTGVFLVVIDINRQLN
                     LMLRVPISDAEVFDEISSAITYAAALLASYPGVTTVPEAPPFDGHKRPADVYLKLMEC
                     MDVVMRVAPKVGVQALGLSARRNVPEDTSPGHAYDIARFLVADLAAIAGARNVPHARV
                     SMPAPKHVFSTEVYAHAGILLRQLEELERRL"
BASE COUNT          811 a         1592 c         1543 g          757 t
ORIGIN      
        1 gagcgggttc gcctcgagca cgatgaagtc ggcgctcttg ccggacgcta cggtgccggc
       61 gtcagcgagc ctcatgaact ccgccgcatt gctcgtcgag gccacgatga cctcggccgg
      121 cgtcattccg gtcgccacca tgtcggccat ctcgaggtgc gcgttccacg gtatgttacc
      181 gtcggtcccg agcgcgatct tgacgccctc gcgggacaac cgcgcgaggt tgcgtgcctg
      241 aattccgaag aacgcctggg cctcgggacg atcggcagac gcggcctgaa gctgcgcgac
      301 ctggtccgcc ggcaggtgcg ccgagagcca actcatgtcc tgcacgacgc cgcgatccgg
      361 caggttgggc accagcacga attcgggtcg ctctttcagc atcgcgacga gctcgtcgtc
      421 gatctcttcg cgaacgccgt gcgcgaacgc gtcgatgccg gcgcgcacga gccccttcgc
      481 gtcggcgaga tagtactcgt gcgccgtcgc tcgcaacccg ttgcggtgcg cctcgtcgat
      541 gaccgcgcca tagatctcgg gcgacagctt cggatactgg cccatgcgat cgtcgaccca
      601 aaccttgatg atgtcgacgc cgagcgcagc ttgctcgcgc acgccggcgc gggcctcgtc
      661 cgcggtggtg acccagtacg gcacctcgct gcgaccaggc tcgggcgcgg tgaagcctcg
      721 gcccgccgtg cgatacagcg cggcgccggg gatcgcttcg cggcgcatcg cgcggatcgc
      781 gtccccgtcg tcttggccca agctcatggc ggcgccgacg ccgaaatacg cgcgccgctt
      841 cagatcggtc gtcaacgcgt cgcgctcgcg cgacagatgc acgtgcgtgt cgacgatcgc
      901 gggcatgacg gtgagcccca cgagatcgac ggtggcggcg cccgcaggca cggtgactgc
      961 gcccgtcgcg ccgacgaggc cgaagcggtt gtcggcgccg accgtgaacg ttgcgttgtc
     1021 gatcacggtg ccgtcgccga cgatcagtcg cgagcccgtg aacaccgtga tgccggcgcc
     1081 gggtaccggt tcccgatcgg ctgccggcgg cggcgcctcg gagcacgcgc cgagcgcgag
     1141 cagtgccgac gcggccgaga gcgctcgcat gacgcgccga gagtgcatga gcatgatcgt
     1201 tccccccaac gaatcgccgt cgccgatctt aggccgatcg ccgtgcggcc gccattggcc
     1261 agccccacgc ggcggcgatt acactgcaaa cggcagcgtg cagcggcaca cgctaccgtc
     1321 gagaatgact ctagaaccgg cttaagtttt ctcgccgatc agaaagaatt ctgagtagct
     1381 ccggtgaacg gtcgaaagat ccgcataatg acgccccacg aaaaccgacg cgtccgcccc
     1441 ccagtgcgcc cgaacccact ccgcctcccg cacgcgcttc gtggccagct cggccggtgc
     1501 gcagtgaccg tcgccgcgac gctcgtgctg actccggtga cggcgcaagt cgcgggcgag
     1561 gagccacccg aaaagtcggt gcgaatccag cgtgcggcag agccgcccgt gatcgacggc
     1621 gtgctgaacg aggaggtgtg gcagcgcgcg cccgtgatcg acgacctgca ccaggtctcg
     1681 ccggtcgagt tcgcggagcc gagcgagcgc accgaggtct acgtcctcta cgatcgcaac
     1741 gcgctctaca tcggcgtcca catgttcgac agcgagccgc agctgatcaa cgcgcggatc
     1801 ttgcgtcagg gccaagccat cggcgccgac gaccgattct tcgtgcacat cgacccgttc
     1861 aacacgcgcc gcggcggcta cctgttcggt gtgaatccga acggcgtgcg tttcgacggc
     1921 atcttcgaag gcatcactca gcggcagttc gactgggacg gcatttggca agccgccgcg
     1981 cggatcaccg aagacggctg gatgctggag atggagatcc cgttcaagac gttgtcgttc
     2041 gatccgatgc agacgacgtg gcgcatgaat ttcgcgcgca acatcgagcg caagaacgag
     2101 ggcatcgcgt ggaactcgcg gaaccgcaac accgatctct ccacgatggg cgcagtcacc
     2161 ggcatctcgc agatcgagca gggcttgggg ttggacgtcg tgccgtcgat gagcgtgcac
     2221 gagcaacggc tgatcggcaa tgtgcctgca cagtccgacg cggaaccgtc gctcgacgtg
     2281 ttctacaaga tcacgccgca gctgaacggc gcgctcacga tcaataccga tttctcggcg
     2341 accgaggtcg acgaccgtca ggtcaacctc acgcgcttca gcctgttctt cccggagcgg
     2401 cgcgatttct tcctgcagga cgccgacatc tttcaattcg gccgcctcca gcaggacggg
     2461 cgaccgtact tctcgcgcaa gatcggcatc agtgcgaccg gcgtgccggt gccgatcgac
     2521 gtcggcggca gagtcagcgg ccgcatcggc cggttcgata tcggcacgct cgcggttcgc
     2581 caagaggcgt tccgggacgt cgaagccgag acggcgttcg tgggccgggt cgccgcgaac
     2641 gtgctcgcgg aatccagcgt cggcatgatc gtcacggacg gagacccggc gacgaacatc
     2701 gacaacggcg tggtcggcgt cgacttccgc tatttcaaca gccggctcat ggagggccgc
     2761 ggcgttcaag gcgacgcgtg gattcagcgg tccgacacac ccgggctcga cggtgacgat
     2821 gcggcagtgg gcgtccgggc aagcgtgccg agcaacaccg ggttccgcgg cgagctcggc
     2881 ttcacgcgga tcgagccaaa cttcaatccc gcgctcggct tcgtgcgccg caggggcgtc
     2941 gacaacagct acggcgatct cgggcacact tggcggccgc gcgacggggt gatccgcacg
     3001 atcttttcgg gcgtgttcgc cgaccgcatc gagtatctcg acgacggctc gatacagagc
     3061 cagaacctga accttcaggc ggcgaacgtc gagctcgact cgcaagacca ggtcagcctc
     3121 gcattctcga accaaaagga gggactccgc gagccgttca tgatctcgcc aggtgtcgta
     3181 atcccgcccg gcctgtactc gttcgatacg accaacgtat cgatcaggag cggcgaccag
     3241 cgcgcgctcg gcggcggctt cttcatcaac gacggcgagt tctacgacgg cacgaggttc
     3301 ggcgccgcgg tgttcttcgg ttttcgcagc cagcatttca ggacgaacct gaactatcag
     3361 tacaacgaca tcgtgctgcc gggtggcgcg ttcgagacgc gcgtcgtgcg cctctcgctc
     3421 gaagcgatct tctcggcgaa gctgtcctgg gtcaacctga tccaatacga caacgtcagc
     3481 agaaccgtgg ggctgaacag tcgtttacac tggattccaa aagccggacg cgaaggcttc
     3541 ctcgtgctga accacaacct gcgagacgac atcctgacgc cggagagcga cttccacacc
     3601 tcgtttgccg acgtgacgtt gaagtacagc tacacgttcc gcttctgatt ctgacggggc
     3661 gcgatgccgc cccaggggag acccgccaat gaagacgcca aaagccctcg ccgcacacac
     3721 ctcgctgatc gccgcgtggt tgctgctgcc ctgcgcgttg caggcccaac ccgacaatgc
     3781 ggccgcctat gcgctcgcga accaagtcgc cgacgagctc gagatcgtgc gcgagcggat
     3841 gggccggccg tacgacgata gcccgcgcct gcccgtgtcc gccgtatcgg agctcgagct
     3901 gtacttccaa acgcagtcgc tgcttcgcaa ggcgaatcaa ctggcacagg agctggccgg
     3961 agcggcgccg cggtcaccgg gccccgtgcc gtcgggcgaa gtcggcgcgc aggacgtgta
     4021 cgcgctgctc gaggatgcgt tggcgcagat tcgtgtcgcg gccgaagcca tcggcatcac
     4081 ggaacgcgcg acgttcgagc agcgcgtgac gagcatcgca ccgaccggcg tgttcctcgt
     4141 cgtgatcgac atcaatcgcc agctgaatct gatgctgcgc gtgccgatca gcgacgccga
     4201 ggtgttcgac gagatctcgt ccgcgatcac gtatgcggcc gcgctgctcg cgtcctaccc
     4261 cggcgtgacg acggtgcccg aggcgccgcc gttcgacggc cacaaacgcc ccgctgacgt
     4321 ctatctcaag ctcatggagt gcatggacgt cgtcatgcgc gtggcgccga aggtcggcgt
     4381 ccaggccttg ggcttgagcg cgcgacggaa cgtgcccgag gacacgtcgc cgggccacgc
     4441 ctacgacatc gcgcgattcc tcgtggcgga ccttgcggca atcgcgggcg cgcgcaacgt
     4501 gccgcacgcg cgcgtctcga tgccggcgcc gaagcacgtg ttctccacgg aggtctacgc
     4561 gcacgcgggg atcctgctgc gtcagctcga ggagctcgag cggcgcctgt agcgcggcgt
     4621 caggggcgcg tggagctcac gcgcggccgc gagccgacct gctcgtaacg gaagccgtcg
     4681 gccggccgat cgagccgccg cac
//
LOCUS       DATCUD010000458         1910 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82661, whole genome shotgun sequence.
ACCESSION   DATCUD010000458 DATCUD010000000
VERSION     DATCUD010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82661"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..292)
                     /locus_tag="VIQ99_06775"
     CDS             complement(<1..292)
                     /locus_tag="VIQ99_06775"
                     /inference="COORDINATES: protein motif:HMM:NF018095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEY9182884.1"
                     /translation="MIDDPFIELHTGPGRGYPVFFVAERGEQIALLKRRTEWFKVRVA
                     RGEEGWVHYEQLTTTLNLDGEPFDLPAVGFADYAARRWEVGALYGDFGGANII"
     gene            complement(380..>1910)
                     /locus_tag="VIQ99_06780"
     CDS             complement(380..>1910)
                     /locus_tag="VIQ99_06780"
                     /inference="COORDINATES: protein motif:HMM:NF037276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182885.1"
                     /translation="WAICRLEEPDPANPTDPNAVVYVPCTPERLAVTNPVPVAAPPLY
                     GVWMYDPATRTQQPIVIGEEGVLIADVAAAQPRRNPTNIPDKMPGIDFDADLAAEGAG
                     ILNIRSVYDIDGVASVNIAATADSVITPASNRPARFLRVEKAVAIPDEDIVDLQNTAF
                     GPNIQQGMREIVAYAPIEPDGSVRVKVPANVALAVSVLDANGRRLSARHQNWLQVVPG
                     QELTCNGCHAPASNLSHGRSNAFNAVYAGAAANGVPFPNTVGTFSPDAGETMAETRTR
                     VSCQTDCAALEPSLDIVYTDVWTDPAATTPSPSFSYLYTNLITTPPASVNCIANWTPA
                     CRVVIHYEMHIHPLWSESRQVLDPMTNAVIADNTCAQSGCHAPVNAMNAPMVPAGQLD
                     LTDGPSADEPDQFNAYRELLFPDNRQILNGGALVDEQVQIGVDAMGNPILAPVSIAPS
                     MSAAGARISRFFSCFDAGGTGCPSQSHVGFLSPDELKLIAEWLDIGAQYYNDPFAVPV
                     M"
BASE COUNT          334 a          635 c          619 g          322 t
ORIGIN      
        1 agatgatgtt ggcgccgccg aaatctccgt atagcgcacc gacctcccag cgccgcgcgg
       61 catagtcggc aaagcccact gccggcaaat cgaacggctc gccgtcgaga ttcagtgtcg
      121 tggtgagctg ctcgtagtgc acccaccctt cttcgcctcg agcgactcgg accttgaacc
      181 actccgtcct gcgcttcaag agcgcgattt gctcaccacg ctccgcgacg aaaaacacgg
      241 gatacccacg accgggcccc gtatggagct cgatgaacgg gtcgtcgatc acgacttccc
      301 ggggtggccg ttctgcgcct gccgcatccg aagcgactac gagttggcat aacgacagaa
      361 cgatcagcac ccaccgcatc tacatcaccg gtaccgcgaa cgggtcgttg tagtactgcg
      421 cgccgatgtc gagccattcc gcgatcagct tgagctcgtc cggcgacagg aaacccacgt
      481 gcgactggga cggacacccc gtgccaccgg cgtcgaagca cgagaagaac cgtgaaatgc
      541 gcgcgcccgc ggcgctcatc gacggcgcga tcgatacggg cgccagaatc gggttgccca
      601 tcgcatcgac accgatctgc acctgctcgt ccacgagcgc gccgccgttc agaatctggc
      661 ggttgtccgg gaacaagagc tcgcgatacg cgttgaactg gtccggctcg tcggccgagg
      721 ggccgtccgt gaggtcgagc tggcccgccg gcaccatcgg cgcattcatc gcgttcacgg
      781 gcgcgtggca acccgactgc gcgcacgtgt tgtcggcgat cacggcattc gtcatcggat
      841 cgagaacttg gcgcgactcg ctccacaacg ggtgaatgtg catctcgtag tggatgacca
      901 cgcgacaagc cggcgtccaa ttcgcgatgc aattgaccga ggccggcggt gtcgtgatca
      961 agttcgtgta gagatacgag aacgacgggc tcggcgtcgt cgcagcggga tccgtccata
     1021 cgtccgtgta gacgatatcg aggctcggct cgagcgcggc acaatccgtc tggcagctca
     1081 cgcgcgtccg cgtctcggcc atcgtctcgc cggcatcggg cgagaacgtg ccgaccgtgt
     1141 tcgggaacgg cacgccgttg gcagccgcgc ccgcgtacac cgcattgaac gcgttgctgc
     1201 ggccgtgcga gagattgctg gccggcgcgt gacagccgtt gcatgtgagc tcctgccccg
     1261 gcacgacctg caaccaattc tggtgtcgcg ccgaaaggcg ccgcccgttc gcgtcgagaa
     1321 cgctgaccgc aagcgcgacg ttcgcgggga ccttcacgcg cacggagccg tcgggctcga
     1381 tcggcgcgta ggcgacgatc tcgcgcatgc cctgctggat gttgggaccg aacgcggtgt
     1441 tctggagatc gacgatgtcc tcgtcgggga tcgcgacagc cttctcgacg cgcaggaaac
     1501 gcgccggacg gttcgacgcg ggcgtgatca cggaatcggc cgtggccgcg atgttcacgc
     1561 tcgcgacgcc gtcgatgtcg tagacgctgc ggatgttcaa gattccggcg ccctccgctg
     1621 cgagatccgc atcgaaatcg atgccgggca tcttgtccgg gatgttggtc gggttgcggc
     1681 gcggctgcgc ggcagcaaca tccgcgatca gcacgccctc ttcgccgatc acgatcggct
     1741 gctgagtccg cgtcgcgggg tcgtacatcc agacgccgta cagaggcggc gccgccaccg
     1801 gcaccggatt cgtgaccgcg agacgctccg gcgtgcacgg cacgtagact acggcattcg
     1861 gatccgtcgg attcgcggga tccggctcct cgaggcggca gatcgcccac
//
LOCUS       DATCUD010000459         1997 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_89826, whole genome shotgun sequence.
ACCESSION   DATCUD010000459 DATCUD010000000
VERSION     DATCUD010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1997)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1997)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1997
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89826"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..405)
                     /locus_tag="VIQ99_06785"
     CDS             complement(<1..405)
                     /locus_tag="VIQ99_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY9182886.1"
                     /translation="MLTRRIIPCLDVRDGVVVKGVRFRDHKVVGDIMTLAARYRDEGA
                     DELVFYDITASPDQRTVDRTWVNRIAAVLDIPFCVAGGIRSVADAEAVLNLGADKISV
                     NSPALERPGLIDELVLRFGSQCVVIGIDTLTRD"
     gene            complement(387..1118)
                     /gene="hisA"
                     /locus_tag="VIQ99_06790"
     CDS             complement(387..1118)
                     /gene="hisA"
                     /locus_tag="VIQ99_06790"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017913326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEY9182887.1"
                     /translation="MIIPAIDLRGGRCVRLFKGDYDQETRYPVDPVELAAHYRDLGAQ
                     WLHVVDLDGAKRGEPVNLELIRRMHATGIAVQLGGGIRSRSNLERALPVASRVVIGSL
                     AVSDPDLVTAWLRELGPERFTLALDVRLTADGTPMIATHGWTRASTLTLADAIDGYAA
                     VGLRHVLCTDIDRDGALSGPNMALYRDCVGRWPDIAFQASGGVRHLADLEALAAVGVA
                     ATVSGKALLEGKLKPEEIGPFLRGA"
     gene            complement(1135..1737)
                     /gene="hisH"
                     /locus_tag="VIQ99_06795"
     CDS             complement(1135..1737)
                     /gene="hisH"
                     /locus_tag="VIQ99_06795"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018080907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEY9182888.1"
                     /translation="MKARAVIIPSCGSNLASLKFALERIGADVPLTEDPDRIRAASHV
                     ILPGVGAAAPGMARLRAAGLVDLIPTLTQPVLGICLGMQLLFASSEEEQTRCLGVIDA
                     TVQRLPASPDLPVPQMGWNELEPVGSSPLLAGVPPGAYAYFVHSYAAPPGDYTRALTT
                     YGRSFSAVIEQRNFFGTQFHPERSSRVGSRILENFLRIVL"
     gene            complement(1734..>1997)
                     /locus_tag="VIQ99_06800"
     CDS             complement(1734..>1997)
                     /locus_tag="VIQ99_06800"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007513002.1"
                     /note="catalyzes the formation of
                     3-(imidazol-4-yl)-2-oxopropyl phosphate from
                     D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and
                     histidinol from histidinol phosphate; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase"
                     /protein_id="HEY9182889.1"
                     /translation="VSIDLGGRPFLVFEAKFPRDRVGDLPTELVPHFFRSLAETLGAA
                     IHVRVRGDNTHHMVEVSFKAVARALRQAFKRQGDELPTTKGAL"
BASE COUNT          353 a          677 c          670 g          297 t
ORIGIN      
        1 gtcgcgcgtc agcgtgtcga tgccgatcac gacgcactgc gagccgaacc gcagcacgag
       61 ctcgtcaatc aggccgggac gctcgagggc gggagagttc acggagatct tgtcggcacc
      121 caggttcagc acggcttccg cgtcggccac gctgcggata ccgcccgcga cacagaacgg
      181 gatgtcgagc acggccgcga tccggttgac ccaggtgcgg tccacggtgc gctggtcggg
      241 gctggccgtg atgtcgtaga agacgagctc gtccgcgcct tcgtcgcgat agcgggccgc
      301 gagcgtcatg atgtcgccga cgaccttgtg gtcgcggaac cgtacgcctt tgacgacgac
      361 accgtcacgc acgtcgaggc aggggattat gcgccgcgta agaatggtcc gatctcctca
      421 ggcttgagct tgccttcgag cagcgctttg cccgacacgg tcgccgccac gccgacggcc
      481 gcgagcgcct cgaggtccgc gaggtgccgc acgccgccgg atgcctggaa cgcaatatcg
      541 ggccagcggc ccacgcagtc gcggtacagc gccatgttcg ggcccgatag tgcgccgtcc
      601 cgatcgatgt cggtgcacag cacgtggcgc agtcctacgg cggcgtagcc gtcgatcgcg
      661 tcagccaacg tcagcgtcga cgcacgcgtc caaccatgcg tcgcgatcat cggcgtgccg
      721 tcggccgtga ggcgtacgtc gagcgccaac gtaaatcgct ccggcccgag ctcccgcagc
      781 cacgctgtaa cgagatccgg gtcgctgacc gcaaggctgc cgatcacgac ccgcgaggcc
      841 actgggagcg cgcgttcgag gttgctgcgc gaacggatgc cgccaccgag ctgcacggcg
      901 atcccggtcg catgcatccg gcggatcagc tcgagattca cgggctcgcc gcgcttcgcg
      961 ccgtcgaggt ccacgacatg cagccactgc gcgccgaggt cccggtagtg ggccgccagc
     1021 tcgaccgggt cgaccggata gcgcgtctcc tgatcgtagt cgcccttgaa gaggcgcacg
     1081 cagcgcccgc ctcgcaggtc gatggccgga atgataatca tataaaacag tatgttacaa
     1141 aactatcctg aggaagtttt cgaggatccg gctgccgacc ctcgacgaac gttcgggatg
     1201 gaactgcgtc ccgaagaagt tccgctgctc gatgaccgcc gagaacgaac ggccgtaagt
     1261 ggtcagggcg cgcgtgtagt cgcccggagg cgcggcatag ctgtgcacga agtacgcgta
     1321 ggcgccgggc ggcacacccg cgagcagcgg tgacgagccg accggctcga gctcgttcca
     1381 acccatttgc ggtaccggca gatccgggct cgcgggcaac cgctgcaccg tcgcgtcgat
     1441 gacgccgagg caacgcgttt gctcctcctc ggagctcgcg aacaagagct gcatcccgag
     1501 acaaatgccg agcacgggct gcgtcagcgt tggaatcaag tcgaccagcc cggccgcccg
     1561 aagccgagcc atccccggcg cggcggcgcc cacgccgggc aggatcacgt ggctcgcagc
     1621 gcgaatccgg tcggggtcct cggtcaacgg gacatcggcg ccgatacgct cgagcgcgaa
     1681 cttcagcgac gccaggttcg agccgcacga cggaatgatc actgcgcgcg ccttcatagc
     1741 gcgcccttcg tcgtcggcaa ctcatcgcct tgccgtttga acgcctggcg aagcgcgcgc
     1801 gccacggcct tgaacgacac ctcgaccatg tgatgcgtgt tgtcgccgcg cacacgcacg
     1861 tggatagccg cgccgagcgt ctcggccagc gagcggaaga agtgcggcac gagctcggtc
     1921 ggcagatcgc cgacgcggtc gcgcgggaac ttcgcctcga acacgaggaa gggccgtccg
     1981 ccaaggtcga tcgagac
//
LOCUS       DATCUD010000460         1538 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61065, whole genome shotgun sequence.
ACCESSION   DATCUD010000460 DATCUD010000000
VERSION     DATCUD010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61065"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1459)
                     /locus_tag="VIQ99_06805"
     CDS             complement(29..1459)
                     /locus_tag="VIQ99_06805"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007463453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY9182890.1"
                     /translation="MRVTTTEGREIDLKPDTLDGLKTRVRGPLFVPGDVGYEESRSVW
                     NAMIDRKPAVVVRCRGTADVIACVRFAREHDILLCIKGGGHNIAGLAGADGALMLDMS
                     LMHGVWVDSQRKVARAQAGCLLGDVDRETQVHGLAGVLGFVSLTGVAGLTLGGGFGYL
                     TRRWGWTSDNVVGMDIVTAEGRLVRASGDENADLFWGLRGGGGNFGVVTGIDYALYPV
                     GPEVVGGVVAWPASQASKVLELYRELAAKAPPELTLVAIMRPAPPAPWLPKDWHGKPI
                     VALLACFSGRPEDGEKLVQPIKSFGNPIGDVLVRRPYTQIQSLLDATQPKGRRYYWKS
                     EYLPRIEPALCENLIEHAARIRSPHSAIILFQIEGALNRLEEGHSPVGNRDARYVLNI
                     TSSWEKADEDKTHIEWAREAWNDTKRFSTGGTYINFLTEDEGAERIEAALGKGLKRLA
                     EVKSKWDPENVFRTNRNIKPEKRNPL"
BASE COUNT          248 a          515 c          478 g          297 t
ORIGIN      
        1 ggcacagcgt tgttcgaatc ctcggtgctc aaagtggatt ccgtttttcc ggtttgatgt
       61 tgcggttcgt ccggaacaca ttctcgggat cccatttcga cttgacctcc gcgagccgct
      121 tgagaccctt gccgagcgcc gcctcgatgc gctcggcgcc ttcgtcctcg gtgaggaagt
      181 tgatgtacgt gccgccggtc gagaatcgct tcgtgtcgtt ccacgcctca cgcgcccatt
      241 cgatgtgcgt cttgtcctcg tccgcctttt cccacgagct cgtaatgttg agcacgtagc
      301 gcgcgtcgcg gttgccgacg ggagagtgtc cctcttcgag gcggttcagc gcgccttcga
      361 tctggaacag gatgatcgcc gagtgaggcg atcggatcct tgccgcgtgc tcgatgaggt
      421 tctcgcacag agccggttcg atgcgaggga ggtactcgct cttccagtag tagcggcggc
      481 ccttcggttg ggtcgcgtcg agaagcgact gaatctgggt gtacggccgc cgcaccagca
      541 cgtcgccaat gggattgccg aacgacttga taggctgcac gagcttctcg ccgtcctcgg
      601 gtctgccgct gaagcaggcc agcaaggcga cgatcggctt cccatgccag tccttcggaa
      661 gccacggcgc ggggggcgcc ggtcgcatga tcgcgacgag cgtaagttcg ggtggggcct
      721 tcgccgccag ctcgcgatac aactcgagca ccttggacgc ttggctggca ggccaggcga
      781 caacgccgcc gacgacctcc ggaccgaccg ggtagagcgc gtaatcgatg ccggtcacga
      841 cgccgaagtt cccgccgcca ccccgcagcc cccagaagag atcggcgttc tcgtcgccgc
      901 tcgcgcgtac gagccgtccc tcggcggtca ctatgtccat cccgacaacg ttgtctgacg
      961 tccatcccca acgcctcgtc aggtagccga atcccccgcc aagagtgagc cctgcgacgc
     1021 cggtgagcga aacgaagccg aggacgccgg cgagcccatg cacctgcgtt tcgcgatcca
     1081 cgtcgccgag caggcaaccg gcctgcgcgc gggccacctt tctctggctg tccacccaca
     1141 cgccatgcat gagagacatg tcgagcatca gggcgccgtc ggcgccggcc aggcccgcaa
     1201 tgttgtgtcc accgcccttg atgcagagca ggatgtcgtg ctcacgcgcg aaccggacgc
     1261 acgcgatcac gtcggcagtg ccgcggcagc gcacgacgac agcgggtttt ctgtcgatca
     1321 tggcgttcca gacgcttcgg gactcctcgt agccgacgtc gccaggcacg aacagcggtc
     1381 cccgaacacg cgtcttcaaa ccgtcgagtg tgtccggctt caaatcgatc tcgcggccct
     1441 ccgtcgttgt cactctcatg tccagggctc ctttctgtcg atgttgcggc gtgcgcgtgt
     1501 cttaggggcg tagtccaacg tgttgacgcc gaacacgc
//
LOCUS       DATCUD010000461         7790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_68653, whole genome shotgun sequence.
ACCESSION   DATCUD010000461 DATCUD010000000
VERSION     DATCUD010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 7790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7790
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68653"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..831
                     /locus_tag="VIQ99_06810"
     CDS             <1..831
                     /locus_tag="VIQ99_06810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182891.1"
                     /translation="IIRSRWRASNVGHSRVAALVLLAVLAGCDSGSDSAVADTSPETR
                     RPTPRHPDGQIRFDSEPGSRGYWGEASVSSLFEKGVQVVIDEKGLLANIADAPRVAPF
                     QPWALALYEYRQKNGLKDDPTRACIAPSGPRHLHTAGGFRIIRDPTYDRMYILFGGGN
                     RNWRVVFMDGREPPNPEEVSGTYFGHQAGHWEGDTLVVESSGYNARFWFSNGGLPHTE
                     ALHLTERFSRPDFDTLKYEVTIDDPLTYTRPWTAEWTVDWVDGGEITEQFCEDRREGE
                     "
     gene            835..1257
                     /locus_tag="VIQ99_06815"
     CDS             835..1257
                     /locus_tag="VIQ99_06815"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182892.1"
                     /translation="MLRTALRWIVGGVGSILMASAEAHHSFRAQYDSTKPIEVTGYVT
                     KIDWMNPHVYFYIDVVNPEGKTESWAFEMGPPHMLEQRGWKRNSMAIGDELEVSGTRA
                     RDGSLTANARTVKLKATGEVLGAASSEGQTITQGAPAR"
     gene            1262..2041
                     /locus_tag="VIQ99_06820"
     CDS             1262..2041
                     /locus_tag="VIQ99_06820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182893.1"
                     /translation="MVMRYLVVLAASAALWTAASAQPIPRNPDGTISFAGTKDDVGNW
                     EGPPGTSLANNVFEDALEPNPLNLPTNLSVEDVPFQPWARALYDQRQRTFTKDDPHTR
                     CKPSGGARLFHTPYGFEILQLADTKEIMFLTVGAPHSWRVVHMDGRPLPENPSPSWYG
                     TSVGRWEGDTLVIDTVGFNDRFWISREGVPHTPQLRTTERISRPRFDLLRYEITIDDP
                     GAYTKPWSGGWNIPWSAGNEPFDYLCQDNNLDPARMVGPSP"
     gene            2041..2868
                     /locus_tag="VIQ99_06825"
     CDS             2041..2868
                     /locus_tag="VIQ99_06825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182894.1"
                     /translation="MRSARLALLLVCGAAVSVLALARDAAAQFRDLSQGRPAPRTADG
                     RISLSGTADEAGNWEGSTANGAELIYPTPEDDPRNGTDALPTNLSVEQVPFQPWARAL
                     FNYRQRTYLKDEPHVRCKPSGVARLFHTPYGLEILDLPDSGEMIFVGVGSPHSWRVVD
                     LRATEHAADPAPTRYGHSIGHWEGDTLVIDTVGFAASFWMNRLGLPHTEQLHTIERIS
                     RPNFDTLIYEVTIDDPGAYTATWSGGFYLNWRKGNEPFDYLCQDNNLDPERLVGPED"
     gene            complement(2958..4214)
                     /gene="rho"
                     /locus_tag="VIQ99_06830"
     CDS             complement(2958..4214)
                     /gene="rho"
                     /locus_tag="VIQ99_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005003334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEY9182895.1"
                     /translation="MNLSELKTRPAAALVQLAESMGLENLARSRKQDIIFSILKAHAK
                     NGENIFGEGVLEILQDGFGFLRSADGSYLAGPDDIYVSPSQIRRFNLRTGDTVSGLIR
                     PPKDGERYFALLKVGEINHDAPENAKSKVLFENLTPLFPKKRLKLEQGNGSTEDLTAR
                     IIDMVAPIGKGQRGLIVSPPKAGKTMLLQNIAASIAANHPDVQLIVLLIDERPEEVTE
                     MERTVRGEVVSSTFDEPATRHVQVAEMVIEKAKRLTEHKQDVVILLDSITRLARAYNT
                     VVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSKMDDVIYEE
                     FKGTGNMEIHLDRRIAEKRVFPAININRSGTRKEELLTAPDELQKMWVLRKVLHPMDE
                     LAAVEFLLSKLQDTKTNADFFESMNR"
     gene            complement(4426..4779)
                     /gene="trxA"
                     /locus_tag="VIQ99_06835"
     CDS             complement(4426..4779)
                     /gene="trxA"
                     /locus_tag="VIQ99_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006026981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEY9182896.1"
                     /translation="MSDQIVHTTDAAFEQDVVKSPQPVLLDFWAEWCAPCKMIAPLLD
                     TIAAEYKDKLRVVKLNIDQNPKTPPKFNIRGIPTLLLFRDGSVAAQQVGAVSKAQLES
                     FLETHLKWQKEAVKP"
     gene            5046..6302
                     /locus_tag="VIQ99_06840"
     CDS             5046..6302
                     /locus_tag="VIQ99_06840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018954134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY9182897.1"
                     /translation="MRFADLPLSAGLQRGIADAGFSQCTPIQSKTLPIALEGQDVAGQ
                     AQTGTGKTAAFLLAMFHRLENTPRPAVDAGPPAPRALILAPTRELAVQVHADATALGK
                     HLPFTLGLAFGGTDYDKQRDQLAAGVDVLIGTPGRIIDFYKQRVFGLRGIQVLILDEA
                     DRMFDLGFIKDIRYILRRLPEHHRRLNMLFSATLSHRVLELAYEHMNDPELVRIEPDK
                     MTVDRVTQSIYFPAMEEKLPLLLTLLRDRDPHRTMIFVNTRREADRLRDALVHNGIKA
                     EALSGDVPQKKRLRMLKDFQAGELAVLIGTDVASRGLHVPGVSHVFNYDLPQDPEDYV
                     HRIGRTARAGATGDAISFGCETYAISLPDIEAFIGRKIPVATFDHSALVTALPNAPRT
                     PRPHHGGDGHRRGRPPRGRRPQHARR"
     gene            complement(6380..6664)
                     /locus_tag="VIQ99_06845"
     CDS             complement(6380..6664)
                     /locus_tag="VIQ99_06845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013305755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182898.1"
                     /translation="MESLLPLIVQLVSGAVGGNIAGAALKNLSLGTVLNSVVGILGGG
                     LGGQILGMLGIATGGGEMDLGGIAGSVAGGGVGGAVLLAIVGAVKKALAK"
     gene            6752..>7790
                     /locus_tag="VIQ99_06850"
     CDS             6752..>7790
                     /locus_tag="VIQ99_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182899.1"
                     /translation="MQQAQAAPFARRCMSIPATTYFVVAEELVARRCLVRRVENGELV
                     SSVARLLGQKALVIRLFTLSTLIFLGALLTTSLARSQEAVPEEPGDEPTEEIVVTGQQ
                     SDDARLREYVTNFVMEIGDTTSSWHGYARWRKSICVGVVNAPTTGGAEFIADRVGDIA
                     RELGLAPQGQGCTPNIVMIFARDAAAVASRWVDSNPRLFRPFGGEGGTTQGVAALQAF
                     ATTDAPVRWWQISMVVDWSGQPAFPTPTQPEFGIKGPLSGQASVAGANSNIVNSVEGE
                     LTQAFMIVDTTKLGRVSWEQLADYAAMVALAQIDPDGNAAGYDSILNLFQSPSSVAGL
                     TDWDWSYLRALY"
BASE COUNT         1363 a         2522 c         2483 g         1422 t
ORIGIN      
        1 atcatccgtt caagatggcg cgcgagtaac gtgggccatt cgcgtgtcgc agctctggtt
       61 ctgctggcgg tcttggccgg ctgcgacagc gggtcggact ccgcggtagc cgatacgtcg
      121 cccgagactc gcagacctac accgcgccac cccgacggcc agatacgctt cgacagcgag
      181 cccggcagcc ggggttactg gggcgaggcg agcgtgagct ccttgttcga gaagggcgtg
      241 caggtcgtca tcgacgagaa gggcctgctc gcgaacatcg ccgacgcgcc gcgcgtggcg
      301 ccgtttcaac cctgggcgct cgcgctctac gagtaccggc aaaaaaacgg cctgaaggac
      361 gacccgacgc gtgcgtgcat cgctccgtcg gggccacggc acctgcacac ggcaggtgga
      421 ttccggatca ttcgggatcc gacttacgac cgaatgtaca tcctgttcgg cgggggcaat
      481 cgcaactggc gcgtcgtgtt catggacggg cgcgagccgc cgaatcccga ggaagtctcg
      541 ggcacctatt tcggccacca ggccggtcat tgggaaggcg acacgctggt cgtcgagtcg
      601 agcggctaca acgcccgctt ttggttctcg aacggcgggc tgccacacac ggaggcgttg
      661 cacctcacgg aacgtttctc gcgtccggat ttcgacacgt tgaaatacga ggtcaccata
      721 gacgatccgc tgacgtacac gcgtccgtgg accgcggaat ggacagtcga ctgggtcgac
      781 ggcggagaga tcaccgagca attttgcgaa gaccgtcgcg aaggagagtg agtcatgtta
      841 cgcacggcat tgcgatggat cgttggcggg gtgggttcga tcctgatggc atcggcggag
      901 gcccatcatt cgtttcgagc gcaatacgat tcgacgaagc ccatcgaggt caccggttac
      961 gtgacgaaga tcgattggat gaatccccac gtctatttct atatcgacgt cgtgaatccg
     1021 gaaggcaaga cggagagctg ggcgttcgag atgggtccgc cgcacatgct cgagcagcgc
     1081 ggctggaaac gtaactcgat ggcgatcggc gacgagctag aggtcagcgg cacgcgcgcg
     1141 cgcgacggca gcctgaccgc gaatgcgcgc accgtgaagc tcaaggctac gggcgaggtc
     1201 ctcggagcgg catcgagcga aggtcagacg atcacgcagg gcgctcccgc gcgctaggcc
     1261 cgtggttatg cgctacctcg tcgtgctggc ggcttcggca gcgttgtgga cggcggccag
     1321 cgcgcaaccg attccccgca atccggacgg tacgatcagc ttcgccggca cgaaggacga
     1381 cgtcggcaac tgggagggcc ccccgggcac gtcgctcgcg aacaacgtgt tcgaggacgc
     1441 gctcgagccg aatcccttga acctgccgac gaacttgagc gtcgaggacg tgccgttcca
     1501 gccgtgggct cgcgcgcttt acgaccaacg ccagcgcacc ttcacgaagg acgatccgca
     1561 cacgcgctgc aagccgtccg gcggtgcgcg gttgttccac acaccgtacg gattcgagat
     1621 tctgcagctc gccgacacca aagagatcat gttcctgacc gtcggcgcgc cgcactcgtg
     1681 gcgcgtcgtt cacatggacg ggcggccgtt gccggaaaat ccctcgccgt cttggtacgg
     1741 cacgtcggtg ggccgctggg aaggcgacac gctcgtgatc gacacggtcg gcttcaacga
     1801 tcgtttctgg atctctcgcg aaggcgtgcc gcacacgccg caattgcgca cgaccgagcg
     1861 catttcacgc ccgcggttcg atctgctgcg ctacgagatc acgatcgacg accccggtgc
     1921 gtacacgaag ccatggtcgg gcggctggaa cataccgtgg agcgcgggaa acgagccgtt
     1981 cgattatctg tgccaggaca acaatctcga cccggcgcgg atggtggggc cgagcccgtg
     2041 atgcgaagcg cgcgcctcgc attgctgctc gtctgcggcg ccgccgtgag cgtcctcgcg
     2101 cttgcgcgcg atgcggccgc gcaatttcgt gacctctcgc aaggccggcc ggcaccgcga
     2161 accgcggatg ggcgcatcag cttgtccggg acggccgacg aagcgggcaa ctgggaaggc
     2221 agcacggcca acggcgcgga gctcatctac ccgacgcccg aggacgatcc gcgcaatggc
     2281 accgatgcgt tgccgacgaa tctgtcggtg gagcaagtgc cgttccagcc gtgggcacgc
     2341 gcgctgttca attaccgcca gcggacctac ctcaaagacg agccgcacgt tcgctgcaag
     2401 ccctcgggcg tcgcgcggct gttccacacg ccctatgggc tcgagatcct ggacctgccg
     2461 gactccggcg agatgatctt cgtcggcgtc ggcagcccgc acagctggcg cgtcgtcgac
     2521 ttgcgcgcga cggagcacgc ggccgacccc gcgcccacgc gctacggaca ttcgatcgga
     2581 cactgggagg gcgacacgct cgtgatcgac acggtcgggt tcgccgcctc gttttggatg
     2641 aatcgcctcg ggctgcccca cacggagcag ctccacacga tcgagcgcat ctctcgaccg
     2701 aacttcgaca cgctgatcta cgaagtcacg atcgacgatc ccggcgcgta taccgcgact
     2761 tggtccggcg gcttctacct caattggcgc aagggtaacg agccgttcga ctatctgtgc
     2821 caggacaaca acctcgatcc cgagcggctc gttggaccgg aggattgagg gcggcgaacg
     2881 tccgccgagc acagcgggcc gccgctatgt gcgccggacg aggcccgtgg gccggcgacg
     2941 gtctatcgaa tccactgcta gcggttcatc gactcgaaga agtcggcgtt cgtcttcgtg
     3001 tcttgcagct tcgacagcaa gaactcgacg gccgcgagct cgtccatcgg gtgcagcact
     3061 ttgcggagca cccacatttt ctggagctcg tccggcgccg tcagcagctc ttccttacgc
     3121 gtgccggagc gattgatgtt gatcgcggga aacacgcgct tctcggcgat acggcgatcc
     3181 agatggatct ccatgttgcc ggtgcccttg aactcctcgt agatgacgtc gtccatcttc
     3241 gagcccgtgt cgatcagcgc cgtggcgatg atcgttaggc tgccgccctc ctcgatgttg
     3301 cgcgccgcgc cgaagaaccg cttcggccgc tgtagcgcgt tcgcgtcgac accgcccgtc
     3361 agcaccttgc ccgacgacgg cacaacggtg ttgtaagcgc gcgcgaggcg cgtgatcgag
     3421 tcgagcagga tcacgacgtc ttgcttgtgc tcggtgagcc gcttcgcctt ctcgatgacc
     3481 atctcggcca cctgcacgtg gcgtgtcgcc ggctcgtcga aggtgctcga cacgacctcg
     3541 ccgcgcacgg tgcgttccat ctccgtgacc tcttccggcc gctcgtcgat caagagcacg
     3601 atgagctgaa cgtccggatg attcgccgcg atcgaagctg cgatgttctg cagcagcatc
     3661 gtcttgcctg ctttcggcgg agagacgatg aggccgcgct ggcctttgcc gatgggcgcg
     3721 accatgtcga tgatgcgcgc cgtcaagtcc tcggtgctgc cgttgccctg ctcgagcttc
     3781 agccgcttct tcggaaacag cggcgtcagg ttctcgaaca gcaccttgct cttcgcgttc
     3841 tcgggcgcgt cgtggttgat ctcgccgacc ttcagcagcg cgaagtagcg ctccccgtct
     3901 ttcggcggcc gaatcagccc ggacaccgtg tcgccggtac gcaggttgaa gcgccgaatc
     3961 tggctcgggc tcacgtagat gtcgtcggga ccggccagat acgaaccgtc tgccgagcgc
     4021 aggaaaccga aaccgtcctg caggatctcg agcacgccct cgccgaagat gttctcgccg
     4081 ttcttcgcgt gcgccttgag gatcgagaag atgatgtctt gcttacggga cctggcgagg
     4141 ttctcgaggc ccatcgactc ggcgagctgc accaacgcgg ccgcgggccg cgtcttgagc
     4201 tcggacaagt tcattgcttt cttggtcgac tcgagctccg cggctggaat gacgtcgaac
     4261 tcttcgtcat ccgggaactc ctcgcgcatc ggcccgccgc cgccaccgcc gcgattgcgg
     4321 cgaccgcgct tgccgttgcc gtccccgcct tgatgcgggc cgccgtcttt cattcgtgca
     4381 cgcgccgaat tgcctagata tcccctcacg actgcatcct gagcgttatg gcttgactgc
     4441 ttctttctgc catttgagat gtgtctcgag aaaactctcg agttgtgctt tggaaactgc
     4501 gcctacctgt tgcgcggcga cagagccgtc acggaacagg agcaaggtgg gaatgccgcg
     4561 gatattgaat tttggcggcg tcttcggatt ttggtcgatg ttcagcttga cgacacggag
     4621 cttatctttg tattcggctg cgatcgtgtc cagtaatgga gcgatcatct tgcaaggcgc
     4681 acaccactcg gcccaaaaat cgagcaatac aggctgcggc gatttcacga catcttgttc
     4741 aaaggccgcg tcggtcgtat gtacgatctg gtcactcact ctgttgaatc ctctgagttc
     4801 tgaccgcccc cacgaccccc cttggggcgg acgggcgtaa gtcgataacc cggttgagcc
     4861 gagccgaaag tgacgccgcc taacgcgtca ggcacaattc gcggcgggtg cttccttcga
     4921 ggctcgcagg aatctgtggg tatctaggag ggcgtgctgt tatttttaac tgccggaacg
     4981 ccaatttgca agtgtcgagg tctgatatag ataccgcccc tcaaacgagc caccatctca
     5041 ccgatttgcg cttcgcggac ctaccattat cggcaggact gcagcggggc atcgcggacg
     5101 cggggttctc ccaatgcacc ccgattcaga gcaagacatt gccgatcgcg ctcgagggcc
     5161 aggatgtcgc gggccaagcc caaacgggga cgggtaagac tgcggcattt ctgctcgcga
     5221 tgttccatcg cctcgagaat acccctcgtc ccgcagtaga cgccggaccg cccgcgccgc
     5281 gcgcgctgat cttggcgccg acgcgcgagc tcgcggtgca ggtccatgcg gacgcaaccg
     5341 cgctcggcaa gcacttgccg ttcactctcg gcctcgcctt cggcggcacg gattacgaca
     5401 agcaacgcga tcagctcgca gccggcgtcg acgtcctgat cggcacaccg ggccgcatca
     5461 tcgatttcta caaacagcgc gtgttcggtc tgcgcggaat ccaggtgctg atcctcgacg
     5521 aagcggatcg catgttcgat ctcggcttca ttaaggacat tcgctacatc ttgcgccggc
     5581 taccggagca tcaccggcgt ttgaacatgt tgttctccgc cacgctctcg catcgcgtgc
     5641 tcgagctcgc ctacgagcac atgaacgatc ccgagctggt tcgcatcgag ccggacaaga
     5701 tgaccgtcga tcgcgtgacg cagtcgatct acttcccggc gatggaggag aagctgccgc
     5761 tccttttgac gctgctgcgc gatcgcgacc cgcatcgcac gatgatcttc gtgaacacgc
     5821 gccgcgaagc agaccgcctc cgcgacgcgc tcgttcacaa cggcatcaag gccgaggcgt
     5881 tgtcgggcga cgtgccgcaa aagaagcgcc tccggatgct gaaggatttt caggccggcg
     5941 agctcgcggt tctgatcggc acggacgtcg cctcgcgcgg cctgcacgtg ccgggcgtga
     6001 gccacgtgtt caactacgac ttgccgcagg atcccgaaga ctacgtgcat cgaatcggcc
     6061 gcacggcgcg cgcgggcgcg accggtgacg cgatcagctt cggctgcgag acgtatgcga
     6121 tctcgttgcc ggacatcgag gcgttcatcg gccgcaagat tccggtcgcg accttcgatc
     6181 acagcgcgct cgtgacagcg ttgccgaatg cgccgcgcac gcctcggccg catcacggcg
     6241 gcgacggcca ccgccgcggc aggccgccgc gcgggcgccg gccgcaacac gcgcgccgct
     6301 gacattaagt tctgctcgcg ctcgtatgcg cggcggctgc ggccagcatc accccggcac
     6361 gcggtaaccg cgacgccggc tacttggcga gcgctttttt cacggcaccg acgatcgcga
     6421 gcagcaccgc gccgcccacg ccgccgccgg cgacgctgcc tgcgatgcca ccgagatcca
     6481 tctcgccgcc gcccgttgcg atgccgagca tgccgaggat ctgaccgccg agaccgccgc
     6541 cgagaatgcc gaccacggag ttgagcaccg tgccaagcga tagattcttc aaggccgcac
     6601 ccgcgatgtt gccgccgacg gcgccgctga cgagttgcac gatgagtggc agtaggcttt
     6661 ccatttcgtt tcccccgctt cgttgttgtg attgacgagg agaccgcgtg accccgctcg
     6721 cagggcgcgc gcggtccagc ctaggcccat cgtgcagcag gcgcaagcgg cgcctttcgc
     6781 gcgccgatgc atgtcgatcc cggcgaccac ctattttgtg gtcgcggaag agcttgttgc
     6841 gcggcggtgc ctggtgcgtc gcgtcgaaaa cggcgagttg gtatcctcgg tggcgagact
     6901 ccttgggcag aaggcgctcg tgatacggct ctttacgctg agcacgctga tatttctcgg
     6961 tgcacttctg acgacgtcgc ttgcacggtc gcaggaagcc gtgccggagg aacccggcga
     7021 cgaaccgacc gaggaaatcg tcgtcacggg ccagcagtcg gatgacgcgc ggctgcgcga
     7081 gtacgtgacg aacttcgtga tggaaatcgg cgacaccacc agctcatggc acggttacgc
     7141 acggtggcgg aagtcgatct gtgtcggcgt ggtcaacgcc ccgaccacgg gaggcgcgga
     7201 gttcatcgcc gaccgcgttg gagacatcgc acgcgagctc gggctcgcgc cacaagggca
     7261 gggctgcaca cccaacatcg tcatgatctt cgcgcgggac gcagcggcag tcgcaagccg
     7321 atgggtggat tcgaacccgc ggctgttccg acccttcggt ggtgagggtg gcaccactca
     7381 gggcgtcgcg gcgctgcagg ctttcgctac gacggatgcc ccggtgcgct ggtggcagat
     7441 ctcgatggtg gtcgactggt cgggtcaacc agccttcccc acaccgaccc aacccgagtt
     7501 cggaatcaag ggtccgctca gcggacaggc gtccgtcgcc ggggcgaact cgaatatcgt
     7561 caatagcgtg gagggcgagc tgacacaagc cttcatgatc gtcgatacga cgaagctcgg
     7621 tcgcgtgagc tgggagcagc tcgcggacta tgccgcaatg gtcgccttgg cccagatcga
     7681 ccctgacgga aacgcagcgg gttacgactc cattctgaac ctgttccagt cgccgtcgtc
     7741 cgtcgccgga ctgaccgatt gggactggtc ctatctgcgc gcgctgtatg
//
LOCUS       DATCUD010000462         1748 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54365, whole genome shotgun sequence.
ACCESSION   DATCUD010000462 DATCUD010000000
VERSION     DATCUD010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54365"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1614)
                     /locus_tag="VIQ99_06855"
     CDS             complement(<1..1614)
                     /locus_tag="VIQ99_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY9182900.1"
                     /translation="MLVNATQREELRVAMVDGQKLYDLDIEVPSREQRKSNIYKGRIT
                     RIEPSLEACFVDFGVQRHGFLPLKEISSEYFVKQPESGDRVQIREVLREGQEIVVQVD
                     KEERGTKGAALTTFISLAGRFIVLMPNNPGAGGVSRRIQGEERDTVRQSLEDLQIPDG
                     MGCIVRTAGIGRSTEELKWDVDYLLRVWEAIKQVVVTRPAPFLIYQEGNAIVRALRDY
                     FSNDIGEILIDNPSVYQEAVEFMERVLPHNIKRLKLYEDNTVPLFTRYQIESQIESAY
                     GHKVQLPSGGSIVIDRTEALTAIDINSARSTKGEDIEETALNTNLEAADEIGRQLRIR
                     DLGGLVVVDFIDMGPQRNQREVEDRLRAAVRHDRARIQIGKISRFGLLEMSRQRLRPS
                     LEESTQSTCPRCNGAGNIRSVESLALAILRLVGEEARKERTAKVIAQLPMDVANYVLN
                     EKRDWVQTLQDANNVTVVLLGNPDLETPNYTLRRVRDDEVTLPENTGTSYKLVAPKPD
                     PSVAYEEIKRQPKTEEAAVSNVLPSTPAPT"
BASE COUNT          278 a          542 c          563 g          365 t
ORIGIN      
        1 ggtcggggcc ggcgtgctcg ggagaacgtt cgagacggcg gcctcttcgg tcttcggttg
       61 acgcttgatc tcctcgtaag cgacgctcgg atccggtttc ggtgccacga gcttgtagct
      121 cgtgccggtg ttctcgggca gcgtgacctc gtcgtcgcga acgcggcgca aggtgtagtt
      181 cggcgtctcg agatccggat tgccgagcag cacgacggtc acgttgttgg cgtcttgaag
      241 cgtctggacc caatcgcgct tctcgttcag cacgtagttc gcgacgtcca tcggcaactg
      301 cgcgatgacc ttggccgtac gctccttacg cgcctcctcg ccgacgaggc gcaggatcgc
      361 gagcgcgagc gattcgacgc tgcggatgtt accggcgcca ttgcagcgcg ggcacgtcga
      421 ttgggtcgat tcctcgagcg atgggcgcag ccgttggcgc gacatttcga gcagaccgaa
      481 ccgcgagatc ttgccgattt gaattcgcgc gcggtcgtga cgcacggccg cgcgcagccg
      541 gtcctcgacc tcgcgttgat tgcgctgcgg gcccatgtcg atgaagtcga cgacgacgag
      601 ccctccgagg tcgcgaatcc gcagctgccg ccctatctca tcggcggcct cgaggttcgt
      661 gttcagcgcc gtttcctcga tgtcctcgcc tttggtcgag cgcgcggagt tgatgtcgat
      721 ggccgtcagc gcctcggtcc gatcgatcac gatgctgccg cccgaaggca gttgcacctt
      781 gtggccgtag gccgattcga tctggctctc gatctggtac cgcgtgaaca gcgggaccgt
      841 gttgtcctcg tagagcttca gccgcttgat gttgtgcggc agcacgcgct ccatgaactc
      901 gacggcttcc tgatagacgc tcgggttgtc gatcaggatc tcgccgatgt cgttcgagaa
      961 gtagtcgcgc agcgcgcgca cgattgcgtt gccttcctgg tagatcaaga acggggcggg
     1021 tcgagtgacc acgacctgct tgatggcctc ccagacccgg agcaggtagt ccacgtccca
     1081 cttcagctcc tcggtgctgc ggccgatgcc ggccgtgcgg acgatacagc ccatgccgtc
     1141 ggggatctgc aggtcctcga gggactgacg taccgtatcc cgctcctcgc cctgaatccg
     1201 gcgcgagaca ccgccggcgc cggggttgtt cggcatcagg acgatgaaac gccccgccag
     1261 gctgatgaaa gtcgtcaggg cggcgccctt cgtgccgcgt tcttccttgt cgacttgaac
     1321 gacgatttcc tggccttcgc gcaggacttc gcggatctgg acccggtcgc ccgattcggg
     1381 ctgcttgacg aaatactcgc tcgagatttc cttcagcggc aggaagccgt ggcgctggac
     1441 gccgaagtct acgaaacagg cctctaggct cggctctatc cgagtgatgc ggcccttgta
     1501 gatgttcgac ttgcgttgct ctcgggacgg tacctcgatg tcgagatcat agagcttttg
     1561 gccatccacc atggccacgc gcaactcttc ccgttgagtt gcattcacca acattcgctt
     1621 catagatcct cagtgcatga gcggcgtgca cggagcttcg gtggaaaacc gcaatctgcg
     1681 agtgagtgcg gcgcgggcga cgcccggcgc tgcacgatga agaaagcaga ggaatgggtc
     1741 gatccgtg
//
LOCUS       DATCUD010000463         2060 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97091, whole genome shotgun sequence.
ACCESSION   DATCUD010000463 DATCUD010000000
VERSION     DATCUD010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2060
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97091"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VIQ99_06860"
     CDS             complement(<1..313)
                     /locus_tag="VIQ99_06860"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY9182901.1"
                     /translation="MILRSLLFVPGNKANMLEKALGLTPDAFAPDMEDSVPAAEKANA
                     RETIAKFLPRLAATGIPVIPRVNSLDTDWIEADLAAVVGAEIFGISVGKVRSAGDISA
                     IS"
     gene            468..1046
                     /locus_tag="VIQ99_06865"
     CDS             468..1046
                     /locus_tag="VIQ99_06865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9182902.1"
                     /translation="MSVAEGDYVRRPTRNEGERASGDVDYAALWGRFHTRLLILGLRR
                     LGNRADAEDMAQDALQRVAKALSENRLRESGALPGFVFQTALHVCQQSLRKRYRERRA
                     LAGYADSSLEEDGVAQPLIDLIDEERRRVVRLALQSLDADDRQLLEQLYAREADPEQL
                     AGQLGISPGTLRVRKHRALKRLSAVLGEEVTQ"
     gene            1108..1683
                     /locus_tag="VIQ99_06870"
     CDS             1108..1683
                     /locus_tag="VIQ99_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182903.1"
                     /translation="MKDETPSGSDEKRIQEYLAGRLSAAEAELFEQRLFTDDDFAAEV
                     QRALEIRAAMAPAAVKRAAGGPPRRALFALAAAAGAAFLVVGVMWLRPPAAPVFRGVE
                     QRMGLEVEVDGDALHARWQPIAGAAGYELRVFATDGRLLRNLETEGAVSTLDLGTPAD
                     SASAPAFVEVSALDELGQVLQRSDRVGLSDR"
     gene            1733..>2060
                     /locus_tag="VIQ99_06875"
     CDS             1733..>2060
                     /locus_tag="VIQ99_06875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182904.1"
                     /translation="MLLMAGVAFAAAASAQQTAADPTVAELRRLLDGGRYADAEREAR
                     RALAAMEGTGTAASANAADVLDLLVAALWRGGKAADAGAAGFAERAIEIRQELLGADA
                     PALATSL"
BASE COUNT          318 a          686 c          723 g          333 t
ORIGIN      
        1 gggagatcgc gctgatgtcg ccggcgctgc gaaccttgcc gaccgagatc ccgaagattt
       61 cggcgccgac gaccgcggcg aggtcggcct cgatccagtc ggtatcgagc gagttcactc
      121 gcgggatcac gggaatgccc gtggccgcga gccgcggcag aaacttcgcg atcgtctcgc
      181 gcgcgttcgc cttctcggcg gccggcacgg aatcctccat gtccggcgcg aacgcatcgg
      241 gcgtcagccc gagcgccttc tcgagcatgt tggctttgtt gccgggcacg aacagcaggc
      301 tgcgcaggat cacgcgtggg tccccatatc cccgattctc tcggtacctg gcgtcgcagg
      361 ttaacaccgc ggcccgcctt tggcggtagg tgagggcgga gccgagtcac cccctgctgc
      421 cgacgtccag gcttgtatac ttcccgtaca acaaccaaca acaagttgtg tcagtggccg
      481 agggggacta cgtcagacgg ccgacccgta acgaaggcga gcgcgcctcc ggcgacgtcg
      541 attacgcggc tctttggggc cgatttcaca cgcgcttgct cattctcggg ctgcgtcgcc
      601 tcggcaaccg cgccgatgca gaggacatgg cgcaagacgc gctccagcgc gtggcgaagg
      661 ccttgagcga gaaccggctg cgcgagtccg gggcgttgcc cgggtttgtg tttcagaccg
      721 cgctccatgt gtgccaacag tcgttgcgga aacgctatcg cgaacggcgc gcgctcgcgg
      781 gatacgcgga ctcgtcgctc gaagaggacg gcgtagcaca gccgctgatc gatctcatcg
      841 acgaagagcg tcgccgcgtc gtgcggctcg cgctccaatc gctggacgcg gatgaccgac
      901 agttgctgga gcagctctat gctcgcgaag ccgatcccga gcagctcgct gggcagctcg
      961 ggatcagccc gggcaccttg cgcgtgcgca agcatcgggc attgaaacgg ctctcggcgg
     1021 tgctcggcga ggaagtaaca caatgatcga tgcgggcact ctacgtgtga ccctccgcag
     1081 ctgccgtagc gactcgtggg agagcgcttg aaggacgaaa cgccatccgg ttccgacgaa
     1141 aagcggatac aggagtatct ggccggccgt ctctccgccg ccgaagccga gctcttcgag
     1201 cagcggctgt tcacggatga cgacttcgct gccgaggtcc agcgcgcgct cgagatccgg
     1261 gcggcgatgg cgcccgccgc cgtcaaacgc gcggcaggcg ggccaccgcg gcgtgcgttg
     1321 ttcgctctcg ccgctgcggc gggtgccgcg ttcctcgtgg tcggggtcat gtggctacga
     1381 ccgccggcgg caccggtatt tcggggcgtc gagcagcgca tggggctcga ggtcgaggtc
     1441 gatggcgacg cgctacacgc ccgttggcag ccgatcgccg gcgcggccgg ttacgagctc
     1501 cgggtgtttg cgaccgacgg ccgcctgctg cggaacctcg agacggaagg tgcggtgtcc
     1561 accctcgatc tgggcacgcc ggccgactcg gcctccgcgc cggctttcgt agaagtcagc
     1621 gcactcgatg agctcggcca agtgctgcaa cgctcggacc gtgttggcct gtcggatcga
     1681 tgaccgcgca aggagccacg tgatgaacgg agctcgagcc ccgcgcgtcg gcttgctgct
     1741 gatggccggc gtggctttcg cggcggccgc gagcgctcaa caaacggccg cagaccccac
     1801 ggtcgccgag ttgcgtcgct tgctcgacgg cggccgctac gccgacgcgg agcgcgaggc
     1861 gcgccgcgcg ctcgccgcca tggaaggcac agggaccgcg gcatcggcga atgccgccga
     1921 cgtgctcgac ctcttggtcg ccgccttgtg gcgcggtggc aaggcggcgg atgcgggagc
     1981 ggctggcttt gccgagcgcg ccatcgaaat tcggcaggag ctgctcggcg ccgatgcccc
     2041 cgccctcgcg acgagcctcg
//
LOCUS       DATCUD010000464         2155 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_25951, whole genome shotgun sequence.
ACCESSION   DATCUD010000464 DATCUD010000000
VERSION     DATCUD010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2155
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25951"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..958)
                     /locus_tag="VIQ99_06880"
     CDS             complement(<1..958)
                     /locus_tag="VIQ99_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004999847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9182905.1"
                     /translation="MSTPAPTAPPPAAPPADPNVVNVEVNGVPLKARKGQMIIEVTDR
                     ADIYVPRFCYHPKLSIAANCRMCLVEVEKAPKPLPACATPVAEGMKIFTRSKRALSAQ
                     KATMEFLLINHPLDCPICDQGGECELQDLAMGFGRGVSRYTEKKRIVKDKSLGPLVST
                     DMTRCIHCTRCVRFGQEIAGIQELGVNFRSDRSEIGTYIEKSVDHELSGNIIDLCPVG
                     ALNNKPYRYSARAWEMVAKPLVSPHDCAGSNLYAHVLRGKLRRVVPRDNEAINEAWIS
                     DRDRFSCHAIYSAERLLKPRVKHGASWVEVGWQDGLSAAVGIL"
     gene            complement(955..>2155)
                     /gene="nuoF"
                     /locus_tag="VIQ99_06885"
     CDS             complement(955..>2155)
                     /gene="nuoF"
                     /locus_tag="VIQ99_06885"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017925961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEY9182906.1"
                     /translation="VLRGELTRDAIIDEVKKSGIRGRGGAGFPTGVKMSFMPRNAPMQ
                     KYLVCNSDESEPGTCHDRDILRYNPHALVEGLALESYAIGATVAYNYIRGEFMAEPIP
                     RFEAALKEAYAAGLLGKNIRGSGIDQDIYTFVGAGAYICGEETALLESLEGKQGKPRF
                     KPPFPANFGLYGAPTTINNTQSVASLPTILRKGAQWFADLGVKGSGGTAIFSMSGHVE
                     KPGNYELPLGIPFPELLAIAGGVRGGRKLKAVIPGGSSCPVVPADKMMTLTMDFDTVK
                     AAGSGLGTCATIVMDETTCMVKTLRRLARFYHAESCGQCTPCREGTGWLHRVLTRIID
                     GNGTKADIDMLVDVANKIEGHTICALGDAAAWPVQSFIKHFRHEFEYMVEHKGRSIVD
                     DVPSVAA"
BASE COUNT          335 a          720 c          701 g          399 t
ORIGIN      
        1 tcaggattcc gacggccgcg gacagtccat cctgccaacc gacctcgacc cagctcgcgc
       61 catgcttgac gcgcggcttc agcaagcgct cggcgctata gatggcgtga cagctgaagc
      121 gatcgcgatc cgagatccac gcctcgttga tcgcctcgtt gtcgcgcggc acgacgcgcc
      181 gcagcttgcc gcgcagcacg tgcgcgtaga ggttgctgcc ggcgcagtcg tgcgggctca
      241 cgagcggctt cgcgaccatt tcccaggcgc gcgcgctgta gcggtacggc ttgttgttca
      301 gcgcaccgac cgggcaaaga tcgatgatgt tgccggagag ctcgtgatcg acgctctttt
      361 ctatatacgt accgatctcg gagcggtcgc tgcggaaatt gaccccaagc tcctggatgc
      421 cggcgatctc ctggccgaaa cggacgcacc gtgtgcaatg gatgcagcgc gtcatgtcgg
      481 tcgaaaccag cgggcccaag ctcttgtctt tgacgatgcg ctttttctcg gtgtagcgag
      541 aaacgccgcg gccgaagccc atcgcgaggt cttgcaactc gcactcgccg ccctgatcgc
      601 agatcgggca gtcgagcggg tgattgatca gcaggaactc catcgtggcc ttctgcgccg
      661 agagcgcgcg cttcgaccgc gtgaaaatct tcatgccctc ggcgaccggc gtcgcgcagg
      721 ccggcagcgg cttcggcgct ttctcgacct cgaccaagca catgcggcag ttcgccgcga
      781 tcgagagctt cgggtggtag cagaaccgcg gcacgtagat gtccgcgcgg tccgtgacct
      841 cgatgatcat ctgccctttg cgcgccttca gcggcacgcc gttgacctcg acgttgacca
      901 cgttcgggtc ggcaggtggt gctgcgggcg gcggcgcggt gggtgccgga gtgctcatgc
      961 ggcaaccgac ggcacgtcgt cgacgatgct tctgcccttg tgctcgacca tgtactcgaa
     1021 ctcgtggcgg aagtgcttga tgaagctctg cacgggccac gcggccgcat cgcctagcgc
     1081 gcaaatcgtg tggccctcga tcttgttggc cacgtcgacg agcatgtcga tgtcggcctt
     1141 cgtcccgttg ccgtcgatga tccgtgtcaa cacgcgatgc agccagcccg tgccctcgcg
     1201 gcacggcgtg cactggccgc acgactcggc gtggtagaaa cgcgcgagcc ggcgcagcgt
     1261 cttcaccatg cacgtagtct cgtccatcac gatggtggcg caggtgccca atcccgagcc
     1321 ggccgccttg acggtgtcga agtccatcgt cagcgtcatc atcttgtcgg ccggcacgac
     1381 cgggcacgac gagccacccg ggatcacggc cttgagcttg cggccgccgc gcacgccgcc
     1441 cgcgatcgcg agcagctccg ggaatggaat tccgagcggc agctcgtagt tgccgggctt
     1501 ctcgacgtgg cccgacatcg aaaagatcgc ggtgccaccc gagcccttta cgccgaggtc
     1561 cgcgaaccac tgcgcgccct tgcgtaggat cgtcggcagc gacgccacgc tctgcgtgtt
     1621 gttgatcgtg gtcggcgcgc cgtacaggcc gaagttcgcc gggaacggcg gcttgaagcg
     1681 cggcttgccc tgcttgccct cgagcgactc gagcagcgcc gtttcctcgc cgcagatgta
     1741 ggcgccggcg ccgacgaacg tatagatgtc ttggtcgatg ccggagcccc ggatgttctt
     1801 gccgagcagc ccggccgcat acgcttcctt gagcgcggcc tcgaagcgcg ggatcggctc
     1861 ggccatgaac tcgccgcgga tgtagttgta ggcgacggtc gcgccgatcg catagctctc
     1921 gagcgctagc ccctcgacga gcgcgtgcgg gttgtaacgc aggatgtcgc ggtcgtgaca
     1981 cgtgccgggc tcgctctcgt ccgagttgca gaccaagtat ttctgcatcg gcgcgttgcg
     2041 cggcatgaag ctcatcttca cgcccgtcgg aaagcccgcg ccgccgcggc cgcggatgcc
     2101 ggatttcttc acctcgtcga tgatcgcgtc gcgcgtcagc tcgccgcgca gcacc
//
LOCUS       DATCUD010000465         1901 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_89908, whole genome shotgun sequence.
ACCESSION   DATCUD010000465 DATCUD010000000
VERSION     DATCUD010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1901)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1901)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1901
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89908"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..330
                     /locus_tag="VIQ99_06890"
     CDS             <1..330
                     /locus_tag="VIQ99_06890"
                     /inference="COORDINATES: protein motif:HMM:NF025168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing protein"
                     /protein_id="HEY9182907.1"
                     /translation="MVSDPRTWTTLAYFILMMPLGTAYFTIAVTGVSTGLGLTVAPFF
                     RLWEWLGDPDWMGEIQLGPSWLENPVGYAACGILGVLLLTGMMHLARGVGRMHARMAK
                     SLLVTPA"
     gene            347..1873
                     /locus_tag="VIQ99_06895"
     CDS             347..1873
                     /locus_tag="VIQ99_06895"
                     /inference="COORDINATES: protein motif:HMM:NF015368.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182908.1"
                     /translation="MIDLVLIATLVIAVLATAMRRPRAYRSLRWLTLGVCGAQLAIEG
                     PRIELVPAYFVAVVIAVLALIDTLKNGLGFPEASSTRPARSRVVTFLRWITAGAATVL
                     LSSSLVLCVALDSLDYPTPSGPYAVGTTELHLIDVSRAESFTESDHDHREISVRVSYP
                     ATNDAAFAALSPDTVPSIAALVVGGFWPNPVTTSWGAIPTHARRGPSLAAAQRRYPVL
                     IFSHAMGGYPEQNTALVEHLVSHGYVVMAVNHPYLSARFRFADGSMIGLEFLLRPNPF
                     PDDAQRSLKEDALGAKLADPGISTAERVALVRQRAAINLRSTDRWAGIHQVMSDDQRF
                     VLDSLAVWPADSLLAGRLDLDRVGVFGMSSGGTATHMTCAADSRCRAGLNLDGFQPLL
                     IDLPPLRAPFMHMSRATVFTNAIAQEQSLALSYIVRVEGAEHLSFTDNVLTLHRFKYL
                     GELGNALGTIDPERMVQLVNDYALAFFDESLLGRRDSMLEGSAQRYPEASIESKHGVD
                     "
BASE COUNT          298 a          600 c          618 g          385 t
ORIGIN      
        1 atggtcagcg acccacgcac gtggactacg ctcgcctatt tcattctgat gatgccgctc
       61 ggcacggcgt acttcacgat tgcggtgacc ggcgtgtcga cagggctcgg ccttaccgtc
      121 gcgccgttct tcaggctgtg ggaatggctc ggcgatccgg attggatggg cgagatccag
      181 ctgggtccga gctggctcga gaaccccgtc ggctatgcgg catgcggaat cctcggcgtt
      241 cttctgctga ccggcatgat gcatctcgcg cgcggcgtgg ggcgcatgca cgcccgcatg
      301 gctaaatcac tgctcgtgac gccggcgtag cgcgctctgt ttagccatga tcgatctcgt
      361 gctgattgcg acactcgtga ttgcggtgct cgcgacggcg atgcgaaggc cgcgagcgta
      421 tcgctcgttg cgatggctca cgctcggcgt gtgcggagcc cagctcgcga tcgaaggccc
      481 gcgcatcgag ctcgtgcccg cctatttcgt ggcggtcgtg atcgctgtgc tcgcactgat
      541 cgacacactg aagaacggcc tcggcttccc cgaggcgagc tccactcggc ccgcgcggtc
      601 acgcgtcgtg acattcctgc gctggatcac tgcgggcgcc gcaacggtgc tgttgtcgtc
      661 gtcgttggtc ttgtgcgtag cgttggacag cctcgactac ccgacgccga gcggtccgta
      721 tgcggtcggg accaccgagc ttcacttgat cgacgtctcg cgcgccgagt cgtttacgga
      781 atccgatcac gaccatcgcg agatttcagt tcgcgtgtcg tacccggcca cgaacgacgc
      841 cgcgttcgcg gccctttcgc cggacacggt tccaagcatc gcggcactcg tcgtgggtgg
      901 gttctggccg aatccggtca caacatcgtg gggcgcaata ccgacgcacg cgagacgcgg
      961 cccgtccctc gcggcggcgc agcggcgtta tcccgtgttg attttttcgc atgcgatggg
     1021 cgggtatccc gagcagaaca cggcgttggt cgagcacttg gtcagtcacg gctacgtggt
     1081 gatggccgtg aatcaccctt acttgagcgc ccgtttccgg tttgcggacg gctcgatgat
     1141 cgggctcgag ttccttctta ggcccaatcc gtttccggac gacgcgcagc ggagtctcaa
     1201 ggaggatgcg ctaggggcca agctcgcaga tccgggcatc tcgacagccg agcgcgtcgc
     1261 gttggtccgg caacgcgcgg ccatcaatct gcggtcaacc gaccgttggg ccggcatcca
     1321 tcaggtgatg tccgacgatc agcgtttcgt actcgacagc ttggcggtgt ggcccgccga
     1381 ctcgctgctg gctgggcgac tcgaccttga ccgcgtcggg gtcttcggga tgtcgtccgg
     1441 cggcacggcg acgcacatga cctgcgcagc ggactcgcgg tgccgtgctg gcctaaactt
     1501 ggatggcttt caaccgctgc tgatcgacct gccgccgcta agagcgccgt tcatgcacat
     1561 gagccgcgcg accgtattca cgaacgcgat cgcgcaggaa cagtcgctgg ctctgagcta
     1621 catcgtgcgc gtcgaaggcg ccgagcacct gagcttcacc gacaacgtgt tgacgttgca
     1681 ccgatttaaa tacctcggtg agctcggcaa cgccttggga acgatcgatc cagagcgcat
     1741 ggttcagctc gtgaacgact acgcgctcgc gttcttcgac gagagcctgt tggggcgccg
     1801 tgattcgatg ctcgagggtt ctgcgcagcg ctatccggaa gcgagtatcg agtcgaaaca
     1861 cggggttgat tgaccccgcg cgcgtctccg cgcctcgaga g
//
LOCUS       DATCUD010000466         1984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103891, whole genome shotgun sequence.
ACCESSION   DATCUD010000466 DATCUD010000000
VERSION     DATCUD010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103891"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..665
                     /locus_tag="VIQ99_06900"
     CDS             171..665
                     /locus_tag="VIQ99_06900"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006726931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEY9182909.1"
                     /translation="MADRPYNVLFLCTGNSARSILAECVLNQLGKGRFKAHSAGSFPK
                     GEIHPYALDLLERQSYPTKHLRSKSWNEFAGPDAAPLDFVFTVCDNAAGEVCPIWPGQ
                     PMTAHWGLPDPAAVEGSEAVRRLAFADTLRMLRNRIGVFVNLPIESLDKLSLQNRLRE
                     IGRT"
     gene            complement(690..1106)
                     /locus_tag="VIQ99_06905"
     CDS             complement(690..1106)
                     /locus_tag="VIQ99_06905"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY9182910.1"
                     /translation="MANKKISGSCLCGGLRFETTATPLFQGFCQCSDCRKVGSGHYAA
                     IGFPRDAVKISGKSTKFGKQGDSGKTIYRNFCPTCGGMVFDLMDVMPDVMIVNGALLD
                     DPSLFKPESVIFTRSAVAWDHVDPKLPKFEAMPPAG"
     gene            1215..>1984
                     /locus_tag="VIQ99_06910"
     CDS             1215..>1984
                     /locus_tag="VIQ99_06910"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9182911.1"
                     /translation="MDKRSLGNSSLAITPLMLGGNVFGWTADEATSFAILDAFVAQGG
                     NAIDTADGYSYWVPGNQGGESETVIGKWLKRRRKRDDVVIGTKVGWWDKRKGLKRQNI
                     IDGCEDSLRRLGIGTIDLYWLHRDDDQTQPDEYLGALDTLVKAGKVRAVGASNFGVER
                     FGAALAESKRSRKIAFCAQQPEYNLLSRGIEADLVPLCVRENVAVLPYYGLASGFLTG
                     KYRSAADAAKSPRGAGAVKHLKGKGPAVLAALDAVAAR"
BASE COUNT          354 a          635 c          647 g          348 t
ORIGIN      
        1 tgttgctgac tgaaaccgcc gagtcatttt ttcaccgtct tggttacgta gtcctcgagc
       61 gcgatcgcgc accggccgct gtcgcttcga gcgcggaatt tcgcaggctg tgccccgcta
      121 cggccgtgtg catgacgaag ctcttgcctc cggcgtccta gccttaagac atggccgatc
      181 gaccctacaa cgtcctgttc ctgtgcacgg gcaactccgc tcgcagcatt ttggcggagt
      241 gcgtgttgaa tcaactgggc aaaggaaggt tcaaagccca cagcgcgggc agtttcccga
      301 agggtgagat acatccttac gcactcgatc tactggagcg gcagagctac ccgacgaagc
      361 acctgaggtc caagagctgg aacgaattcg ccggcccgga tgcggcgccg ctcgacttcg
      421 tgtttaccgt ctgtgacaac gcggcgggcg aggtctgtcc gatttggccg ggtcagccca
      481 tgaccgcgca ctgggggttg cccgatccgg cagccgtgga gggcagcgaa gcagtgcgcc
      541 gcctcgcgtt cgccgatacg ctccgcatgc tgcgcaatcg catcggcgtg ttcgtgaacc
      601 tgccgatcga atcgctggac aagctcagct tgcagaatcg gctccgcgag atcggtcgca
      661 cctgacggtg cggcgagaca tcgcaggcgt caccccgccg gcggcatcgc ctcgaacttc
      721 ggcagcttcg gatcgacgtg atcccacgcc acggcgctgc gcgtgaagat cacgctctcg
      781 ggcttgaaca gcgaggggtc gtccagcaac gcgccgttca cgatcatcac gtccggcatc
      841 acgtccatga gatcgaacac catgccgccg caggtcggac agaaatttcg atagatcgtc
      901 ttgccgctgt cgccctgctt gccgaattta gtgctcttgc cgctgatctt cacggcgtca
      961 cgcggaaagc cgatcgccgc gtagtgcccc gagccgacct tgcggcaatc ggagcattgg
     1021 cagaatcctt gaaacagcgg cgtagccgtc gtctcgaatc gcaacccacc gcacaagcac
     1081 gagccggaaa tcttcttgtt ggccatgttt gctctccccg aggtcggccg atgttggcac
     1141 gaccgccgcg cgcggtgaag cgttacggcg ccacggtccc gcgtgctagg ctccgatgac
     1201 acggaaggca ctgcttggac aaacgctcgc tcggcaattc ctcgctcgcg atcacgccgc
     1261 tgatgctcgg cggcaacgtg ttcggctgga cggccgacga ggccacctcg ttcgcgatcc
     1321 tcgacgcgtt cgtcgcgcag ggcggcaacg cgatcgacac ggccgatggc tactcgtatt
     1381 gggtgccggg gaatcagggc ggcgagagcg agacggtgat cggcaagtgg ctgaagcggc
     1441 gccgcaagcg cgacgacgtc gtgatcggca cgaaggtcgg ctggtgggac aagcgcaagg
     1501 ggctgaagcg ccagaacatc atcgacggct gcgaagactc gctgcggcgg cttggaatcg
     1561 gcacgatcga tctctattgg ctgcatcgcg acgacgacca gacgcaaccg gatgaatatc
     1621 tcggcgcgct cgacacgctc gtgaaggccg gcaaggtccg cgccgtcgga gcatcgaact
     1681 tcggcgtcga gcgcttcggc gccgcgctcg cggagagcaa gcgttcgagg aagatcgcgt
     1741 tctgcgcgca gcagcccgag tacaacctgc tcagtcgagg tatcgaggcc gatctcgtgc
     1801 cgctgtgcgt gcgcgagaac gtcgcggtcc tgccttacta cgggctcgcg agcggtttcc
     1861 tgaccggcaa gtatcgtagc gccgcggacg cggccaagag cccgcgcggc gccggcgccg
     1921 tgaagcactt gaagggcaag gggcccgcgg tgctcgcggc gctcgatgcg gtcgcggccc
     1981 ggca
//
LOCUS       DATCUD010000467         2043 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_89927, whole genome shotgun sequence.
ACCESSION   DATCUD010000467 DATCUD010000000
VERSION     DATCUD010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89927"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1099)
                     /locus_tag="VIQ99_06915"
     CDS             complement(<1..1099)
                     /locus_tag="VIQ99_06915"
                     /inference="COORDINATES: protein motif:HMM:TIGR01499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HEY9182912.1"
                     /translation="MTTAPRRGYTLDRWLAWFETLHPKRIDLSLDRLTAVLDELELRR
                     PPFEVITVAGTNGKGSCVAMLESIYWHAGYDVGTFTSPHLWRFNERIRVNGVDASDRD
                     LVTVFEHVDTALGAITLSYFEASFVAALEHFRRHEPDVVVLEVGMGGRLDATNTVDTD
                     CALIVSVDLDHREWLGDTREAIGREKAGIVRRGKPAVIGDRAVPRSVLEHVAAEGATP
                     HVIGRDFDFVKVGAGWRRTRDHATAPTLPLPPFGGEEQLGNAAACAAVVDCLAASLPV
                     SDSALAAGIAHAYLRGRLERVDLDGVEWVFDVAHNPAAAAQLAASVGRLPRARRTWVV
                     FAAMRDKDLAGAVQPFVASADGWFVAQASADR"
     gene            complement(1117..1977)
                     /gene="accD"
                     /locus_tag="VIQ99_06920"
     CDS             complement(1117..1977)
                     /gene="accD"
                     /locus_tag="VIQ99_06920"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEY9182913.1"
                     /translation="MSWFDKLMPSRIRTEKRKHSVPEGLWVKCAGCSAQLYRAELNRN
                     LHVCPKCGHHLRIGARERLEMFLDPESGYELAANLEPLDPLRFKDTKRYRERLSLAQR
                     ETDERDALVVMAGTLKSMPVVAAAFEFRFISGSMGSVVGERFVRGVAYCIQHRRPLVC
                     FSASGGARMQEALYSLLQMAKTASALAQLAANKLPYVSVMTDPTTGGVSASLAMLGDV
                     NIAEPGALICFAGPRVIEQTTGETLPEGFQRAEFLLEKGAIDMILDRRQARDQIAALL
                     AKLCSRPALS"
BASE COUNT          350 a          733 c          657 g          303 t
ORIGIN      
        1 cgcgatccgc gctcgcctgc gcgacgaacc agccgtccgc gctcgcgacg aaaggctgca
       61 cggctccggc gagatccttg tcgcgcatcg cagcgaacac gacccacgtc cgccgagcgc
      121 gcggcagccg gccgaccgac gcggccagct gtgcggccgc ggccgggtta tgcgcgacgt
      181 cgaagaccca ctccactcca tcgaggtcca cgcgctcgag ccgcccgcgc agatacgcgt
      241 gggcgatgcc ggccgcgagc gccgagtccg agaccggcag cgacgcggcg aggcaatcga
      301 cgacggcagc gcaggccgca gcgttaccga gctgttcctc tccgccgaac ggtggcaacg
      361 gcagcgtcgg cgccgtggcg tggtcgcgcg tgcggcgcca gcccgcgcct accttgacga
      421 aatcgaagtc ccgcccgatc acgtgcggcg tcgcgccctc ggcggcgaca tgttccagca
      481 cgctccgcgg caccgcgcga tcgccgatca ccgccggctt gccgcgccgc acgattccgg
      541 ccttctcgcg gccgatcgcc tcgcgcgtgt ccccgagcca ttcgcggtga tcgagatcga
      601 cgctgacgat caacgcgcag tccgtgtcaa cggtgttcgt cgcgtcgagg cgtcctccca
      661 tgccgacctc gagaacgacc acgtccggct catgccgcct gaagtgctcg agcgccgcga
      721 cgaacgaggc ttcgaaatac gacaacgtga tcgccccgag cgcggtgtcg acgtgctcga
      781 acaccgtgac gaggtcccgg tccgatgcgt cgacgccgtt gacgcggatc cgctcgttga
      841 accgccacag atgcggcgag gtgaacgttc cgacgtcgta gccggcatgc caatagatgc
      901 tctcgagcat cgcgacgcac gagccctttc cgttcgtgcc cgcgaccgtg atgacctcga
      961 acggcggccg ccgcagctcg agctcgtcga gcacggccgt gagccgatcg aggctcaagt
     1021 cgatgcgttt cggatgcagc gtctcgaacc acgcgagcca acgatcgagc gtgtaaccgc
     1081 gccgcggggc agtcgtcacc ggcgggcctc taggactcag gacagcgccg gcctggagca
     1141 gagcttcgcg agcagcgcgg cgatctgatc gcgcgcctga cgacgatcca gaatcatgtc
     1201 gatggcgcct ttttcgagca ggaactcggc ccgctggaac ccttcgggca gcgtctcgcc
     1261 ggtggtctgc tcgatcactc gcggcccggc gaagcagatc agcgcgccgg gctccgcgat
     1321 gttgacgtca ccgagcatcg cgaggctcgc ggacacgccg cccgtcgtcg gatcggtcat
     1381 cacggacacg tacggcagct tgttggccgc gagctgcgcc aacgccgagg cggtcttcgc
     1441 catttgcagc aacgagtaca acgcttcctg catgcgtgcc ccgccactcg ccgagaagca
     1501 gacgagcgga cggcggtgct gaatgcaata cgcgacgccc cgcacgaaac gctcgccgac
     1561 gacggagccc atggagcccg agatgaaccg aaactcgaat gcggcggcca cgaccggcat
     1621 gctcttcagc gtgcccgcca tgaccacgag cgcatcgcgc tcgtcggtct cgcgctgcgc
     1681 gagactcagg cgctcgcgat agcgcttcgt gtccttgaag cgcagcggat ccagaggctc
     1741 gagattcgcc gcgagctcgt agccggactc gggatcgagg aacatctcga gacgctcgcg
     1801 ggcgccgata cgcagatggt gcccgcactt cggacacacg tggaggttgc gattcagctc
     1861 ggcgcggtac agctgcgcgg agcaacccgc gcatttcacc cacaggccct ccggcaccga
     1921 gtgcttacgc ttctcggtcc ggatgcgcga cggcatcaat ttatcgaacc aactcatacg
     1981 ctcacgctga cttcacgacc cgcatgatag ccgaaccccc cttccgtgat catggctcgt
     2041 cgg
//
LOCUS       DATCUD010000468         3455 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103904, whole genome shotgun sequence.
ACCESSION   DATCUD010000468 DATCUD010000000
VERSION     DATCUD010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3455)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3455)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3455
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103904"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1963
                     /locus_tag="VIQ99_06925"
     CDS             <1..1963
                     /locus_tag="VIQ99_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002651037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEY9182914.1"
                     /translation="EPVEAIVKRFCTGAMSYGSISLEAHQTLAIAMNRIGGKSNTGEG
                     GEDPARFVPLPNGDSRRSAIKQIASGRFGVTTWYLANADELQIKMAQGAKPGEGGELP
                     GKKVDDNIARIRHSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNSNPSARISVKLVSE
                     VGVGTIAAGVVKAHADHVLISGDNGGTGASPLTSIKHAGLPWELGLAETHQTLVLNDL
                     RSRAVLQTDGGLKTGRDVVIAALLGAEEMGFSTAPLIAMGCIMMRKCHLNTCPVGVAT
                     QDPVLRKKFAGQPEHVVNYLFMVAEEAREIMASLGIRRFIDLVGRTDLLKTAAAINHW
                     KADGLDLTPLLAPAVKPHPDTQVYCTKWQDHGLDRALDNKLIALARKSISQRKKTREE
                     LPISNINRTVGAMLSYEVVKKWGADALSYDTVRFKFTGTAGQSFGAFLAKGITLELEG
                     DSNDYVGKGLSGGRLIMYPPKNATFKAEENVLIGNVALYGATSGRAFFRGRAAERFCV
                     RNSGAKAVVEGVGDHGCEYMTGGRAVILGPTGRNFAAGMSGGIAYVWDPHHDFEPRCN
                     TGTVDLEAVAEDEDIVELREMIELHRDYTGSPVAAKILDDWPTALKQFVKVMPTDYKR
                     VLAERKRHDEEMEQKLSNDETGTFVAQAR"
     gene            1990..>3455
                     /locus_tag="VIQ99_06930"
     CDS             1990..>3455
                     /locus_tag="VIQ99_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008661229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEY9182915.1"
                     /translation="MGKPTGFMEYPKKSVPYRDARERLNDFGEIFTPGSEDHLRNQGA
                     RCMDCGVPFCQSDNGCPIDNLIPEWNDLVYEGRWREALDRLHKTNNFPEFTGRTCPAP
                     CEGACVLGITDPPVTIKNIENAIIDRGFAEGWVRPNVPHSRSGKRVAIVGSGPAGLAA
                     ADQLNKAGHQVTVYERADRVGGLLTYGIPNMKLDKGVVKRRVDLLHAAGIEFVVNADV
                     GKNVDPNKLRAEHDALLLATGATVPRDLKIPGRELEGIHFAMDFLTANTKSLLASNLA
                     DGKFISALDKRVVVIGGGDTGADCIGTALRHGCKSLINLELLDQSPAKRALDNPWPLW
                     PKIHRSDYAHEEAIARFGADPRNYAVVSKEFSGSDGHVTSVRINRVRWDQVDGAMKMT
                     DVDGSSETLEADLVLLAMGFLGPEAYLAQALGLELDPRSNYRAAHGKFATSLPGVFAA
                     GDCRRGQSLVVWAINEGRGAARAVDEFLMGESQLPAPKL"
BASE COUNT          668 a         1095 c         1161 g          531 t
ORIGIN      
        1 ggagccggtg gaggcgatcg tgaagcgctt ctgcacgggc gcgatgagct acggctcgat
       61 ctcgctcgaa gcgcaccaga cgctggcgat cgcgatgaac cgcatcggcg gcaagagcaa
      121 caccggagag ggcggtgagg atcccgcgcg tttcgtgccg ctgccgaacg gcgactcgcg
      181 ccgttccgcg atcaagcaga tcgcatcggg ccgcttcggc gtcacgacgt ggtatctcgc
      241 gaacgccgac gagctccaga tcaagatggc gcagggcgcg aagccgggcg aaggcggcga
      301 gctacccggc aagaaggtcg acgacaacat cgcgcggatt cgccactcga ctccgggggt
      361 cggcctgatc agcccaccgc ctcaccacga catctactcg atcgaggacc tcgcgcagct
      421 gatccacgac ctcaaaaact cgaacccctc ggcgcgaatc agcgtgaagc tcgtgtccga
      481 ggtcggagtc ggcacgatcg ccgcgggcgt cgtgaaagcg cacgcggatc acgttctgat
      541 ctccggcgac aacggcggca cgggcgcgtc gccgctcacg agcatcaagc acgcggggct
      601 gccgtgggag cttgggctgg ccgagactca ccaaacgctg gtcttgaacg acttgcgtag
      661 ccgtgcagtg ctacagacgg acgggggact caagaccggc cgcgacgtcg tgatcgcagc
      721 gttgctcggc gccgaggaga tgggcttctc gacggcgccg ttgatcgcga tgggctgcat
      781 catgatgcgc aagtgccact tgaacacgtg cccggtcggc gtcgccacgc aggacccggt
      841 gctgcgcaag aagttcgcgg gtcagcccga gcacgtcgtg aactatctgt tcatggtggc
      901 cgaggaagcc cgcgagatca tggcgtcgct cgggattcgc cgcttcatcg atctggtcgg
      961 ccgcacggat ctgctgaaga ccgccgccgc catcaaccat tggaaggcgg acgggctgga
     1021 tttgaccccg ctgttggcgc cggccgtgaa gccgcacccc gacactcagg tctactgcac
     1081 gaaatggcag gaccacggcc tcgatcgcgc gctcgacaac aagctgatcg cgctcgcgcg
     1141 gaagtcgatt tcgcagcgca agaagactcg ggaagagctg ccgatctcga acatcaaccg
     1201 cacggtcggc gcaatgctga gctacgaggt cgtcaagaag tggggagcgg acgccctgtc
     1261 ctacgacacg gtgcgcttca agttcacggg caccgcaggt cagagcttcg gcgcgttctt
     1321 ggcgaagggc atcacgctcg agctcgaggg cgacagcaac gactacgtcg gcaagggcct
     1381 ctctggcggc cggctgatta tgtatccgcc gaagaatgcg acgttcaagg ccgaggagaa
     1441 cgtgctgatc ggcaacgtgg cgctgtacgg cgcgacgagc ggtcgcgcgt tcttccgcgg
     1501 tcgcgcggcg gaacgcttct gcgtccgtaa cagcggcgcg aaggccgtcg tcgaaggcgt
     1561 gggcgaccac ggctgcgaat acatgacggg cgggcgcgcc gtgatcttgg gaccgacggg
     1621 ccgcaacttc gcggccggca tgtcgggcgg cattgcgtac gtctgggatc cgcaccacga
     1681 cttcgagccg aggtgcaaca cgggcacggt cgatctcgaa gccgtagcag aggacgagga
     1741 catcgtcgag ctgcgcgaga tgatcgagct gcaccgcgat tacacgggct cgccggtcgc
     1801 cgcgaagatc ctcgacgact ggccgacggc gctcaagcaa ttcgtcaagg tcatgccgac
     1861 cgactacaag cgcgtgctcg cagagcgcaa gcggcacgac gaagagatgg aacagaagct
     1921 cagcaacgac gaaacaggta cgttcgtcgc gcaagctcgc tagaacaata acggactgat
     1981 ctcgagctta tgggcaagcc caccggcttc atggagtatc cgaagaagag cgtgccgtat
     2041 cgcgacgcgc gcgagcgcct gaacgacttc ggcgagatct tcacgccggg ttccgaggat
     2101 catctcagga accaaggcgc gcgctgcatg gattgcggcg tgccgttttg tcagtccgat
     2161 aacggttgcc cgatcgacaa cctgatcccc gagtggaacg acctcgtcta cgagggtcga
     2221 tggcgcgaag cgctcgaccg tttgcacaag actaacaact tccccgagtt cacgggccgc
     2281 acgtgtcctg cgccgtgcga gggcgcctgt gtgctcggaa tcacggaccc ccccgtcacg
     2341 atcaagaaca tcgagaatgc gatcatcgac cgcggctttg ccgagggctg ggtcaggccg
     2401 aacgtcccgc attcgcgcag cggcaagcga gtcgccatcg tcggctcggg gccggccggt
     2461 ctcgcagcag ccgaccagct gaacaaggcc ggtcatcaag tgacggtgta tgagcgcgcc
     2521 gatcgcgtcg gcggcctgct cacgtacggc atcccgaaca tgaagctcga caaaggcgtc
     2581 gtgaagcgcc gcgtcgactt gctgcacgcc gcgggcatcg agttcgtcgt gaacgcagac
     2641 gtcggcaaga acgtcgatcc gaacaagctg cgcgccgagc acgatgcgtt gctgctcgcg
     2701 acgggcgcga cggtgccgcg cgatctcaag atcccggggc gtgagctcga gggcatccac
     2761 ttcgcgatgg acttcttgac ggcgaacacg aaaagcctgc tcgcgagcaa cctcgcggac
     2821 ggcaaattca tcagcgcttt ggacaagcgc gtggtcgtga tcggcggcgg cgacacgggt
     2881 gcggactgca tcggcaccgc gctacgccac ggctgcaaga gcttgatcaa cctcgagctg
     2941 ctcgaccaat cgccggcgaa gcgcgcgctc gacaatccgt ggccgctgtg gccgaagatc
     3001 catcgctccg actatgcgca cgaagaagcc atcgcccgct tcggggccga cccacgcaac
     3061 tacgcagtgg tctcgaaaga attctcagga agtgacgggc acgtgacgtc ggttcggatc
     3121 aaccgcgtgc ggtgggatca ggtcgacggc gcgatgaaga tgacggacgt cgacggctcg
     3181 tcggagacgc tcgaagccga tctcgtgctg ctcgcgatgg gcttcttggg tcccgaggcc
     3241 tatctcgcgc aggcgctcgg cctagagctc gatccgcgct cgaactatcg cgccgcgcac
     3301 ggcaaattcg cgacgagcct gcccggagtg ttcgcggccg gcgactgccg ccgcggccaa
     3361 tcgctcgtcg tgtgggcgat caacgagggc cgcggcgcgg cccgcgcggt agacgagttc
     3421 ctgatgggcg agagccagct gccggcgccg aagct
//
LOCUS       DATCUD010000469         4138 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18898, whole genome shotgun sequence.
ACCESSION   DATCUD010000469 DATCUD010000000
VERSION     DATCUD010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4138
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18898"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(235..1578)
                     /locus_tag="VIQ99_06935"
     CDS             complement(235..1578)
                     /locus_tag="VIQ99_06935"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9182916.1"
                     /translation="MFLTKKHLSRRTVLKAAGVSIGLPLLDAMIPAYTALAQTAAAPK
                     LRAGFFYIPHGAIMWNTPYGAAIDAWTPSGAGADFKLSPILSPLETYKRYVTSFGNLE
                     NKAPQGSVHTIVPATWLSGVRPDQKATGAMMAPTIDQMIAEKIGGDSVLPSLEVSSET
                     TTQSAACGSGACYYSSTLSFRNATTPLPMEFNPRKVFVQLFGAGDTPEERATLAHRRA
                     SVLDMINGRTTELKRELGPADQKVLDDYLESVRETERRVAKASQRDLTGIELPDAPIG
                     ELQDFDEQVKLMFDLIHLAYQANITRVASYIMVAEGTNRTYNHIGVPDAFHPLSHHAN
                     NKDRIDKLVRVQTYHVQRFADFIDKLAKTPDGEGSLLDHSLFMYGSNMSNSDRHNNYP
                     LPNILVGGACGALKGGQHVTLPEYTTFSNLHLTVLNKAGLEMKSIGDSTGEIAGA"
     gene            complement(1594..4041)
                     /locus_tag="VIQ99_06940"
     CDS             complement(1594..4041)
                     /locus_tag="VIQ99_06940"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HEY9182917.1"
                     /translation="MISKGLYRWLAPAAVLVVGGAAVVLMTQLDRRREQQRFAVLDRY
                     CTECHNDAEREADLSFESLNLDEVPQHAEQFEAAIVKLRGRLMPPPGNPQPTAREVDG
                     LIATLESSIDEHAPKRAGYVAAQRLSRTEYAHAVKALLDVDIDPKEYLPAEIEIHGFT
                     NIAAALSTSPAFVEQYVNAASAVAHLAVGEPKPKVASAYFPAPGPGTQNTYVPGMPLG
                     TRGGIKFTHTFPADGEYRISIAGDLGAGLYPRAVETRHTLVVLVDRNEQFRADIGGEE
                     DLALINTGGAPARAELMKRFTDIPLQVTAGKHEIIVTFIERSRAADDEQIGGGSGDFS
                     FGGAARVPGITSGINLAGPFNSTGLTKTSSREKLFVCEPEVEARERECAEQIAANLAR
                     RAFRRPVGQADLDRLMPFFEEGRKGPGGFDEGVEVMTAAVLSSPDFLYRAIAPVQTAG
                     ADAQELGAFELASRLSFFLWSQGPDDELLKLAESGEIENERVLEGQVERMLADPRAEV
                     LISGFAEGWLAVDDLDAVQPDMIVFPEFTEGLRQDFAAELRLFLKSVLLGGRNVKELL
                     TADYTFLNERLARHYGIDDVVGPQFRRVDLTDPVRHGILGKGGLLLRTSYGNRTSPVL
                     RGAWVLDKLMGTPPTPPPPGVETNLDTPEGEQPKTVRERLERHRKDASCNACHGVIDP
                     YGLALENFSAIGAWRDYDEDADAPIDPRTELSGARPVDGPVALTAALLERDDQFVQAM
                     TEKLMMYAVGRELEYYDMPQVREVVRAAKRQDYRFSALVLGVVQSDAFRMQAVRREAE
                     SSADQGSAQASLDAAGR"
BASE COUNT          610 a         1415 c         1415 g          698 t
ORIGIN      
        1 gtcgggcgtc acgtcgacgc gctcgaccgt gccgcgctcg agcgcgctct gcgcgcgcgc
       61 cgcgaacggc gcgagcgtcg cgcccacgaa gccggccgca acgccggcgg cgacgcctct
      121 gagcacgtcc cgacgcgtag atgtctcccc cctcgcggtc gtcagggtga cggacgatct
      181 cccaggggag aaggtcacgt ctgaggggcg agggaaatcg cgcacacccg caccctacgc
      241 gcccgcgatc tcgcccgtgc tgtcgccgat gctcttcatc tcgagcccgg ccttgttcaa
      301 gacggtgagg tgcaggttcg agaacgtcgt gtattccggc agcgtgacgt gctggccgcc
      361 cttcagcgcg ccgcacgcgc cgccgaccag gatgttcggc agcggatagt tgttgtgccg
      421 gtcgctgttg ctcatgttcg agccgtacat gaacagcgaa tggtcgagca gcgagccctc
      481 gccgtccggc gtcttggcga gcttgtcgat gaagtccgcg aagcgctgca cgtgatacgt
      541 ctgcacgcga acgagcttgt cgatgcggtc cttgttgttc gcgtggtgcg acaacggatg
      601 gaacgcgtcc ggcacgccga tgtggttgta cgtgcggttc gtgccctcgg cgaccatgat
      661 gtacgacgcg acgcgcgtga tgttggcctg atacgcgagg tggatcaggt cgaacatcag
      721 cttcacctgc tcgtcgaaat cctggagctc gccgatcggt gcgtccggca gctcgatgcc
      781 ggtgaggtcg cgctgcgaag ccttcgcgac gcggcgttcg gtctcgcgca cggactcgag
      841 gtaatcgtcg agcaccttct ggtccgcggg accgagctcg cgcttcaact ccgtcgtgcg
      901 gccgttgatc atgtcgagca cgctcgcgcg gcggtgcgcg agcgtcgcgc gctcctcggg
      961 cgtatcgccc gcgccgaaca gctgcacgaa caccttgcgc gggttgaact ccatcggcag
     1021 cggagtcgtt gcgttcctga acgacaacgt cgagctgtag tagcacgcgc cggagccgca
     1081 cgcggcgctc tgcgtcgtcg tctcggacga cacctcgagc gacggcagca cggagtcgcc
     1141 gccgatcttc tcggcgatca tctggtcgat cgtcggcgcc atcatcgcgc ccgtcgcctt
     1201 ctggtccggc cgcacgcccg agagccacgt ggccggcacg atcgtgtgaa cggagccctg
     1261 cggcgccttg ttctcgaggt tgccgaacga cgtcacgtag cgcttgtacg tctcgagtgg
     1321 cgacaggatc ggcgagagct tgaagtccgc gcccgcgccg ctcggcgtcc acgcgtcgat
     1381 cgcggcgccg tacggcgtgt tccacatgat cgcgccgtgc gggatataga agaatcccgc
     1441 gcgcagcttc ggcgcggcgg cggtctgcgc gagcgccgtg tacgcgggga tcatcgcgtc
     1501 gagcagcggc aggccgatcg acacgccggc ggctttcagg accgtgcgcc gggacagatg
     1561 cttcttcgtc aagaacatgg cgtagccccc tcgttaccgg ccggccgcgt cgagagacgc
     1621 ctgtgccgac ccttgatctg ctgaagattc tgcctcgcgc cgcaccgctt gcatgcgaaa
     1681 cgcgtcgctc tgcacgactc cgagcacgag cgccgagaac cggtaatcct gtcgtttcgc
     1741 ggcgcgcacg acctcgcgga cttgcggcat gtcgtagtac tcgagctcgc ggccgaccgc
     1801 gtacatcatg agcttctcgg tcatggcttg cacgaactgg tcgtcccgct cgagcagcgc
     1861 ggccgtcagc gcgacggggc cgtcgaccgg ccgcgcgccc gacagctccg tgcgcggatc
     1921 gatcggggca tcggcgtcct cgtcgtaatc gcgccaagcg ccgatcgcgg agaaattctc
     1981 gagcgccaac ccgtacggat cgatcacgcc gtgacacgcg ttgcacgaag cgtccttgcg
     2041 gtgccgctcc aggcgctcgc ggaccgtctt cggctgctcg ccttccggcg tgtcgagatt
     2101 cgtctcgacg ccaggcggcg gcggcgtcgg cggagtgccc attagcttgt cgagcaccca
     2161 tgcgccgcgc agcaccggtg acgtgcggtt gccgtatgaa gtgcgcagca acaacccgcc
     2221 cttgccgagg atgccgtgac ggaccgggtc cgtgagatcg acgcgccgga actgcgggcc
     2281 gacgacgtcg tcgataccgt agtgccgtgc gagccgctcg ttcaagaacg tgtagtcggc
     2341 cgtcagcagc tccttcacgt tgcgcccccc gagcagcacg ctcttcagga acaggcgcag
     2401 ctcggccgcg aaatcttggc gcagcccttc ggtgaactcg gggaacacga tcatgtcggg
     2461 ctgcaccgcg tcgagatcgt cgacggcgag ccaaccttcc gcgaagcccg agatcagcac
     2521 ctcggcgcgc gggtccgcga gcatgcgctc gacttgccct tcgagcacgc gctcgttttc
     2581 gatctcgccg ctctcggcga gcttcagcag ctcgtcatcg ggaccttggc tccacaggaa
     2641 gaacgagagc cgcgacgcga gctcgaacgc gccgagctcc tgcgcgtcgg cgccggccgt
     2701 ctgcacgggc gcgatcgcgc gatacaggaa gtccgggctc gacagcacgg cggccgtcat
     2761 gacctcgacg ccttcgtcga agccgccggg gcccttgcgg ccctcctcga agaacggcat
     2821 caggcgatcg agatcggcct ggcccacggg ccgccggaac gcgcgccgcg cgaggttcgc
     2881 cgcgatttgc tccgcgcact cgcgctcgcg cgcctcgacc tcgggctcgc agacgaacag
     2941 cttctcgcgg ctcgacgtct tcgtgaggcc ggtcgagttg aacgggcccg ccaggttgat
     3001 gccgctcgtg atgccgggca cgcgcgcggc gccgccgaac gagaagtccc cggagccgcc
     3061 gccgatctgc tcgtcgtcgg cggcacgcga gcgctcgatg aacgtgacga tgatctcgtg
     3121 cttgccggcc gtgacttgca gcgggatatc ggtgaagcgc ttcatgagct ccgcgcgcgc
     3181 cggcgcgccg cccgtattga tcagcgcgag atcctcttcg ccgccgatgt cggcgcggaa
     3241 ctgctcgttg cgatcgacga gcacgacgag cgtgtgccgg gtttcgaccg cacgcgggta
     3301 caggccggcg ccgaggtcgc cggcgatcga gatccggtac tcgccgtcgg ccgggaacgt
     3361 gtgcgtgaac ttgatgccgc cgcgcgtgcc gagcggcata ccgggcacgt aggtgttctg
     3421 ggtgccgggg cccggcgccg ggaaatacgc gctcgcgact ttcggcttcg gctcgccgac
     3481 cgcgagatgc gcgacggcgc tcgccgcgtt cacgtactgc tcgacgaacg ccggcgacgt
     3541 gctcaaagcg gccgcgatgt tcgtgaagcc gtgaatctcg atctcggccg gcaggtattc
     3601 cttcgggtcg atgtcgacgt cgagcagcgc cttcacggca tgcgcgtact cggttcggct
     3661 caggcgttgc gcggctacgt agcccgcacg cttcggggcg tgctcgtcga tcgagctctc
     3721 gagcgtcgcg atcaagccgt cgacctctct ggccgtcggc tgcgggttgc cgggcggcgg
     3781 catcagccgg ccgcgcagct tcacgatcgc ggcctcgaat tgctccgcgt gctgcggcac
     3841 ctcgtcgagg ttcaggctct cgaacgacag gtcggcctcg cgctcggcgt cgttgtggca
     3901 ctcggtgcaa tagcggtcga gcacggcgaa gcgctgctgc tcgcggcgtc gatcgagctg
     3961 cgtcatgagg accacggccg cgccgccgac cacgagaacg gccgcggggg ccagccagcg
     4021 atagagcccc ttcgaaatca tccgcctatt gttgcccaga agcggggcgg ccgaaatcca
     4081 agaatccttt gcggatcgtc gaccgcgggc cgcggcgggt caggggccga gcgcggtt
//
LOCUS       DATCUD010000470         2064 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18907, whole genome shotgun sequence.
ACCESSION   DATCUD010000470 DATCUD010000000
VERSION     DATCUD010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2064
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18907"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="VIQ99_06945"
     CDS             <1..504
                     /locus_tag="VIQ99_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012079164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEY9182918.1"
                     /translation="IPRRADRWFRRLQLVSSAAYSLGHGGNDAQKTMGIIWLLLIANG
                     VTTEDHLPGWVVVSCFLAIGLGTMFGGWRIVKTMGQRITKLKPVGGFAAETAGSITLF
                     LATYFGIPVSTTHTITGAIVGVGAAKGSAAVRWGVAGNIVIAWIITIPASAAIAGLAW
                     WIGDLFF"
     gene            complement(520..1584)
                     /locus_tag="VIQ99_06950"
     CDS             complement(520..1584)
                     /locus_tag="VIQ99_06950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182919.1"
                     /translation="MKHLVATLILSALAAPVSAQWLTLKTPGIPRTADGNPDLSAPAP
                     KAGDGHPDLSGLSRGAGVRGDLREESKIQPWALAAMAEHESNYYRDGPHMQCLPQGPA
                     YLGGAGGGGGGMRRFVQSPGVIAVLHSDGTYRQIFTDGRALEQDPLPIFQGYSVGRWD
                     GDTLVVTSNGYNAKTWLHPEGLGHTEQLRITERYRRIDFGHLQVDITFEDPGTFEAPL
                     HAVVSLEYAADDEMLELVCNEASEGGTKHWVGDKTADARATAVSVAPEILAKYVGTYR
                     GIWLEFPTTVVVTLENGTLFLSRNGSAKNALLPQSDTTFVCSTCQWGQPYIFSREGDG
                     MATEVREVQVSGAWIFKRVP"
     gene            1688..>2064
                     /locus_tag="VIQ99_06955"
     CDS             1688..>2064
                     /locus_tag="VIQ99_06955"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182920.1"
                     /translation="MKRAPLVLIGAAWCLASVSAAAHHAFAAEFDINKPVQLTGTVTK
                     IEWTNPHAWLFIDAKDDSGAVHNWAIELVGINDLLRLGWGRDRVKAGDTISVVGFGAR
                     NGTNTANAASVTLASTGELLWESA"
BASE COUNT          338 a          677 c          684 g          365 t
ORIGIN      
        1 attccgcgcc gcgccgatcg atggttccgg cgtctgcagc tcgtgtcgtc ggcggcatac
       61 agcttgggcc acggcggtaa cgacgcgcaa aagacgatgg gcatcatctg gctattgctg
      121 atcgcgaacg gcgtgactac ggaggatcac ctgcccggct gggtcgtggt cagctgcttc
      181 ctcgcgatcg gcctcggcac gatgttcggc ggttggcgca tcgtgaagac gatgggccaa
      241 cggatcacga agctgaaacc ggtcggcgga ttcgcggccg agactgccgg atcgatcacg
      301 ctgttcttgg cgacttattt cggcatcccg gtgtcgacga cgcacacgat cacgggcgcg
      361 atcgtaggtg tcggcgccgc caaagggtcc gcggcagtcc gctggggcgt tgccggcaac
      421 atcgtgatcg catggatcat cacgatcccg gcgtccgcgg cgattgccgg gctcgcttgg
      481 tggatcggcg acttgttctt ttgacgacga gcgcagcgat tagggcacgc gcttgaagat
      541 ccaagcgccc gacacctgca cctcgcgcac ctcggtcgcc atgccgtcgc cttcgcggct
      601 gaagatgtac ggctgacccc actggcacgt gctgcacacg aacgtcgtgt ccgactgcgg
      661 gagcagcgcg ttctttgcgc tgccgttccg gctcaagaaa agcgtgccgt tctcgagcgt
      721 gacgacgacc gtggtcggga actccagcca aatgccgcga tacgtgccga cgtacttcgc
      781 gaggatttcc ggcgccacgc tgacggccgt cgcgcgagcg tccgcggtct tgtcgccgac
      841 ccaatgcttc gtgccgccct cgctcgcttc gttgcagacg agctcgagca tctcgtcgtc
      901 ggctgcgtac tcgagggaga cgacggcgtg cagcggcgcc tcgaacgtgc cgggatcctc
      961 gaatgtgatg tccacctgca ggtgtccgaa gtcgatgcgt cgataacgct ccgtgatccg
     1021 cagctgctcc gtgtgcccca acccttccgg gtgcagccag gtcttggcgt tgtagccgtt
     1081 gctcgtcacc acgagcgtgt cgccgtccca gcggccgacc gagtagccct gaaagatcgg
     1141 cagcggatcc tgctcgagcg cgcggccgtc cgtgaagatc tgccgatacg tcccgtccga
     1201 gtgcagcacc gcgatcaccc cggggctctg cacgaaccgc cgcatgccac ccccgccgcc
     1261 accggcaccg ccgagatagg ccgggccttg cggcaggcac tgcatgtgcg gaccgtcgcg
     1321 gtagtaatta ctctcgtgct cggccatcgc ggcgagcgcc cacggttgaa tcttgctctc
     1381 ctcgcgcagg tcgccgcgca cgccggcgcc gcgcgacaaa ccgctgagat cgggatggcc
     1441 gtcgccggcc ttcggcgcgg gcgcgctcag gtctgggttg ccgtcggcgg tgcgcgggat
     1501 gccgggagtc ttgagcgtga gccactgcgc cgaaacgggc gcggccaacg ccgagaggat
     1561 caacgtggcg actaggtgtt tcatggctgc ctgcttacgt tttggtgcta ggcttcgacc
     1621 atcgtagccg atccccgacg ccactcacta cgcgtgagcg ggtcaagaat tcgcaggagc
     1681 tagggatatg aagcgcgccc ccttggtctt gatcggagcc gcgtggtgcc tcgcgtccgt
     1741 aagcgctgcc gcgcatcacg cgttcgccgc cgagttcgac atcaacaagc ccgtgcagct
     1801 gacgggcacc gtcaccaaaa tcgaatggac gaatccacac gcgtggctct tcatcgacgc
     1861 gaaagacgac agcggcgccg tgcacaactg ggccatcgag ctcgtcggca tcaacgatct
     1921 gctcaggctc gggtggggac gcgaccgagt aaaagccggc gacacgatca gcgtcgtcgg
     1981 gttcggcgcg cggaacggca cgaataccgc gaacgcggct tcggtgacgc tcgcgagcac
     2041 cggtgagctg ttgtgggaga gcgc
//
LOCUS       DATCUD010000471         1905 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54432, whole genome shotgun sequence.
ACCESSION   DATCUD010000471 DATCUD010000000
VERSION     DATCUD010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54432"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..602
                     /locus_tag="VIQ99_06960"
     CDS             <1..602
                     /locus_tag="VIQ99_06960"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9182921.1"
                     /translation="VEQLEEWRGIPSPFSVAVNVSPQILSHPEFIERVKVLKAALDGR
                     QMSLTIELTEDSLVQGDASSLQAIERIRKLGVGLAIDDFGKGYSSLTYLKQIPATEIK
                     IDKRFIGTLAVDETDRQIVKTVIALAHALGMRVVAEGVDSAEALTAVADLECETAQGF
                     FIARPMRGNLVPEWIDQYLSTATNRKLMIARDWHTPVHA"
     gene            662..>1905
                     /locus_tag="VIQ99_06965"
     CDS             662..>1905
                     /locus_tag="VIQ99_06965"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase N-terminal domain-containing
                     protein"
                     /protein_id="HEY9182922.1"
                     /translation="MGLLLDFVYVVACIVAAPWLLYRLCGPARRDLLLRFGIGIGDRL
                     SRSVWLHGSSAGEVSVLKPLVAVLERDFPDVPLVISAFTSTGLATARKSFSRHRVVPL
                     PFDLSFVIARYLRHFDPRLLVVAESEFWPNLIGVAHTRRIPVALVNGKMSAKSFRVHV
                     RTGLVPRVLRKLDLLAVQTEEHAQRMRALGVDARKLHITGNMKYDLAHPPIGADQTRE
                     LRRTLGYGAADVVIIGGSLHEREDEALLDAYAAACAVCREAALIVVPRYPADAPTALE
                     RARARGYSAALKTAVDLGSAPAPGVGGVLVVDTVGELGRLYASADLAFVGGSLFFRGA
                     NKGGHNLMEPAILGVPVLFGPYNFSFKETVDDLLAADAGRLVRDAGELTTAVVALVTD
                     RDARRDLGERARRVVMAGQGATA"
BASE COUNT          305 a          611 c          640 g          349 t
ORIGIN      
        1 tcgtggagca gctcgaggag tggcgcggga taccgagccc gttctcggtg gccgtgaacg
       61 tttcaccgca gatcctatcg catcccgagt tcatcgagcg cgtgaaggtg ttgaaggcgg
      121 cactcgacgg gcgtcagatg agtctcacga tcgagctcac cgaggacagc ttggtgcagg
      181 gagacgcctc gtccctgcaa gccatcgagc gaatacgcaa gctcggcgtc ggtctcgcga
      241 tcgacgattt cggcaagggc tattcgtcgt tgacttacct gaaacagatt cccgcgaccg
      301 agatcaaaat cgacaaacgt ttcatcggca cgctggccgt cgacgagacc gacaggcaaa
      361 tcgtgaagac cgtgatcgcg ctcgcgcacg cgctcggaat gcgtgtcgtc gccgaaggcg
      421 tcgacagcgc cgaggcgctc acggccgtag cggacctcga gtgcgagacg gcgcaggggt
      481 tcttcatcgc ccggcccatg cgcggcaatc tcgttccgga atggatcgat caatacctgt
      541 cgacggcgac gaaccgcaag ctgatgatcg ctcgagactg gcacacgccg gttcacgcct
      601 gagcaccgcc gtactccgac tgagttaaac tcccgcgcga ccgacgccga cgggttgctc
      661 gatggggctg ttgctcgact tcgtttacgt tgttgcgtgc atcgtggcgg cgccgtggct
      721 gctctaccgg ctctgtggcc ctgcgcggcg cgaccttctg ctgcgattcg gaatcggcat
      781 cggcgacaga ttgtcgcgca gcgtttggct gcacgggtcg tccgccggcg aagtctcggt
      841 cctgaagccc ctggtggccg tgctcgagcg cgatttcccc gacgtgccgc tcgtgatctc
      901 ggccttcacg tcgaccgggc tcgcaaccgc gcgcaagtcg ttctcgcggc accgcgtggt
      961 gccgctgccg ttcgatctgt cgttcgtgat cgcgcgctac ttgcggcact tcgatccacg
     1021 tttgctggtg gtggccgaat ccgagttctg gccgaacttg atcggagtcg cgcatacgcg
     1081 ccgcataccc gtcgcgctcg tgaacggcaa gatgtccgcg aagtcgtttc gcgttcacgt
     1141 ccgcacgggc ctcgttccgc gcgtgctccg caagctcgac ttgctcgcgg tgcagaccga
     1201 ggagcacgca cagcgcatgc gtgcgctagg agtcgacgcg cggaagctgc acattaccgg
     1261 caacatgaag tacgacctcg cgcatccgcc gatcggcgcg gaccaaacac gggagctacg
     1321 gcgcacgctg ggctatggtg cggccgacgt cgtgatcatc ggcggcagct tgcacgagcg
     1381 cgaggacgaa gcgttgctcg acgcctacgc tgcggcctgc gcagtctgcc gggaggccgc
     1441 gttgatcgtc gttccacgct acccggccga cgcaccgacc gccttggagc gtgcgcgagc
     1501 gcgcggctac tctgcggcgt tgaagactgc ggttgactta ggctcggcgc cggctccggg
     1561 cgtgggcgga gtgctcgtgg tcgatacggt cggagagctc ggcaggctgt acgcgagcgc
     1621 ggatctcgcg ttcgtcggcg gcagtctgtt ctttcgcggc gccaacaagg gcggccacaa
     1681 cctcatggag cccgcgattc tcggcgtgcc ggtgctgttc gggccgtaca acttcagctt
     1741 caaggaaacc gtcgacgact tgctcgcggc ggatgccggt cgtctcgtcc gcgatgcagg
     1801 cgagctcacg acggccgtcg tcgcgctcgt gacggatcgc gatgcacggc gcgatctcgg
     1861 cgagcgtgca cgccgagtgg tcatggccgg acagggagca acggc
//
LOCUS       DATCUD010000472         2190 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_68750, whole genome shotgun sequence.
ACCESSION   DATCUD010000472 DATCUD010000000
VERSION     DATCUD010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68750"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..871
                     /locus_tag="VIQ99_06970"
     CDS             <1..871
                     /locus_tag="VIQ99_06970"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY9182923.1"
                     /translation="RNPDFVAYLKAPTGEGMTVESPRHESGWLHVQIIPYGEAQRLAI
                     IRDVTREKNIERTRRDFVANASHELRSPLTVISGYLDTLADGADVPAGWREPVTEMRR
                     QAERMTRILRDLIELTRLESAEVAAPHDFVDVAGMLKPIVAEFQGRPGPTVQLALETD
                     AALLGKESELHSIFYNLVNNAVRFTPAGGSVRVVWRVEGSNAVFEVVDTGIGIPEEQI
                     PRVTERFYRVDPGRSRATGGTGLGLAIVKHALQRHDGQLRIRSREGEGSTFSCTFPRE
                     RVVFRGAAVQAVL"
     gene            894..1634
                     /gene="phoU"
                     /locus_tag="VIQ99_06975"
     CDS             894..1634
                     /gene="phoU"
                     /locus_tag="VIQ99_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018232601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEY9182924.1"
                     /translation="MEVEDLGHHISRRFNEDLERVRNSVLSMGGLVEEQLDRAVKALS
                     DGNSQLGLQVAEDDIKVNRMEVSIDEECSRILATRAPTAGDLRLVIAIIKTITDLERI
                     GDEAEKIGVIAARLATVERPSTNYRELRNLARHVKQMVHGALNAFARLDTKGALEVVK
                     ADNAVDEEYESIYRQGITFMMEDPRTITRVMDLTWMARALERIGDHAKNICEYVIFMV
                     HGKDVRHIGVKNIEAEVEQGVRRVEGTT"
     gene            1634..2134
                     /locus_tag="VIQ99_06980"
     CDS             1634..2134
                     /locus_tag="VIQ99_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013535970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEY9182925.1"
                     /translation="METRRARRIANALGVAIVVALMGYALYQQHVVGLEACPLCILQR
                     AAMIAIGLVFAVAALHAPVGAGARVYAVLGALAALTGMGISGWHVRLQNLPPSEVPAC
                     GPGFDYIMDAFGWLGGLRMIFTGSGECAVVNWSFLGLSMPAWVFIWFVALGALVLRAN
                     WSRVRP"
BASE COUNT          377 a          691 c          760 g          362 t
ORIGIN      
        1 gcgcaacccg gatttcgtcg catatctgaa ggcaccgacc ggcgagggaa tgacggtcga
       61 atcgccgcgg cacgagtcgg gttggttgca cgtgcagata atcccgtacg gcgaggctca
      121 gcgtctcgcg atcattcgcg acgtgacgcg cgagaagaac atcgagcgca cgcgccgcga
      181 cttcgtcgcg aacgcctcac acgagctgcg ctcgccgctg accgtgatca gcggctacct
      241 cgacactctt gcggacggcg ccgacgtgcc ggccgggtgg cgcgagccgg tgaccgagat
      301 gcgacgccag gcggagcgca tgactcggat cctccgggac ttgatcgagc tcacgcggct
      361 cgagtccgcg gaagtcgccg cgccgcacga tttcgtcgat gtcgccggga tgttgaagcc
      421 gatcgtcgcc gagtttcagg gccggccggg gcctaccgtg cagctcgcgc tcgaaacgga
      481 tgcggcgttg ctcggcaagg agtcggagct gcactcgatt ttctacaacc tcgtcaacaa
      541 tgcagtgcgg ttcacgccgg caggcggcag cgtgcgcgtg gtctggcggg tggagggctc
      601 gaacgcggtc ttcgaggtcg tcgacacggg catcggcatt ccggaggagc agatcccgcg
      661 cgtcacggag cgtttctacc gcgtcgaccc cggccgctcg cgcgcgaccg gcggcaccgg
      721 cctcggtctc gcgatcgtga agcatgcgtt gcagcgtcac gacggccagc tgcggatccg
      781 cagtcgcgaa ggcgagggca gcacgttcag ttgcacgttt ccgcgggagc gtgtcgtgtt
      841 tcgcggcgct gccgtgcagg cagtactata gttgctagcg gaggaacgcg agcatggaag
      901 tcgaagatct cggtcatcac atctcgaggc gattcaacga ggacctcgaa cgtgtccgga
      961 actccgtgct gtcgatgggc gggctcgtcg aggagcagct cgaccgcgcc gtaaaagcat
     1021 tgtcggacgg caacagccag ctcggcctcc aagtcgccga ggacgacatc aaggtcaacc
     1081 gcatggaggt cagcatcgac gaggagtgca gccgcattct ggcgacacgc gcgccgaccg
     1141 ccggcgattt acgcctcgtg atcgcgatca tcaagacgat cacggatctc gagcgcatcg
     1201 gcgacgaagc cgagaagatc ggcgtgatcg ccgcgcggct tgccaccgtc gagcggccct
     1261 cgaccaatta ccgcgagctc cgcaacctcg cgcgccacgt gaagcaaatg gtgcatggcg
     1321 cgttgaacgc attcgcgcgg ctcgatacga agggcgcgct cgaggtcgtg aaggccgaca
     1381 acgcggtcga cgaggaatac gagtcgatct accgccaggg catcacgttc atgatggaag
     1441 acccgcgcac gatcacgcgc gtgatggacc tgacgtggat ggcgcgcgcg ctcgaacgca
     1501 tcggcgacca cgcgaagaac atctgcgaat acgtgatttt catggtgcac ggcaaggacg
     1561 tgcgccacat cggcgtcaag aacatcgagg ccgaggtcga gcaaggagtg cggcgagtgg
     1621 agggaaccac gtgatcgaaa cgcggcgagc tcgccgcatc gccaatgcgc tcggagtcgc
     1681 gatcgtcgtc gcgctcatgg gctatgcgct gtaccagcaa cacgtcgtgg gtctcgaagc
     1741 atgcccactc tgcatcctgc agcgggcggc catgatcgca attgggctcg tgttcgcggt
     1801 ggccgcgctg cacgcgccgg tcggcgccgg cgcgcgcgtg tacgcggtgc tcggcgcgct
     1861 cgcggcgctg acggggatgg ggatctcggg ctggcacgtg cgactgcaga acctgccgcc
     1921 gtccgaagtg ccggcgtgcg ggcctggctt cgactacatc atggacgcgt tcggttggct
     1981 cgggggctta cgcatgatct tcacgggctc gggcgagtgc gcggtcgtga attggtcgtt
     2041 cctcggcctc tcgatgccgg cgtgggtgtt catctggttc gtcgcgctcg gcgccctcgt
     2101 cctccgcgcg aactggtccc gcgttcggcc gtagccacga tcgcttcgta gacgcgcatt
     2161 ccggccgcag gcagcaggcg tccccggacg
//
LOCUS       DATCUD010000473         1595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54463, whole genome shotgun sequence.
ACCESSION   DATCUD010000473 DATCUD010000000
VERSION     DATCUD010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54463"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..848
                     /locus_tag="VIQ99_06985"
     CDS             <1..848
                     /locus_tag="VIQ99_06985"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182926.1"
                     /translation="ASAMMLAIVNDRFDMAATLLELGADANDGSLYYAVVMRDAPTDW
                     RARDGSRLRADHENRLTALDLVARLLDAGADPNKEFTGQMHSASMCCDPKASGTPFYR
                     AAVAADVESLKLMVAHGADVNWTPKPVEGAPPMPFGDNTGLTPLMVALNGGKGQLMDG
                     GPGDIREGTVGIWREPGNRDPADAVRVLLEAGADPDAVNPKGDSALHIAAHDGRLGPI
                     RELVAGGASVELRNKDGLTALELVETMEPRKLSALAEMIGLFDDGAQPAETAEFLRQQ
                     IATRR"
     gene            complement(858..>1595)
                     /locus_tag="VIQ99_06990"
     CDS             complement(858..>1595)
                     /locus_tag="VIQ99_06990"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9182927.1"
                     /translation="RGDRYLVNGQKVWISRAEHSDLMLLLVRTTPRESVAKPTDGMSV
                     LLVDLRDAVGRGLTIKPIVTMMNHASTELFFDDLPVPAANLVGVEGKGFGYILDSMNA
                     ERILIASECIGDARWFIAKAAAYATEREVFGRPIGQNQGIQFPIARAHVQTEAAALMV
                     AKAAALFDAGEKCGAEANMAKMLAAEASAAAADVCIQTHGGYGFAEEYDIERKFRETR
                     LYQVAPVSTNLILSFIGTHVLGMPKSF"
BASE COUNT          256 a          553 c          546 g          240 t
ORIGIN      
        1 gcgcgagcgc gatgatgctg gccatcgtca acgatcgctt cgacatggcc gcgacattgc
       61 tcgagctagg agcggacgcg aacgacggct cgctctacta cgcagtcgtg atgcgcgacg
      121 cgcccacgga ctggcgagcg cgcgacggct cgcgcctgcg cgccgatcac gagaaccgcc
      181 tcacggcgct cgacctcgtg gcgcggctgc tcgacgcggg cgcggacccg aacaaggagt
      241 tcacgggcca gatgcactcg gcatcgatgt gctgcgatcc gaaggcgtcc ggcacgccgt
      301 tctaccgcgc ggccgtggcc gccgacgtcg agtcgttgaa gctcatggtc gcgcacggcg
      361 ccgacgtcaa ctggacgccg aagccggtcg aaggcgcgcc gccgatgccg ttcggcgaca
      421 acacggggtt gacgccgctc atggtggcgc tgaacggcgg caaaggtcag ctcatggacg
      481 gcggccccgg cgacatccgc gagggcacgg tcggcatttg gcgcgagccc ggtaatcgcg
      541 accccgcgga cgccgtgcgc gtgctgctcg aggccggcgc ggatcccgac gcggtaaacc
      601 cgaaaggcga ctcggcgctg cacatcgcgg cgcacgacgg ccggctcggc ccgatccgcg
      661 agctcgtcgc gggcggcgct tcggtcgagt tgcgcaacaa ggacggcctc acggcgctcg
      721 agctcgtcga gacgatggag ccgcggaagc tctcggcgct cgccgagatg atcgggctgt
      781 tcgacgacgg ggctcagccc gccgagaccg ccgagttcct ccggcaacag atcgcgacgc
      841 gacgctgata gcgggcttca gaacgacttc ggcatcccga gcacgtgcgt tccgatgaac
      901 gacaggatca gattcgtcga gaccggcgcg acttgataca gccgcgtctc gcggaacttg
      961 cgctcgatgt cgtactcctc ggcgaagcca tagccgccgt gcgtctgaat gcagacgtcg
     1021 gccgcggcgg ccgacgcttc ggccgcgagc atcttcgcca tgttggcctc ggcgccgcat
     1081 ttctcgccgg cgtcgaacag cgcagccgcc ttcgcgacca tcagcgccgc ggcctcggtt
     1141 tggacgtgcg cgcgtgcgat cggaaactgg atgccctggt tctggccgat cggccggccg
     1201 aacacctcgc gctcggtcgc atacgccgcg gccttcgcga tgaaccagcg cgcgtcgccg
     1261 atgcactccg acgcgatcag gattcgctcg gcgttcatgc tgtccaggat gtagccgaag
     1321 cccttgccct cgacgccgac cagattcgca gccggcacag ggaggtcgtc gaagaagagc
     1381 tcggtgctcg cgtgattcat catcgtgacg atcggcttga tcgtgagccc gcgaccgacc
     1441 gcgtcgcgca ggtcgacgag cagcacggac atgccgtccg tcggcttcgc gaccgattcg
     1501 cgcggcgtcg tgcgcacgag cagcagcatc aggtccgagt gctccgctcg ggagatccac
     1561 accttctgcc cgttcaccag gtagcggtcg ccgcg
//
LOCUS       DATCUD010000474         1985 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_103965, whole genome shotgun sequence.
ACCESSION   DATCUD010000474 DATCUD010000000
VERSION     DATCUD010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_103965"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VIQ99_06995"
     CDS             <1..816
                     /locus_tag="VIQ99_06995"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY9182928.1"
                     /translation="QFQMGDVLVLVYATLFVGLLFRAVAIVTGTLLLAFVGIGWYLGV
                     PSADLSYAAAVMFATTLMCGLSALRVERLVRASFIETQLLNDIAERDGLSGLYNRRMF
                     DTLANRLWLHARRNHEALQVILVDIDHFKPFNDLYGHQAGDNCIRQVAAIIARAARRP
                     FDFCARYGGEEFVLVLYAPSGDDASAVPEQIRRETMALGIPHASSAAAGTITVSIGSA
                     IAPPDSKRSLAGLIQAADEALYRAKQLGRNRVLHVDAGDSETPTGAFKVFAVK"
     gene            902..1417
                     /locus_tag="VIQ99_07000"
     CDS             902..1417
                     /locus_tag="VIQ99_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007191001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HEY9182929.1"
                     /translation="MNKVKSTLESWVFHSRWLLAPFFVGLLLAIVALLVKFLKALWTL
                     AFEVAHLTGEALIVEILSLVDATLIASLLLIIAFSGYENFVSKIGTGDHEDRPAWMGR
                     VGFSDLKIKLMGAIVAISAVELLKAFINVDEMTWQQLSWKVGIHITFVVSGVLFAITD
                     RLTESRAGGGH"
     gene            1554..>1985
                     /locus_tag="VIQ99_07005"
     CDS             1554..>1985
                     /locus_tag="VIQ99_07005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182930.1"
                     /translation="MSASPNRPKRHEPPTPIDSGALENLRYIRSTIEAAHTFTTVPGK
                     GCIAMGLTALAAVGLESVPALAAHWLAIWVGAAIIACGAALWFMEQKAHAQGLSLRRA
                     VARRFFMTLAPAFLTGAILTAALAGEVNRELITGMWLLLYGT"
BASE COUNT          324 a          637 c          633 g          391 t
ORIGIN      
        1 cagttccaaa tgggcgacgt cctggtgctc gtgtatgcga ctctgttcgt cggcctgctg
       61 ttccgcgcgg tggcgatcgt gaccggaacg ttgctgttgg cgttcgtcgg tatcggctgg
      121 tatctcggcg tgccctcggc cgacctttca tacgcagccg cggtgatgtt cgcgacgacg
      181 ttgatgtgcg gactatccgc gctgcgcgtc gagcgactcg tgcgagcgag cttcatcgag
      241 actcagttgc tgaacgatat cgccgagcgc gacggcttga gcggactcta caaccggcgc
      301 atgttcgaca ctctcgcgaa tcggctgtgg ctacacgcgc gacgcaacca cgaggctctg
      361 caagtgattc tcgtcgacat cgatcacttc aagccgttca acgatctcta tggccaccag
      421 gcgggcgaca attgcattcg gcaggtcgcg gcgatcattg cgcgcgccgc gcgccggccg
      481 ttcgatttct gcgcacgcta tggcggagag gagttcgtgc tcgtgctcta tgcgccttcg
      541 ggcgacgacg ccagtgcggt acccgagcag attcggcgcg agacgatggc gctcggcatt
      601 ccgcacgcga gctccgccgc cgcggggacg atcaccgtca gcatcggctc cgcgatcgcg
      661 ccgcccgaca gcaagcggag tctcgcgggc ctgattcagg ccgccgacga agcgctgtac
      721 cgcgccaagc aactcggccg caatcgcgtg ctacacgtcg acgccggcga ctccgagacg
      781 ccgaccggcg ccttcaaggt cttcgccgtc aaatagcggc agttcgcgtc gatgcattat
      841 attgcgcaca cgcgcgggcg ttgccggcgc ccgatcccct cctgacagcg agacttccgt
      901 catgaacaaa gtcaaatcga cgctcgagtc ttgggtattt cacagccgtt ggttgttggc
      961 gccgttcttc gtcggattgc tgctcgcgat cgtggcgctg ctcgtgaagt tcctgaaggc
     1021 tctgtggacg ctggccttcg aggtcgcaca cctgaccggc gaagcgctga tcgtggagat
     1081 actctcgctg gtcgacgcaa cgttgatcgc gtcgctgctg ctgatcatcg ccttcagcgg
     1141 ctacgagaac ttcgtctcca agatcggcac cggcgatcac gaggaccggc ccgcctggat
     1201 gggccgcgtc ggcttctcgg atctcaagat caagctgatg ggcgccatcg tcgcaatctc
     1261 ggccgtcgag ttgctgaaag cgttcatcaa cgtcgacgag atgacctggc aacagctgtc
     1321 ctggaaagtc gggattcaca tcacgttcgt cgtctcgggc gtgctgtttg cgatcacgga
     1381 ccgcctcacg gaaagccggg ccggcggcgg gcattagccg gcgtcgagtc gcgcgtgacc
     1441 gccgtcttat gacaggttcc cgccgcgggc aagtgaacca attcgcggcc cgttccagcc
     1501 gagcatggaa atggctcacg gtttcgttgt actttatgct gtaaagtact cctatgagcg
     1561 cctcgccgaa ccgcccgaag cggcatgagc cgccgacccc gatcgattcc ggggccctcg
     1621 agaatctgcg ttacattcgc agcacgatcg aggccgcgca cactttcacg acagtccccg
     1681 gcaagggttg catcgcgatg ggactcacgg cactcgcggc cgtcggcctc gagtccgtcc
     1741 cagcgctcgc ggcgcactgg ctagcgatct gggtcggcgc tgcgatcatc gcgtgcggag
     1801 ccgcgctgtg gttcatggag cagaaggcgc acgcgcaagg cttgagcctg cggcgcgccg
     1861 ttgcgcggcg ctttttcatg acgttggcgc ccgcgttcct gaccggcgct atcttgacgg
     1921 cggcgctcgc cggcgaagtg aaccgcgagc tgatcacggg catgtggctg ctgctgtacg
     1981 gaacc
//
LOCUS       DATCUD010000475         1524 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_75856, whole genome shotgun sequence.
ACCESSION   DATCUD010000475 DATCUD010000000
VERSION     DATCUD010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75856"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1524
                     /locus_tag="VIQ99_07010"
     CDS             <1..>1524
                     /locus_tag="VIQ99_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY9182931.1"
                     /translation="VSSPERLTKPLVRHDYASKEAVPPTMRFEDRFTVFREATWEEAL
                     ARAASGLKRILDERGGKSLSGFGSAKGSNEEAYLFQKLVRTGFETNNVDHCTRLCHAS
                     SVAALMEGIGSGAVSAPFNAAMDAECVIVIGARPTVNHPVAATFFKQAAKRGAKLIVM
                     DPRGQDLMRHATHALKFKPGSDVALLNSLLHTIIAEKLYDEDYIREHVNGFEALKAKV
                     KEFSPEAMAGVVGIEASVLRDVARIYATSKASIIFWGMGISQHTHGTDNSRCLIALAL
                     ITGQIGRPGTGLHPLRGQNNVQGASDAGLIPMYFPDYKSVETLDIRSWYENFWGQTLD
                     PKRGLTVVEIMDAVHEGEIVGMYIMGENPAMSDPDQDHARAALAKLDHLVVQDIFLTE
                     TAWYADVVLPASSHAEKLGTFTNTNRQVQMGRPALALPGEARQDWELIVELARRIGLD
                     WKYEHVSDVYAEMAATMPSLKNISWERVDREDSVIYPSKAPDVPGDRIAFTEGFPTA"
BASE COUNT          288 a          482 c          502 g          252 t
ORIGIN      
        1 cgtcagctcg ccggaacgcc tgacgaagcc gctcgtgcgg cacgactacg cgtcgaaaga
       61 agcggtgccg ccgacgatgc gcttcgagga ccgtttcacg gtgttccgcg aagccacgtg
      121 ggaagaggcg ctggctcgtg cggcctcggg cctgaaaagg attctcgacg agcgcggcgg
      181 caaatcgctg tcgggcttcg gctcggcgaa gggctcgaac gaggaagcct atttgttcca
      241 gaagctcgtg cgcacgggct tcgagacgaa caacgtcgat cactgcacgc gactctgcca
      301 cgcgtcgtcg gtcgcggcgc tcatggaggg catcggctcg ggcgccgtgt cggcgccgtt
      361 caacgccgcg atggacgccg agtgcgtgat cgtgatcggc gcgcggccga ccgtgaacca
      421 tccggtagcg gccacgttct tcaagcaagc cgcgaagcgc ggtgccaagc tgatcgtgat
      481 ggatccgcgc ggccaagatc tgatgcgtca cgcgacgcat gcgctgaagt tcaagcccgg
      541 cagcgacgtc gcgctgctga actcgctgct gcacacgatc atcgccgaga aactctacga
      601 cgaggactac atccgcgagc acgtcaacgg tttcgaggcg ttgaaggcga aagtcaagga
      661 gttctcgccc gaagcgatgg ccggcgtcgt cggcatcgag gcgagcgtgc tgcgcgacgt
      721 cgcgcgcatc tacgcgacgt cgaaagcgtc catcatcttt tggggcatgg gcatctcgca
      781 gcacacgcac ggcaccgaca actcgcgctg cttgattgcg ctggcgctga tcacgggcca
      841 gatcggccgg ccgggcaccg gcctgcatcc gctgcgcggc caaaacaacg tgcaaggcgc
      901 gtccgacgcc gggctgatcc cgatgtactt cccggactac aaatccgtcg agacgctcga
      961 cattcgcagt tggtacgaga acttctgggg ccaaacgctg gacccgaaac gcggtctcac
     1021 tgtggtcgag atcatggacg ccgtgcacga aggcgagatc gtcggcatgt acatcatggg
     1081 cgagaacccc gcgatgtccg accccgatca ggaccatgcg cgtgcggcgc tcgcaaagct
     1141 cgatcatctg gtcgtgcagg acatcttcct gaccgagacg gcgtggtacg cggatgtcgt
     1201 gctgcccgcc tcctcgcacg ccgagaagct cggcaccttc acgaacacga atcggcaggt
     1261 tcagatgggg cggccggcgc tcgcgttgcc cggcgaggcg cgccaagact gggagctcat
     1321 cgtcgagctc gctcggcgaa tcggcctcga ttggaaatac gagcatgtct cggacgtcta
     1381 tgcagagatg gccgcgacga tgccgtcgct gaagaatatc tcgtgggaac gtgtcgaccg
     1441 cgaagactcg gtgatttacc cgtccaaggc tcccgacgtg cccggcgatc ggatcgcgtt
     1501 cacggaaggc tttccgaccg ccga
//
LOCUS       DATCUD010000476         2313 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40198, whole genome shotgun sequence.
ACCESSION   DATCUD010000476 DATCUD010000000
VERSION     DATCUD010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40198"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1990
                     /gene="polA"
                     /locus_tag="VIQ99_07015"
     CDS             <1..1990
                     /gene="polA"
                     /locus_tag="VIQ99_07015"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010961789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEY9182932.1"
                     /translation="LPIGVDALALRPPDNERLAALFESLEFTRLLRRVRDPAAPKPPA
                     TAAAEPVAGGQSRRSTSANYETVLSPADLERWCERIASAPLVAIDTETTSLAYMRAEL
                     VGISLAVKTGEGAYIPVAHRYPGAPDQLSRSSVLERLKPWLESSAPKVGHHLKYDAHI
                     FANHGVSLRGIAHDTMLESYVLNSTAARHDMDSLAALYLGVETVKYEDVAGKGAKQIT
                     FDQVDLDTATRYAAEDADVTLQLHEALWPKLKEVPELAHVYTDVELPLVRVLERMEYA
                     GVQVDARLLREQSQELAQKMAATEQAAYVAAGGPFNLGSPKQLQEVLYDRLQLPVLGK
                     TPKGQPSTAEDVLEQLAESYDLPRLVLEYRGLSKLKSTYTDKLPGDIDPRTGRIHTSY
                     HQAVAATGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGHKLLAADYSQIELRIMAHL
                     SGDEGLLEAFAHEQDVHRATAAEVFGTPLDQVTAEQRRSAKAINFGLIYGMSAFGLAR
                     QLGIERAEAQAYVDRYFERYPGVRRYMDETRAKARRAGYVSTVFGRRLYLPEINAKNA
                     QRRQYAERSAINAPMQGTAADIIKRAMIGVAAWLDAERPRARLIMQVHDELVIEVPDT
                     DVAEVAAAVKRIMESAAELRVPLRADQGLGANWDEAHK"
BASE COUNT          417 a          807 c          742 g          347 t
ORIGIN      
        1 gctgccgatt ggcgtggatg cactcgcgct tcgcccaccc gacaacgagc gactcgcggc
       61 cttattcgag agcctcgagt tcacacgact gctgcgacgg gtccgtgacc cagccgcgcc
      121 gaagccacct gcgacggccg ccgcagagcc ggtcgcgggt gggcagtctc gacgcagcac
      181 gagcgcgaat tacgagacgg tgctgtcccc cgcggatctc gagcgctggt gcgagcgaat
      241 cgcctcggca ccgctcgtgg cgatcgatac cgaaaccacg agcctcgcgt acatgcgcgc
      301 agagctcgta ggcatttcac ttgcggtcaa gaccggcgag ggcgcctaca tcccggtcgc
      361 gcaccgatac cccggcgctc cggaccagtt gagccgctcg agcgtcctcg agcgattgaa
      421 gccgtggctc gagagctcgg ccccgaaggt cggccaccac ctgaagtacg acgcgcacat
      481 tttcgcgaat cacggcgtgt cgctgcgcgg catcgcgcac gacacgatgc tcgagtctta
      541 cgtgctgaac tccacggcgg cgcggcacga catggactcc ttggccgcgc tctatctcgg
      601 cgtcgagacc gtgaaatacg aggatgtcgc cggcaaaggc gcgaagcaga tcacgttcga
      661 ccaagtcgac ctcgacacgg cgacacgcta tgcggccgag gatgccgacg tcactctgca
      721 gctgcacgag gcgctgtggc cgaagctcaa ggaagtgccg gagctcgcgc acgtctacac
      781 cgacgtcgag ctgccgctcg tgcgcgtgct cgagcgcatg gaatacgcgg gagttcaggt
      841 cgacgcacgt ctgctgcgcg agcagagcca ggagctcgcg cagaaaatgg cggccaccga
      901 gcaagccgca tacgtggcgg ccggcggccc gttcaatctc ggctcaccga agcagctcca
      961 ggaggtcctg tacgaccgcc tgcagctacc cgtgctcggc aagactccga agggccagcc
     1021 atcgacggcc gaggacgtgc tcgagcaact cgcggagagc tacgatctgc cgcggctcgt
     1081 gctcgagtac cgcggcctgt cgaagctgaa gtcgacgtac acggacaagc tgcccggcga
     1141 catcgatccg cgcaccggtc ggattcatac ctcgtaccac caggccgtcg cggccacggg
     1201 caggctctcc tcgtccgacc cgaatctgca gaacattccg atcaggacgg ccgagggacg
     1261 tcgcatccgg caggccttcg tcgcgccgaa ggggcacaag ctactggccg cggactattc
     1321 gcagatcgag ctcaggatca tggcgcactt gtcgggtgac gaagggttgc tcgaggcgtt
     1381 cgcgcatgag caggacgtgc accgcgccac ggccgccgag gtgttcggca ctccgctcga
     1441 ccaggttacg gcggagcaac ggcgttccgc gaaggcgatc aacttcggcc tgatctacgg
     1501 aatgtcggca ttcggcctcg cgcggcaact gggcatcgag cgcgccgagg cgcaagccta
     1561 cgtggaccgg tacttcgagc gttaccccgg cgtgcgccgc tacatggacg agacacgcgc
     1621 gaaggcgcgc cgcgccggct acgtgagcac cgtgttcggc cggcgcctgt acctgcccga
     1681 gatcaatgcc aagaatgccc agcgccggca atacgccgag cgcagcgcga tcaacgctcc
     1741 gatgcagggc acggccgccg acatcatcaa gcgcgccatg atcggcgtgg ccgcttggct
     1801 cgacgcggag cggccgcgcg cgcgtctgat catgcaagtc cacgacgagc tcgtgatcga
     1861 agtgcccgat accgacgtcg ccgaggtcgc cgcggccgtc aagcgcatca tggaatccgc
     1921 ggccgagctc cgcgtcccgc tgcgcgcaga tcaaggcctc ggcgccaatt gggacgaggc
     1981 ccataagtag cgttggaact ttttctcggg ggcccgggac taagcactcg gcactcagga
     2041 cgagtgctcc cgctatcctc cctaaagcgg ggtcctacgg tcccggctca ccccgccggg
     2101 atctggcacc ccgggtgcgt cccctgaatc ccgcacccgg ggtcctttaa cccccgacct
     2161 cgagccaatt ctcgagccac gcctgcgcgt cggcgacacc ttcccgcgtc agcgccgaaa
     2221 aacaagtcag cttcgcggaa ggccccagct gcttcgcaac ctgctgccgt tgcgcaagcg
     2281 ctgccccgcg gccgaccttg tcggccttgg tca
//
LOCUS       DATCUD010000477         2022 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90020, whole genome shotgun sequence.
ACCESSION   DATCUD010000477 DATCUD010000000
VERSION     DATCUD010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90020"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VIQ99_07020"
     CDS             complement(<1..607)
                     /locus_tag="VIQ99_07020"
                     /inference="COORDINATES: protein motif:HMM:NF019850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HEY9182933.1"
                     /translation="MRSTAQHSLVVGLGDTGAAVARFLSARGERVRVIDSRAVPPGLA
                     ALRAAYPDVEVAVETLDERWLDGASRVLLSPGLPYDLPLAREARRRGIAVIGDIELFA
                     LAARAPVIAVTGSNGKSTVTTLAAKMLEAQGLRAPAGGNLGPPALDLLAGPADAYVLE
                     ISSFQMETTDSLAPLAATVLNVSPDHLDRHGTLERYAELKEK"
     gene            complement(685..1773)
                     /gene="mraY"
                     /locus_tag="VIQ99_07025"
     CDS             complement(685..1773)
                     /gene="mraY"
                     /locus_tag="VIQ99_07025"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008045924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEY9182934.1"
                     /translation="MLIHVTDYLTQFYSGFNVFTYLTTRAILGALTALVLSFAFGPYL
                     IQRLTMQRIGQQIRQVGPESHFPKAGTPTMGGALILLAIAVSTLLWANLTNRFVLLTL
                     GGTLFFGLIGFVDDYKKVILRNSKGLSAKAKIFWQTVGALGLAVGFYVTAENPPVEHA
                     LLIPYIPGIAIPLGAVGYVLFTTLVVVSASNGVNLTDGLDGLAIMPSVLVGTALGIFA
                     YAAGNSIYSSYLGIPYVAGSGELLVFCAALAGAGLGFLWFNTYPAQVFMGDIGALALG
                     AALGLVAVSVRQELVLFIMGGVFVVESVSVIIQVASYKMTGRRIFRMAPLHHHFELKG
                     WPEPKVIVRFWIITVILVLIGLASLKIR"
     gene            complement(1773..>2022)
                     /locus_tag="VIQ99_07030"
     CDS             complement(1773..>2022)
                     /locus_tag="VIQ99_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEY9182935.1"
                     /translation="LHKEIGEYARGRCDLLFAIGDLASEAAAAFGTDGRRLADIAAAR
                     DALESLLGKDVTVLVKGSRVMGLDRLVKTLEIESARAT"
BASE COUNT          403 a          682 c          632 g          305 t
ORIGIN      
        1 gcttctcctt gagctccgcg taacgctcga gtgtgccgtg acgatccagg tggtccggcg
       61 agacgttcaa caccgtcgcg gccagcggcg ccaagctatc ggtcgtctcc atctggaagc
      121 tcgagatctc gagcacgtac gcgtccgccg gccccgcaag caaatcgagc gccggaggac
      181 cgaggttgcc ccctgcgggg gcacggagcc cttgtgcttc gagcatcttc gccgccaacg
      241 tcgtcacagt gctcttgccg ttgctgccgg tcacggcgat cacaggcgct cgcgccgcga
      301 gcgcaaacag ctcgatgtcg ccgatgaccg cgatgccgcg ccggcgagcc tcgcgggcca
      361 aaggcaaatc gtacggcagg cccggcgaca gcagcacgcg gctcgcacca tcgagccaac
      421 gctcgtcgag cgtctcgacg gcgacctcca cgtcgggata cgcggcgcgg agcgcggcga
      481 ggcccggcgg cacggcgcgg ctgtcgatca cgcgcacgcg ttcgcctcgc gcggacaaga
      541 aacgcgcgac tgcggccccg gtgtcaccga gcccgacgac gagactatgc tgcgccgtac
      601 tgcgcactgc tctctctttc tccaccactc ggccttcgcg gccgcggcgt gacagcatcg
      661 tcagcgtagc cgccagcgcc accatcaacg gatcttcaag ctcgcgagac cgatcaacac
      721 caaaatcacg gtgatgatcc aaaaccgcac gatcactttc ggctcgggcc aacccttgag
      781 ctcgaagtga tggtgtagcg gcgccatgcg aaaaatgcgc cggccggtca tcttgtagga
      841 ggcaacctgg atgatgactg agacggattc gacgacgaag actccgccca tgatgaacag
      901 caccagttct tgccgcaccg acaccgcgac gagccccagg gcggcaccga gtgcgagcgc
      961 accgatgtca cccatgaaga cctgcgcggg ataggtgttg aaccacaaga agcccaagcc
     1021 ggcgccagcc agggccgcac agaaaaccag tagctcgccg gaccccgcga catacgggat
     1081 cccgagatag gacgagtaga tcgagttgcc ggcggcgtac gcgaagatgc cgagcgccgt
     1141 gccgaccagc acggacggca tgatcgcgag cccgtcgagg ccgtccgtca gatttacacc
     1201 gttgctggcg ctgacgacga ccagcgtcgt gaacagcacg taacccacgg cgccgagtgg
     1261 aatggcgatt cccggaatgt acgggatcag cagcgcgtgc tcgaccggtg ggttttctgc
     1321 cgtaacgtaa aatccgaccg cgagcccgag tgcgccgacg gtctgccaga agatcttcgc
     1381 cttcgcgctc aacccttttg agttgcgcag gatgaccttc ttgtaatcgt cgacgaagcc
     1441 gatgaggccg aagaacaacg tgccgccgag cgtcaggagc acgaaacgat tcgtcaagtt
     1501 cgcccagagc aaggtgctga ccgcgatcgc aagcaagatc aacgcaccgc ccatcgtcgg
     1561 cgtcccggct ttcggaaagt ggctctcggg accgacctgg cgaatctgct ggccgatgcg
     1621 ttgcatcgtg aggcgctgga tcaggtacgg accgaacgca aacgacagca cgagcgccgt
     1681 gagcgcgccc aggatcgcgc gcgtcgtcag gtaggtgaag acgttgaagc ccgagtagaa
     1741 ctgcgtcagg taatcggtga cgtggatcag cactaggtcg ccctcgccga ctcgatctcg
     1801 agggtcttca ccagccggtc gagccccatg acccgcgagc ccttcacgag cacggtcacg
     1861 tccttcccaa gcagcgactc gagcgcgtcg cgtgcggctg cgatatccgc gagacggcgc
     1921 ccgtcggtgc cgaatgcagc cgcggcctcg ctcgccaaat cgccgatcgc gaacaagaga
     1981 tcgcagcgcc cgcgcgcgta ctcgccaatc tccttgtgca gc
//
LOCUS       DATCUD010000478         1831 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54501, whole genome shotgun sequence.
ACCESSION   DATCUD010000478 DATCUD010000000
VERSION     DATCUD010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54501"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1831)
                     /locus_tag="VIQ99_07035"
     CDS             complement(<1..>1831)
                     /locus_tag="VIQ99_07035"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182936.1"
                     /translation="ADVRLAAENERSYSRLNGQPGLMMQVQAQSKGNTLDIARGVRAE
                     VERMRDSLPPGTTLNVSVDNALPIEAALREVLIAVAFALTSVLAVIYLFLGNLRATLI
                     PAVTIPVSVIASLTVMYALGYSINVLTLLGLVLAIGLVVDDAIVVLENVHRRHELGEP
                     TLVAAITGSREIGFAVIATTLTLISVFVPISFLPGDLGRLFREFGFTLAASVAFSALI
                     ALTLTPMLASRLPEHERRNRFAAAMDRFFKALARLYERCLRTSVAHSWTVVGVLAVLI
                     GTGIVTFRSVPSEFTPQADNGRAFVAIEGPEGSSFEYIDRYARQLEAIALQHMGEGGD
                     VERILIRVPGQGGNDLRTGDINTARAFLIFKDWSERDRTAREIMEPVLAEARKLPGVR
                     VSMGMPGGLGRGGLQSPIVAVIGGPDYERLAVWSDQLLQLAQANPGLVNVQSNYKERK
                     PQIRVSIDRNRAADLGISLESVGRTLETVLGSRIVTTYIDRGREYNVILQGRDDIRET
                     TTDLTNIRVRSSRSDELIPLSSVVRLEETSGTLQLARFDRLRAIKISADLAPGYTMGE
                     AVQWFEEMVARELPAGATLSWDGQTREFTRTGQQLYFTFLLALA"
BASE COUNT          334 a          619 c          593 g          285 t
ORIGIN      
        1 ccgcgagcgc gagcaggaac gtgaaataca gttgctgacc ggtgcgcgtg aactcgcgcg
       61 tttgtccgtc ccagctcagc gtagcgccgg cggggagctc acgcgcgacc atttcctcga
      121 accactgcac cgcttcgccc atcgtgtaac ccggtgccag gtcggcggaa atcttgatcg
      181 cgcgcaaccg gtcgaacctg gcgagctgca acgtaccgga cgtctcctcg agccgcacca
      241 cgctcgagag cgggatcaac tcgtcggagc gcgacgaccg cacgcgaatg ttcgtcaggt
      301 ccgtcgtggt ctcgcgaatg tcgtcgcggc cctggaggat gacgttgtac tctcggccgc
      361 gatcgatgta agtcgtgacg atgcgcgagc cgagcacggt ctcgagcgtg cgccccacgc
      421 tctcgagcga gataccgaga tcggccgcac gattgcggtc gatcgacacg cggatttgcg
      481 gcttgcgctc tttataattg ctctgcacgt tcacgagccc cggattcgcc tgcgcgagct
      541 gcagcagctg atcggaccag accgcgagcc gctcgtagtc gggcccgccg atcactgcga
      601 cgatgggcga ttgcaggccg ccgcggccca ggccgccggg catgcccatc gagactcgca
      661 cgccgggcaa cttgcgcgcc tcggccagca cgggctccat gatttcccgc gccgtgcggt
      721 cgcgctcgct ccagtccttg aagatcaaaa atgcgcgagc ggtgttgatg tcgcccgtgc
      781 gaaggtcgtt gccgccctgg cccggcacgc gaatcagaat tcgctcgacg tcgccgccct
      841 cgcccatgtg ctgtagcgca atcgcctcga gctgccgcgc gtagcggtcg atgtactcga
      901 agctcgagcc ttccggccct tcgatggcga cgaacgcgcg accgttgtcg gcctgcggtg
      961 tgaactccga cggaacggag cggaacgtca cgatgcccgt gccgatcagc accgccagca
     1021 ctccgacgac ggtccacgaa tgcgcgacgc tcgtgcgcaa gcagcgctcg tacaaccgcg
     1081 caagcgcctt gaagaatcga tccatcgcgg ccgcgaagcg gttccggcgc tcgtgctcgg
     1141 gcagccgcga cgcgagcatc ggcgtcaacg tcagcgcgat cagcgcggag aaagcgacgg
     1201 acgcggccag cgtgaagcca aactcacgga acagcctgcc cagatcgccg ggcaagaacg
     1261 agatcggcac gaacacggag atcagcgtca gcgtcgtggc gatcacggcg aagccgattt
     1321 cgcgcgagcc cgtgatcgct gctacgagcg tcggctcgcc gagctcgtgg cgccggtgca
     1381 cgttctcgag caccacgatc gcgtcgtcga cgacgaggcc gatcgcgagc acgagaccga
     1441 gcagcgtcag aacgttgatg gagtagccga gcgcatacat caccgtcagc gaagcgatca
     1501 cggagaccgg aatcgtcacg gccgggatca acgtcgcacg cagattgccg aggaagagat
     1561 agatcacggc gagcaccgac gtcaatgcga acgccacggc gatgagcacc tcgcgcagcg
     1621 cagcctcaat gggcagcgcg ttgtcgacgc tgacattcag tgtcgtgccg ggcggcaggc
     1681 tgtcgcgcat ccgctcgacc tcggcgcgca caccgcgtgc gatgtcgagc gtgttgccct
     1741 tcgactgcgc ctgaacctgc atcatcagcc cgggctggcc gttcaaccgg ctgtaggacc
     1801 gttcgttctc ggccgccaaa cgcacgtcgg c
//
LOCUS       DATCUD010000479         3834 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11699, whole genome shotgun sequence.
ACCESSION   DATCUD010000479 DATCUD010000000
VERSION     DATCUD010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3834
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11699"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /gene="mraW"
                     /locus_tag="VIQ99_07040"
     CDS             <1..424
                     /gene="mraW"
                     /locus_tag="VIQ99_07040"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012641470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="16S rRNA
                     (cytosine(1402)-N(4))-methyltransferase"
                     /protein_id="HEY9182937.1"
                     /translation="KPLTTTRELAELVTAHAGRPTGRIHPATRVFQAIRIAVNDELTA
                     LERGLAQSLAVLMAGGRLVVISFHSLEDRIVKRFMAREARGDEAYAGLPNIPPHARPR
                     LKLVGKLVRPSAIEVERNPRARSARLRVAERTRLEQAA"
     gene            421..708
                     /gene="ftsL"
                     /locus_tag="VIQ99_07045"
     CDS             421..708
                     /gene="ftsL"
                     /locus_tag="VIQ99_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019398569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEY9182938.1"
                     /translation="MNRQVLELVGVLALAACVVASGVAIVSVEHRSRQLFIEGEKLNR
                     ELDQLQIDWGRLQIEQSTWAQHSRIESLARQRLRLTEPAEDQLVVVFEPKR"
     gene            713..2440
                     /locus_tag="VIQ99_07050"
     CDS             713..2440
                     /locus_tag="VIQ99_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008930970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEY9182939.1"
                     /translation="MRRTVKTTVAERARWRSAVLLAGFAFCALALEGRILYLQLVDKA
                     FLEQQANGRHLRTVQISAHRGSLTDRFGEPLAVSTPNESVYANPRELKDSLDRLSELA
                     AALDQDDEWLARRITSNLDREFVFLQRHVKPAMAGEVMKLGLPGIGTVREYGRYYPAG
                     EVTAHVIGFTDVDDRGQEGLEAAFDHWLKGENGSKRVMQDRRGQVFDDIELLRAPRPG
                     RDLRTSIDLRLQYLAYRELKAAVTQSRARAGSVVILDPSTGEVLAMVNQPSYNPNDRS
                     QYRPDHYRNRAVTDIFEPGSSFKPLVIAAALESGAYSPRSLIDTSPGALVINGRTITE
                     DKSKLGRVDLTTVLAQSSNVGAARVALTMEPQAIFDMVSAFGVGKLTDSAFPGESAGT
                     IDDPKHWRTVGQATLSYGYGVAVTTLQLARAYAAIAAEGTLRPVSLLALDGAPEGEQV
                     ISQSTAQNLTAMLEAVVAPPGTGQRAAVRNFHVAGKTGTTQKAGVGGYDSERHGAIFG
                     GYAPASQPRLVVVVMIDEPQGEEYYGGDIAAPVFANIVSGALRVLAVPPDALATPPLA
                     VVAQAQVKP"
     gene            2455..>3834
                     /locus_tag="VIQ99_07055"
     CDS             2455..>3834
                     /locus_tag="VIQ99_07055"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: protein motif:HMM:NF001126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY9182940.1"
                     /translation="MARRTLGDLLGSGAGNHARLAITDLALDSRQVRPGAAFVAVAGG
                     REHGLAYAREALERGAAVVLYEPSNVFVDPPEPSIAVPNLKARLGEIARAFYVAAVKP
                     TIVGVTGTNGKTTVAYLLAQALSQPQRPCGYVGTLGFGVPPKLNAHGLTTPDCLTLHR
                     ELAELGAPRIAMEVSSHALAQQRIAGLEFHTAVFTNLTRDHLDEHGDFASYGNAKRKL
                     FKVPGLQCAVLNADDAFAATIAADLAPGCKVVRTSLRDSAVELSGRLKRSDLGGVELD
                     IGGKFGTTRLSSSLIGAFNAENLLTALGALVAQGMQLPAACSALAAAKPAPGRMEVLG
                     GPPGKPWVVIDYAHTPDALQRVLTTLEAAATGELTCVFGCGGDRDRGKRALMGGVAAD
                     LADRIVLTDDNPRSEDPAAIVRDIRAGMDEHPRVNVIHDRRAALKTAIERARPGDVVL
                     VAGKGHESEQ"
BASE COUNT          641 a         1252 c         1330 g          611 t
ORIGIN      
        1 caagccgctg acgacgactc gcgagctcgc ggagctcgtg accgcgcatg cggggcgccc
       61 gaccggccga attcacccgg caacccgtgt ctttcaggcc atccggattg cagtcaacga
      121 cgagctcacg gcgctcgagc gcggtctcgc gcagagcctc gcggtgctga tggccggcgg
      181 gaggctcgtc gtgatcagct ttcattcgct cgaggaccgg atcgtgaagc gcttcatggc
      241 gcgcgaggcg cgcggagacg aggcgtacgc cggattgccg aacattccgc cccatgcgcg
      301 gccgcgtctc aagctcgtgg gcaagctggt gcgtcccagc gcgatcgagg tcgaacgcaa
      361 tccgcgtgcg cggagcgccc gactgcgtgt ggccgagcgc actcggctcg agcaagccgc
      421 atgaacaggc aagtcctcga gctcgtcggc gtgcttgcgc tcgccgcgtg cgtggtggca
      481 tcgggagtcg caatcgtgag cgtcgagcac cgctcgcggc agctgttcat cgaaggcgaa
      541 aagctgaatc gcgagctgga ccagctgcag atcgattggg gtcggctgca gatcgagcag
      601 agcacctggg cgcagcactc tcgaatcgag tcgctcgcgc gccagcgcct gcgtctcacg
      661 gaaccggccg aggatcaact cgtcgtcgtg ttcgagccca agcggtgacg cgatgaggcg
      721 cacggtcaag acaacggtgg cggaacgtgc tcgctggcgc agcgccgttt tgctggccgg
      781 attcgcgttt tgcgcgctcg cgctcgaggg ccgaatcctt tatctgcagc tcgtggacaa
      841 ggcctttctc gagcagcaag cgaacggccg gcatctgcgc acggtgcaaa tctccgcaca
      901 ccgcggctcg ttgaccgacc gtttcgggga gccgctcgcc gtcagtacgc cgaacgagtc
      961 cgtgtacgcg aacccgcgcg agctcaagga ttcgctggat cgcctgagcg agctcgcggc
     1021 tgcgctggac caggacgacg agtggctcgc acgccgtatc acgagcaatc tcgaccgcga
     1081 gttcgtattt ctgcagcggc acgtgaagcc cgcgatggcc ggtgaggtca tgaagctcgg
     1141 gttgccgggt atcggcacgg tgcgcgagta cggccgctac taccccgccg gcgaagtcac
     1201 ggcgcacgtg atcggcttca ccgacgtcga cgatcgcggg caggaaggac tcgaagccgc
     1261 gttcgaccat tggctcaagg gcgagaacgg cagcaagcgc gtcatgcagg atcgtcgcgg
     1321 gcaggtgttc gacgacatcg agctcctgcg cgcgccgcgg ccgggccgcg atctgcgcac
     1381 gagcatcgat ctgcgcctgc aatacctcgc gtatcgagag ttgaaggccg cagtcacgca
     1441 gagtcgtgcg cgcgcagggt cggtcgtgat cctcgatccc agcacgggcg aggtgttggc
     1501 gatggtgaat caaccgtcgt acaacccgaa cgaccgttcg cagtatcggc cggaccacta
     1561 tcgcaatcgc gccgtcaccg acatcttcga gcccggatcg agcttcaagc cgctcgtgat
     1621 tgcagcggcg ctcgaaagcg gcgcatacag cccgcgcagc ctgatcgata cgtcgccggg
     1681 agcgctcgtg atcaacggcc ggacgatcac cgaggacaag tcgaagctcg gccgagtgga
     1741 tctgaccacc gtgctcgcac agtcgagcaa cgtcggtgcg gcgcgtgtcg cattgacgat
     1801 ggagccgcag gcgatcttcg acatggtctc ggccttcggc gtgggcaagc tcaccgatag
     1861 tgcgtttcct ggcgagtccg ccggcacgat cgacgatccc aagcactggc gcaccgtggg
     1921 gcaggcgacg ctgtcatacg gatatggagt cgcggtcacg acgctgcagc ttgcccgtgc
     1981 ctacgcggct atcgctgcgg aaggcacgct gcgtcccgtg tcgctgctcg cgctcgacgg
     2041 cgcgccggag ggcgagcagg tgatctcgca gagcacggcc cagaatctga ccgcgatgct
     2101 cgaagccgtc gtggcgccac cgggcacggg gcagcgcgcc gcggtccgta acttccatgt
     2161 tgccggcaag acgggcacga cgcagaaagc cggcgtcggc ggctacgatt ccgagcggca
     2221 cggcgccatc ttcggcggct atgccccggc gagccagccg cggctggtcg tggtcgtgat
     2281 gatcgacgag cctcaaggcg aggagtacta cggcggcgac atcgccgcgc ccgtgttcgc
     2341 caatatcgtt tccggcgcgt tgcgcgtgct cgcagtgccg cccgacgcgc tggcgacacc
     2401 gccgctcgcg gtggttgcgc aagcgcaggt gaagccatga tggccgcgct cgccgtggct
     2461 cgcagaacgc tcggcgacct cctggggagc ggcgccggca accatgcgcg gctcgcgatc
     2521 acggacctcg cgttggacag ccgccaagtg cgtcccggcg ccgcgttcgt cgcggtggcg
     2581 ggcggccgcg agcacgggct cgcctacgcg cgtgaagcgc tggagcgagg ggcggcggtc
     2641 gtgttgtacg agccgagcaa cgtgttcgtc gatccaccgg agcccagtat cgcggtgccg
     2701 aatctgaagg cgcggctcgg cgaaatcgca cgcgcgttct acgtcgctgc ggtgaaaccg
     2761 acgatagtcg gggtcaccgg cacgaacggt aagacgaccg tcgcgtatct tctggctcag
     2821 gccttgagcc agccccagcg cccgtgcggc tatgtcggca cgctgggctt tggagttccg
     2881 ccgaagctca acgcccacgg gttgacgacg ccggattgcc tgaccttgca ccgtgagctt
     2941 gccgagctcg gtgcaccgcg catcgcaatg gaagtctcgt cgcacgcgct cgcgcagcag
     3001 cgtatcgccg gcctcgagtt ccacacggcc gtattcacga atctcactcg cgatcatctc
     3061 gacgaacatg gcgacttcgc gagctacggc aacgcgaagc gcaaactgtt caaagtgccg
     3121 ggactacagt gcgcggtgct gaacgcggat gacgcgtttg ccgcgacgat cgctgcggat
     3181 cttgcgccgg gctgcaaggt cgtgcggacg agcctgcgcg actcggctgt cgagttgtcg
     3241 ggacgtttga aacggtcgga tctcggaggc gtcgagctcg acatcggagg caaattcggc
     3301 acgacgcggc tctcatcgag cctgatcggc gcattcaatg ccgagaacct gctgaccgcg
     3361 ctcggcgcgc tcgtcgcgca agggatgcaa ctgccggcgg cttgttccgc gctcgcggcc
     3421 gccaagccgg ctccggggcg catggaagtg ctcggcggcc cgcccgggaa gccctgggtc
     3481 gtgatcgact acgcccacac tcccgacgcg ttgcagcgtg tgttgacgac gctggaagct
     3541 gccgcgaccg gcgagctcac gtgcgtgttc ggctgcggcg gggatcgcga ccgcggcaag
     3601 cgtgcgttga tgggcggcgt cgccgcggat ctcgcggatc gcatcgttct gacggacgac
     3661 aatccgcgta gcgaagatcc cgccgcgatc gtgcgcgaca tccgcgccgg tatggatgag
     3721 cacccgcgcg tgaacgtgat ccacgaccgc cgcgccgcac tgaagacggc gatcgaaaga
     3781 gcgcgtcccg gtgacgtcgt gctcgtcgcg ggcaaggggc acgagtccga gcaa
//
LOCUS       DATCUD010000480         1788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18989, whole genome shotgun sequence.
ACCESSION   DATCUD010000480 DATCUD010000000
VERSION     DATCUD010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18989"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1788)
                     /locus_tag="VIQ99_07060"
     CDS             complement(<1..>1788)
                     /locus_tag="VIQ99_07060"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9182941.1"
                     /translation="SSILRTAIAALLAAPAVAVAQAQPQPDPGALEEITVTGTRIIRS
                     GMVTPVPTTAVQAEELSSMAAGPMFDSLVQLPPFFANQAPEQVNGGQNSGGSNLNLRG
                     AGLNRTLVLLDGRRMVPTNRFGAVDVAMFPEELVSSVEVVTGGASASYGTDAVAGVVN
                     FILDTDFEGFKSHAQMGATKYGDGDTYEAGFAFGIRAGERGHLIGSLELFDVDQISDF
                     GALQERSFYNNLARVTNPATTGPALLVRPNVSPTNWNQTGLINAPGTPLDKLVFNPDG
                     TTSTLAFSGIGQLNGGCNCQSEPTRSFGSDVDNEVAAGNERQTLFLHYSNEITDNVTF
                     YGQVLAGHNEVTDRRENISFILTWAPRLFATNAYLPPSIATQIATAGIGSVADQPATY
                     PRYVNFALFGVNDGNHGLPDVRQITKNDLLSTTVGFDVELNRDGFLDGWRIESYYQHG
                     DNEQAFDTDNGIRVDRIPLAFDAVINPANGQPACYSALVNPAVFGDCVPMNILGGVQN
                     ISPAARAYIVDDYKHAVQDTQQDFVEFLMTGDLWDGWGAGAIAGAFGASYRSEELDQS
                     TPDPTDEFPATPSGVLLETLGVIPVGTRG"
BASE COUNT          280 a          586 c          610 g          312 t
ORIGIN      
        1 aaccgcgcgt tcccaccggg atcacgccga gggtctcgag caggacgccg ctcggcgtcg
       61 ccgggaactc gtccgtcggg tccggagtac tctggtcgag ctcctcggag cgatacgacg
      121 caccgaacgc acctgcaatc gcacccgcgc cccacccgtc ccagaggtcg cccgtcatca
      181 ggaactcgac gaagtcctgc tgcgtgtcct gcaccgcgtg cttgtagtcg tcgacgatgt
      241 aggcgcgggc tgcgggcgag atgttctgca cgccgcccag gatgttcatc ggcacgcagt
      301 cgccgaacac ggccgggttc accagcgcgg agtagcacgc gggctggccg ttcgcgggat
      361 tgatcacggc gtcgaacgcg agcggaatgc ggtcgacgcg gataccgttg tcggtatcga
      421 atgcctgctc gttgtcgccg tgctggtaat acgactcgat gcgccagccg tcgaggaaac
      481 cgtcgcggtt cagctcgacg tcgaaaccga cggtcgtcga gagcaagtcg ttcttcgtga
      541 tctggcgaac gtccgggagc ccgtggttgc cgtcgttgac cccgaacaat gcgaagttca
      601 cgtagcgtgg gtacgtagcg ggctggtccg ctaccgagcc gatcccggct gtcgcgatct
      661 gcgtggcgat gctcggcggc aaataggcgt tcgtcgcgaa cagccgcggc gcccaggtca
      721 ggatgaacga gatgttttcg cgccggtccg tcacctcgtt gtggccggcc agcacctgcc
      781 catagaacgt gacgttgtcc gtgatctcgt tcgagtagtg caggaacagc gtctggcgct
      841 cgttgccggc cgcgacctcg ttgtcgacgt cggagccgaa actgcgagtg ggctccgact
      901 ggcagttgca gccgccgttc agctggccga tgccgctgaa cgcgagcgtc gacgtggtgc
      961 cgtctggatt gaacacgagc ttgtcgagcg gcgtgccggg cgcgttgatc aggccggtct
     1021 ggttccagtt cgtcgggctc acgttcggcc gcacgaggag cgcgggcccg gtcgtggccg
     1081 gattcgtgac gcgcgccaag ttgttgtaga acgagcgctc ctgcagcgca ccgaagtcgc
     1141 tgatctgatc gacgtcgaac agctcgagcg agccgatcag gtgaccgcgc tcaccggccc
     1201 taatgccgaa cgcgaagccg gcctcgtacg tgtcgccgtc gccgtacttc gtcgcgccca
     1261 tctgcgcgtg gctcttgaag ccctcgaagt ccgtgtcgag gatgaagttc acgacgcccg
     1321 cgacggcatc ggtgccatag ctggccgacg cgccgccggt cacgacctcg acgctgctca
     1381 cgagctcctc ggggaacatc gcgacgtcga cggcgccgaa gcgattcgtc ggcaccatgc
     1441 gccgcccgtc cagcagcacg agcgtgcgat tcagacccgc gccgcgcaga ttcaggttcg
     1501 agccgcccga gttctggccg ccgttgacct gctcgggcgc ctgattcgcg aagaacggcg
     1561 gcaactgcac gagcgaatcg aacatcgggc ccgcggccat gctgctcagc tcttccgctt
     1621 gcacggccgt cgtcggcacc ggcgtgacca tgcccgagcg gatgatgcgc gtgccggtga
     1681 ccgtgatctc ttcgagcgcg cctggatccg gttgcggctg cgcctgcgcg acggcgaccg
     1741 cgggtgcggc gagcagcgcg gcgattgcgg tacggaggat ggagcttc
//
LOCUS       DATCUD010000481         1738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_18992, whole genome shotgun sequence.
ACCESSION   DATCUD010000481 DATCUD010000000
VERSION     DATCUD010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18992"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..278
                     /locus_tag="VIQ99_07065"
     CDS             36..278
                     /locus_tag="VIQ99_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007511575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HEY9182942.1"
                     /translation="MNPRDIAALIEQNLTGATADVQTDGQGHYEATVVCAEFAGKRSL
                     QRHQMVYATLGTRVGREIHALALKTFTPEEWQSGSR"
     gene            303..1562
                     /gene="murA"
                     /locus_tag="VIQ99_07070"
     CDS             303..1562
                     /gene="murA"
                     /locus_tag="VIQ99_07070"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011587846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEY9182943.1"
                     /translation="MDKLAIVGGKALDGDVLISGAKNAALPILAATLLAEGRVTVANV
                     PRLNDIATMLKLLRRTGVVALHRDDGSVDVDAAAIKEFIAPYELVKTMRASILVLGPL
                     LGRFGHADVSLPGGCAIGARPVNLHVAGLRAMGAQITIDNGYIRARAPRLHGARLVLD
                     TVTVTGTENLMMAAACAAGETVIENAAREPEIGELAAFLAAMGAKIEGAGSDTIHIQG
                     VTGLTAASHEVMPDRIESGTYLVAAAITGGRVKLIRTRPEHLDAVLQKLSEAGAEVTV
                     GPDWIELDMRGRRPKAVDIKTAPYPAFPTDMQAQFCALNAVAEGTGTITETIFENRFQ
                     HVLELQRLGANLSIQGNTVIARGVERLTGAPVMATDLRASASLVLAGLAAEGTTIVDR
                     IYHVDRGYERIELKLGGLGADIRRVAR"
BASE COUNT          305 a          557 c          609 g          267 t
ORIGIN      
        1 tagactacgg ctccccaacg tcgactggcc tcaagatgaa tccgcgcgac atcgccgcct
       61 tgatcgagca gaacctgacc ggcgccacgg ccgacgtgca gacggacggc cagggccatt
      121 acgaggcgac agtcgtctgc gcagagttcg cgggcaagcg cagcttgcag cggcaccaga
      181 tggtatacgc gacgctcggc acgcgggtcg gccgcgagat tcacgcgctg gctttgaaga
      241 ctttcacgcc ggaagagtgg cagagcggtt cacgatgacg tggcggtcga tccgagtgcg
      301 acatggataa gctcgcgatc gtcggcggca aagctctcga cggcgacgtg ttgatctcgg
      361 gagccaagaa cgcggcgttg ccgattctcg ccgcgacgct attggccgag ggtcgcgtga
      421 ccgtcgccaa cgtgccccgc ttgaacgaca tcgcgacgat gctgaagctg ctgcgccgga
      481 ccggcgtcgt cgccctgcac cgcgacgatg gcagcgtcga cgtcgacgcc gcggccatca
      541 aggagttcat cgcgccatac gagctcgtga agacgatgcg tgcctcgatc ctggtgctcg
      601 gtccgttgct cgggcgcttc ggccacgcgg acgtgtcgtt gccgggcggc tgcgcgatcg
      661 gagcacggcc cgtgaacctt cacgtcgcag gtctgcgcgc gatgggcgcg cagatcacga
      721 tcgacaacgg ctacatccgt gcgcgcgcgc cgcgcctgca cggtgcgcgg ctcgtgctcg
      781 acaccgtgac ggtgacgggc acggagaacc tgatgatggc ggcggcgtgc gcggccggcg
      841 agacagtcat cgagaacgcc gcgcgcgagc cagagatcgg cgagctcgcg gcattcctcg
      901 cggcgatggg cgcgaagatc gaaggcgccg gctccgatac gattcatata caaggagtga
      961 ccgggcttac ggccgcgagt cacgaagtga tgccggaccg aatcgagagc ggcacgtacc
     1021 tcgtcgcggc ggcgatcacg ggcggccgag tgaagctgat tcgcacccga ccggagcatc
     1081 tcgacgccgt gctccagaag ctctcggaag cgggtgcgga ggtcaccgtc gggccggact
     1141 ggatcgagct cgacatgcgc gggcggcggc ccaaggccgt cgacatcaag accgcgccgt
     1201 acccggcgtt tccgaccgac atgcaggcgc agttctgcgc attgaatgcg gtcgcagagg
     1261 gcacggggac gatcaccgag acgatcttcg agaatcgttt ccagcacgtg ctcgagctgc
     1321 agcggttggg agcgaatttg tccattcagg gcaataccgt gatcgcacgc ggcgtcgagc
     1381 ggctgacagg cgcacccgtg atggccacgg acctccgcgc atcggcgtca ctcgtgctcg
     1441 cgggcctcgc ggccgagggc acgacgatcg tggaccggat ctatcacgtc gaccgcgggt
     1501 acgagcgcat cgagctcaag ctcggggggc tcggagccga catccggcgc gtagcgcgtt
     1561 gaccgtcaat cgccggcgat cggcggcggc cgttcctcga gcacggcttc cgtctcgaac
     1621 tgcgtcccgc gcgcgcgcgt aaagcggatg cgaatgcgtt ggccgggctg cgagctcgcg
     1681 acgaaattca gcgcctgctg acccgtgaac atgcgctcgt cgttcaagtg cgtgagca
//
LOCUS       DATCUD010000482         2116 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97238, whole genome shotgun sequence.
ACCESSION   DATCUD010000482 DATCUD010000000
VERSION     DATCUD010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2116)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2116)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2116
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97238"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..278)
                     /locus_tag="VIQ99_07075"
     CDS             complement(<1..278)
                     /locus_tag="VIQ99_07075"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012511647.1"
                     /note="Catalyzes the reversible hydrolysis of the amide
                     bond within dihydroorotate. This metabolic intermediate is
                     required for the biosynthesis of pyrimidine nucleotides;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY9182944.1"
                     /translation="MSTLQLVNAQLVNEGRTFAADVLIRDDRIERIGAGPAPAGTKTI
                     DLAGKHLLPGLIDDQVHCREPGLTHKATLATESLAALCGGVTSFLDMP"
     gene            complement(286..1242)
                     /gene="pip"
                     /locus_tag="VIQ99_07080"
     CDS             complement(286..1242)
                     /gene="pip"
                     /locus_tag="VIQ99_07080"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019467409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEY9182945.1"
                     /translation="MSQREQYPPIEPFDHGYLAVGDGHEIYYEQSGNPRGKPALFVHG
                     GPGGGGDVNARRFFDPSGYRIVVFDQRGSGRSRPHASLEANTTWHLVSDMEQLRRHLG
                     IERWLVFGGSWGSTLALAYAETHPTSVTELVLRGIFLLRKVEIDWFYQFGASMLFPEQ
                     WREYLAPIPPAERGDLLAAYHRRLLSNDAGTRLEAARAWSIWEAATSSLEPNPAREEQ
                     FGAPEFALALALIEAHYFVNRGFMTHENQLLDGVDKIRSIPAVIVQGRYDVVCPIDTA
                     WELHTRWPEADFRVVVAAGHSAYEPGITSELVAATDRFKKAT"
     gene            1442..>2116
                     /locus_tag="VIQ99_07085"
     CDS             1442..>2116
                     /locus_tag="VIQ99_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003283767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182946.1"
                     /translation="MIEVQGLTKEYGRFRAVDDLSFKVAPGEVLGFLGPNGAGKTTTM
                     RIVAGFLPPTAGRVTVCGHDIETAAVQAKRRVGYLPEGAPSYPEMTPRSFLEFIAEAR
                     GIPPDQRRKRLDEVIGLLHLDRVLEQSIDTLSKGYRRRVGLAQAIVHDPEVLILDEPT
                     DGLDPNQKHEVRELIGRMAKSKIIVISTHLLEEVEAVCNRAIIIARGKILADDTPRGL
                     EQRSRFY"
BASE COUNT          373 a          707 c          664 g          372 t
ORIGIN      
        1 ttcggcatgt cgagaaagct cgtgactccg ccacacagcg ccgcgaggga ctccgtcgcg
       61 agcgtggcct tgtgcgtgag ccccggctcg cggcagtgca cctggtcgtc gatcaggccc
      121 ggcaacagat gcttgcctgc aaggtcgatg gtcttcgtcc ccgcgggcgc gggtcccgcg
      181 ccgatacgct cgatgcgatc gtcccggatc aggacatccg ccgcgaacgt ccgcccttcg
      241 ttcacgagtt gcgcattgac caactgaagc gtgctcatgc cgtccctagg ttgccttttt
      301 gaaccgatcc gtggccgcga cgagctcgga cgtgataccg ggctcgtacg ccgagtgccc
      361 ggctgcgacg acgactctga aatccgcctc aggccagcga gtgtgcaact cccacgccgt
      421 gtcgatcgga cacacgacgt cgtagcgacc ttgcacgatc acggccggta tcgagcgaat
      481 cttgtcgact ccgtccagca gctggttctc gtgggtcatg aaaccgcgat tcacgaaata
      541 gtgagcctcg atgagtgcga gagccaacgc gaattccggc gcgccgaact gctcctcgcg
      601 cgccgggttc ggctcgagcg agctcgtggc cgcttcccag atcgaccagg ctcgcgccgc
      661 ctcgagacgc gtcccggcat cgttgctcaa gagacgccgg tgatacgcgg ccaacagatc
      721 gccgcgctcg gcgggcggga tcggcgccaa gtactcccgc cactgctccg ggaacaacat
      781 gctcgcgccg aactgataaa accaatcgat ctcgaccttg cgcagcagga aaattccgcg
      841 caggacgagc tccgtgacgg acgtcggatg cgtctcggca tatgcgagcg cgagcgtgct
      901 gccccaggac ccgccgaaca cgagccatcg ctcgatccct aggtgtcggc gcagctgttc
      961 catgtccgac acgaggtgcc aggtcgtatt cgcctcgagc gaggcgtgcg gccggctgcg
     1021 ccccgagccg cgttggtcga acacgacgat ccggtagccg ctgggatcga agaaccggcg
     1081 cgcgttgacg tcgccgcctc cgcccggccc gccgtgcacg aacaacgcgg gcttgccgcg
     1141 cggattaccc gactgctcgt agtagatctc gtgaccgtcg ccgaccgcga ggtaaccgtg
     1201 gtcgaacggc tcgatcggtg ggtattgctc gcgttgactc atgaagattg cagcggtgcc
     1261 cgagtcggtg tccgcgctta tagtactctc ccgctcccgc gcggaacttt gcttcggcca
     1321 cctagcatcg aagcagtttg tagctcagcg gcatgaacct tcggtaactt gaaacgaatt
     1381 cggcccgtat gctaaatgtt ccgccgctcg gcgactcgcc gctgcgatta gcaactttcc
     1441 gatgatcgaa gtccaaggtc tcaccaaaga gtacggtcgt tttcgtgcgg tagacgatct
     1501 gagcttcaag gtcgcgccgg gcgaagtgct cgggttcctg ggcccgaacg gcgccggcaa
     1561 gaccacgacg atgaggatcg tcgcgggctt ccttccgccg acggccggtc gcgtgacggt
     1621 ctgcggtcac gatatcgaga ccgcagcggt gcaggcgaag cgccgcgtcg gctatctgcc
     1681 cgagggcgcg ccaagctatc ccgagatgac gccgcggtcg ttcctcgagt tcatcgccga
     1741 ggcgcgcggt attccgccgg accagcggcg caaacggctc gacgaggtca ttgggctgct
     1801 gcatctcgac cgcgtgctcg agcaaagcat cgacaccttg tcgaagggtt accggcgccg
     1861 agtcggtctt gcccaagcca tcgtgcacga ccccgaggtg ctgatcctcg acgagccgac
     1921 cgacggcctc gatccgaacc agaagcacga ggtccgcgag ctcatcgggc gcatggccaa
     1981 gtcgaagatc atcgtgatct cgacgcactt gctcgaagag gtcgaggccg tttgcaaccg
     2041 cgccatcatc atcgcgcgcg gcaagattct cgccgacgac acgccgcgcg gcctcgagca
     2101 gcgctcgcgc ttctat
//
LOCUS       DATCUD010000483         1552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54572, whole genome shotgun sequence.
ACCESSION   DATCUD010000483 DATCUD010000000
VERSION     DATCUD010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54572"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..799)
                     /locus_tag="VIQ99_07090"
     CDS             complement(<1..799)
                     /locus_tag="VIQ99_07090"
                     /inference="COORDINATES: protein motif:HMM:NF012876.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY9182947.1"
                     /translation="MSLFWKIFISFMVAMTITSVGAIYVTYQIVSRPLTQTEFEGRDR
                     IIRAVSEALARGGERELKAWLFSNPRPARGTVLLVTNERGDELLGRAMPRELRALLNF
                     RPPGRRPDRPANFQGVQLTPMITGPDGEEYRLLFARAPVTIFGILMWPGTSVAVLSIA
                     LLAAAVVSLALARYLSLPIVRLQKASRSLAAGALDTRVGAPVTRRGDEVGKLARDFDA
                     MAEHIQALVTAKETLLRDVSHELRSPLARIRMALALAERRAGEASQPD"
     gene            complement(803..1501)
                     /locus_tag="VIQ99_07095"
     CDS             complement(803..1501)
                     /locus_tag="VIQ99_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9182948.1"
                     /translation="MADHRLLIIDDDVRLSEMLVEYLAPEGIELTPVASGIQGLRSAQ
                     RENYDLIVLDVMLPGLSGFDVLKQLRESGSKTPVLMLTARGDDVDRIVGLDLGADDYL
                     PKPFNPRELLARVKAILRRTSEPEGDEPVELTVGQLRVNLRRREAWLGEQALKLTNAE
                     FVILVTLMRSPGDVVSREALTRTALGRQLLPDDRSLDTHISNLRRKLGSDADADVLIR
                     SIRGSGYVLVPPEA"
BASE COUNT          275 a          531 c          508 g          238 t
ORIGIN      
        1 ggtcgggctg cgatgcctca cccgcacgcc gctccgcgag cgcgagcgcc atgcggatgc
       61 gcgcgagcgg cgaacgcagc tcatgcgaga cgtcgcgcag caacgtctct ttcgcggtga
      121 ccaacgcctg gatgtgctcg gccattgcgt cgaaatcccg cgcgagcttg ccgacctcgt
      181 cgccgcgccg agtgaccggg gctccgacac gcgtgtcgag agcgccggct gccagcgagc
      241 gactggcctt ttgcaggcgc acgatcggca atgacaaata acgcgcgagc gccaacgaca
      301 cgacggcagc cgcgagcagc gcgatcgaga gcaccgcgac cgacgtgccg ggccacatca
      361 ggatgccgaa gatcgtcacc ggcgcgcgag cgaacaacaa ccgatactcc tcgccgtcgg
      421 gacccgtgat cattggcgtc agctggacgc cttggaagtt cgcgggccgg tcggggcgcc
      481 ggcccggcgg gcgaaagttc agcaacgcgc gcagctcgcg cggcatcgca cggccgagca
      541 gctcgtcgcc gcgctcgttc gtcacgagca gcacggtgcc gcgggccggc cgcggattgc
      601 tgaagagcca ggcttttagc tcgcgctcgc cgccgcgagc gagcgcctcc gaaacagcgc
      661 ggatgatcct gtcgcgtccc tcgaactcgg tctgcgtcaa cggccggctc acgatctggt
      721 atgtcacgta gatcgcgccc accgacgtga tcgtcatggc gaccatgaac gagatgaaga
      781 ttttccagaa caggctcacg cgtcacgcct ccggcggcac gagcacgtag ccgctgccgc
      841 ggatgctgcg aatcagcacg tcggcatcgg cgtcgctgcc gagcttgcgg cggaggttgc
      901 tgatgtgggt atcgaggcta cggtcgtccg gcagcagttg gcgcccgagc gccgtgcgcg
      961 tcaacgcctc gcgcgacacg acgtcgccgg gcgagcgcat cagcgtcacg agaatcacga
     1021 actctgcgtt cgtgagcttc aacgcttgct cgccgagcca cgcttcgcgg cggcgcaagt
     1081 tcacgcggag ttggcccacg gtcaactcga cgggctcatc gccctcgggc tcggacgtgc
     1141 ggcgcaggat cgctttcacg cgcgcgagca gctcgcgcgg attgaacggt ttcggcagat
     1201 agtcgtcggc gcccaagtcg agacccacga tgcgatcgac gtcgtcgccg cgagccgtca
     1261 gcatcagcac gggcgtcttc gatccgctct cgcgcagttg cttcagcacg tcgaagccgg
     1321 acaaccccgg cagcatcacg tcgagaacga tcagatcgta gttctcgcgc tgcgcactgc
     1381 ggaggccttg aatgccggac gcgaccggcg tcagctcgat gccttccgga gccaaatact
     1441 ccacgagcat ctcggagaga cgcacgtcgt cgtcgatgat caataggcgg tgatcagcca
     1501 cattcctgcc cctcagtggt cgacaaaact gccacaaatc ccggtgtggc cc
//
LOCUS       DATCUD010000484         1908 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61300, whole genome shotgun sequence.
ACCESSION   DATCUD010000484 DATCUD010000000
VERSION     DATCUD010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61300"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(255..1139)
                     /gene="rdgC"
                     /locus_tag="VIQ99_07100"
     CDS             complement(255..1139)
                     /gene="rdgC"
                     /locus_tag="VIQ99_07100"
                     /inference="COORDINATES: protein motif:HMM:NF016281.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEY9182949.1"
                     /translation="MFRSVRFYSVSSAWPDTEQELSERLATAAFKPCGAYTERSAGFE
                     PPSGDDEAPLVRRVAGVDLMRLRNQARVLPAAAIDEALEVRIAEYRHRMQEEPGRRTK
                     RKLKEQTRDELLPKALLKSDRTTLLYIGGENVLAVGTASESRAESVLERLRAAFGKLD
                     VEPLAFERPVEGVLARIFGGDPPRKFKLGRECRMRDRADAKGSVRWQEIDLAQASVRR
                     FVKDGMELTHLGIEFDGTLSAVLAADGTLGKLKLLGLDEPADDAAEEPLARLDAELAL
                     IGGTLRQLIEGLRTALGN"
     gene            complement(1224..>1908)
                     /locus_tag="VIQ99_07105"
     CDS             complement(1224..>1908)
                     /locus_tag="VIQ99_07105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182950.1"
                     /translation="IPAAVSVLVLVLFVRDPPPAPAPRPAQHRASRTRLGGLSASFWW
                     LVLVATLFTLARFSEAFLILKSVDVGLGATYVPAVLVVMNVAYAVSAYPAGWLSDRVN
                     RWGVFALGAALLIGADLVLAFGTTIATTAIGIVLWGLHMGFTQGLLAALVSDATSAER
                     RGTAFGVFNFVTGIALLAASVLAGILWDRGGPTLTFLAGAALTAFAGLVASALHRAGK
                     IDGRRAETA"
BASE COUNT          318 a          642 c          665 g          283 t
ORIGIN      
        1 agcacgaccg tggccgcgat tccgtacacg gcgtccatcc gcagcacgct gcgcgcagat
       61 gcgaccgtca gttcgctctt cagcacgacg agctcgatca tcagcgccgc gaatacgacg
      121 acgaatgcca ggtgatgtaa gaatgcgagc gtgatcgtgg ccgtcatgag gtttctccgc
      181 tgcgagtgcg cagtgtagct cgccgcggaa aacttcgacc cgttcgtcgc gcaccttggg
      241 ttgaaatcag tgatctaatt gccgagggct gtgcgtagac cctcgatcag ttgccgcagc
      301 gtgccgccga tcagcgcgag ctcggcgtcg aggcgcgcga gcggctcttc cgcggcatca
      361 tcggccggct cgtcgagccc gagcagcttg agcttgccga gtgtgccgtc ggccgcgagc
      421 accgcgctca gcgtgccgtc gaactcgatg ccgagatgcg tgagctccat tccatccttg
      481 acgaagcggc gcacgctcgc ttgggcgagg tcgatctcct gccagcgcac cgagcccttt
      541 gcgtcggcac ggtcgcgcat gcggcattcg cggccgagct tgaatttgcg cggcggatcg
      601 ccgccgaaga tccgcgcgag cacgccctcg accggccgct cgaacgcgag cggctcgacg
      661 tcgagcttgc cgaatgcggc gcgcaggcgt tcgagcacac tctcggcccg cgactccgag
      721 gccgtgccga cggccagcac gttctcgccg ccgatgtaga gcagcgtcgt gcgatcggac
      781 ttgagcagcg ccttcggcag cagctcgtca cgcgtctgct ccttgagctt gcgtttggtg
      841 cggcggcccg gctcttcctg catgcggtgt cgatactcgg cgatgcgcac ctcgagcgct
      901 tcgtcgatcg cggccgccgg caacacgcgc gcctgattcc gcaagcgcat caggtcgacg
      961 ccggcgacgc ggcgcacgag cggcgcttcg tcgtcgccgc ttggcggctc gaagcccgcg
     1021 ctccgctccg tgtaggcgcc gcagggcttg aatgcggcgg tcgcgagacg ttcggacaac
     1081 tcttgctcgg tgtcgggcca cgcgctcgac acggaataga aacggacgct gcggaacatc
     1141 ggtgaggctg acgcctggcg gcaaggggcg ggcagtatcg cgattcgtgg cgtgtctgtc
     1201 gatggcccgg gacgagcggg agactatgcc gtttcggcgc gtcggccgtc gatcttgccg
     1261 gcgcggtgca gcgcgcttgc gacgagaccg gcgaacgccg tgagcgcggc gcccgcgagg
     1321 aacgtcagcg tcggtccgcc gcgatcccac aagatgccgg ccagcacgct ggctgcgagc
     1381 agcgcaatgc cggtgacgaa gttgaagact ccgaacgccg tgccccggcg ctcggcggac
     1441 gtggcgtcgg agacgagtgc cgcgagcagg ccttgcgtga agcccatgtg cagcccccac
     1501 aagacgatgc cgatggccgt cgtagcgatc gtcgtcccga aggcgagcac gagatcggcg
     1561 ccgatcagaa gtgcggcgcc gagcgcgaac acgccccagc gattcacgcg gtccgagagc
     1621 cagccggcag ggtaggccga gactgcatag gcgacgttca tcacgacgag caccgcgggc
     1681 acgtacgtgg cgccgagccc gacgtcgacg ctcttcagaa tcaggaacgc ctcgctgaaa
     1741 cgcgcgagcg tgaacaacgt cgcaacgagc acgagccacc aaaacgacgc gctcaacccg
     1801 ccgagccggg tgcgcgaggc ccgatgctgc gcggggcgtg gcgccggcgc cggcggcgga
     1861 tcgcggacga acagaacgag caccagcacc gacacggcgg ccgggatg
//
LOCUS       DATCUD010000485         2944 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5170, whole genome shotgun sequence.
ACCESSION   DATCUD010000485 DATCUD010000000
VERSION     DATCUD010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5170"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1137)
                     /locus_tag="VIQ99_07110"
     CDS             complement(<1..1137)
                     /locus_tag="VIQ99_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182951.1"
                     /translation="MRRHSHICGAVVACALATPLAFAQEPPAPTETATALRTRLEAAG
                     ATIRSIRITVDNVFDLNNPEENKRLYRWANNVHVPTRESVIEDILLFKAGDPFVARVL
                     DESARAIRARGFIAEATVEPGTYDAATNSVDVEVRVRDSWSLQFDLKLNHTGGETEWG
                     IGLSENNLFGTGKTLEIGHESEIDRDQTTLGYGDGNVFGSRVRLHARVSHASDGHLRE
                     LDVARPFFALATRWSVGSALYDQERVDTMYDLGEEIDEFQHDLAGFELSGGWSYSPRE
                     RSAARWLVGIAGEDHAFRPTPEVPIPLLLPPDRKLVYPWLGWQRVEDDYREMSELNDM
                     GRTEDISLGFNVFGNVGFAKESYGSDRDATLFRVALEKGWEPGGP"
     gene            complement(1205..2299)
                     /locus_tag="VIQ99_07115"
     CDS             complement(1205..2299)
                     /locus_tag="VIQ99_07115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019366518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEY9182952.1"
                     /translation="MDVRLTRNAIAVPLLAAWLTVPAHAETIRQWQFAPQGESFELAL
                     REVEAPTPSRGEVAVRVRAASLNRRDLMMVEGRYGRGGTQPNSVPLSDGAGEVIAVGA
                     DVTRFKVGDRVAGIFFEQWIDGAPTAAALATARGGNSGGMLSEVVVTNADALVSIPDH
                     LTYEEAATLPCAGVTAWVGLFKRGQLKAGDFVLLEGTGGVSVFGLQLAAAAGAKPIIT
                     SSSDVKLARARELGAFGTVNYRTHADWQHEVRALTGGAGVDQVLEVGGQDTLPRALEA
                     LAYGGHVAIIGGLSGFASDVPVGTLMGLNATASGIYVGSRADFEALNAFLSEHKIKPI
                     VDKVFELTDAKAAFAAMDSGEFFGKVVIRL"
     gene            complement(2277..2816)
                     /locus_tag="VIQ99_07120"
     CDS             complement(2277..2816)
                     /locus_tag="VIQ99_07120"
                     /inference="COORDINATES: protein motif:HMM:NF014600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY9182953.1"
                     /translation="MTGVELFADLGIPSDYGRKPQRPRFAEAVELVDVEPNIVGVAQK
                     LAPETALAWHKMKQTAALAGVQLLLVSGFRSIRHQADLIRRKLSAGQAIDAILLVNAA
                     PGFSEHHTGRAIDVATPGTRPLTAEFESSKAFAWLEANAATFGFRMPYPRGNRFGFEY
                     EPWHWSQLEGNTHGRSSHS"
BASE COUNT          488 a         1015 c          955 g          486 t
ORIGIN      
        1 ggggccgccg ggctcccagc ctttctccaa cgcgacgcgg aacagcgtcg cgtcgcgatc
       61 cgagccgtag ctttccttgg cgaagccgac gttgccgaac acgttgaagc cgagcgaaat
      121 gtcctcggtt cggcccatgt cgttgagctc gctcatctcg cgataatcgt cttcgacacg
      181 ctgccaaccg agccacgggt acacgagctt gcggtccggc ggcagcagca gcggtatcgg
      241 cacttccggc gtgggacgaa aggcatggtc ctcgcccgcg atgccgacca gccaacgcgc
      301 cgcgctacgc tcgcgcgggc tgtacgacca gccgccgctt agctcgaacc ccgcaaggtc
      361 gtgctggaac tcgtcgatct cctcgcccag gtcgtacatc gtgtcgacac gttcttggtc
      421 atacagggcg ctgccgaccg accagcgcgt cgcgagcgca aagaacggtc gcgcgacatc
      481 gagctcgcgg agatggccgt cgctcgcgtg ggagacccgc gcatggagcc gtacgcggct
      541 accgaacacg ttgccgtctc cgtagccgag cgtcgtctgg tcacggtcga tctcgctctc
      601 gtggccgatc tcgagcgtct tgccggtgcc gaatagattg ttctcggaaa gcccgatgcc
      661 ccactcggtc tcgccgccgg tgtggttcag cttcaggtcg aactgcagcg accacgaatc
      721 gcggacgcga acctcgacgt cgacgctgtt cgtcgccgcg tcatacgtgc cgggctcgac
      781 ggtcgcctcg gcaatgaagc cgcgcgcgcg gatcgcacgt gccgattcgt cgagcacccg
      841 cgccacgaac gggtcgccgg ctttgaacag caggatgtcc tcgatcacgc tctcgcgcgt
      901 gggaacatgc acgttgttcg cccagcggta gagccgcttg ttttcctcgg ggttgttcag
      961 gtcgaaaacg ttgtcgaccg tgatccgaat cgagcgaatc gtggcgcccg ctgcttccag
     1021 ccgtgtgcgc agcgcggtcg cggtttccgt gggcgcgggg ggttcctgcg cgaacgcaag
     1081 cggcgtcgcg agcgcgcacg cgaccacggc accacagatg tgcgaatgtc ggcgcatggc
     1141 gttcgagggt agctgcgcgg cggcgcgaag agtgtgccgc gccgcccaaa tcaggcggcg
     1201 cccctcacag gcgaatcacg accttgccga agaattcgcc gctgtccatt gcggcgaaag
     1261 cggctttcgc atcggtcagc tcgaagacct tgtcgacgat cggcttgatc ttgtgctcgg
     1321 acagaaacgc gttcagcgct tcgaagtccg cgcgtgagcc gacatagatg ccgctcgcgg
     1381 tggcattcaa gcccatcaac gtgccgaccg gcacgtcgct ggcaaagccg gacaacccgc
     1441 cgatgatcgc gacgtgcccg ccgtacgcga gcgcctcgag cgcacgcggc agcgtgtcct
     1501 ggcctccgac ctcgagcacc tgatcgacac cggcaccccc cgtgagcgca cggacctcgt
     1561 gttgccagtc cgcatgcgtc cgatagttca cggtgccgaa cgcgccgagc tcgcgagcgc
     1621 gcgcgagctt gacgtcgctc gagctcgtga tgatcggctt cgcgcccgcg gcggcggcga
     1681 gctgcagccc gaagaccgat acgccgcccg tgccttcgag cagcacgaaa tcgccggcct
     1741 taagttgccc gcgcttgaac agcccgaccc aggccgtcac accggcgcac ggcagcgtcg
     1801 cggcttcctc gtacgtgagg tgatcgggaa tcgatacgag cgcgtcggcg ttcgtgacca
     1861 cgacctcgga gagcatgccg cccgagttgc cgccgcgcgc ggtggccaat gcggccgcgg
     1921 tcggtgcgcc gtcgatccac tgctcgaaaa agatgccggc gacgcgatcg ccgactttga
     1981 aacgcgtgac gtccgctccg accgcaatca cttcgccggc accgtccgac agcggcacgc
     2041 tgttcggctg cgtgccaccg cggccgtacc gtccctcgac catcatcaag tcgcgccgat
     2101 tcaacgacgc ggcgcgcacg cgcacggcga cctcgccgcg cgagggtgtc ggcgcttcga
     2161 cctcgcgcaa cgcgagctcg aacgactcgc cctgcggcgc gaactgccat tgccgaatcg
     2221 tctccgcatg cgcgggcacg gtgagccatg ccgccagcaa cggaacggcg attgcgttac
     2281 gagtgagacg aacgtccatg cgtatttcct tctagttgcg accagtgcca cggctcgtac
     2341 tcgaagccga aacggttacc gcgcgggtac ggcatccgaa agccgaacgt cgccgcattc
     2401 gcttcgagcc aagcgaaggc cttcgagctc tcgaactcgg ccgtcagcgg gcgagtgccg
     2461 ggcgtcgcaa cgtcgatcgc ccgacccgtg tggtgctcgc tgaatcccgg cgcggcgttg
     2521 accaacagaa tcgcatcgat cgcttgaccg gcgctgagct tgcgccgaat caggtcggcc
     2581 tgatggcgga tgctgcggaa ccccgagacg agcagcaact gcacgcctgc gagcgccgcc
     2641 gtctgcttca tcttgtgcca cgcaagggcg gtctccggcg cgagtttttg cgcgactccg
     2701 acgatgttcg gctcgacgtc gacgagctcg acggcttccg cgaagcgcgg ccgctgcggc
     2761 ttccgcccat agtcgctcgg tatgcccaga tctgcgaaca gctcgacgcc ggtcatggcc
     2821 ggagtgtact accgagcctg cgtaacgggc gacgcggcgg tcagaagcgc caggttgcgg
     2881 tcgatttgcg atactgccgc catggcgaga tcaggcaagc cacggcgccg gccgatcgcg
     2941 cgga
//
LOCUS       DATCUD010000486         2778 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33293, whole genome shotgun sequence.
ACCESSION   DATCUD010000486 DATCUD010000000
VERSION     DATCUD010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2778)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2778)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2778
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33293"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..308
                     /locus_tag="VIQ99_07125"
     CDS             <1..308
                     /locus_tag="VIQ99_07125"
                     /inference="COORDINATES: protein motif:HMM:NF025226.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9182954.1"
                     /translation="AGADINAKITDDSSRTANVGRQPNAVTERKGQTALYGAAKNGWA
                     SVVEHLLAKGADPTVSDALGRTPVDAALGRIAGRGNVVSEEIAATLRAARGESITAR"
     gene            395..1114
                     /locus_tag="VIQ99_07130"
     CDS             395..1114
                     /locus_tag="VIQ99_07130"
                     /inference="COORDINATES: protein motif:HMM:NF016241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF481 domain-containing protein"
                     /protein_id="HEY9182955.1"
                     /translation="MRMLAGVLLCAVSGAVCAQAPAPPPDPLIGAVALGYLSTKGNTD
                     STNANAKFDAAWDLDGPWKHIWSALAITARTDGITTAESYSAGYKGQRDLASMASYIF
                     AAGDWRQDRFSGYDQQISETVGYGRRLIDNERHVLAIEGGAGAKQSELVDGTSLDEAI
                     VRGGLDYLLHIGESSQFTQKLIIEQGDDNRYTESTSALKAQVVGNIALVLSYVIKSNS
                     DVPVGIEKTDRFTSISLEYAF"
     gene            complement(1111..1455)
                     /locus_tag="VIQ99_07135"
     CDS             complement(1111..1455)
                     /locus_tag="VIQ99_07135"
                     /inference="COORDINATES: protein motif:HMM:NF023014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3240 family protein"
                     /protein_id="HEY9182956.1"
                     /translation="MIESSGLVAVTLDLAPALEERVVDWLLSREDVETFTSRGIQGHG
                     SARHELSIAEQVSGRQRRVELRIELAAAVVDGWLAALAETFGGGDVRYSVVPIIRSGR
                     LHELRPPTPSSG"
     gene            complement(1448..>2778)
                     /locus_tag="VIQ99_07140"
     CDS             complement(1448..>2778)
                     /locus_tag="VIQ99_07140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017364658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9182957.1"
                     /translation="AILARVPEVARIVARVGSDEIGMDPMGLNESDMFLVLRPRNEWH
                     AGSKTDVVDAIRAVVDEFPGMAYGFTQPIEMRTAEMLTGTRGDVAVKLFGPDLVALGT
                     RAEEIATVLRGIAGSEDVFVARNSGMQYLNVAVDRTAAGRLDLQATDLQRILRAQIEG
                     LPIGIVQEGVRRTPLVIRASEDVRGSARSFAALPLTIGDGRSVPVSAVAEVERIEGVV
                     SVARERGQRFIVVRSNVVGRDLVGFVDEAKQRVAEAVELPPGYFVQWGGQFENQQRAA
                     ARLALVVPVAIGLVFMLLFSTFGSVRQALLVLTNVPFALIGGVLALLVTREYLSVPAS
                     VGFIALLGIAVLNGVVMVTYFNQLRAEGLPAREIVISGAQRRLRPVLMTASIAAVGLV
                     PLLFATGPGSEIQRPLAIVVIGGLISATALTLFLLPILYERFGLERGASD"
BASE COUNT          504 a          989 c          898 g          387 t
ORIGIN      
        1 ccgcgggcgc cgacatcaac gccaagatca cggacgacag cagccgcacg gcgaacgtcg
       61 gccggcaacc caacgcggtc accgagcgca aaggtcaaac ggcgctgtac ggtgcggcga
      121 agaacggctg ggccagcgtc gtcgagcatt tgctcgcgaa gggtgcggac ccgaccgtca
      181 gcgacgcgct cggcaggacg ccggtcgacg ccgcgctcgg gcgaatcgcc ggtcgcggga
      241 acgtcgtctc cgaggaaatc gccgcgacgc tgcgggccgc gcgcggcgaa tcgatcaccg
      301 ctcgctaggc gccgcgccgg cgcgcccgtg gcagacgcgc gaccatggcg gtaacatgcc
      361 gcctcttcat ccttcctcgg cggagaatcg aaccatgcga atgcttgccg gcgtcctgtt
      421 gtgcgcggtt tccggagcgg tgtgcgcgca ggcccctgca cccccgcccg atcccttgat
      481 cggcgcggtc gcgctcggct atctgtcgac gaagggcaac accgacagca cgaacgcgaa
      541 cgcgaagttc gacgcggcct gggatctcga tggaccgtgg aagcatatct ggagcgcgct
      601 cgcgatcacg gcccgcaccg acggcatcac gacggccgag tcgtattcgg ccggctacaa
      661 aggccaacgc gatttggcgt cgatggcaag ctacatcttc gcggccggcg actggcgcca
      721 ggatcgattc tcgggctacg accagcagat ctccgagacg gtcggctacg gccgcaggct
      781 gatcgacaac gagcgtcatg tgctcgcgat cgaaggcggc gcgggcgcca agcagtcgga
      841 gctcgtcgac ggcacgagcc tcgacgaggc gatcgtgcgc ggcgggctcg actatctgct
      901 ccacatcggc gagagctccc agttcacgca gaagctgatc atcgagcaag gcgacgacaa
      961 ccgttacacg gaatcgacgt cggcgctgaa ggcgcaggtc gtcggcaaca tcgcgctcgt
     1021 gctgtcgtac gtgatcaaga gcaactccga cgtgccggtc ggcatcgaga agacggaccg
     1081 cttcacttcg atctcgctcg agtacgcgtt ctagccggag ctcggcgtag gcggccgcag
     1141 ctcgtgcagc cggccggagc ggatgatcgg cacgaccgag tagcgcacgt cgccgccgcc
     1201 gaaggtctcg gccaacgctg ccagccaccc gtcgacgacg gctgcggcca gctcgatccg
     1261 cagctcgacg cggcgttgcc ggccgctgac ctgctcggca atgctgagct cgtggcgagc
     1321 ggagccgtgg ccctggatgc cgcggctcgt gaacgtctcg acatcctcac gcgacaacaa
     1381 ccaatcgacg acgcgctcct ccaacgcggg ggccaggtcc agcgtcacgg caaccaaccc
     1441 cgacgactca atcactggcg cctcgctcga ggccgaagcg ctcgtagagg atcggcaaca
     1501 ggaagagcgt gagcgcggtt gccgagatga gcccgccgat cacgacgatc gcgagcggcc
     1561 gctggatctc cgagcccggg ccggtcgcaa acaacaaggg caccagaccg actgccgcga
     1621 tgctcgccgt catgagcacg ggccgcagcc ggcgttgcgc gccgctgatc acgatctccc
     1681 gcgccggcaa cccttcggct ctgagctgat tgaagtacgt gaccatgacc acaccgttca
     1741 acacggcgat gccgagcagt gcgatgaaac ccacggatgc cggcaccgac aggtattcgc
     1801 gcgtgacgag cagcgcgagg acgccgccga tcagcgcaaa cggcacgttc gtcagcacga
     1861 gcaacgcctg gcgtacggac ccgaaggtcg agaacagcag catgaacacg agcccgatgg
     1921 cgaccggcac gacgagcgcc aagcgggccg ccgcccgttg ctggttctcg aactgcccac
     1981 cccactgcac gaagtagccc ggtggcagct cgacggcctc ggctacgcgt tgcttggcct
     2041 cgtcgacgaa gccgaccaaa tcgcgcccca cgacgttgct gcgcaccacg atgaaccgct
     2101 ggcccctctc gcgcgccacg gacacgacgc cctcgatgcg ctcgacctcc gcgacggcgc
     2161 tcacgggcac cgagcgaccg tcgccgatcg tgagcggcaa ggccgcaaaa ctccgcgccg
     2221 agccgcgcac gtcctcgctg gccctgatca cgagtggagt gcgccgcacg ccctcttgca
     2281 cgatcccgat cggtaacccc tcgatctggg cgcgcaagat ccgctgcaga tccgtcgcct
     2341 gcaaatcgag ccgcccggcg gccgtgcggt cgacggcgac gttcaagtac tgcatgccgc
     2401 tgttgcgtgc gacgaacacg tcctcgctgc ccgcgatccc gcgcagcacg gtggcgatct
     2461 cctccgctct ggtcccgagc gcgacgagat cggggccgaa caacttcacg gcgacgtccc
     2521 ctcgtgtgcc cgtcagcatc tccgccgtcc gcatctcgat gggctgcgtg aagccgtagg
     2581 ccatgcccgg aaactcgtcg acgacggcac ggatcgcgtc gacgacatcg gtcttcgagc
     2641 cggcatgcca ctcgttgcgc ggcctcagca cgaggaacat gtccgactcg ttcaggccca
     2701 tcgggtccat tccgatctcg tcggagccga cgcgcgccac gatcctggca acttccggta
     2761 cgcgcgccag gatcgcct
//
LOCUS       DATCUD010000487         1810 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_82981, whole genome shotgun sequence.
ACCESSION   DATCUD010000487 DATCUD010000000
VERSION     DATCUD010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82981"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /gene="gmd"
                     /locus_tag="VIQ99_07145"
     CDS             complement(<1..826)
                     /gene="gmd"
                     /locus_tag="VIQ99_07145"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011312288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008446 - GDP-mannose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY9182958.1"
                     /translation="MSGRGQAKKALITGITGQDGAYLAEFLLDKGYEVHGVKRRASSF
                     NTDRIDHLYRDPHEPDRRMILHYGDLTDATNLIRIVQEVQPDEIYNLAAQSHVAVSFE
                     TAEYTANSDALGTLRLLEAIRICGLGKKTRFYQASSSEMFGKVAETPQRETTPFYPRS
                     PYAAAKVYAYWVTVNYREAYGLFACNGILFNHESPVRGETFVTRKITRGLARIKAGLD
                     DCLYLGNLEALRDWGHARDYVRAQWLMLQQPQPEDYVIATGEQHSVRDFVTRAAEAL"
     gene            complement(816..>1810)
                     /locus_tag="VIQ99_07150"
     CDS             complement(816..>1810)
                     /locus_tag="VIQ99_07150"
                     /inference="COORDINATES: protein motif:HMM:NF012936.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9182959.1"
                     /translation="MIADVPLGFFLSGGVDSSVVVAAAASTGRRVATFSIGFDADDVS
                     ETPFAREVATRFATDHHERILSQAHAQELLPKLKSWFDEPFADESAMPTYLVCSAARE
                     HVTVVLTGDGGDEVFGGYRTYPRYARYARYPTWPPAMERLTYALRKPFARQHGVSRTL
                     MLLETAFADGPNLWAKLMGGMSTPAKRDYARELGVPRDYDDWWHYREFWRDDLPLKTR
                     LQYVDFHTFMPGLVLTKVDRTSMAVSLEARVPLLARRVIEFSFGIQEDLRYHGGEPKG
                     LLRHAYRGILPDHILDRRKKGFGIPRYYLKDLSGGRFIQEHVLRSLYLGASLER"
BASE COUNT          323 a          567 c          599 g          321 t
ORIGIN      
        1 cgagcgcctc cgcggcgcgc gtaacgaagt cgcggacgga atgctgctcg ccggtcgcga
       61 tcacatagtc ctcaggctgc ggctgctgca gcatcagcca ctgggcgcga acgtagtcgc
      121 gcgcgtgacc ccagtcgcgc agggcttcga ggttgcccag gtagagacag tcgtcgaggc
      181 cggccttgat ccgagcgagg ccgcgcgtga tcttgcgcgt cacgaacgtc tcgccgcgca
      241 cgggcgactc gtgattgaac aggatgccgt tgcacgcgaa cagtccgtac gcttcccgat
      301 aattgacggt gacccagtac gcatacactt tcgcggccgc gtaaggggag cgcggataga
      361 acggtgtcgt ctctcgttgc ggtgtctcgg cgactttgcc gaacatctcg gagctcgacg
      421 cctgatagaa gcgcgtcttc ttgccgagcc cgcaaatcct gatcgcctcg agcaagcgca
      481 acgtgccgag cgcatcggag tttgccgtgt attcggcggt ttcgaacgac actgcgacgt
      541 ggctctgcgc cgcgagattg tagatctcgt ccggttgaac ctcctgcacg atgcgaatca
      601 gattggtcgc atcggtcaag tctccgtaat gcaggatcat gcgccgatcc ggctcgtgcg
      661 gatcgcggta caggtgatcg atacggtcgg tgttgaacga cgacgcgcgg cgcttcacgc
      721 cgtggacctc atagcccttg tcgagcagga attccgcgag gtaggcaccg tcctggccgg
      781 tgatgccggt gatcaacgcc ttcttggctt gccccctacc gctcaaggga ggctccgaga
      841 tacaagctgc gcaacacgtg ctcctgaatg aaacggccgc cgctcaagtc cttcaaatag
      901 taccgaggaa tgccgaagcc cttcttgcga cggtcgagaa tgtggtccgg caggatgccg
      961 cgatacgcgt gtcgcagcaa gcccttcggc tcgccgccgt ggtagcgcag atcctcctga
     1021 atgccgaacg agaattcgat gacgcggcgc gcgagcaagg gcacgcgggc ttcgagggac
     1081 acggccatgc tcgtgcgatc gaccttcgtg agcacgaggc ccggcatgaa cgtgtgaaag
     1141 tccacgtact gtaggcgggt cttgagtggc aaatcgtcgc gccagaactc gcggtagtgc
     1201 caccagtcgt cgtagtcgcg cgggacgccg agctcgcgcg cgtagtcgcg tttggccggc
     1261 gtcgacatgc ctcccatgag cttggcccac aaattcggcc cgtcggcgaa cgccgtttcg
     1321 agcagcatca gggttcggct gaccccgtgc tggcgcgcga acggcttacg caacgcgtac
     1381 gtgaggcgct ccatggccgg cggccaggtc gggtagcgcg cgtagcgcgc gtagcgcgga
     1441 taggtgcgat agccgccgaa gacctcgtcg ccgccgtcgc cggtcagcac gacggtcaca
     1501 tgctcgcgcg cggccgagca gacgaggtag gtcggcatcg cggactcgtc ggcgaacggc
     1561 tcgtcgaacc acgacttcag cttcggcagc agctcctgtg catgtgcctg cgagagaatc
     1621 cgttcgtggt ggtcggttgc gaatcgcgtc gcaacctcgc gtgcaaacgg cgtctcggac
     1681 acgtcgtcgg catcgaagcc gatcgagaac gtggcgacgc gtcggcccgt gctcgcggct
     1741 gccgcgacga cgacgctgga gtcgactccg ccggacagaa agaatccgag cggcacatcg
     1801 gcgatcatct
//
LOCUS       DATCUD010000488         2675 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54665, whole genome shotgun sequence.
ACCESSION   DATCUD010000488 DATCUD010000000
VERSION     DATCUD010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2675
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54665"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VIQ99_07155"
     CDS             complement(<1..245)
                     /locus_tag="VIQ99_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182960.1"
                     /translation="MTMNRRYAGKIDRARLVAAGMATAALLGVGEAAIARPRTSAELV
                     QPEAASVLAPAQRGISLGQATAMAQSQFPGRVVRAAT"
     gene            complement(338..925)
                     /locus_tag="VIQ99_07160"
     CDS             complement(338..925)
                     /locus_tag="VIQ99_07160"
                     /inference="COORDINATES: protein motif:HMM:NF017269.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HEY9182961.1"
                     /translation="MLTKTFLATATAVLGFLGATSALADHGHNGRGKGHAYRYGYAPA
                     VVYARVVDVEPLVRHVTVNRPREQCWNEVVHEPVRPYGVAGPTVAGSIIGAAIGRQFG
                     DGNGRDALTVMGAVAGGAVAHQRAVRNGAGATREVTVQRCEVVNDRVTEQVIDGYLVT
                     YRYDGRNYTIETDRHPGSSIQVAVDVRPVGYRVRS"
     gene            complement(1070..1552)
                     /locus_tag="VIQ99_07165"
     CDS             complement(1070..1552)
                     /locus_tag="VIQ99_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020701377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsinothricin resistance N-acetyltransferase
                     ArsN1 family B"
                     /protein_id="HEY9182962.1"
                     /translation="MIRACRLSDAAQICAIYNHHVLNTVVTFEETPVSVDEMARRIGA
                     VTEKWPWLVWEEQGTTAGYAYAAMWKERSAYRFSVESTVYVAEDLVRRGIGAALYRAL
                     LPDLKQRGAHYVIGGIALPNAASVALHEKLGFEKIGHFKEVGFKHGRWVDVGYWALIL
                     "
     gene            complement(1561..2364)
                     /gene="mazG"
                     /locus_tag="VIQ99_07170"
     CDS             complement(1561..2364)
                     /gene="mazG"
                     /locus_tag="VIQ99_07170"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002517194.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEY9182963.1"
                     /translation="MTANADAAPLAELLRIMAKLRDRDGGCPWDLEQTFATIAPYTIE
                     EAYEVADAIERGDLVALKDELGDLLFQVVFHARMAQEAGAFDFADVAAAICAKMLRRH
                     PHVFGDQRVADSAEQTQRWEEIKREERGAAPASGSVLDDVPVGLPALTRAAKLGKRAA
                     SVGFDWPDVAGVRAKVDEELAELDAASAAGDAREIEAEVGDVLFSIANWCRHVNVDPE
                     ACLRGANERFTRRFRAVESEVGSSGRGWKDFDAAALDELWRRAKSRGRQ"
     gene            complement(2348..>2675)
                     /locus_tag="VIQ99_07175"
     CDS             complement(2348..>2675)
                     /locus_tag="VIQ99_07175"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEY9182964.1"
                     /translation="VGLAPDAVEVLGSLDGFLTGTGFTITPVVGHVTDPSFVAAPDPR
                     EVASVFEVPLEVILDRSAMGVGYFERHGSRLLTYELHFESRRIWGATAAVLRNFQDVI
                     LDDSER"
BASE COUNT          439 a          968 c          844 g          424 t
ORIGIN      
        1 atcgtcgcgg cgcgcacgac acgccccggg aactggctct gcgccatcgc cgtcgcctgc
       61 cccagcgaga tgccgcgctg agcaggcgcg agcacggaag cggcctccgg ctggacgagc
      121 tcggccgacg tgcgcggccg cgcaatagcg gcctcgccga cgccgagcaa cgcggccgtg
      181 gccatgccgg cggccacgag gcgcgcccgg tcgatcttcc ctgcgtagcg tctgttcatc
      241 gtcatcgtcg aagcttggag gcgcgcagca gccttcgtca aggaaagcgc cgcgcgcaaa
      301 aggacgggcg ggcccttcgg cccgcccgcg acgtcgctca agatcgcact cggtatccga
      361 ccggacgcac gtcgaccgcg acttggatcg agctaccggg atgccggtcg gtctcgatcg
      421 tgtaattgcg gccgtcgtac cgatacgtca ccagatagcc gtcgatgacc tgctccgtca
      481 cgcgatcatt cacgacctcg caacgctgga ccgtcacctc acgtgtcgca cccgcgccat
      541 tccgcacggc acgttgatgc gcgaccgcgc cgccggcgac tgcgcccatc accgtcagag
      601 cgtcgcgccc gttgccgtcg ccgaactggc gaccgatcgc ggcaccgatg atgctgccgg
      661 cgaccgtcgg gccagccacg ccgtacggac ggacgggctc gtggacgact tcgttccagc
      721 actgttcgcg cgggcgattg acagtgacgt ggcgcaccag cggctccacg tcgacgacac
      781 gcgcgtaaac gactgccggg gcgtagccgt agcggtatgc gtgacccttg ccgcggccgt
      841 tatggccatg gtcggccagc gcgctcgttg cgccgagaaa ccccaacacc gcagtggcag
      901 tggccagaaa cgttttcgtc aacatggcag ctctccttgc gttccgaccc cgacagcggg
      961 atcttggagc gcaggttaga gcccacgcga tgaatcgaac ctgaatgccc gcggggccgc
     1021 gccggccttg cggagttgcc ctaatcaggc ggtcgcgacg ggcgccgcct cagaggatca
     1081 acgcccaata cccgacgtcc acccagcggc cgtgcttgaa gccaacttct ttgaaatgcc
     1141 cgattttttc gaagcctagc ttctcgtgca gcgcgacgct cgcggcgttc ggcagggcga
     1201 tgccgccgat gacatagtgc gcgccgcgtt gcttgaggtc gggcagcagc gcgcggtaca
     1261 acgctgcgcc gatgccgcgt cgcaccagat cttccgcgac gtacaccgtg ctctccacgg
     1321 agaaccgata cgccgaacgc tccttccaca tcgccgcgta cgcatagccg gcggtcgtgc
     1381 cctgctcttc ccacacgagc cacggccact tttcggtgac ggcgccgatc ctgcgcgcca
     1441 tctcgtcgac ggacaccggc gtctcctcga acgtgaccac ggtgttcaga acgtgatggt
     1501 tgtagatcgc gcagatctgc gccgcatcgg acaaccggca ggctctaatc atggttgcgc
     1561 tcactggcgt cctcggctct tcgcacgccg ccacagctcg tccagcgcag cggcgtcgaa
     1621 atccttccaa ccgcggcccg agcttccgac ttcgctttcg accgcccgga accggcgcgt
     1681 gaatcgctcg ttcgcgccgc gcaggcaggc ctcgggatcc acgttcacgt gtcggcacca
     1741 attcgcgatc gagaacaaca cgtccccgac ctcggcctcg atttcgcgcg catcgccggc
     1801 cgcagacgcc gcatcgagct cggcgagctc ctcgtcgacc ttcgctcgga cgccggccac
     1861 gtcgggccaa tcgaagccga ccgacgcggc acgcttgccg agcttggccg cacgcgtgag
     1921 cgccggcaac ccgacgggca cgtcgtcgag cacactgccg cttgcaggcg ccgcgccgcg
     1981 ctcctcgcgc ttgatttcct cccagcgctg cgtctgctcc gcgctatcgg cgacgcgctg
     2041 gtcgccgaac acgtgcgggt gacggcgcag catcttggcg cagatcgccg cggcgacgtc
     2101 cgcgaaatcg aatgcgccgg cctcttgcgc catgcgcgca tggaatacga cctgaaacag
     2161 caggtcgccg agctcgtcct tcagagcgac gagatcgccg cgctcgatcg catcggcgac
     2221 ctcgtaggct tcctcgatcg tgtacggcgc gatcgtcgcg aacgtctgct cgagatccca
     2281 tgggcaaccg ccgtcgcggt cgcgcagctt cgccatgatt cgcagcaact ccgcgagtgg
     2341 cgcggcatca gcgttcgctg tcatcgagta ttacgtcctg gaagttgcgg agcacggccg
     2401 cggtggcgcc ccagatacgc cggctctcga agtgaagctc ataggtcaag aggcgcgagc
     2461 cgtggcgctc gaaatagccg acccccatgg cgctgcgatc gaggatcacc tcgagcggaa
     2521 cctcgaatac gctcgcgacc tcgcgcggat ccggtgcggc gacgaacgac gggtccgtca
     2581 cgtggccgac cacgggcgtg atcgtgaacc ccgtgcccgt gaggaagccg tcgagcgagc
     2641 ccaacacctc gaccgcgtcc ggcgcgagcc cgact
//
LOCUS       DATCUD010000489         2192 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19150, whole genome shotgun sequence.
ACCESSION   DATCUD010000489 DATCUD010000000
VERSION     DATCUD010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2192)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2192)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2192
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19150"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VIQ99_07180"
     CDS             complement(<1..1004)
                     /locus_tag="VIQ99_07180"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9182965.1"
                     /translation="MKFLPLVWAGLWRKRVRTALAMLSVAIAFWLYGTLDGVTAAFGD
                     ALTAMTSDVRMRTQNRQYVRAGLPIAHRQRIESVHGVRDVGVVMFVGGYYRDSIDLVE
                     VAAIDIERIDAGINLDVDPAHVEAMRKVRTGAIIGPELVTRYGWKVGDRVTIRSPVWT
                     KADGSNEWTFDIVGVYGIPEGAFPADSNFYINYDYFDEERTFAKGTVTFYTLRIDDGD
                     RAAAICAQIDALFANSADETLTQSELDFFTAQVERVGNIGFLVNSIIAAVLFALLFVT
                     GNTMMQSIRERVPELAVLKTYGFSNLAVSSLVFAEAALMCVTSAIIGLSVAKVLFPTM
                     "
     gene            complement(1001..1696)
                     /locus_tag="VIQ99_07185"
     CDS             complement(1001..1696)
                     /locus_tag="VIQ99_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008433690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9182966.1"
                     /translation="MANIVSMKGVVKAYVRGKQRVEVLRGIDLDVEQGEFLALMGPSG
                     SGKTTLLNLIGGLDRPDRGEITVAGERIDSLSAGRLTKWRARHVGFIFQFYNLLPVLT
                     AERNVEVPLLLTNPNAKVRLRNVTAALTLVGLADRAKHKPGELSGGQQQRVAIARALV
                     SDPSVLVCDEPTGDLDRETSDSILSLLQLLNREHGKTIVMVTHDPRAAERASRRLYVD
                     KGVLGHESLGHVA"
     gene            complement(1710..>2192)
                     /locus_tag="VIQ99_07190"
     CDS             complement(1710..>2192)
                     /locus_tag="VIQ99_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007183483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9182967.1"
                     /translation="EAKTRYDAAQAALYVATRAVEVAEASLAVAQRNLDDTVVRAPFA
                     GIVTVKAAQEGEMVSPVSAGGGFTRTGIGSIVDMESLEVEVDVSESFISRVETGQPVS
                     ITLNAYPDRRMPGHVLAIIPTADRAKATVKVRVAFDERDAGVLPEMGARVAFLANEQP
                     "
BASE COUNT          377 a          746 c          697 g          372 t
ORIGIN      
        1 aacatcgtcg ggaacagcac tttcgcgaca ctcaagccga tgatcgccga cgtcacgcac
       61 atcaatgcgg cctccgcgaa cacgagcgag ctcacggcca ggttgctgaa gccataggtc
      121 ttcagcaccg caagctccgg cacgcgctcg cggatcgact gcatcatcgt gttgccggtc
      181 acgaacagca gcgcgaacaa cactgcggcg atgatcgagt tcacgaggaa accgatgttg
      241 ccgacacgct cgacctgtgc tgtgaagaag tccagctcgc tctgagtcag cgtctcgtcg
      301 gccgagttcg cgaacaatgc gtcgatctgc gcgcagatcg cggcggcgcg gtccccgtcg
      361 tcgatgcgca gcgtgtagaa cgtcacggtg cccttcgcga acgtgcgttc ttcgtcgaag
      421 tagtcgtagt tgatgtagaa gttgctgtcg gccgggaacg cgccctccgg tatcccgtag
      481 acgccaacga tgtcgaacgt ccactcgttg gagccgtcgg ccttggtcca tacgggcgag
      541 cgaatcgtaa ctcgatcgcc gaccttccag ccatagcggg tcacgagctc cggcccgatg
      601 atcgccccgg tgcgcacctt ccgcattgcc tcgacgtgcg ccgggtcgac gtccaggttg
      661 atgccggcat cgatgcgctc gatatcgatc gcggcgacct cgacgaggtc gattgaatcc
      721 cgatagtagc cgccgacgaa catgaccacg ccgacgtcgc gcacgccgtg aaccgactcg
      781 atccgctggc gatgtgcgat cggcagcccg gcacgcacgt actggcggtt ctgggttcgc
      841 atgcgaacgt cgctcgtcat cgcggtcaga gcgtcgccga atgccgcggt gacaccgtcg
      901 agcgtgccat acagccagaa cgcgatcgcg acggatagca tcgcaagcgc cgtgcgaacg
      961 cgcttgcgcc agaggccggc ccacacgagc ggcaggaact tcatgccacg tgaccgagcg
     1021 actcgtggcc gagaacgccc ttgtcgacgt agaggcgccg cgacgcgcgc tcggcggcgc
     1081 gcggatcgtg cgtgaccatc acgatcgtct tgccgtgctc gcggttcagc agctgcaaca
     1141 ggctcagaat cgagtccgag gtctcgcggt cgaggtcgcc cgtgggttca tcgcacacga
     1201 gcaccgaagg gtcgctgacg agcgcacgcg cgatcgcgac gcgctgctgc tggccgcccg
     1261 acagctcgcc gggcttgtgc ttggctctgt ccgcgagccc gaccagtgtc aacgcggccg
     1321 tgacattgcg gagccgaacc ttcgcgttcg ggttcgtcag cagcaacggc acttcgacgt
     1381 tgcgctcggc cgtgagcacg ggcagcaggt tgtagaactg gaagatgaag ccgacgtgac
     1441 gagcgcgcca cttcgtgagc cggcccgccg acagcgaatc gatgcgctcc ccggccaccg
     1501 tgatctcgcc gcggtcaggc cggtcgaggc cgccgatcag gttcagcagc gtggtcttgc
     1561 cggagcccga cgggcccatc agcgcgagga attcgccctg ctcgacgtcg agatcgatgc
     1621 cgcgcagcac ttcgacgcgc tgcttgccgc gcacatacgc cttcacgaca cctttcatcg
     1681 agacgatgtt ggccatcgac ggctcctctt tatggttgtt cgttcgcgag gaatgcgact
     1741 cgcgcgccca tctcgggcaa tacgccggcg tcgcgctcgt cgaacgccac tcgcaccttc
     1801 actgtggcct tcgcgcgatc ggcggtcgga atgatcgcga gcacgtgccc cggcatccgc
     1861 cggtccggat acgcgttcaa cgtgatcgaa acgggttgac ccgtctcgac acggctgatg
     1921 aagctctcgc tcacgtcgac ctcgacctcg agagactcca tgtcgacgat cgagccgatg
     1981 ccggtgcgcg tgaatccgcc gccggccgac acgggcgaca ccatctcgcc ctcctgcgcg
     2041 gccttcacgg tcacgatgcc ggcgaacggc gcacgcacga ccgtgtcgtc gaggttgcgc
     2101 tgcgcgacgg cgaggctcgc ctcggcaacc tcgaccgctc gcgtcgcgac gtagagcgcc
     2161 gcctgcgcgg cgtcgtagcg cgtcttggcc tc
//
LOCUS       DATCUD010000490         3454 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97405, whole genome shotgun sequence.
ACCESSION   DATCUD010000490 DATCUD010000000
VERSION     DATCUD010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97405"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VIQ99_07195"
     CDS             complement(<1..475)
                     /locus_tag="VIQ99_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018285123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9182968.1"
                     /translation="MSRGIPILLAAQFLTAFADNAILFTAIAMLFESPRGDWYVPALQ
                     SSFLVAFVVLAPWVGTFADRRPKPHVLMLGNVLKAAGAGLMFVGVEPMAAYALVGAGA
                     AVYGPAKYGILPELVGTARLVRANGWIEGSTIVAIVLGSAVGSRVADHSASYALFT"
     gene            complement(472..2646)
                     /locus_tag="VIQ99_07200"
     CDS             complement(472..2646)
                     /locus_tag="VIQ99_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017366142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9182969.1"
                     /translation="MSLGRWLLRTVLRLVYRVRVTGLEHYAGAGKRVLVIANHTSFLD
                     AALLAVFLPDRLTFAVNTEIAKRWWMRPLLAIVDAFPLNPTNPYSLKSLIRYIEQDKR
                     AAIFPEGRITVTGSLMKIYPGPGLVADKSGAMLLPVRIEGAQYTPFSRLRGRVRLRWF
                     PQITMTILPPRRLVISADVRGRERRNKAGKLLADLMTEMMFATSNYRRTLFGALLDAR
                     RVHGGRHVIVEDVERVPLDYTALIVRALLVGKLIARDTRRGEAVGVLLPNAIGAVAVL
                     FGLQARGRVAAMLNYTLGAKNLVASCESALVRRIYTSERFVVAAKLEHTVAKLREVAT
                     VVYLEDLRERITPWLKLEAAVAGRFASLLYKRERVAPDEAAIVLFTSGSEGTPKGVVL
                     SHANVLANREQVAARIDFGAQDVILNALPMFHSFGLTGGTLLPLLSGMRTFFYPSPLH
                     YRIVPEVAYDVNATILFGTNTFLAGYARFAHPYDFYSVRYVFAGAEKLKDETRRTWTD
                     KFGVQVFEGYGTTETSPALATNTPIDSKPGTVGRFLPGIEHALDPVPGVEGGRLSVRG
                     PNIMLGYFRHERPGVIEPPATQRGPGWYDTGDIVAIDDEGFITIQGRAKRFAKIGGEM
                     VSLTAVEELATRAWPGAQHACISVPDFQKGEQLILVTTRAAAQRADLSAQARADGMSE
                     LNVPKRVVSVAAIPLLGSGKTDYPAVQALGETALPRGERGAS"
     gene            complement(2749..>3454)
                     /locus_tag="VIQ99_07205"
     CDS             complement(2749..>3454)
                     /locus_tag="VIQ99_07205"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9182970.1"
                     /translation="ELYVQPIVAMGGRNRTGPAAEVLLRMRDESGGAAILPVHFLASA
                     ERYQLMSHIDRWVVQTTLTAIAGGAPHLPAGRTCNINLSAQTLSDDDFLEFVVDVLDH
                     TGVAPERICFEVRESAVVTQLDQAQRFIAVLHGIGCRFALDNFGSGIGSFANLKNLSL
                     DFLKIDGTYTRNLETDSVNREMVAAMVKLARTLDFQVVAEQVEDQSAFETLRTLGVDF
                     VQGYAVEKPRPLQAVH"
BASE COUNT          635 a         1171 c         1112 g          536 t
ORIGIN      
        1 cggtgaacag cgcgtacgac gcggaatgat cggccacgcg cgagcccacc gcggaaccga
       61 gcacgatcgc aacgatcgtc gaaccctcga tccagccgtt ggcgcggacg agccgcgcgg
      121 tgccgacgag ctccggcagg attccgtatt tcgccggccc atacaccgcg gcgccggcac
      181 cgacgagcgc gtaggcggcc atcggctcga cgccgacgaa catgaggccc gcgccggctg
      241 ctttcaggac gttgccgagc atgagcacgt gcggcttcgg ccgccgatcg gcgaacgtcc
      301 cgacccacgg cgcgagcacg acgaacgcca ccagaaagga gctctgcagc gcgggcacgt
      361 accagtcccc gcgcggcgac tcgaacagca ttgcgatcgc cgtgaacagg atcgcgttgt
      421 cggcgaacgc cgtcaggaac tgtgctgcta gcaggatagg aatgccgcgg ctcacgaagc
      481 accccgctcg ccccgtggca aggcagtttc gccgagcgcc tgcacggccg gatagtccgt
      541 cttgccgctg cccaagagcg gaatcgcggc gacggacacg acacgcttcg gcacattgag
      601 ctcactcatg ccgtcggcgc gcgcctgggc cgaaagatcg gcgcgctgag ccgccgcgcg
      661 cgtcgtcacc agaatgagtt gctcaccctt ctggaagtcc ggcacgctga tgcacgcgtg
      721 ctgcgctccc ggccacgcgc gcgtcgcgag ctcctcgacg gccgtcagcg acaccatctc
      781 gccgccgatc ttcgcgaacc gcttggcgcg cccttggata gtgatgaagc cttcgtcgtc
      841 gatcgcgaca atatcgcccg tgtcgtacca gcccgggccg cgttgcgtcg ccggcggctc
      901 gatcacgccg ggccgctcat gccgaaagta tccgagcatg atgttcggcc cgcgcaccga
      961 gagacgtcca ccttcgacac ccggcacggg atcgagcgcg tgttcgatgc caggcaggaa
     1021 gcggccgacg gtccccggct tcgagtcgat aggtgtgttc gtcgcgagag cggggctcgt
     1081 ttccgtggtc ccataccctt cgaaaacctg cactccgaac ttgtccgtcc acgtgcgacg
     1141 tgtctcgtcc ttgagcttct cggcaccggc gaacacatag cgtacgctat agaagtcata
     1201 agggtgcgcg aaacgcgcat agccggccaa gaacgtgttc gtgccgaata ggatcgtcgc
     1261 gttcacgtcg tatgcgacct cggggacgat ccggtagtgc agcggcgacg gatagaagaa
     1321 tgtgcgcata cccgacaaca gcggcaacaa cgtgccgccg gtgagcccaa acgagtggaa
     1381 catcggcagc gcgttcaaga tcacgtcctg tgcgccgaag tcgatccgtg ccgccacttg
     1441 ctcacggttc gcgagcacgt tcgcgtgcga cagaaccacg cccttcggcg tgccttcgga
     1501 gccggacgta aacaacacga tcgcggcctc gtcgggcgcg acgcgttcac gcttgtacag
     1561 cagcgaggcg aaacgcccgg cgaccgcggc ctcgagcttg agccacggcg tgattcgttc
     1621 gcgtagatct tctaggtaga cgaccgtggc gacctcgcgc aacttcgcga cggtgtgctc
     1681 gagcttggcg gcgacgacga accgctccga cgtgtagatc cggcggacca acgcagactc
     1741 gcaggacgcg acgaggttct tcgcgccaag cgtgtagttc aacatcgccg cgacgcggcc
     1801 tcgcgcttgc aggccgaaca gcactgccac cgcaccgatc gcgttcggca acagcacgcc
     1861 gaccgcctcg ccgcggcgcg tgtcgcgcgc gatcagctta ccgacgagca gcgcccgcac
     1921 gatcagcgcc gtgtagtcga ggggcacgcg ctcgacgtcc tcgacgatca cgtggcggcc
     1981 gccgtgcacg cggcgcgcat cgagcaacgc cccgaacagc gtgcgccggt agttcgacgt
     2041 cgcgaacatc atctcggtca tgaggtctgc aagcagcttg ccggctttgt tccggcgctc
     2101 gcggccacgc acgtcagccg aaatcacgag tcggcgcggc ggcaggatcg tcatcgtgat
     2161 ctgcggaaac cacctgagac gcacgcggcc gcgcaaccgc gagaacggcg tgtactgcgc
     2221 gccctcgatt cgaaccggca gcagcatggc gcccgatttg tcggcgacga gccccggacc
     2281 cggataaatc ttcatcaacg agccggtgac ggtgatgcgt ccctccggga agatcgccgc
     2341 gcgcttgtcc tgctctatgt agcggatcaa cgacttcaag gagtacgggt tcgtcggatt
     2401 cagcggaaac gcatcgacga tcgcgagcag cggccgcatc caccagcgct tcgcgatctc
     2461 ggtgttgacc gcgaacgtca gccgatccgg caagaagacc gcgagcagcg cggcatccag
     2521 gaacgacgtg tgatttgcga tcaccagaac ccgcttgccc gccccagcgt agtgctcgag
     2581 accggtcacg cggacgcgat agacgagacg caacaccgtg cgcaacaacc atcgacccag
     2641 ggacatctac gcctcgcgct gccgccttga gacacaacga tgccgcgtcc gcagcgcaaa
     2701 ttccatcgcg gcgcaacgct tatgcggcgc gcgtctcgtt ctcagcggtc agtggacggc
     2761 ctggagcggc cgcggctttt ctacggcgta cccctggacg aagtcgacgc cgagggtgcg
     2821 caaggtttcg aacgcgcttt ggtcctcgac ctgctcggcg acgacttgga agtcgagcgt
     2881 gcgcgcgagc ttgaccatcg ccgcgaccat ttcgcgattc acgctgtcgg tctcgaggtt
     2941 gcgcgtatag gtgccgtcga tcttcaggaa gtcgagcgac aggttcttca agttcgcgaa
     3001 cgagccgatg ccgctgccga agttgtccag agcgaaacgg cagccgatgc cgtgcagcac
     3061 cgcgatgaac cgctgcgcct gatcgagctg agtgacgacg gccgactcgc gcacctcgaa
     3121 gcaaatgcgc tcgggtgcga cgccggtgtg gtcgagcacg tccacgacga actcgaggaa
     3181 gtcgtcgtcg ctcaacgtct gcgcggaaag attgatgttg caggtgcgac ccgccggcag
     3241 atgcggcgcg ccgccggcga tggccgtcaa cgtcgtctgc acgacccagc ggtcgatgtg
     3301 cgacatgagc tggtagcgct ccgccgaagc caggaaatgc acgggcagta tcgctgcgcc
     3361 cccggactcg tcgcgcatcc gcagcagcac ctcggcggcc ggcccggtgc gattgcggcc
     3421 gcccatcgcg acgatcggct ggacgtagag ctcg
//
LOCUS       DATCUD010000491         5438 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90207, whole genome shotgun sequence.
ACCESSION   DATCUD010000491 DATCUD010000000
VERSION     DATCUD010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5438)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5438)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5438
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90207"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..301)
                     /locus_tag="VIQ99_07210"
     CDS             complement(17..301)
                     /locus_tag="VIQ99_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015947499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182971.1"
                     /translation="MLIAAGPLAHAHNAICDCYDNGDDTITCEGGFSDGGKAVGVPLR
                     VLDGAGKVLVDGKMSDNSDFTFAKPKVDFRVEFDAGQGHVVTIDGRDIEE"
     gene            527..1021
                     /locus_tag="VIQ99_07215"
     CDS             527..1021
                     /locus_tag="VIQ99_07215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182972.1"
                     /translation="MRFVTSLSVGLLLAGPLSAQENTSIHIAPITFQNEELIERAIIT
                     DCDLPNVQLAELQRATSGTSVTLAPQLNDAGKILEIQIVNAVAGGNAFTGHQKGVTLV
                     GKLFENDREVASFSAMRSSGGGAFGGFKGSCAVLNRCAETLAKDVATWLRKPTPGARL
                     GELK"
     gene            complement(1025..2899)
                     /locus_tag="VIQ99_07220"
     CDS             complement(1025..2899)
                     /locus_tag="VIQ99_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003040325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 domain-containing protein"
                     /protein_id="HEY9182973.1"
                     /translation="MSPALRRPTRSRTFNASSLSRRDAIAALLAASALAACDRGRVAA
                     TFRDAEADALALLDGLAENLLRLSPESATSLGIDVDGRAVLRSQLTDRSAQGQQRIAD
                     QLREDLALADAVDVSALSAATRTSFAVVRSAYATALQGFALPYGDVAVGGWRNTPYVV
                     IQNVGAYLDIPRFIDTDHRIENAADAEAYLARLESYARQLDGELGRIEAARAAGLVPP
                     VFLIDKALTQLRLSIDGARVGGALVESIARRTQTIPGTWVERARAIAAQQIAPALERQ
                     AEELTAQRAVATDDAGMWARPSGDEYYRWALKASTTTTLSPDEIHEQGRSELEALHAR
                     MDAILKTVGYSQGTVGERMTALAEDPRYQFAEGDAGRAEILAFIDNRLEWIRAQMPRA
                     FNTVVNPNLEVKRLPPEEEPGAPAAYGGAGSIDGTIPGRFWINLRTTDLHSKYSVADL
                     AFHEAIPGHVWQGEYTRRQPLLRQLLAFNTYSEGWGLYAEQLADELGAYDDDPVGRLG
                     YLQSLAFRACRLVVDTGIHAKQWTRERAVQFFVEFNGSNPLEVASEVDRYCSWPGQAC
                     GYKVGHTEINRLRENAIAALGSSFDLKAFNDAVVLGGNVPLDVLAGNVDEYVRAASAG
                     "
     gene            complement(2896..4044)
                     /locus_tag="VIQ99_07225"
     CDS             complement(2896..4044)
                     /locus_tag="VIQ99_07225"
                     /inference="COORDINATES: protein motif:HMM:TIGR03187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DGQHR domain-containing protein"
                     /protein_id="HEY9182974.1"
                     /translation="MLALRMRQKDSEFYFVSYPAEDLLRRVRFETRFYGDRGEVVGGD
                     APDDDAASEQVDDVEQYVRQIERSSGAFQRELNRRKVRQIRDFFRNETDQPVVPGAVL
                     LFTSEELAFNPIGQYQQMGDLALPSKPFLIIDGQHRLAGLHFYLREPDADRRVEVPCV
                     IFDGKTAEFATEMFVIINSTHTRINKSHLVDLYEKIEWGTDPHKKLAARLVRALYDES
                     DSPLRYHVNMLGGRSQRDMWINQAQLFGEVHRFVTRKDSEAWTTDGRGLSRDRAYGFL
                     RDVLRAAKRVFGDAWGDNKRYMVTRDVTLKALIRLAGDVAAKSRALGLSPAASAGATE
                     ASLVKRFERWAPLVAEFRRDGFYERFPARGQVERVEKIRDRLRRDSGL"
     gene            complement(4067..5353)
                     /locus_tag="VIQ99_07230"
     CDS             complement(4067..5353)
                     /locus_tag="VIQ99_07230"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9182975.1"
                     /translation="MASLLRSIGILVATLATIGGWAPAQSQPARPAPPALGDGPWDLR
                     TETGMIHVSVLTKDLESPWSLAFLPDGGMLVTERPGRLRVIRDGKLDPKPIEGLPDLV
                     ATGISGLFGLALHPDFARNRLIYLAYPKPQPNDRDVMTLAVARARWDGGSSLAEVKDI
                     FVAKDWYGTAMSQQNNRCCGQGPASGSFGARIEFDEQNRLYITSGDRNWGEKSQDPES
                     HIGKILRLNDDGSVPSDNPFVGRSGYLPEIYTLGHRNQTGLRFDPATGDLWSTEFGPA
                     GGDELNFIEAGKNYGWLLITHGEHYNNEPKKLGSGGVEGYVDPVIWWPRGGNPGNLIV
                     YRGELFPAWQGNVLIATMSNRALKPGLVRAVIGDNGALVHEERMLTEIGTRMRDVVEA
                     PDGRVFVLTEASAFASPGAILVVEPGVEPTPPPRQQ"
BASE COUNT          907 a         1810 c         1769 g          952 t
ORIGIN      
        1 catccttcgg ccgctgttat tcctcgatgt cacggccgtc gatcgtgacg acgtggccct
       61 gtcccgcgtc gaactcgacg cggaaatcga ccttaggctt ggcgaacgtg aaatcgctgt
      121 tgtcgctcat cttgccgtcg accagcacct tgccggcgcc gtcgagcacg cgcaacggca
      181 cgccgacggc cttgccgccg tcgctgaaac cgccctcgca cgtgatcgtg tcgtcgccgt
      241 tgtcgtagca gtcgcagatc gcgttgtgcg cgtgcgcgag cggccccgcg gcgataagca
      301 ccgcggccgc gaggagtcgg aggctctgag atcgggaggg gctcgatgac acgaagcgaa
      361 ttgtcgtcgc aaacgaggcg tggagccagg ttcagaaccg ttaataacgg ttaagcgatg
      421 cctccgaaac ccaaccgtgg cgcgggccgg cggagggatg ccggcccgcg ttacgccgcc
      481 gtagtcgtgc taggctggct gaagccactc gtcaaaagga gtccacatgc gattcgtgac
      541 gtccttgagc gtaggcctac tgctcgccgg accgctgagt gcccaggaga acacgagcat
      601 tcacatcgcc ccgatcacgt tccagaacga agagctgatc gaacgcgcca tcatcaccga
      661 ctgcgatctg ccgaacgttc agctcgccga gctgcagcgt gcgacttccg ggacgtccgt
      721 cacgctggcc ccacaactaa atgacgccgg caagatcctc gagattcaga tcgtgaacgc
      781 cgttgccggc gggaacgcat tcacgggcca ccaaaaaggc gtcacgttgg tcggcaagct
      841 cttcgagaat gaccgtgagg tcgcgtcgtt ctcggcgatg cgcagttccg gcggaggtgc
      901 attcggaggc ttcaagggtt cgtgcgcggt cttgaatcgg tgcgcggaga cgctcgccaa
      961 ggacgtcgcg acgtggctcc gcaaaccgac gccgggcgcg cggctcgggg agctgaaata
     1021 gtctctaccc cgcgctcgcg gcgcgcacgt actcgtcgac attgccggcg agcacgtcga
     1081 gcggcacgtt gccgccgagc acgaccgcgt cgttgaacgc cttgagatcg aagctcgacc
     1141 cgagcgcagc tatcgcgttc tcgcggagtc ggttgatctc ggtgtgcccg actttgtagc
     1201 cgcacgcctg accgggccaa gagcagtagc gatcgacctc gctcgcgacc tcgagcggat
     1261 tcgagccgtt gaactccacg aagaactgca cggctcgctc gcgggtccac tgcttggcgt
     1321 gaattccggt gtcgacgacg agccggcacg cgcggaacgc gagcgactgt aggtaaccca
     1381 agcgtccgac cggatcgtcg tcgtacgcgc cgagctcgtc ggcgagctgc tcggcgtaga
     1441 ggccccatcc ttccgagtac gtgttgaacg cgagcaactg gcgcagcagc ggctggcggc
     1501 gcgtgtactc gccctgccag acatgacccg gaatcgcctc gtgaaacgcg agatccgcaa
     1561 cgctgtactt gctgtgcaga tccgtagtgc gcaggttgat ccagaaccgt cccgggatcg
     1621 tgccgtcgat cgatcccgca ccgccatagg cggccggcgc gccgggctct tcctcgggtg
     1681 gcaagcgctt cacctcgagg ttcggattca cgacggtatt gaacgcgcgc ggcatttgcg
     1741 cgcggatcca ctcgagtcgg ttgtcgatga acgcgaggat ctcggcgcgt ccggcgtcgc
     1801 cttcggcaaa ttggtagcgc ggatcctcgg cgagcgccgt cattcgctct ccgaccgtgc
     1861 cctgcgagta gccgacggtc ttgaggatcg catccattcg cgcgtgcagc gcttcgagct
     1921 cgctgcgccc ctgctcgtgg atctcgtccg gcgacagcgt cgtggtcgtc gacgccttca
     1981 gcgcccaccg gtagtactcg tcgcccgacg gccgcgccca catgcctgcg tcgtcggtcg
     2041 ccaccgcgcg ctgcgccgtg agctcctctg cctgtcgctc gagcgccggt gcgatctgct
     2101 gcgcggcgat cgcgcgtgcg cgttcgaccc acgtgcccgg tatggtctgc gtgcgccgcg
     2161 cgatggactc gacgagcgcg ccgcccacgc gtgcgccgtc gatcgagagc ctgagttgcg
     2221 tgagcgcctt gtcgatcagg aacacgggcg gcacgagccc tgccgcgcgc gcggcctcga
     2281 tcctaccgag ctcgccgtcg agctgcctcg cgtacgactc gaggcgcgcg aggtacgcct
     2341 cggcgtctgc cgcgttctcg atgcgatggt cggtgtcgat gaatcgcggg atgtcgagat
     2401 acgccccgac gttctgaatc acgacatacg gcgtgttgcg ccaaccgccg acggcgacgt
     2461 cgccgtacgg aagcgcgaag ccttgtagcg ccgtggcgta agcgctgcgc acgaccgcga
     2521 agctcgtgcg cgtcgcagca ctgagcgcgg acacgtcgac ggcgtcggcc agcgcgaggt
     2581 cttcacgcag ctggtcggcg atccgttgct gcccctgcgc agagcgatcg gtgagctgcg
     2641 agcgaagcac ggctcttccg tcgacgtcga tcccgagcga cgtcgcactc tccggagaca
     2701 aacgcaagag gttctcggca agcccgtcca gcagggcgag cgcgtccgct tccgcgtctc
     2761 ggaacgtcgc cgccacccgg ccgcgatcgc acgcggccaa tgcgctggcc gccagcaacg
     2821 cagcgatggc gtcgcgacgg ctcagcgacg aagcattgaa cgtacgcgat cgtgtggggc
     2881 gccgcagcgc tggactcata gaccgctgtc gcgccgtaga cggtcgcgaa tcttctcgac
     2941 gcgctcgacc tgaccccgcg ccggaaagcg ttcgtagaag ccgtcacgcc ggaactcggc
     3001 gacgagcggc gcccagcgct cgaatcgctt gacgagcgac gcctccgtag cgccggcgct
     3061 cgcggcgggc gacaagccga gcgcgcgaga tttcgccgcc acgtcgccgg cgaggcggat
     3121 caaggccttc agcgtcacgt cgcgggtgac catgtagcgc ttgttgtcgc cccaggcgtc
     3181 gccgaacact cgtttcgccg cgcgcagcac gtcgcggaga aatccgtagg cgcgatcgcg
     3241 cgacaggccg cgcccatcgg tcgtccacgc ttccgaatcc ttacgagtga cgaatcgatg
     3301 cacctcgccg aaaagctgcg cctggttgat ccacatgtcg cgctgggagc gcccaccgag
     3361 catgttcacg tgataacgca gcggcgaatc gctctcatcg tacagcgcgc gcacgaggcg
     3421 cgccgcgagc ttcttgtggg ggtccgtgcc ccattcgatc ttctcgtaga gatccacgag
     3481 atggctcttg ttgattcgag tgtgcgtgga attgatgatc acgaacatct cggtcgcgaa
     3541 ctccgccgtc ttgccgtcga aaatcacgca cggaacttca acgcgccgat cggcgtcggg
     3601 ctcgcgcaag tagaagtgca gcccggcaag gcgatgctgg ccgtcgatga tcaaaaacgg
     3661 cttactcggc agcgcaaggt cgcccatctg ctgatactgg ccgatcgggt tgaacgcgag
     3721 ctcttcggac gtgaagagca gcaccgcccc ggggactacg ggctgatccg tctcgttgcg
     3781 gaagaagtcg cggatctggc gcactttgcg ccggttgagc tcgcgctgaa aggcgccgga
     3841 gctgcgctcg atctggcgca cgtactgctc gacgtcgtcg acttgctcgc tggcagcatc
     3901 gtcgtccggc gcgtcgccgc cgaccacctc cccgcggtcg ccgtaaaagc gtgtctcgaa
     3961 tctgacgcgg cgaagcaagt cctccgccgg ataactcacg aaatagaact cggagtcctt
     4021 ctgtcgcatt cgcaaggcca gcatcgaggc tctccttcag acgcggctat tgttgtctcg
     4081 gcggcggagt gggctcgaca cccggctcga ccaccagaat cgcgcccggc gacgcgaacg
     4141 ccgaagcttc ggtcaggacg aagactcgac cgtcgggcgc ctcgacgacg tcgcgcatcc
     4201 gcgtaccgat ctcggtcaac atgcgctcct cgtgaactag cgcgccgttg tcgccgatga
     4261 ccgcgcgcac gagaccgggc ttgagcgccc gattcgacat cgtggcgatc agcacgttgc
     4321 cctgccacgc agggaagagc tcaccgcggt agacgattag gttgccgggg ttgccgccgc
     4381 gcggccacca gatcacggga tcgacatagc cttcgacgcc gcccgagccg agttttttcg
     4441 gctcgttgtt gtagtgctcg ccgtgcgtga tcaagagcca gccgtagttc ttgcccgcct
     4501 cgatgaaatt gagctcgtca ccgccggccg gcccgaattc cgtcgaccaa aggtcgcccg
     4561 tcgcgggatc gaatctcaag cccgtctggt tgcgatgccc gagcgtgtag atctccggta
     4621 ggtatccgct cctgccgacg aacggattgt cgctggggac ggagccatca tcgttcaacc
     4681 gcaggatctt gccgatgtgc gattcgggat cctgggattt ctcgccccag ttgcggtcgc
     4741 cggacgtgat atacagccgg ttctgctcgt cgaattcgat gcgtgcgccg aagctgcccg
     4801 atgccgggcc ctgcccgcag cagcgattgt tttgttggct catcgccgtg ccgtaccagt
     4861 ccttggccac gaagatgtcc ttgacctcgg ccagcgacga tccgccatcc cagcgcgcgc
     4921 gcgcgacagc cagcgtcatc acgtcgcggt cgttcggttg cggcttggga taggcaaggt
     4981 agatcaggcg gttgcgcgcg aagtcgggat gcagcgcgag accgaagagc ccgctgatgc
     5041 cggtggcgac gagatccggc agcccctcga tcggcttggg atcgagcttg ccgtcgcgaa
     5101 tcacacgcag ccgtcccggc ctttcggtca cgagcatgcc gccgtcgggc agaaaggcga
     5161 ggctccacgg cgactcgaga tccttcgtaa gcaccgacac atggatcatg ccggtctccg
     5221 tccgcagatc ccaggggccg tccccgagcg ccggcggtgc cggtcgtgcc ggttgagact
     5281 gcgcgggcgc ccacccgccg atggtcgcga gcgttgcgac gaggatcccg atcgagcgga
     5341 gtaacgatgc cactgcgtgc ttctccttat cgttttgcgc ggttgccggc gccaacgatt
     5401 ccgtatgtta gcggcccgca acgaaagcgt cgctgtag
//
LOCUS       DATCUD010000492         1535 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33353, whole genome shotgun sequence.
ACCESSION   DATCUD010000492 DATCUD010000000
VERSION     DATCUD010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33353"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..195
                     /locus_tag="VIQ99_07235"
     CDS             <1..195
                     /locus_tag="VIQ99_07235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182976.1"
                     /translation="RARVATFLTPLSVIDEASCPQMSGSLRRAFASARELLADLVPDE
                     LWAHRTMMFDRHLTWPIRLN"
     gene            complement(308..>1535)
                     /locus_tag="VIQ99_07240"
     CDS             complement(308..>1535)
                     /locus_tag="VIQ99_07240"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9182977.1"
                     /translation="KSQRGEARMRVGHSVRWAAALWVVLGGAGHAQPTPIGVAVPPLG
                     DGPWVFDTAEQHKVRVSVVTKGLSHPWAIAFLPDGGMLITERGGRLRVVRDGALDPRP
                     ISGLPAIRTDGNGGLMDVALHPEFERNALVYLTYTKPVGNGMGAPALARGRLEDHALV
                     DVEDLLVPDFYEGNSGLNGRVVFGRDGKVYMSTGGRSQNDVANVAQDRMSLRGKVLRL
                     NDDGSVPADNPFVGRAGHRPEIFSLGHRNQLGLIVHPTTGEIWQHENGPQGGDELNII
                     LPGRDYGWPEVSFGRDYSGRRVSEHPTREGIEQPLVIWVPAIAAAGMAVYTGDRFPAW
                     KGNVFVGAMTEGRIPGTGHLQRVVFNENMEEIRRESMLRELRQRIREVREGPDGFLYL
                     LTDEEDGALLRLEPAP"
BASE COUNT          245 a          508 c          515 g          267 t
ORIGIN      
        1 cgtgcccgtg tcgcgacgtt cctcacaccg ctctcggtga tcgacgaagc ctcatgtccg
       61 cagatgagcg gctcgctccg tcgcgcgttc gcgagcgcac gcgagctgct cgcggacctc
      121 gtgcccgacg agctgtgggc acatcgcacg atgatgttcg accgacacct cacatggccg
      181 attcgtctca attagcaagc gatctgccca aaccggagtt cggtgaatga cttgaatgcg
      241 acctgaagcg ctcggccata gccgggcacg ctttcaggta cgccgcgccg gttgtcgctc
      301 ggacaactta cggcgccggc tcgaggcgca gcagcgcgcc gtcctcttcg tccgtgagca
      361 agtagaggaa accatcgggc ccttcgcgca cctcgcggat gcgctgcctg agctcgcgga
      421 gcatcgactc gcgccgaatc tcctccatgt tctcgttgaa caccacgcgc tggaggtggc
      481 ccgtgcccgg gatgcggccc tcggtcatcg cgccgacgaa gacgttgcct ttccaggccg
      541 gaaaccggtc gcccgtgtag acggccattc cggccgccgc gatggcgggc acccagatga
      601 cgagcggttg ctcgatcccc tctcgggtcg gatgctcgga cacgcgtcga cccgaatagt
      661 cgcggccgaa gctcacctcg ggccagccgt aatcgcgccc cggcaagatg atgttgagct
      721 cgtcgccgcc ttgggggccg ttttcgtgtt gccagatctc accggtcgtg gggtggacga
      781 tcaggccgag ctggttgcga tggcccaggc tgaaaatttc cggccgatgg cccgcgcggc
      841 cgacgaacgg gttgtcggcc ggcacggagc cgtcgtcgtt gaggcgcagg accttgcccc
      901 gcaggctcat gcggtcttgc gcgacgttgg caacgtcgtt ttgggatctg ccgccggtgg
      961 acatgtagac cttgccatca cgtccgaaga ccacgcggcc gttgagaccc gagttgcctt
     1021 cgtagaaatc ggggacgagc aggtcttcga cgtcgacgag cgcgtggtct tcgagccggc
     1081 cgcgagcgag cgcgggagcg cccatcccgt ttccgaccgg cttggtgtag gtgagataga
     1141 cgagggcgtt acgctcgaac tcgggatgga gcgcgacatc catgaggccg ccgttgccgt
     1201 cggtccgaat cgcgggcaag ccggagatgg gccgggggtc cagtgcgccg tcgcgaacga
     1261 cgcgcaggcg accgccgcgc tcggtgatca gcatgccgcc gtcgggaagg aatgcgatgg
     1321 cccagggatg cgagaggcct ttggtgacaa cgctgacccg gactttgtgc tgctcggccg
     1381 tatcgaagac ccagggtccg tcgcccaatg gcggtaccgc cacgccgatg ggcgtcggct
     1441 gggcgtggcc ggctccgccc aggacgaccc acaacgctgc agcccaccgg acggaatgtc
     1501 caactctcat gcgcgcttcc ccccgttgcg atttc
//
LOCUS       DATCUD010000493         2115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40421, whole genome shotgun sequence.
ACCESSION   DATCUD010000493 DATCUD010000000
VERSION     DATCUD010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40421"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1776
                     /locus_tag="VIQ99_07245"
     CDS             <1..1776
                     /locus_tag="VIQ99_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018079260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosidase"
                     /protein_id="HEY9182978.1"
                     /translation="SRSVHVRLSRELLARPFADFESVLTTRRAETDEFYAELQRDVDG
                     DDAKLVQRQAFAGMIWSKQFFYYDVPAWLAGDPAHPPPPANRKYGRNREWTHLNNADV
                     ISMPDKWEYPWYAAWDLAFHCIPLALLDAEFAKNQLVLLTREWYMHPNGQMPAYEWAF
                     GDVNPPVHAWATWRVFQIDRKRRGDAGDLEFLERVFHKLVLNFTWWVNRKDAEGRNVF
                     QGGFLGLDNIGVFDRSATLPTGGHIDQSDGTSWMAMYSLNLMRIALELAKHNHVYEDI
                     ATKFFEHFLGIAEAMSNIGEHGIGLWDDEDKFFYDVLHLPDERMQQLKVRSMVGLIPL
                     FAVEVLEPDLLKELPEFARRLEWYLNYRPDLAKLVSHWEVEGVGHRRLLSLLRGHRMK
                     KLLKRMLDETEFLSEYGVRALSRYHESQPYVFDLMSGERVSVAYKPAESDTGLFGGNS
                     NWRGPIWFPVNYLIIESLQKFHHYYGDDFRIECPTGSGTFLSIREVADELSRRLARIF
                     LKNADGERPVFNRHPLLCRDPHFRDYVLFYEYFHGDTGRGVGASHQTGWTGLIAKLLM
                     PSRAAAATGAEPAISAAVAAVAQQG"
     gene            complement(1808..>2115)
                     /locus_tag="VIQ99_07250"
     CDS             complement(1808..>2115)
                     /locus_tag="VIQ99_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000509953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY9182979.1"
                     /translation="ELVWSYAAPRFFSTNISGAQRLPNGNTLITEGAGGRMFEVTSDG
                     TIVWEYMNPLFAGPRQSNDVYRAYRLPYGWIPQLEPPTEKAVTPPALGSFAVPEPAP"
BASE COUNT          368 a          693 c          676 g          378 t
ORIGIN      
        1 tcgcgctcgg tgcacgtgcg gctgtctcga gagttgctcg cgcgaccgtt cgccgatttc
       61 gaatccgtcc tcacgacccg gcgcgcagag accgacgagt tctacgccga gctgcagcgc
      121 gacgtcgacg gtgacgacgc gaagctcgtg cagcgccaag cgttcgcagg aatgatctgg
      181 agcaaacagt tcttctacta tgacgtcccg gcctggctgg ccggcgatcc ggcccacccg
      241 cccccgcccg cgaatcgcaa gtacggccgc aatcgcgagt ggacccacct gaacaacgcc
      301 gacgtcatct cgatgccgga caaatgggag tacccgtggt acgccgcatg ggatctcgcg
      361 ttccattgca tcccgctcgc actgctcgac gccgagttcg cgaagaacca gctcgtgctg
      421 ctgacccgcg agtggtacat gcatccgaac ggccagatgc ccgcgtacga atgggcgttc
      481 ggcgacgtga atccgcccgt gcacgcgtgg gccacgtggc gcgtgttcca gatcgaccgc
      541 aagcgccgcg gcgatgccgg cgacctcgag ttcctcgagc gcgtgttcca caagctcgtg
      601 ctgaatttca cctggtgggt caaccgcaag gacgccgaag ggcgcaacgt gttccaaggc
      661 ggcttcttgg gcctcgacaa catcggcgtg ttcgatcgca gcgccacttt gccgaccggc
      721 ggccacatcg atcagtcgga cggcaccagc tggatggcga tgtactcgct gaacctcatg
      781 cgcatagcgc tggagctcgc gaagcacaat cacgtctacg aggacatcgc cacgaagttc
      841 ttcgagcact tcctcggcat cgccgaggcc atgagcaaca tcggcgagca cggcatcggt
      901 ctctgggacg acgaggacaa gttcttctac gacgtcttgc acttgccgga cgagcgtatg
      961 cagcagctca aagtgcgctc gatggtcggg ctgattccgc tgttcgcagt cgaggtgctc
     1021 gagccggacc tgctgaaaga gctgccggaa ttcgcgcgcc ggctcgagtg gtacttgaat
     1081 taccgtcccg atctcgcaaa gctcgtctca cactgggaag tcgagggcgt cggtcaccgc
     1141 cggctgctgt cactgctgcg cggccaccgc atgaagaagc tcctgaagcg catgctcgac
     1201 gagacggagt tcttgtccga gtacggcgtg cgggcgctat cgcgctatca cgaatctcag
     1261 ccctacgtgt tcgacctgat gagcggcgag cgggtgtcgg tagcctataa gccggccgag
     1321 tccgatacgg gcttgttcgg gggcaactcg aactggcgcg ggccgatctg gtttcccgtg
     1381 aactacctca tcatcgaatc gctgcagaag ttccaccatt actatggcga tgattttcgg
     1441 atcgagtgcc cgaccggctc gggaacgttc ttgtcgattc gcgaagtcgc cgacgagctg
     1501 tcgcggcggc tcgcacggat cttcttgaag aacgccgacg gtgagcggcc ggtgttcaac
     1561 cgacacccgc tgctctgccg cgacccgcac ttccgcgact acgtgctgtt ctacgagtac
     1621 ttccacggcg acaccggccg cggcgtcggg gcgtcgcatc aaacgggctg gaccgggctg
     1681 atcgcgaagc tgctgatgcc ttcgcgcgcg gccgctgcga ccggcgccga gccggccatc
     1741 tcggcggcgg tcgccgccgt ggcacagcaa ggctaggaag gcctgcgacg gactcgcgaa
     1801 tccgcgtcta gggtgcgggc tcagggaccg cgaacgagcc gagcgctggc ggcgtcacgg
     1861 ccttctcggt cggcggctcg agctgcggga tccagccgta cggcaaccgg tacgcgcggt
     1921 agacgtcgtt cgattgcctt gggcccgcga acagcgggtt catgtactcc cagacgatcg
     1981 tgccgtcgct cgtgacctcg aacattcggc cgcccgcgcc ctccgtgatc agcgtgttac
     2041 cgttcggcaa ccgctgcgcg ccgctgatgt tcgtgctgaa gaagcgcggc gccgcgtacg
     2101 accacacgag ctcga
//
LOCUS       DATCUD010000494         1528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40426, whole genome shotgun sequence.
ACCESSION   DATCUD010000494 DATCUD010000000
VERSION     DATCUD010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40426"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            69..653
                     /locus_tag="VIQ99_07255"
     CDS             69..653
                     /locus_tag="VIQ99_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020028928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HEY9182980.1"
                     /translation="MNPLNSIQGTIAAGVVIAVVIALVTLGVSANEQSMIMWLHVGAG
                     VTWVGLLYYFNFVQVPALAAAAKDQGGPGGAGISKYVAPRALLWFRWAAVVTWLTGAI
                     YLYRVGLFDDAFLLRPAGFTIGVGAWLGTIMLFNVWVFIWPNQKKVLGLVEATAEQIA
                     KARRVAFLASRTNTMLSIPMLMSMVGFGHGGFIL"
     gene            703..>1528
                     /gene="nadC"
                     /locus_tag="VIQ99_07260"
     CDS             703..>1528
                     /gene="nadC"
                     /locus_tag="VIQ99_07260"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003152758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEY9182981.1"
                     /translation="MPHTSLPTDIAAVVSRAIAEDLGAEDLTAALIGAHSQAIARVLA
                     REAATLCGRAWFDETFRQLDPRVAVAWLADDGALVAADDVVCEVTGPARSVVTGERTA
                     LNFLQTLSGTATAARALVDLVAGTGARILDTRKTVPGLRLAQKYAVRCGGAENHRLGL
                     YDAILIKENHIAAVGSLTEAVRSARHRSPHVMIEVEVETLDELREALATDADRIMLDD
                     FSLDAMREAVALRNSHSGKRQELEASGSVNADSLRAVAATGVDFISIGSLTKHVRAI"
BASE COUNT          250 a          503 c          501 g          274 t
ORIGIN      
        1 tattctgcct gcacctgcga ccgagataaa caacgagaat cgcctaaagt cttccaaggg
       61 gaggtccaat gaacccgttg aattccatcc aaggcaccat cgcggccgga gtcgtcatcg
      121 ctgtcgtgat cgcgcttgtc acgctgggcg tcagcgccaa tgagcaaagc atgatcatgt
      181 ggctacacgt gggcgccggc gtcacgtggg tcggcctcct ctactacttc aatttcgtgc
      241 aagtccccgc cctcgcagcc gccgccaagg atcagggcgg gcccggcggc gccggcatca
      301 gcaaatatgt cgctccgcgc gcgttgctct ggtttcgctg ggcggcggtc gtgacttggc
      361 tcacgggcgc gatctacctc tatcgcgtcg ggttgttcga cgacgcattc ttgctgcgac
      421 ccgccggatt cacgatcggc gtcggcgcgt ggctcggcac gatcatgctg ttcaacgtct
      481 gggtattcat ctggccgaac cagaagaagg tcctggggct cgtcgaggcg acggccgagc
      541 agatcgcgaa ggcacgccgc gttgcgttcc tggcgtcgcg cacgaacacg atgctgtcga
      601 tcccgatgct gatgagcatg gtcggcttcg gtcacggcgg cttcatcctc taacggttgc
      661 tcgctcgcac gtcggtccgg caaggcaagc gctcttagac gcatgcctca cacgtcgttg
      721 cccacggaca tcgccgcggt cgtgagtcgc gcgatcgccg aggacctcgg cgccgaggat
      781 ctcactgcgg cgctgatagg tgcgcatagc caagcgatcg cacgagtcct ggcccgggag
      841 gcggcgacgc tgtgcggtcg cgcttggttc gacgagacgt tccggcaact cgatccgcgc
      901 gttgccgtcg cttggctcgc agacgacggc gccctcgtcg cggccgacga cgtcgtttgc
      961 gaggtcacgg gccccgcacg cagcgtcgtg accggcgagc gcacggcgct gaatttcctc
     1021 caaacgctgt ctggcacggc cacggccgcg cgagcgctgg tcgatctcgt cgccggcacc
     1081 ggcgcacgca ttctcgacac tcgcaagacg gtgccggggc ttcggctcgc acagaaatac
     1141 gcggtacgct gcggcggcgc cgagaatcat cgcttgggtc tatacgatgc gatcctgatc
     1201 aaggagaacc acatcgcggc cgtgggtagc ctcaccgagg ccgtgcggag cgcgcgtcac
     1261 cggtcgccgc acgtgatgat cgaggtcgag gtcgagaccc tcgacgagct gcgcgaggcg
     1321 ctggcgacgg acgccgatcg gatcatgctc gacgacttct cgctcgatgc gatgcgggaa
     1381 gcggtcgcgc tccgcaactc tcactcgggc aaacgtcagg agctcgaggc ttccggcagc
     1441 gtgaacgccg attcgctgcg cgccgtggcc gcgaccggcg tcgacttcat ctcgatcggc
     1501 tcgctcacga agcacgtgcg agcgatcg
//
LOCUS       DATCUD010000495         1808 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69025, whole genome shotgun sequence.
ACCESSION   DATCUD010000495 DATCUD010000000
VERSION     DATCUD010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69025"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="VIQ99_07265"
     CDS             <1..276
                     /locus_tag="VIQ99_07265"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018015257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY9182982.1"
                     /translation="EGAEVVAVASGVVIWSGERYGYGQLVEINHGNGYVTRYAHNVDN
                     LVAVGDTVRRGQVIARVGDTGRATGPNLHFEVLLNDKPVDPLTYIGK"
     gene            395..>1808
                     /locus_tag="VIQ99_07270"
     CDS             395..>1808
                     /locus_tag="VIQ99_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015282446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY9182983.1"
                     /translation="MVGVFGSRNQRLLKRYGSLVAAAGALEEGLRALGDDALRAKTEE
                     LKKRYTETEDLDALLPEAFALVREAARRTLGMRHFDVQLIGGIALHQGKIAEMRTGEG
                     KTLVATLNAYLNALSGKGVHVVTVNEYLAQRDADWMGPVYRFLGLTVGVIKSNQPTEE
                     KRAAYAADITYGTNNEFGFDYLRDNLAFRPEDRVQRTLNYAIVDEVDSILIDEARTPL
                     IISGRSEESTELYVRINQLIPSLKVHKPPAGKANEEIESTQVELIGVTGNSLGVMSTS
                     AALAKAKEGGHHLIEFEPEAKPPKAQLFVPGHYSIDEKSKQAHLTEEGHEYVERLLLK
                     AGLLNEGESLYDPANIRLMHHLTAALRAHGLFKREVDYIVKDGEVIIVDEFTGRTMIG
                     RRWSDGLHQAVEAKEGVRVKEENQTVASITFQNYFRMYKKLAGMTGTADTEAYEFQQI
                     YALEVVVIPTHKPMIRDDAPD"
BASE COUNT          364 a          595 c          585 g          264 t
ORIGIN      
        1 gaaggcgccg aggtcgtcgc ggtcgcgtcg ggtgtcgtga tctggtcggg ggagcgctac
       61 ggctacggcc agctcgtcga gatcaaccat gggaacggct acgtgacgcg ctacgcgcac
      121 aacgtcgaca atctcgtggc cgtcggcgac acggtgcgcc gcggccaggt catcgcccgc
      181 gtgggcgaca cgggccgggc cacggggccg aacctccact tcgaggttct gctgaacgac
      241 aagcccgtcg acccgctgac ttacatcggc aaataaagcc gccattaacc cgccgtaatc
      301 ttgcggccgg tgcccaaaac cggtccgggt ccttagaata ggcggcttta ccgcccccct
      361 aggactcccc gtgctcagca ccgtctccaa tttcatggtc ggcgtgttcg gcagccgcaa
      421 ccagcgcttg ctcaagcgct acggatcgct cgtcgcggcc gccggggcgc tcgaggaggg
      481 ccttagggcg ctcggcgacg acgcactgcg agcgaagacc gaggagctca agaaacggta
      541 tacggagacg gaggacctcg acgccctcct gccggaggct tttgcgctcg tgcgcgaggc
      601 cgcgcggcgc accctcggga tgcggcactt cgacgtgcag ctgatcggcg gcatcgcgct
      661 gcatcaaggc aagatcgccg agatgcgcac gggcgaaggc aagacgctgg tcgcgacgct
      721 gaacgcctac ttgaacgcgc tctcggggaa gggcgtgcac gtcgtcacgg tcaacgagta
      781 cctcgcgcag cgcgacgcgg actggatggg ccccgtctat cggttcctcg ggctcacggt
      841 gggcgtcatc aagagcaacc agccgaccga ggagaaaagg gcggcctacg cggccgacat
      901 cacgtacggc acgaacaacg agttcgggtt cgactatctg cgcgacaacc tcgcgtttcg
      961 ccccgaagac cgcgtccaac gcaccctgaa ctacgcgatc gtcgacgagg tcgactcgat
     1021 tctcatcgac gaggctcgca cgccgctgat catctcgggg cgctccgagg agtccaccga
     1081 gctctacgtt cgcatcaacc agctgatccc ctcgctgaag gtccacaagc cgccggccgg
     1141 caaagccaac gaggagatcg agtcgacgca ggtcgagctg atcggcgtga ccggcaactc
     1201 gctcggagtc atgtcgacga gcgccgcgct cgcgaaggcg aaagagggcg gccatcattt
     1261 gatcgaattc gagcccgaag cgaagccgcc caaggcgcag ctgttcgtcc caggccacta
     1321 ctcgatcgac gagaagtcga agcaggcaca cctgaccgag gaagggcacg agtacgtcga
     1381 gcgcctgcta ctgaaggcgg gcttgctgaa cgaaggcgag agcctctacg accccgcgaa
     1441 catcaggctc atgcaccacc tgacggccgc gctgcgcgcg cacggcctgt tcaagcggga
     1501 agtcgactac atcgtcaagg acggcgaggt catcatcgtc gacgagttca cggggcgcac
     1561 gatgatcggc cggcgctggt ccgacggtct gcaccaggcc gtcgaggcga aagaaggcgt
     1621 gcgcgtcaag gaagagaacc agaccgtcgc ctcgatcacg ttccagaact acttccgcat
     1681 gtacaagaag ctcgccggca tgacgggcac cgccgacacg gaagcgtacg agttccagca
     1741 gatctacgcg ctcgaggtcg tggtgattcc gacgcacaag cccatgatcc gcgacgacgc
     1801 gccggacc
//
LOCUS       DATCUD010000496         1732 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54722, whole genome shotgun sequence.
ACCESSION   DATCUD010000496 DATCUD010000000
VERSION     DATCUD010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54722"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..987)
                     /locus_tag="VIQ99_07275"
     CDS             complement(<1..987)
                     /locus_tag="VIQ99_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182984.1"
                     /translation="MHFALIRLTAAAITLACAVALPAAAAEDADAAVREQFRAAYTAA
                     STGLAADDDETLRAYVLYPYVRAARIAHALERAQQAWTETDVATADFLAESGDAPVAR
                     ALHRAWLASLARRGSWEAFSRHYDGAVATPALECQLFNARIARAETANLAPAIRARWL
                     TGHRLPTECEPAFQWLRQAGELPDDLIAERATLLLDNGQASFARVIAARLPQDTAAPL
                     LERADFVESPARMLDALLRQPASTTPSSVVLEAWSRLARNSPQAALARFDALEQRLPA
                     PDKHELALKLAMGLAWDRSAEALDYFARVPAAAFDESSLEWRARAGMWAGDWD"
     gene            1273..>1732
                     /locus_tag="VIQ99_07280"
     CDS             1273..>1732
                     /locus_tag="VIQ99_07280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014074986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9182985.1"
                     /translation="MKRLRLPASAKLSLAPLSSALLSLSLPAVVDAQDQGLEEITVTG
                     SRIVRRDFEANSPILTVEEEAFDNTMSVGIETVMNQLPQFVPAVTPFTTTDVQASATN
                     TPGASTLSLRGLGANRNLVLIDGRRGMPVNALGAISINSIPSAAVARVETI"
BASE COUNT          276 a          581 c          596 g          279 t
ORIGIN      
        1 atcccaatcg ccggcccaca tccccgcgcg cgctcgccac tcgagcgagg actcgtcgaa
       61 cgcggcggcc gggacgcgtg cgaagtaatc gagcgcctcc gcgctccggt cccaggcgag
      121 ccccatcgcg agcttcagcg cgagctcgtg cttgtcgggc gccggcaaac gttgctcgag
      181 cgcgtcgaag cgggcgaggg cggcctgcgg cgagttccgc gcgagtcgcg accacgcctc
      241 gagcacgacc gacgacggcg ttgtggacgc cggctggcgc agcagcgcat cgagcatccg
      301 cgccgggctc tcgacgaagt cggcgcgctc gagcagcggt gccgcggtgt cctgcgggag
      361 tcgcgccgcg atcacgcgcg cgaacgaggc ctgcccgttg tcgagcagca gagtcgcgcg
      421 ttcggcgatg aggtcgtcgg gaagctcgcc cgcttggcgc agccactgaa aggcgggctc
      481 gcattcggtg ggcaatcgat gtccggtgag ccaacgcgcg cggatcgcgg gggcgaggtt
      541 tgcggtctcg gcgcgcgcaa ttcgcgcgtt gaagagctgg cactcgagcg cgggtgtggc
      601 gacggcgccg tcgtagtggc gcgagaacgc ctcccacgat ccacggcgcg cgaggctcgc
      661 aagccacgca cggtgcagcg cccgcgcgac cggcgcgtcg ccgctctccg cgagaaagtc
      721 cgcggtcgca acgtccgttt cggtccacgc ctgttgcgcg cgctcgagcg catgtgcgat
      781 tcgtgcggct cgcacgtacg gatagagcac gtaggcgcgc agagtctcgt cgtcgtcggc
      841 cgcgaggccg gtggacgcgg ccgtgtacgc ggcgcgaaat tgctcgcgaa ccgccgcgtc
      901 ggcgtcctct gcggctgctg cgggcagcgc gaccgcacac gcgagcgtga tggcggcggc
      961 ggtgagtcga atcagcgcga aatgcatctc aatcgatgtc ctgagccatc cctgggtgac
     1021 ctcttgctcc aattctagaa tcgttgccgc ccgccgatcg gcagtaccgc tccgtgcggt
     1081 acggcccggt gctcgtgcaa cgaatgctcg ttgcgcaata gccacgtgcg aagtgtgttt
     1141 ggaaatccgc acgagtgcta gtatcgggcc gtatcagcgc gaaacgattg cggcgtcggc
     1201 acgccgtcgc caagaaacaa ctagcgtccg cgcactcgaa acttcggttc cgtcatctca
     1261 agggggattc tcatgaaacg cttgcgttta cccgcatcgg ccaagctgtc gcttgcgccg
     1321 ctttcctcgg cattgctcag cctctccttg cccgcggtcg tcgacgccca ggaccagggg
     1381 ctcgaggaga tcaccgtcac gggatctcgc atcgttcggc gcgacttcga ggcgaacagc
     1441 ccgatcctca cggtcgagga agaggcgttc gacaacacga tgtcggtcgg catcgagacg
     1501 gtcatgaacc agttgccgca attcgtgccg gccgtcacgc cgttcacgac gacggacgtc
     1561 caggcgagcg cgacgaatac tccgggtgcg tcgacgttga gcctgcgcgg cctcggagcg
     1621 aaccgtaacc tcgtgctgat cgacggtcgc cgcggcatgc ccgtgaacgc gctcggtgcg
     1681 atcagcatca actcgattcc gtcggccgcc gttgcgcgag tcgagacgat ca
//
LOCUS       DATCUD010000497         2736 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_104197, whole genome shotgun sequence.
ACCESSION   DATCUD010000497 DATCUD010000000
VERSION     DATCUD010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104197"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..416)
                     /locus_tag="VIQ99_07285"
     CDS             complement(<1..416)
                     /locus_tag="VIQ99_07285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182986.1"
                     /translation="MNARLAPALSGFSARLFVVFLALAVWAFWPSYFSRLFEQPNVWF
                     HAHGIALTLWLVMLVAQAQLIRTHRRIWHRRIGTLSYVVAPAVVVLSTIFVHQRISAR
                     IADPTQLPPAALGSLALMLGSLVAFAVCFGCAIWFKR"
     gene            606..1316
                     /locus_tag="VIQ99_07290"
     CDS             606..1316
                     /locus_tag="VIQ99_07290"
                     /inference="COORDINATES: protein motif:HMM:NF016087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HEY9182987.1"
                     /translation="MQRRLLCLLLPLTAMLGGCGGASDDAGPKPTPMPPTLAGTYAGQ
                     FPCSNCAAIAATLWLRPDGRFFLRQQFTDGEAADEVAASGPSATYSLGRWTWDEIAAE
                     AVLRSAGPERRLIVVDADRLQLHVASPTEHALTRDTTVPPFGDRLALDGESTVTERGA
                     TFRECLTGLELVVSESGLYRELRRQHRRMNPKGRVALTTIEGHLVTVTRGSTTSEQLV
                     VDRFVTMKPGTPCPAGRG"
     gene            complement(1318..2382)
                     /locus_tag="VIQ99_07295"
     CDS             complement(1318..2382)
                     /locus_tag="VIQ99_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182988.1"
                     /translation="MSSKRSSFAVLSGAVGFVAAAGAQAPAPAPPAPPEDTVFFLSNA
                     MPIQAFGGRIDILRGEGDIPGVVVLDKPYSARSITQSTQTLADGNRITQRNEARIYRD
                     SQGRTRREQTIGGVGPWQTAGEPVTMITINDPVADKSYVLDPVARTAREIRPFHFRLA
                     QAEPGVDVQVDVDRVEVRRVPPGSATPAPVPAPGEAVTVVRTEVNGAEPNVRVFTRGV
                     AIGGAARFAGTVGAHEPAEDLGEQVLEGLLVKGERLTDTIPAGAMGNERPIEIVTERW
                     YSNDIDALVRHRFFDPRIGETTYELVNVARGDPSPELFQVPQGYEITVVAGPSIAPLA
                     PMPPRGVPGQRVQIETRIAE"
     gene            complement(2398..>2736)
                     /locus_tag="VIQ99_07300"
     CDS             complement(2398..>2736)
                     /locus_tag="VIQ99_07300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182989.1"
                     /translation="VAVAAGIFTAVAGALAVLVDGQRSPPAPSQAAAPPATPFFVQPF
                     QPLQSAPRPSTAASYSVVRVRIPVSAFAMVPGSEEGGTIEADLLVGEDGLARGIRFIE
                     ADAWLASADQ"
BASE COUNT          476 a          970 c          900 g          390 t
ORIGIN      
        1 cgcttgaacc agatagcgca cccgaagcac accgcaaatg ccacgagcga tcccagcatc
       61 aaggccaacg acccgagcgc cgcgggcggc aactgcgtcg gatccgcgat gcgcgccgag
      121 attcgctggt gcacgaagat cgtgctgagg acgacgacgg ctggcgcgac gacgtacgag
      181 agagtgccga tgcggcgatg ccagatgcgg cggtgcgtgc ggatcagctg cgcctgcgcg
      241 acgagcatca cgagccaaag cgtcagagcg atcccgtgcg cgtggaacca gacattcggt
      301 tgctcgaaca gccgcgaaaa gtagctcggc cagaacgccc atacggccag cgcgagaaac
      361 acgacgaaca gccgcgcact gaagccagag agcgcgggtg ccaaacgagc gttcacttga
      421 cgatttctcc gaaaacggcg gcccgcgaac tctaagggaa gccaaccggg cgggtccagg
      481 cacaacgcgt attccgtcac gaaggcggca ggttcgcgcg tggacggccg tccgaacgtg
      541 atgtatttac tacctccgcg agctacgcgg cggcagattc gctcgtcgag ctcgagaacg
      601 cgcgcatgca acggcgactg ctgtgtctac tcttgcccct gaccgccatg ctcggcggct
      661 gcggcggcgc gtccgacgac gccggaccca agccgacgcc gatgccgccc acactcgccg
      721 gcacctacgc gggccagttt ccgtgcagca actgcgccgc gatcgccgca acgctctggc
      781 tacgtcccga tggacgcttc ttcctgcgcc agcaattcac ggatggggag gccgctgacg
      841 aggtcgccgc gagcggcccg tccgcgacgt acagcctcgg tcgttggacc tgggacgaga
      901 tcgcggccga ggccgtgctg cgcagcgccg gcccggaacg gcggctgatc gtcgtcgacg
      961 ccgatcgcct ccagctgcac gtcgcgtcgc cgaccgagca cgcgctcacg cgcgacacga
     1021 ccgtgccgcc gttcggcgat cgactcgcgc tcgacggcga gagcacggtg accgaacgcg
     1081 gcgcgacgtt cagagaatgc ctgacgggac tcgagctcgt cgtgtccgag agcggcctct
     1141 atcgcgagct caggcggcag caccgacgca tgaatccaaa aggccgcgtc gcgctgacga
     1201 cgatcgaggg tcatctcgtg accgtcacgc gcggatcgac gacgagcgag cagctcgtcg
     1261 tcgaccggtt cgtgaccatg aagcccggca caccgtgccc ggcgggccgc ggctgagcta
     1321 ctccgcgatc cgtgtctcga tttgcacgcg ttgacccggc acaccgcgcg gcggcatcgg
     1381 cgcgagtggg gcaatgctcg gaccggccac gacggtgatc tcgtagccct gcggcacctg
     1441 gaacaactcc ggcgacgggt cgccgcgcgc cacgttcacg agctcgtacg tcgtctcgcc
     1501 gatacgcggg tcgaagaacc gatggcgcac gagcgcgtcg atgtcgttcg agtaccagcg
     1561 ctccgtgacg atctcgatcg gacgctcgtt acccatggcg ccggccggaa tcgtgtccgt
     1621 gagtcgctcg ccctttacga gcaggccctc gagcacctgc tcgccgagat cctcggcggg
     1681 ttcgtgcgca ccgacggtgc ccgcgaaccg tgcagcaccg ccgatcgcga cgccgcgcgt
     1741 gaacacccgc acgttcggct cggcaccgtt gacctccgtg cgaactaccg tcacggcttc
     1801 accgggcgcg ggcacgggcg ccggcgtagc acttcccgga ggcaccctcc gaacctcgac
     1861 ccggtcgacg tctacctgga cgtccacacc gggctcagct tgcgcgagcc gaaagtggaa
     1921 cggtctgatc tcgcgcgcgg tccgcgcgac gggatcgagc acgtagctct tgtccgcaac
     1981 gggatcgttg atcgtgatca tcgtgaccgg ctcgcccgcg gtctgccacg gtccgacgcc
     2041 gccgatcgtt tgctctcgac gcgtgcgccc ctgcgaatcg cgatagatcc tcgcctcgtt
     2101 gcgctgcgtg atccggttgc cgtcggccag cgtctgcgtc gactgcgtga tcgagcgtgc
     2161 gctgtacggc ttgtccaaaa cgacgacgcc cggaatgtcg ccctcgccgc gcagaatatc
     2221 gatgcggccg ccgaaggcct ggatcggcat tgcattcgac aggaaaaaca cggtgtcctc
     2281 gggtggtgcg ggcggcgccg gcgcgggagc ctgcgcgccc gcggccgcga cgaaccccac
     2341 cgcaccggac aacaccgcga atgacgatcg cttcgagctc atgattcgat cctccgacta
     2401 ctgatccgcg gacgcgagcc acgcgtccgc ttcgataaac ctgattccgc gcgcgagccc
     2461 atcctctccg acgagcagat ccgcctcgat cgtgccgccc tcctcggagc ccggcaccat
     2521 cgcgaacgcc gacaccggga tccgcacccg cacgacgctg taggacgccg ccgtcgacgg
     2581 ccgcggcgcg ctctgcaacg gttgaaaggg ctgcacgaag aacggcgtcg cgggcggagc
     2641 cgccgcctgt gacggcgcgg gaggggatcg ctgcccatcg accagcacgg cgagtgcgcc
     2701 cgcgacggcc gtgaaaatgc cggccgcaac cgcgac
//
LOCUS       DATCUD010000498         1871 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90264, whole genome shotgun sequence.
ACCESSION   DATCUD010000498 DATCUD010000000
VERSION     DATCUD010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1871
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90264"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..840
                     /locus_tag="VIQ99_07305"
     CDS             <1..840
                     /locus_tag="VIQ99_07305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182990.1"
                     /translation="LSFAVACVAQPTEKDRMTSLGVELQTARALYDHLKAEAGNGQAL
                     TWRTVPDWTGIWTREASPFFWDPDQTSTTALPTAKLTPEHQRLLRDKLDKVSRGIEFD
                     PLSNCEPAGMPRWIVEPFLKEFVVTPGQTWLINEMQNEIRRIYTDGRDHPSEADAYPL
                     WEGDSIGFWDGDKLVIHTSQMRAGQYQRIQPFYTEQVETVEIWQKTDATTMVVHVWAF
                     DPPALAEPWYTRQVYKRLSNDDSSLRIRYWHCSENQNNVVEQTSTGTSDFSDFTFTDQ
                     DDQ"
     gene            851..1237
                     /locus_tag="VIQ99_07310"
     CDS             851..1237
                     /locus_tag="VIQ99_07310"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182991.1"
                     /translation="MRKTLACMLGSATLLAAPTFAHHSAVMFDDAKEITVTGTVKEFQ
                     YTNPHSWLLVDVKNDDGTVTTWGFEAEGPSTLTRAGIRRSDFTPGTAITITGNPMRDG
                     RPAALWVKATRGDGKDFDPRAGFVIK"
     gene            complement(1306..>1871)
                     /locus_tag="VIQ99_07315"
     CDS             complement(1306..>1871)
                     /locus_tag="VIQ99_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9182992.1"
                     /translation="IRGARYGVSRRGSGSHLMAVVHARDRGWPVDDLDFVIVRNLAGA
                     VDAFSTGAADVFFWEKFMTKPLVDAGKFRRVGEFAAPWPAFVACVADGASADQRAAFS
                     RALALVLEEARTLRARPDAAALIAERYELAVSDVVEWLATTRWSDRVGVAPRDLEAAC
                     AALDSLGVLARSVTARECIARDPAERQ"
BASE COUNT          379 a          627 c          577 g          288 t
ORIGIN      
        1 ctgtcgttcg ctgtggcctg cgtcgcgcag cccacggaga aagaccgaat gacttcgctc
       61 ggagtcgagc tgcaaacggc gcgcgcgctg tacgatcact tgaaggccga agccggcaac
      121 ggccaggcgc tgacctggcg cacggtcccc gactggaccg gcatctggac tcgcgaagcg
      181 agcccgttct tctgggatcc ggatcagacc tcgacgacgg cgctgccgac cgcgaagctc
      241 acgcccgagc accagcgcct gctgcgcgac aagctcgaca aggtcagccg cggcatcgag
      301 ttcgacccct tgagcaactg cgagcccgcc ggaatgccgc gctggatcgt ggagccgttc
      361 ctcaaggagt tcgtggtgac cccgggccag acctggctca tcaacgagat gcagaacgag
      421 atccgtagga tctatacgga cggccgcgat catcctagcg aagccgatgc ttatccgctc
      481 tgggagggcg actcgatcgg attttgggac ggagacaagc tcgtgatcca cacgagccaa
      541 atgcgcgccg gccagtacca gcggatccag cccttctata ccgagcaagt cgaaaccgtc
      601 gagatctggc agaagaccga tgcgacgacc atggtcgtgc acgtctgggc cttcgacccg
      661 cccgcgctcg cggagccctg gtacactaga caggtctata agcgtttgtc gaacgacgat
      721 tcgagtctgc gaattcgcta ttggcactgc agcgaaaacc agaacaacgt cgtcgagcaa
      781 accagcaccg gaacctcgga tttctcggat ttcacgttca cggaccaaga cgatcagtaa
      841 ggagatggcc atgaggaaga ccttggcatg tatgctcggc agcgcgactt tgctcgcggc
      901 gccgacgttc gcccaccatt cggcggtcat gttcgacgac gccaaagaga tcacggtcac
      961 gggcacggtc aaggagtttc aatacacgaa tccgcattct tggctgctcg tcgacgtcaa
     1021 gaacgacgac ggcactgtca cgacgtgggg cttcgaagcc gaaggcccga gcacgctgac
     1081 gcgcgcgggc atccgcagga gtgacttcac gcccggcacg gcgatcacga tcaccggcaa
     1141 cccgatgcgc gacggtcgcc cggcagcgct gtgggtcaaa gccacgcgcg gcgacggcaa
     1201 ggatttcgac cctcgcgcag gattcgtgat caagtagccc gcattcggcg aacaaagagc
     1261 aggcccgagc cgaccttcgg ctcgggcctt ttcttcgcgg cctcgttatt gccgttcagc
     1321 cggatcgcgc gcgatgcact cccgagcggt tacgctgcgc gcgagcacac cgagcgagtc
     1381 gagcgccgca caggcggcct cgagatcgcg cggcgcaacg ccgacacggt cgctccaccg
     1441 cgtcgtcgcg agccattcga cgacgtcgga aaccgcgagc tcatatcgct cggcgatcag
     1501 cgctgcggca tcgggccgcg cacgtagcgt gcgagcctct tccaatacca gcgccaatgc
     1561 tcgtgagaat gcagcgcgtt ggtcggcgct cgcgccgtcg gccacgcatg ccacgaacgc
     1621 gggccacggc gccgcgaatt caccgacgcg ccggaacttg ccggcatcga cgagcggctt
     1681 cgtcatgaac ttttcccaga agaacacgtc cgcggcgccg gtcgagaacg cgtcgaccgc
     1741 acccgcaaga ttgcgcacga tcacgaagtc gagatcgtcg acgggccagc cccgatcgcg
     1801 cgcatgcacg accgccatca gatgcgagcc tgaaccacgg cgactcaccc cgtagcgagc
     1861 cccccggatc t
//
LOCUS       DATCUD010000499         1571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76142, whole genome shotgun sequence.
ACCESSION   DATCUD010000499 DATCUD010000000
VERSION     DATCUD010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76142"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="VIQ99_07320"
     CDS             <1..297
                     /locus_tag="VIQ99_07320"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9182993.1"
                     /translation="RPVTLTGSVTKVEWTNPHAWFYLDVKGAGGEVQGWAVEIVSANG
                     LLRRGWTRETVKVGDVITVEGFGSRDGTNTANASAVIRPSSGERLWDSAPADRN"
     gene            426..623
                     /locus_tag="VIQ99_07325"
     CDS             426..623
                     /locus_tag="VIQ99_07325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182994.1"
                     /translation="MRADEAKPLRDAARLAAEWCLRKLESRVGGSGRDYSYSETERAA
                     LHVAHSIAVSEIARLEAAIAG"
     gene            768..968
                     /locus_tag="VIQ99_07330"
     CDS             768..968
                     /locus_tag="VIQ99_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182995.1"
                     /translation="MKSEQAKPLQVAAQQAAKWCMQKLEMKEGGYGKNFEHSESERAA
                     LHVAHSIAVCEVARLQLIVEGR"
     gene            1096..>1571
                     /locus_tag="VIQ99_07335"
     CDS             1096..>1571
                     /locus_tag="VIQ99_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9182996.1"
                     /translation="MRRMKRALAVAVVALLGSVAVSAQQTAKIDFKSVGRAAPLLVDI
                     NEQDMVGAAIRRSFGQPQPAADEGQLIGSREAPPGVEPLPIDLFTSKDFYRDRALWSD
                     QRYFRCNSSAALEDAWGGNRRGTIGDNPPASAAWGLCDRDYPRESIVSPYPFETAE"
BASE COUNT          285 a          475 c          547 g          264 t
ORIGIN      
        1 cggcccgtta cgctgaccgg cagcgttacg aaagtagagt ggacgaatcc tcacgcctgg
       61 ttttacctgg acgtgaaggg ggccggcggc gaagtccaag gttgggcggt ggaaattgtc
      121 agcgccaacg gacttctgcg acgcggttgg acgcgagaga cggtgaaggt cggcgatgtc
      181 atcaccgtgg agggtttcgg ctcgcgagac ggcaccaaca cggcgaacgc gtccgctgtg
      241 atcaggccga gctcgggcga gcgactttgg gatagcgccc cggctgatcg caactgagcc
      301 ccggccaagt cgccgtccgc ggctttcgga tccagagcgc gcggctcacc gagcttttct
      361 agcgggtgcg gcgttgcgcg ttgtgacaag atggtccgtc ccgaaacacg tcccggaggc
      421 acgatatgag agcagatgaa gcgaagccac tacgggacgc ggcacgactc gctgccgagt
      481 ggtgcttgcg gaagctcgag tcgcgagtcg gtggctccgg gcgggattat tcgtactccg
      541 aaaccgagcg cgcggcgctg cacgtggcgc attccattgc ggtcagcgag atcgcgcgac
      601 tcgaggccgc gatcgcgggt tagagcgctc gagtgccgat gcgcgtgcga ttctgtgacg
      661 cgcgtaccgc tatgtcggcg aaacctgcca cgcaggcgcg tgtattcccg aagccatgtg
      721 ccacgatggt cgcccatctg gctttcggat cgccgtggag gcgcccaatg aaatcggagc
      781 aagccaagcc gctgcaagtc gctgcccaac aggccgcgaa gtggtgcatg caaaagctcg
      841 aaatgaagga aggcggttac ggaaagaatt tcgagcactc ggaatccgaa cgggccgcgc
      901 tgcatgtcgc gcactcgatc gctgtatgcg aggtcgcgcg actccaactg atcgtcgaag
      961 gtcgttagcc gcgctcgaag cagcatcctc cccagctaga cgctcgacat tgcgcagcgc
     1021 tgcgtcgtgt ggcgaacgta gcgttttgaa cttaccatcc tccgtcgagc tcgaccgagc
     1081 tttcgcgggg gaagcatgag aagaatgaag cgggcgctcg ccgtggcggt agtcgcgctg
     1141 ttggggtcgg tggccgtgag tgcgcagcag acggcgaaga tcgatttcaa gagcgtgggc
     1201 cgtgcggcgc cgcttctggt cgacatcaat gaacaggaca tggtcggcgc cgcgattcgg
     1261 cgctcgttcg gccagccgca gccggccgcg gacgaaggcc agctgatcgg ctcgcgcgag
     1321 gcgccgcccg gggtcgagcc gctgccgatc gacctcttca cgtcgaagga tttctatcgg
     1381 gaccgggcgc tctggtccga tcaacgctat ttccgctgca acagctcggc cgcgctcgag
     1441 gacgcgtggg gcggcaaccg ccgcggcacg atcggcgaca acccgccggc gtcggccgcg
     1501 tggggcctgt gcgaccgcga ctatccgcgc gaatccatcg tgagcccgta tccgttcgag
     1561 acggccgaag a
//
LOCUS       DATCUD010000500         6432 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61462, whole genome shotgun sequence.
ACCESSION   DATCUD010000500 DATCUD010000000
VERSION     DATCUD010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6432
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61462"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..1448
                     /locus_tag="VIQ99_07340"
     CDS             3..1448
                     /locus_tag="VIQ99_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011381889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEY9182997.1"
                     /translation="MWLGLAIFAASLISLLGFDVVGWMVRPRPWEWTNVANEFAWSKW
                     LAPAGTGYADWHPLVAFLTTYAVFTSLFAIGARFLGLDVRRFVLGFSVLFVVTWAAWV
                     LGNELHLTMVDATVDGRNRYAEAALSWGLQLGEGAPYLLALAAGLAIGNFAKGFAARL
                     AEAARPEWYIKTAIVFLGVNLGAQTLEASGFAVELILTGAAATFVAYMFFWPIVYALA
                     RRAFGFKRDVAAVLASGISVCGVSAAIATAGAIRAKPVIPVAISMVVVIFAMIELIVL
                     PGLYTGAFPDQPIVNGAALGMTVKTDGADAAAGALLDELMIARNLQLTGQQWQAGWIL
                     SASLLTKIWIDVFIGLWAFLLALVWIRKVDGRGGAVRVSPMEIWFRFPKFVLGYFIAW
                     FVYLAIAAQGAEVASTLDAGTAVVQSPMRTMLFMLTFVAMGVSTDFAKLKGMGKVALL
                     YGIALVVVIAPIAYAVAYLFHRGLTPPLVAP"
     gene            1466..2974
                     /gene="glpK"
                     /locus_tag="VIQ99_07345"
     CDS             1466..2974
                     /gene="glpK"
                     /locus_tag="VIQ99_07345"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013640795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEY9182998.1"
                     /translation="MSRYVGAIDQGTTSSRFMLFDQAGTVIAAAQREHAQIYPQPGFV
                     EHDAAEIWRNTEAVIGEALMKGGVRAGELAAVGITNQRETTVLWDRNTGAPLHNALVW
                     QDTRTADLVAAYSRDGGQDRFRAHTGLPLATYFSGLKLRWLLDNVSGARAKAVAGNVL
                     FGTIDTWILWNLTGGALGGVHLTDVTNASRTQLMDLETLDWDDELLAAFEIPRAVLPR
                     IAPSSASYGAAQISKLKGVPIAGILGDQQAALVGQTCFEPGEAKNTYGTGCFMLMNTG
                     LRPVPSTAGLITTVAYQLGDEPAHYALEGSIAIAGALVQWLRDNLGLIAKSSDVEALA
                     RQVADNGDVYFVPAFSGLFAPYWRDTARGVVTGLTRYANRGHIARAALEAVAYQTRDV
                     LEAMEKDSGIAIKELRVDGGMVSNELLMQFQSDQLGVPVVRPRVTETTALGAAYAAGL
                     AVGYWASTAELVRNWGVEKRWQPQMAAGERARLYGAWQKAVRRSFDWVDRPA"
     gene            2994..3716
                     /locus_tag="VIQ99_07350"
     CDS             2994..3716
                     /locus_tag="VIQ99_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MIP/aquaporin family protein"
                     /protein_id="HEY9182999.1"
                     /translation="MQGFLGELIGTMTLILLGNGVVAGVTLKGSYAENGGWIVITTAW
                     GLAVICAVIVALAVGSNAHLNPAVTIGVGIATGEWSQAPTYIAAQFLGALLGAVLVWL
                     HYLPLWRQTDNPAGKRACFCTSPAVRHTPSNALSEIIGTFVLVFVAAAISSDNLSPNG
                     LAPGFGPFLVGLLVWGIGLSLGGMTGYAINPARDLGPRIAHTVLPIPGKGTSGWDYAA
                     IPILGPVIGAVLAGLAVAAIGI"
     gene            3820..5265
                     /locus_tag="VIQ99_07355"
     CDS             3820..5265
                     /locus_tag="VIQ99_07355"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEY9183000.1"
                     /translation="MAVDFRGHPMFAPGFNSPTRFEADVYDCEVWGQIPTDIEGTFYR
                     VQCDFQYRPPMNEWPTGFNGDGHVSAFRFANGSVDFKARYVKTDRLMAERRARKRLWG
                     VYRNHYTDDPSVANIDRGAANTHIYWHGGKMLVLKEDALPYHIDPFSLETLGRWDFHG
                     KWTATSMSAHPKIDPLTGEMIAYGYQAKGDLSDDIAVYTINPQGHIVHEVWFKSPYLG
                     IIHDIAITQKYVIIPVISRTTSEERLRSGEPMWEWKGDLPTMVGILPRDGEARDVRWF
                     KGPSRNTLHFLNATDNGSTVTMELPVSDEERSPSHIKRWTFDMSSRSKDTFGEEVISR
                     ANGVLARMDDRYLSLPYRYGYVGHNDPERPYDTAAGGNRAGRVTNCFKRFDLRNTSAP
                     ESTFFVGNVQSLQEPGFIPRKGSTAEGDGYVVGIASNYAEMASELHIVDAQRMEEGAV
                     AVVKLPFRLRGGTHVNWFSADDLMAQKAETV"
     gene            5262..5528
                     /locus_tag="VIQ99_07360"
     CDS             5262..5528
                     /locus_tag="VIQ99_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183001.1"
                     /translation="MSRATLDRRKFIAGAGAAVAGVCLPVTLAVAAPAVGGASLSAAL
                     ADWHIDDMWGVHPRPHEAIGYGRPRGDGELVAGVAAADLAFLNA"
     gene            complement(5538..5942)
                     /locus_tag="VIQ99_07365"
     CDS             complement(5538..5942)
                     /locus_tag="VIQ99_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013477661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3052 family protein"
                     /protein_id="HEY9183002.1"
                     /translation="MAGYSGTPLAKKLGITEQANVVAVDAPNGYRRLLGPLPAAVRFS
                     SKIDKAVDIVHVFSTKKSELERALASYRKNLSSDAAVWVSWPKKSSNVPSEITEDVVR
                     ELALPLGFVDVKVCAVDETWSGLKLVVRKELR"
     gene            complement(5950..6348)
                     /locus_tag="VIQ99_07370"
     CDS             complement(5950..6348)
                     /locus_tag="VIQ99_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183003.1"
                     /translation="MKIIDNVLKVVLSLILALPILGTFGIFPPPTQDLYNTPEAFQFI
                     STLTEIRYINVIMSVVHLIALFFLWTRRTALAALLVLPITVNVVAFHLVLDGGLLTAG
                     AVLGNVMLLINLYFLWTRQRELASLWARTS"
BASE COUNT         1056 a         2015 c         2214 g         1147 t
ORIGIN      
        1 gcgtgtggct cgggctcgcg atcttcgcgg cgagcctgat ctcgctcttg ggattcgacg
       61 tcgtcgggtg gatggtgcgt ccgcgtccgt gggagtggac caacgtcgcg aacgagtttg
      121 cgtggagcaa atggctcgcg ccggccggca ctggctacgc ggattggcac ccgctcgtcg
      181 cgtttctgac gacctacgcg gtcttcacga gcctgttcgc gatcggcgcg cgcttcttgg
      241 gtttggacgt gcgccgcttc gtgctcgggt tcagcgtgct gttcgtcgtg acgtgggccg
      301 cgtgggtgct cggcaacgag ctgcacctga cgatggtcga cgcgaccgtc gacggccgca
      361 atcgctacgc cgaggccgcg ctgtcgtggg gcttgcagct cggcgaaggc gcgccgtatc
      421 tgctcgcgct cgccgcgggg ctcgcgatcg gcaatttcgc gaagggcttc gcggctcggc
      481 ttgccgaggc ggcgaggccc gagtggtaca tcaagaccgc gatcgtgttc ctgggcgtga
      541 acctgggggc acagacgctc gaggcgagcg gcttcgcggt cgagctgatc ctgaccggtg
      601 ccgcggcgac cttcgtcgcg tacatgttct tctggccgat cgtgtatgcg ctcgcgcggc
      661 gcgccttcgg cttcaaacgt gacgtcgcgg ccgtgctcgc gtccggcatc tcggtctgcg
      721 gcgtctcggc cgcgatcgcg acggccgggg cgatccgcgc gaagcccgtg attcccgtgg
      781 cgatctcgat ggtcgtggtg atcttcgcga tgatcgagct gatcgtgctg ccgggcctgt
      841 acacgggcgc gttcccggat cagccgatcg tgaacggcgc cgcgctcggc atgaccgtga
      901 agaccgacgg cgcggacgcc gcggccggcg cgctgttgga cgagctgatg atcgcgcgca
      961 atctgcagct cacgggccag cagtggcaag caggctggat cttgagcgcg tcgttgctga
     1021 cgaagatctg gatcgatgtc ttcatcggcc tgtgggcgtt cttgctcgcg ctcgtctgga
     1081 tcagaaaggt cgacgggcgc ggtggcgccg tccgcgtgag tccgatggag atctggttcc
     1141 gcttcccgaa gttcgtgctc ggctatttca tcgcgtggtt cgtgtatctc gcgatcgcgg
     1201 cgcaaggagc ggaagtcgcc tcgactctcg acgccggtac cgcggtcgtg cagagcccga
     1261 tgcgcacgat gctgttcatg ctcactttcg tcgcgatggg cgtcagcacg gatttcgcaa
     1321 agttgaaggg catgggcaag gtcgcgctgt tgtacggcat cgcgctggtc gtggtcatag
     1381 ctccaatcgc ctacgccgtc gcatatctgt tccaccgcgg cttgacgccg ccgctggtcg
     1441 cgccgtgatc taagggagcg agctcatgag tcggtatgtc ggcgcgatcg atcaaggcac
     1501 cacgagcagc cgtttcatgc tgttcgacca ggctggaacc gtgatcgcgg ccgcgcagcg
     1561 cgagcatgcg cagatctacc cgcagcccgg gttcgtggag cacgatgcgg ctgagatctg
     1621 gcgcaacacg gaagccgtga tcggtgaggc gctcatgaaa ggcggagtcc gcgccggcga
     1681 gctcgcggcc gtcggcatca cgaatcagcg cgagacgacc gtgctctggg accgcaacac
     1741 cggcgcgcct ttgcacaacg cgctggtctg gcaggacacg cggaccgcgg atctcgtggc
     1801 cgcgtactcg cgcgatggtg gccaggaccg cttccgcgcc cacaccgggc tgccgctcgc
     1861 gacctatttc agcgggctga aactgcgctg gctgctcgac aacgtgagcg gtgcacgcgc
     1921 gaaggccgtc gccggtaacg tgctgttcgg cacgatcgac acgtggatcc tctggaatct
     1981 gaccggcggc gctttgggtg gcgtgcattt gaccgacgtc acgaacgcga gccgcacgca
     2041 gctcatggat ctcgagacac tcgattggga cgacgagttg ctcgcggcat tcgagattcc
     2101 gcgcgccgtg ttgccgcgga tcgcgccgtc gagcgcgagt tacggtgccg cgcagatctc
     2161 gaagctgaag ggcgtgccga ttgcagggat cctcggcgat cagcaggccg cgctcgtcgg
     2221 tcaaacgtgc ttcgagcccg gcgaggccaa gaacacgtac ggcacgggct gtttcatgct
     2281 catgaacacg gggttgcgcc cggtaccctc gaccgcgggg ctgatcacga ccgttgcgta
     2341 tcagctcggt gacgagccgg cgcactacgc gctcgaaggg tcgatcgcga tcgcgggcgc
     2401 gctcgtgcag tggctgcgcg acaacttggg actgatcgca aagagctccg acgtcgaggc
     2461 gctcgcgcgc caagtcgccg acaacggcga cgtgtacttc gtgcccgcgt tctcgggcct
     2521 gttcgcgccg tactggcgcg acacggcgcg cggcgtcgtc acgggtctca cgcgctacgc
     2581 gaatcgcggc cacatcgcgc gcgcggcgct cgaggccgtg gcttatcaga cccgcgacgt
     2641 gctcgaggcg atggagaagg actccggcat cgcgatcaag gagctgcgcg tcgacggtgg
     2701 catggtctcg aacgagctct tgatgcagtt ccagtccgat cagctcggcg tgcccgtggt
     2761 gcgcccgcgc gtgaccgaga ccacggcgct cggcgcggcc tacgcggccg ggctcgcggt
     2821 cgggtactgg gcgagcacgg ccgagctcgt gcgcaattgg ggtgtggaaa aacgctggca
     2881 accgcagatg gccgcgggcg agcgcgcccg actgtacggc gcgtggcaga aagccgtgcg
     2941 gcgctcgttc gattgggtgg accggccggc ttgagcgggt gggagagggg agcatgcaag
     3001 ggtttctcgg cgagttgatc ggcacgatga cgttgatcct cttgggcaac ggtgtcgtcg
     3061 ccggcgtgac gctgaaaggc tcgtacgccg agaacggcgg ctggatcgtg atcacgacgg
     3121 cgtggggcct cgccgtgatc tgcgcagtga tcgtcgcgct cgccgtcggc agcaacgcgc
     3181 atttgaaccc ggccgtcacg atcggagtcg gcatcgcgac gggcgagtgg agccaagcgc
     3241 ccacctacat cgccgcgcaa tttctgggcg cgctgctcgg cgccgtgctc gtctggctgc
     3301 attacttgcc gctttggcgt cagaccgaca atccggctgg caagcgcgcg tgcttctgca
     3361 cgtcgccggc cgtgcggcac acgccgtcga acgcgctcag cgagatcatc ggcaccttcg
     3421 tgctcgtgtt cgtcgcagca gcgatctcat cggacaattt gtcgccaaac ggcttggcgc
     3481 cgggattcgg gccgttcctg gtcgggctgc tcgtgtgggg catcggcttg tcgttgggcg
     3541 gaatgacggg ctacgcgatc aatcccgcac gcgatctggg gccgcgtatt gcgcacacgg
     3601 ttctgccgat cccgggcaag ggcacctccg gctgggatta cgccgcaatt ccgattctcg
     3661 ggcccgtgat cggggccgtg ctcgcggggc ttgccgtcgc cgcgatcggc atctgacgaa
     3721 accgcgacgt aggcggtatc ggggacagcg ctcgcgcccg gcggcgatgc cggggagaat
     3781 cggcgtacac ttacggcatt aacggaaggg ggatggcgca tggccgtcga tttcaggggt
     3841 catccgatgt tcgcgccggg cttcaacagc cccacgcgtt tcgaggcgga cgtttacgac
     3901 tgcgaggtct ggggccagat cccgaccgac atcgaaggca cgttctatcg cgtgcagtgc
     3961 gatttccagt accggccgcc gatgaacgag tggcccacgg gcttcaacgg cgacggccac
     4021 gtcagcgcgt tccggttcgc gaacggctcc gtcgatttca aagcgcgtta cgtgaagacg
     4081 gatcgcttga tggccgagcg gcgcgcgcgc aaacggctct ggggcgtgta ccgcaatcac
     4141 tacaccgacg acccgtcggt cgcgaacatc gaccgcggcg cggcgaacac acatatctat
     4201 tggcacggcg gcaagatgct ggtgctgaaa gaagacgcgc tgccgtatca catcgacccg
     4261 ttctcgctcg aaacgctcgg ccgctgggac ttccacggca agtggactgc gacgagcatg
     4321 tcggcgcatc cgaagatcga tcccttgacc ggcgagatga tcgcgtacgg ttatcaggcc
     4381 aaaggcgatc tgtccgacga catcgctgtc tacacgatca acccgcaagg gcacatcgtc
     4441 cacgaggttt ggttcaagtc gccgtacttg gggatcattc acgacattgc gatcacgcag
     4501 aaatacgtga tcatccccgt gatctcgcgc acgacgagcg aagaacgttt gcgcagcggc
     4561 gagccgatgt gggagtggaa gggggatctg ccgacgatgg tcggcatcct gccgcgcgac
     4621 ggcgaggccc gcgacgtgcg ctggttcaaa ggcccgtcgc gcaatacgct gcacttcttg
     4681 aacgcgaccg acaacggcag cacggtcacg atggagctgc ccgtctcgga cgaggagcgc
     4741 tcgccgtcgc acatcaagcg gtggacgttc gacatgagct cgcgcagcaa ggacacgttc
     4801 ggcgaggaag tcatctcgcg cgcgaacggc gtgctcgcgc gcatggacga ccggtacttg
     4861 tcgctgccgt accgctacgg ctacgtcggt cacaacgatc ccgagaggcc gtacgacacg
     4921 gccgccggcg gcaaccgggc aggacgtgtc acgaactgct tcaagcgctt cgatctgcgg
     4981 aatacgagcg cgcccgagag cacgttcttc gtcggcaacg tgcagagcct gcaggagccc
     5041 ggattcatcc cgcgcaaggg cagcacggcc gagggcgacg gctatgtcgt cggcatcgcg
     5101 agcaactacg ccgagatggc gagcgaactc cacatcgtcg acgcgcagcg catggaagag
     5161 ggcgccgtgg ccgtcgtgaa gctgccgttc cgcttgcgcg gcggcacgca cgtgaactgg
     5221 ttcagcgccg acgacctcat ggcgcagaag gcggagaccg tatgagccgc gctactctcg
     5281 accggcgcaa gttcatcgcc ggcgcgggcg ccgctgtggc cggggtttgc ttgcccgtga
     5341 cgctcgcagt cgcggcgccc gcggtcggtg gcgcgtcgtt gtcggctgcg ctcgcggatt
     5401 ggcacatcga cgacatgtgg ggtgtgcatc cgcggccgca cgaggcgatc ggttacggcc
     5461 ggccgcgcgg cgatggcgag ctggtcgcgg gagtggccgc tgcggatctg gccttcttga
     5521 acgcctgatc tagacgttca gcggagctct ttgcgcacga cgagcttgag ccccgaccag
     5581 gtttcgtcga ccgcgcatac cttcacgtcg acgaagccga gcggaagcgc aagctcacga
     5641 acgacatcct cggtgatttc ggacggcacg ttcgaggatt ttttcggcca cgacacccag
     5701 accgccgcat ccgagctcag gtttttccga tagctcgcga gcgctcgctc gagctcggac
     5761 ttcttcgtgc tgaacacgtg gacgatgtcg accgccttgt cgatcttcga agaaaaccgc
     5821 accgccgcgg gtagcggccc gagcaagcgg cggtatccgt tcggcgcgtc gacggcgacg
     5881 acgttcgctt gctccgtgat cccgagcttt ttcgcgagcg gcgttcctga gtaacccgcc
     5941 acgcaagcgc tatgacgttc gtgcccagag cgacgccaat tcgcgctggc gtgtccacaa
     6001 gaaatacaga ttgatcagca gcatcacgtt gccgagcacg gccccggccg tcagcaagcc
     6061 gccgtcgaga accaaatgga acgcgacgac gttgacggtg atcggcagga ccagcagcgc
     6121 cgcgagtgcg gtgcgtcgtg tccacaggaa gaacagcgcg atcaggtgca cgaccgacat
     6181 gatgacgttg atgtaacgga tctccgtcag cgtcgagatg aactgaaacg cttccggagt
     6241 gttgtacagg tcttgcgtcg gcggaggaaa aatcccgaac gtgcccagga tcggcagcgc
     6301 gaggatcaag ctcagcacca ccttgagaac gttgtcgatt attttcatcg cgttcgaccc
     6361 ccctttccga atgccggccg attatacgcg gcccgtggct cagtccttgt cgagggtcaa
     6421 gtcctgcggg gt
//
LOCUS       DATCUD010000501         1654 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5295, whole genome shotgun sequence.
ACCESSION   DATCUD010000501 DATCUD010000000
VERSION     DATCUD010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5295"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VIQ99_07375"
     CDS             complement(<1..225)
                     /locus_tag="VIQ99_07375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183004.1"
                     /translation="MRLTVVCLAIVVGTSPAYGQRRKGDTGAVERACGVTECFFERDI
                     RGFEVIDQTHLIVYVGSQRCAFHVELYGTAC"
     gene            complement(308..1246)
                     /gene="glpQ"
                     /locus_tag="VIQ99_07380"
     CDS             complement(308..1246)
                     /gene="glpQ"
                     /locus_tag="VIQ99_07380"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: protein motif:HMM:NF008354.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEY9183005.1"
                     /translation="MSDAPIVIAHRGASGYLPEHTLAAKALAHGLGADFLEQDVVATR
                     DRHLVVLHDIHLDDVTDVAERFPERRRDDGRHYVLDFDLAELEQLKVFERRAPGQNTA
                     KYPQRFPADRGIFRIATLRDELRLIQGLNRSTGRNVGIYPEIKNPHWHHQHGIDLARL
                     LIDELNAFGYSHATDAAFVQCFDHHELARVKHELNCALRLVQLVGSEPEHADLLTAQG
                     LEHIAAYAHGLGPSYRQLAEIRAGRLCLAPVTRLAHEAGLRLHAYTFRRDDLGGYAQT
                     LDELLEFFFVEARVAGVFCDHPDVAVRVRNALREVQ"
     gene            complement(1271..>1654)
                     /locus_tag="VIQ99_07385"
     CDS             complement(1271..>1654)
                     /locus_tag="VIQ99_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183006.1"
                     /translation="VFEYLEALPNFFYRNVSVPDHVPQTGGKEALKEEYRTQLKTAEV
                     VVVLSSLYIENEYWTTYQMDAAQASNLPLVALEPFGGNVKVPAEVAKRAAEVVGWNER
                     AMIDAIRRQARHENTARWDTIEFKL"
BASE COUNT          297 a          521 c          514 g          322 t
ORIGIN      
        1 gcaagccgtg ccatagagct cgacgtgaaa cgcgcagcgc tgcgaaccaa cgtaaacgat
       61 caagtgagtt tggtcgatga cctcgaagcc acggatgtcg cgctcgaaga agcactcggt
      121 gacgccgcag gcgcgttcga ccgcgccggt gtcccctttc cttcgttggc catacgccgg
      181 gctggtcccg acgacgatgg ccaagcagac gaccgtcagt ctcatggtcg cactccgatt
      241 cctcgtccca ctctaggcag ttttccgcgg actgtccatg ccgcgcagtg gcgatttttt
      301 gctcagttca ttgaacctcg cgcagcgcgt tgcgaacccg caccgcaacg tccgggtggt
      361 cgcagaaaac gcccgcgacc cgtgcctcga cgaaaaagaa ctcgagcaac tcatccagcg
      421 tctgtgcgta accgcccagg tcgtcgcgcc tgaacgtgta cgcgtgcagg cgtagcccag
      481 cctcatgcgc aagcctcgtg accggcgcaa ggcacaggcg cccggcgcgg atttcggcga
      541 gctgccgata gctcgggccg agtccgtgcg catatgccgc aatgtgttcg agcccctgcg
      601 cagtcagcaa atcggcgtgc tcgggttccg agccgacgag ctgcaccaac ctgagtgcgc
      661 agttcagctc gtgcttgacc cgagccagct cgtgatgatc gaagcattgt acgaacgccg
      721 catccgttgc gtgcgagtag ccgaacgcgt ttagctcgtc gatcaataat cgagcaaggt
      781 cgatcccgtg ttggtggtgc cagtggggat tcttgatctc cgggtagatc ccgacatttc
      841 ggccggtcga gcggttgagc ccctgaatga gacgcagctc gtctctgagc gtcgcgatcc
      901 gaaagatgcc gcggtcggcg gggaaacgtt gcggatactt cgcggtgttc tgccccggtg
      961 cgcggcgttc gaacaccttg agctgctcga gctccgcgag atcgaagtcc aggacgtagt
     1021 ggcgcccatc gtcgcggcgc cgctccggga aacgctcggc tacgtcggtg acgtcgtcga
     1081 gatgaatgtc gtggagcacg acgaggtgcc ggtcacgcgt cgcgacgaca tcttgctcga
     1141 ggaagtctgc gccgaggccg tgagcgagag ccttggccgc gagggtgtgc tcgggtagat
     1201 aaccgctggc gccgcggtgc gcgatcacga tcggagcgtc gctcatgccg gggcgccgtt
     1261 cgcgtgagcg tcagagcttg aattcgatcg tgtcccagcg agccgtattc tcatggcgag
     1321 cttgtcgccg gatcgcatcg atcatggctc tctcgttcca cccgacgacc tcggccgccc
     1381 gcttggcgac ttccgccggt accttgacgt tcccgccgaa tggctcgagc gccacgagcg
     1441 gcagattgct ggcctgagca gcatccatct gatacgtggt ccagtactcg ttctcgatgt
     1501 acaacgagct cagcaccacg acgacctctg cagtcttgag ctgagttcga tactcttcct
     1561 tcagtgcttc cttgccgccc gtctgaggga cgtgatccgg aacgctcacg ttacggtaga
     1621 aaaaattcgg caacgcttcg aggtactcga acac
//
LOCUS       DATCUD010000502         4226 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_104228, whole genome shotgun sequence.
ACCESSION   DATCUD010000502 DATCUD010000000
VERSION     DATCUD010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4226)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4226)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4226
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104228"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2845)
                     /locus_tag="VIQ99_07390"
     CDS             complement(<1..2845)
                     /locus_tag="VIQ99_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003104015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CusA/CzcA family heavy metal efflux RND
                     transporter"
                     /protein_id="HEY9183007.1"
                     /translation="MLEYLVDRSVRHRWLVLLAVAALAAFGAFNYTRLTIDAVPDITN
                     VQVQINTEAPGFSPLEAEQRITFPVETAMAGLPRLDYTRSVSRYGLSQVTVVFEDGTD
                     IYFARQRVAERLQEARANLPPGLEPELGPIATGLGEIFAFVLSVAPGARRADGTPYDT
                     SDLHTVMDWVVRPQLARVPGVTEINMIGGHERQYVVAPHPTALLAFGLTLGDLAAALE
                     RNNVNVGAGYIERFGNQYLVRVPGQVASLDDIRAIRVATHEGTPVVIGDVAEVEIGKD
                     LRTGAATMNGEEVVLGTVFMLMGENSRIVARAAADKLAEVNRSLPEGLRLDAVYDRTT
                     LVDKTIATVRTNLFEGALLVIAVLFALLGNLRAALVTTLVIPLSMLLTITGMVEARVS
                     GNLMSLGALDFGLIVDGAVIIVENCLRRLAAAQGGGAPLPLAQRLEVVREATTEVVRP
                     SLFGLFIILVVYLPIFALSGVEGKMFHPMAITVSLALTAALVLSVTFVPAAVAVLVRG
                     KVAAHENAVMRAAKRVYEPLLRAALRHSVTAVAGALLLVALGGALATRMGSEFIPSLD
                     EGDIALHALRIPSTGIEQAIGMQLQLDSRLAEFPEVERVFAKLGTADIATDPMPPSVA
                     DTYVILKEREDWPDPRKPKDELVREIEAAAARVPGNNYEFTQPIEMRFNELISGVRAD
                     VAVKVYGDDLETLLAVGGEIEAILSGVPGGADVALEQMSGLPMLTVRPRRAVLARYGL
                     DVADVQDVVSTAIGGKAVGEIFEGDQRFDLVIRLPESIRNDPLALAALPVPLAGGGYV
                     PLRELATVDVVEGPNAINRENGKRRAVVTANVRGRDLGSFVAEARERIEADVDLPANY
                     WLEYGGSFEQLISGAERLRLVVPITLLMILMLLYLAFRSLSDSLLIFSGVPLALTGGV
                     LALWLRDIPLSISAGVGFISLSGVAVLNGIVLVS"
     gene            complement(2865..4097)
                     /locus_tag="VIQ99_07395"
     CDS             complement(2865..4097)
                     /locus_tag="VIQ99_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007187079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9183008.1"
                     /translation="MNKSHWILIALLSTAGCEPNTPSSAEEHADERAAEEAARGPNGG
                     RLLTDGEFTLELAIFESGVEPEFHAWATEGGQALRPSDVTLVVELARLGGKVDRIDFA
                     PQAEFLRGTRTVEEPHSFDVTVIARHDGEQHRFEYASYEGRTTIAADVARDAGIGTAT
                     AGPGVIGDELLLYGAIGPDTTRIREVHARFAGLIRTVTRNVGDAVRAGETLATVESNE
                     SLQTYSVTAPIAGTITQRHAAPGEQTDEEGLFEIADFSSVWAELDVFSRDRPRLREGL
                     PVAISTDNGLTAMGTIAYLAPVGNRASQSLTARVVLDNADGRWTPGQFVEGRVTIATA
                     PVDVAVPLSALQRFREFDVVFAQVGDTYEVRMLTLGRRDAHSVEVLSGLAPGTTYVTD
                     NSYLIKADIEKAGASHDH"
BASE COUNT          670 a         1454 c         1446 g          656 t
ORIGIN      
        1 acgacacgag cacgatgccg ttcagcaccg cgacgccgga caacgagatg aacccgacgc
       61 cggccgagat cgacagcggg atgtcgcgca gccacagagc gagcacaccg ccggtcagcg
      121 ccagtggcac gccgctgaag atcaacagcg aatcgctgag cgaccggaac gcgagataca
      181 gcagcatcag gatcatcagt agggtgatcg gcacgacgag ccggagccgc tcggcgcccg
      241 agatcagctg ctcgaagctg ccgccatact cgagccaata attggccggc aggtccacgt
      301 cggcctcgat gcgttcgcgc gcttctgcga cgaacgagcc caagtcgcgg ccgcgcacgt
      361 tcgccgtgac gacggcacgg cgcttgccgt tctcgcgatt gatcgcgttc gggccttcga
      421 cgacgtccac ggtcgcgagc tcgcgcagcg gcacgtagcc gccgcccgcg agcggcaccg
      481 gcaatgccgc cagcgcgagc ggatcgttac ggatgctctc cggcagccga atcacgaggt
      541 cgaagcgttg gtcgccctcg aagatctcgc cgactgcctt accgccgatc gccgtcgaca
      601 cgacgtcctg cacgtccgcg acgtcgagcc cgtaacgcgc gagcacggcg cgccgcgggc
      661 gaaccgtcag catcggcagg ccggacatct gctcgagcgc gacgtcggcg ccgcccggca
      721 cgccgctcaa gatcgcctcg atctcgccgc cgaccgcgag cagcgtctcg aggtcgtcgc
      781 cgtagacctt gaccgcgacg tcggcccgca cgcccgagat cagctcgttg aagcgcatct
      841 cgatcggttg cgtgaactcg tagttgttgc cgggcacgcg tgccgcggct gcctcgatct
      901 cgcgcacgag ctcgtccttc ggcttgcgcg ggtccggcca gtcctcgcgc tccttgagga
      961 tcacgtaggt gtccgccacg gacggtggca tcgggtccgt cgcgatatcg gccgtgccga
     1021 gcttcgcgaa cacgcgctcg acctcgggaa actccgcgag ccgcgagtcg agctgcagtt
     1081 gcatgccgat cgcttgctcg atgccggtgc tcgggatccg cagcgcgtgc agcgcgatgt
     1141 cgccttcgtc caagctcggg atgaactcgc tgcccatccg cgtcgcgagt gcgccgccga
     1201 gggcgacgag caacagcgca ccggccacgg ccgtcacgct gtggcgcaag gccgcccgca
     1261 gcagcggctc gtagacgcgc tttgcggcac gcatcacggc gttctcgtgc gccgcgacct
     1321 tgccgcgcac gagcacggca acggcggccg gcacgaacgt cacgctgagc acgagagccg
     1381 cggtcagtgc gagcgacacc gtgatcgcca tcgggtggaa catctttccc tcgacgcccg
     1441 acagcgcgaa gatcggtaga tacacgacga ggatgatgaa cagaccgaac aggctcgggc
     1501 gtacgacctc ggtcgtcgcc tcgcgcacga cctcgaggcg ctgggccaac ggcaacgggg
     1561 cgccgccgcc ttgcgcggcc gcgagccgcc gcaagcagtt ctcgacgatg atcaccgcgc
     1621 cgtcgacgat caggccgaag tcgagcgcgc ccaagctcat caggttgccg ctgacgcgcg
     1681 cctcgaccat gcccgtgatc gtcagcaaca tcgacagcgg gatcacgagc gtggtgacga
     1741 gcgcggcgcg caggttgccg agcaacgcga acagcaccgc gatcaccaat agcgcgcctt
     1801 cgaacaagtt cgtgcgcacg gtggctattg ttttgtcgac gagcgtcgtg cggtcgtaca
     1861 cggcgtcgag cctgagcccc tccggcagcg agcgattgac ctcggcgagc ttgtcggccg
     1921 cggcccgcgc cacgatgcgg ctgttctcgc ccatcagcat gaacacggtg ccgagcacga
     1981 cctcctcgcc gttcatcgtc gcggcgccgg tacgcaggtc tttgccgatc tcgacctcgg
     2041 ccacgtcgcc gatcacgacc ggagtgccct cgtgcgtcgc gacgcggatc gcgcggatgt
     2101 cgtcgagcga cgcgacctgg cccggcacgc gcacgaggta ctgattgccg aagcgctcga
     2161 tgtagccggc accgacgttg acgttgttgc gctcgagcgc cgcagcgaga tcgccgagcg
     2221 tcaagccgaa cgcgagcaga gccgtaggat gcggcgcgac gacgtattgc cgctcgtggc
     2281 cgccgatcat gttgatctcg gtgacgcccg gcacgcgcgc gagctgcggg cgcacgaccc
     2341 agtccatgac cgtgtgcaag tcgctggtgt cgtagggcgt gccgtccgct cgccgggcgc
     2401 ccggggcgac gctcaggacg aacgcgaaga tctcgcccaa gcccgtcgca atcgggccga
     2461 gctcgggctc gaggccgggc ggcaggtttg cgcgcgcctc ttgcaggcgc tcggcaacgc
     2521 gctggcgcgc gaagtagatg tccgtgccgt cctcgaacac gaccgtaacc tgcgacaggc
     2581 cgtagcgcga caccgagcgc gtgtagtcga ggcggggtag gccggccatc gcggtctcga
     2641 ccgggaacgt gatccgctgc tcggcctcga gcggcgagaa accgggcgct tcggtgttga
     2701 tctgcacctg cacgttcgtg atgtcgggca ccgcgtcgat cgtgaggcgc gtgtaattga
     2761 acgcgccgaa cgccgcgagc gccgcgacgg cgagcagcac gagccagcga tggcggaccg
     2821 accggtctac gaggtattcg agcatgcgag ttctcctcga gccgtcagtg atcgtggctc
     2881 gcgccggcct tctcgatgtc ggccttgatc aggtagctgt tgtcggtcac gtaggtcgtg
     2941 ccgggtgcga ggccgcttag cacctcgacg gaatgggcgt cgcggcggcc gagcgtcagc
     3001 atccgcactt cgtaggtgtc gccgacctgc gcgaacacga cgtcgaactc gcggaagcgc
     3061 tgcaacgccg acagcggcac ggcgacatcg accggcgccg tggcgatcgt gactcgccct
     3121 tcgacgaact gtcccggcgt ccagcggccg tcggcattgt cgagcacgac gcgcgccgtg
     3181 aggctttgcg atgcgcggtt cccgaccgga gcgagatagg cgatcgtgcc cattgccgta
     3241 agcccgttgt cggtactgat cgcgacgggt aatccctcgc gcaggcgcgg tcggtcgcgc
     3301 gagaacacgt cgagctcggc ccagaccgag gagaagtccg cgatctcgaa caggccttcc
     3361 tcgtcggtct gctcgccggg cgccgcatgg cgctgcgtga tcgtgcccgc gatcggcgcg
     3421 gtcaccgagt aagtctgcaa gctctcgttc gattcgacgg tcgcgagcgt ctcgccggcg
     3481 cgcacggcgt cgccgacgtt gcgcgtgacg gtgcgaatca ggccggcgaa gcgcgcgtga
     3541 acctcgcgga tccgcgtcgt gtccgggccg atcgcgccgt acagcagcag ctcgtcgccg
     3601 atgactccgg ggccggcggt tgccgtgccg ataccggcgt cgcgcgcgac gtctgccgcg
     3661 atcgtggtgc ggccttcata ggacgcgtat tcgaaccggt gctgctcgcc gtcgtggcgt
     3721 gcgatcaccg tgacgtcgaa cgaatgcggc tcctccacgg ttctggtgcc gcgcaggaat
     3781 tccgcttggg gtgcgaagtc gatgcggtcg accttgccgc cgagccgcgc gagctcgacg
     3841 accagcgtga cgtcgctcgg gcggagcgcc tgaccgcctt cggtcgccca ggcgtgaaac
     3901 tccggctcga caccgctttc gaagatcgcg agctcgagcg tgaactcgcc gtccgtgagc
     3961 agccgcccgc cgttcgggcc cctggccgct tcctcggcgg cgcgctcgtc ggcgtgttcc
     4021 tccgcggacg acggcgtgtt gggctcgcaa ccggcggtcg agagcaaggc aatcagaatc
     4081 cagtggctct tgttcatgtc ggtgcctcaa ttcgtgagag cgtcgccggt caggcgctcg
     4141 atctcggtgc gatacagatg ggcgttcacg gacgcgtcga tcagctggcg ctgtacgtcg
     4201 acgagctcgc gctgcgcgtc gaccca
//
LOCUS       DATCUD010000503         2703 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61477, whole genome shotgun sequence.
ACCESSION   DATCUD010000503 DATCUD010000000
VERSION     DATCUD010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2703
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61477"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1383
                     /locus_tag="VIQ99_07400"
     CDS             <1..1383
                     /locus_tag="VIQ99_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012806947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY9183009.1"
                     /translation="LHLKVGRALERERAAGVPVSPAELATHFERGHEPMTALRYYAEA
                     AQGALLQLSPADSMALSERGLTLLDQAPAGIARHAHEITLATLKGASADHLFGVASSE
                     AKSAFQRAYSRLAEVPQHPMRGLVLHGLGFLLCMRAEYDEALAFVERAEALAAATKDP
                     VLMPCVCTVQAEVHALQGRPRAARAWAERGLAAIAVPDAPVQYSLSVDPQVTLPGLLA
                     LQLLELGCVETASAHMREARDRARRLGRPISQLAALWFNALFEVRLDDRERVAALADE
                     MHALVEKFALVQGRTACRWFRGWADAKMGDPRDAYRRIRDAYEENARLGMLAGATETR
                     AYAVEALVLAGDWDAAQRELEAVFRLADTLGERVYLPQLFLLEAAIARGRGQPAVARD
                     SVRRAMKEARASEAPWLELLALLELCEHDGATTEDRRALAALVDRLPEATNTAAVRKA
                     RTLLDQVRGV"
     gene            complement(1433..2425)
                     /locus_tag="VIQ99_07405"
     CDS             complement(1433..2425)
                     /locus_tag="VIQ99_07405"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY9183010.1"
                     /translation="MALAAGLVAFASLIPPSPAAPDEPVPLAILGYRTAVARAGPSVV
                     TVYSRRTESGRLPFSPTVLVRGIASGVILERDGYIVTNRHAVHPASDLVVALTDGSLY
                     PARIVGEDPDLDIALLKVDAEGLRPIAVADIDDVAVGDIVLAIGNPFGIGQTATQGIV
                     SAIVRKGATPIENFIQTDAAINPGNSGGALVDAAGRLVGINTLILSHSGGSEGIGFAI
                     PVDLVQTVVAILKTKGRVSRAWLGLWTGPPRQGEGARVVAVEAGGPAARAGIEPGDVI
                     VRVGGSQVQRPQDVTSVVIGGEPGERRAIDLVRNGKPATVEVQLAPLPAQQATP"
     gene            complement(2511..>2703)
                     /locus_tag="VIQ99_07410"
     CDS             complement(2511..>2703)
                     /locus_tag="VIQ99_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183011.1"
                     /translation="SPAEAAAITPARASATYIDLDTKHMAPIVGAVLRPVVRETSRFG
                     PDVDVARVPFNPDRTVTFG"
BASE COUNT          408 a          928 c          936 g          431 t
ORIGIN      
        1 ctccacctca aggtcggccg cgcactggag cgggagcgcg cggcaggcgt cccggtcagc
       61 cctgccgagc tcgcgacgca tttcgagcgc ggccacgagc cgatgaccgc attgcgctat
      121 tacgccgaag cggcccaagg ggcgctgctg caattgagcc cggccgactc catggcgctc
      181 agcgagcgcg gcttgacgct cctcgatcag gcgccggcgg ggatcgcgcg ccacgcgcac
      241 gagatcacgc ttgccacgct caagggcgca tcggctgacc atctgttcgg cgtcgcatcc
      301 agcgaagcga agagcgcctt tcagcgtgcg tactcgcggc tcgccgaagt accgcaacat
      361 cccatgcgcg ggcttgttct gcacggtctc ggcttcctgc tttgcatgcg tgccgagtac
      421 gacgaggcgc tggccttcgt ggaacgcgcc gaggcgctcg cggccgccac caaagatccg
      481 gtcctcatgc cgtgcgtgtg caccgtgcaa gcagaggtcc acgcgctgca gggccggccg
      541 cgcgctgccc gcgcgtgggc cgagcgcggt ctcgctgcga tcgcggttcc ggatgcaccg
      601 gtgcagtaca gtctttcggt cgatccgcag gttacgctgc cggggttgct cgccttgcaa
      661 ctgctcgaac tcggctgcgt cgagaccgcc agcgcgcaca tgcgggaggc gcgcgaccgc
      721 gcgcgccggc tggggagacc gatatcgcag ttggccgcac tctggttcaa cgccctgttc
      781 gaggtccgac tcgacgacag ggaacgtgtc gcagcgcttg ccgacgagat gcatgcgctc
      841 gtcgaaaagt tcgcgctcgt gcagggccga accgcgtgtc gctggtttcg gggttgggcg
      901 gacgcgaaga tgggagaccc gcgcgacgcg tatcgccgca tccgggacgc ctacgaagag
      961 aatgcgcggc tcggaatgct tgcgggagcg accgagacgc gggcatatgc cgtggaggcc
     1021 ctcgtgctcg ccggcgactg ggatgccgcc caacgtgaac tcgaggcggt gttccggctc
     1081 gcagacacgc tgggagagcg cgtgtatctg ccgcagctct tcctgctgga ggctgccatc
     1141 gcacggggac gtggccagcc cgccgtcgcg cgcgactcgg ttcggcgcgc gatgaaagag
     1201 gcgcgcgcca gcgaggcgcc gtggctcgag ttgctcgccc tgctcgagct ctgcgagcac
     1261 gacggtgcaa caaccgagga tcgacgcgcg ctggctgcgc tcgtcgatcg gcttccggaa
     1321 gcgacaaaca cggccgctgt caggaaggcg cgaacgctgc tcgatcaggt caggggcgtc
     1381 tgaacggctc gcgcgtccct gcgcggattg cggccggatc gcgaggcgtg cttcacgggg
     1441 tcgcctgctg cgccggaagc ggcgccagct ggacctccac ggtcgcgggc ttgccgttcc
     1501 gaacgagatc gatcgccctc cgctcgcccg gctcgccgcc gatcacgacg ctggtgacgt
     1561 cctgcggacg ctgcacctgg ctcccgccga cgcgcacgat gacgtcgccg ggctcgatgc
     1621 cggcccgagc cgcgggccct cctgcctcca ccgcgacgac ccgggcgcct tcgccttggc
     1681 gtggcggacc ggtccacaaa ccgagccacg cgcggctcac acgtcccttc gtcttcagga
     1741 tcgcgacgac ggtctgcacg aggtccaccg gtatggcgaa gccgatcccc tcggatccgc
     1801 cgctgtgcga gaggatcaag gtgttgatcc cgacgaggcg gcccgcggcg tcgaccagcg
     1861 cgccgcccga gttgccgggg ttgatcgccg cgtcggtttg aatgaagttc tcgatcggcg
     1921 tcgccccctt gcgcacgatc gcgctgacga tgccttgcgt cgccgtctgg ccgatgccga
     1981 atggattacc gatcgcgagc acgatgtcgc cgaccgccac gtcgtcgatg tcggcgaccg
     2041 cgatcggccg cagtccctcc gcgtcgacct tgagcagcgc gatgtccaga tccggatcct
     2101 cgccgacgat gcgggccggg tacagactgc cgtccgtcag cgcgaccacg aggtcggagg
     2161 caggatggac ggcgtgacgg ttcgtcacga tgtagccatc gcgttcgagg atgacccccg
     2221 aggcgatgcc cctcaccagg accgtcgggc tgaagggcag ccttccggac tccgtccgtc
     2281 gtgagtacac cgtgaccacc gacgggccgg cgcgggcgac ggcggtgcgg tagccgagga
     2341 tagccaacgg gaccggctcg tcgggcgccg ctgggcttgg cggaatcagc gacgcgaacg
     2401 caaccaatcc ggcggcgagc gccacgagca catgtattga ccgtttcatc gatcgatctc
     2461 ttccattgct gcgttaccag tcagtttgag cgcccgagcg cgtccggtcg tcagccaaac
     2521 gtcaccgttc tgtcgggatt gaacggcacg cgggccacgt cgacatccgg accgaatcgg
     2581 gacgtttccc taacgactgg ccggagtacc gcccctacga tgggcgccat gtgcttcgtg
     2641 tccaaatcga tatacgtggc gctcgctctg gccggtgtga tcgcggcggc ctcggcgggc
     2701 gag
//
LOCUS       DATCUD010000504         2100 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19258, whole genome shotgun sequence.
ACCESSION   DATCUD010000504 DATCUD010000000
VERSION     DATCUD010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19258"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(165..1379)
                     /locus_tag="VIQ99_07415"
     CDS             complement(165..1379)
                     /locus_tag="VIQ99_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002812627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY9183012.1"
                     /translation="MATATATQVPFTWEGKDRTGKTVKGKVVSTSEAAVRSELRRQGV
                     VPTRVRKQSMLFRKQGKVTPADIAIFSRQLATMMTAGIPLVQSFDIVGAGHENPAMQK
                     LILAIKGDVEGGTALADALAKHPLHFDDLFVNLVAAGEQAGALETLLDKIATYKEKTE
                     AIKKKIKKALFYPAAVVVVAIVVTTILLIYVIPEFESLFQGFGADLPAFTRFVIDISK
                     FVQSTGWVLLLATVGGIMGFLYAKKRNRGVQHFVDRAMLKVPIIGSILHKSAIARYAR
                     TLSTTFAAGVPLVEALGSVAGATGNIVYESAVLKMRDEVATGQRLQRAMENTDLFPNM
                     VNQMIAVGEESGSLDSMSAKVADFYEEEVDNAVDSMSSLLEPLIMAILGVLVGGLVIA
                     MYLPIFKMGAVV"
     gene            complement(1440..>2100)
                     /locus_tag="VIQ99_07420"
     CDS             complement(1440..>2100)
                     /locus_tag="VIQ99_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018862617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY9183013.1"
                     /translation="NISTAEDPAEINMPGVNQVNVNPKVGLTFAAALRAFLRQDPDII
                     MVGEIRDLETAEIAIKAAQTGHLVLSTLHTNDAPKTLTRLVDMGVKPYAIASSVSLII
                     AQRLSRRLCSNCKEPVDIPAEALLKEGFTQADIASGMTIFHAKGCSQCTNGYKGRVGI
                     YQVMPCTETIGRIIMEGGNSMQIAAQAKAEGVADLRQSGLKKVKDGLTSLEEVNRVTV
                     D"
BASE COUNT          359 a          680 c          659 g          402 t
ORIGIN      
        1 tctcgagctc tttgcattgc gcgcgccaag cgcgctccat catgagcggg acgcggtagg
       61 cgacgacgtt caggaagctg ccgaccgcga gcccgaccaa gcccgccacg acaaacagca
      121 tgaagggcca gacctcgaag atctccacgc gcggtgcgcg tgccttagac gaccgcgccc
      181 atcttgaaga tcggcaagta catcgcgatg acgagaccgc cgacgaggac gcccaagatc
      241 gccatgatca gcggctcgag caagctcgac atgctgtcga ccgcgttgtc gacctcttcc
      301 tcgtagaaat cggcgacctt cgccgacatc gagtcgagcg agcccgattc ctcgccgacc
      361 gcgatcatct ggttgaccat gttcggaaac aggtcggtgt tctccatcgc gcgctgcaac
      421 cgttggcccg tcgcgacctc gtcgcgcatc ttcaggacgg cggactcgta cacgatgttg
      481 ccggtcgcgc cggccacgga gccgagcgcc tcgacgagcg gcacgccggc cgcgaacgtc
      541 gtcgacagcg tgcgcgcgta gcgcgcgatc gcggacttgt gcaggatcga gccgatgatc
      601 gggactttca gcatcgcgcg atcgacgaaa tgctggacgc cgcgattgcg cttcttcgca
      661 tacaagaagc ccatgatgcc gccgacggtg gcgagcaaca gcacccagcc cgtcgactgc
      721 acgaacttcg agatgtcgat cacgaagcgt gtgaacgccg gcaggtccgc gccgaaaccc
      781 tggaacaggg actcgaactc cgggatcaca tagatcaaca gaatggtcgt gacgacgatg
      841 gcgacgacga cgacggctgc gggatagaac agcgccttct tgatcttctt cttgatggct
      901 tccgtttttt ccttgtacgt ggcgatcttg tcgagcagcg tctcgagcgc gccggcttgc
      961 tcgccggccg cgaccaggtt cacgaacagg tcgtcgaagt gcagcgggtg cttcgcgagc
     1021 gcgtccgcga gcgccgtgcc gccttcgaca tcgcccttga tggccaggat cagcttctgc
     1081 atggccgggt tctcgtgccc ggcgccgacg atgtcgaacg actgcacgag cgggatgccg
     1141 gcggtcatca tcgtggcgag ctggcgggag aagatcgcaa tgtcggccgg tgtgaccttg
     1201 ccctgcttcc ggaacagcat gctctgcttg cgcacgcgcg tggggacaac gccctgccgg
     1261 cgcagctcgg agcggacggc ggcctcgctc gtcgagacga ccttgccctt gaccgtcttt
     1321 ccagttcggt ccttgccctc ccacgtaaac gggacttggg tcgcggttgc ggttgccata
     1381 cgtcagcgtc tccaacagag aacggtctca agcggcccat ccggtggccg cttgggttgc
     1441 taatccactg taacccgatt gacctcttcc aaactggtaa ggccatcctt gactttcttg
     1501 agcccggatt gtcgcaggtc ggccacaccc tcggccttgg cctgggctgc gatctgcatc
     1561 gaattgccgc cttccatgat gatgcgcccg atcgtctcgg tgcacggcat gacctggtag
     1621 atgccgacgc ggcccttgta gccgttcgtg cactggctgc agcctttcgc gtggaagatc
     1681 gtcatgccgg acgcgatgtc ggcctgcgtg aagccttcct tcagcagcgc ctcggccgga
     1741 atgtcgacgg gctccttgca attgctgcag agccggcgcg agagccgttg cgcgatgatc
     1801 aagctcaccg agctcgcgat cgcgtatggc ttcacgccca tgtcgacgag ccgtgtcagg
     1861 gttttcggtg cgtcgttcgt gtgcagcgtc gacaacacca agtggccggt ctgcgcggcc
     1921 ttgatcgcga tctcggccgt ctcgaggtcg cggatctcgc cgaccatgat gatgtcgggg
     1981 tcctgacgca ggaacgcgcg cagcgccgcc gcgaacgtga gcccgacttt cgggttcacg
     2041 ttgacctggt tcacgcccgg catgttgatt tccgccggat cctcggccgt cgagatgttg
//
LOCUS       DATCUD010000505         2037 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97501, whole genome shotgun sequence.
ACCESSION   DATCUD010000505 DATCUD010000000
VERSION     DATCUD010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2037)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2037)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2037
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97501"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VIQ99_07425"
     CDS             <1..495
                     /locus_tag="VIQ99_07425"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9183014.1"
                     /translation="LVARGVRPSLSIDVVSSVPGDMFTQMRTALVQERILAFTDSPDT
                     AFAPTLTHRDVLEFATIDGAKACALDHKIGTLKPGKQADIILVRTDQVNVAPVIDPVA
                     TVVICADNSNIDTVIVGGRIVKHNGQLIRLDLPRLLDRLSNARDYLLSHAGVIPKWIL
                     SRRD"
     gene            complement(506..>2037)
                     /locus_tag="VIQ99_07430"
     CDS             complement(506..>2037)
                     /locus_tag="VIQ99_07430"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183015.1"
                     /translation="RGHHTIGLDTRQNHQFLDHDWLDGLTFDWYASDATAETDIPSEI
                     KFSAEDTVDPASGELLQTAIRRSNSAADYRYTNLEDEVRSSGWDLMKAYTFDRVDVEF
                     SGGQDVSDKARSYAQTQFGLGTTELAASSILLGTPGQVFTDANILNPTNGFNLTVGGI
                     GTESYLAAQTLDGAYLKADALFNDKWRLAGGVRWEDFHQVALPIDLLEYSVEQGQCAL
                     VPCDDAALEQILFVEDDVYPALAATRIFQDVWAEDFQIRVGLSQTVARPDLREVSASS
                     YIDPLTETRIRGNPDLQTSPIDNIDLRAEWFFANGDNFTASLFYKDIERPIETVQGAG
                     TDDNVSLTFINAESANISGLEIEWMKDLSTFGWDFLEPFFFSGNVTLSDSELTVGDIA
                     FNLTNDVRPMTGHSEHVANLQLGFDSDNGAHTFTLAYNTFGERLFFAGRDGAPDAYEQ
                     PFDSLDFVYSFFPTERLSLKFRVQNLLDESLEIQQNDTTVIEQTIGTTAKIDVKWTLG
                     N"
BASE COUNT          346 a          629 c          677 g          385 t
ORIGIN      
        1 ctcgtcgcgc gcggtgtgcg accgtcgctg tcgatcgacg tggtctcgag cgtgcccggc
       61 gacatgttca cgcagatgcg cacggcgctc gtgcaggagc gcattctcgc gttcacggat
      121 tcacccgaca ctgcgttcgc gccgacgctg acgcaccgcg acgtgctcga gttcgcgacg
      181 atcgacggcg cgaaggcctg cgcgctcgat cacaagatcg gcacgctcaa gcccggcaag
      241 caggccgaca tcatcctcgt gcgcacggat caggtgaacg tcgcgcccgt gatcgacccg
      301 gtcgcgacgg tcgtgatctg cgccgacaac tcgaacatcg acaccgtgat cgtcggcggc
      361 cgcatcgtga agcacaacgg ccagctgatc cggctcgacc tgccgcggct gctcgatcgg
      421 ctgtcgaatg cgcgcgacta tctgctgtcg cacgcgggcg tgatcccgaa gtggatcctg
      481 tcgcggcggg attgagcgcc gccggtcagt taccgagcgt ccacttcacg tcgatcttgg
      541 ccgtggtgcc gatcgtctgc tcgatcacgg tcgtatcgtt ctgctggatc tcgagcgatt
      601 cgtcgagcag gttttgaaca cggaacttca gactcaagcg ctcggtcggg aagaacgagt
      661 agacgaagtc cagcgagtcg aagggctgct cgtacgcatc cggcgcgccg tcacggcccg
      721 cgaagaacag ccgctcgccg aacgtgttgt aggcgagcgt gaacgtgtga gcgccgttgt
      781 cggagtcgaa cccgagctgg aggttcgcca cgtgctcgga atgcccggtc atcggccgca
      841 cgtcgttcgt gaggttgaac gcgatgtcgc cgaccgtgag ctcggaatcg ctgagcgtga
      901 cgttacccga gaagaagaac ggctcgagga agtcccagcc gaacgtcgag agatccttca
      961 tccactcgat ctcgaggccc gagatgttcg ccgactcggc gttgatgaac gtgagcgaga
     1021 cgttgtcgtc ggtgccggcg ccttgcacgg tctcgatcgg tctctcgatg tccttgtaga
     1081 acaacgatgc cgtgaagttg tcgccgttcg cgaagaacca ctcggcgcgg agatcgatat
     1141 tgtcgatcgg tgacgtttgg aggtccgggt tgccgcgaat cctggtttcg gtgagcgggt
     1201 cgatgtagct cgaagccgac acctcgcgca gatccggacg cgcgaccgtc tggctcaggc
     1261 cgacgcgaat ctggaaatcc tcggcccaga cgtcttggaa gatccgagtg gctgccaacg
     1321 cgggatacac gtcgtcctcg acgaacagga tttgctcgag cgcagcgtca tcgcacggca
     1381 cgagcgcgca ttggccttgc tcgacgctgt attcgagcaa gtcgatcggc agcgcgactt
     1441 ggtggaagtc ctcccagcga acgccgccgg ccaggcgcca cttgtcgttg aacagcgcgt
     1501 cggccttgag gtaggcgccg tccaacgtct gcgcggcgag atagctctcg gtcccgatgc
     1561 ccccgacggt gaggttgaat ccgttagtag ggttcaggat gttggcgtcc gtgaacacct
     1621 ggcccggcgt tccgagcagg atcgatgacg ccgcgagctc cgtcgtgccg aggccgaact
     1681 gggtctgcgc gtaactgcgg gccttgtccg agacgtcctg gccgccgctg aattcgacgt
     1741 cgacccggtc gaacgtatag gccttcatca agtcccagcc gctgctccga acctcgtcct
     1801 cgaggttcgt gtagcgatag tccgcggcgg agttcgagcg gcggatcgcg gtctgtagca
     1861 gctcgccgct cgcggggtcg acggtatcct cggccgagaa cttgatctcg ctcgggatgt
     1921 cggtttcggc cgtcgcgtcc gaggcgtacc aatcgaacgt cagcccgtcg agccaatcgt
     1981 ggtcgaggaa ctggtggttc tggcgcgtgt cgaggccgat cgtgtggtgg ccgcgaa
//
LOCUS       DATCUD010000506         1769 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_11957, whole genome shotgun sequence.
ACCESSION   DATCUD010000506 DATCUD010000000
VERSION     DATCUD010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_11957"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1426)
                     /locus_tag="VIQ99_07435"
     CDS             complement(<1..1426)
                     /locus_tag="VIQ99_07435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183016.1"
                     /translation="MCAFVAATLVTTVHAAEWWAPGDGRPLPVEATYENTYGRLGIVN
                     TAGTVETRDHPFFTALGSNGRGCVTCHQPADGMSLSVATIRARWDETRGTDPLFAAVD
                     GRNCPNLAGGDPAAHSLILTRGLIRVALPWPPQSAAGEPLPTEFTLEVVRDPTGCNSD
                     PVYGLRSAQPTVSVYRRPRPVANTKYLTHHNFGVGPFIAKSGLPAFRDPDTGLPTSMN
                     MMADARATTLKLQAQDAARNHLELTRALAPAELERIVAFEQQIYSAQAYDAGAGDLTL
                     PGGPPGFGPENLAAAPAGVLGNNTTRFVFPIGTTWLERSGAASGTGADAAHEARAAIA
                     RGHDVFMFRTFFIRDSMHLNSVGLGNPVKRTCSTCHGMHMTGMDVANGWMDIGTTNLP
                     WARETPRNPWTTETPQLPLFKITCNADIAPHPFLGRVIYTQDPGRALISGKCNDVGAI
                     VMQQFRGLAARAPYFSNGSAATLRE"
     gene            complement(1584..>1769)
                     /locus_tag="VIQ99_07440"
     CDS             complement(1584..>1769)
                     /locus_tag="VIQ99_07440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183017.1"
                     /translation="VGGLIALAVSDRKLASRFDEVEQSLAALFPDQLADELAQAVHVL
                     AQRPVLLREKDVGADGA"
BASE COUNT          264 a          586 c          631 g          288 t
ORIGIN      
        1 gctcgcgcag cgtggcggcc gagccgttcg agaaatacgg tgcgcgggcc gcgaggccgc
       61 ggaactgctg catcacgatc gcgccgacgt cattgcactt gccggagatc agtgcgcggc
      121 ccgggtcctg cgtgtagatc acgcggccga ggaatgggtg cggcgcgata tcggcgttgc
      181 aggtgatctt gaacagcggc agctgcggcg tctcggtcgt ccacgggttg cgcggcgtct
      241 cgcgtgccca cggcagattc gtcgtgccga tgtccatcca gccgttcgcg acgtccatgc
      301 ccgtcatgtg catgccgtgg cacgtcgagc acgtgcgctt gacgggattg ccgaggccga
      361 cgctgttcaa gtgcatcgag tcgcggataa agaaggtgcg gaacatgaat acgtcatggc
      421 cgcgcgcaat cgctgcgcga gcctcgtgcg cggcgtcggc gccggttccg ctcgcggcgc
      481 cgctgcgctc gagccaggtc gtgccgatcg ggaacacgaa gcgcgtcgta ttgttgccga
      541 gcacgccggc cggggcggcg gcgagattct cgggaccgaa gcccggcggg ccgccgggga
      601 gtgtcaaatc tccggcgccc gcatcgtagg cctgcgcgga atagatctgc tgctcgaacg
      661 cgacgatccg ctcgagctcc gccggcgcga gcgcgcgcgt gagctcgagg tgattgcgcg
      721 ccgcatcctg agcttgcagc ttcaacgtgg tcgcgcgcgc gtcggccatc atgttcatgc
      781 tcgtcggcag gccggtgtcg gggtcgcgga acgccggcag gccgctcttc gcgatgaacg
      841 gaccgacgcc gaaattgtgg tgcgtcagat atttcgtgtt cgcgaccggc cgcggccgcc
      901 gatacacgga cacggtcggc tgcgccgagc ggaggccata gaccggatcc gagttgcagc
      961 ccgtggggtc gcggacgacc tcgagcgtga actcggtcgg caacggctcc cccgcggcgc
     1021 tctgcggcgg ccagggcaga gcgacgcgga tcagtccgcg ggtcaggatc agcgagtgcg
     1081 cggccgggtc gcccccggcc aggttcgggc aattgcggcc gtccacggcc gcgaacaacg
     1141 gatccgtgcc gcgggtttcg tcccagcgcg cgcggatcgt cgcgaccgac agcgacattc
     1201 cgtcggcagg ctggtgacac gtcacgcagc cgcggccatt gctgccgagc gccgtgaaga
     1261 acggatgatc ccgcgtctcg actgtcccgg ccgtgttcac gatgccgagc ctgccgtacg
     1321 tgttctcgta ggtcgcttcg accggcaacg gccgaccgtc gccgggcgcc caccattcgg
     1381 cggcatggac cgtggtgacg agcgttgccg caacgaatgc gcacaagccg gcacgacgct
     1441 gccgaggact ccccactcga ttctccggag gcttctgaag ttcgtgagac tatgcagcgg
     1501 cgtgctgggc gctgacaagc ctcgcgcgcc cggccgccgc gcgtttttta gggctatgat
     1561 ttgggtcgcc aatgtcctcc acctcacgca ccgtccgcgc cgacatcttt ttcgcggaga
     1621 aggaccgggc gctgcgcgag gacgtgcacc gcctgggcga gctcgtcggc gagctggtcc
     1681 gggaacaagg cggcgaggct ctgttcgacc tcgtcgaaac ggctcgcaag cttgcgatcg
     1741 ctcaccgcga gggcgatcag gccgcctac
//
LOCUS       DATCUD010000507         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33499, whole genome shotgun sequence.
ACCESSION   DATCUD010000507 DATCUD010000000
VERSION     DATCUD010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33499"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2013)
                     /locus_tag="VIQ99_07445"
     CDS             complement(<1..>2013)
                     /locus_tag="VIQ99_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002730090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl hydrolase family 65 protein"
                     /protein_id="HEY9183018.1"
                     /translation="LPIRHETAPYVARHGQGYSRFEHTAHGIALELLQYVPLEDPVKI
                     SRLTIRNLSPRTRRLSLTAYVEWVLGPSRGASALTVVTEMDPETGAMFARNPWNATFG
                     PSVAFADLGGRHTAWTGDRREFLGRNGTLDNPAALAADAPLSQRVGAGLDPCGALQAA
                     VELKPGGTVEVVFLLGQAATAADAQSLIARYRAADLDAVLREVVAHWDDVLGTVQVKT
                     PDRSMDIMLNRWVLYQTLVCRMWARSAFYQASGAYGFRDQLQDGMALALSRPAMTREH
                     LLRAAARQFVEGDVQHWWLPPSGQGVRTRISDDRIWLAYAAAHYVETTGDVAVLDEPV
                     PFLEGQPLGSGEHDAYFRPMLAEESASLFEHCARGVDQSLGVGEHGLPLIGTGDWNDG
                     MNRVGEKGKGESVWLGWFLHATLAAFAPLAKARGEEARVATWLSHAARLRTSLERDGW
                     DGDWYRRGYFDDGTPLGSSTSDECRIDSIAQSWSVISGAAEPARAARAMAAVDEHLVR
                     SSDGLALLFTPPFDRTPLDPGYIRGYPAGIRENGGQYTHAAVWSAIAFAALGDGDKSA
                     ELFSLLNPINRTSTRADVQRYKVEPYVVAADVYSVAPHVGRGGWTWYTGSAGWLYRAG
                     LEAILGFRVQDAVLSLAPCIPKVWPRFEIVFKYRSARYEIAVENPD"
BASE COUNT          325 a          692 c          703 g          293 t
ORIGIN      
        1 cgtctggatt ctcgaccgcg atctcgtagc gcgcagagcg gtacttgaag acaatctcga
       61 agcgtggcca caccttcgga atgcaaggcg ccagggacag gaccgcgtcc tgcacgcgaa
      121 aaccgaggat cgcctcgagc ccggcgcggt acagccatcc ggctgagccc gtataccagg
      181 tccagccccc gcgcccgaca tgcggcgcga ccgagtagac atcggcggcg acgacgtagg
      241 gctccacctt gtagcgctgc acgtccgccc gcgtgctcgt gcggttgatc ggattcagga
      301 gcgagaacag ctcggcggac ttgtccccgt cgcccagggc ggcgaaggcg atcgcggacc
      361 agaccgcagc gtgggtgtac tggccgccgt tttcccggat gccggccggg tagccccgga
      421 tgtagccagg atcgagcggt gtgcgatcga agggcggtgt gaacagcagg gcgagaccgt
      481 cactgctacg gacgaggtgc tcgtccacgg cggccatggc gcgcgcggcg cgcgccggct
      541 ctgccgcccc ggagatcacg ctccaggatt gcgcgatcga gtcgatccgg cattcgtcgc
      601 tcgtggacga gccgagcggc gtgccgtcgt cgaagtagcc tcgccggtac caatcaccgt
      661 cccagccgtc ccgctcgagc gaggtccgga gtcgggcagc gtgcgaaagc cacgtcgcga
      721 cgcgcgcctc ctcgccgcgc gctttcgcga gcggtgcgaa cgccgcgagc gttgcgtgca
      781 ggaaccagcc gagccagacg ctctccccct tgcccttctc gccgacccgg ttcatgccgt
      841 cgttccagtc gcccgtgccg atcaacggca agccgtgttc gccgacgccg agactctggt
      901 cgaccccgcg cgcgcagtgc tcgaacagcg acgcactctc ttccgcgagc atgggccgga
      961 agtaggcgtc gtgctcgccg gaaccgagcg gctggccttc gaggaacgga acgggctcgt
     1021 ccagcaccgc gacgtcgccg gtcgtctcga catagtgcgc ggcggcgtag gcgagccaga
     1081 tccgatcgtc ggaaatgcgt gtccgcacgc cctggccgga cggcggcagc caccagtgct
     1141 ggacatcgcc ttcgacgaac tgccgggccg cggcgcgcag gagatgctcg cgcgtcattg
     1201 ccggtcgtga cagggcgagc gccatgccgt cctggagctg gtcgcggaag ccgtacgcgc
     1261 cactcgcctg ataaaacgca gatcgggccc acatgcggca gacgagcgtc tggtagagga
     1321 cccagcgatt cagcatgatg tccatcgacc ggtccggtgt cttcacctga accgtgccga
     1381 gcacatcgtc ccaatgcgcg acgacctcgc gcagcacggc atcgaggtcg gcggcgcggt
     1441 aacgggcgat cagggactgc gcatcggccg ccgtcgccgc ctggccgagg aggaagacga
     1501 cctccaccgt gccgcccggc ttgagctcga ccgcagcctg cagggcgccg cacggatcga
     1561 ggcccgcacc cacccgctgc gagaggggcg cgtccgcggc gagcgcggct gggttgtcga
     1621 gcgtgccgtt ccgtcccagg aattcccgac ggtcgccggt ccaggcagtg tgacggccgc
     1681 ccagatccgc aaacgcgacg ctggggccga acgtcgcgtt ccaggggtta cgcgcgaaca
     1741 ttgcgcccgt ctccggatcc atttccgtca cgaccgtgag tgcggacgcg ccgcgggacg
     1801 ggccgagcac ccactcgaca taggccgtga gcgagaggcg ccgggttcgc ggcgacaggt
     1861 tccggatcgt cagacgcgag atcttgaccg gatcctcgag cggcacatac tggaggagtt
     1921 cgagcgcgat gccgtgtgcg gtgtgctcga accggctgta gccctggccg tgcctggcga
     1981 catagggcgc ggtctcgtga cgtatcggca ggg
//
LOCUS       DATCUD010000508         1525 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19311, whole genome shotgun sequence.
ACCESSION   DATCUD010000508 DATCUD010000000
VERSION     DATCUD010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19311"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(59..>1525)
                     /locus_tag="VIQ99_07450"
     CDS             complement(59..>1525)
                     /locus_tag="VIQ99_07450"
                     /inference="COORDINATES: protein motif:HMM:NF025930.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HEY9183019.1"
                     /translation="FPTYGVILYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
                     EQRAVFLKGATERGVEPARANHIFDQMETFAGYGFNKSHAAAYALLAYQTAWLKTHYP
                     EAYMAAVFTADLDSTDRLVVLKDDLKRMGIVLEPPDVNRSVFAFTAVGPKRISYGLGA
                     LKGVGPGAVEAIVTEREAHGPYTSLVDLCRRVDLTKINRRVLEALVRSGALDSLGLNR
                     ATLMQGIPQALSAAERSVHAQAAGQTTLFGGDERGQSLDIVLTPVREWSKRERLEGER
                     ESLGLYLTGHPFDDFAEHCKHFTNGAIAKVLGGLPSSALPYHVRKEAILAGVVVDVRR
                     RGNRVSVVLDDDTERIEVTMFDEVFAQAKHVIAKHAVLIVEGQLKYDDFINGWRVTAK
                     RVRSADDAIEEYARRLTVLWPREGAGPDLVRELQRVLKPFARGRCEVCIKYQTPGAEA
                     ELTLGEAWSVRVTRELRDQLTRLLGDDSYLIHYPKHFV"
BASE COUNT          239 a          548 c          475 g          263 t
ORIGIN      
        1 caccgcgcct ccccgccgct atctgacgaa gtccgagcca cacgcgtcga cgccgcgctc
       61 agacgaagtg cttcgggtag tggatcaggt agctgtcgtc gccgagcaag cgcgtgagct
      121 ggtcgcgcag ctcgcgcgtc acgcgcaccg accacgcttc gccgagcgtg agctccgcct
      181 cggcgcccgg ggtttggtac ttgatgcaga cctcgcagcg accgcgcgcg aacggcttca
      241 acacgcgctg cagctcgcgc acgagatcgg ggccggcgcc ctcgcgcggc cacaacacgg
      301 tgagccgccg cgcgtactcc tcgatcgcgt cgtcggcgga gcgcacacgc ttcgccgtca
      361 ctcgccagcc gttgatgaag tcgtcgtact tgagctggcc ttcgacgatc aacaccgcgt
      421 gcttcgcgat cacgtgcttc gcttgtgcga acacttcgtc gaacatcgtg acctcgatgc
      481 gctcggtgtc gtcgtcgagc acgaccgaga cccgattgcc gcgacgccgc acgtcgacga
      541 cgactccggc gagaatcgcc tccttgcgca catggtaagg caacgccgag ctcggcaagc
      601 cgccgagcac ctttgcgatc gcgccgttcg tgaaatgctt gcagtgctcc gcgaagtcgt
      661 cgaacgggtg tccggtcaag tacaacccga ggctctcgcg ctcgccctcg aggcgctcgc
      721 gcttgctcca ttcgcgcacc ggagtcaaca cgatgtcgag gctttgacct cgttcgtcgc
      781 cgccgaacag cgtcgtctgc ccggccgcct gcgcatggac cgaccgctcc gccgcgctca
      841 acgcctgcgg aatgccctgc atcagcgtcg cacgattcag gcccaacgaa tccagtgctc
      901 ccgaccgcac gagcgcctcg agcacgcgtc ggttgatctt cgtgaggtcg actctccggc
      961 acaggtcgac gaggctcgtg tacgggccgt gcgcctcgcg ctccgtgacg atcgcttcga
     1021 ccgcaccggg cccgacccct ttgagcgcgc cgagcccgta gctgatccgc ttcggcccga
     1081 ccgccgtgaa cgcgaacacg gaacgattca cgtcgggcgg ctcgagcacg atccccatcc
     1141 gcttcaagtc gtccttcagc acgacgaggc gatcggtgct gtccaggtcg gccgtgaaca
     1201 cggcggccat gtaggcctcg ggatagtgcg tcttgagcca cgccgtctga tacgcgagca
     1261 atgcgtatgc ggccgcatgc gacttgttga agccgtagcc cgcgaacgtc tccatttggt
     1321 cgaagatgtg gttcgcgcga gccggctcga cgcctcgctc ggtcgcgccc ttcaggaaca
     1381 cggcgcgctg ctcggccatc tcctcgggct tcttcttgcc catcgcgcgg cgcagcaggt
     1441 cggcgccgcc gagcgtgtac ccggcgagca cctgcgcgat ctgcatgacc tgctcctggt
     1501 agaggatcac gccgtaggtc gggaa
//
LOCUS       DATCUD010000509         1869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19320, whole genome shotgun sequence.
ACCESSION   DATCUD010000509 DATCUD010000000
VERSION     DATCUD010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19320"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VIQ99_07455"
     CDS             <1..903
                     /locus_tag="VIQ99_07455"
                     /inference="COORDINATES: protein motif:HMM:NF021367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2066 domain-containing protein"
                     /protein_id="HEY9183020.1"
                     /translation="SRLLIRVTGNRSAPLDPVLQPLVASPRAYLSSYGLDRQSRALVG
                     FSRSQVERTLNGLGVPVWGPERPLTLLWVAIDDGAGGRALLGANVAAEPGVDVTPALT
                     ALITAVRAEIDLAADERGLPIAWPLLDLQDLSTVTFEDVWGRFDDRILAASTRYRADA
                     VLIGRVRPGTFGNEVEWLFVNGTERQGLPGAAVRDGLDAAADRYAAELSTVGGPSTNT
                     ITVHNVGTSADYGKVMSYLEQQSVLQRVDVESFGNGTLSLRVAARGDARVLERVLGLG
                     GVLRPTSAGEGLLVFELVGSGALQ"
     gene            900..1457
                     /locus_tag="VIQ99_07460"
     CDS             900..1457
                     /locus_tag="VIQ99_07460"
                     /inference="COORDINATES: protein motif:HMM:NF013250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY9183021.1"
                     /translation="MSLRFLPNAICVGRILLVVPLVTWIVEQRYAAALVLLVIAGFSD
                     GLDGFLAKTFDWRTRLGGLLDPLADKLLLVSVFVALTYVGLLPLGLTAVVVARDAIIV
                     LGAVSYQLLIAPVQGEPAAVSKLNTACQLSLVFFTLTSAAFGWPPRVSLVVLGAAVVF
                     TSVVSGLTYILRWSARAWHVAHGAS"
     gene            1470..>1869
                     /locus_tag="VIQ99_07465"
     CDS             1470..>1869
                     /locus_tag="VIQ99_07465"
                     /inference="COORDINATES: protein motif:HMM:NF012529.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HEY9183022.1"
                     /translation="MAQLPLALTLADHASFATFVRGSNGAAVEHVHALAQGRAETMWL
                     WGGAGSGKSHLLQAACRAATAAQRRAMYVALPAAAPGILTDLESVDLLAIDDVHAVAG
                     DVEWERPLFAILNAFLSRDGALLLAATGPAA"
BASE COUNT          253 a          575 c          675 g          366 t
ORIGIN      
        1 tcgcgactgt tgattcgcgt gaccggcaat cgcagcgcgc cgctcgatcc ggtcttgcag
       61 cctctggtcg cgagccccag ggcgtacctg agctcgtacg gcctcgatcg gcagagtcgc
      121 gcgctcgtcg gcttcagccg cagccaggtg gaacgcacgt tgaacggtct cggcgtgccc
      181 gtgtgggggc cggagcgccc gctgacactg ctgtgggtgg ccatcgacga tggtgccggc
      241 ggccgcgcgt tgctcggggc gaacgttgcg gccgagcccg gcgttgacgt gacgccggca
      301 ttgaccgcgc tgatcacggc cgtgcgtgcc gagatcgatc tcgcagccga cgagcgaggg
      361 ctgccgatcg catggccgct gctcgatctc caagacttga gtacggtcac gttcgaggac
      421 gtgtggggcc gtttcgacga tcggatcctc gccgcctcga cgcgttaccg cgccgacgcc
      481 gtgttgatcg gtcgcgtgcg tccgggcacg ttcggcaatg aagtcgagtg gctgttcgtg
      541 aacggtacgg agcgacaggg tctgcccggc gctgccgttc gtgatggtct ggacgcggcc
      601 gcggatcgtt acgcggcgga gctcagcacc gtgggtgggc cgagcacgaa tacgatcacc
      661 gtccacaacg ttgggacctc ggccgactac ggcaaggtca tgagctacct cgagcagcaa
      721 agcgtgctcc agcgcgtcga cgtcgagtcg ttcggcaacg gtactttgag cctgcgcgtg
      781 gccgcgcgcg gcgatgcccg cgtgctcgag cgcgtgctcg gtctcggcgg cgtcttgaga
      841 ccgacctcag cgggggaagg gttgttggtg ttcgagctcg tagggagtgg tgcactgcag
      901 tgagcttgag attcctgccg aatgcgatct gtgtcgggcg gatattgctc gtggtaccgc
      961 tcgtgacgtg gatcgtcgag cagcggtatg ccgctgcgct cgtgctactg gtgatcgcgg
     1021 gtttctcgga cggcctcgac gggttcttgg ccaagacctt cgattggcgg acacgactcg
     1081 gcggactgct cgatcccctg gccgacaagt tgctgctcgt cagcgtcttc gttgcgctca
     1141 cgtacgtcgg gctgttgccg ctcggcctca cggccgtcgt cgtggcgcga gatgcgatca
     1201 tcgtcctcgg agccgtctcc tatcaactgc tgatcgctcc ggtgcaaggt gagcctgcgg
     1261 ccgtgagcaa gttgaacacc gcgtgtcagc tgagcctggt gttctttacg ctaacgagcg
     1321 ccgcgttcgg ctggccgccg cgcgtttcgc tcgtcgtgct cggagcagcc gtcgtgttca
     1381 cgagcgtcgt cagcgggctc acgtacatcc tgcgctggag cgcgcgcgcg tggcacgttg
     1441 cgcacggcgc gagctaggcg ggaggcgatt tggcgcaact gccgctcgcg ttgacgctcg
     1501 ccgatcatgc gagcttcgcg acgttcgttc gcggcagcaa cggcgccgca gtggagcacg
     1561 tccatgcact ggcgcaaggg cgcgcggaaa cgatgtggtt gtggggtggc gcggggtccg
     1621 gcaagagtca tctgctgcag gccgcgtgcc gcgccgcgac tgccgcgcag aggcgcgcga
     1681 tgtatgtggc cctgccggcg gcggcaccgg ggattctcac ggatctcgag agtgtcgact
     1741 tgctcgcgat cgacgatgtg cacgccgttg ccggcgatgt cgaatgggag cggccgttgt
     1801 tcgcgatctt gaatgcgttt ctatcgcgcg atggtgcgtt gctgttggct gctaccggcc
     1861 cggccgcaa
//
LOCUS       DATCUD010000510         2122 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_54837, whole genome shotgun sequence.
ACCESSION   DATCUD010000510 DATCUD010000000
VERSION     DATCUD010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54837"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1029)
                     /locus_tag="VIQ99_07470"
     CDS             complement(<1..1029)
                     /locus_tag="VIQ99_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009850401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9183023.1"
                     /translation="MDAPKNNNTILGISAYYHDSAAALLVDGEVVAAAQEERFSRKKH
                     DARFPAHAIRYCLQEAGVALTDVDRVVFYDKPLVKFERLLETYLSYAPNGIRSFIAAM
                     PVWLKEKLYLKTTLRKELAELGACKTKDLPALLFAEHHQSHAASAFYFSPFERAAVLC
                     LDGVGEWATTSAWRGSGAKLEPLWEIDFPHSLGLLYSAFTYFTGFKVNSGEYKLMGLA
                     PYGQPKYVDLILKNLLDLKDDGTFRLDMQYFNYCTGLTMTNRRFDELFGGPPRSAESR
                     LTQREMDIAASIQVVTEEVVLRLCKSLHETTGETNLCLAGGVALNCVANGRVLREGPF
                     EDIWIQPAA"
     gene            complement(1121..>2122)
                     /locus_tag="VIQ99_07475"
     CDS             complement(1121..>2122)
                     /locus_tag="VIQ99_07475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-alpha-hydroxyglycine alpha-amidating
                     lyase family protein"
                     /protein_id="HEY9183024.1"
                     /translation="RGELPIVGRPPTQRLRDVAPSLEFPVFRLPFRSATIASPPAGGA
                     AGTMPPDGLKAWQEQGGVLGVDARWEHCVLVLDRDGNIVEQWTQWDSLLARPHAVYVS
                     PYDADKHVWIVDDFRHAIFKFTNDGKTLVQTIGTFNEPGSDAAHFFRPTFMAWLPDGA
                     FFVADGYENTRVVKFDAAGRYLMAWGEKGTPPNDTRPGYFNNVHGIAVDPRTRRVFVN
                     DRANNRAQVFDEHGRFLDEWTFGGPPSDIHAFLIDGAGYLWAADRGTNKMLKYSLDGQ
                     LLYSWGTWGVFPGGFWGVHGISVDAEGSFYTAEVDTGRVQKFRPLADADPRFLVIPP"
BASE COUNT          363 a          683 c          699 g          377 t
ORIGIN      
        1 ggccgccggt tgaatccaaa tatcttcgaa aggcccttcg cgcagcacgc gcccattcgc
       61 gacgcagttc agcgcgacgc cgcccgcgag gcagaggttc gtctcgccgg tggtctcgtg
      121 caggctcttg cagagccgca gcacgacctc ctcggtcacg acctgaatcg aagctgcgat
      181 gtccatttcg cgctgcgtca agcggctctc ggcggatcgt ggcggtccgc cgaacagctc
      241 gtcgaagcgg cgattcgtca tcgtcaggcc cgtgcagtag ttgaagtact gcatgtcgag
      301 acggaacgtc ccgtcgtcct tgagatcgag caggttcttg agaatcaggt cgacgtactt
      361 gggctggccg tacggcgcca accccatgag cttgtattcg cccgagttga ccttgaagcc
      421 cgtgaagtac gtgaacgccg agtacaacag gccgagcgag tgcgggaagt cgatttccca
      481 cagcggctcg agcttcgcgc ccgacccacg ccaggccgag gtcgtggccc actcgccgac
      541 gccgtcgagg cacagcaccg ccgcgcgctc gaacgggctg aagtagaacg cggacgccgc
      601 gtgcgactgg tgatgctcgg cgaacaacag cgcgggcagg tctttcgtct tgcaggcgcc
      661 gagctcggcg agctccttgc gcagcgtggt cttcaagtac agcttttcct tgagccacac
      721 cggcatcgcc gcgatgaacg accggatgcc gttcggcgca tagctcaggt aggtctcgag
      781 cagccgttcg aatttcacga gcggcttgtc gtagaacacg acgcggtcga cgtcggtcag
      841 cgcgacgccg gcttcttgga ggcagtacct gatcgcgtgc gcggggaagc gcgcatcgtg
      901 cttcttgcgc gagaaacgtt cctcttgcgc ggcggcgacg acctcgccat cgacgaggag
      961 tgcggcggcg ctatcgtggt agtaggcgga aatcccgaga atcgtgttgt tgttcttagg
     1021 tgcgtccatg cgggtcgggg ttacgggcat cgggcagcca ccattatgcc gatcggcagc
     1081 caaaaagctt gtgagctgtt caccataatt acatgatttc tcatggcgga atcacgagaa
     1141 acctcgggtc ggcgtctgcg agcggccgga acttctggac ccgcccggta tcgacctcgg
     1201 ccgtatagaa gctgccttcc gcgtcgacgc tgatgccgtg cacgccccag aagccgcccg
     1261 ggaagacgcc ccaggtcccc caggagtaca gcagctgccc gtccagcgag tacttcagca
     1321 tcttgttggt gccgcggtcc gcggcccaca ggtaaccggc cccgtcgatc aggaacgcat
     1381 ggatgtccga gggcgggccg ccgaacgtcc attcgtctag gaaccggccg tgctcgtcga
     1441 acacctgggc gcggttgttg gcccgatcgt tcacgaacac ccgccgcgtg cgcggatcga
     1501 cggcgatgcc atgcacgttg ttgaaatagc cggggcgcgt gtcgttcggc ggcgtgcctt
     1561 tctcgcccca ggccatcagg tatctgcccg ccgcgtcgaa cttcacgacg cgcgtgttct
     1621 cgtagccgtc cgcgacgaag aacgcgccgt cgggtagcca cgccatgaac gtgggccgga
     1681 agaaatgcgc ggcgtcggag ccgggctcgt tgaaggtgcc gatcgtctgc acgagcgtct
     1741 tgccgtcgtt cgtgaacttg aagatcgcat ggcggaagtc gtcgacgatc caaacgtgtt
     1801 tatcggcgtc gtacgggctc acgtagacgg cgtgcggccg cgcgagcagc gaatcccatt
     1861 gcgtccattg ctcgacgatg ttgccgtcgc gatcgagcac gagcacgcag tgctcccagc
     1921 gcgcgtcgac gccgagcacg ccgccttgct cctgccaagc cttgagcccg tcgggcggca
     1981 tcgtgcccgc ggcgccgccg gcgggtgggc ttgcgatcgt cgcgctccgg aacggcaagc
     2041 ggaacacggg aaactcgagg ctcggcgcca cgtcgcggag ccgctgcgta ggcggccggc
     2101 ccacgatcgg caactcgccg cg
//
LOCUS       DATCUD010000511         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69154, whole genome shotgun sequence.
ACCESSION   DATCUD010000511 DATCUD010000000
VERSION     DATCUD010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69154"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /gene="raiA"
                     /locus_tag="VIQ99_07480"
     CDS             <1..316
                     /gene="raiA"
                     /locus_tag="VIQ99_07480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEY9183025.1"
                     /translation="MQLSVTGHHIEITESLRNYVATKLAKLERHFDHMTDIHCVLTVE
                     KLEHKAEATIQVGGGTIHAEQIEPNMYAAIDILVDKLDRQVKKHKEKLTDHHAKDVAR
                     YR"
     gene            353..1201
                     /gene="rapZ"
                     /locus_tag="VIQ99_07485"
     CDS             353..1201
                     /gene="rapZ"
                     /locus_tag="VIQ99_07485"
                     /inference="COORDINATES: protein motif:HMM:NF015620.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEY9183026.1"
                     /translation="MIISGVSGSGKSVALHVLEDLGFYCIDNIPVPLLKSFIEEIVPR
                     NDPAFENVGIGLDARSRPSDLAEVPTLVQKLRSEGLSCEIIFLQTDTKVLLSRFSETR
                     RKHPLTDDKTSLEEAIAKEREILAPVINSAELVIDTTRMSVYALREQIRERVAPRMPG
                     SVSIMIESFGYKHGLPANADFVFDVRCLPNPYWEPQLRPLSGKDEPVKAFLDAAPMVQ
                     RMVDDITAFLEEWIPRYQDFQRSYLTVAIGCTGGMHRSVYVAEAIAQRLAAKHGNIRT
                     HHNEVR"
     gene            complement(1216..>2097)
                     /locus_tag="VIQ99_07490"
     CDS             complement(1216..>2097)
                     /locus_tag="VIQ99_07490"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY9183027.1"
                     /translation="LGVRNPTSLLDNAPLRDLLDENVRFDGIRRSIQQGHLDAVAVTA
                     SSYATARSVTFFQGRPELESWTRIRRIGRATRLSVEHLMASAAVPFVFPPVRIGGEFY
                     GDGSMRHRAPLSPSIHLGADRILVVGVRDERPDAEPPAGYDPEPPTFAHLGGYMLDTL
                     FMDGLYTDLERLSRTNRILEQLGGKKLTGPLAALRPLHTLVVVPHQDVRSIAKEHVRE
                     LPHGVRILLRGLGASSRSGLQLVSYLLFESGFTRALIDMGYRDAMEMEDELRAFLFDQ
                     PMDTLYAPAHLKLALDR"
BASE COUNT          417 a          689 c          658 g          333 t
ORIGIN      
        1 catgcagttg agcgtcacgg ggcaccacat cgagatcacg gagtcgctgc gcaactacgt
       61 cgccaccaag ctcgcgaagc tcgagcgcca tttcgatcac atgaccgaca tccactgcgt
      121 gctcaccgtc gagaagctcg agcacaaggc cgaggccacg atccaagtcg gcggcggcac
      181 gatccacgcc gagcagatcg aaccgaacat gtatgcggca atcgatatcc tcgtcgacaa
      241 gctcgaccgc caggtcaaga aacataaaga gaagctcacc gatcaccacg cgaaggacgt
      301 ggcacgctat cgttgagccg gcactccgaa atggagcgta cgattgcggc tcgtgatcat
      361 cagcggcgtc tcgggctctg gcaagagcgt ggctctccac gtgctcgagg acttgggctt
      421 ctattgcatc gataacatcc cggtaccgct gctcaagtcg ttcatcgaag agatcgtccc
      481 gcgcaacgac ccggcattcg agaatgtcgg catcgggctc gacgcccgca gccgacccag
      541 cgatctcgcc gaggtgccga ctctcgtgca gaagctccgc tccgaggggc tctcgtgcga
      601 gatcatcttc ctccagaccg acacgaaggt gctcctgtcc cgcttcagcg agacgcgccg
      661 caagcatccg ttgacggacg acaagacgag tctcgaggag gcgatcgcga aggaacgtga
      721 gatactcgcg ccagtgatca actccgccga gctcgtgatc gacacgacgc ggatgtcggt
      781 ctacgcattg cgcgagcaaa tacgcgaacg cgtcgcaccg cgcatgccgg ggtccgtgtc
      841 gatcatgatc gaatcgttcg gctacaagca cggcctgccg gccaacgccg acttcgtgtt
      901 cgacgtgcgc tgcctgccga acccttactg ggagccgcag ctccgtccgc tgtccggcaa
      961 ggacgagccg gtcaaagcat ttctcgacgc cgcgccgatg gtgcagcgca tggtcgacga
     1021 catcacggcg ttcctcgagg aatggattcc gcgctaccag gactttcagc gctcgtacct
     1081 gacggtcgcg atcggctgca ccggcggcat gcaccgctcg gtgtacgtgg ccgaggccat
     1141 cgcgcagcgg ctcgcggcca agcacggcaa catccgcact caccataacg aagtgcgctg
     1201 agcacaaccg cgatatcaac gatccagcgc gagcttcaag tgcgcgggcg cgtacagcgt
     1261 gtccatcggc tgatcgaaca ggaatgcgcg cagctcgtct tccatttcca tcgcatcgcg
     1321 ataacccatg tcgatcagcg cgcgcgtgaa tcccgactcg aagagcagat agctcacgag
     1381 ctgcaaaccg ctgcggctgc tggctcctag cccccgcagc agaatccgga ctccgtgcgg
     1441 cagctcgcgc acgtgctcct tcgcgatcga gcgaacgtcc tgatgtggca cgacgaccag
     1501 cgtgtgcaac ggccgcaaag ccgcgagggg gccggtcagc ttcttgccgc caagttgctc
     1561 gaggattcgg ttggtccgcg agaggcgttc gaggtcggtg tacaggccat ccatgaacag
     1621 cgtgtcgagc atgtagccgc ccaggtgcgc gaacgtcggc ggctccggat cgtagccggc
     1681 gggcggctcg gcgtcggggc gctcgtcgcg cacgccgacg acgaggattc ggtctgcgcc
     1741 caagtggatc gacggcgaca gcggcgcgcg atggcgcatc gagccgtcgc cgtagaactc
     1801 tccgccgatt cgcacgggtg gaaaaacgaa cggcacggcc gcgctcgcca tcaggtgctc
     1861 gaccgaaagg cgcgtcgcgc ggccgatacg gcgtatccgc gtccacgact cgagctcggg
     1921 gcggccctga aaaaaagtca cggagcgcgc cgtcgcatac gacgacgccg tcacggcgac
     1981 ggcgtcgaga tggccctgct ggatcgagcg gcgaatgccg tcgaaacgca cgttttcgtc
     2041 cagcaggtcg cgcagcggcg cgttgtcgag cagcgaggtc ggattgcgca cgcccaa
//
LOCUS       DATCUD010000512         3013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_26405, whole genome shotgun sequence.
ACCESSION   DATCUD010000512 DATCUD010000000
VERSION     DATCUD010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26405"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..255
                     /locus_tag="VIQ99_07495"
     CDS             <1..255
                     /locus_tag="VIQ99_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-L-glycero-D-mannoheptose-6-epimerase"
                     /protein_id="HEY9183028.1"
                     /translation="GRKSGVFNVGTGSSSTFNDVARAIIEWHDRGTIRYVPFPPELVS
                     RYQSFTEADIDALREAGYSRAFRDVRAGIKDYLDALRLRS"
     gene            252..1319
                     /gene="waaF"
                     /locus_tag="VIQ99_07500"
     CDS             252..1319
                     /gene="waaF"
                     /locus_tag="VIQ99_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018991835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEY9183029.1"
                     /translation="MTAADKVLVVGPSWVGDMVMAQSLYRLLRKRSPSSEIHVVAPRW
                     SLPILKRMPEVHRGIELDVGHGELGLGRRRALGRNLRGERYTRAIVLPRSAKAALVPW
                     FARIPRRTGFRGEWRYGLLNDVRKLDTRLDQTVKRFVALGQERDEEPRESLDADLRPR
                     LRADPDNLERLRAEHALTPGAPLVALMPGAEYGVAKRWPPAYYGEVAATFARAGADVV
                     VLGSAKEREIGDAVVAASANARVRNLCGRTALVDVVDLLSGGTVAISNDSGLMHVAAA
                     AGAPIVAIYGSSSPAFTPPLTDTAAVLWLALECSPCFERECPLGHLRCLKELTPAKVL
                     DAVVTLRGSGSVSAGTGDGCR"
     gene            1316..2041
                     /locus_tag="VIQ99_07505"
     CDS             1316..2041
                     /locus_tag="VIQ99_07505"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: protein motif:HMM:NF002475.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HEY9183030.1"
                     /translation="MSEPRIVVDGSHTMLVDDALNETPVTAWFDAAQWRRSGAAAVET
                     SGRGAALIVDHGSDTWVLRHYRRGGLVARFIDDHYFWSGVERTRAFREWRLLRKLRDA
                     GLPVPNPVAAHVHRTGPIYTADIITSWLPDTRKLSSFIARGCVPADSWRRVGAMIRAV
                     HDHGVDHPDLTAHNVLLDGAGNTFLVDFDNAYFKEPGEWRRLGLERMNRSLRKVALET
                     GTDFDAAAWRELEAGYAGPRVGG"
     gene            complement(2064..2489)
                     /gene="mscL"
                     /locus_tag="VIQ99_07510"
     CDS             complement(2064..2489)
                     /gene="mscL"
                     /locus_tag="VIQ99_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020886033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEY9183031.1"
                     /translation="MLKEFKEFAMRGNVMDMAVGIIIGAAFGKIVTSLVNDIIMPPIG
                     LLMGNVDFSDLFVNLTMGSDYPSVAAAEAAGAPIVKYGMFINTVLDFVIVAFAIFLLI
                     RAINKLKRKQEAAPAAPPPPSAQEKLLAEIRDLLKAQSR"
     gene            complement(2578..>3013)
                     /locus_tag="VIQ99_07515"
     CDS             complement(2578..>3013)
                     /locus_tag="VIQ99_07515"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipid A biosynthesis acyltransferase"
                     /protein_id="HEY9183032.1"
                     /translation="VLIRRGRHRFATEQIPRDNVRALVRSLRDNHAVLYSPDQTYLGN
                     QSALLPFFGEPAVTNTATSKLAKISGATVLPYFFRRLPNGHYRVDIGPPLADFPSDSP
                     ARDSERLFALLEDYIRLAPEQYLWLYKKFKGRPPPFVDVYAR"
BASE COUNT          480 a          956 c         1043 g          534 t
ORIGIN      
        1 gggcgaaagt ctggcgtgtt caacgtcggc accggctcga gctcgacgtt caacgacgtg
       61 gcgcgcgcca tcatcgaatg gcacgacagg ggcacgattc gctatgtccc gtttccgccg
      121 gagctcgtgt ctcgctacca aagcttcacc gaggcggaca tcgacgcgct gcgcgaggcc
      181 ggttactcgc gcgcgttccg cgacgtgcgg gcggggatca aggattacct ggacgcgctt
      241 aggctcaggt cgtgaccgct gcggacaagg tattggtcgt cggcccatcc tgggtaggcg
      301 acatggtcat ggcgcagtca ctctatcgct tgttgcgcaa gcgaagccca tcgagcgaga
      361 ttcatgttgt cgcgccgcgg tggtcgttac cgatactgaa gcgcatgccg gaagttcacc
      421 gtggcatcga gctcgacgtc ggccacggcg agctcggcct cgggcggcgc cgtgcgcttg
      481 ggcggaatct tcgcggcgag cgctacacgc gcgcgatcgt gctgccgcgc tcggcgaagg
      541 ccgcgctcgt gccatggttc gcgcggattc cgcgccggac agggtttcgc ggcgagtggc
      601 gttacggcct cttgaacgac gttcgcaagc tcgacacgcg cctcgatcag accgtgaagc
      661 ggttcgtcgc gctggggcaa gagcgcgacg aggagccgcg ggagtcgctg gatgcggacc
      721 tgcgcccgcg actgcgcgct gatccggaca atctcgaacg acttcgggcc gagcatgccc
      781 tgacacccgg cgcaccgctc gtcgcgttga tgccgggcgc cgagtacggt gtcgccaagc
      841 gctggccgcc ggcttactac ggcgaagtcg cggcgacgtt cgcccgcgcc ggcgccgacg
      901 tcgtggtact cggatccgcg aaggagcgcg agatcggtga cgccgtcgtc gccgcgagcg
      961 ccaacgcgcg cgtccgcaac ctgtgcgggc gcactgcgct cgtcgacgtc gtggatctgc
     1021 tgtcgggcgg caccgtcgcg atcagcaacg actcgggatt gatgcacgtc gcggccgcgg
     1081 ccggggcgcc gatcgtcgca atctatggct cgtcgtcgcc ggcattcacg ccgccgctga
     1141 ccgacacagc ggccgtcctc tggctcgcgc tcgagtgcag cccgtgcttc gagcgcgagt
     1201 gcccgctcgg gcatctgcgc tgtctcaagg agctcacgcc ggcgaaagtg ctcgatgccg
     1261 tcgtaacgct gcgagggagc ggttccgtca gtgccggcac gggagacggt tgccgatgag
     1321 cgagccccgc atcgtcgtcg acggctcaca cacgatgctc gtcgatgacg cgctgaatga
     1381 gacgccggtg acggcctggt tcgatgcggc acagtggcgg cgcagcggcg ccgccgcggt
     1441 cgagacatcg ggccgcggcg cggcactgat cgtcgaccac ggcagcgaca cgtgggtgct
     1501 gcgccactat cgccgtggcg ggctcgtcgc ccgtttcatc gacgatcact atttttggtc
     1561 gggagtagaa cggacgcgtg cgttccgcga gtggcgtttg ttgcgcaagc tgcgggatgc
     1621 cggtttgccc gtgccgaatc ccgtcgctgc ccatgtccat cgtacggggc cgatctacac
     1681 cgccgacatc atcacatctt ggctgccgga cacgcgcaag ctgtcgtcgt tcatcgcgcg
     1741 aggctgcgtg ccggccgatt cctggcggcg cgtcggggcg atgattcgag cggtgcacga
     1801 tcacggcgtc gatcatcccg atctcaccgc gcacaacgtg ttgctcgacg gtgccggtaa
     1861 cacgttcctc gtcgacttcg acaacgcgta tttcaaagag cccggcgaat ggcggcgctt
     1921 gggtctcgag cggatgaacc gttccttgcg caaggtggcg ctcgaaaccg gcaccgactt
     1981 cgacgccgcg gcgtggcgcg agctcgaagc cggctatgcc ggcccgcgcg tcggcggcta
     2041 gccaccgcca ggggacggct cgttcagcgg ctctgggcct tcaggaggtc gcgtatctcc
     2101 gcgagcagct tttcctgcgc tgacggcggc gggggcgctg ccggcgcggc ctcctgcttc
     2161 ctcttcagct tgttgatggc gcggatcaac aggaagatcg cgaacgccac gatcacgaaa
     2221 tcgagcaccg tgttgatgaa catcccgtac ttgacgatcg gggcgccggc cgcttcggcg
     2281 gcagcgacgc tcggatagtc ggagcccatc gtgagattca cgaacagatc gctgaagtcg
     2341 acgttgccca tcaggaggcc gatcgggggc atgatgatgt cgttcacgag cgaagtcacg
     2401 atcttgccga aggcggcgcc gatgatgatg ccgacggcca tgtccatgac gttgccgcgc
     2461 atcgcgaact ctttgaattc tttcagcatc gatttctcca gttcctcgtt gttgaagcgg
     2521 atggcccgag tgggcctacg cgaccagttt acgcccggcg tcgcggtcgt ggatccttca
     2581 gcgcgcgtag acgtcgacga aaggcggcgg ccggcctttg aacttcttgt agagccatag
     2641 atattgctcc ggtgcgagac gaatgtagtc ctcgagcagc gcgaacagcc gctccgaatc
     2701 gcgcgcgggg gagtccgaag gaaagtccgc gagcggcggg ccgatgtcca cgcggtaatg
     2761 gccattcggc aggcgccgga agaaataagg tagaacggtc gcgccgctga tcttcgcgag
     2821 cttgctcgta gccgtgttcg tgaccgcggg ctcgccgaag aacggcaaca gcgcgctctg
     2881 attgccgaga taggtctggt ccggcgagta gagcacggcg tggttgtcgc gcaagctacg
     2941 caccagggcg cgaacgttgt cgcgtggaat ctgctctgtg gcgaagcgat ggcgcccgcg
     3001 gcggatcagc acg
//
LOCUS       DATCUD010000513         2627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19339, whole genome shotgun sequence.
ACCESSION   DATCUD010000513 DATCUD010000000
VERSION     DATCUD010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2627
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19339"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VIQ99_07520"
     CDS             complement(<1..394)
                     /locus_tag="VIQ99_07520"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183033.1"
                     /translation="MHRTTLLAAAAVLAATLCTDAYAHHAFATEFDANLTGEVKGEVT
                     RVWWQNPHIRYDVAMKMPDGSTETWALLPPGNLPTYRRENWTEQTIQVGYAVTATGNL
                     GRDGTKKLYATCINLTSGPEKGRQLGRCV"
     gene            complement(432..1904)
                     /locus_tag="VIQ99_07525"
     CDS             complement(432..1904)
                     /locus_tag="VIQ99_07525"
                     /inference="COORDINATES: protein motif:HMM:NF022525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2779 domain-containing protein"
                     /protein_id="HEY9183034.1"
                     /translation="MRAPIALSKTKLLSLTQCRRKLWLETYNPELVPEPSAEKRTLLD
                     VGNVVGEIARRLYGRGGGHVVSFDRGLRAAIDATRALIAAGGSEPIFEATFDRDGVSA
                     RIDVLERGEHAPRMIEVKSSASVKEHYLDDCAVQAWALEENGLAPRQIAVATIDTSFV
                     YEGDGRYDGLLVETDVTDLVRARLPLVPKLVSEARQLLAQLDEPDVAVGVHCGAPHGC
                     DFYSHCGPPATKYSVLALSGSKEQLFELLHSGFADVRDVPEDRLTSDTQRLIWRQSRA
                     EQAHIGAELKQLARALPFPRYYLDFETMGPAVPIFAGTRPFEALPFQWSCHIEPQRGT
                     VEHAEFLDLSSAPPMRALAEHLVAALGTQGPIVVYTQYERRVIGDLAARYPDLAERLH
                     AAAERIVDLHPATRAHYYHPAMQGSWSIKAVVPTVAPDLRYDTLRDVRDGLGAQAAYL
                     EAIDPKTPPARRTALDAALRAYCRQDTLALVRLVEFFARD"
     gene            1983..>2627
                     /locus_tag="VIQ99_07530"
     CDS             1983..>2627
                     /locus_tag="VIQ99_07530"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9183035.1"
                     /translation="MRAQSIWLGVALASSVGFGSRVLAQPPPTAPVLVPKAGQPLTFD
                     VGRQKIRVALVSDGLAGPWDIVFIPGTSDLLVTESNGKLRMIQNGKLLPDAVWTPPSP
                     TGNDILHGVVVHPDFATNQLVYVSYMKGDDTRQTLGVSRGRLVGAKLVEAKEIFVADA
                     WENARMAYTGRMEFGPDKTLYVSVGDRDRLCCGQKDDNSIRIRAQSLADHVGKIL"
BASE COUNT          414 a          870 c          902 g          441 t
ORIGIN      
        1 tgacgcagcg cccgagctgc cggccttttt ccggcccgct ggtgaggttg atgcaagtcg
       61 cgtagagctt cttcgtgccg tcgcggccca agttgccggt ggccgtgacc gcgtagccga
      121 cttggatcgt ctgctcggtc caattctcgc gccgatacgt cggcaaattg ccgggcggca
      181 acaacgccca cgtctcggtc gagccgtccg gcatcttcat cgcgacgtcg taacggatgt
      241 gagggttctg ccaccacacg cgagtgactt cgcccttgac ctcgccggtg aggttcgcgt
      301 cgaactcggt cgcgaatgcg tgatgcgcgt acgcgtctgt gcagagcgtg gcagcgagaa
      361 cggctgcggc agcgagcagg gtggtgcggt gcatggcaaa cctctggcgg cgttgacctt
      421 ctctgcctag tctaatcccg cgcgaagaac tcgacgagcc gcacgagcgc caacgtgtcc
      481 tgacggcagt acgcgcgcag ggcggcgtcg agagcggtgc gccgggccgg cggggtcttg
      541 gggtcgatcg cctctaaata ggcggcctga gcgccgagcc cgtcgcggac gtcacggaga
      601 gtgtcgtaac ggaggtccgg ggctacggtc ggcaccacgg ctttgatcga ccacgagccc
      661 tgcatcgcgg ggtggtaata atgcgcgcgc gtcgcgggat gcaggtcgac gatgcgctcg
      721 gcggccgcgt gcaggcgctc ggcgagatcc ggatagcgcg ccgcgagatc gccgatcacg
      781 cgccgctcgt actgcgtgta gacgacgatc ggcccctgcg tgccgagcgc tgcgaccaag
      841 tgctcggcga gcgcacgcat cggcggcgcc gagctcaagt cgaggaactc cgcgtgctcg
      901 accgtgccgc gctgcggctc gatgtggcac gaccattgga acggcagcgc ctcgaacggc
      961 cgcgtgcccg cgaagatcgg cacggccggc cccatcgtct cgaagtccaa atagtagcgc
     1021 gggaacggca gcgcacgcgc gagctgcttg agctccgcgc cgatgtgcgc ttgctccgcg
     1081 cgcgactggc gccagatcaa gcgctgcgtg tcgctcgtga gccggtcctc cggcacgtcg
     1141 cgcacatccg cgaaccccga atgcagcagc tcgaacagct gttccttgct gccgctcaag
     1201 gccagcaccg aatacttcgt cgccggcggc ccgcagtgcg agtagaagtc gcagccgtgc
     1261 ggcgcaccgc aatggacacc gaccgcgaca tcgggctcgt cgagctgcgc gagcagctgc
     1321 cgtgcttcgc tcacgagctt cggcacgagt ggcagtcgcg cgcggaccaa gtccgtgacg
     1381 tcggtctcga cgagcagccc gtcgtaccgg ccgtcgcctt cgtagacgaa gctcgtgtcg
     1441 atcgtcgcga cggcgatttg ccgcggtgcg agcccgttct cttcgagcgc ccacgcctgc
     1501 acggcgcaat cgtcgagata gtgctctttg acgctcgccg acgatttcac ttcgatcatc
     1561 ctcggcgcgt gctcaccgcg ctcgagcacg tcgatccggg cgctgacgcc gtcgcgatcg
     1621 aacgtggctt cgaagatcgg ctcgctgccg ccggccgcga tcaatgcgcg cgtcgcgtcg
     1681 atcgcggcgc ggaggccccg gtcgaagctc acgacgtgac ctccgccgcg gccgtacagc
     1741 cgccgcgcga tctcgccgac gacgttgccg acgtcgagca gcgtgcgctt ctcggccgac
     1801 ggttccggta cgagctcggg gttgtaagtc tcgagccaga gcttgcgccg acactgggtc
     1861 agcgacagca gcttcgtctt cgagagggcg atcggtgcgc gcatggcggc gcagtatggc
     1921 ggcggcagtg ccggaacggt agcatcgacc tttgtccgaa tgaccggatt tcgggggatt
     1981 tcatgagagc gcagtcgatc tggctcggcg tagccttggc ctcgagtgtc gggttcgggt
     2041 cccgcgtgct cgcgcagccg ccgccaacgg caccggtgct cgtgccaaag gccggccagc
     2101 cgctgacctt cgacgtgggc cgacagaaga ttcgcgtcgc gctcgtttcc gacgggctcg
     2161 ccgggccgtg ggacatcgtg ttcatccccg gcacgtcgga tctgctcgtg accgagagca
     2221 acggcaagct ccgcatgatt cagaacggca agctgctgcc ggatgcggtg tggactccgc
     2281 cgtccccgac tggcaacgac atcctgcacg gcgtcgtcgt gcatcccgac ttcgcgacca
     2341 accagctcgt gtacgtgtcg tacatgaagg gcgacgacac gcgtcaaacg ctcggtgtct
     2401 cgcgcggccg cttggtcggc gcgaagctcg tcgaggcgaa agagatcttc gtcgccgacg
     2461 cgtgggagaa cgcgcggatg gcgtacacgg gccgcatgga gttcgggccc gacaagacgc
     2521 tgtacgtcag cgtcggcgat cgcgatcgtc tgtgctgtgg ccagaaggac gacaacagca
     2581 ttcgaattcg cgcgcagagc ctggccgacc acgtcggcaa gatcctg
//
LOCUS       DATCUD010000514         1607 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5391, whole genome shotgun sequence.
ACCESSION   DATCUD010000514 DATCUD010000000
VERSION     DATCUD010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5391"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1027)
                     /locus_tag="VIQ99_07535"
     CDS             complement(<1..1027)
                     /locus_tag="VIQ99_07535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183036.1"
                     /translation="MLAAASSTALVLALSLTRPWTPKVPRVWDEKALETWATPLAGLN
                     ARPTHMSAAEYYAIPEENLRTYPVYMPDREPAGHWETILRAGPQRLFDPERIETDAEW
                     VAAGELVFFDSVVLRTLDAKVIATARDQTAMEALGTGPLPDGTINGLRWVPTQDGVAL
                     GFTNCSACHLLFLPDNTQVPGASSFAIPNTFRNGLGGAIRAAERTLPGETPFSFSGPI
                     GSAAYQAYGVPWIADPAGERLRDMTQAEFNAWIGAGIRGGGVARFNGSILYPTKIPDL
                     IGIKDRKYIDHTGTHRHRGIGDLMRYAALVSFAEAVDFAGRRMILPETERFRTRLPDE
                     ALYALALY"
     gene            complement(1083..>1607)
                     /locus_tag="VIQ99_07540"
     CDS             complement(1083..>1607)
                     /locus_tag="VIQ99_07540"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEY9183037.1"
                     /translation="GYSTGGWYGAPLDIPGNRPRSNGQPPPPVTQSVEEMKRERHLSE
                     TDVMNVLALVTREYNVDPDRTFLMGHSMGGMGTYVLGQKYAERWAAIAVMSGTLADAT
                     YDLERLRNMAVMLSAGEQEAAVVEAAEAQIEAMQALGITTGLFVAPGATHGSMVAPTI
                     PEVLEFFADKRRNR"
BASE COUNT          264 a          528 c          542 g          273 t
ORIGIN      
        1 catacaacgc cagcgcgtac agcgcttcgt ccggcaagcg cgtccggaag cgctccgtct
       61 cgggcaggat catgcgtcga ccggcgaaat cgacggcctc cgcgaagctg accaacgcgg
      121 cgtaccgcat gaggtcgccg atgccgcggt ggcgatgcgt gccggtgtgg tcgatgtact
      181 tacggtcctt gatgccgatg aggtctggaa tcttggtcgg atagagaatg ctgccgttga
      241 agcgggcgac gccgccaccg cgaatgccgg cgccgatcca ggcgttgaat tcggcttgcg
      301 tcatgtctcg caaccgctcg ccggccgggt cggcgatcca tgggaccccg tacgcttgat
      361 aggccgcgga gccgatcggc ccgctgaacg agaacggcgt ctcgcccggt aacgtgcgtt
      421 ccgctgcgcg gatcgcgccg ccgaggccgt tgcgaaaagt gttcgggatc gcgaacgacg
      481 aggcgcccgg cacctgcgtg ttgtcgggca ggaacagtag atggcaggcg ctgcaattcg
      541 tgaacccgag cgcaacgcca tcctgcgtgg gcacccaacg tagaccgttg atggtgccgt
      601 ccggcaaggg ccccgtgccc agggcttcca tcgcggtttg gtcgcgcgcc gtcgcgatga
      661 ccttcgcgtc gagcgtgcgc agcacgacgg agtcgaagaa cacgagctct cctgccgcga
      721 cccactcggc atcggtctcg atccgttctg gatcgaagag ccgctgcgga cccgcgcgga
      781 ggatcgtctc ccagtggccg gcgggctccc ggtcgggcat gtacacggga tacgtgcgga
      841 gattctcctc gggaatcgcg tagtactcgg cggcggacat gtgagtaggc cgcgcgttca
      901 atccggcgag aggcgttgcc caggtctcga gagccttttc gtcccagacg cgcggaacct
      961 tcggcgtcca cggccgcgtc aggctcagcg cgaggaccag cgcggtcgag gaggcggctg
     1021 cgagcaacca acccgatttg agccacgaac gagagcgaga aggggccacg ccggtcactg
     1081 cgttaacggt tgcgcctctt gtcggcgaag aactcaagaa cctcgggtat cgtcggcgca
     1141 accatcgatc cgtgcgtggc gcccggcgcc acgaacaggc ccgtcgtgat accgagcgct
     1201 tgcatcgctt cgatctgcgc ctcggccgcc tcgacgaccg cggcttcctg ctccccggcc
     1261 gacagcatga ccgccatgtt gcgcaaccgc tcgaggtcat acgtcgcatc ggccagcgtg
     1321 ccggacatga cggcgatcgc ggcccaccgc tcggcgtact tttggccgag aacgtaggtg
     1381 cccatgccgc ccatcgaatg ccccatcaag aaggttctgt cgggatcgac gttgtactcc
     1441 cgcgtgacga gagcgagcac gttcataacg tccgtctcgc tcaagtggcg ctcgcgtttc
     1501 atctcctcca cgctctgggt cacgggcggg ggcggttggc cgttgctacg cgggcggttg
     1561 ccgggtatgt cgagcggtgc gccgtaccac ccgcccgtgg agtaacc
//
LOCUS       DATCUD010000515         1541 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5399, whole genome shotgun sequence.
ACCESSION   DATCUD010000515 DATCUD010000000
VERSION     DATCUD010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5399"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..807
                     /locus_tag="VIQ99_07545"
     CDS             106..807
                     /locus_tag="VIQ99_07545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183038.1"
                     /translation="MAKREDDVLDRRALVAGVGVAVAGLVASASAARAQTAPRESSGR
                     FEPARHRLDAWLDELSGSHRIFIDSGSANGGAEAVGYANNLYIATASAYTGEQADLAT
                     VICFRHFSTPFGYNDAMWEKYGEAFHSLIQFPDPSTGAAPKVNMLNSAAHKTLGNRGV
                     TIDALVAKGAHFAICNMATQLIASVAAQRTGGKTEDVHRELVANAIANSHFVPAGVMA
                     LTRAQEYGYSLLVAG"
     gene            complement(832..>1541)
                     /locus_tag="VIQ99_07550"
     CDS             complement(832..>1541)
                     /locus_tag="VIQ99_07550"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9183039.1"
                     /translation="KPGTLSLLQTASRYPRPSGRDGGVRDLKDRINGCMVRSMNGREL
                     PRDGVEMLAMVAYLDHLGDVYATTGESRRASAEPAAFAEPDRAASPAAGERVYVERCA
                     VCHGAEGQGLRATDNPRDGYVFPALWGPDSFNDGAGMHRVLTAAGFIKARMPFGQPDL
                     TDEQAFDVAAYINSQPRPAMGGLGADYPDRATKPVDSPYGPYADPFPPERHKYGPYAE
                     IRAWYAAQQAGARPGNQ"
BASE COUNT          253 a          538 c          524 g          226 t
ORIGIN      
        1 cgagccagcc ggcgccgcgc ggcgcacccg attgaccgcg acgcgaacgc cattgttgaa
       61 tgaccggggg cgggcggcca tcgacgccga agcgaggaaa ggacaatggc gaagcgagaa
      121 gacgacgttc ttgacaggcg ggcgctggtg gcgggcgtcg gagttgccgt cgcgggcctc
      181 gtcgcgagcg catcggctgc gcgcgcgcag acggctccgc gggagtcgag cgggaggttc
      241 gagcccgcgc gtcatcgact cgacgcgtgg ctcgacgagc tgtccggctc acaccgcatc
      301 ttcatcgatt cgggctctgc caacggcggt gccgaggccg tcggctacgc caacaatctc
      361 tacattgcca cggcgagcgc ctacacgggc gagcaggccg acctcgcgac cgtcatctgt
      421 ttccgtcact tctcgacgcc gttcggctac aacgacgcaa tgtgggagaa gtacggcgag
      481 gccttccact cgctgattca gttcccggat ccttcgacgg gcgccgcacc gaaggtcaac
      541 atgctgaact cggcggcaca caagacgctc ggcaaccgcg gagtgacgat cgacgcgctc
      601 gtggccaagg gagcccactt cgcgatctgc aacatggcga cgcagctcat cgcgagcgtg
      661 gccgcgcagc gcacgggcgg caagaccgag gacgttcacc gagagctcgt ggccaacgcg
      721 atcgccaaca gccacttcgt gcccgccggc gtcatggcgc tcacgcgcgc tcaagaatac
      781 ggctatagcc tgttggtcgc cggctgacct cgacctcgca cgcgccgcac gtcactgatt
      841 gccgggccgc gcgcccgcct gctgcgcggc ataccaggcc cgaatctcgg cgtaaggccc
      901 gtacttgtga cgctccggtg gaaacgggtc cgcatagggc ccatacgggc tgtcgacggg
      961 cttcgtggcg cgatccggat agtcggcgcc gaggccgccc atcgccgggc gcggctgcga
     1021 gttgatatac gcggcaacgt cgaaggcttg ctcatcggtg agatccggct ggccaaacgg
     1081 catgcgcgcc ttgatgaaac ccgcggcggt cagcacgcgg tgcattccgg caccgtcgtt
     1141 gaagctgtcg ggcccccaga gcgccgggaa cacatagccg tcgcgagggt tgtccgtcgc
     1201 gcgtaaccct tgcccctcgg cgccgtgaca cacggcgcaa cgctcgacat agacgcgctc
     1261 cccggccgcg gggctcgcgg cgcgatccgg ctcggcgaac gccgccggct cggccgacgc
     1321 gcgccggctc tcgccggtgg tcgcatagac gtcaccgaga tggtcgaggt acgcgaccat
     1381 cgccaacatc tcgacgccgt cccgcggcag ctcgcggccg ttcatgctgc gcaccatgca
     1441 gccgttgatg cgatccttga gatcgcgcac gccgccgtca cgcccggacg ggcgcggata
     1501 gcggctcgct gtctgcagca gcgacagcgt gcccggcttg g
//
LOCUS       DATCUD010000516         2013 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33547, whole genome shotgun sequence.
ACCESSION   DATCUD010000516 DATCUD010000000
VERSION     DATCUD010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2013
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33547"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1523)
                     /locus_tag="VIQ99_07555"
     CDS             complement(<1..1523)
                     /locus_tag="VIQ99_07555"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HEY9183040.1"
                     /translation="MRTAHCLDNAVRVAALAAVLALPMSAEATVEVVGIDGALAANVL
                     AYLDVDEEPCDAPPWRIEQQLRRTPLRVRDALQALGYYEPTVSTELADSPECWHVTLT
                     IDAGEPVRIRTLDIALTGEAERDPAFIRAREQAALSDGAVLNHGAYELLKRQWGDLAR
                     ERGYPEAEFLANRIDVYPDERVADIELKLDSGPRYSFGKLTLDQEVLTERLTTSYITF
                     LEGTPYDARQLSDAYTTLADSGFFRTIDVRPLEPDPATRTIPVSVSLTSAPRLHVNYG
                     VGFSTDTGPRFRFGRTNRRFNERGHQFGVDAQLSPVVSEFTANYRLPLRDSRRDWLNF
                     NAGIESQDTDTSESDLFEIGMRRVVERSEDWTRTEMLSWRRERFTIADQEDEDSQLLM
                     PGVNWTRLRADNDIRPRNGSKLSLGLQAATDAVISDSSFLQVLAQGKWIWSLQRGRRF
                     LVRGQVGTTSTDDFTELPASVRFFAGGDNSVRGYDFETLGPVDENGEVIGGSELATG"
     gene            1627..>2013
                     /locus_tag="VIQ99_07560"
     CDS             1627..>2013
                     /locus_tag="VIQ99_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018993643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HEY9183041.1"
                     /translation="MTVRTRFAPSPTGYLHIGGVRTALFNWLFARQRGGQFLLRIDDT
                     DQQRNIAEALQPILDGFRWLGLDWDEGPFYQTERYALYKEKIEQLLAQGQAYPCVCTS
                     EELDAKRRQAQKEKRKPMYDGTCRPSE"
BASE COUNT          337 a          657 c          672 g          347 t
ORIGIN      
        1 ctgccggtcg cgagctcgga gccgccaatg acctcgccat tctcgtcgac ggggccgagt
       61 gtctcgaagt cgtagccgcg gacgctgttg tcgccacccg cgaagaagcg caccgacgcc
      121 ggcagctccg tgaaatcgtc ggtcgacgtg gtcccgactt ggccgcggac caggaaccgg
      181 cggccgcgct gcagcgacca gatccatttg ccctgcgcga gcacctgcaa gaagctgctg
      241 tccgagatca cggcatccgt ggccgcctgg agcccgagcg acagcttcga cccgttccgc
      301 gggcggatgt cgttgtcggc gcgcagccgc gtccagttca cgccgggcat caacagctgc
      361 gagtcctcgt cttcctggtc cgcgatcgtg aaccgctcgc ggcgccagct cagcatctcg
      421 gttcgggtcc agtcctcgga gcgctcgacc acgcgccgca tgccgatctc gaacagatcg
      481 ctctcggacg tgtccgtatc ctggctctcg atgccggcgt tgaagttcag ccagtcgcgc
      541 cgcgagtcgc gtaacggcag tcgatagttg gccgtgaact ccgacacgac cggcgacagt
      601 tgcgcatcga cgccgaattg atggccgcgc tcgttgaatc ggcggttcgt gcggccgaag
      661 cggaagcgcg gcccggtgtc ggtcgagaaa ccgacgccgt agttgacgtg caagcgcggc
      721 gcgctcgtca gcgacacgga gaccgggatc gtgcgcgtgg cggggtcggg ctcgagcggg
      781 cgcacgtcga tcgtgcggaa gaagccgctg tcggccaacg tcgtgtaggc gtccgacagc
      841 tgccgagcat cgtacggcgt gccctcgagg aacgtgatgt acgacgtcgt gaggcgctcg
      901 gtcagaactt cttgatcgag cgtaagcttg ccgaacgaat aacgcggccc cgaatcgagc
      961 ttgagctcga tgtcggcgac gcgctcgtcc ggatagacgt cgatgcggtt agcgagaaac
     1021 tcggcttccg gatagccgcg ctcgcgcgcg aggtcccccc actggcgttt caacagctcg
     1081 taggcgccgt gattcaggac tgcgccgtcc gacagcgcgg cctgctcgcg cgcccgaatg
     1141 aacgcgggat cgcgctcggc ttcgcccgtc agcgcgatgt cgagcgtgcg gatccgaacg
     1201 ggctcgccgg cgtcgatcgt gagcgtgacg tgccagcact cggggctgtc cgcgagctcc
     1261 gtagagacgg tgggctcgta atagccgagc gcttgcagcg cgtcgcgaac gcgcagcggt
     1321 gtccgccgga gctgctgctc gatgcgccag ggcggcgcgt cgcaaggctc ctcgtcgacg
     1381 tcgagatagg cgagcacgtt ggccgcgagc gcgccgtcga tgccgacgac ttctacggtg
     1441 gcctcggccg acatcgggag cgcgagcaca gccgcgagcg cagctacccg cacggcgttg
     1501 tcgagacagt gtgccgtcct caagcgtgtt ctcgtccgat gtcgtgccgc gcgcggcttt
     1561 ccgagttctt cagtgtactt cgctgcgaaa acccgtacat tgtgccgcgc gtcgaccgag
     1621 gtccgcatga cagtacgtac tcgcttcgct ccgagcccca cgggctactt gcacatcggc
     1681 ggtgttcgca ccgcgttgtt caactggttg ttcgcgcgcc agcgcggcgg gcagttcttg
     1741 ctccggatcg acgacacgga ccagcagcgc aacatcgcgg aggccctgca gccgatcctc
     1801 gacggcttcc gctggctcgg tctcgactgg gacgaagggc cattttatca aacggagcgc
     1861 tacgcgcttt acaaggaaaa aatcgagcaa ctactggctc agggacaagc ctatccttgc
     1921 gtttgcactt ccgaggaatt ggatgccaag cgtcggcagg ctcagaaaga gaagcgaaag
     1981 cccatgtacg atggcacttg ccgaccctcg gaa
//
LOCUS       DATCUD010000517         2738 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19360, whole genome shotgun sequence.
ACCESSION   DATCUD010000517 DATCUD010000000
VERSION     DATCUD010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19360"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1078)
                     /gene="glmS"
                     /locus_tag="VIQ99_07565"
     CDS             complement(<1..1078)
                     /gene="glmS"
                     /locus_tag="VIQ99_07565"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020190289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEY9183042.1"
                     /translation="MCGIVGAIAERNIVPVLVEGLKRLEYRGYDSAGIAVVQANRQLG
                     LCRTVGKVAYLETKLHDKPLTGRLGVAHTRWATHGGVTEANAHPHLSGDRVAVIHNGI
                     IENYEPLRDELIAKGYEFKSETDTEVAAHLIHDYLKQGHDLLNALRLAVQRFQGAYAL
                     LAFDAKDPERIVVTRIASPLVIGLGIGENFVASGVPALLPVTQRFIYLEQGDIAEITR
                     VGVKVFDPQGQPVTRPVHETQWTEESAEKGPYRHFMLKEIFEQPSALADTLYGRVVNK
                     RVVPESLGPRAAELLSKVENIHIVACGTSYHAGCVGRYWLESIAGVPCQVEIASEYRY
                     RSVVVPPNTLFITLSQSGETADTLE"
     gene            complement(1091..2497)
                     /gene="glmU"
                     /locus_tag="VIQ99_07570"
     CDS             complement(1091..2497)
                     /gene="glmU"
                     /locus_tag="VIQ99_07570"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018915301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEY9183043.1"
                     /translation="MPVQQDLRGSRSVPVSVVVLAAGQGKRMHSARPKVLQPLAGRPL
                     LEHVVRAARALEPAAIHIVYGHGADEVRAVFADQPDLQWALQSEQLGTGHAVIQAMPA
                     IPDDHRVLVLCGDVPLIRAETLARLVADDARGRLSLLTAVVADATGYGRVLRDGSGAV
                     TRIVEHKDATEAERRVNEINTGLIAFDAGPLRRYLGKLENRNAQREYYLTDVIAMAVA
                     DKVEVRGIVAEAATEVLGINDRAQLAEAERAWQRRQAAELMARGVTLADPARLDVRGE
                     VTVGRDVFIDVGVVLEGKVVLGDRVRVGPYAVLTDVTLGNDTEIHSHSVLNGVAAGDD
                     CEIGPFSRLRPGTVLAGHVKTGNFVEVKNSHVAPHSKINHLSYVGDATVGTDVNVGAG
                     TITCNYDGANKHRTVIGDNAFIGSGVMLVAPVEVGAGATIGAGSTISKDAPAGELTLE
                     RSKQVTVAGWQRPKKKPK"
BASE COUNT          407 a          929 c          934 g          468 t
ORIGIN      
        1 cctcgagcgt gtcggccgtc tcgcccgatt gcgagagcgt gatgaacagc gtattcggcg
       61 gcacgacgac gctgcggtag cggtactcgc tcgcgatctc gacctggcat ggcacgccgg
      121 caatcgactc gagccagtag cgccccacgc aaccggcgtg atagctcgtg ccgcatgcga
      181 cgatatggat gttctcaacc ttcgacagca gctccgcggc gcgcgggccg agcgactcgg
      241 gcacgacgcg cttgttcacg acgcggccgt acaacgtatc cgcgagcgcg ctcggttgct
      301 cgaagatctc cttgagcatg aagtggcggt acggcccctt ctcggccgac tcttccgtcc
      361 attgcgtctc gtgcacgggc cgcgtgacgg gttggccctg cgggtcgaac accttcacgc
      421 cgacgcgcgt gatctcggcg atgtcgccct gctccaagta aatgaaccgc tgcgtgacag
      481 gcagcagcgc cggcacgccg ctcgcgacga agttctcgcc gatcccaagc ccgatcacga
      541 gcgggcttgc gatgcgcgtg acgacgatgc gctcggggtc cttggcgtcg aacgcgagca
      601 gcgcgtacgc gccttggaaa cgctgcacgg cgaggcgcag cgcgttgagc aggtcgtgcc
      661 cctgcttcaa gtagtcgtgg atcaggtgcg cggcaacctc ggtgtcggtc tccgacttga
      721 actcgtagcc cttcgcgatc agctcgtccc gaagcggctc gtagttttcg atgatgccgt
      781 tgtggatcac ggcgacgcga tcgcccgaga ggtgcggatg cgcgttggcc tccgtcacac
      841 cgccgtgtgt ggcccagcgc gtgtgcgcga caccgagccg gcccgtgagc ggtttgtcgt
      901 gcagcttggt ttcgaggtac gcgaccttgc cgaccgtgcg gcacagcccg agctggcgat
      961 tcgcttgcac gaccgcgatg ccggccgagt cgtagccgcg gtactcgagg cgcttcaagc
     1021 cctccacgag cacggggacg atgttgcgct ctgcgatggc tccgacgatg ccgcacatac
     1081 ctgtgtgtcc ttacttgggt ttcttcttgg gccgctgcca acccgcgacc gtgacctgct
     1141 tcgagcgctc gagcgtgagc tcgccggccg gcgcgtcctt cgagatcgtc gagcccgcgc
     1201 cgatcgtcgc gccggcgccg acctcgacgg gcgcgacgag catgacgccg gagccgatga
     1261 acgcgttgtc gccgatcacg gtgcgatgct tgttcgcgcc gtcgtagttg cacgtgatcg
     1321 tgccggcgcc gacgttgaca tcggtgccga ccgtcgcatc gccgacgtac gagagatggt
     1381 tgatcttgct gtgcggcgcc acgtggctgt tcttgacctc gacgaagttg ccggtcttca
     1441 cgtggcccgc gagcacggtg ccgggtcgca ggcgcgagaa cgggccgatc tcgcaatcgt
     1501 cgccggctgc aacaccgttg aggaccgagt gcgaatggat ctcggtgtcg ttgccgagcg
     1561 taacgtcggt caacaccgcg tacgggccga cgcggacgcg atcgccgagc acgaccttgc
     1621 cttcgagcac gacgccgacg tcgatgaaca cgtcgcggcc caccgtgact tcgccgcgca
     1681 cgtcgaggcg tgcgggatcc gcgagcgtga cgccgcgcgc catgagctcc gcagcttggc
     1741 gccgctgcca cgcgcgctcg gcttccgcga gctgagctcg atcgttgatg ccgagcactt
     1801 cggtcgccgc ttcggcgacg atgccgcgca cctcgacctt gtccgcgacc gccatcgcga
     1861 tcacgtcggt caggtagtac tcgcgctgcg cgttccggtt ctcgagcttg ccgagatagc
     1921 ggcgcagtgg accggcgtcg aacgcaatga gcccggtgtt gatctcgttg acgcgccgct
     1981 cggcctcggt cgcgtccttg tgctcgacga tccgcgtgac ggcgccgctg ccgtcgcgga
     2041 gcacgcggcc gtaacctgtg gcgtcggcga cgaccgcggt tagcaacgaa agcctgccgc
     2101 gcgcgtcgtc ggcgaccagg cgcgcgagcg tctcggcgcg gatcagcggc acgtcgccgc
     2161 acagcacgag cacgcggtgg tcgtccggga tcgccggcat ggcctggatc acggcgtggc
     2221 cggtgccgag ctgctcggat tggagcgccc actgtaagtc gggttgatcc gcaaacacgg
     2281 cgcggacttc atcggcgcca tggccgtaga cgatgtggat ggccgcgggc tcgagcgctc
     2341 gcgcggcccg gaccacgtgc tcgagcaggg gccggcccgc gagcggttgc agcaccttcg
     2401 gccgggccga atgcatgcgc tttccttggc ccgctgcgag aacgactacg gaaaccggca
     2461 ccgacctcga acctcgaaga tcctgctgaa cgggcaatga tagcgcgccg ccggaaacgg
     2521 cggcgcggca gcccgtcacg ccaggccgcg cgcgggttcc ggggactcgc gacgcgctgt
     2581 cggcccctcg acggaaggat ggccggactc gcctgaacct cgccgcgggg cgccgggact
     2641 caccccccaa acaaagtccg gcgggacagg ggattccgtt gctttcgatc ctggtcgctc
     2701 attcctactt tctgcgtttc gacgagaagc agcgccgg
//
LOCUS       DATCUD010000518         2326 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_12052, whole genome shotgun sequence.
ACCESSION   DATCUD010000518 DATCUD010000000
VERSION     DATCUD010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12052"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VIQ99_07575"
     CDS             complement(<1..833)
                     /locus_tag="VIQ99_07575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY9183044.1"
                     /translation="MPIEDELQDRRNDYDVTNTVQVSSAPRVRSAVADLFSALYPQNS
                     FDSVWLAFHDFERVFRGLDPNYHPVDTTYHDMQHTLDMTLALARLIAGHELSVEPADR
                     LGPDRAELAIVSALFHDVGYLRHRERDAGTVNGAVFTRIHVTRSGQYLEKYLPKIGLE
                     QFTPVISRIVHFTGYELNIDNIELEEPKDSMVGHLLGTADLVAQLADRCYLEKCRDRL
                     YPEFVLGGVAIDERPQGKVLYHSAEDLLGKTLSFYQTSARLRLERNFNRVYRYFEAFF
                     ER"
     gene            complement(903..1676)
                     /gene="xth"
                     /locus_tag="VIQ99_07580"
     CDS             complement(903..1676)
                     /gene="xth"
                     /locus_tag="VIQ99_07580"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017943052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY9183045.1"
                     /translation="MKVATWNVNSLRVRFPHVLKWLEQEQPDVLALQETKLKDEDFPA
                     DAFLERGYSAVFSGQPGYNGVAILARTAPAEVGYDFGNGYSDEHKRVLRATFGELRLW
                     SLYVPNGQSVESEKYSYKLEWLAELKAALAAELTRHRSVLVVGDFNIAPEDRDVHDPK
                     AWEGQVLCTPAERAALRALLDLGFQDVFRLFAQPEKTFSWWDYRGPAFRRNQGLRIDL
                     MLASSELSQKCVSCRIDKEPRGWERPSDHVPVVAEFRWP"
     gene            1760..>2326
                     /locus_tag="VIQ99_07585"
     CDS             1760..>2326
                     /locus_tag="VIQ99_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019561507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEY9183046.1"
                     /translation="MIQGNEPPAAVSFAEALRFWLRLGFIGFGGPAGQIAIMHTELVE
                     RRRWISEKRFLHALNYCMLLPGPEAQQLATYIGWLMHRTWGGIVAGGLFVLPSLFILI
                     ALSWIYVRFGDVPVVAGIFFGLKPAVTALVVHAAHRVGTRALKNAWMWAIAAAAFVAI
                     FAFDAPFPAIVLGAAIVGWLGARRWPHVF"
BASE COUNT          363 a          755 c          757 g          451 t
ORIGIN      
        1 cgctcgaaga acgcctcgaa gtagcggtac acgcggttga agttgcgctc gaggcgcagc
       61 cgcgccgagg tctgatagaa cgacagcgtc ttgccgagca ggtcttccgc ggagtgatac
      121 agcactttgc cttgcggccg ctcgtcgatc gcgacgccgc cgagcacgaa ctcgggatac
      181 agccggtcgc ggcatttttc gagataacag cgatccgcga gctgcgccac gaggtcggcc
      241 gtgccgagca ggtggcccac catgctgtcc ttcggttcct cgagctcgat gttgtcgatg
      301 ttcagctcgt agcccgtgaa gtgcacgatg cgtgagatca ccggcgtgaa ctgctcgagc
      361 ccgattttcg gcaaatactt ctcgaggtat tggccgctgc gcgtgacgtg gatgcgcgtg
      421 aagacggccc cgttcacggt gccggcgtcg cgctcgcgat gccgcaggta gccgacgtcg
      481 tggaacagcg cgctcacgat cgcgagctcg gcgcgatccg ggcccaagcg atcggcgggc
      541 tcgacgctga gctcgtgacc cgcgatcagg cgcgccagcg ccagcgtcat gtcgagcgtg
      601 tgctgcatgt cgtgatacgt ggtgtcgacc gggtgatagt tcgggtcgag accgcggaac
      661 acgcgctcga aatcgtggaa cgcgagccag acggaatcga acgagttctg cgggtacagc
      721 gcagaaaaca ggtcggctac ggcgctccga acccgcggcg cagagctcac ttgcaccgtg
      781 ttcgtgacgt cgtagtcgtt acgccggtcc tgtagctcgt cttcgatcgg catcgccttc
      841 atcctggccc gccagtctag aagattggcg tttcggtcag tatctcgaat ctcacataag
      901 ggtcacggcc agcggaattc tgcgacgacc ggcacgtggt cggaagggcg ctcccagccg
      961 cgtggctcct tgtctattcg gcaactgacg cacttttgac ttaactccga cgacgccagc
     1021 atgaggtcga ttcgaagccc ctgattgcgt ctgaaagccg ggcctcggta gtcccaccag
     1081 ctgaacgttt tctcgggctg cgcgaagagc ctgaacacgt cttggaaccc gaggtcgagc
     1141 agcgcgcgca acgcggcgcg ctcggccggc gtgcacagga cctggccttc ccaggccttc
     1201 gggtcatgaa cgtcgcggtc ctcgggcgcg atgttgaagt cgccgacgac gagcacggac
     1261 cgatggcgcg taagctcggc cgcgagcgcg gccttgagct cggccagcca ctcgagcttg
     1321 tagctatatt tttcggactc gacgctctgg ccattcggca cgtacaagct ccagagccgc
     1381 agctcgccga acgtcgcgcg caacacgcgt ttgtgctcgt cggagtaccc attcccgaag
     1441 tcgtagccca cctcggccgg cgccgtccgc gccaggattg cgacgccgtt gtagccgggc
     1501 tggccgctga acacggccga atagccgcgt tcgaggaacg cgtcggccgg gaagtcctcg
     1561 tccttgagct tcgtttcttg cagcgcgagc acgtccggct gttcctgctc gagccacttc
     1621 agcacgtgcg gaaaacgcac tcttaggctg ttcacgttcc acgtcgcgac tttcaaaccg
     1681 gtccccgact tgactgttac cgccgcgtca ccgcgcgtgc gctacgatcc gcggctcttc
     1741 gatttacgga tggtcgcgaa tgatacaggg caacgagccg ccggcggccg tgagtttcgc
     1801 cgaggcgttg cgcttttggc ttcggctcgg gttcatcggc ttcggcgggc ccgccgggca
     1861 gatcgcgatc atgcacacgg agctcgtcga gcgccgccgc tggatcagcg agaagcgttt
     1921 cttgcacgcg ctgaactact gcatgctgct gcccggcccc gaggcgcagc agctcgcgac
     1981 ctatatcggt tggctcatgc accggacatg gggtggcatc gtcgcgggcg ggctgttcgt
     2041 gctgccgtcg ctgttcattc tgatcgcgtt gtcgtggatc tacgtgcgct tcggcgacgt
     2101 gcccgtcgtc gccgggatct tcttcgggct caagccggcc gtgaccgcgc tcgtcgtgca
     2161 cgccgcgcat cgcgtcggca cgcgcgcgct caagaacgct tggatgtggg cgatcgcggc
     2221 ggccgcgttc gtcgcgatct tcgcgttcga cgctccgttc ccggccatcg tgctcggcgc
     2281 cgcgatcgtc ggttggctcg gcgcccgccg ctggccccac gtgttc
//
LOCUS       DATCUD010000519         3487 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_104347, whole genome shotgun sequence.
ACCESSION   DATCUD010000519 DATCUD010000000
VERSION     DATCUD010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3487)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3487)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3487
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104347"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VIQ99_07590"
     CDS             complement(<1..682)
                     /locus_tag="VIQ99_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008369221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY9183047.1"
                     /translation="MTAKTVKRAHPAIRDDIADLTTRRPVPGRDVEQIDPFLFLNHHG
                     PQVYAPHNRGLPFGPHPHRGFETVTFILTGELAHLDSAGHESVIKAGGIQWMTAGSGL
                     VHAEISPEDFKRQGGPLEILQLWVNLPPRLKMTQPRYVGLQRDDIPAIAAPDGKSVVH
                     LVSGEWQGKAGAMQPLLDIFLGTVELTAGGQVSFGGVTGRNVFLYVVRGSIEVAGQAV
                     PHWHLIELN"
     gene            800..1432
                     /locus_tag="VIQ99_07595"
     CDS             800..1432
                     /locus_tag="VIQ99_07595"
                     /inference="COORDINATES: protein motif:HMM:NF043005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCE4755 family polysaccharide monooxygenase-like
                     protein"
                     /protein_id="HEY9183048.1"
                     /translation="MARQQQTIRGCALKKWMLGLPVAAVAAAVTPAVNAHFKLLEPAS
                     WLAQDDRGDPQKLAPCGGTLGDPGEPTEAVTAVTGGSKLKIVVNETIFHPGHYRIALA
                     RKRNSLPLDPAVTMHETERGLRSQSAFIMTTPLPPILVDGLWPHTERPAANWETEITI
                     PNITCEGCQLQVIQVMLEHPGVREGGFSYHHCAVLNITADPAKPNEDARW"
     gene            1476..2138
                     /locus_tag="VIQ99_07600"
     CDS             1476..2138
                     /locus_tag="VIQ99_07600"
                     /inference="COORDINATES: protein motif:HMM:NF036807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfotransferase"
                     /protein_id="HEY9183049.1"
                     /translation="MTLQVLGVGFGRTGTLSLKAALETLGIGPCYHMVEVAARPKDAP
                     IWAAAARGEAVDWRALLAGFAAVADWPATAFWRELLAAFPTARVVLTVRDSTAWHASF
                     RDTVLDKASGPPPPQDSALRAVYDLTRELILDGVFGGRAADVVAAISTYEAHNRAVIE
                     SVPPERLLVFDPATGWEPLCRFLARPVPPVPFPHLNTRAGFLREYLGPRAAARLAGVT
                     RS"
     gene            complement(2125..2835)
                     /locus_tag="VIQ99_07605"
     CDS             complement(2125..2835)
                     /locus_tag="VIQ99_07605"
                     /inference="COORDINATES: protein motif:HMM:NF013786.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HEY9183050.1"
                     /translation="MTGAARAIHIHYTDRRALPDEVVDAFVTAEDRQRVSAEMHARRR
                     SEFLAGRALLRHALACHTGRHASSLRIRVTTDGKPECVDGPAISVAHSSDLVCCAIAE
                     RGSIGVDVETGRRRLGVAALAQRYFTSAEARWVDAEPEQRFRMLWVLKEAYLKALGVG
                     LAGGLGTLECRIEPPVIEPRVARGGDAPRLSLWAGADCHLAVASLGVPPSELAIKRWA
                     PAGEPDAFGPLAMVARTE"
     gene            complement(2832..>3487)
                     /locus_tag="VIQ99_07610"
     CDS             complement(2832..>3487)
                     /locus_tag="VIQ99_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005893787.1"
                     /note="FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes
                     a condensation reaction in fatty acid biosynthesis:
                     addition of an acyl acceptor of two carbons from
                     malonyl-ACP; required for the elongation of short-chain
                     unsaturated acyl-ACP; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY9183051.1"
                     /translation="DELSPIQAAVFDTLFATSLKNEAPSTTPRPWDRDRDGLVIGEGA
                     ATLLLEDWDSAVARGARIYAEIVGFGTNCDARHVTQPTSETMEGAMRRALGDSGLPAE
                     AIGYVSGHGTATELGDIAESHATSAVFGERIPISCMKSYFGHTLGACGAQEAWLAIEM
                     MNRDHFAPTLNLEHVDPRCASLDYIVGGPRALQTEFVMSNNFAFGGINTSLIFRRVP"
BASE COUNT          559 a         1231 c         1141 g          556 t
ORIGIN      
        1 cgttgagctc gatcaggtgc caatgcggca cagcctggcc cgcgacctcg atcgacccac
       61 gcacgacgta cagaaacacg ttgcgccccg tgacgcctcc gaacgacacc tgcccccctg
      121 ccgtaagctc cacggtgccg agaaagatgt cgagcagcgg ctgcatcgcg ccggccttgc
      181 cttgccactc acccgagacg aggtggacga cgctcttgcc gtcgggcgct gcgatcgcgg
      241 gaatgtcgtc gcgctgcagg cccacgtagc gcggctgtgt catcttcagg cgcggcggca
      301 agttgaccca gagctgcaag atctcgagcg gcccgccctg ccgcttgaag tcctcgggcg
      361 agatctcggc atgcacgagg ccgctgcccg ccgtcatcca ttgaatgccg cccgctttga
      421 tcacgctctc gtgccccgcg ctgtccaaat gcgcgagctc gcccgtgaga atgaacgtga
      481 cggtctcgaa cccgcggtgc ggatgtgggc caaatggcaa gccgcgattg tgcggagcgt
      541 aaacctgcgg gccatgatgg ttcaggaaca ggaacgggtc gatctgctcc acgtcgcggc
      601 ccggcactgg gcgtcgcgtc gtcaagtctg cgatgtcgtc gcggatcgcg ggatgcgcac
      661 gcttcacggt cttcgcggtc atgggctgca ctccgttgcg ggcctggagt cggcggtgcg
      721 caagcataca ggtgtctccg cgcgtcgaac acgcagcggc gacaattctt cagcgcaccg
      781 gccgtgcagc gcggctagaa tggcccgcca acaacaaacc atccgggggt gcgccttgaa
      841 gaaatggatg ctcggtttgc cggtcgccgc ggtcgcggct gcagttaccc cggccgtcaa
      901 cgcccacttc aagctgctcg agcccgcgtc gtggcttgca caggacgacc gaggcgatcc
      961 tcagaagctc gccccgtgtg gcggcacgct cggcgacccc ggcgagccga ccgaggccgt
     1021 cacggccgtg accggcggca gcaagctcaa gatcgtcgtc aacgaaacta tctttcaccc
     1081 cggccactat cgaatcgcgc tggcgcgcaa gcgcaatagc ttgccgctcg atcccgccgt
     1141 gacgatgcac gagaccgagc gcgggctgcg ctcacagtcc gcgttcatca tgacgacgcc
     1201 gctgccgccg atcctggtcg acggcttgtg gccgcacacc gagagaccgg ccgcgaactg
     1261 ggaaaccgag atcacgattc cgaacatcac ctgcgaaggc tgccagctcc aagtgattca
     1321 agtgatgctc gagcatcccg gcgtccgcga gggcggcttt tcctaccatc actgcgcggt
     1381 gttgaacatc acggccgatc cggcgaagcc gaacgaggac gcgcgctggt agcggcgaag
     1441 cacgggtcca ccgcgatcgt cgcggccagg gcggcatgac gctgcaagtc ctgggcgtgg
     1501 gcttcggtcg cacgggaacg ctgtcgttga aggcggcgct cgagacactc ggcatcgggc
     1561 cctgctacca catggtcgag gtcgctgcac gcccgaagga cgcgccgatc tgggccgcag
     1621 cagcgcgtgg cgaggccgtg gactggcgcg cgctgctcgc gggcttcgcc gccgtggccg
     1681 actggcccgc gacggctttc tggcgtgagc tgctcgcggc gttcccgacc gcccgcgtcg
     1741 tactaaccgt ccgcgacagt accgcatggc acgcgagctt ccgcgacacg gtcctcgaca
     1801 aggcgtccgg acccccgccg ccgcaagact cggcgctgcg cgccgtctac gacctgaccc
     1861 gggagctgat cttggacggc gtgttcggcg gccgggccgc ggacgtcgtt gcagcgatca
     1921 gcacttacga agcccacaac cgcgcggtca tcgagtccgt cccacccgaa cgcttgctcg
     1981 tcttcgatcc tgcgacgggt tgggaaccgc tgtgccggtt cctcgcgcga cccgtgccac
     2041 ccgtcccgtt cccgcatttg aatacgcgtg cgggcttctt gcgggagtac ttgggcccgc
     2101 gcgcagctgc gcgactcgcc ggcgtcactc ggtcctagcg accatggcca gcggcccgaa
     2161 cgcgtcgggc tcgccggccg gcgcccaacg cttgatcgcg agctcggagg gaggcacgcc
     2221 caggctcgcg actgctagat gacagtcggc tccggcccac agcgatagac gcggtgcatc
     2281 gccgccgcgc gcgacgcgcg gctcgatcac cggcggctcg attcgacatt cgagcgttcc
     2341 gagcccaccc gcgaggccga cgccgagcgc cttcaggtag gcctccttga gcacccacag
     2401 catccggaac cgctgctcag gctcggcgtc gacccagcgc gcctcggccg aagtgaagta
     2461 gcgttgtgcc aacgcggcta cgcccaagcg ccgccgaccc gtctcgacgt cgactccgat
     2521 gctacctcgt tcggcgatgg cgcagcacac gaggtcgctg ctgtgcgcca cgctgatcgc
     2581 gggcccgtcg acgcactccg gcttgccgtc ggtcgtgacg cggatcctca gcgacgacgc
     2641 gtgccgtccc gtgtggcacg caagcgcgtg ccgcagcaac gcacggccgg ccagaaattc
     2701 cgagcgccgc cgcgcatgca tctcggccga cacgcgttgc cgatcctcgg cagtaacgaa
     2761 ggcatcgacg acctcgtccg gcaacgcgcg ccggtctgtg taatggatgt gaattgcgcg
     2821 cgcggcgccg gtcacggcac gcggcggaaa atcagcgagg tgttgatgcc gccgaatgcg
     2881 aagttgttgc tcatcacgaa ctctgtctgc agcgcgcgcg gcccgccgac gatgtaatcg
     2941 aggctcgcgc accggggatc gacgtgctcg agattcagcg tgggcgcgaa gtggtcgcgg
     3001 ttcatcatct cgatcgccag ccacgcctcc tgggccccgc acgcgccgag cgtgtgaccg
     3061 aagtagctct tcatgcaact gatcggaatg cgctcgccga acacggcgct tgtcgcatgg
     3121 ctctcggcga tgtcgccgag ctccgtggcc gtgccgtgcc cgctcacgta accgatcgcc
     3181 tcggccggaa ggcccgagtc gccgagcgcg cggcgcattg caccctccat ggtttccgac
     3241 gtcggctgcg tgacgtggcg ggcatcacag ttcgtgccga agccgacgat ctcggcgtaa
     3301 atcctcgctc cccgcgcgac ggccgagtcc caatcctcga gcagcagcgt cgcggctccc
     3361 tctccgatca cgaggccgtc gcgatcgcga tcccacggcc gcggcgtcgt gctcggcgcc
     3421 tcgtttttca agctggtagc gaacaacgtg tcgaaaaccg cggcttggat cggcgagagc
     3481 tcgtcgg
//
LOCUS       DATCUD010000520         3613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_12055, whole genome shotgun sequence.
ACCESSION   DATCUD010000520 DATCUD010000000
VERSION     DATCUD010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12055"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..992)
                     /locus_tag="VIQ99_07615"
     CDS             complement(<1..992)
                     /locus_tag="VIQ99_07615"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012982124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY9183052.1"
                     /translation="MAEIQNFTLNFGPQHPAAHGVLRLVLELDGEVIQKADPHVGLLH
                     RATEKLAESKPFNQSIGYMDRLDYVSMMCNEHGYVLAIERLLGLTPPIRAQYIRVMFD
                     EITRILNHLMWLGAHGLDIGAMAMFLYCFREREDLMDCYEAVSGTRMHATYYRPGGVY
                     RDLPASMPKYQPSPYRDAKDLDRLNAARSGSLLDFIEDFTRRFPAHVDEYETLLTDNR
                     IWKQRTVNIGVVSPERAMQLGFSGPMLRGSGIAWDLRKKQPYEVYASLDFDIPVGVNG
                     DCYDRYLVRVEEMRQSNRIIKQCVEWLKANPGPVMLEDRKVSPPRRIEMKDDMES"
     gene            complement(985..1716)
                     /locus_tag="VIQ99_07620"
     CDS             complement(985..1716)
                     /locus_tag="VIQ99_07620"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY9183053.1"
                     /translation="MQQKDLTPRYAALAGAIEGKLGGILERLPTSTGELGFNVNPSDL
                     LHACQTLRDDPELKFEMLMDVCGVDYRAYGLDEWQTNSATGTGFSRGTLRGPALAETD
                     DVEPVTYRPAARFAVVHHLMSVSHNWRLRLKTFCASDDRPIIDSVYGIWASADWFERE
                     AFDLYGILFRGHPDLRRLLTDYGFIGHPFRKDFPLIGNVEMRYDPVKGRVVYEPVTIE
                     PRTLVPKVIRDDARYAPDLKDPANG"
     gene            complement(1716..2174)
                     /locus_tag="VIQ99_07625"
     CDS             complement(1716..2174)
                     /locus_tag="VIQ99_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008435613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HEY9183054.1"
                     /translation="MDKGFVVTKVDALMNWARTGSLWPVTFGLACCAVEMMHAGASRY
                     DLDRFGVIFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPEPRWVISMGSCANGGGY
                     YHYSYSVVRGCDRIVPVDVYVPGCPPTAEALLFGILQLQQKIRRTQTIAR"
     gene            complement(2210..2566)
                     /locus_tag="VIQ99_07630"
     CDS             complement(2210..2566)
                     /locus_tag="VIQ99_07630"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012982121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY9183055.1"
                     /translation="MLANYAPILIFLLIAGGISVVLLAAGFLLGSGRKDAAKLSPYEC
                     GFDAFEDSRMRFDVRYYLVAILFIIFDLEIAFLFPWAVSLDAIGTFGLAAMGIFLAVL
                     VVGFVYEWRKGALEWD"
     gene            complement(2647..2731)
                     /locus_tag="VIQ99_07635"
     tRNA            complement(2647..2731)
                     /locus_tag="VIQ99_07635"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2695..2697),aa:Leu,seq:gag)
     gene            complement(2742..3143)
                     /gene="secG"
                     /locus_tag="VIQ99_07640"
     CDS             complement(2742..3143)
                     /gene="secG"
                     /locus_tag="VIQ99_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005220207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEY9183056.1"
                     /translation="MLQTIVLIAHVGIALMIIGLVLLQRGKGADAGTGFGAGASGTVF
                     GARGSATFFSRATGVLATLFFISSLALAYLATQRTAPTSLLETAPASASQSAEPPAQA
                     PPSELPPLPESAPESAAPDGVNGDNGDNGDN"
     gene            complement(3159..>3613)
                     /locus_tag="VIQ99_07645"
     CDS             complement(3159..>3613)
                     /locus_tag="VIQ99_07645"
                     /EC_number="5.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017640624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEY9183057.1"
                     /translation="LYGETDAVVAAKFLAALEVGLIPILCVGETLEEREARQTNAVIR
                     RQVEAVLDAAGAAAFGKAIVAYEPVWAIGTGRTATPEQAQEVHAFIRGIVAGRDATIA
                     TGLSILYGGSVKGANAGNLFAMDDIDGGLVGGASLVAAEFLEIFRAAG"
BASE COUNT          692 a         1191 c         1113 g          617 t
ORIGIN      
        1 gactccatgt cgtccttcat ctcgatgcgg cgtggcggcg aaaccttgcg gtcctcgagc
       61 atcaccgggc ccgggttggc cttcagccat tccacgcact gcttgatgat gcgattcgac
      121 tgccgcatct cctcgacgcg cacgagatag cggtcgtagc agtcgccgtt gacgcccacg
      181 ggaatgtcga aatcgagcga ggcatagacc tcgtacggct gcttcttgcg gaggtcccag
      241 gcgataccgg aaccgcgcag catcgggccc gagaaaccga gctgcatcgc ccgttccggc
      301 gacacgacgc cgatattcac cgtgcgttgc ttccaaatgc ggttgtcggt caacagcgtc
      361 tcgtactcgt cgacgtgcgc cggaaagcgc cgagtgaaat cctcgatgaa gtcgagcagc
      421 gacccgctcc gcgcggcgtt caggcgatcg agatccttcg cgtcgcgata cggcgagggc
      481 tggtatttcg gcatgctcgc cggcaagtcg cggtatacgc cgccggggcg gtagtacgtg
      541 gcatgcatgc gcgtgcccga gaccgcttcg tagcagtcca tcaggtcctc gcgctcgcgg
      601 aagcaataca ggaacatcgc catggcgccg atgtcgagac cgtgcgcgcc aagccacatc
      661 aagtggttca ggatccgcgt gatctcgtcg aacatcacgc ggatgtactg cgcccggatc
      721 ggcggtgtga gcccgagcaa gcgctcgatt gcgagcacgt agccgtgctc gttgcacatc
      781 atcgacacgt agtcgagccg gtccatgtag ccgatcgatt gattgaacgg cttgctctcg
      841 gccagcttct ccgtggcgcg atgcagcaga cccacgtgcg gatcggcctt ttggatcacc
      901 tcgccgtcga gctcgagcac gaggcgcagc acgccgtgcg cggccggatg ctgcgggccg
      961 aaattcagcg tgaagttctg gatctcagcc attggccgga tccttgaggt cgggcgcgta
     1021 gcgcgcgtcg tcgcggatga ccttcggcac gagcgtgcgc ggctcgatcg tcacaggctc
     1081 gtacacgaca cggcctttga cggggtcgta acgcatttcg acgttgccga tcaacgggaa
     1141 atccttgcgg aagggatggc cgatgaaacc gtagtccgtc aacaggcgcc gcagatcggg
     1201 atggccgcgg aacaggatgc cgtacagatc gaacgcctcg cgttcgaacc agtccgcgga
     1261 ggcccaaatg ccatacacgg aatcgatgat gggccggtcg tcgctcgcgc aaaacgtctt
     1321 caggcgtaga cgccagttgt gcgacaccga catcagatga tggacgaccg cgaaacgcgc
     1381 cgccggccgg tacgtcaccg gctctacatc gtccgtttcc gcgagggcgg gcccgcgcaa
     1441 cgtgccgcgg ctgaaccccg tgccggtcgc actgttcgtc tgccactcgt cgagcccgta
     1501 agcacggtag tcgacgccgc aaacgtccat cagcatttcg aacttgagct cggggtcgtc
     1561 acgcagcgtt tggcatgcat gcagcaagtc gctcgggttc acgttgaacc caagctcgcc
     1621 ggtcgacgtc ggcaggcgtt ccaaaatgcc gccgagcttc ccttcgatcg cgcccgcgag
     1681 agcggcgtac cgcggagtta gatccttctg ctgcattacc gcgcgatagt ctgggtgcgc
     1741 cggatcttct gctgcagctg aaggattccg aacagcaaag cctccgccgt gggcggacag
     1801 ccgggaacgt acacgtcgac gggcacgata cgatcgcaac cgcggacgac cgaataagag
     1861 tagtgatagt agccgccgcc gttcgcgcac gagcccatcg agatcaccca gcgcggctcg
     1921 ggcatctggt catagacctt gcgcagcgcg ggggccatct tgttgacgag cgtgccggca
     1981 acgatcatca cgtcggactg ccgcgggctc ggacggaaga tcacgccgaa tcgatcgaga
     2041 tcgtagcggg acgcgccggc atgcatcatc tcgacggcac aacaggcgag cccgaacgtc
     2101 acgggccata gcgagcccgt gcgggcccag ttcatcaacg catccacctt cgtgacgacg
     2161 aagcctttgt ccatcacttg cggaacgtcg atcggcagct gtggcgcgct caatcccact
     2221 cgagcgctcc cttacgccac tcgtagacga agcccacgac cagcacggcc aagaaaatac
     2281 ccatcgccgc tagaccgaac gtgccgatcg cgtcgagcga cacggcccag ggaaacagga
     2341 aggcgatctc gagatcgaag atgatgaaca gaatcgcgac gaggtagtaa cggacgtcga
     2401 aacgcattcg cgagtcttcg aaggcgtcga acccgcactc gtaaggcgac agcttcgccg
     2461 cgtctttgcg gccgctgccg agcaagaacc cggccgccaa caggacgacg ctgatcccgc
     2521 cggcaatgag cagaaagatc agaatcggtg cgtagttggc cagcatagtc cctgccgcgc
     2581 gaaatcggcg cgaattgtag cagccgcctc gtctcgtagc accgattttt ccgagcgagt
     2641 ttttggtggt gcccacggtc ggactcgaac cgacacagct ttcgccacta ccccctcaag
     2701 atagcgtgtc taccaattcc accacgtggg cgtctgtaac ttcagttgtc gccgttgtcg
     2761 ccgttgtcgc cgttgacccc atccggagcc gcggactccg gcgccgactc gggcagcggc
     2821 ggcaactcgc tcggcggcgc ttgtgccggc ggctccgcgc tctgcgacgc ggatgcgggc
     2881 gcggtctcga gcaagctcgt cggcgccgtg cgctgggtag cgagatacgc cagcgcgagg
     2941 ctcgagatga aaaacaacgt cgcgagcaca ccggtcgccc gcgagaagaa cgtggccgac
     3001 ccgcgcgcgc cgaaaaccgt gcccgatgct ccggcaccga agccggttcc cgcatccgca
     3061 cccttgcctc gctgcaatag cacgaggccg atgatcatga gcgcgatgcc cacatgggca
     3121 atcaaaacga tcgtttgcaa cattgcgttc gctgtccgtt agccagccgc gcggaaaatc
     3181 tcgaggaact cggcggcgac cagtgaagcg ccgcccacca acccgccgtc gatatcgtcc
     3241 atcgcgaaca gattgccggc gttggcgccc ttgacgctgc cgccgtagag aatgctcaaa
     3301 ccggttgcga ttgtagcatc tcgacccgcg acgatgcctc ggatgaacgc atggacctct
     3361 tgcgcctgtt ccggtgtcgc cgtacgcccc gtaccgatcg cccagacggg ctcgtacgcg
     3421 acgatcgcct tcccgaatgc cgccgcgccc gcggcatcca gcaccgcctc gacctgtcgc
     3481 cggatcacag cgttcgtctg ccttgcttcg cgctcctcga gcgtctcacc gacgcacagg
     3541 atcggtatca gcccgacctc gagcgcagcg aggaacttcg ccgcgaccac ggcatcggtc
     3601 tcgccgtaaa ggg
//
LOCUS       DATCUD010000521         1711 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_83211, whole genome shotgun sequence.
ACCESSION   DATCUD010000521 DATCUD010000000
VERSION     DATCUD010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1711
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83211"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VIQ99_07650"
     CDS             <1..423
                     /locus_tag="VIQ99_07650"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY9183058.1"
                     /translation="FFTKIAKTMPQNLLVILARHHGAPIAAAICFRSSTTLYGRYWGS
                     LADFHSLHFETCYHQGIEYCIRERLERFEPGTQGEHKVARGFTPRPTWSCHWLRDADF
                     RAAVGAFLAREAEHVDAYIDEIGEHVPYRTVPFDAARA"
     gene            443..1135
                     /gene="aat"
                     /locus_tag="VIQ99_07655"
     CDS             443..1135
                     /gene="aat"
                     /locus_tag="VIQ99_07655"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY9183059.1"
                     /translation="MGSLHWLSRTHRAEQFPPPSEALTEPNGLLAAGGDLTPERLLAA
                     YTQGIFPWYQEGQPILWWSPDPRAVLTPSELKISRSLRRSVAKRGFEFRVDTAFERVI
                     AACAEPRHYGGGTWITDEMAAAYTNMHRLGWAHSFETWHAGALVGGLYGIAIGRVFFG
                     ESMFTRVTDASKVALVHTVDLLRERGFELIDCQVASAHTTSLGATEIPRAEFLRRLDR
                     LCDPPGTPRIWR"
     gene            1222..1440
                     /gene="infA"
                     /locus_tag="VIQ99_07660"
     CDS             1222..1440
                     /gene="infA"
                     /locus_tag="VIQ99_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEY9183060.1"
                     /translation="MAKEEAIQMEGTVVETLPNTTFRVELQNGHVVTAHISGKMRKHY
                     IRILKGDAVTVELTPYDLTKGRITYRAR"
     gene            complement(1445..>1711)
                     /locus_tag="VIQ99_07665"
     CDS             complement(1445..>1711)
                     /locus_tag="VIQ99_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183061.1"
                     /translation="RDWVAVRGYDKKMGARPMARVIQEHIKRPLAEELLFGKLTEGGH
                     VRVEVAEGGESLILTVEPLTRELADLRGKNTDQRALASDRDNDR"
BASE COUNT          293 a          570 c          544 g          304 t
ORIGIN      
        1 ttcttcacca agatcgcgaa gaccatgccg caaaacctgt tggtgatcct cgcgcgccac
       61 cacggcgcgc cgatcgcggc cgcgatctgc ttccgcagca gcacgacgct gtacggacgc
      121 tattggggaa gcctcgccga ctttcacagt ctgcacttcg agacgtgcta ccaccaaggc
      181 atcgagtact gcatccgcga gcggctcgag cgcttcgagc ccggcacgca aggcgagcac
      241 aaggtcgcgc gtgggttcac gccgcgaccg acgtggtcgt gccattggct acgcgacgcc
      301 gattttcgcg cggccgtcgg cgctttcctc gcgcgcgagg cggagcacgt cgatgcttat
      361 atcgacgaga tcggcgagca cgttccgtac cgcaccgtcc cattcgacgc cgcacgagcc
      421 tgagacggcc gagggcctcg acatgggatc gctgcactgg ctctcgcgaa cgcatcgtgc
      481 ggagcagttt ccgccgccga gcgaggcgct gacggagccg aacggcttgc tcgctgcggg
      541 cggcgacctg actccggagc ggttgttggc cgcgtacacg caggggatct ttccgtggta
      601 tcaggaaggt cagccgatcc tctggtggag ccccgatcca cgcgcagtgc tcacgccgag
      661 cgagctcaag atctcgcgga gcctgcgccg ctcggtagcg aaacgcggtt tcgagtttcg
      721 cgtcgacact gcgttcgaac gcgtcattgc cgcgtgcgcc gagccacgcc actatggcgg
      781 cggcacgtgg atcacggacg agatggccgc ggcctatacg aacatgcacc ggctcggctg
      841 ggcgcactcg ttcgaaacct ggcacgccgg cgccctcgtg ggcgggttgt acggtatcgc
      901 gatcgggcga gtcttttttg gcgagtcgat gttcacgcgt gtcacggacg cgtcgaaagt
      961 cgcgctcgtg cacaccgtcg atctcctgcg cgaacgtggc ttcgagctca tcgattgcca
     1021 ggtggcctcg gcgcacacga cgagtctcgg cgccacggaa ataccgcgcg ccgagttcct
     1081 acgccgcctc gacagactgt gcgatccgcc gggcacgccg cggatctggc gttgagtttc
     1141 gcgcgcccgg aacgacgttt gccgccctcg ctcggcttgt gcaacaatgc gccgcccgcg
     1201 cgggctccca actgttgcga aatggcaaaa gaagaagcga ttcaaatgga aggtacggtg
     1261 gtggaaacac tgccgaacac gacctttcgt gtcgagctcc agaacggcca cgtcgtgacc
     1321 gcgcacatct cgggcaagat gcgtaagcac tacatccgca ttttgaaggg cgacgccgtt
     1381 accgtggagc tcacgcccta cgatctgacg aagggccgca tcacctatcg cgcgcgttag
     1441 ttagctagcg atcgttgtcg cgatcactcg cgagcgcgcg ttggtccgtg ttcttaccgc
     1501 gcaagtcggc gagctcgcgc gtcaacggct cgacggtcag gatcaagctc tctccgccct
     1561 ccgcaacctc gacacgcacg tggccgcctt ccgtgagctt gccgaacagg agctcctcgg
     1621 cgagcgggcg cttgatgtgc tcctgaatga cgcgggccat cggccgggcg cccattttct
     1681 tgtcgtagcc gcgcacagcg acccaatcgc g
//
LOCUS       DATCUD010000522         1623 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97641, whole genome shotgun sequence.
ACCESSION   DATCUD010000522 DATCUD010000000
VERSION     DATCUD010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97641"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1018
                     /locus_tag="VIQ99_07670"
     CDS             <1..1018
                     /locus_tag="VIQ99_07670"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HEY9183062.1"
                     /translation="EADQAAVARSMVEAASALLATVAGGPSGVEMTVGFDRGANLALT
                     LDNPARESWAYWPTERVGVPLDLMSGEQRRLTQGLLATLLSSRGHLKVAQIMQLEQIL
                     GMLDTAGLPRGVGHYEIVLFGTPSATEPWGWRFEGHHVSLNVAVGEAGISVTPSFFGS
                     NPGEVRSGPLTGLRVLGAEEDLARDLVESLTAAQRGRAVVSAEAPRDIFTGNIGKPRE
                     QWEAWRTALQPEGIPVRELNEVQQHWVRRILDEVVGVYRPELSAAFLAAIDARTLSFA
                     WMGQTERGAPHYFRLQGESFVFEYDNVQDGGNHVHSVWRDKTGDFGMRVLGEHYRTSH
                     VTTQ"
     gene            1029..>1623
                     /locus_tag="VIQ99_07675"
     CDS             1029..>1623
                     /locus_tag="VIQ99_07675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183063.1"
                     /translation="MLSSLLLAGFVAGQGQALQLSYPTEPGLTGISVRWSGYAVPFVQ
                     RADRWLATVGVDLDSRPGDHAVDVTFTYSDGRIRAHREPIVVIAEQYPTTELTVEERY
                     VELSPEDQARADREGAETRAIYDTFTPERFWTEPFQVPVDGAADGRNFGHRRIFNGQP
                     RAPHSGADLRARTGTPIRAANRGRVVLAKDLFYSGNAV"
BASE COUNT          267 a          536 c          566 g          254 t
ORIGIN      
        1 agaggcggac caagccgccg tggccaggtc gatggtcgag gccgcttccg cgttgctcgc
       61 gaccgtggcc ggagggccga gcggcgtgga aatgaccgtc ggcttcgacc gtggcgcgaa
      121 cctcgcgctt acgctcgaca atccggcccg cgagagctgg gcctactggc cgacggaacg
      181 cgtcggtgtg ccactcgacc tcatgagcgg cgagcagcgg cgcttgacgc aggggctgct
      241 ggcgacgctg ttgagctcgc gcggccacct caaggtagcg cagatcatgc agctcgagca
      301 gattctcggc atgctcgaca ccgcgggact gccgcgcggg gtcggccact atgagatcgt
      361 gctgttcggc acgccgtcgg cgacggagcc gtggggctgg cggttcgagg gtcaccacgt
      421 atcgttgaac gtcgcagtcg gggaagccgg catcagcgtg accccgtcgt tcttcggctc
      481 gaacccaggc gaggtgcgca gcggtccgct gaccgggttg cgcgtgctcg gcgccgaaga
      541 ggatctcgcg cgcgatctcg tggaatcgct gaccgccgcg caacgcggca gggccgtcgt
      601 gtccgccgaa gcgccgcgcg acatcttcac cggcaacatc ggcaagccgc gcgagcaatg
      661 ggaagcgtgg cggacggcgt tgcagccgga agggatcccg gtccgcgagc tcaacgaggt
      721 gcagcagcat tgggtccgcc ggattctcga cgaggtcgtc ggcgtctatc ggcccgagct
      781 gtccgccgcg ttcctggccg ctatcgacgc caggacgctg agcttcgcct ggatgggaca
      841 gaccgaacgc ggtgcgccgc attacttccg cttgcagggc gaaagcttcg tgttcgagta
      901 cgacaacgtg caggacggcg gcaaccacgt gcactcggta tggcgcgaca agaccgggga
      961 cttcggcatg cgcgtgctcg gcgagcacta ccggacgtcg cacgtcacca cgcagtaagg
     1021 agcaaggaat gctctcgtcg ctgctgctcg cgggatttgt tgccggccaa ggccaggcct
     1081 tgcagctgag ttatcccacg gagcccgggt tgaccggaat ctccgtgcgt tggagcggct
     1141 atgccgtgcc gttcgtgcag cgtgccgatc gctggctcgc aacggtcggc gtcgatctcg
     1201 attctcgacc cggcgaccac gcagtcgacg tcacgttcac gtactcggac ggccgcatac
     1261 gcgcgcatcg cgagcccatc gtcgtgatcg ccgagcagta tccgaccacg gagctcacgg
     1321 tcgaagaacg ctacgtcgag ctgagccccg aggaccaggc gcgtgccgat cgggaaggcg
     1381 cggagacgcg cgcgatctac gacaccttca cgcccgaacg cttctggacc gagccctttc
     1441 aggtgccggt cgacggcgcg gcggacgggc gaaacttcgg ccatcgccgc attttcaacg
     1501 gccaaccccg cgcaccgcac tcgggcgcgg acctgcgagc tcggaccgga acgccgattc
     1561 gcgccgcgaa tcggggccgc gtcgtcctgg cgaaagatct gttctacagc ggcaacgccg
     1621 tgt
//
LOCUS       DATCUD010000523         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_47709, whole genome shotgun sequence.
ACCESSION   DATCUD010000523 DATCUD010000000
VERSION     DATCUD010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47709"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VIQ99_07680"
     CDS             <1..910
                     /locus_tag="VIQ99_07680"
                     /inference="COORDINATES: protein motif:HMM:NF015722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HEY9183064.1"
                     /translation="PIVAMVLALAALSSAQSQTESRSRGGPKPGQTFQECRNCPEMTV
                     LPAGKVLVGSPADEPLRRESEVQKEITFARPFAMSKTAVTWNQWEACARDRWCDGMAI
                     DAALRLGMNGQPNPDYRDYGRGTRPVVGVSWYDAQAFVGWLNWKTGEDDAYRLPSESE
                     WEYGARAGTTTAFPWGPELDHNYGNFGQADGGLGGKAEGRDVWVNETAPVASFPPNAF
                     GLYDMHGNIFEWTEDCYEADRAHTPADGSANKEGNCANRVFRNGTFMSNPYMQRSARR
                     GAPYPATQRGRNYLGFRVAKTLPGAP"
     gene            907..>1665
                     /locus_tag="VIQ99_07685"
     CDS             907..>1665
                     /locus_tag="VIQ99_07685"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY9183065.1"
                     /translation="MNLRQFDLNLLVALDVLLTERNVTRAGERLFLSQPAVSGILARL
                     RHAFQDELLVRVGRNLELTAFAADLASPVHDCVRQVEDLLNLRRPFEPESARWSFRIA
                     ASDYVVFLVLGALLKSLTERAPNISVRFMALEPSAGERLAAGELDFAVLPAELEPNLP
                     SVPLFEDSWVCAVWSGHPHTREQFTLEEFLAIPHLSFRLAGPDHGSIAESYLAQLGFE
                     LKIVASTESFATAPFLLRDTPFVTLVPRRLGERLQ"
BASE COUNT          257 a          546 c          585 g          277 t
ORIGIN      
        1 gccgatcgtc gcgatggttc tggcgttggc cgccctatcg tcggcgcaga gtcaaacgga
       61 aagcagatcg cgcggcggcc cgaagccggg ccagacgttt caggagtgcc gcaactgccc
      121 cgagatgacc gtgctgccgg ccggcaaggt ccttgtcggc tcgccggcgg atgaaccgct
      181 gcgtcgcgag agcgaggtgc agaaggagat tacgttcgcg cggccgttcg cgatgtcgaa
      241 gacggccgtg acttggaacc agtgggaagc gtgcgcgcgc gaccggtggt gcgacggcat
      301 ggcgatcgac gcggcgctgc gtctcgggat gaacggccag ccgaatcccg attaccgtga
      361 ctatgggcgc ggcacgcggc ccgtcgtcgg cgtgagctgg tacgacgcgc aggcgttcgt
      421 cggctggctg aactggaaga cgggcgagga cgatgcgtat cgtctgccgt ccgagtcgga
      481 atgggagtac ggggcgcgcg ccggtacgac gacggcattc ccctggggcc cggagctcga
      541 ccacaactac ggcaacttcg gccaggccga cggcggcctc ggcggcaagg ccgaaggccg
      601 tgacgtctgg gtcaacgaga cggcgcccgt cgcgtcgttc ccgccgaacg cgttcgggct
      661 ttacgacatg cacggcaaca tcttcgagtg gaccgaggat tgctacgaag ccgatcgcgc
      721 gcatacgccc gccgacggct ccgcgaacaa ggaaggcaac tgcgcgaacc gcgtgttccg
      781 caacggcacg ttcatgagca acccgtacat gcagcgctcg gcgcggcgcg gcgcgccgta
      841 cccggcgacg cagcgcgggc gcaactactt gggtttccgg gtggcgaaga cgctgcccgg
      901 agccccatga acctccgcca gttcgacctc aatctgctcg tcgcgctcga cgtgctcctg
      961 accgagcgca acgtgacgcg cgccggcgag cgcttgttcc tgagccagcc ggccgtcagc
     1021 gggattctgg cgcggctgcg gcacgcgttt caggacgagc tgctcgtgcg tgtcggccgc
     1081 aacctcgagc tgaccgcgtt cgcggccgat ctcgctagtc ccgtgcacga ctgcgttcgt
     1141 caggtcgaag atctattgaa cctgcggcgg ccgttcgagc cggagagcgc gcgctggtcg
     1201 tttcgtatcg cggccagcga ctacgtcgtg ttcctagtgc tcggcgcgct gctgaaatcg
     1261 ttgaccgagc gtgcgccgaa catctcggtg cgattcatgg cgctcgagcc gagcgcgggc
     1321 gaacgcctcg cggccgggga gctcgatttc gcggtcttgc cggcggagct cgagccgaac
     1381 ctgccgtccg tgccgctgtt cgaggactct tgggtctgcg ccgtgtggtc cgggcatccg
     1441 cacacgcgcg agcagttcac gctcgaggag tttctcgcga ttccgcacct gagctttcgg
     1501 ctcgccggtc ccgatcatgg gtcgatcgcc gagagctatc tcgcgcagct cggcttcgag
     1561 ctcaaaatcg tcgcgtcgac cgagagcttc gcgacggcgc catttctgct gcgcgacacg
     1621 ccgttcgtga cactggtgcc gcgccggctc ggcgagcggc tgcaa
//
LOCUS       DATCUD010000524         3689 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69240, whole genome shotgun sequence.
ACCESSION   DATCUD010000524 DATCUD010000000
VERSION     DATCUD010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3689
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69240"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2257)
                     /locus_tag="VIQ99_07690"
     CDS             complement(<1..2257)
                     /locus_tag="VIQ99_07690"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9183066.1"
                     /translation="MQLLADPIMAFAALVVLLLIMALVWAGSRRPYVREVERLREDLH
                     GLLASSERAERIAVNGRLSPFVDITASMNRLLDRREEAPPVEPPPELSVAKERAALFD
                     ALAETLPEVALIHTNTILFANRAAGELFGVDPNTLIGKPITDLLRPAYRALMRKHVGG
                     ASGTEEPEPLAPFEVQLISSDEQGLWAELHSRRLTYGGEPALLTVARDITHRKSLEAS
                     LGRGKLQARITLESIGEGVITTDRNGTIDYMNEAAEQLIGGTRSAGIGKRLLDLISLV
                     DEIDRSSLGDPVAKCLTERRRVNLGRRAFLLSKQAEREFSTELTASPIRGPDGQVAGC
                     VVIFHDVSELRGLAREMSYQASHDALTGLVNRAEFERRLETALNSARGEGVGHVVCYL
                     DLDRFKLVNDTGGHIAGDNLLREIGALLKQRVRDSDTVARVGGDEFAMLLAGCPLDKA
                     QQIADDVVQAVASHQFAWQDRVFDVGVSVGLVEVGKDSGSAESVLGAADSACYIAKQQ
                     GRGRTHVYSTRDEVMARERGEIQWLQRLQRALKENGFELYVQPIVAMSGRSRSGPAAE
                     VLLRMRDESGGSILPVHFLASAERYQLMSHIDRWVVQTTLTAIAGGAPHLPAGRTCNI
                     NLSAQTLGDDDFLEFVVDVLDHTGVSPERICFEVRESAVVSQLDQAQRFINVLHGIGC
                     RFALDNFGSGIGSFANLKNLSLDFLKIDGTYTRNLETDSVNREMVAAMVKLARTLDFQ
                     VVAEQVEDQTSF"
     gene            2601..3251
                     /locus_tag="VIQ99_07695"
     CDS             2601..3251
                     /locus_tag="VIQ99_07695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEY9183067.1"
                     /translation="MNFDVARTQMLGQQLRAWEVLDDRVLRAFRETPREHFVPDEYRD
                     LAFADIEIPLGHGQSMLTPKIEGRILQALQVEAIDDVLVVGTGSGYLTACLARLARHV
                     SSVDIFPDFIPPAQTRIAAYGIVNVELRAADALTLSYSSRFDAIAITGSVPVLERQFL
                     EMLRPEGRLFIVVGREPAMEAQLITMQPNGTTTTASLFETVLTPLINAERPEPFVL"
     gene            3273..3608
                     /locus_tag="VIQ99_07700"
     CDS             3273..3608
                     /locus_tag="VIQ99_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY9183068.1"
                     /translation="MPGVPELSPTEFNQRWPDHARSADVVLLDVREPAELEIASVASA
                     LHIPMREIPARLAELDRDTALVVMCHSGGRSRRVAEYLLANGFSSVFNLSGGIDAWST
                     QLDSHVPRY"
BASE COUNT          648 a         1231 c         1159 g          651 t
ORIGIN      
        1 cgaacgacgt ctggtcctcg acctgctcgg cgacgacttg gaagtcgagg gtccgcgcga
       61 gcttgaccat cgcggccacc atctcgcgat tcacgctgtc ggtctcgagg ttgcgcgtat
      121 acgtgccgtc gatcttgagg aaatcgagcg acaagttctt gaggttcgcg aaagagccga
      181 tgccgctgcc gaagttgtcg agcgcgaacc ggcagccgat gccgtgcaag acgttgatga
      241 agcgctgcgc ctggtcgagc tggctcacga cggccgactc gcgcacctcg aagcagatgc
      301 gctcggggct gactcccgtg tggtcgagca cgtcgacgac gaactcgagg aagtcgtcgt
      361 cgccgagcgt ctgcgcggac aagttgatgt tgcacgtgcg cccggccggc agatgcggcg
      421 cgccgccggc aatcgccgtc agcgtcgtct gcacgaccca gcgatcgatg tgcgacatca
      481 gttgataacg ctcggccgac gcgaggaagt gcacgggcaa gatcgagccg cccgactcgt
      541 cgcgcatgcg cagcagcacc tcggcggccg gaccgctgcg gctgcgcccg ctcatggcca
      601 cgatcggctg cacatagagc tcaaagccgt tctctttgag cgcgcgctgt agccgctgca
      661 gccactggat ctcgccgcgc tcgcgcgcca tgacctcgtc gcgcgtcgag tagacgtgcg
      721 tgcgaccgcg accctgctgt ttggcgatgt agcacgcgga atcggctgca ccgagaacac
      781 tctcggcgga gccgctatcc ttgccaacct cgacgagccc tacgctgacg ccgacgtcga
      841 acacgcggtc ttgccaggcg aactgatggc tggcgacggc ctgcacgaca tcgtcggcga
      901 tctgctgtgc cttgtcgagc gggcagccgg cgagcagcat cgcgaactcg tcgccgccga
      961 cgcgcgcgac ggtatccgaa tcgcggacgc gctgcttcaa gagtgcgccg atctcgcgca
     1021 acaagttgtc gcccgcaatg tggccgcccg tgtcgttgac gagcttgaat cggtcgagat
     1081 cgagatagca gacgacgtgg ccgacgcctt cgccgcgcgc ggaattgagc gcggtctcga
     1141 gccgccgctc gaactccgcg cggttgacga ggcccgtcag cgcgtcgtgg ctcgcttgat
     1201 acgacatctc gcgagcgagc ccgcgcagct cgctgacgtc gtggaagatc acgacacagc
     1261 ccgcgacttg accgtcaggt ccgcggatcg gcgacgccgt gagctcagtc gagaattcgc
     1321 gctcggcctg cttgctcaac aggaacgcgc gccgcccgag attcacgcgc ctgcgctccg
     1381 tcaaacactt ggccaccggg tcgccgagcg agctgcggtc gatctcgtcg accagagaga
     1441 taagatcgag cagccgcttg ccgataccgg cgctgcgcgt gccgccgatc agctgttcgg
     1501 cggcctcgtt catgtaatcg atcgttccgt tgcggtccgt cgtgatgacg ccttcgccga
     1561 tcgattcgag cgtgatgcgt gcctgcagct tgccccgccc gagcgacgcc tcgaggctct
     1621 tgcgatgcgt gatgtcgcgg gcgaccgtca ggagtgcggg ctcgccgccg tacgtgaggc
     1681 gcctgctgtg cagctcggcc catagccctt gctcatcgct gctgatcagc tgcacctcga
     1741 acggcgcgag cggctccggc tcttcggtac ccgacgcacc gccgacgtgc ttgcgcatca
     1801 acgcccgata cgcgggacgc aagaggtccg tgatcggttt gccgatcaga gtgttgggat
     1861 cgacgccgaa cagctcgccg gcggcgcgat tcgcgaacag gatcgtgttg gtatggatca
     1921 gcgcgacctc gggcagcgtc tcggccagcg cgtcgaacag cgcagcgcgc tccttcgcca
     1981 cgctgagctc cggcggcggc tcgacgggcg gcgcctcctc acgacgatcg agcaatcggt
     2041 tcatcgacgc cgtaatgtcg acgaatgggc tcaagcgccc gttcacggcg atccgctctg
     2101 cgcgttcgct cgacgcgagc aggccgtgga ggtcttcgcg gaggcgctcg acctcgcgca
     2161 cgtacggccg ccgcgacccg gcccacacga gcgccatgat caggagcagc acgacgagcg
     2221 ccgcgaacgc catgatcgga tcggcgagca gctgcatcag gccgactccg gcctggccgt
     2281 gaggcctgcc gtatgttcgg cggtgtaatg tccgcgatcc tcagtacgta taaaccggag
     2341 gtggcgaacc gacagcgaaa tccctgctgg cacgtgagtg cgaggcccca tgtgtggccg
     2401 cgcgtcgctg cgcggcgttg gctttattgt tgttgtcggg aagcacaaac cactgctttc
     2461 ccgcgctttt cacgataccc caacgtgccc gaggcgtcgc tgcaaattga ccataattct
     2521 tcacataccg ccttgaacgg catgaataaa ctccttaccc taccccgttc gcccgcagcc
     2581 ccggccgccg agagaattcc atgaatttcg acgtcgcacg cacccaaatg ctcggccaac
     2641 agctcagggc ctgggaagtg ctcgatgatc gcgtgctgcg tgctttccgc gaaacgccac
     2701 gcgagcactt cgtgccggac gaatatcgcg acctcgcgtt cgccgacatc gaaatcccgc
     2761 tggggcatgg ccaatccatg ctcacgccga aaatcgaagg ccgcattctg caagcgctgc
     2821 aggtcgaggc gatcgacgac gtgctcgtgg tcggcaccgg cagcggttat ctgactgcct
     2881 gtctcgcgcg cctggcacga catgtctcga gcgtcgacat ctttccggac ttcatcccgc
     2941 ctgcgcagac caggatcgca gcttacggca tcgtcaacgt cgagttgcgg gccgccgacg
     3001 cgcttacgtt gtcctattcc agccgcttcg acgcgatcgc catcactggc tccgtcccag
     3061 tattggaacg gcaattcttg gaaatgcttc gccccgaggg gcggctgttc atcgtggtcg
     3121 gccgcgaacc cgccatggag gcccaactca tcacgatgca accgaacggc acgacgacga
     3181 ccgcgagcct gttcgagacc gtgctcacgc cgctgatcaa cgccgaacgg ccggagccct
     3241 tcgttctcta gccagagaac ccgagcgcga tcatgccggg agttccggag ctaagcccta
     3301 ctgagttcaa ccagcgctgg ccggaccacg cacgcagtgc cgacgtcgtc ctgctcgacg
     3361 tccgcgagcc tgccgagctc gagatagcgt cagtggcatc cgccttgcat atcccgatgc
     3421 gggagatacc ggcgcggctc gccgagctcg atcgcgacac cgcgttggtc gtgatgtgtc
     3481 attcgggcgg ccgcagccgc agggtcgccg agtacttgtt ggccaacggg ttctccagtg
     3541 ttttcaatct cagcggcggt atcgacgcgt ggtcgacgca gctagactcg cacgtgcctc
     3601 gctactagaa gaacggaact agaagaacgg atttctgctt tacccccaag aagtgcatac
     3661 agggacacat atgacgctta taaaacgac
//
LOCUS       DATCUD010000525         2089 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97664, whole genome shotgun sequence.
ACCESSION   DATCUD010000525 DATCUD010000000
VERSION     DATCUD010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2089)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2089)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2089
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97664"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2089)
                     /locus_tag="VIQ99_07705"
     CDS             complement(<1..>2089)
                     /locus_tag="VIQ99_07705"
                     /inference="COORDINATES: protein motif:HMM:NF037016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PA14 domain-containing protein"
                     /protein_id="HEY9183069.1"
                     /translation="GNWKLEFAAGRIESRLAVSDAEQAEWAGLLAAPVLDLNGPATFT
                     ASDGFPSETYSGGAGWTSGWTEFDASPSRFVAGTSNSDNSPASGNVLYGTRAGGGNEM
                     AIVGHASQSGDSIQRSVNLLAYTSATLSFDYRLQNVESPDAVQVQVSNNGGATFASLA
                     TYTTNGSGSASFDISPYISDKTVIRFKVTGGFETNDDRFFFDNVQITANGNNYDTTFT
                     EGGAPVAVAGSATTVTDPDGSLLQGATVTLANAQAGDILAISGVLPGGIAGSVSGNTV
                     TLSGSASGANYADAIKLITFSNTSAAPSTTTRTLSIQATDATDEVSLVATSYVRVVSV
                     DSPALAQPDTFTGPNFGSITGNVLLDNGAGADSDIDAVAPLTVATTPVTSPTQGTLVL
                     NSDGTFTYTPTGAGTYTDTFQYRLISLAQVPGTSYEYWNVGPSSYTATTGLIPNFPSG
                     PPNATGFLSGFDVDQAALNYGNTSLNNFTVRFTTQFDVTAGGTYTFYAGSDDGAIVYV
                     DGTLVANNDGAHSYQERSGTIALTPGRHTLRVDFFEIGGQEDLVVSYAGADTAGIRTD
                     MSGAVGLLAPSHSTGTVTINIVAGAPRLGTGSTLNYTENQAAAVVNGVITVTDPDTTT
                     LASATVAIASNFAAGQDVLGFVNGAGMGNIAGSYNAATGVLTLTSAGATATLAQWQAA
                     LRAVTYLNASDAP"
BASE COUNT          288 a          651 c          771 g          379 t
ORIGIN      
        1 ctcggcgcat cgctggcgtt gaggtaggtc actgcgcgga gcgcggcctg ccactgcgca
       61 agcgtggcgg tcgccccggc ggaggtgagg gtgagcaccc cggtggcggc gttgtagctg
      121 ccggcgatgt tgcccatgcc ggcgccgttg acgaagccga gcacgtcctg gccggcagcg
      181 aagttgctgg cgatcgcgac ggtggcgctc gccagcgtgg tggtgtcggg atcggtgacc
      241 gtgattacgc cgttgacgac ggcggccgcc tggttctcgg tgtagttgag cgtgctgccg
      301 gtgccgagcc gcggcgcgcc ggcaacgata ttgatcgtca ccgtcccggt cgagtgcgaa
      361 ggcgccagca agcccaccgc gcccgacata tcggtcctga tgccggccgt gtctgcgccg
      421 gcgtacgaga cgaccaggtc ttcctgtccg ccgatctcga agaaatcgac tcggagcgtg
      481 tgccggccgg gcgtcaaggc gatcgtcccg cttcgctcct gataggaatg cgcgccgtcg
      541 ttgttcgcga cgagcgtgcc gtcgacgtag acgatcgcgc cgtcgtccga gccggcgtag
      601 aaggtgtatg tcccgccggc ggtgacgtcg aactgggtcg tgaaccgcac ggtgaagttg
      661 ttcaggctcg tgtttccgta gttcagcgcg gcctggtcga cgtcgaagcc ggacagaaag
      721 ccggtcgcgt tcgggggacc ggacgggaag ttgggaatca ggccggtcgt cgcggtgtag
      781 ctgctcgggc ccacgttcca gtactcgtag ctcgtgccgg gcacctgcgc gaggctgatg
      841 agccggtact ggaaggtgtc ggtgtaggtg ccggcgccgg tcggggtgta ggtgaacgtg
      901 ccatcgctgt tgagcaccag cgtgccctgc gtggggctcg tcaccggggt cgtcgcgacc
      961 gtgagcgggg cgacggcatc gatgtcggag tccgccccgg cgccgttgtc gagcagcacg
     1021 ttgccggtga tcgagccgaa gttcgggccg gtgaacgtgt ccggctgagc cagggccgga
     1081 ctgtcgaccg acaccacgcg cacgtaggac gtcgcgacca ggctcacctc gtcggtcgcg
     1141 tcggttgcct ggatgctcag cgttcgcgtg gtcgtgctgg gcgctgcgct cgtgttgctg
     1201 aacgtgatca gcttgatcgc gtcggcgtag ttcgcgccgc tcgccgaacc ggacagggtg
     1261 accgtgttgc cgctgacgga cccggcgatc ccgcccggga gcaccccgct gatcgccagg
     1321 atgtctcccg cctgggcgtt ggcaagcgtt accgtcgcgc cctgtaagag gctgccgtcg
     1381 gggtcggtca ccgtcgtcgc actgccggct accgcgaccg gagcgccgcc ttcggtgaaa
     1441 gtcgtgtcgt agttgttgcc gttcgctgtg atctggacgt tgtcgaagaa gaaccggtcg
     1501 tcgttcgtct cgaatccgcc ggttaccttg aagcggatta ccgtcttgtc cgagatgtag
     1561 ggcgagatgt cgaagctggc gctgccggat ccgttggtgg tgtaggtggc gagcgacgcg
     1621 aacgttgcgc cgccgttgtt cgagacctgc acctggaccg catcgggcga ctcgacgttc
     1681 tgcaggcgat agtcgaagga gagcgtcgcg ctcgtgtacg cgagcaggtt caccgaccgc
     1741 tggatcgagt cgccggactg gctggcgtgg ccgacgatcg ccatttcgtt cccgccgccg
     1801 gcgcgcgtgc cgtacagcac gttgcccgat gcgggactgt tgtcgctgtt ggacgtaccc
     1861 gcgacgaagc gggacgggga ggcgtcgaac tcggtccagc cggaagtcca gcccgcgccg
     1921 ccggagtagg tctcggacgg gaagccgtcc gaggccgtga aggtcgccgg tccgttcaag
     1981 tccaggacgg gcgcggcgag caggccggcc cattcggcct gctccgcgtc gctgaccgcc
     2041 agccgactct cgatccggcc ggcggcgaac tcgagcttcc agttcccgc
//
LOCUS       DATCUD010000526         1719 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97687, whole genome shotgun sequence.
ACCESSION   DATCUD010000526 DATCUD010000000
VERSION     DATCUD010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1719
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97687"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VIQ99_07710"
     CDS             <1..652
                     /locus_tag="VIQ99_07710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183070.1"
                     /translation="LVVSNAMHKQSESDWAPLPNLSAFTAEEIAAVEQWVRAGGSLLL
                     IADHMPLAGHAEALAAAFGVRFQNGFAFDSARNGRITFRRTAGSLAPGIIADGRDSNE
                     RVDFVTTFTGQAFRVDPGVDMDPLMVVPHGYELLLPEVAFEFSERTPRIPAANLLQGA
                     LVRHGDGRVAVFGEAAMFSAQLAGPDRRPMGMNAPDARENYRYALNVLHWLSGALN"
     gene            complement(649..1251)
                     /locus_tag="VIQ99_07715"
     CDS             complement(649..1251)
                     /locus_tag="VIQ99_07715"
                     /inference="COORDINATES: protein motif:HMM:NF016085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEY9183071.1"
                     /translation="MALRYVLTDGQIEIAWPCRVVEDGADVVALFIAAGSRYKAGPKR
                     TAAEKHLRPSPQLPPDEHVWRSDTLRLMFPGRRHSVSLFWERGNNGTQFDRYFVNLEE
                     PFRRTAIGFDTQDHTLDVVVRPDLECTWRDEAEFANHVREGFFTPELASRIRAEGARV
                     IDEITKRTHPCLSGWSGWRPRAEWGVPTIPAGWDARPDRL"
     gene            1413..1622
                     /locus_tag="VIQ99_07720"
     CDS             1413..1622
                     /locus_tag="VIQ99_07720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183072.1"
                     /translation="MFTSTIILKGSVVVEGVSFSWWVRDGWEPMLTVSNHNHGTATRP
                     LGTAEPVVQARAIAKSMIGRTHSRT"
BASE COUNT          285 a          562 c          562 g          310 t
ORIGIN      
        1 gctcgttgtc tccaatgcca tgcacaaaca gagcgaatcc gattgggcgc cgctgcccaa
       61 tctttcggca ttcaccgccg aagaaatcgc cgcggtggag cagtgggtcc gtgcgggcgg
      121 ctcgttgttg ttgatcgcgg accacatgcc gctcgcgggc cacgccgagg cgttggctgc
      181 cgcgttcggc gttcgattcc aaaacggttt cgcattcgac tctgcgcgca acggccggat
      241 cacgttccgc cgcaccgccg gttcgctggc tcccggcatc atcgccgacg gccgcgacag
      301 caacgagcgc gtggatttcg tgaccacgtt tacgggccaa gcgttccgtg tcgaccccgg
      361 cgtggacatg gacccgttga tggtcgtgcc gcacggctat gagttgttgc tgccggaagt
      421 tgcgttcgag ttctccgagc gcacaccgcg gatcccggcc gccaatttgc tgcaaggtgc
      481 tttggtgcgt cacggcgatg gacgagtcgc cgtcttcgga gaagcagcga tgttcagcgc
      541 gcagctcgcg gggccggacc ggcggccgat gggcatgaac gcgcccgatg cgcgcgagaa
      601 ttaccgctac gcgctgaacg tcttgcattg gttgagcgga gcgttgaact agagcctatc
      661 cggccgcgca tcccaaccgg cgggaatcgt cggaacaccc cactccgccc gaggtcgcca
      721 tccgctccac cccgacaagc acgggtgcgt gcgtttcgtg atctcgtcga tgacgcgcgc
      781 gccttcggcg cgaatgcggc tcgcgagctc cggcgtgaag aagccctcgc gcacgtgatt
      841 ggcgaattcc gcttcgtcac gccacgtgca ctcgagatcg ggccgaacca cgacgtcgag
      901 agtgtggtcc tgcgtatcga atccgatcgc cgttctgcgg aacggctctt cgaggttcac
      961 gaagtagcgg tcgaattggg tgccgttgtt ccctctctcc cagaacaacg acaccgagtg
     1021 ccgccggccc ggaaacatca gtcgcagcgt atcgctgcgc cacacgtgct cgtcgggcgg
     1081 tagctgcggg ctcggtctca agtgcttctc ggcggcggtg cgcttgggcc cggccttgta
     1141 gcggctgccc gcggcgatga atagagcgac gacgtcggcg ccgtcctcga ccacacgaca
     1201 cggccaagcg atctcgattt gcccgtcggt caagacgtaa cgcagcgcca cgacctcacc
     1261 gggtcgccgc ctggcggcgg aatcacccat ggcgcgcgat tgtaccgatg acaacggtgc
     1321 tattcgcggg actcgcgggg cggccccgcg cccgggccgg ttcgtgacgg ccgccacgga
     1381 cttatttagc cggtgcaagt accattctcg gcatgtttac gagcacgatc attctcaagg
     1441 gcagcgtggt cgtcgagggc gtctcgttct cgtggtgggt tcgcgacggc tgggagccga
     1501 tgctgaccgt gagtaaccat aatcacggca ccgcgacgcg gccgctcggc accgcagagc
     1561 cggtggtcca ggcgcgagcc atcgcgaaga gcatgatcgg ccgcacccac tctcgcacgt
     1621 aaccatccgc cgattgatcg aacgctcgcg gacgcggcgc tgagcttccg ctatccttcg
     1681 gagcgaaatc gcaacggggg gaagcgcgca tgagagttg
//
LOCUS       DATCUD010000527         2449 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40675, whole genome shotgun sequence.
ACCESSION   DATCUD010000527 DATCUD010000000
VERSION     DATCUD010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40675"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(96..764)
                     /gene="yrfG"
                     /locus_tag="VIQ99_07725"
     CDS             complement(96..764)
                     /gene="yrfG"
                     /locus_tag="VIQ99_07725"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010321547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HEY9183073.1"
                     /translation="MTPAAKSIVDWDAVDTVLVDMDGTLLDLAFDNYFWRELVPQRYA
                     QLNGMSIAAAHERLAPRFAAKVGTLDWYCLDHWTRDLRMDLKSLKREHRAHIRFLPGA
                     PEFLAAARGRGKRVSIVTNAHRDTFEVKAEHTGIDRLVDDVVCSHDFAAPKESAAFWQ
                     ALARHAPFDARRTLLIEDSVAVLTAARAHGVAHTVAVRQPDSREPPRTIAEFVAIDGV
                     FELV"
     gene            788..1618
                     /gene="cysQ"
                     /locus_tag="VIQ99_07730"
     CDS             788..1618
                     /gene="cysQ"
                     /locus_tag="VIQ99_07730"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010962173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEY9183074.1"
                     /translation="MATLPETRRLLTAVCDIARTAGHAILEVYRTDFAVARKSDDSPL
                     TEADRAAHEIIVRGLARLGDTPVLSEESAPEDHATRRSWSRYWLVDPLDGTKEFLKRN
                     GEFTVNIALVDDHRAVLGVVYAPVLDRSYFGAVDLGAWREEAGRAAHAISVEQTARSP
                     LRVVGSRSHPAPELAGYLAGLGPYEITDMGSSLKICLVAEGAADLYPRFGPTSEWDTA
                     AAQAILESAGGRMIDKTGRPLRYNSKDDLLNPHFLAFGDPRRDWLAPIQDTRGRESRN
                     "
     gene            1632..1811
                     /locus_tag="VIQ99_07735"
     CDS             1632..1811
                     /locus_tag="VIQ99_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007422935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEY9183075.1"
                     /translation="MERLKQLRVEHRDLDQVISRLVNDPNVDQLMLKRLKKRKLMLKD
                     MITQLESARIPDLNA"
     gene            1825..>2449
                     /locus_tag="VIQ99_07740"
     CDS             1825..>2449
                     /locus_tag="VIQ99_07740"
                     /inference="COORDINATES: protein motif:HMM:NF014715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - glucose binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEY9183076.1"
                     /translation="MDLMADIGATSTRCALLDDQGREVAPEVFENADFTGVAGVLGVY
                     LDHRRASDRPKRAALAVAAPIAGDDVQMINIAWRFSQRELRESLGFTRLQVCNDFAAI
                     AWGLPHLGPADLAKIGGGEAAPRATLATLGPGSGLGVGALVPATDGWAVMTGEGGHVS
                     MPAQTPEEQNVIALLRERFGGHCSAERVLSGPGLVNLYVALAELAGRG"
BASE COUNT          431 a          820 c          804 g          394 t
ORIGIN      
        1 tcgaccccga cgacgtcagc gtggtgatca agaagaaatc gggcggcgcg cgttgagctg
       61 cgcacgcgac gcctttcacg caggcggcgt gagacctaaa cgagctcgaa cacgccgtcg
      121 atcgcgacga actcggcgat cgtacgcggc ggttcccgcg agtcgggctg ccgaacggcc
      181 acggtgtgcg ctacgccgtg cgcgcgcgcg gccgtgagca ccgcgacact gtcctcgatc
      241 agcagcgtgc gccgggcgtc aaacggcgcg tgacgcgcga gcgcttgcca gaatgccgcc
      301 gactccttcg gcgccgcgaa atcgtgcgag cacaccacgt cgtccacgag acggtcgatg
      361 ccggtatgct cggccttcac ctcgaacgtg tcccggtgcg cgttcgtcac tatcgagacg
      421 cgcttgccgc gtccgcgcgc ggcggccaag aactccggcg caccgggtaa gaagcgaatg
      481 tgcgcgcggt gctctcgctt cagagacttc aagtccatgc gaaggtcgcg cgtccaatga
      541 tcgaggcaat accagtcgag cgtgccgacc ttggcagcga accgcggcgc gaggcgctcg
      601 tgcgcagccg caatgctcat gccgttcaac tgtgcgtagc gttgcggcac gagctcacgc
      661 cagaagtagt tgtcgaaggc gagatcgagc aacgtgccgt ccatgtcgac gagcacggtg
      721 tcgaccgcat cccaatcgac gatcgatttg gctgccggcg tcatgtctct atgatacaag
      781 acgtcccgtg gctacccttc cggaaacacg ccgactgctg accgccgtgt gcgacatcgc
      841 ccgcacggcg ggccacgcca ttctcgaggt ctaccgcacg gacttcgccg tcgcgcgaaa
      901 gagcgacgac tcgccgctga cggaagcgga tcgagccgca cacgagatca tcgttcgcgg
      961 cctcgcgagg ctcggcgaca caccggtcct ctcggaggag tcggcgccgg aagatcacgc
     1021 gacgcgacgc agctggtcgc gctattggct cgtcgatccg ctcgacggca ctaaggagtt
     1081 cctcaagcgc aacggcgagt tcacggtcaa catcgccctc gtcgacgacc atcgcgccgt
     1141 gctcggtgtc gtgtatgcgc ccgtgctcga ccgcagttat ttcggcgccg tcgacctcgg
     1201 cgcgtggcgc gaggaagccg gccgcgctgc gcacgcgatc tccgtggagc agactgctcg
     1261 ctcgccgctc cgggtcgtgg gcagccgcag ccatcccgca ccggagctcg ccgggtatct
     1321 cgccgggctc gggccgtacg agatcaccga catgggcagc tcgctgaaga tctgtctcgt
     1381 ggccgagggc gcggccgacc tctatccgcg cttcggcccc acctcggaat gggacacggc
     1441 cgcggcgcag gctatcctcg aaagtgcggg cgggcgtatg atcgacaaaa caggtcgccc
     1501 gctgcggtac aactccaaag acgacctact gaaccctcac tttctcgcct ttggcgatcc
     1561 gcggcgggac tggttggcac cgatccaaga cacgcgtgga cgagaaagtc gaaactgaga
     1621 ccttcagaaa cgtggagcgg ctcaagcaat tgcgcgtcga gcaccgggac ctcgaccagg
     1681 tcatctcccg gctcgtcaac gatccgaacg tcgatcaact catgctcaag cgcttgaaga
     1741 agcgcaagct gatgctgaag gacatgatca ctcagctcga gagcgcgagg atccccgacc
     1801 taaacgcctg acgagccccc ccaaatggac ttgatggccg acatcggtgc cacgagcacg
     1861 cgctgtgcgc tcctcgacga ccagggcaga gaggtcgcac cggaggtatt cgagaatgcc
     1921 gacttcaccg gcgtcgccgg cgtgctcggc gtttatctcg atcatcgtcg cgccagcgat
     1981 cggccgaagc gcgccgcgct cgcggtcgcg gcaccgatcg ccggcgacga tgtgcagatg
     2041 atcaatatcg cgtggcgctt ctcgcagcgc gagttgcgcg aatcgctcgg cttcacccgt
     2101 ctgcaagtct gcaacgactt cgcggccatc gcttggggct taccgcactt gggccccgcg
     2161 gatctcgcga agatcggcgg aggtgaagcc gcaccgcggg cgacgttggc cacgctcggc
     2221 cccggctcgg ggctcggtgt cggggcgctc gtgccggcga ccgatggttg ggccgtgatg
     2281 acaggcgaag gcggtcacgt ttcgatgccc gcgcaaacac ccgaggaaca gaacgtgatc
     2341 gcactgctgc gcgaacggtt cggcgggcat tgctcggccg agcgcgtgct gtcgggtccg
     2401 gggctcgtga acttgtacgt cgcgctcgcg gagctcgcgg gccgtggtc
//
LOCUS       DATCUD010000528         2480 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33637, whole genome shotgun sequence.
ACCESSION   DATCUD010000528 DATCUD010000000
VERSION     DATCUD010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33637"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1346
                     /locus_tag="VIQ99_07745"
     CDS             <1..1346
                     /locus_tag="VIQ99_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014577818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEY9183077.1"
                     /translation="CPGLTVSLEVEKPKESETWVYSGGLEQYLKESLGPGDFVPDQPF
                     SGKLEGKREAVEWAVVWRRDGGGEAVLESYVNLIPTPQGGTHVNGMRTGLTDALREFC
                     EFRNLLPRGIKLAPEDVWDGVNFVLSVKIEEPQFSGQTKERLASRECATLVGGLVKDH
                     FALWLNQHPETGDAIAQFAIENAQHRLKAAKTVVRKRVVAGPALPGKLADCTMQDPEH
                     TELFLVEGDSAGGSAKQARDREYQAVMPLRGKILNTWEVEPGELLASQEVHNISVALG
                     VDPGSQNLDGLRYHKVCILADADSDGQHIATLLCALFLKHFEPLVAAGHVCVAMPPLF
                     RVDVGKEVHYCLDEAERDLLLDRMEAEKKTGKITVTRFKGLGEMNPSQLRETTMAKET
                     RRLVQLTVDGKTMGEAREVLDKLLAKKRASDRRDWLQDKGNLADLGVDSAGRPTL"
     gene            1343..>2480
                     /locus_tag="VIQ99_07750"
     CDS             1343..>2480
                     /locus_tag="VIQ99_07750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY9183078.1"
                     /translation="MKDQELNFDGLERVPLAVFTEKAYLDYSMYVILDRALPHLGDGL
                     KPVQRRIIYAMSDLGLSATSKPKKAARTVGDVIGKFHPHGDVACYEAMVHMAQSFSYR
                     YPIVDGQGNWGSQDDPKSFAAMRYTEAKLTRYAQVLLNELEQGTVDWQLNFDGTLSEP
                     QLLPAQLPNLLLNGTSGIAVGMSTDVPPHNLKEVANALIRLLDDPDATLGELMKSIKG
                     PDFPTGGELVSSRADLVQIYKTGTGTLRLRAQYEIEDGEVVITELPFQTSGAKVLEQI
                     AAQMTAKKLPLVEDLRDESDHENPTRLVLATKSKVDSEALMNHLFATTELERTVRVNI
                     NVIGLDGRPAVFGLKALLDEWLKFRTATVKRRLEHRLDRVAQRLH"
BASE COUNT          470 a          777 c          842 g          391 t
ORIGIN      
        1 tgtgccccgg gctcaccgtg tcgctcgagg tcgagaagcc gaaggaatcc gagacctggg
       61 tctatagcgg cgggctcgag cagtatctaa aggagtcgct tgggccgggc gacttcgtgc
      121 ccgaccagcc gttctcgggg aagctcgaag gcaagcgcga ggccgtcgag tgggccgtcg
      181 tctggcggcg cgacggcggc ggcgaggccg tgctcgagag ctacgtgaac ctgattccga
      241 cgccgcaggg cggcacccac gtgaacggca tgcgcacggg cctcaccgac gccctgcgtg
      301 agttctgtga gttccgcaat ctcctgccgc gcggcatcaa gctcgcgccc gaggacgttt
      361 gggacggcgt caacttcgtg ctctccgtga agatcgagga gccgcagttc tcggggcaga
      421 cgaaggaacg ccttgcctcg cgcgagtgcg cgacgctcgt cggcggcctc gtcaaggacc
      481 atttcgcgct gtggctgaac caacaccccg agaccggcga tgcgatcgca cagttcgcga
      541 tcgagaatgc gcagcatcgg ctcaaggcag cgaagaccgt cgtgcgcaag cgggtcgtcg
      601 cggggccggc actgcctgga aagctggccg actgcacgat gcaggatccg gagcacacgg
      661 agctgttcct cgtcgagggc gactcggccg gcggctccgc gaagcaagcg cgcgaccgcg
      721 agtaccaggc ggtcatgccg ctgcgcggca agatcctgaa cacctgggaa gtcgagcccg
      781 gcgagctgct cgcgtctcag gaggtgcaca acatcagcgt cgcgctcggt gtcgaccccg
      841 gctcgcagaa tctcgatggg ctgcggtatc acaaggtctg catcctcgcg gacgcggatt
      901 cggacgggca gcacatcgcg acgctcttgt gcgcgctgtt cttgaagcat ttcgagccac
      961 tcgtggcggc ggggcacgtc tgcgtggcga tgcctccgct gtttcgcgtc gacgtcggca
     1021 aagaggtgca ctactgcctc gacgaggcgg aacgcgacct cttgctcgat cgcatggaag
     1081 ccgaaaagaa aaccggcaag atcaccgtga cccgcttcaa gggtctcggc gagatgaacc
     1141 cttcgcaatt gcgtgaaacg acgatggcga aggaaacgcg ccgcctcgtg cagctcaccg
     1201 tcgacggcaa gaccatgggc gaggcgcgtg aggtgctcga caagctgctg gcgaagaaac
     1261 gagcgtcgga caggcgagat tggttgcagg acaagggcaa tctcgcggac ttgggcgtcg
     1321 atagcgcggg ccgaccaacc ctatgaaaga tcaagagctg aatttcgatg ggctcgagcg
     1381 cgtgccgctc gccgtgttca cggagaaggc gtacctcgac tactcgatgt acgtgattct
     1441 ggatcgcgca ctgccgcatc tcggggacgg cctgaagccc gtgcaacggc gaatcatcta
     1501 tgcgatgagc gacctgggtt tgtcggcgac gtcgaagccc aagaaggcgg cgcgcaccgt
     1561 cggcgacgtg atcggcaagt tccacccgca cggcgacgtc gcgtgctacg aagccatggt
     1621 gcacatggcg cagagcttca gctaccgcta tccgatcgtc gacgggcagg gcaactgggg
     1681 ctcgcaggac gatccgaagt cgttcgccgc gatgcgctac acggaggcca aactcacgcg
     1741 ctacgcgcag gtgctgctga acgagctcga gcaaggtacc gtcgactggc agctgaattt
     1801 cgacggcacg ctctcggagc cgcagctgct gccggcgcag ttgccgaact tgctcttgaa
     1861 cggcacgagc ggcatcgccg tcggcatgtc gaccgacgtg ccgcctcaca atctcaagga
     1921 ggtcgcgaac gcgttgatca ggctgctcga cgaccccgac gcgacgctcg gcgagctcat
     1981 gaagtccatc aagggtccgg acttccccac gggcggcgag ctcgtgtcga gccgcgcgga
     2041 cctcgtgcag atctacaaga ccgggaccgg cacgctgcgc ctgcgcgcgc agtacgagat
     2101 cgaggatggc gaggtcgtca tcacggagct gccgttccaa acctcgggcg ccaaggtcct
     2161 cgagcagatc gcggcgcaga tgaccgcgaa gaagctgccg ctggtcgagg acctgcgcga
     2221 cgagtccgat cacgagaacc cgacgcggct ggttctggcc acgaagtcga aggtcgactc
     2281 cgaggcgctg atgaaccatc tgttcgcgac gacggagctc gagcgcaccg tccgagtgaa
     2341 catcaatgtc atcggcctcg acggtcggcc cgccgtcttc ggcttgaagg cgctcctgga
     2401 tgaatggctg aagttccgga cggcgaccgt caagcggagg ctcgagcacc ggctcgatcg
     2461 cgtcgcgcag cggctgcata
//
LOCUS       DATCUD010000529         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61685, whole genome shotgun sequence.
ACCESSION   DATCUD010000529 DATCUD010000000
VERSION     DATCUD010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61685"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..412
                     /gene="pyrF"
                     /locus_tag="VIQ99_07755"
     CDS             <1..412
                     /gene="pyrF"
                     /locus_tag="VIQ99_07755"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEY9183079.1"
                     /translation="MEAAGLAKGERLKILVVTVLTSIAPNDLKEMGIGLSVEELARLR
                     AKQAVAAGCDGVITSGLEAKALREVLGSGPLIVTPGIRPSHGARDDQQRVVTPTLAFR
                     SGADYIVVGRPIRDAADPTEAAAAIQAEIAGVFG"
     gene            472..1677
                     /locus_tag="VIQ99_07760"
     CDS             472..1677
                     /locus_tag="VIQ99_07760"
                     /inference="COORDINATES: protein motif:HMM:NF016196.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEY9183080.1"
                     /translation="MRTFATALLAAMAAVYGATTWWLSGLGPWVGAARAFAEAALIGG
                     LADWFAVTALFRRPLGLPIPHTAIIPARKNQIGRALARFIRDHFLVRETVARHLDRTD
                     LANRLGLWLDDAGNAARVSRDLSASLKWSLATEDGGEMRAALGASVQSAFDQVPVSRA
                     VATVLEVLATGERADLVIDELVKLGRSAIDQHRVTIRVRIHEQSPWWLPKFVDQEIFD
                     KLMGELEALLDAIAADPNHAARRDIKARLATLHQAFAIDPALAAKSRALQRELVEHPA
                     VRTYAFDLWQRLRAELKAALDDETSQLRLGLTRELRQFATRLRNDSGLAADLNAWLRQ
                     LLLHVVDNYRDPLSEVVSATIESWDATATSRRIELNIGTDLQFIRVNGTLVGGLVGLA
                     LYLGGLAFG"
BASE COUNT          272 a          604 c          579 g          291 t
ORIGIN      
        1 catggaggcc gccgggctcg cgaagggcga gcggctaaaa atcctcgtcg tgactgtgct
       61 cacgagcatc gcgccgaacg acctgaagga aatgggcatc ggcctgtcgg tcgaggagct
      121 cgcgaggctg cgcgcgaagc aagccgtcgc ggctggatgc gacggcgtca tcacgtctgg
      181 gctcgaagcg aaagcgctgc gcgaggtgct cggctcggga cctctgatcg tgacgcccgg
      241 cattaggccc agccacggcg cccgcgatga tcagcagcgt gtcgtgaccc cgacgctggc
      301 gttccgctcg ggcgccgact acatcgtcgt cggccggccg attcgcgatg ccgccgatcc
      361 gacggaagcc gctgccgcaa tccaagccga gattgccggc gtcttcggat gaacggcccc
      421 gaagccgttc ccgcaccttc ggatcccggg ctcgctcgcc gcttgcggcg catgcgcacg
      481 ttcgcgaccg cgttgctcgc agcgatggcg gccgtatacg gcgcgacgac ttggtggctc
      541 tctggtctcg gaccgtgggt cggcgcagcc cgcgcgttcg ccgaggccgc cctgatcggc
      601 ggccttgccg attggttcgc ggtcacggcg ctgtttcgcc gcccactcgg cttgccgatc
      661 ccgcacaccg cgatcatccc ggcccgcaag aatcagatcg gccgcgcgtt ggcgcgcttc
      721 atccgcgatc atttcctcgt ccgcgaaacc gtcgcgaggc atctcgaccg aaccgacctt
      781 gcgaaccgct tggggctgtg gctcgacgac gccgggaacg cggcgcgcgt gagccgcgat
      841 ctcagcgcgt ctctaaagtg gtcgctcgca accgaagacg gcggcgagat gcgagccgcg
      901 ctcggcgcca gcgtgcaatc ggcgttcgac caggttccgg tcagccgcgc cgtcgcgacc
      961 gtgctcgagg tgctcgcgac tggcgagcgc gcggacctcg tgatcgacga gctcgtgaag
     1021 ctcggtcgca gcgcgatcga ccaacaccga gtcacgatcc gcgtgcggat tcacgagcag
     1081 agcccatggt ggctgccgaa gttcgtcgat caagagatct tcgacaagct catgggcgag
     1141 ctcgaggcgc tgctcgacgc aattgccgcc gacccgaacc atgccgcccg ccgcgacatc
     1201 aaagctcgcc tcgcgacgct acatcaggcg ttcgcgatcg acccggcgct ggcggccaag
     1261 agccgcgcct tgcagcgcga gctcgtcgag catccggccg tgcgcactta tgccttcgac
     1321 ctgtggcagc ggcttcgcgc cgagctcaaa gccgcgctcg acgacgaaac gtcgcagctc
     1381 cgcttggggc ttacgcgcga gctcaggcag ttcgcgacac gcctacgtaa cgactcgggc
     1441 ttggccgccg acttgaacgc gtggctgcgg cagctgttgc tgcacgtcgt ggacaactat
     1501 cgcgatccct tgagcgaggt cgtttcggcc acgatcgaaa gttgggatgc gacggccacg
     1561 tcgcgccgca tcgagctcaa catcggtacg gatctgcaat tcatccgcgt caacggcacg
     1621 ctcgtcggcg ggctcgttgg gctcgccctt tacttgggtg ggctcgcgtt cggctgagta
     1681 acgccgcggt ccttcagcgc gcgccgcaac accttgccga cgttggtctt cggcagcgac
     1741 tcgacg
//
LOCUS       DATCUD010000530         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90505, whole genome shotgun sequence.
ACCESSION   DATCUD010000530 DATCUD010000000
VERSION     DATCUD010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90505"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1463)
                     /locus_tag="VIQ99_07765"
     CDS             complement(<1..1463)
                     /locus_tag="VIQ99_07765"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183081.1"
                     /translation="MTRGARLAALLALTCAASASRALTIEYALDRPAALVACDERMYR
                     GARTEADTCYRKLLAENPDSRIKADAARALGDVREANSRFQAAIKEYPDDAALRTRWG
                     ELFIATHQNNEAIRLFQEALELDADYAPAKIGLAKVAAGQFEEKTREWARQVIEESPD
                     DALGAYLLLARAALEDGALDDGDDALDAALELAEDNDRSPLEAYALKASLDLLRNTTE
                     SPWTARALALNPSYGGVYTTPAHFYVITRRYREAIALLRKAVEIEPDLYSAHAELGLN
                     LLRENKIEEARRHLEIAYGGDPFSAPIVNTLRLVDSFDNFVVSQHPARPAAAGSNAAH
                     NPGSILRLHKDEAAVLEPYVLDVVNRTIDIYTKRYGFELKEPVIVELYPDHDDFAVRI
                     AGLPGIGLLGVTFGYLVAMDSPTGRADASFHWGTTLWHEMAHVFTLEATNHLVPRWFS
                     EGVSVFEEWSTGPLPGRHIPVPVLEAIKADKFLPIADL"
BASE COUNT          257 a          546 c          524 g          285 t
ORIGIN      
        1 agatccgcga taggcaagaa tttgtcggct ttgatcgcct cgagcaccgg caccggaatg
       61 tgtcgcccgg gcaacgggcc ggtgctccat tcctcgaaga cggagacgcc ctcgctgaac
      121 caccgcggca cgaggtgatt cgtggcctcg agcgtgaaca cgtgcgccat ctcgtgccac
      181 agcgtcgtgc cccagtggaa gctcgcgtcg gctcggccgg tcgggctgtc cattgcgacg
      241 aggtaaccga acgtcacgcc gagcaagccg atgccgggca ggccggcgat ccggaccgcg
      301 aaatcgtcgt ggtccggata cagctcgacg atcacgggtt ccttgagctc gaagccgtac
      361 cgcttggtat aaatatcgat cgtgcggttc acgacgtcca gcacgtaggg ctcgagcacg
      421 gcggcctcgt ccttgtgcag ccgcaagatc gagcctggat tgtgagccgc gttggatccc
      481 gccgcagccg gcctcgccgg atgctgcgac accacgaagt tgtcgaagct gtcgacgaga
      541 cgcagcgtgt tcacgatcgg cgcgctgaaa ggatcgccgc cgtacgcgat ctcgagatgc
      601 cgccgcgcct cctcgatctt gttctcacgc agcaggttca ggccgagctc ggcatgcgcc
      661 gagtacaaat cgggctcgat ctcgacggcc ttgcgcagca acgcgatcgc ctcgcggtag
      721 cggcgcgtga tcacgtagaa atgcgccggc gtcgtataaa ccccgccata gctcggattc
      781 agggccaatg ctcgtgcggt ccaggggctc tcggtcgtgt tccggagcag gtccagcgag
      841 gccttcagcg catacgcctc gagaggagaa cggtcgttgt cttcggcgag ctcgagcgcg
      901 gcgtcgagcg cgtcatcccc atcgtcgagc gccccgtcct cgagcgctgc ccgcgccagc
      961 agcaggtacg ccccgagagc atcgtcgggc gactcctcga tgacttgtcg agcccactcg
     1021 cgcgtcttct cctcgaactg tcccgccgcg accttcgcga gcccgatctt cgcgggcgcg
     1081 tagtcggcat cgagctcgag cgcttcctgg aacagcctga tcgcttcgtt gttctgatgc
     1141 gtcgcgatga acagctcgcc ccagcgcgtt cgcagcgccg cgtcgtccgg gtattccttg
     1201 atcgcggctt gaaaacgcga gttcgcctcg cgcacgtcgc cgagcgcgcg cgcggcgtcg
     1261 gccttgattc tcgagtcggg attctcggcc aacaacttgc gatagcaggt atcggcttcg
     1321 gtgcgcgcgc cgcggtacat ccgctcgtcg caggccacga gcgccgccgg acgatcgagc
     1381 gcgtattcga tcgtgagcgc acggctggcc gaggctgcgc aggtcagcgc gagcagcgcg
     1441 gcgagcctag ctcctcgcgt cactgcggcg gcctcggttg cgcggcgtcg atcttgccct
     1501 gcacctcggc gagcgagacc agcaaccgct gcagctcggc caggtaggcg tcggtcgcca
     1561 tcgactcgcg ccgcgcgcgc aacgcttcga tatcggcatc gatcttatcg cg
//
LOCUS       DATCUD010000531         1563 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40707, whole genome shotgun sequence.
ACCESSION   DATCUD010000531 DATCUD010000000
VERSION     DATCUD010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1563
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40707"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..185)
                     /locus_tag="VIQ99_07770"
     CDS             complement(<1..185)
                     /locus_tag="VIQ99_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007636214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4266 domain-containing protein"
                     /protein_id="HEY9183082.1"
                     /translation="MSTTRSPSIARGVVLAVLAIAASGCSVEPWVKPYERDHLADPIM
                     SFDPNPVSSSYTGHVYEA"
     gene            complement(190..678)
                     /locus_tag="VIQ99_07775"
     CDS             complement(190..678)
                     /locus_tag="VIQ99_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015047764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY9183083.1"
                     /translation="MLRAFSVFIVTALAASFAWAATLTGPAPGFTLQSREGTQVSLAS
                     LKGNVVMVNFWATWCVPCRQEMPHLQAIYERYNSLGFEIVAVNVEDNPEGARKWLEET
                     PVTFPVLFDPKNEVSKLYKVVTMPTTVLVARDGTMRFIHHGYKPGYEGEYQTQVRALL
                     RE"
     gene            complement(701..1360)
                     /locus_tag="VIQ99_07780"
     CDS             complement(701..1360)
                     /locus_tag="VIQ99_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011396457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel domain-containing
                     protein"
                     /protein_id="HEY9183084.1"
                     /translation="MESRFLVLFLTLTLVVGTLTGCGREQLVRTDEGGQPPVIEPDVE
                     RREVEPAKIDTEDFEVGIFAGQISVEDFGVNTVYGGRFAYHVTEGFFVEVAAGQADTE
                     LTSFERLSGAAQLLTDDQREYSYYNVSLGYNIFPGESFVGSERSLNMATYVIGGVGKT
                     TFAGDDRFTVNLGMGIRLMPLDWLAVHADVRDHIFDIDLLGQEKTAHNVEAHLGVTFF
                     F"
     gene            complement(1330..>1563)
                     /locus_tag="VIQ99_07785"
     CDS             complement(1330..>1563)
                     /locus_tag="VIQ99_07785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183085.1"
                     /translation="ASPYFTLGGGVIKTSPKATLVATVDREDSLAQAGVGVRAYITRS
                     FVFRAEYKAHVVFTSRDDNEEVREWKAGFSFFF"
BASE COUNT          296 a          505 c          469 g          293 t
ORIGIN      
        1 gcctcgtaca cgtggcccgt gtacgagctc gagacgggat tagggtcgaa cgacatgatc
       61 ggatcggcaa ggtggtcgcg ctcgtagggc ttcacccacg gctcgacgct gcagcccgag
      121 gctgcgatgg ccaacaccgc cagcacgacg ccgcgcgcga tcgaagggga tctcgttgtg
      181 ctcatgacgc tattccctca gcaacgcgcg aacctgggtc tgatattcgc cctcgtagcc
      241 gggcttgtag ccatgatgga tgaaccgcat ggtgccgtcg cgagcgacca ggaccgtggt
      301 cggcatcgtg acgaccttgt agagcttgct gacttcgttc ttgggatcga acaggaccgg
      361 gaacgttacc ggcgtctcct cgagccactt gcgcgcgccc tcggggttgt cttccacgtt
      421 cacggcaacg atctcgaagc ccaagctgtt gtaacgctcg tagatcgcct gcaagtgcgg
      481 catttcctgg cggcacggca cgcaccaagt cgcccagaag ttgaccatga cgacgttgcc
      541 cttgaggctc gccagcgaca cttgtgtacc ctcgcgcgat tgcagcgtga atccgggcgc
      601 cgggccggtc agtgtcgcgg cccacgcgaa cgaggctgcg agggcggtca cgatgaagac
      661 ggaaaacgcg cgcaacattg ctgacctccg aagtcgcaac ttagaagaag aacgtgacgc
      721 ctaggtgcgc ctcgacgttg tgggccgttt tctcctgtcc cagcaagtcg atatcgaaga
      781 tgtgatcgcg aacgtccgcg tgcacggcga gccaatcgag cggcatcagt cgtatcccca
      841 tccctaggtt caccgtgaaa cgatcgtcgc cggcgaacgt cgtcttgccg acgccgccga
      901 tgacgtaggt cgccatgttc agcgaccgtt cgctgccgac gaaactctcg ccggggaaaa
      961 tgttgtagcc cagcgacacg ttatagtagg aatactcgcg ttgatcgtct gtgagcaact
     1021 gcgcagcgcc gctaagacgc tcgaagctcg tgagctccgt gtcggcctgg ccggcagcga
     1081 cttcgacgaa gaatccttcc gtcacgtgat acgcgaaccg gccgccgtag accgtgttca
     1141 cgccgaaatc ctcgacgctg atctgcccgg cgaatatccc aacctcgaag tcttcggtgt
     1201 cgatcttcgc cggctcgacc tcacgccgtt cgacatccgg ctcgatcacg ggcggctgcc
     1261 cgccctcgtc cgtgcggacg agttgctctc gcccgcatcc cgtgagcgtc ccgacgacga
     1321 gcgtcagggt cagaaaaaga acgagaaacc tgctttccat tcccttactt cctcgttgtc
     1381 atcgcggctc gtgaaaacga cgtgcgcctt gtactccgca cgaaacacga agctgcgagt
     1441 gatatacgcg cgcacgccca cgcccgcctg agcgagggag tcctcacgat ccacggtcgc
     1501 gacgagcgtc gccttcgggc tggtcttgat cactccgccg ccgagcgtga agtacggcga
     1561 cgc
//
LOCUS       DATCUD010000532         2047 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33671, whole genome shotgun sequence.
ACCESSION   DATCUD010000532 DATCUD010000000
VERSION     DATCUD010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2047)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2047)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2047
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33671"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..151
                     /locus_tag="VIQ99_07790"
     CDS             11..151
                     /locus_tag="VIQ99_07790"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY9183086.1"
                     /translation="MTSSPFLLRALGPRGLKAMERLMGMLLVLLATQMLLNGVREFVE
                     SL"
     gene            complement(182..517)
                     /locus_tag="VIQ99_07795"
     CDS             complement(182..517)
                     /locus_tag="VIQ99_07795"
                     /inference="COORDINATES: protein motif:HMM:NF020967.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEY9183087.1"
                     /translation="MRKVFSSNEISETALVRDALVHHGVAATIQNEHSGGSAVPEFRP
                     PAEVWVSRDDDYENARRIVIETLSTLDSKSDAPPWACSNCHEENPQSFDICWNCGQDR
                     TNGSRSALR"
     gene            complement(658..1575)
                     /gene="ccoP"
                     /locus_tag="VIQ99_07800"
     CDS             complement(658..1575)
                     /gene="ccoP"
                     /locus_tag="VIQ99_07800"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEY9183088.1"
                     /translation="MASVATGFWAGWVAVITGISLLGLLWLVLSVYFTKDSAAAHGVD
                     DVWDETLREGTAPAPLWWFWFIVAMLAATVVYLILYPGMGAHRGVLEWTQGGQIAESR
                     ARFDASFGPDRERVVQTSITDLQLDADALRAGWHLYNNHCSACHGPEARGQAKMFPNL
                     SNDRWQWGGTERDITQTITVGRLAVMPPWQAALGDAGVAAAAEYVRALASGNAPADGR
                     GAEIYRTNCIACHQADGTGLAALGAPPLNDAEWLYGASLEDIRATIALGRNGQMPAFG
                     ERLDATQIKLLTAWLIAGAEPMRGVSAVD"
     gene            complement(1580..1711)
                     /locus_tag="VIQ99_07805"
     CDS             complement(1580..1711)
                     /locus_tag="VIQ99_07805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183089.1"
                     /translation="MTYLIFGGDMLVTAFMIGVVVWISLRDNDERIDAAARIPLEDE"
     gene            complement(1714..>2047)
                     /locus_tag="VIQ99_07810"
     CDS             complement(1714..>2047)
                     /locus_tag="VIQ99_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003810383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit II"
                     /protein_id="HEY9183090.1"
                     /translation="GSKRTGPDLHRLAGKYTDAWHRLHMTDPRAVVPSSIMPAYPWLA
                     EHAANASGDIVARMRALRTLGTPYTDAEIEAAPAALEGKTELDALIAYLQALGRFASD
                     EPEEHAGH"
BASE COUNT          314 a          679 c          680 g          374 t
ORIGIN      
        1 ggtcgcgctg ttgacgagct cgccgttctt gctgcgcgcg ctcggacccc gcggcttgaa
       61 ggcgatggag cgcctgatgg gaatgctgct cgtgctgctc gcgacgcaga tgctgctgaa
      121 cggcgtccgc gagttcgtcg agtcgctcta ggtcgagcgc gtcaaggtgc tcgcgcggag
      181 atcaacgcag cgcggaacgg ctgccgttgg ttctgtcctg accgcagttc cagcatatgt
      241 cgaacgactg tgggttctct tcgtgacaat tcgagcaagc ccagggtggg gcgtcggatt
      301 tgctatccaa tgtcgacagc gtttcgatga ctattcgccg ggcattctcg tagtcgtcat
      361 cgcgactcac ccacacttcg gctggtggcc gaaattccgg caccgccgac ccgccggagt
      421 gctcgttctg aatggtcgct gcgacgccat ggtgcactag cgcatctcga accagcgccg
      481 tctcgctgat ctcattcgag ctgaacactt ttcgcatctg gtcacgcctc tgtcgtgggt
      541 tccgtacgac ttggttcagt tccggcgatc cgcaatcgga tcgatcggcg gttccgcaaa
      601 atccctctcg agggattttg tgcgccgcgg tggtgcacgc ttccgcggaa gcgtgtgtca
      661 gtcgacggcg ctgacgccgc gcatcggctc cgcgcccgcg atcagccacg ccgtcagcag
      721 cttgatctgc gtggcgtcga ggcgttcgcc gaacgccggc atctggccgt tgcggcccaa
      781 agcgatcgtg gcgcggatgt cttcgagcga tgcgccatac agccactcgg cgtcgttcaa
      841 cggcggcgcc ccgagcgcgg ccaggcccgt gccgtcggct tggtggcagg cgatgcagtt
      901 cgtacggtag atctccgcgc ctcggccgtc ggccggcgcg ttgcccgacg cgagcgcgcg
      961 cacgtactcg gccgcggcgg cgacgcctgc gtcgccgagc gcggcttgcc acggcggcat
     1021 cacggcgagc cggccgaccg tgatggtctg tgtgatgtcg cgctcggtgc cgccccactg
     1081 ccagcggtcg ttgctcaagt tcgggaacat cttcgcttgg ccccgagctt cagggccgtg
     1141 acacgcgctg cagtgattgt tgtagaggtg ccagccggcg cgcagcgcgt cggcatcgag
     1201 ctgcaagtcc gtgatcgagg tttgcacgac ccgctcgcga tcggggccga agctcgcgtc
     1261 gaagcgggcg cggctctccg cgatctggcc gccctgcgtc cactcgagca cgccgcgatg
     1321 tgcgcccatc cccgggtaga ggatcaggta tacgacagtt gccgcgagca tcgcgacgat
     1381 gaaccagaac caccacagcg gcgccggcgc ggtgccctcg cgcaaggtct cgtcccagac
     1441 gtcgtcgacg ccatgtgcag ccgcggaatc cttcgtgaaa tacacgctga gcacgagcca
     1501 cagaaggccg agcagagaga tgcccgtgat cacggcaacc catccggccc agaagcctgt
     1561 cgcgacgctg gccatgtgcc tactcgtcct cgagcggaat ccgcgcggcg gcgtcgatac
     1621 gctcgtcgtt gtcgcgcaac gagatccaga cgacgacgcc gatcatgaac gccgtcacga
     1681 gcatgtcgcc gccgaagatc agatacgtca tcgtcagtgt cctgcgtgct cttcgggctc
     1741 gtcgctcgca aagcggccga gcgcttgcag ataggcgatc aacgcgtcga gctccgtctt
     1801 gccttcgaga gcggccggtg ccgcctcgat ctcggcgtcc gtatacggcg tgccgagcgt
     1861 gcgcagcgcg cgcatccgcg ccacgatgtc gccgctcgcg ttcgccgcat gctcggcgag
     1921 ccacggatac gcaggcatga tcgacgaggg gacgacggcg cgtgggtcgg tcatgtgcaa
     1981 ccgatgccag gcatcggtgt acttgcctgc caggcggtgc aaatcggggc cggtgcgctt
     2041 cgagccc
//
LOCUS       DATCUD010000533         1859 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19491, whole genome shotgun sequence.
ACCESSION   DATCUD010000533 DATCUD010000000
VERSION     DATCUD010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19491"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..898
                     /gene="radA"
                     /locus_tag="VIQ99_07815"
     CDS             <1..898
                     /gene="radA"
                     /locus_tag="VIQ99_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007187586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEY9183091.1"
                     /translation="LERVASREKLGVLAIDSIQTLFSEELQSAPGSVSQVRECAAELT
                     RFAKARGVATILIGHVTKEGTLAGPRVLEHMVDTVLYFESDVGSRFRIVRAVKNRFGA
                     ANEMGFFVMGEDGFREVKNPSAIFLARHGSPVPGSVTLVTREGTRPVLVEVQALVDRT
                     QAQSPRRLGQGFDSQRLGLLLAVLHRHCGFASADSDVFANVVGGLRVGETAADLAVAL
                     AVVSSLTERPVAQDLVVFGEIGLTGEIRPVPFGEERLAEAEKHGFKRAVIPRANTPRR
                     ALGIEVLPVDRLSDALKLVHAA"
     gene            complement(907..>1859)
                     /locus_tag="VIQ99_07820"
     CDS             complement(907..>1859)
                     /locus_tag="VIQ99_07820"
                     /inference="COORDINATES: protein motif:HMM:NF015436.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HEY9183092.1"
                     /translation="APKTIGALHPARVALPAALIYYPLLKIAYPIVWVLNLVANGTLR
                     LLGVRADLIASHSLSAEELRTVVAEAGVMVPRRHQRMLLSILDLDAITVDDIMVPRQE
                     IIGLDLDQPWEQNLATIQTSPHDRLPVYREDIDNIIGVTRVRDLLPELAKGELTQALL
                     LERIREPYFVPESTPLNKQLLNFQQHQRRSAFVVDEYGDVQGLITTQDIVNELVGELD
                     RDATPVDLGVTKESERSYVVDASANVRQLNRVMNWNLPTDGPKTLNGLIVEQLATIPE
                     SGTSVTVADYPIEILETTEHGIARVRVYAPSSAPPPKAAA"
BASE COUNT          296 a          569 c          645 g          349 t
ORIGIN      
        1 gctcgagcgc gtcgcgagcc gtgagaagct cggagttctc gcgatcgatt cgatccaaac
       61 cttgttcagc gaggagctgc agtccgcgcc gggttcggtc agccaggtcc gcgaatgcgc
      121 ggcggagctc acgcgcttcg ccaaggctcg cggcgtcgcg acgatcctga tcggacacgt
      181 gacgaaggag gggacgctgg cggggccgcg ggtgctcgag cacatggtgg acacggtgct
      241 ctatttcgaa agcgacgtcg gcagccggtt tcggatcgtg cgcgccgtga agaatcgctt
      301 cggtgccgcg aacgagatgg gtttcttcgt gatgggcgag gacggatttc gcgaggtcaa
      361 gaatccttcc gcgatatttt tggcccgcca cggctcaccg gtccccggca gcgtgacgct
      421 cgtgacccgc gaaggaacgc gtcccgtgtt ggtcgaggtg caggcgctcg tcgatcgaac
      481 gcaggcacaa tcgccgcgcc ggctcggtca aggattcgac agtcaacgtc tcgggttgct
      541 gctcgcggtg ttgcatcgcc attgcggctt cgcgtccgcc gacagcgatg tgttcgcgaa
      601 cgtcgtcgga gggctgcgcg tcggcgaaac ggcggcggat ctggccgtcg cgctcgccgt
      661 cgtctcgagc ctgacggagc gccccgtggc gcaggatctc gtcgtgttcg gcgaaatcgg
      721 cctgaccggc gagattcgcc ccgtgccgtt cggcgaggag cgcctcgccg aggccgagaa
      781 gcacggcttc aagagggcgg tgatcccgcg agcgaatacg ccgcgtcgtg cgctcggtat
      841 cgaggtcctg ccggtcgatc gcttgagtga tgcgctcaag ctcgtgcacg cggcgtagcg
      901 cgatcttcaa gccgccgctt tcggcggcgg cgccgagcta ggcgcatata cgcgaacgcg
      961 cgcgatgccg tgctcggtcg tctcgaggat ttctatcgga tagtctgcga ccgtgacgct
     1021 cgtgccggac tccggaatcg tcgcgagctg ttcgacgatc aggccgttca aggtcttcgg
     1081 gccatcggtc ggcaggttcc agttcatcac gcggttcagc tggcgcacgt tcgcgctcgc
     1141 gtcgacgaca tagctgcgct cgctctcctt cgtgacgccg aggtcgaccg gggtggcatc
     1201 ccggtccagc tcgccgacga gctcgttcac gatgtcctgc gtcgtgatca gaccctgcac
     1261 gtcgccgtac tcgtcgacga cgaacgccga ccggcgctga tgttgctgga aattcaacag
     1321 ctgcttgttc aacggtgtgc tttcggggac gaagtacggc tcgcgaatcc gctcgagcag
     1381 caatgcctgg gtcagctcgc ctttcgcgag ctcgggcagc aggtcgcgaa cgcgggtcac
     1441 gccgatgatg ttgtcgatat cctcgcgata aaccggcagc cgatcgtgag ggctggtctg
     1501 gatcgttgcg aggttctgtt cccacggttg gtcgagatcg agaccgatga tctcctggcg
     1561 cgggaccatg atgtcgtcga ccgtgattgc gtcgaggtcg aggatgctca gcagcatgcg
     1621 ttgatgacgt cgggggacca tcactcctgc ctccgcgacg acggtgcgaa gctcctcggc
     1681 gctcagcgag tgcgaggcga tcaggtccgc gcgcacgccg aggaggcgaa gcgtgccgtt
     1741 cgccaccaag ttcaggaccc aaacgatcgg ataggcgatt ttcaggagcg ggtagtagat
     1801 caacgcggcc ggcagcgcga cgcgcgccgg gtgaagagcg ccgatcgtct ttggcgcca
//
LOCUS       DATCUD010000534         1974 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76442, whole genome shotgun sequence.
ACCESSION   DATCUD010000534 DATCUD010000000
VERSION     DATCUD010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1974)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1974)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1974
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76442"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VIQ99_07825"
     CDS             complement(<1..732)
                     /locus_tag="VIQ99_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009542736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY9183093.1"
                     /translation="MCLPTPDAGIVARRASIVRALKGLVAANNVIDEDLRLAAYETDA
                     LTAYRQRPLAVALPETTAEVAAILAFAHREGVKVVPRGAGTSLSGGAVPAADAIVVGL
                     GKFNKILEIDYANRCVVAQSGVTNLAISHAVAGEGFYYAPDPSSQIACTIGGNVAENS
                     GGVHCLKYGLTTNNVLGVELVTPQGEVVRLGGKHLDSGHYDLLGLTVGSEGLIGIVTE
                     VTVRILKRPQTARALLIGFDAVESAG"
     gene            819..1292
                     /locus_tag="VIQ99_07830"
     CDS             819..1292
                     /locus_tag="VIQ99_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007225313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2721 domain-containing protein"
                     /protein_id="HEY9183094.1"
                     /translation="MSSIEAVAGVIQLAIAPVFLIAGIATLISVFSTRLGRIVDRARV
                     IERRIPLAKHDEQRALLRAEASALWRRIAIINWAIRLCVSSALAICLVIVTLFVGEYV
                     VLDITALIAVLFVAAMILLVSGLVLLLREVSVATKHMRQGMEVALEGGTWDPPAR"
     gene            complement(1297..>1974)
                     /locus_tag="VIQ99_07835"
     CDS             complement(1297..>1974)
                     /locus_tag="VIQ99_07835"
                     /inference="COORDINATES: protein motif:HMM:NF014910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9183095.1"
                     /translation="FSRQREVPFYSNIFKFYGPEEVVRAQWDYTKRRLASIPGARARE
                     GAFYRFPITEEQKATVRDPQDLGIPTLETFSIGARSNFAPVTRGHLGFSPVIPMTGEA
                     VIESQRVFQRVLQEFGTDVALLVFPQSYHPRTLVILCMFYVLADVASNQAVRRTFERL
                     VEVAAEHGWGEYRTHTAFMDQCAAAYSFNDHALLKLHQTIKDAVDPNGILSAGRYGIW
                     PKHLRDA"
BASE COUNT          321 a          664 c          644 g          345 t
ORIGIN      
        1 gccggccgat tccacggcgt cgaatccgat caatagcgcc ctcgccgtct gcggccgctt
       61 caggattcgt accgtgactt cggtgacgat gccgatcaga ccctccgagc cgacggtgag
      121 cccgagcaag tcgtagtgcc cactgtcgag atgcttgccg ccgagccgca cgacctcgcc
      181 ttgcggcgtc acgagctcga cgccgagcac gttgttcgtc gtcaggccgt acttcaggca
      241 atgcacgccg cccgagttct cggcgacgtt gccgccgatc gtgcacgcga tctggctcga
      301 cgggtccggc gcgtagtaga acccctctcc cgccacggcg tggctgatcg cgagattcgt
      361 cacgccgctc tgcgcgacca cgcatcgatt cgcgtagtcg atctcgagga ttttgttgaa
      421 cttgcccaat ccgacgacga tcgcgtccgc ggccgggacc gcgccgcccg agagcgacgt
      481 gccggcgccg cgaggcacga ccttcacgcc ttcgcgatgc gcgaacgcga ggatcgccgc
      541 gacctccgcc gtcgtttcgg gcagcgcgac cgcgagtggc cgttgccgat acgcggtcag
      601 cgcgtcggtc tcgtaggccg cgagacgcaa gtcctcgtcg atcacgttgt ttgcggcgac
      661 gagccccttc agtgcgcgca cgatgctcgc gcgccgcgcg acgatgccgg catcgggtgt
      721 aggcaggcaa atcatggccg cgattagaca ccaaaactcg cgcgacggta tacgcttggg
      781 gtcccgcgta cgtctaccac gcgcccgagg aggtcctcat gagctcgatc gaagccgtcg
      841 ccggcgtgat tcaactcgcc atcgcgcccg tgttcctgat cgccggcatc gcgacgctga
      901 tcagcgtgtt ctcgactcga ctcggccgca tcgtcgatcg tgcgcgcgtc atcgagcggc
      961 ggatcccgtt ggcgaagcac gacgagcagc gagcgctgtt gcgcgccgag gcgtctgcgc
     1021 tgtggcggcg gatcgcgatc atcaactggg cgattcggct ttgtgtcagc agcgcgctgg
     1081 cgatctgcct cgtgatcgtg acgctgttcg tcggcgagta cgtggtcctc gacatcacgg
     1141 cattgatcgc ggtgctgttc gtcgccgcga tgatcctgct cgtctccggg ctcgtgctgt
     1201 tgctgcgcga ggtcagcgtc gcgacaaaac acatgcgcca aggcatggag gtcgcgctcg
     1261 agggcggaac gtgggacccc ccggcgcggt agctcgctac gcgtcgcgca agtgcttcgg
     1321 ccagatcccg tagcgcccgg ccgacaagat gccgttcgga tcgacggcgt ccttgatcgt
     1381 ctgatgcagc ttcaagagcg cgtgatcgtt gaacgagtac gcggccgcgc actggtccat
     1441 gaacgccgtg tgcgtgcggt actcgcccca accgtgctcg gccgcgactt cgaccagtct
     1501 ctcgaacgtg cggcgcacgg cctgattcga cgcgacatcc gctaagacat aaaacatgca
     1561 cagaatcacg agcgtgcgcg gatggtacga ctgtgggaac accagcagcg cgacgtcggt
     1621 gccgaactcc tgtagcacgc gctggaatac gcgctgcgac tcgatcacgg cctcgcccgt
     1681 catcgggatc acgggcgaga acccgagatg gccgcgcgtg accggcgcga agttcgagcg
     1741 cgcgccgatc gagaacgttt ccagcgtcgg gatgccgaga tcctgcggat cgcgcacggt
     1801 cgccttctgc tcctccgtga tcgggaaacg atagaacgcg ccctcgcgcg cacgcgcgcc
     1861 cgggatcgac gcgagccgcc gcttcgtgta gtcccactgc gcgcggacga cctcctcggg
     1921 gccgtagaac ttgaagatgt ttgagtagaa cggcacctcg cgctggcgcg agaa
//
LOCUS       DATCUD010000535         2577 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76449, whole genome shotgun sequence.
ACCESSION   DATCUD010000535 DATCUD010000000
VERSION     DATCUD010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76449"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..710)
                     /locus_tag="VIQ99_07840"
     CDS             complement(<1..710)
                     /locus_tag="VIQ99_07840"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183096.1"
                     /translation="MIKTPWRLAGRLLARDWRSGEVLVLLAALVVAVAAMSAVTFFTD
                     RVRAAVSQQASEALAADLRVESVDPLPESMRALAERHGLAAADAVSFRSVVLAGESTS
                     LAEIRGVTELYPLRGVVQVADELGGAPRDARGVPQRGEVWAEPSLLARLGATVGDQLE
                     VGSLRLRIAATLEFRPDEGWRFMEIAPTALVNREDVLASGLLAPGSIAEYAGLYAGDS
                     DALAAFRRELGALLRPQD"
     gene            836..1573
                     /locus_tag="VIQ99_07845"
     CDS             836..1573
                     /locus_tag="VIQ99_07845"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY9183097.1"
                     /translation="MRQTTASDDGPALPHLTAKAVLRHNYLFRGLSEAALERIAALAT
                     RRTYYKGSVVFSQGDVGDTLYGVASGRVRISASATDGREVFLNIMEPGDTFGEIAVMD
                     GLPRTASAVALDDTSLIAIQRSDFLAFLEREPRLAIHLLKLLCERLRWTSDLVEESAF
                     LAGPARLAKRLLILASLHGRAAGVGSLELRISQAELAHFLGISRQIVNQHLTDWRRHG
                     WVDTGRNQIVIRNTEALRAMIAEMASV"
     gene            complement(1583..1756)
                     /locus_tag="VIQ99_07850"
     CDS             complement(1583..1756)
                     /locus_tag="VIQ99_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183098.1"
                     /translation="MNKLRTFLAAALLTIPVFSLSASSLTTEAQVDGIASTPSVTGTC
                     YYYIGGRWWAFPC"
     gene            1965..2267
                     /locus_tag="VIQ99_07855"
     CDS             1965..2267
                     /locus_tag="VIQ99_07855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183099.1"
                     /translation="MSVSEDVLRLVRTVERLPSEDQDKILRMVDLLTLVPVRVQNKTQ
                     RMLRELLERQPNTKGECVAGVDDVLAYLERNAVAIPRARDVLARLDFGAVGKIRPS"
     gene            complement(2274..>2577)
                     /locus_tag="VIQ99_07860"
     CDS             complement(2274..>2577)
                     /locus_tag="VIQ99_07860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY9183100.1"
                     /translation="RGPPTRDVGTFVLRGKRLPVAICEPLAAAPTPLTENALAEFAAA
                     LAALRAANWDEAHRRFAALAAQHPDDGPSRYYAAVTSGYRRDPPRDWAGAIRLTTK"
BASE COUNT          464 a          884 c          819 g          410 t
ORIGIN      
        1 tcgtcctgcg gacgcagcaa tgcgccaagc tccctgcgaa acgcggccag cgcgtcgcta
       61 tcgccggcgt agaggccggc gtactcggcg atgctgccgg gagccaacaa gcccgaagcg
      121 aggacgtcct cgcgattcac cagagccgtc ggcgcgatct ccatgaagcg ccaaccctcg
      181 tcaggacgga actcgagcgt ggccgcgatc cgcaggcgca ggctaccgac ctcgagctga
      241 tcgccgaccg tcgccccgag ccgtgccagc aagctgggct cggcccagac ttccccgcgc
      301 tgcggcaccc cgcgcgcgtc ccgcggcgca ccgcccaatt cgtctgcgac ctgcacgacg
      361 ccgcgtaacg gatacaactc agtgacaccg cgtatctccg ccagcgacgt ggactcaccc
      421 gcgagcacca cgctgcggaa gctgacggcg tccgccgcgg cgagcccgtg ccgttcggcc
      481 agcgcacgca tcgactccgg cagcggatcg acggactcga cgcgcaggtc cgcggccagc
      541 gcttcactag cctgctgcga caccgcggct cggacgcgat ccgtgaaaaa cgtcaccgcg
      601 ctcatcgcgg ccacggcgac gacgagggcc gccaacagga ccaacacctc acccgagcgc
      661 cagtctcgcg ccaggaggcg ccctgccaac cgccatgggg tcttgatcac cgttgtcctc
      721 cgcgcgtcca catgcttggc attccgtagc ccgtacacga tactggcgtg aaattagagc
      781 ggcaaactat ccgcccgatg ccagcccgcc gataaccgat aaccgatagc cggacatgcg
      841 acagaccacc gccagcgacg acggaccggc gcttcctcac ctgaccgcga aggcggtctt
      901 gaggcacaac tatctgttta gaggcctctc cgaagccgcg ctggaacgta tcgcggcact
      961 cgcgacccga cgcacctact acaaaggcag tgtcgtcttt tcgcaagggg atgtcggcga
     1021 cactctttac ggagtcgcgt ccggcagggt gcggatcagc gcgagcgcga ccgacggccg
     1081 cgaagtattt ctgaacatca tggaacccgg cgatacgttc ggcgagatcg ccgtgatgga
     1141 cggcctgccg cggaccgcca gcgccgtggc gctcgacgat acgtctctga ttgcgattca
     1201 gcgcagcgac ttcttggcgt tcctggaacg cgagccacgg ctcgcgatcc atttgctgaa
     1261 gctgctgtgc gaacgcctgc gctggacgag cgacctcgtc gaggaatccg cgttcctcgc
     1321 gggacccgcg cggctcgcga aacgactgct gattctcgcg tcgttgcacg gccgcgcggc
     1381 cggggtcggc tccctcgagc tacggatctc gcaagccgag ctcgctcatt tcctcggcat
     1441 ctcgcggcag atcgtcaatc agcacttgac ggactggcgc cggcacggct gggtcgatac
     1501 cggacggaat cagatcgtga tccggaacac cgaggccctg cgcgcgatga tcgccgagat
     1561 ggcgagtgtg tgacccctgc tatcagcagg ggaacgccca ccagcgcccg ccgatgtagt
     1621 aatagcaggt acccgtgacg ctcggcgtcg acgcgatgcc gtcgacctgc gcttccgtcg
     1681 tcagcgagct cgcgctcaac gagaacaccg ggatcgtcaa caacgcggcg gcgagaaacg
     1741 ttcgcaactt gttcatgtct gattactccg tatcgattga gagactcatc ggtgctgtcg
     1801 caccgcggag cagagcctgg cgcctaagtc accggcgttc tgtcaacaag tcgacacaac
     1861 tcgtgttttt ttcctttttt gtgagaagtg tccggtacct gacacatgga ctcgctgggc
     1921 tctgctacac atgacagtcg ccattgccca atcgaggtat cgacatgtca gtctcagagg
     1981 acgtgctgcg cctggtgcgc accgtggaac ggctgccgag cgaggaccag gacaagatcc
     2041 tgcggatggt cgatttgctg acgctggtcc ccgtccgggt acagaacaag acgcagcgca
     2101 tgctgcgcga gttgctcgag cggcaaccga acacgaaagg cgaatgtgtg gccggcgtcg
     2161 acgacgtgct ggcctatctc gagcgcaacg ctgtggcgat accgcgcgcg cgcgacgtgc
     2221 tcgcccgact ggacttcggc gctgtcggca agatcaggcc gtcctaggcc gcgctacttc
     2281 gtcgtgagac gtatggcgcc ggcccagtcg cgcggcggat cgcgccgata gccggacgtg
     2341 acagcggcgt aatagcggct cggcccgtca tctgggtgct gtgccgccag cgcggcgaag
     2401 cgccgatgcg cctcgtccca attcgcggcc cggagcgcgg ccagcgcggc ggcaaactcc
     2461 gcgagcgcgt tctcggtaag cggcgtcggc gcggcggcga gaggctcgca aatggcgacc
     2521 ggcaagcgtt tgccgcgcag cacgaacgtg cccacatcgc gcgtgggcgg tccccgc
//
LOCUS       DATCUD010000536         4213 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_104488, whole genome shotgun sequence.
ACCESSION   DATCUD010000536 DATCUD010000000
VERSION     DATCUD010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4213)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4213)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4213
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104488"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1413)
                     /locus_tag="VIQ99_07865"
     CDS             complement(<1..1413)
                     /locus_tag="VIQ99_07865"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEY9183101.1"
                     /translation="MLQRIHDSLSLGRWVVAILLGLIAITFIFWGVDFGMMGPATFAA
                     KVNGEDVSLDEFNNALQNRQNQYQQIYRSELPEELRRELRRSVVEDLVQDRALKQRVD
                     EQGYRVSDARVTQSIREIAAFQIDGEFSFDQYRGLLTNAGLTPAAFETQQRETLELGE
                     LTRGIVDSTFLTPAEFRRFIELYNQRREVAYALFDANTFAADVVIDDAAIAARYESNQ
                     ASYQTDETVDLEYVELALADVAATVEVTDEDLRAAYEEDRQRFETAEERRARHILFET
                     TDGEDAARTAAEAAEARLRAGEDFATLAAELSADAGTKAQGGDLGWMARGTLVGPFED
                     ALFALQVGETSAPVKSEFGYHIIRLDELRAGEVQPFEAVRDELAAETRTRLAEDDFFD
                     RVDRLSDAAFEAANELATVASEMQVPLKTAAGFSRSGDPSLFENSAPIVQAAFSEDLV
                     ESGRNSEVIELAEDHVVVVRV"
     gene            complement(1510..1586)
                     /locus_tag="VIQ99_07870"
     tRNA            complement(1510..1586)
                     /locus_tag="VIQ99_07870"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1550..1552),aa:Asp,seq:gtc)
     gene            complement(1603..1678)
                     /locus_tag="VIQ99_07875"
     tRNA            complement(1603..1678)
                     /locus_tag="VIQ99_07875"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1643..1645),aa:Val,seq:tac)
     gene            complement(1695..1967)
                     /locus_tag="VIQ99_07880"
     CDS             complement(1695..1967)
                     /locus_tag="VIQ99_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014994723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY9183102.1"
                     /translation="MNKAELVDAVANAANLSKADAGRAVDAVVNSITAALKKGEQVSV
                     VGFGTFGVKHRAARSGRNPRTGETISIAASNVPGFKAGKALKDAVN"
     gene            complement(2129..>4213)
                     /gene="lon"
                     /locus_tag="VIQ99_07885"
     CDS             complement(2129..>4213)
                     /gene="lon"
                     /locus_tag="VIQ99_07885"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020482926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEY9183103.1"
                     /translation="LAARFDLIPDHLSTDANIEARATLLKQKAMEAVELLPQVPPELG
                     PALQNIESPGGLADMIAGLIDIKPAEKQSILEALKIRERLDKVIELLTHRIEVLKLSK
                     EIGEQTQGKLDERQREYVLREQLKTIKKELGEDDTQTELDELRKAIADAQMPEDVEKQ
                     ASKELRRLEGMPDSSTEHSMVRTYLDWLVALPWAKVDAEAIDIAKARAILDADHYGLD
                     KVKRRILEYLAVRKLNAAGRSPILCFVGPPGVGKTSLGQSIARALGLKFVRASLGGVH
                     DEAEIRGHRRTYIGSMPGKIVQNLGKVKVRNPLFLLDEVDKMSMDFRGDPSSALLEVL
                     DPEQNSTFNDHYLEVDFDLSEVMFVCTANSLNIPAPLLDRMEVIRLPGYTEDEKLNIA
                     RRYLIPKQMRQNGLQDDELRVTDPAILDIVRYYTREAGVRNLEREIANICRKVVKQLL
                     LKPRKGTVKVDTENLSKLIGVRKFRYGRAEENDQVGQVTGLAWTEVGGELLTIEAAIV
                     PGKGKLIHTGQLGDVMQESIQAAMTVVRSRAAVLGLDEGFHLKSDVHIHVPEGATPKD
                     GPSAGIGMCAALVSALTKIPARSSVAMTGEITLRGEVLPIGGLKEKLLAAHRGGIETV
                     LIPADNEKDLAEIPKNIKDKLNIVPVKWIDEVFELALQQTPRPIRGETRVTPERDTPV
                     DDDETNEATLPH"
BASE COUNT          692 a         1399 c         1279 g          843 t
ORIGIN      
        1 aacgcgcacg acgacgacgt ggtcctcggc gagctcgatg acctcgctgt tgcgcccact
       61 ctcgacgaga tcctcgctga aggcggcttg cacgatgggc gcgctgttct cgaacaggct
      121 cgggtcgccg ctgcgcgaga aacccgcggc ggtcttcagc ggcacctgca tctcggatgc
      181 cacggtcgcg agctcgttgg cggcttcgaa agccgcatcg ctgagtcgat cgactcggtc
      241 gaagaagtcg tcttccgcca agcgcgtgcg cgtctctgcc gcgagctcgt cgcgcacggc
      301 ctcgaacggc tgcacctcgc cggcgcgcag ctcgtccaag cggatgatgt ggtagccgaa
      361 ctcgctcttg accggcgcgc tggtctcgcc gacctgcaac gcgaacaacg catcctcgaa
      421 cgggcctacg agggtgccgc gcgccatcca accgagatcg ccgccctgcg ccttcgtgcc
      481 ggcgtcggcc gagagctcgg ctgcgagcgt cgcgaagtcc tcgccggcgc ggagtcgcgc
      541 ctcggcggcc tcggccgcgg tgcgcgccgc gtcctcgccg tccgtggtct cgaacaggat
      601 gtgccgagca cggcgctcct cggcagtctc gaaacgctgg cgatcttcct cgtacgccgc
      661 gcgcaggtct tcgtccgtga cctcgaccgt ggccgccacg tccgcgagcg cgagctcgac
      721 gtactcgagg tcgacggtct cgtcggtctg gtagctcgct tgattgctct cgtagcgcgc
      781 ggcgatcgcg gcatcgtcga tcacgacatc cgcggcgaac gtgttggcgt cgaacagcgc
      841 gtaagcgacc tcgcgccgct gattgtagag ctcgatgaag cggcgaaatt cggcgggcgt
      901 caggaacgtg gaatcgacga tgcccctcgt cagctcgccg agctcgagag tctcgcgttg
      961 ctgcgtctcg aacgctgccg gcgtcagccc cgcgttcgtg agcagaccgc ggtactggtc
     1021 gaacgagaat tcgccgtcga tttggaacgc cgcgatttcg cgaatcgact gcgtcacgcg
     1081 cgcatcggac acgcggtaac cctgctcgtc gacgcgctgc ttcagcgctc tgtcctgaac
     1141 caagtcttcg accacggagc ggcgcaactc gcggcgcaat tcttcgggaa gctcgctgcg
     1201 atagatctgt tgatattggt tctggcggtt ttgcagggcg ttgttgaact cgtcgaggga
     1261 cacgtcctcg ccgttgacct tcgcggcgaa ggtcgcgggg cccatcattc caaaatcgac
     1321 gccccagaaa atgaacgtga tcgcgatcaa gccgagcagg atcgcgacga cccaacggcc
     1381 gagcgacaga gagtcgtgta ttcgttgcag catcgcgaga gccccaaaaa cacaaggaca
     1441 gatttacttc gggcgcacgc tagtagcatg ccaccccgaa agcaaatctg tccttgctgt
     1501 cagttcaaat ggcggagtgg acgggactcg aacccgcgac ccccggcgtg acaggccggt
     1561 attctaacca gctgaactac cactccggct ggtgcttact actggtgggt gctgagggga
     1621 tcgaaccccc gaccttcgcc ttgtaagggc gacgctctcc cagctgagct aagcacccca
     1681 gggacttgag ctggctagtt tacggcgtcc ttcaacgcct tgccagcttt gaaccccggc
     1741 acattgctgg ccgcaatgct gatcgtctca ccggtgcgcg gattccgtcc gcttcgcgcg
     1801 gcgcggtgct tcacaccgaa cgtgccgaag ccgaccacgg aaacctgctc acctttcttc
     1861 agcgccgccg taatgctgtt caccaccgcg tccactgcac gccctgcatc cgctttggag
     1921 aggttggccg cattcgctac tgcatcgacg agttccgcct tgttcattcg aatcccttac
     1981 acacgactgt gcgtcaaacg agttattcac caaacgtgcg gactcgcacg tctacccagg
     2041 atagtgtcgt ctcgaacttt tggccgccgc tcgaaacagc ggccacctta taccggtgga
     2101 ttttcgcgtg tcaactgaac gcggcgcgct aatgaggcag cgtcgcttcg ttcgtctcgt
     2161 cgtcgtcgac aggagtgtct ctttccggcg tcactcgcgt ctcgccgcga atcggtcgcg
     2221 gcgtttgctg tagcgccagc tcgaaaacct cgtcgatcca cttgacggga actatattca
     2281 acttgtcttt gatgttcttt gggatttccg cgagatcctt ttcgttgtcc gcgggtatca
     2341 acacggtctc gatgccgcct ctgtgagcgg cgagcaactt ctccttgagg ccgccgatcg
     2401 gcaacacctc gccgcgcaac gtgatctcgc ccgtcatcgc gacactggaa cgagccggaa
     2461 ttttcgtgag cgccgacacg agcgccgcgc acatgccgat gccggcggag ggaccgtcct
     2521 tcggcgtcgc accctccggc acgtgaatgt gcacgtcgga tttcaagtgg aacccttcgt
     2581 cgagcccgag caccgcggcg cggctccgca ccacggtcat cgccgcctgg atcgattcct
     2641 gcatcacgtc gccgagctgg ccggtgtgga tcaacttgcc cttgccgggc acgatcgcgg
     2701 cttcgatcgt cagaagctcg ccgccgacct ctgtccatgc gagtcccgtg acctgcccga
     2761 cctggtcgtt ctcctcggcg cggccgtaac ggaacttgcg cacgccgatc agcttcgaca
     2821 ggttttctgt gtcgaccttg accgtgccct tgcgcggttt cagcagcagc tgcttcacga
     2881 ccttgcggca gatgttcgcg atctcgcgct cgaggttgcg tacgccggct tcacgcgtgt
     2941 agtagcgcac gatgtccagg atcgcggggt cggtgactct gagctcgtcg tcttgcaggc
     3001 cgttctgccg catctgcttc gggatcaagt agcggcgcgc gatgttcagc ttctcgtctt
     3061 ccgtgtaacc gggcagccga atgacttcca tgcgatccag caacggcgcg ggaatgttca
     3121 agctattcgc ggtgcagacg aacatcacct cggagagatc gaaatcgacc tcgaggtaat
     3181 ggtcgttgaa cgtcgagttc tgctcgggat cgagcacctc gagcaatgcg gacgaaggat
     3241 cgccgcgaaa atccatcgac atcttgtcga cctcgtcgag caagaacaat ggattccgca
     3301 ccttcacctt gcctaggttc tgcacgatct tgcccggcat cgagccgatg tacgtgcggc
     3361 gatggccgcg aatctcggcc tcgtcgtgca cgccgcccaa gctcgcgcgc acgaacttga
     3421 gccccagcgc gcgcgcaatg ctctggccga gcgaagtctt gccgacgccg ggcgggccga
     3481 cgaagcacag gatcgggctg cggcccgccg cattcagctt gcgcaccgcg aggtactcga
     3541 gaatccggcg cttgaccttg tcgaggccgt aatgatcggc gtcgagaatc gcgcgcgcct
     3601 tcgcgatgtc gatggcttcc gcgtcgacct tggcccacgg cagagccacg agccagtcca
     3661 ggtacgtccg caccatcgag tgctcggtcg aagagtccgg catgccttcc aggcggcgca
     3721 gctccttcga cgcctgcttc tcgacgtcct cgggcatctg cgcgtcggcg atcgccttgc
     3781 gcagctcgtc gagctcggtc tgcgtgtcgt cctcgccgag ctccttcttg atcgtcttca
     3841 gctgctcgcg tagcacgtac tcacgctggc gctcgtcgag cttgccttgc gtctgctcgc
     3901 cgatctcctt cgacagcttc agcacctcga tgcggtgcgt gagcagctcg atgaccttgt
     3961 cgagtcgctc gcgaatcttc agcgcttcga ggatcgactg cttctcggcc ggcttgatgt
     4021 cgatcaggcc cgcgatcatg tcggcgagcc cgcccggcga ttcgatattc tgcagcgcgg
     4081 ggccgagctc gggcggcact tgcggcagca gctcgacagc ctccatggcc ttttgcttga
     4141 gcagcgtcgc gcgcgcctcg atgttcgcgt ccgtcgacag gtgatcgggg atcaaatcga
     4201 agcgcgccgc gag
//
LOCUS       DATCUD010000537         1786 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_26612, whole genome shotgun sequence.
ACCESSION   DATCUD010000537 DATCUD010000000
VERSION     DATCUD010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1786
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26612"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..1006)
                     /locus_tag="VIQ99_07890"
     CDS             complement(5..1006)
                     /locus_tag="VIQ99_07890"
                     /inference="COORDINATES: protein motif:HMM:NF023334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3426 domain-containing protein"
                     /protein_id="HEY9183104.1"
                     /translation="MLFTRCPECETTFRVTDEASKKASGQVRCGRCATVFNAYAELQD
                     SAKVGDPKLLSPVTEIPSEPLKPGQGAPAPASTTEARAANGDAAQGDDTDEAVADPAV
                     PQETAAAPSAAPNDDADEGPDLISAKEIDQVLTANVGAGLPPATPTWSTLGAHPVRGR
                     PSRWWGAAAALALLALLAQGLHHYRSEIAGHPTFGPWIQQAYGLVGTELTPSWDVHQY
                     EILDWVATAEPNSRGLGSLKITARIQNRGPLRQPYPAVQLRLKDRWEAAVSSRVFTPA
                     EYLPSDSPRGRLMSPGETARAEIEVVDPGPDAYGFELDVCIEVEASLVTCGTDEVFL"
     gene            complement(1036..>1786)
                     /locus_tag="VIQ99_07895"
     CDS             complement(1036..>1786)
                     /locus_tag="VIQ99_07895"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF018076.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEY9183105.1"
                     /translation="PLWPTVIVRASFLPDADLSPLCDLLRDSCSAVDLSVTGLEESAW
                     KRGLRQTVEARSIGRRLWLAPADDETGPADRTRIRLNMGLAFGTGAHPTTALCLEWLD
                     AHLIPGATVIDYGCGSGVLAIAALALGASRAWAVDNDSQALLATSANAALNGVSDRLF
                     VGAPESLPAVTVDVLVANILAAPLIELAPAFTACLKPEGALVLSGVLEHQAPRVAAAF
                     APHFGAFEIDVAQGWARLAARRNSVKRAQNR"
BASE COUNT          289 a          589 c          611 g          297 t
ORIGIN      
        1 cgcgttatag aaatacttcg tcggtaccgc aggttactaa tgatgcttcg acttcgatac
       61 aaacatcgag ctcgaagccg tacgcatcgg gaccaggatc gacgacttcg atctccgcgc
      121 gcgcggtttc accgggagac atcaatcgtc cgcgtggcga gtcgctcggc aaatactcgg
      181 cgggtgtgaa cacccgactg ctcactgccg cttcccaacg atccttgagg cgaagctgca
      241 cggccggata cggctgacgc agcggcccgc gattctgaat gcgcgcggtg atcttgagac
      301 tgccgaggcc gcgggagttc ggctctgcgg tcgcaaccca atcgaggatc tcgtactggt
      361 gcacgtccca gctcggggtg agctccgttc cgaccaggcc ataggcttgt tgaatccacg
      421 gaccgaacgt cggatgtccc gcgatctcgg accgatagtg atgcagcccc tgtgccaaca
      481 atgcgagcag cgcgagcgcc gcggcggctc cccaccaacg gctcggccgc ccccgcacgg
      541 ggtgtgcgcc gagcgtcgac caggtcggag tggccggagg caggccggcg ccgacgttcg
      601 cggtcagaac ctgatcgatc tctttggcgc tgatcagatc cgggccttca tcggcgtcgt
      661 cgttcggggc ggccgacgga gcagccgcgg tttcttgcgg gaccgcgggg tccgcaacgg
      721 cctcgtcggt atcgtcgcct tgggccgcgt cgccgtttgc ggcgcgcgct tcggtggtcg
      781 aagccggtgc cggagcgcct tgccccggtt tgagcggctc cgagggtatc tcggtcaccg
      841 gcgacagcaa tttcggatct cccaccttcg cggagtcttg cagctcggcg taggcgttga
      901 agacggtcgc gcagcgcccg cagcgcacct gaccgctcgc cttcttcgag gcttcgtctg
      961 tgacgcggaa ggtcgtctcg cattcggggc agcgcgtgaa cagcatggcg gccgcttcgt
     1021 tgtgacgcgg cgattctagc ggttctgcgc tcgtttaacc gagttccggc gtgccgccag
     1081 gcgagcccag ccctgagcca cgtcgatctc gaatgcgccg aaatggggcg cgaatgcggc
     1141 cgcgactcga ggcgcttgat gctcgagaac gccgctcaag accagcgcgc cctcaggctt
     1201 taggcacgcc gtgaatgctg gcgcgagctc gatcagcggc gccgcgagaa tgttcgcgac
     1261 gagcacgtcg accgtgacgg ccggcaacga ctccggagct ccgacgaaca ggcggtcgct
     1321 gacgccgttc aacgcggcgt tggcgctcgt ggccagcagc gcctgcgagt cgttgtcgac
     1381 ggcccacgca cgacttgcgc cgagtgccag cgccgcgatc gcgaggacgc cggacccgca
     1441 gccgtaatcg atcacggttg cgcctgggat cagatgcgca tcgagccatt cgagacacaa
     1501 ggccgtggtc ggatgcgcgc cggtgccgaa cgcgagcccc atgttcagcc ggattcgtgt
     1561 gcggtcagcc ggtccggtct cgtcgtccgc cggcgcgagc cagaggcgcc ggccgatcga
     1621 gcgcgcctcg acggtctggc gcaagccccg cttccaagcg gattcctcga gaccggtgac
     1681 gctgaggtcg acggccgagc acgagtcgcg gagcagatcg cagagcggcg agaggtccgc
     1741 gtcgggcaag aacgaggcgc gcacgatgac tgtcggccac aacggc
//
LOCUS       DATCUD010000538         3615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_26613, whole genome shotgun sequence.
ACCESSION   DATCUD010000538 DATCUD010000000
VERSION     DATCUD010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26613"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2682
                     /locus_tag="VIQ99_07900"
     CDS             <1..2682
                     /locus_tag="VIQ99_07900"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183106.1"
                     /translation="ISLSFSNLGGPEVLAEYYSTYGGRTYEDRIYKNLGEFYFDKLRY
                     NDAATVYDSFVERYPYHRVSPEFGMRVIGIYQAGDFPKLVVESKKSFATKYGLQSDYW
                     QHFDAAQRPEVLGYLKTNLHDLANHYHALYQEPGLTNEKSANYAEASVWYRAFLASFP
                     QDEQSPAINYQLADLLLENGAFGDAALEYERTAYAYAAHERAAAAGYAAVFAHREQLK
                     AASAEQQTELKRATIDSSLKFATTFDDHEHAAVVLGAAAEDLYSLEDYETGRGAARLL
                     LERYPAADATLRRTAWTIVAHSSFELADFTAAEPAYAEVLALTPAEDEARQALVDNLA
                     ASIYKQAEQANAAQDYQAAAGHFLRITERAPTSSIRPAAEYDAAAALMKLQDWTAAAS
                     VLDNFRAAFPDHELNREATKQLAFVYREDGDLSRSAAEYERVAGEATDPELQREALLS
                     AGELYEQAEVIDDALAVYERYVAAFPQPVDVAVETHSKVAEMYRTRGDDLRYHEHLAA
                     LVAADASAGGERTDRTRYLAAQAGLVLAQPSYAAFDAVQLVPPFEQNLARKRELMDAA
                     LDAFETLLEYEVGEVTTAATFHMAEIYSSFSSALLTSERPTDLSPAELAEYEDVLEEQ
                     AFPFEERAIEVHEANIDVMIAAGIYDRWVEQSFARLAALVPGRYAKDEQSIGLLGAIE
                     TFTYRSPGVAAPVATAAAAAEPEGRRSRAAAPKGPTIRLDVLAGAGFTITDEARVAPE
                     LRDRYLAAVGFLDQGLYERGVAELEAVVEQQPELANPHVDLGLAYGRTGRLDEAAASL
                     ERAIALSAAHPIAHQELGLIYRKQARFADARTQYERALALYPDFHLAHRNLAILCDLY
                     QRDFVCALEHYVAYQALVPDDGEVGIWIADVKSRAGQ"
     gene            2694..3002
                     /locus_tag="VIQ99_07905"
     CDS             2694..3002
                     /locus_tag="VIQ99_07905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183107.1"
                     /translation="MLTKLMLIGVAAAVAGLGVAQESAPAAQQTATPQPETKSMSGMS
                     ILGNQEAPKSLVIVPWKSSEIGNGIGVSRALDTRIRAVDKDVFLRELKYYAIRSGAEK
                     "
     gene            3174..>3615
                     /locus_tag="VIQ99_07910"
     CDS             3174..>3615
                     /locus_tag="VIQ99_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020413199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY9183108.1"
                     /translation="MDGIYAIVEFFVNGGIFMYPILLVFAVGAAIAIERWVTLTLLTK
                     RNQATWTQVQPLLGKRDFDKARELTANDGSTVAQLLNMGLERQGAVRRRDDLEIAMEE
                     CMMEILPQLEKRTGYVGLAANVATLLGLLGTIMGLIQAFTAVANA"
BASE COUNT          647 a         1173 c         1206 g          589 t
ORIGIN      
        1 atcagtctga gcttctcgaa cctcggcggc cccgaagtgc tggccgagta ctactcgacc
       61 tacggtggcc gcacgtacga ggaccgaatc tacaagaact tgggcgagtt ctacttcgac
      121 aagctgcgct acaacgacgc cgccacggtg tacgactcgt tcgtcgagcg ctatccgtat
      181 caccgcgtgt cgccggagtt cggcatgcgc gtgatcggta tctaccaggc cggcgacttc
      241 ccgaagctcg tcgtcgaatc gaagaagtca ttcgcgacca agtacggcct gcagagcgac
      301 tactggcagc atttcgacgc ggcgcagcgg cccgaggtgc tcggttacct caagacgaac
      361 ctgcacgacc tcgcgaacca ctatcacgcg ctctatcaag agccggggct tacgaacgag
      421 aagtccgcga actacgccga agcgtccgtg tggtaccgcg cgttcctcgc gtcgttcccg
      481 caggatgagc agtcgcccgc tatcaactat cagctcgcgg atctgttgct cgagaacggc
      541 gcattcggcg acgcggcgct cgagtacgaa cgcacggcgt acgcctacgc agcgcacgag
      601 cgtgcggcgg cggccggcta tgccgcggtc ttcgcgcacc gcgagcagct caaagcagcg
      661 agcgccgagc aacagaccga gctgaaacgc gcaaccatcg acagctcgct gaaattcgcg
      721 accacgtttg atgatcacga gcacgcggcc gtcgtgcttg gcgcggcagc cgaggacctc
      781 tattcgctcg aggattacga aaccggcagg ggcgccgcgc ggctgttgct cgagcgctat
      841 ccggcggccg acgcgacttt gaggcgcacg gcgtggacga tcgtcgcgca ctcttcgttc
      901 gagctggccg atttcacggc cgcggagccg gcgtacgccg aggtcctggc gttgacgccg
      961 gccgaggacg aggcgcggca ggcgctcgtc gacaatctcg cggcgtcgat ctacaagcag
     1021 gccgagcagg ccaacgcggc gcaggactac caagcggcgg ccggccattt cttgcgcatc
     1081 acggagcgcg cgccgacgtc gtcgattcgt ccggcggccg aatacgatgc ggccgcggcc
     1141 ctgatgaagc tacaggactg gactgcggcg gcctccgtgc tcgacaactt ccgtgcggcg
     1201 ttcccggatc acgagctgaa tcgcgaagcg acgaagcaac tcgcgttcgt ctatcgcgaa
     1261 gacggcgatc tgtcccgctc ggccgcggag tacgagcgtg tcgctggcga ggcgacggat
     1321 cccgagctgc aacgcgaggc gctgctgtcg gcgggcgagc tctacgagca ggccgaggtg
     1381 atcgacgacg cgctcgccgt atatgagcgc tacgtcgccg cgttcccgca gccggtcgat
     1441 gtcgccgtcg agacgcattc gaaggttgcc gagatgtatc gcacgcgcgg cgacgacttg
     1501 cgctatcacg agcatctcgc ggcgctggtc gcggcggacg ccagcgcggg cggcgagcgg
     1561 acggaccgca cccgttatct cgcggcgcag gccgggctcg tgctggccca gccgagctac
     1621 gcggccttcg acgccgtgca gctcgtgccg ccgttcgagc agaacctcgc gcgcaagcgc
     1681 gagctcatgg acgctgcgct cgacgcgttc gaaacgctgc tcgaatacga ggtcggcgag
     1741 gtcacgacgg ccgcgacgtt tcacatggcg gagatctact cgagtttcag cagcgcgctg
     1801 ctcacgtcgg aaagacctac ggatctgtcg ccggcggagc tggccgagta cgaggacgtc
     1861 ctcgaggaac aggcgttccc gttcgaagag cgcgcaatcg aggtccacga agcgaacatc
     1921 gacgtcatga tcgcggccgg catctacgac cgctgggtag agcagagctt cgcgcgtctc
     1981 gcggcgctcg tcccgggccg ctacgcgaag gacgagcaga gcatcgggtt gctcggggcg
     2041 atcgagacct tcacataccg ctcgcccggc gtggccgcgc cggtggcgac ggcggccgcg
     2101 gcagccgagc cggaaggtcg gcgctcgcgc gcggcagcgc cgaaggggcc cacgatcagg
     2161 ctcgacgtgc tcgcgggcgc cggcttcacg atcaccgatg aggcgcgcgt tgcgccggag
     2221 ctgcgcgacc gctacttggc ggccgtcggc ttcctcgatc aaggcctgta cgagcgcggc
     2281 gtggccgagc tcgaagccgt ggtcgagcaa cagccggagc ttgcgaaccc gcacgtcgat
     2341 cttgggctag cgtacggccg cacgggccgc ctcgacgaag cggccgccag ccttgagcgg
     2401 gcgatcgcgc tgagcgcggc tcatccgatc gcgcaccagg agctcgggct gatctaccgc
     2461 aagcaggcgc gttttgccga cgcgcgtacg cagtacgagc gggcgctggc cctgtatccc
     2521 gattttcatc ttgcgcaccg caacctggcc attctctgcg acttgtatca gcgggatttt
     2581 gtctgcgccc tcgagcacta cgttgcgtac caagcgctcg tgcccgacga cggcgaggtc
     2641 ggcatatgga tcgccgacgt gaagtcgcgc gcgggccagt aggaggagca ctgatgctga
     2701 cgaagctcat gttgatcgga gtcgccgccg ccgtggcggg cttgggtgta gcgcaagagt
     2761 cggcgccggc ggcgcaacag acggccacgc cgcagccgga gaccaagtcg atgtccggca
     2821 tgtcgatctt gggcaatcag gaggcaccga aatcgctcgt gatcgtgccg tggaagagct
     2881 ccgagatcgg caacggcatc ggcgtgtcgc gcgcgctcga tacgcgaatc cgcgccgtcg
     2941 acaaggacgt gttcctgcgc gagctcaagt actacgcgat tcgttcgggc gccgagaagt
     3001 aggcccactc tcgcttatcg tttatgtgaa acagatcgtc gccagacggc gacgcaatgt
     3061 tgtaggcgcg caatcgcttt acgaggagtc cgtcacgctt cagccatcac cacgcgacct
     3121 aagctagtcg cgattttcgc acgtcgcaat ttgaccacta gagggattcg gatatggacg
     3181 gcatctacgc aatcgtcgag ttcttcgtca acggcggaat cttcatgtac ccgatcttgc
     3241 tcgtgttcgc ggtcggcgcc gcgatcgcga tcgagcgatg ggtcacgctg actctgctga
     3301 cgaaacgcaa tcaagcgacg tggacgcagg tccagccgct gctcggtaag cgggacttcg
     3361 ataaagcgcg agagctgacc gcgaacgacg gctcgaccgt ggcgcaactc ctcaacatgg
     3421 gcctcgagcg tcaaggcgcc gtgcggcgcc gcgacgacct tgagatcgcg atggaggagt
     3481 gcatgatgga aattctgccg cagctcgaga agcgcaccgg ttacgtcggc ctcgccgcca
     3541 acgtcgcgac gctgctcggc ctcctcggca cgatcatggg cctgattcag gcgttcaccg
     3601 ccgtggcgaa cgcga
//
LOCUS       DATCUD010000539         3040 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69377, whole genome shotgun sequence.
ACCESSION   DATCUD010000539 DATCUD010000000
VERSION     DATCUD010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69377"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VIQ99_07915"
     CDS             complement(<1..297)
                     /locus_tag="VIQ99_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015724680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183109.1"
                     /translation="MMQLSGICRDYAVGTETVHALAHVDLTIRGGEYVSIMGPSGSGK
                     STLLNVLGLLDRPTSGTYRLKGEDVSHLDDDALAAHRQQHIGFIFQFFHLIPRLT"
     gene            complement(316..1443)
                     /locus_tag="VIQ99_07920"
     CDS             complement(316..1443)
                     /locus_tag="VIQ99_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005224681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9183110.1"
                     /translation="MKRIAVIAALVLAGLTVAWYVMRPVPVAITLVTAERGPVAATVA
                     NTRAGTVDACRRAGLSPASGGQIANLPVVDGEHVAEGQLLLELWNEDVKAELTLAERD
                     ARAARSRAREVCVTAAVARRDAERLMKLRDERLASEEAADQAEGRAESTAAACTAAED
                     ATRVADARVDVTRAHLERTQLHAPFAGVIAEINGELGEFVTPSPVGIPTPPTVDLIDA
                     SCLYISAPIDEVDAPRIREGLPARISLDAFPDRVFPGHVRRVAPYVLDQEKQARTVEI
                     EAEFENPEGTGLLAGYSADVEVVLEERDDTLRLPTSVILPDKTVYVLDEASGRIALRR
                     IETGIANWEFTEILNGVAAGDRVVSSIDREGVVDGALVVQE"
     gene            complement(1501..2037)
                     /locus_tag="VIQ99_07925"
     CDS             complement(1501..2037)
                     /locus_tag="VIQ99_07925"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEY9183111.1"
                     /translation="MLVRRRHLLVGSLGAAALGSTLGRIAGATAPEAHRLSFYHIHTA
                     ERLTVTYREHGDLIPEALTEISHYLRDFRTEQSHEIDVALLDTLHDLFTTFDGRGNFE
                     VISGYRSPSTNAALRHVTSGVAENSLHIQGRAIDVRLTSAKTTQLRDAAKALQRGGIG
                     YYAESNFVHLDTGAFRAW"
     gene            complement(2115..3038)
                     /gene="trxB"
                     /locus_tag="VIQ99_07930"
     CDS             complement(2115..3038)
                     /gene="trxB"
                     /locus_tag="VIQ99_07930"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018952823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEY9183112.1"
                     /translation="MIIGSGPAGYTAAVYAARAALSPVIITGIEVGGQMTTTTDVDNW
                     PGDDQGVQGPELMERMKRHAERFGTKLIYNQVDRVELSKRPFRLFCGNDEYTCDALIV
                     ATGASAKYLGLPTEEAYKGRGVSACATCDGFFFRNQPVAVIGGGNTAVEEALYLSNIA
                     SRVTVVHRRDRFRAERIMIDKLLERSRTGNVDILFDHVLDEVVGDDRGVTGVRLKHAK
                     TSAPRNVDVQGVFIAIGHTPNTSVFKGQLEMEGGYIITRTGRRGLATATSVEGVFAAG
                     DVADPIYRQAVTSAGSGCMAALDAERFLTEK"
BASE COUNT          491 a          986 c         1016 g          547 t
ORIGIN      
        1 ggtcaggcgc ggaatcaaat gaaagaactg gaagatgaag ccgatgtgct gctggcgatg
       61 cgccgcgagc gcgtcatcat cgagatgaga gacgtcttcg cctttgagtc gataggttcc
      121 ggacgtaggg cggtcgagca ggccgagcac gttcagcagc gtcgacttcc ccgagcccga
      181 cgggcccatg atcgagacgt actcaccgcc gcggatcgtc agatcgacgt gcgcgagcgc
      241 atggactgtc tccgtgccga ccgcgtagtc gcggcagatt ccggagagct gcatcatgat
      301 cgtgggccgc ccgcgctatt cctgcacgac gagcgcgccg tcgacgacgc cctcgcggtc
      361 gatcgagctc acgacgcggt cgccggccgc aacgccgttc aggatctcgg tgaactccca
      421 gttcgctatg ccggtctcga tgcgacggag ggcgattctg ccgctcgctt cgtcgagcac
      481 gtagacggtc ttgtcgggca ggatcacgga ggtcggcaag cgcaacgtgt cgtctcgttc
      541 ctcgagcacg acctcgacgt cggcgctata gccggcgagt agtcctgttc cctcggggtt
      601 ctcgaactcg gcttcgatct cgaccgtgcg cgcctgcttt tcctggtcga gcacgtacgg
      661 cgcgacgcgg cgcacgtggc ccggaaacac ccgatccgga aatgcgtcga ggctgatacg
      721 tgcgggcaag ccctcgcgga tgcgtggcgc gtcgacctcg tcgatcgggg cgctgatgta
      781 gaggcacgag gcgtcgatca ggtcgacggt cggcggcgtc ggaatgccga cgggcgaggg
      841 cgtcacgaac tcgccgagct cgccgttgat ctcggcaatg acgcccgcga acggcgcgtg
      901 aagctgcgtg cgctcgagat gcgcgcgcgt tacgtcgacg cgcgcgtcgg cgacacgcgt
      961 ggcgtcctcg gccgcggtac acgcggccgc agtcgattcg gcgcggccct ccgcttgatc
     1021 cgcggcctcc tcggacgcga gccgctcgtc gcgcaatttc atgagccgtt ccgcgtcgcg
     1081 cctcgcgacg gccgctgtca cgcacacttc gcgcgcgcga gaccgcgccg cacgcgcgtc
     1141 gcgctcggcg agcgtgagct cggccttcac atcctcgttc cagagctcga gcagcagctg
     1201 gccttctgcg acatgctcgc cgtcgacgac gggcaaattc gcgatctgtc ctcccgaggc
     1261 cggtgatagc cccgcgcgtc ggcacgcgtc cacggtgccg gcgcgcgtgt tcgcgacggt
     1321 ggcggccacg ggaccgcgtt ccgctgtgac gagagttatc gcgacgggca ccggtcgcat
     1381 gacgtaccaa gcgacggtca gtccggcgag cacgagcgcc gcaatgacgg cgatgcgctt
     1441 cataagcgaa tgtctctggg ggaatcgccg ccgcagtcta gcggatgcgg cgagcagcga
     1501 ctaccaggcg cggaacgccc cggtgtccaa gtgcacgaaa ttcgactcgg cgtagtaacc
     1561 gatgccgccg cgctgcagcg cttttgcggc gtcgcggagc tgtgtcgtct tcgcactcgt
     1621 gaggcgcacg tctattgcgc ggccttgaat gtgcaagctg ttctcggcca ctccgctcgt
     1681 cacgtgccga agcgcggcgt tcgtgctcgg ggagcgatag ccggaaatca cttcgaagtt
     1741 gccgcggccg tcgaacgtcg tgaacagatc gtgcagcgtg tcgagcagcg caacgtcgat
     1801 ttcgtggctc tgctcggttc gaaagtcgcg caggtagtga ctgatctcgg tgagggcttc
     1861 ggggatcaag tcgccgtgct cgcgatacgt gaccgtgagc cgctcggcgg tgtgaatgtg
     1921 gtaaaaggac agccgatgtg cttcgggcgc cgtggcaccc gcgattcggc cgagcgtgct
     1981 gcctaacgcc gctgcaccga gcgatcccac tagcaagtgg cgtcgtcgta cgagcatgga
     2041 gctcctccca agcgttggag catgatcggg tatcagcgtg ccaaaaactc cgtaccgggt
     2101 ctcattatga cggctcattt ttcagtcagg aagcgctctg catcgagcgc cgccatgcat
     2161 cccgaccctg cggacgtgac tgcctgccgg tagatcggat cggcgacatc gcctgctgcg
     2221 aacacgcctt ctacgctggt tgcagtggcg agcccgcgtc tccccgtgcg cgtgattatg
     2281 tagccacctt ccatctcgag ctggcccttg aagacggacg tgttcggtgt atgaccgatc
     2341 gcgatgaaca cgccctgcac gtcgacatta cgcggagcac tcgtcttcgc gtgcttcaat
     2401 cgcacgcccg tgacgccgcg gtcgtcgccg acgacctcgt cgagcacatg gtcgaatagg
     2461 atgtcgacgt tgccggtgcg gctgcgctcg agcagcttgt cgatcatgat tcgttcggcg
     2521 cggaaccgat cgcgacggtg cacgacggtg acgcgcgagg cgatgttcga gaggtagagg
     2581 gcctcctcga cggccgtgtt gccgccgccg atgaccgcga cgggttgatt gcggaagaaa
     2641 aagccgtcgc aggtcgcgca cgcggacacg ccacggccct tgtacgcttc ctcggtcgga
     2701 aggccgagat acttcgccga cgctccggtc gcgacgatca gcgcgtcgca cgtgtactcg
     2761 tcgttgccgc agaacaatcg gaacggccgc ttcgagagct cgacgcgatc gacctggttg
     2821 tagatcagct tcgtgccgaa gcgctcggcg tgccgcttca tgcgctccat cagctccggc
     2881 ccctggacac cttgatcgtc gccgggccag ttgtcgacgt ccgtcgtggt cgtcatctgt
     2941 ccaccgacct cgatgcccgt gatgatcacc ggcgagagcg ccgcgcgcgc cgcatagacg
     3001 gcggccgtgt acccggccgg gcccgagccg atgatgatga
//
LOCUS       DATCUD010000540         2314 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40818, whole genome shotgun sequence.
ACCESSION   DATCUD010000540 DATCUD010000000
VERSION     DATCUD010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2314
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40818"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            109..717
                     /gene="mog"
                     /locus_tag="VIQ99_07935"
     CDS             109..717
                     /gene="mog"
                     /locus_tag="VIQ99_07935"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011351366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HEY9183113.1"
                     /translation="MPTTTPDRPLKVGLVSISDRASTGVYKDEGLPALKEWLGKAIAS
                     TWDAEERLIPDEQPVIESVLAELVDVRGCDLVFTTGGTGPARRDVTPEATLAVADKVM
                     PGFGEQMHQISLHYVPTAILSRQVAVVRKRALIVNLPGQPKSIRETLEGVKGADGAQL
                     VHGIFAAIPYCIDLIGGPYIETDDGVVRAFRPKSAQRPKAQP"
     gene            714..1379
                     /locus_tag="VIQ99_07940"
     CDS             714..1379
                     /locus_tag="VIQ99_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006463578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEY9183114.1"
                     /translation="MSEGLETVEIQTGPNPAATIVWLHGLGADGNDFVPVVDELDLAG
                     TAVRFVFPHAPAMPVTINGGMVMRAWYDVLSADLERRADERGVRASQRLVEALLERES
                     SRGIPAGRIVLAGFSQGGAIALQTGLRHPEPLAGVLALSCYVPLAASLEAERTDANRG
                     VPIFLAHGVDDEIVPVGAGRRSRELLARLGYNVEWHEYAMPHSVCMEEIGDLGAWLRR
                     VLS"
     gene            1394..2080
                     /locus_tag="VIQ99_07945"
     CDS             1394..2080
                     /locus_tag="VIQ99_07945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183115.1"
                     /translation="MQRALFIAVAVLATALAGIALWVYLSLDHLVKRAIEHYGSEILQ
                     ATVSVDRVKLAPVDGTGELRSLVIGNPKGFRSPHAATVGTIELQVDPATVTKDVVLVR
                     RVVVLSPSITYEPGSRGSNFDALQRNVERYVGTDRQAAKPSGGRKLIVERLTIKGARV
                     TYAPQVASGKATLSFNLPDIQLANVGKSRGGVTPGELAKIVVDALVARMADAMGRAAI
                     QRGIGTLLGR"
     gene            complement(2102..>2314)
                     /locus_tag="VIQ99_07950"
     CDS             complement(2102..>2314)
                     /locus_tag="VIQ99_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183116.1"
                     /translation="SLDVETGILLNPSAPDGEVHVLVRAGVHAPGQSLSFDLNGRHIV
                     LLPVGVPERRSDYELLRCRHLVRDAA"
BASE COUNT          356 a          790 c          824 g          344 t
ORIGIN      
        1 tgcggtgagg ccgccgcggc atttccgcga actctttcag ctcgtcaagg ccgcgctcgc
       61 cacacgcgag tcggctgccg acgagcgcgc acccctgtag accacgacat gccgacgacc
      121 actccggacc gcccgctcaa ggtgggcctc gtatcgatca gcgaccgcgc ctccaccggt
      181 gtgtacaagg acgaaggtct gcctgcgctc aaggagtggc tcggcaaggc gattgcctcg
      241 acctgggacg cggaggaacg gctgattccc gacgagcagc cggtgatcga atcggtgctc
      301 gccgagctgg tcgacgtgcg cggctgcgac ctggtgttca ccacgggcgg caccggcccg
      361 gcgcggcgcg atgtcacgcc ggaagcgacg ctagcggtcg ccgacaaggt gatgcccggc
      421 ttcggcgagc agatgcacca gatcagtctg cactacgtcc cgacggcgat cctctcgcgc
      481 caggtcgcgg tggtgcgcaa gcgcgcgctg atcgtcaatc ttcccggcca gccgaagtcg
      541 atccgcgaga cgctcgaggg cgtgaagggc gcggacggcg cgcagctggt gcacgggatc
      601 ttcgccgcga tcccctactg catcgacctc attggcggtc cctatatcga gactgacgac
      661 ggggtggtga gggcgttccg gccaaaatcg gcgcaacggc ccaaagcgca accatgagcg
      721 agggcctgga gacggtcgag atccagaccg ggccgaatcc tgcggcgacc atcgtctggc
      781 ttcatggtct cggcgccgac gggaacgact tcgtgcccgt cgtcgacgag ctcgacctcg
      841 ccggcacggc cgtccgattc gtcttcccgc acgcgccggc gatgccggtg acgatcaacg
      901 gcgggatggt catgcgcgcg tggtacgacg tcctgagcgc ggatctcgag cgccgcgccg
      961 acgagcgcgg agtgcgcgcg tcgcagcgtc tggtcgaggc gctccttgag cgcgagagct
     1021 cgcgcgggat ccccgccggg cggatcgtgc tcgccggctt ctcgcagggt ggcgccatcg
     1081 ccctgcagac cggcctgcgc cacccggagc ctctcgccgg cgtgttggcg ctctcgtgct
     1141 acgtgccgct cgccgcgtcg ctggaggccg aacgcaccga cgcgaaccgc ggcgtgccga
     1201 tctttctcgc acacggggtc gacgacgaga tcgtcccggt cggggccggg cggcgctcgc
     1261 gcgaactcct cgcccggctc ggctacaacg tggagtggca cgaatacgcg atgccgcatt
     1321 cggtctgcat ggaagagatc ggcgatctcg gcgcgtggct gcgccgcgtg ctcagctgag
     1381 cacgcgccgg cgcatgcaac gcgccctttt catcgccgtc gcggtgctcg cgaccgccct
     1441 ggcgggcatc gccttgtggg tgtacctctc gctcgaccac ctcgtgaagc gcgcgatcga
     1501 gcactacggc agcgagattc tccaggcgac cgtgtcggtc gatcgagtga agctcgcgcc
     1561 cgtcgacggc acgggcgagc tgcgcagcct cgtgatcggc aatccgaagg gtttccgttc
     1621 cccccacgcg gcgacggtgg ggacgatcga actgcaggtc gatccggcca cggtgacgaa
     1681 ggatgtggtg ctggtgaggc gggtcgtcgt gctatcgccg tcgatcacct acgagccggg
     1741 ctcgcgcggc agcaacttcg acgcgttgca gcgcaacgtt gagcgctacg tgggcaccga
     1801 caggcaggcg gcgaagccgt ccggcggccg caagctgatc gtcgaacggc tcacgatcaa
     1861 gggtgcgcgg gtgacctacg cgccgcaagt cgcgagcggc aaggcgacgc tgtcgttcaa
     1921 cctgcccgac atccagctcg cgaacgtcgg caagagtcgc gggggcgtga cgccgggcga
     1981 gctcgcgaag atcgtggtcg acgcgctggt ggcacgcatg gccgatgcga tgggccgcgc
     2041 cgcgatccag cgcgggatcg ggacgctgct agggaggtag cgtaccgctg cggcgcggcg
     2101 ctcaagccgc gtcgcgcacc aggtggcggc agcgcaggag ctcgtagtcg ctccgccgct
     2161 cgggcacgcc gaccggcagc agcacgatat ggcggccgtt caggtcgaag gacaggctct
     2221 gccccggcgc gtggacgccg gcgcgaacca gcacatgaac ctccccgtcg ggcgcgctcg
     2281 gattcaggag gatccccgtc tccacgtcga ggct
//
LOCUS       DATCUD010000541         1963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19573, whole genome shotgun sequence.
ACCESSION   DATCUD010000541 DATCUD010000000
VERSION     DATCUD010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19573"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..247
                     /locus_tag="VIQ99_07955"
     CDS             <1..247
                     /locus_tag="VIQ99_07955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017876945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEY9183117.1"
                     /translation="AWLQQTVASPPAERAARLTRWAEAPAARAAHPREEHLLPLMVAA
                     GAALDDAGECPYREENVYGGITVSSFRFGAAKAPARA"
     gene            complement(258..863)
                     /locus_tag="VIQ99_07960"
     CDS             complement(258..863)
                     /locus_tag="VIQ99_07960"
                     /inference="COORDINATES: protein motif:HMM:NF028004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HEY9183118.1"
                     /translation="MSRLSRSKVIAIGVVGALALAASAQPPAADGPEYENGTDLVLPA
                     DYRSWPFIGAGLGMTYDGERGTQAASPDNPRFTHAFVNPSAYRHFMSTGSWPDGTVFM
                     LEFRASQSEGSINRSGRFATQLTFLEAEVKDSRFPDGWAFYAFGPGNNLAKAARPLAG
                     AEAAPCVECHSEHAAVERTFVQFYPHLLEVARARGTLKPGF"
     gene            1036..1890
                     /locus_tag="VIQ99_07965"
     CDS             1036..1890
                     /locus_tag="VIQ99_07965"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183119.1"
                     /translation="MNSRVIAGFLGAAVIVLAPCAQAQFGSEPSKLEIIKVRDDIYVI
                     SNVAVPGLVTALVTNEGVVLVDDKFEIDHDNIMAMLKTVTNQPVKFVINTHYHGDHSG
                     GNAKLQALGTLAVASTEARASMVAANQSGQPNITVGDHAEIHLGGKTVEIHKVGAAHT
                     NGDVVVLFPEQRVLAAGDIFANGPGTSAQLVDYRGGGSAKQWPKAVEQALTLPFDTVV
                     PGHGLVSTKADLTAYRDRATRFAETLEALVKQGKSRADIETVVRSQFDWEDFHVQAAL
                     DGLIAEFR"
BASE COUNT          335 a          668 c          672 g          288 t
ORIGIN      
        1 cgcgtggctg cagcagaccg tcgcgagccc gcccgccgag cgagccgcgc ggctgacgcg
       61 ctgggccgag gcgccagctg cgcgcgcggc tcacccgcgc gaggagcacc tgctgccgct
      121 gatggtcgcg gccggagccg cgctcgacga cgccggcgag tgcccgtatc gcgaagagaa
      181 cgtctacggc ggcatcacgg tctcgagctt ccgcttcggc gctgcgaaag caccggctcg
      241 agcgtgatat gcggcgctca gaagcccggc ttcaacgtgc ccctcgcgcg cgcgacctcg
      301 agcagatgcg ggtagaactg cacgaacgtg cgctcgacgg cggcgtgctc ggagtggcac
      361 tcgacgcacg gcgcggcctc ggcacccgcg agcggccgcg cggccttcgc gaggttgttg
      421 ccggggccga acgcgtagaa cgcccagccg tccggaaagc gtgagtcctt gacctcggct
      481 tcgagaaacg tcaactgcgt cgcgaagcgc ccggaacggt tgatcgagcc ctcgctctgc
      541 gacgcgcgaa actcgagcat gaacacggtg ccatcgggcc agctgcccgt gctcatgaag
      601 tgccgatagg cgctcggatt cacgaatgcg tgcgtgaagc gcgggttgtc cgggctcgcg
      661 gcctgcgtgc cgcgctcgcc gtcgtaggtc atgccgagcc ccgcgccgat gaacggccac
      721 gagcggtagt ccgccggcag cacgaggtcg gtcccgttct cgtactcggg gccgtcggca
      781 gcgggcggct gggccgacgc ggcgagcgcg agcgcgccga cgaccccgat cgcgatgact
      841 ttcgagcgcg acaatctgct cacggcgcac cctcctctcg gctccgaccg gcgatcatga
      901 ggcccgcgct cgatccctga caatagggcg cggcgcccgg ccgcagcgaa cgtcgggtgt
      961 tcgagtacac tgtgcgtccg ccggctcgcc gccggcaagc ggaagtcagg cacgccgtcg
     1021 gaggcataac gaatcatgaa cagtagggtc attgcgggtt tcttgggtgc ggcggtcata
     1081 gtgctggccc cgtgcgcaca ggcgcaattc ggcagcgagc cctcgaagct cgagatcatc
     1141 aaggtgcgcg acgacatcta cgtgatcagc aacgtcgcgg ttcccggcct cgtcaccgcg
     1201 ctcgtcacga acgaaggcgt ggtgctcgtc gacgacaagt tcgagatcga tcacgacaac
     1261 atcatggcga tgttgaagac ggtgacgaac caacccgtga agttcgtgat caacacgcac
     1321 tatcacggtg accacagcgg cggcaacgcg aagctccagg ccctcggcac gctcgcggtc
     1381 gcttcgacgg aagcccgcgc gagcatggtc gcggcgaatc aatcgggcca gccgaacatc
     1441 acggtcggcg atcacgcgga gatccacctc ggcggcaaga ccgtcgagat ccacaaggtc
     1501 ggcgccgcgc acacgaacgg cgacgtcgtc gtgctgttcc cggagcaacg cgtgctcgcc
     1561 gcaggcgaca tcttcgcgaa cggccccggt acgtcggcac agctcgtcga ctatcgcggc
     1621 ggcggcagcg ccaagcagtg gccgaaggcc gtcgagcaag cgctgacgtt gccattcgac
     1681 acggtggtcc cgggtcatgg cctggtctcg accaaggccg atctgaccgc gtatcgcgat
     1741 cgcgcgacgc gcttcgccga gacgctggaa gccctcgtga aacaaggtaa gtcgcgcgcg
     1801 gacatcgaga cggtcgtacg cagccagttc gactgggaag atttccacgt ccaggcggct
     1861 ctcgacggtc tgatcgccga gttccgctga cgcggctcgc gtcgccgccg cgagatgcgc
     1921 tcgtattggc tcgttcccgc aagcggtgcg atcgcgctcg agc
//
LOCUS       DATCUD010000542         1896 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55114, whole genome shotgun sequence.
ACCESSION   DATCUD010000542 DATCUD010000000
VERSION     DATCUD010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55114"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(41..>1896)
                     /locus_tag="VIQ99_07970"
     CDS             complement(41..>1896)
                     /locus_tag="VIQ99_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9183120.1"
                     /translation="TGLVVPVKAGNATVGVLDFYAPRVAAPDPRFLRMLRRLGSEIGH
                     FYQRSVAMEELRESEQRFSSTMELAAIGIAHVDSSGRFLYVNPQLCEMLGYTEQELLA
                     MTVKDVSHPGDIGATDDMAAKLHAGAVKSFKTEKRYLRKDGTPVWVGLTVAVKRDRSG
                     TPLYDVSVVEDISGRKRAEERIQYLATHDGLTGLPNRAMFAQLLTLAIETAKRYDRKL
                     AVLFIDLDRFKVINDTLGHEAGDVLLREMAARLRECLRASDVIARLGGDEFVVLLQEL
                     NEPTQAAAVARNILQVVMKPVVILGQECRVTASIGICMHPEEGQEDQSVMKNADMAMY
                     LAKEEGKNTYQFFSARMKPHSIERLALETNLRRALELDEFTLHYQAKLDFKSGAITGV
                     EALLRWHNPELGSVSPARFIPLAEETGLIVPIGKWVLRTACAQNVAWIAEGLPPLRMC
                     VNLSMRQMNDEGLVREIQSVLAETGMEPSLLELEVTESTIMHNAERAVSVLNAIKDLG
                     VRLAIDDFGTGYSSLAHLKRFPIDTLKVDRSFIREVPNDTEDKAIAEAIIAMGKTLSL
                     TVVAEGVETPEQQAFLSERMCDEMQGYYFSIPVAAQDFAELVRQYVPTPRR"
BASE COUNT          328 a          624 c          593 g          351 t
ORIGIN      
        1 gcgcgagatt caagccgcga caggggtgcg cgtgcgggtc tcagcgccgc ggagtcggca
       61 cgtactggcg cacgagctcg gcgaaatcct gcgcagccac cggaatgctg aagtagtagc
      121 cctgcatctc gtcgcacatg cgctcgctca ggaacgcctg ctgctccgga gtctcgacgc
      181 cctcggcgac gaccgtgagg ctaagcgttt ttcccatcgc aatgatcgct tcggcgatgg
      241 ccttgtcctc ggtgtcattc ggaacttcgc ggatgaacga gcgatcgacc ttcagcgtgt
      301 cgatcggaaa gcgcttcaag tgcgcgagcg aggaatagcc ggtgccgaag tcgtcgatcg
      361 cgagtcgcac gcccaaatcc ttgatcgcgt tcagcacact cacggcgcgc tcggcgttgt
      421 gcatgatcgt gctctcggtg acctcgagct cgagcagcga cggttccatg ccggtctcgg
      481 cgagaacgga ctgtatctcg cgcaccagcc cttcgtcgtt catctggcgc atcgacaggt
      541 tcacgcacat gcgtagcggc ggcaatcctt cggcgatcca cgcgacgttc tgcgcgcacg
      601 cggtgcggag cacccacttc ccgatcggca cgatcagccc ggtctcctcg gcgagcggaa
      661 tgaaccgcgc gggcgagacg gagccgagct cggggttgtg ccaacgcagc aacgcctcga
      721 ctccggtgat cgcgccgctc ttgaagtcga gcttggcctg gtagtgcaac gtgaactcgt
      781 cgagctccaa cgcgcggcgc aaattcgtct cgagagcgag acgctcgatc gaatgcggct
      841 tcatccgtgc gctgaagaac tggtacgtgt tcttaccctc ttccttcgcg agatacatcg
      901 ccatgtcggc gttcttcatg accgattggt cttcctggcc ttcctcggga tgcatgcaga
      961 tgccgatgct cgcggtcacg cggcactcct ggccgagaat gacgacgggc ttcatcacca
     1021 cctggaggat gttgcgcgcg acggcggcgg cctgcgtagg ctcgttgagc tcttgcagca
     1081 gcacgacgaa ctcgtcgccc ccgaggcgcg cgatcacgtc gctcgcgcgc aggcactcgc
     1141 gcaatcgcgc ggccatctcg cgcagcaaga cgtcgccggc ctcgtgcccg agcgtatcgt
     1201 tgatgacctt gaagcggtcc aagtcgatga acagcacggc gagcttgcgg tcgtagcgtt
     1261 tggccgtctc gatcgcgagc gtgagcagct gcgcgaacat cgcgcgattc ggcaggcccg
     1321 tgagaccgtc gtgggtcgcc agatattgga ttcgctcctc ggcgcgcttc cttccggaaa
     1381 tgtcctccac gacggacacg tcgtacaacg gagtaccgga acgatcgcgt ttcaccgcga
     1441 ccgtgagccc cacccacacg ggtgtgccat ctttgcgtag atagcgcttc tccgtcttga
     1501 acgacttgac tgcacccgcg tgcagcttcg cagccatatc gtcggtagcg ccgatgtcgc
     1561 cggggtgcga gacgtccttg accgtcatcg cgagcagctc ttgctccgtg taaccgagca
     1621 tctcgcagag ctgcgggttc acgtacagga atcggcccga cgagtcgacg tgcgcgatgc
     1681 cgatcgccgc gagctccatc gtcgacgaga aacgctgctc gctctcgcgc agctcctcca
     1741 tcgcaaccga gcgctgatag aaatgaccga tctcgctacc gagccggcgc aacatgcgca
     1801 ggaaccgcgg gtcgggagcg gcgacgcgcg gcgcgtagaa gtccagcacg ccgaccgtcg
     1861 cgttgcccgc cttgacgggt actaccaggc ccgtgc
//
LOCUS       DATCUD010000543         1528 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5631, whole genome shotgun sequence.
ACCESSION   DATCUD010000543 DATCUD010000000
VERSION     DATCUD010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5631"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VIQ99_07975"
     CDS             complement(<1..360)
                     /locus_tag="VIQ99_07975"
                     /inference="COORDINATES: protein motif:HMM:NF016873.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEY9183121.1"
                     /translation="MTGKRAARNVLVLTCEHGGNKIPRQYAHLFRGAGKVLATHRGWD
                     PGALTLARLLSRRLGRPLHAITWSRLFVEANRAPTNRRIWSRYTKDLPRPERDRILER
                     WWRPHRQDVEKAVAAELA"
     gene            complement(357..1085)
                     /locus_tag="VIQ99_07980"
     CDS             complement(357..1085)
                     /locus_tag="VIQ99_07980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183122.1"
                     /translation="MDVELPVLIERQPDYTTCGPTALHAVYQYYGDKITLDAVIKETP
                     KLPTGGTLAVHLAVHALSRGYEAATWVCNVRHMDPTWFQKPTDVLAKLKERGEAKGIT
                     KDPRYGPALEAVEKYVQLGGRFVWGDLTPELIAKTLGDGLPILTGTNGTYLYQCARET
                     DAGPDDVRGDAFGHFIVLCGYRDGDKTVAICDPLLDNPAHGTKYYRANVYRLLGAIFL
                     GVGTDDGNLLVLRPKGWKKPGSDR"
     gene            complement(1115..>1528)
                     /locus_tag="VIQ99_07985"
     CDS             complement(1115..>1528)
                     /locus_tag="VIQ99_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183123.1"
                     /translation="RYAFFEGNDPTTLANESFDGLLTGFSDWGAWWQGEIAGEYFVSN
                     SNLISHQLRVHVTPRDSISTGLILYDFLLDKTATPTGSDAVATELDWYMDWSVNDNFT
                     MSFVVAYADPGAAVQQSSGRTDEFLYGMIYGAYSF"
BASE COUNT          249 a          512 c          495 g          272 t
ORIGIN      
        1 cgcgagctcg gccgcgaccg ctttctcgac gtcctgacgg tgcggccgcc accagcgctc
       61 gaggatgcgg tcacgctcag gcctgggcag atccttcgtg taacgcgacc agatgcgccg
      121 gttcgtcggc gcgcgattcg cctcgacgaa caagcggctc cacgtgatcg cgtgcaatgg
      181 acggccgagc cggcgcgaca gcagacgcgc gagcgtcagc gcgccggggt cccaaccgcg
      241 gtgagtcgcg agcactttgc cggcgccgcg aaacagatgc gcatactgcc tcgggatctt
      301 gttgccgccg tgctcgcagg tcagcaccag cacattgcgc gccgcacgct tgcccgtcat
      361 cggtcgctgc ccggcttctt ccagcctttc gggcgcagca cgagcaggtt gccgtcgtcg
      421 gtgccgaccc ccaagaagat cgcgccgagc aggcggtaca cgttcgcacg gtagtacttc
      481 gtgccgtgcg cggggttgtc gagcagcgga tcgcagatcg cgacggtctt gtcgccgtcg
      541 cgatagccgc agagcacgat gaaatggccg aacgcgtcgc cgcgcacgtc atccggcccc
      601 gcatccgttt cacgcgcgca ctgatacaga tacgtgccgt tcgtgccggt caggatcggt
      661 aggccgtcgc cgagcgtctt ggcgatcagc tccggcgtca ggtcgcccca cacgaaccgg
      721 ccgccgagct gcacgtattt ctcgacggcc tcgagcgcgg gcccatagcg cggatccttc
      781 gtgatgccct tcgcttcacc gcgctccttc agcttcgcga gcacgtcggt cggcttctga
      841 aaccacgtgg ggtccatgtg gcgcacgttg cagacccacg tggccgcctc gtagccgcgt
      901 gacaacgcgt gcaccgcgag gtgcacggcc agcgttccgc cggtcggtaa tttcggcgtc
      961 tccttgatca cggcgtcgag cgtgatcttg tcgccgtagt actgatagac ggcgtgcaac
     1021 gcggtcgggc cgcacgtcgt gtagtcgggc tggcgctcga tcaggaccgg tagctcgaca
     1081 tccattcaac agtctccggc aagtcgttgt tttgtcagaa gctataagct ccgtagatca
     1141 tgccgtacag gaactcgtcg gtgcggcccg acgactgctg cacggcggcg ccgggatccg
     1201 cgtaagcgac cacgaagctc atcgtgaagt tgtcgttgac gctccaatcc atgtaccagt
     1261 cgagctcggt cgcgacagcg tcggaccccg tcggcgtcgc ggttttgtcg agcaggaagt
     1321 cgtacaggat caagccggtc gagatcgagt cccgcggcgt cacgtgcacg cgcaactggt
     1381 gcgagatcag gttcgagttc gagacgaagt actcgcccgc gatctcgccc tgccaccacg
     1441 cgccccagtc cgagaacccg gtcaggaggc cgtcgaagga ctcgttcgcg agcgtcgtcg
     1501 ggtcgttgcc ctcgaagaac gcgtaacg
//
LOCUS       DATCUD010000544         2450 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_47901, whole genome shotgun sequence.
ACCESSION   DATCUD010000544 DATCUD010000000
VERSION     DATCUD010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47901"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="VIQ99_07990"
     CDS             complement(<1..415)
                     /locus_tag="VIQ99_07990"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183124.1"
                     /translation="MRYAALLPLLVSSLVMAAPPATERRPFVYVEHGQRLEDPYRWLE
                     GSAAPELTQPDPDLDAQVSRWTDDQNAYSRAVLDALPGRAAVSAELERLLSLDAFGIP
                     REAGEWLFYSLRRGDEAQPVLYVQRGVDGEPRELIN"
     gene            complement(443..2170)
                     /locus_tag="VIQ99_07995"
     CDS             complement(443..2170)
                     /locus_tag="VIQ99_07995"
                     /inference="COORDINATES: protein motif:HMM:NF017183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative Ig domain-containing protein"
                     /protein_id="HEY9183125.1"
                     /translation="MALGAALGACGGDEETANGGSTNRAPTITGSPPTTANQGASYSF
                     TPTAADADGDALIFGVDAKPTWLAFDTATGRLSGTPGTANVGVHRGVVVWVSDGQAQT
                     LLPAFDLTVAASGPANRAPTIAGTPPTSVVVGSAYTFTPTASDADGNALTFAVANRPA
                     WAAFDARTGRLSGTPAATGTFANISISVSDGVATAALPAFTIAVTAPPGPGNRAPQIS
                     GTPPTAATQGMAYVFQPTATDADGNALTFTIVNRPTWATFNANTGALQGTPGATHVGA
                     YNNIAISVSDGQATAALPAFSITVGAANAPPTISGTPPTSATVGAQYTFTPAAADANG
                     NPLTFSIANRPSWATFSTSTGLLQGTPASANVGTFGNIMISVSDGQATAQLPAFSIAV
                     TQAPNRAPTISGTPSTAVVPGTQYTFTPTASDPDGDTLSFSIANGPAWAVFDAASGRL
                     QGTPGAGDVGTTTGIVITVSDGALTASLPAFTVTVQAVAVGSATLSWTPPTLNTDGSP
                     LTNLSGYKVYWGTALGTYPNSVTLNNPGLTSYVVDNLVPGTYYFVATALTSAGVESTF
                     SSAASKTIQ"
BASE COUNT          378 a          841 c          853 g          378 t
ORIGIN      
        1 cgttgatgag ctcgcgcggc tcgccgtcga cgccgcgctg cacgtaaagc acgggttgag
       61 cctcgtcgcc gcggcgcagc gagtaaaaca gccactcccc ggcctcgcgc ggaatgccga
      121 acgcatcgag cgacagcagc cgctcgagct cggcgctcac ggccgcgcgc ccgggcagcg
      181 cgtcgagcac ggcccgcgag tacgcgttct ggtcgtcggt ccaacggctg acttgcgcgt
      241 cgaggtcggg gtccggctgc gtgagctcgg gcgccgcgct accctcgagc cagcggtagg
      301 ggtcctcgag gcgttggccg tgctctacat agacgaacgg acgtcgttcc gttgccggag
      361 gcgcggccat cacgagcgag cttacgagga gtggcaacag ggctgcataa cgcacgcggc
      421 attatagccc gcagcacgaa gctcactgga tcgtcttgct tgccgccgag gagaacgtgc
      481 tctcgacacc ggcgctggtc aacgccgtcg ccacgaagta atacgtgccg ggcacgaggt
      541 tgtcgacgac gtagctcgtg agccccgggt tgttcaacgt gacggaattt ggatacgtgc
      601 cgagcgccgt gccccagtaa accttgtagc cggagaggtt cgtgagcggc gagccatcgg
      661 tattcaaggt cggcggcgtc cagctcagcg tcgcagagcc tacggccacg gcctgaacgg
      721 tcaccgtgaa cgcgggcagc gaagccgtga gcgcgccgtc gctgaccgtg atcacgatgc
      781 cggtcgtcgt gccgacgtcc ccggcgcccg gcgttccctg cagccggccc gaggccgcgt
      841 cgaatacggc ccaggcaggg ccgttcgcga tgctgaacga aagcgtgtcg ccgtcgggat
      901 cgctcgcggt cggcgtgaac gtgtactgcg tgcccggcac cacggccgtg ctcggcgtgc
      961 cgctgatcgt cggcgcgcga ttcggcgcct gagtcacggc gatcgagaac gcaggcagct
     1021 gcgccgtcgc ctgaccgtcg ctgacggaga tcatgatgtt gccgaaggtg ccgacgttcg
     1081 cgctcgcggg cgtcccctgt aggagccccg tactggtcga gaacgtcgcc cacgagggtc
     1141 tattcgcgat actgaacgtc agcgggttgc cgttcgcgtc cgcagccgcg ggtgtgaatg
     1201 tgtactgcgc gccgaccgtc gcgctcgtcg gcggcgtgcc ggaaatcgtc ggaggcgcgt
     1261 tggccgcccc gaccgtgatc gagaacgcag gcaacgccgc cgtcgcctgg ccgtcgctga
     1321 cgctgatcgc gatgttgttg taggccccga cgtgcgtcgc gccgggcgtc ccttgcagcg
     1381 cgcccgtgtt cgcgttgaac gtcgcccacg ttggccgatt cacgatcgtg aacgtcaacg
     1441 cgttgccgtc ggcgtcggtc gccgtgggct gaaacacgta ggccatgcct tgcgtcgccg
     1501 ccgtcggcgg cgtgcccgag atctgcggtg cgcgattgcc gggccccgga ggggccgtca
     1561 cggcgatcgt gaacgcaggc agcgccgcgg tcgcgacacc gtcgctgacg gagatcgaga
     1621 tgttcgcgaa cgtgcccgtc gcggccggcg tgcccgagag ccggccggtg cgcgcgtcga
     1681 acgcggccca cgcgggccga ttcgccacgg cgaacgtcag cgcgttgccg tccgcatcgc
     1741 tcgcggtcgg cgtgaacgtg tatgcgctgc ccaccacgac cgacgtcggc ggcgtgcccg
     1801 cgatcgtcgg cgcgcgattg gccgggcccg acgctgcgac ggtgaggtcg aacgcgggca
     1861 acagcgtttg cgcctggcca tccgacaccc aaacgacgac gccgcggtga acgccgacgt
     1921 tcgccgtccc gggcgtgccg gacagacggc cggtggccgt gtcgaacgcc aaccacgtcg
     1981 gcttcgcatc gaccccgaat atcagcgcgt cgccgtcggc gtccgcggcc gtcggcgtga
     2041 acgaatacga tgcgccttga ttcgcggtcg tcggcggcga acccgtgatc gtcggcgcac
     2101 gattggtgct cccgccgttc gccgtctctt cgtctccgcc gcacgcgccg agcgctgcac
     2161 cgagcgccac gatcgcgacc ccacgaacgc aacgagactt ccttgtcacc ctgaacccgc
     2221 cccactgaac gacgtgcgac gcacttcaag ttccgtgcca cggcgatcgg agcgagacgg
     2281 gccgcgggcc gcgccgtatt tgacgccaaa cggcgacgcc ccgaactgtc cctgttcacc
     2341 gacaaggccg cgaggcggcg atcgagatcc cacgaaacac tggggcgagc gcgtcggcga
     2401 agcgcgacaa gcgaatcgcg atcacggtgg ttatctaata caaggatgtc
//
LOCUS       DATCUD010000545         2372 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90661, whole genome shotgun sequence.
ACCESSION   DATCUD010000545 DATCUD010000000
VERSION     DATCUD010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90661"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1168)
                     /locus_tag="VIQ99_08000"
     CDS             complement(<1..1168)
                     /locus_tag="VIQ99_08000"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9183126.1"
                     /translation="MRTIIRRIALTRALTLCAGIVVAAANQAGAQQNGAERPYTTWRS
                     YGGGPHSSQYSALDQINESNVSKLEVVWEFPVGERSFVFNPIVVDDTMYVLARDNEIV
                     ALDAATGAEKWAHPHEGGVNGRGINYWQSRDGSDRRLVYLNAGFVTALNARTGETITS
                     FGDNGRVDLRTALAASGWDITNVRPLGNSNPGRIYDNLMIVTLPAQGAGYSSTPGNVQ
                     AYDVVTGKHVWTFHAIPHPGELGYDSWPKDAYKTAGGVHNWSEFTVDEANGIAFIPFG
                     TARYDFYGGNRAGDNLYANSLVALDARTGKRLWHQQLVHHDLWDYDLPQAPKLLTIRD
                     GQRQRQVVAQATKHGFLFVFDRKTGEAVWPIEERRVPQSDVPGEHTSPTQPFPTK"
     gene            1319..2071
                     /locus_tag="VIQ99_08005"
     CDS             1319..2071
                     /locus_tag="VIQ99_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006219220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HEY9183127.1"
                     /translation="MAFGKVPLQRGDKGAAVVELQLRLAGFRGTLWDGKFGPGTELQV
                     VCFQRDYMRLPNPTGRVDRPTLDALLRFEAEFPIAADKLRCPCGSCAGFGRKRFKGEY
                     MTGDETEKNYRYEYPGMHKAILHSFRAAAFYLQRAGFPAPLISSGYRCWTNNEQKGRT
                     STNHMGKAIDLDFPLVAGEDKRDDALRCERGRGVLVELANFQIGWTASNRKALEPKDI
                     APTWIHMDVRNYDRRYLAERFFVKPRAGAGSL"
     gene            2088..>2372
                     /locus_tag="VIQ99_08010"
     CDS             2088..>2372
                     /locus_tag="VIQ99_08010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183128.1"
                     /translation="MSGKTLRTLADQLWKNHGVSLIPTFDSSIAPGSVLLRTDWNRIG
                     HIGNISSIIDTAKLPPIVGPAPCMLADFKRSHELNIDAAIELLGAPASVGG"
BASE COUNT          403 a          764 c          772 g          433 t
ORIGIN      
        1 gcttcgtcgg gaacggctgc gtcggcgagg tgtgctcgcc cggcacgtcg gactgcggca
       61 cgcgccgttc ctcgatcggc cagacggctt cgccggtctt ccgatcgaac acgaacagga
      121 agccgtgctt cgtcgcctgc gccacgactt ggcgctgtcg ttgaccgtcg cgaatcgtca
      181 gcagcttcgg cgcttgcggc aggtcgtagt cccagagatc gtggtgcacg agctgctgat
      241 gccagagccg cttgccggtt cgcgcatcga gcgcgacgag cgagttcgca tagagattgt
      301 cgccggcgcg attgccgccg tagaagtcgt accgggcggt gccgaacggg atgaacgcga
      361 tgccattcgc ctcgtcgacc gtgaattcgc tccagttgtg cacgccgccg gcggtcttgt
      421 acgcgtcttt gggccagctg tcgtagccga gctcgccggg gtgcggaatc gcgtggaacg
      481 tccacacgtg tttgcccgtg acgacgtcgt aggcttgcac gttacccggc gtcgacgagt
      541 aacccgcgcc ctgcgccggc agcgtcacga tcatgaggtt gtcgtagatg cggcccgggt
      601 tactgttgcc gagcggccgc acgttcgtga tgtcccaacc gctcgcggcc agcgccgtgc
      661 gcaggtccac gcggccgttg tcgccgaagc tcgtgatcgt ttcgcccgtg cgcgcattca
      721 gggccgtcac gaacccggcg ttcaggtaca cgagccggcg atcgctgccg tcgcggctct
      781 gccagtagtt gatgccgcgc ccattcacgc cgccctcgtg cgggtgcgcc catttctccg
      841 cgcccgtcgc tgcgtcgagc gccacgatct cgttgtcgcg cgcgagcacg tacatcgtgt
      901 cgtcgaccac gatcgggttg aacacgaagc tgcgctcgcc gaccgggaac tcccacacga
      961 cctcgagctt cgagacattc gactcgttga tctgatcaag ggccgagtac tgcgacgagt
     1021 gcggtccgcc tccgtagctg cgccaggtcg tgtacgggcg ctcggctccg ttttgctgcg
     1081 cgccggcttg gttcgcggct gcgaccacga tcccggcaca gagcgtgagc gctcgcgtga
     1141 gcgcgattct tcgaatgatc gttcgcatac gccccccaac ggcgatccgc gacagtctac
     1201 gcgcaagtgt ccggtagttg acagattcgc cgtccgggct ctgttaggtt ggtcaacgaa
     1261 caggcgccgg actcaaagac aatgacgaac ccggcggccg atcggatcgg aggtgcccgt
     1321 ggctttcggc aaggttcctc tgcaacgtgg agacaaaggc gcggcggtcg tcgagctgca
     1381 gctgcggttg gccgggtttc gcggcacgct atgggacggc aagttcggtc ccggcaccga
     1441 gctacaagtc gtgtgctttc aacgcgacta catgcgattg ccgaacccta cgggccgggt
     1501 cgatcgaccg acgctcgacg cgctcctgcg gttcgaagcc gagtttccga tcgcggccga
     1561 caaattgcgt tgcccctgcg gcagctgcgc gggattcggt cgcaagcgtt tcaagggcga
     1621 gtacatgacc ggcgacgaga ccgagaagaa ctaccggtac gaataccccg gcatgcacaa
     1681 agcgatcctg cacagctttc gagcggcggc attttaccta cagcgcgccg ggtttccggc
     1741 gccgctgatt tcgagcggtt accgctgctg gaccaacaac gagcagaagg gtcgcacgtc
     1801 gacgaaccac atgggcaagg ccatcgacct cgattttccg ctggtggccg gtgaggataa
     1861 gcgcgacgat gcgcttcgtt gcgagagggg acgcggcgtg ctcgtcgagc tcgcgaactt
     1921 ccagatcggc tggaccgcga gcaaccgcaa ggcgctcgag cccaaggaca tcgcgccgac
     1981 ttggatccac atggacgtgc gcaactacga tcgccggtat ctcgcggaac gtttcttcgt
     2041 gaaaccgcgt gccggtgcgg gcagtctgtg acacgaggtg aatcgagatg tccggcaaga
     2101 ctctgagaac attggccgac cagctctgga agaaccacgg cgtgagcctg attcccacgt
     2161 tcgactccag cattgcgccc ggcagcgtgc tgctgcgcac cgactggaac agaatcggtc
     2221 acatcggcaa catcagctcg atcatcgata cggcgaaatt gccgccgatc gtcggccccg
     2281 cgccctgcat gctcgcggat ttcaagcgta gccacgagct caacatcgat gcggccatcg
     2341 agctgctcgg cgcacccgcg agcgtgggcg gg
//
LOCUS       DATCUD010000546         1999 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33793, whole genome shotgun sequence.
ACCESSION   DATCUD010000546 DATCUD010000000
VERSION     DATCUD010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33793"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(160..750)
                     /locus_tag="VIQ99_08015"
     CDS             complement(160..750)
                     /locus_tag="VIQ99_08015"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9183129.1"
                     /translation="MNSAKTFLGVAALAAVSWFAMNGVGRVEAQNGAKPLTAQDLLDI
                     RALIDGYSHLLDTCRNNGNDYADQFTPDATFGVSSEWGKAKIWFRGREQLRRAGGGGE
                     TECRPRSIDGYAFHLTINPVITATPTGAHAISTLLTITNDTDARGDVVHWEGGYEDTF
                     EKTANGWRFKSRVHVWPEVQWTDRVEDMPPRRLEDE"
     gene            complement(747..1208)
                     /locus_tag="VIQ99_08020"
     CDS             complement(747..1208)
                     /locus_tag="VIQ99_08020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183130.1"
                     /translation="MSGKPTRRSFFGHAGAALATPFAATVALAGERDGAGYVAGRLAA
                     LEDANAIRALLQDYAQRVSTGLQAAPAANVRDLRLDANAAVDVAANGTATVCVPCTVE
                     TATPIDGHETVVEMARLQGDGVVRRSERRLLAGTLVKRDGTWMLEQTELTA"
     gene            complement(1218..>1999)
                     /locus_tag="VIQ99_08025"
     CDS             complement(1218..>1999)
                     /locus_tag="VIQ99_08025"
                     /inference="COORDINATES: protein motif:HMM:NF022164.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MoaF N-terminal domain-containing protein"
                     /protein_id="HEY9183131.1"
                     /translation="TEKNVFGPPSAMAGNRSPISDFLVGKELTIRFDNGVAVEYRFDE
                     IQALRWRHAGETEWHSERYESWESAPGVIMFGHLVTGAENKDCYKLVADFDHGLVTCI
                     HGTIGSQYIANEAQAETWFGVIEMEGLTPPKYKRHHFTDELVGRAVTWNYSPGLTSMH
                     LYTTPHSLSWIIFGESGAGGMEWSGPASYVKIRDELYLAYWLEEACNGTLGTILVNLR
                     TMHDCGIGYHCGRDGLRLSSMGAHARHAGRLDLAKYYRLKA"
BASE COUNT          294 a          673 c          671 g          361 t
ORIGIN      
        1 gtctggtcgc ggttcccggc gatcgacgtc gagcaggggc ccggtggcac gacactcgtg
       61 cggtttacgg acgttcgcta tcgcgccgat gaccggatcc cgggaccgac cgtgcgcctc
      121 gatgcgagcg cggtcggcgg cgactgacga atcgcgggct tactcgtctt ccaatctgcg
      181 cggcggcatg tcctcgacgc ggtcggtcca ctgcacctcg ggccacacat gcacgcgcga
      241 cttgaaccgc cagccgttcg cggtcttctc gaacgtgtcc tcgtagccgc cttcccagtg
      301 cacgacgtcg ccgcgagcgt ccgtgtcgtt cgtgatcgtc aacaaagtcg agatcgcgtg
      361 tgcaccggtc ggtgtcgcgg tgatcacggg gttgatcgtc aggtggaacg cgtagccgtc
      421 gatcgagcgc ggccggcact cggtctcgcc gccgccgccg gcacgccgca gttgctcgcg
      481 gccgcggaac cagatcttgg ctttgcccca ttcggacgat acgccgaacg tggcgtcggg
      541 cgtgaactgg tcggcgtagt cgttgccgtt gttgcggcac gtgtcgagca gatgcgaata
      601 accgtcgatc agagcgcgga tgtcgagcag gtcctgcgcc gtgagtggct tagcaccgtt
      661 ctgggcctcg actctcccga cgccgttcat ggcgaaccat gacaccgccg cgagcgcggc
      721 caccccgaga aacgtttttg cactgttcat gcggtgagct ccgtctgctc gagcatccaa
      781 gtcccgtcgc gcttgacgag cgtgccggcg agcaggcgcc gctcgctgcg cctgacgacg
      841 ccgtcgcctt gcaggcgcgc catctcgacg acggtctcat ggccgtcgat cggcgtggcc
      901 gtctcgacgg tgcagggcac gcacacggtt gccgtgccgt tcgcggcgac gtccaccgcg
      961 gcgttcgcat cgagacgcaa gtcgcgaacg ttggccgcgg gcgcagcctg cagacccgtg
     1021 ctgacgcgct gtgcgtagtc ttgcagcagc gcgcggatcg cattcgcgtc ctcgagcgcg
     1081 gcgagtcgtc ccgcgacgta accggcgccg tcgcgttcgc cggccaaggc cacggtcgcc
     1141 gcgaacggtg tcgccaaggc cgcgccggcg tggccgaaga acgatcgtct cgtgggcttg
     1201 ccgctcatga cgctacctca cgccttcaat cggtagtact tcgcgaggtc caagcggccc
     1261 gcgtggcgcg cgtgcgcgcc catcgacgag agccggaggc cgtcgcgccc gcagtgataa
     1321 ccgatgccgc agtcgtgcat cgtgcgcaaa ttcacgagga tcgtgccgag cgtgccgttg
     1381 caggcttcct cgagccagta ggcgagatac agctcgtcgc ggatcttcac gtacgacgcg
     1441 gggccgctcc attccatgcc gccggcgccg ctctcgccga agatgatcca cgacagcgaa
     1501 tgcggcgtcg tgtacaggtg catcgacgtg agccccggcg agtaattcca cgtgacggcg
     1561 cggcccacga gctcgtcggt gaagtgatgg cgcttgtact tcggcggcgt caggccttcc
     1621 atctcgatca cgccgaacca cgtctcggct tgggcctcgt tcgcgatgta ctggctgccg
     1681 atcgtgccgt gaatgcacgt gacgagcccg tgatcgaaat cggcaacgag cttgtagcag
     1741 tccttgttct cggcgccggt gacgaggtgg ccgaacatga tcacgccggg cgcgctctcc
     1801 cacgactcgt agcgctccga gtgccactcg gtttcgccgg cgtggcgcca gcgcagcgcc
     1861 tggatctcgt cgaaccggta ctcgacggcg acgccgttgt cgaagcggat cgtgagctcc
     1921 ttgccgacga ggaagtcgct gatggggctc cggttgccgg ccatcgcgct cggcgggccg
     1981 aacacgtttt tctcggtca
//
LOCUS       DATCUD010000547         1542 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19620, whole genome shotgun sequence.
ACCESSION   DATCUD010000547 DATCUD010000000
VERSION     DATCUD010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19620"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="VIQ99_08030"
     CDS             <1..517
                     /locus_tag="VIQ99_08030"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY9183132.1"
                     /translation="DATFGGLDALVTAAGIINTTPFFETTVAEFRKLFDINVIGSFLT
                     VREGSKYMKKGARICMVASISSYTGGGYVARGAYATSKGAVLTMMKSCARELGPRGIA
                     VNAVAPGFIDTPFVASAMSDPVRRKEVEAAVGKVGSAEQVAECCAWLISPAASFVHGE
                     TLIADGGILMR"
     gene            617..1369
                     /locus_tag="VIQ99_08035"
     CDS             617..1369
                     /locus_tag="VIQ99_08035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183133.1"
                     /translation="MAVELALQNPARDESVADRWVYVLTAALFAAVAIVGFAPRSMAI
                     LAGELRFPPLIVHVHAALMVAWLGLLLAQTLLVAKDRTALHMKLGLASLVVAPCLWAT
                     MIAITIWRYDERAELGQIVQGSNILLTQARSIIYFALFFTWAFLVRKTDRETHKRMML
                     LATVGLMGAAITRMTWLPTTFPEGYGAVHAYMLLLLAPSLTYDIVRLGRPHRAYVIGL
                     ALFLPWLLLTQLLWGSPWWVETASKLMGVDAG"
BASE COUNT          246 a          505 c          506 g          285 t
ORIGIN      
        1 cgacgcaacg ttcggcggcc tcgacgcgct cgtcacggcc gcgggcatca tcaacacgac
       61 gccgttcttc gagacgacgg tcgccgagtt tcgcaagctg ttcgacatca acgtcatcgg
      121 ctctttcttg acggtgcgcg aaggctccaa gtacatgaag aaaggcgcgc gcatctgcat
      181 ggtcgcgagc atctcgagct acacgggcgg cggctacgtc gcgcgcggcg cgtacgcgac
      241 gagcaagggc gccgtgctga cgatgatgaa gagctgcgcg cgcgagctcg ggccgcgcgg
      301 catcgccgtg aacgcagtcg caccgggctt catcgacacg ccgttcgtgg catccgcgat
      361 gagcgacccg gttcggcgca aagaggtcga ggcggccgtc ggcaaggtcg gctcggccga
      421 gcaggtcgcc gagtgctgcg cgtggctgat ctcgccggcc gcgagcttcg tgcacggcga
      481 aacgctgatc gccgacggcg ggatcttgat gcgctagacg attgggccgt cgccgaacgc
      541 gacacggcag tacgcaggaa acggggacgt gttcgcagta gactccctgc acggtcatag
      601 caccaccggg ggtcccatgg ctgtagagct agcgctccag aatccggccc gcgacgaatc
      661 cgtcgcagac cgatgggtct atgtgctcac ggctgctctg ttcgcggcgg tcgcgatcgt
      721 cggcttcgcg ccgcggtcca tggcgatcct ggcaggcgag ctacgcttcc ctccgctgat
      781 cgtgcatgtt cacgccgctc tgatggtcgc gtggctcggc ctgttgctgg cgcagacgct
      841 gctcgtcgcg aaggaccgaa ctgcgcttca catgaagctg ggtctcgcgt cgctcgtggt
      901 cgcaccgtgc ctgtgggcga ccatgatcgc gatcacgatc tggcgctacg acgaacgcgc
      961 ggagctcggc cagatcgtac agggctcgaa catcttgctg acccaggcgc gctcgatcat
     1021 ctacttcgcg ttgttcttca cgtgggcgtt cctcgttcgc aaaacggatc gtgaaaccca
     1081 caaacgcatg atgctgctcg cgacggtcgg cctgatggga gccgcgatca cacgcatgac
     1141 gtggctgccg acgacttttc cggaaggcta tggcgccgtg cacgcgtaca tgttgttgtt
     1201 gctcgcgcct tcgctgacct acgacatcgt ccgtctcggg cgcccacatc gcgcctatgt
     1261 aatcggcctt gcgctcttct tgccttggct cctcctaacg caattgctgt ggggctcgcc
     1321 gtggtgggta gagaccgcga gcaagctcat gggagtcgac gccggctgac gcggcgacgg
     1381 cgctgcgcct caagcgcggg agcgccaagg tactatccga agtcacatcc ggcgtttccg
     1441 agcgccccta cctgcctgtg atcagcccgc ccgagatcac gatctccacg cggcgattgc
     1501 gcgcccggcc gtctgccgtg gcgttgtcgc caaccggtcg tg
//
LOCUS       DATCUD010000548         2315 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90672, whole genome shotgun sequence.
ACCESSION   DATCUD010000548 DATCUD010000000
VERSION     DATCUD010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2315
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90672"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            99..1412
                     /locus_tag="VIQ99_08040"
     CDS             99..1412
                     /locus_tag="VIQ99_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9183134.1"
                     /translation="MTKARVLFASLIGTTIEFFDFYIYGTAAVLVFPQLFFPASEPST
                     ATLQSLATFALAFFARPVGSALFGHFGDRVGRKATLVAALLTMGLSTVAIGLLPTYAT
                     IGIAAPALLALCRFGQGLGLGGEWGGAVLLATENAPRGRESWYGMFPQLGAPLGFICS
                     TGIFIVLTAIMTDAEFLAWGWRVPFLASAVLVLVGLWVRLRLTETPAFERAIAQNERV
                     RVPILVVCREHTRTLALATLAAITTFVVFYLMTVFTLAWGTAQLGFARQDFLLLQMIG
                     VLFFLVAIPLSAVVADRVGRRAILITSSIAAIVFGLSFAPLFGTADPVTVTVFLAIGL
                     GVMGWTYGTLGAALAELFPTAVRYTGASLTFNLAGIFGGSLAPYIATALGSSYGIASV
                     GYYLCAAAVLTLIAQLLLGPALGTRRTAHGPSPAGVSAASSSAIR"
     gene            complement(1358..1618)
                     /locus_tag="VIQ99_08045"
     CDS             complement(1358..1618)
                     /locus_tag="VIQ99_08045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183135.1"
                     /translation="MRAGWLILLVALAGCATVPPMNGGIGSEARATWQGPSQSSGGGR
                     TTKVGLPLTRAQKIGLWTGVAVLLAYLIADDDAAETPAGDGP"
     gene            complement(1622..>2315)
                     /locus_tag="VIQ99_08050"
     CDS             complement(1622..>2315)
                     /locus_tag="VIQ99_08050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007832581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9183136.1"
                     /translation="DPTAEHKERYYEIVRWAAERGMSITMHWGPDATVDHLLGIFERV
                     NREVPIAPLRWSIAHLNDASEATLRRMAALGVGWTVQDAMYFGGEDLIRRGGPDAGRR
                     IPPVVTGKRVGVAIGAGTDAHRVASYNPFTALQWLLDGKTVAGTPIRGPEETPDRMTA
                     LELYTLGSAWFSFDDDVRGSLEVGKLADLAVLSGDYLTVPVEEVGNLESVLTLLGGEV
                     VYASGELAVAER"
BASE COUNT          307 a          814 c          776 g          418 t
ORIGIN      
        1 cggaggcgga agcacggacc ccgtcttact gttgctcgcg acgctggcgt tgctcgcgca
       61 acgtcgacga cggccacgac acgaatagcc atttcagaat gaccaaagcc cgcgtgctgt
      121 tcgcgagctt gatcggcacg acgatcgagt tcttcgattt ctacatctac ggcacggccg
      181 ccgtgctcgt gttcccgcag ctgttcttcc cggccagcga gccgtcgacg gcgacgctgc
      241 aatcgctcgc gacgttcgcg ctcgcgttct tcgcgcggcc ggtcggctcg gcgctgttcg
      301 gccacttcgg cgaccgcgtc ggccgcaagg ccacgctcgt cgcggcgttg ctgacgatgg
      361 ggctctcgac cgtcgcgatc ggcttgctgc cgacgtacgc gacgatcggg atcgcggcgc
      421 cggcgttgct cgcactgtgt cgattcggcc aaggcttggg gctcggcggc gaatggggcg
      481 gtgccgtgtt gctcgcgacc gagaacgcgc cgcgcggccg cgagagctgg tacggcatgt
      541 tcccgcagct cggcgcaccg cttgggttca tctgctcgac gggcatcttc atcgtgctga
      601 cggcgatcat gaccgacgcc gagttcctcg cgtggggctg gcgcgtgccg ttcctcgcga
      661 gcgcggtgct cgtgctcgtg gggctgtggg tgcgattgcg gctgaccgag acaccggcgt
      721 tcgagcgcgc gatcgcgcag aacgaacgcg tgcgcgtgcc gatcctcgtc gtgtgccgcg
      781 agcacactcg tacgctggcg ctcgcgacgc tcgcggcgat cacgacgttc gtcgtgttct
      841 atctgatgac ggtgttcacg ctcgcgtggg gcaccgcgca gctcggcttc gcgcgtcagg
      901 atttcttgct gctgcagatg atcggcgtgc tgttcttcct ggttgcgatc ccgctgtcgg
      961 ccgtcgtggc cgatcgcgtc ggacgccgcg cgatcctgat cacgtcgagc atcgcggcga
     1021 tcgtgttcgg gctctcgttc gcgccgctgt tcggcacggc cgatccggtc accgttacgg
     1081 tgttcctcgc gatcgggctc ggcgtgatgg gctggaccta cggcacgctc ggcgccgcgc
     1141 tcgcggagct gtttccgacc gccgtcagat acacgggcgc atcgctgacg ttcaacctcg
     1201 ccggcatctt cggcgggtcg ctcgcaccgt acatcgcgac ggctctcggg tcgtcgtatg
     1261 gcatcgcctc ggtcggctac tacctatgcg ccgcagcggt gctgacgctg atcgcgcaac
     1321 tcctgctcgg gccggcgctc gggacgcgcc ggacggctca tggaccgtcg ccggcggggg
     1381 tttcggcggc atcgtcgtcg gcgatcagat aggcgagcaa aaccgcgacg ccggtccaca
     1441 gcccgatctt ttgcgcgcgt gtcagcggca acccaacctt cgtggtccgg ccgccgccgc
     1501 tgctctgcga cggtccctgc caggtcgctc gggcttcgct accgatcccg ccgttcattg
     1561 gcggcaccgt ggcgcagccc gcgagcgcaa cgagcaggat cagccatccg gctctcacgt
     1621 cctagcgttc cgccaccgcg agctcgccgc tcgcgtacac gacttcgccg ccgagcagtg
     1681 tcagcaccga ctcgaggtta ccgacctctt cgacgggcac cgtgagatag tcgcccgaca
     1741 gcaccgcgag atcggcgagc ttgccgacct cgagcgagcc gcgcacgtcg tcgtcgaacg
     1801 agaaccacgc gctccccaac gtgtagagct cgagcgcggt catgcggtcc ggcgtctctt
     1861 ccggtccgcg gatcggcgtg ccggccacgg tcttgccgtc gagcagccat tgcagcgccg
     1921 tgaacgggtt gtacgacgcg acgcgatgcg catccgtgcc tgcgccgatc gcgacgccga
     1981 cgcgtttgcc cgtcacgacc ggcgggatac ggcgccccgc gtcgggcccg ccgcggcgaa
     2041 tcaggtcctc gccgccgaag tacatcgcgt cctggaccgt ccagccgacc ccgagcgctg
     2101 ccatgcggcg cagcgtcgcc tccgacgcat cgttcagatg cgcgatcgac caacgcaacg
     2161 gcgcgatcgg cacctcgcga ttcacgcgct cgaagatgcc gagcaggtga tcgacggtgg
     2221 cgtcgggacc ccaatgcatc gtgatcgaca tgccgcgctc ggcggcccag cggacgatct
     2281 cgtagtagcg ctccttgtgc tcggccgtcg gatcc
//
LOCUS       DATCUD010000549         2072 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76564, whole genome shotgun sequence.
ACCESSION   DATCUD010000549 DATCUD010000000
VERSION     DATCUD010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76564"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1031
                     /locus_tag="VIQ99_08055"
     CDS             <1..1031
                     /locus_tag="VIQ99_08055"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HEY9183137.1"
                     /translation="LNTGSSTREWVAVHRRHHAHCEKEGDPHSPRLFGLKKVLLEGAE
                     LYRVAARDRATLEKYAKGTPNDWLENNLYHHPVRSYYGITLLVVTDLVLFGVPGIIMI
                     ALQLANMPFLAAGVINGLAHAKGYRNFETDDSSTNLWPLAIFVAGEELHNNHHAFPTS
                     ARFSMRRHEIDLGWLHLKLLVALGLAKIRRVADAPQLETTSRDTTELDELRAIIVHRM
                     HVLRHYTYNVTLPVLRRELESLGENANSLLRATRRHLAWQPEMLDESSRARLAELARR
                     HPRFKTVLEFRNELKQLWEGAHTSNERLLAEFREWCARAEQSGIQGLQEFVAYLKSFR
                     AMREPSPV"
     gene            complement(1104..1259)
                     /gene="rpmG"
                     /locus_tag="VIQ99_08060"
     CDS             complement(1104..1259)
                     /gene="rpmG"
                     /locus_tag="VIQ99_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012489089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEY9183138.1"
                     /translation="MREKIRLMSSAGTGHYYTTTKNRRLHPEKMEVMKYDPVVRKHVT
                     YKETKIK"
     gene            complement(1274..1510)
                     /gene="rpmB"
                     /locus_tag="VIQ99_08065"
     CDS             complement(1274..1510)
                     /gene="rpmB"
                     /locus_tag="VIQ99_08065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEY9183139.1"
                     /translation="MSRVCQVTGKGPMVGNKVSHANNKTKRRFLPNLHTQRFWLENEK
                     RFVRLRVSRQGLRIIDKLGIEQVVADLRAKGEHI"
     gene            complement(1589..>2072)
                     /gene="radC"
                     /locus_tag="VIQ99_08070"
     CDS             complement(1589..>2072)
                     /gene="radC"
                     /locus_tag="VIQ99_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013533846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEY9183140.1"
                     /translation="PAELSRAHGLGPARVARLAAALELGRRYLEAPLEPRSALAAPAD
                     AARFFKARLLDLPHEVFCCLFLDARHRLIRYEELFRGTIDGATVYPREVVKRALQHNA
                     SAVILGHNHPSGVSEPSEADRSITLKLAKALALVEVRLLDHVVVSRGGHVSLAERGLV
                     "
BASE COUNT          369 a          658 c          669 g          376 t
ORIGIN      
        1 ggttgaacac cggctcgtcg acgcgggagt gggtggccgt gcatcggcgg catcacgcgc
       61 attgcgagaa ggaaggcgat ccgcacagcc cccggctctt cggactgaag aaggtgttgc
      121 tggaaggcgc cgagctctac cgcgtggccg cgcgcgatcg cgcgacgctc gagaaatacg
      181 cgaaaggaac gccgaacgac tggctcgaga acaatctata tcaccatccc gtgcgcagct
      241 attacgggat tacgctgctc gtcgtcaccg atctcgtgtt gttcggtgtc cccggcatca
      301 tcatgatcgc tctccagctc gcgaacatgc cgttccttgc cgcgggcgtc atcaacggcc
      361 tcgctcacgc gaagggttat cggaacttcg agaccgacga ctcctcgacg aacctttggc
      421 cgctcgcgat cttcgtggcc ggcgaagagc tgcacaacaa ccaccatgcg ttcccgacgt
      481 cggcgcgctt ctcgatgcgc cggcacgaga tcgatttagg ctggttgcac ttgaagctgc
      541 tcgtcgcgct cgggctcgcg aagattcgcc gagtcgccga cgcgccgcag ctcgagacca
      601 cctcgcgcga cacgaccgag ctcgacgagc tgcgggcgat catcgtgcat cgcatgcacg
      661 tgctcaggca ctacacctac aacgttacgc tgccggtgct ccggcgcgag ctcgaaagct
      721 tgggtgagaa cgcgaactcg ctgctgcgcg cgacgcggcg ccatttggcc tggcagccgg
      781 agatgctcga cgaatcgtcg cgagcgcggt tggcggagct cgcgcggcgg catccgcgct
      841 tcaagacggt cctcgagttc cgcaacgagc tcaagcagct ttgggagggc gcccacacga
      901 gcaatgagcg attgctcgcg gagtttcgcg agtggtgcgc gcgcgccgag cagagcggta
      961 tccaaggcct gcaggagttc gtggcctacc tgaagtcgtt ccgtgcgatg cgggagccat
     1021 cgccggtctg actgcgaggc tcgccgtaaa caaaaaaccc gccgggaggc gggttttttt
     1081 tcgcaccgta ggcagggcgc gagctatttg atcttcgttt ccttgtacgt gacgtgcttg
     1141 cgcacgacgg ggtcgtattt catgacctcc atcttctccg ggtggagacg gcgattcttg
     1201 gtcgtcgtgt agtagtggcc ggtgccggcc gaagacatca agcgaatttt ttcgcgcatc
     1261 gtctatctcg cagctaaatg tgttcgccct tcgcgcgcag atccgcgacg acctgctcga
     1321 taccgagctt gtcgatgatc ctcaagcctt ggcgcgatac gcggagcctc acgaagcgct
     1381 tctcgttctc gagccagaaa cgctgcgtgt gcagattcgg caggaaacga cgcttcgtct
     1441 tgttgttcgc gtgcgaaacc ttgttgccga ccatcggccc tttgccggtg acttggcaca
     1501 ccctggacat ggcgtaaatc ctaagtaagc ccttcgaagg ggcggggact atacccgttg
     1561 acccttaggg tcggcaaggc gcggcggctc agaccaggcc gcgctcggcc agggaaacgt
     1621 ggccgccgcg gctcacgacc acgtggtcga ggagcctgac ctccacgagg gccaaggcct
     1681 tcgcgagctt cagcgtgatg ctgcggtccg cctcgctcgg ctcggagacc ccggacggat
     1741 ggttatgccc gaggatcacc gcggacgcat tgtgctgcag ggcgcgtttc acgacctccc
     1801 gcgggtacac cgtggcgccg tcgatcgtgc ctcgaaacag ctcttcgtaa cggatcaggc
     1861 gatgccgggc atcgagaaac aggcaacaaa acacctcgtg cggcaagtcc aagagccgcg
     1921 ccttgaagaa gcgtgccgca tctgcgggcg ccgcgagcgc ggaacgcggc tcgagcggtg
     1981 cctcgagata acggcgaccg agctcgagag ccgctgcgag ccgcgccacg cgcgcgggcc
     2041 ccagcccgtg ggctcgtgag agctcggccg gc
//
LOCUS       DATCUD010000550         1984 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_5714, whole genome shotgun sequence.
ACCESSION   DATCUD010000550 DATCUD010000000
VERSION     DATCUD010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_5714"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="VIQ99_08075"
     CDS             <1..1355
                     /locus_tag="VIQ99_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183141.1"
                     /translation="RTGIAESTFGRQAVNDGKLCVRLRNGKDVTLETAAKIRGFIGAA
                     KAPEPTSSNNKGTTMSGSTKRKATKVSATADGKSDRPFRFYDNRQKYLAFVNTTNEKW
                     KVAERASRELTLLKPNPPALRLFDAGMGDATVLSHIMRAMHRRFPIMPFFIVGKEISL
                     EDVRLSLEKLPDRFIEHPASVIVITNLYYAEAPWLRPRDVQMAAALNWREVALEGSSS
                     YEYGEQLRSLDPFLVDGWQVKASEKTGNPMYVRPSVLVIYRKDHSFLLDDVIPKPGQV
                     AGNYDLVIASQPWRARMSAEFKVKKVLAPLIRSLGPAGRLLAVQSCGNDPALEMVHEI
                     WPDEEPFKVNRHELIKVLRDELGREARDFNFVSGSDAKSIFRYEMHTLPSEVSQSIGT
                     STLFAAWNAASYVAQIEDERIENAMREGDQYLQGTAKILKKHKGLWFNDESFVVSRKQ
                     "
     gene            1375..>1984
                     /locus_tag="VIQ99_08080"
     CDS             1375..>1984
                     /locus_tag="VIQ99_08080"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEY9183142.1"
                     /translation="MTNDELKKHIVAFVRDYSIEITPHDAGKLDAIRAELAEGTCVYV
                     AHPPGVPIDDIVTLAGQVQKLGLTATPHVIARKLESRDQLERALSKCQELGIHNALCV
                     AGDITADKPAYNSSLEVLQTGLFKKYGFREVGVAGHPEGSKAIGEERVEQALRGKAEF
                     AKTAGFNLYFATQFGFEPEPFIAWEAATAAKGIHLPIHVGMPG"
BASE COUNT          393 a          615 c          653 g          323 t
ORIGIN      
        1 gccgcaccgg catcgcagaa tcgaccttcg ggcggcaagc agtaaacgac ggcaaactct
       61 gcgtccgctt acgtaacggc aaggacgtca ccctcgagac cgcggcgaaa attcgcgggt
      121 tcatcggggc ggcgaaagcg cctgagccga cgtcgagcaa caacaagggc acgaccatga
      181 gtggcagcac gaagcgcaaa gcgacgaagg tttccgcaac ggccgacggc aagtccgatc
      241 ggccgtttcg tttttatgac aaccggcaaa agtacttggc gttcgtcaac accacgaacg
      301 agaagtggaa agttgccgag cgtgcgagcc gcgagctcac gctgctgaag ccgaacccgc
      361 cggcgctgcg cctgttcgat gccgggatgg gcgacgcgac cgtgttgtcg cacatcatgc
      421 gcgcgatgca tcgccgcttc ccgatcatgc cgttcttcat cgtcggcaag gagatcagcc
      481 tcgaagacgt gcgcctgtcg ctcgagaagc tcccggatcg gttcatcgag catcccgcca
      541 gcgtcattgt gatcacgaac ctctactacg ccgaagcgcc gtggctgcgg ccgcgcgacg
      601 tgcagatggc tgcggcgctg aactggcgcg aggtcgcgct cgagggcagc tcgtcgtacg
      661 agtatggcga gcaactgcgg tcgctcgatc cgttcctcgt cgacggctgg caggtcaagg
      721 ccagcgagaa gacgggcaac ccgatgtacg tgcggccgtc cgtcctcgtg atctaccgca
      781 aggatcactc gttcttgctc gacgacgtga tcccgaagcc cggccaggtc gcgggcaact
      841 acgacctcgt gatcgcctcg cagccttggc gcgcgcgcat gagcgccgag ttcaaggtca
      901 agaaggtgct ggcgccgttg atccgcagtc tcggccccgc gggccggctg ctggccgtcc
      961 agtcgtgcgg caacgacccg gcgctcgaaa tggtccacga gatttggccc gacgaggagc
     1021 cgttcaaggt gaaccgccac gagctgatca aggtgctgcg cgacgagctg gggcgcgaag
     1081 ctcgcgattt caacttcgtg tcgggctccg atgcgaagtc gatcttccgc tacgagatgc
     1141 acacgttgcc gagcgaggtc tcgcagagca tcggcacttc gacgctgttc gcggcttgga
     1201 acgcggcgag ctacgtcgcg cagatcgagg acgagcgcat cgagaacgcc atgcgcgaag
     1261 gcgaccagta tctgcagggc acggccaaga tcctgaagaa gcacaagggg ctctggttca
     1321 acgacgagag cttcgtggtg tcgaggaagc agtaggcgcg gcggcgagag cacgatgacc
     1381 aacgacgagc tgaaaaaaca catagtcgcg ttcgttcgcg actattcgat cgagatcacg
     1441 ccgcacgatg cgggtaagct cgatgcgatc cgcgcggagc ttgcggaagg cacctgcgtc
     1501 tacgtcgcgc acccgcccgg cgtaccgatc gacgacatcg tgacgttggc gggccaagtg
     1561 cagaagctcg gtctcacggc tacgccgcac gtgatcgcgc gcaagctcga gagccgcgat
     1621 cagctcgagc gtgcgcttag caagtgtcag gagctcggca ttcacaacgc gctctgcgtc
     1681 gccggcgaca tcacggctga caagcccgcg tacaacagca gcctcgaggt gcttcagacc
     1741 gggctgttca agaaatacgg tttccgtgag gtcggcgtcg cgggccaccc cgagggtagc
     1801 aaggcgatcg gcgaggagcg tgtcgagcag gctctgcgtg ggaaggccga gtttgcgaag
     1861 acggccggct tcaacctcta ttttgcgacg cagttcggtt tcgagcccga gccgttcatc
     1921 gcctgggaag ccgcgaccgc ggcgaagggc attcacctgc cgattcacgt cggcatgccg
     1981 ggcc
//
LOCUS       DATCUD010000551         1700 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55236, whole genome shotgun sequence.
ACCESSION   DATCUD010000551 DATCUD010000000
VERSION     DATCUD010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1700
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55236"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VIQ99_08085"
     CDS             <1..318
                     /locus_tag="VIQ99_08085"
                     /inference="COORDINATES: protein motif:HMM:NF025426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4252 domain-containing protein"
                     /protein_id="HEY9183143.1"
                     /translation="YTYEVGANAEDVATRVRETHAELTGDGWLPIASVRDGGEFVAVL
                     LKTGKKHNEGLAVIVAEPEEVTFVNLIGDVRLDFVNGYLADLDVDTPTIEIDPETLQA
                     HAR"
     gene            complement(319..1209)
                     /locus_tag="VIQ99_08090"
     CDS             complement(319..1209)
                     /locus_tag="VIQ99_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012566547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9183144.1"
                     /translation="MKQQGFLGLNTGGFHRLAYTEWGEPNESPTVVCVHGLSRNGRDF
                     DFFAAALQAQRRVVCPDLAGRGRSDWLTDKQTYGFQTYCADLTALLARLGGNSFDWVG
                     TSLGGLIGMVMAAQPNSPIRRLVINDAGPFIPRTAPQRILEYLGKAPPFASIAEAESY
                     LRQTLAPYGKLTDEQWAHLARHGVHAKRDGGYVIAYDPGIAVPMRSARPVDIDMWETW
                     DKIRCPVLLLRGAASDVLSRETAEEMCRRGPPTEFVEFPDVGHAPALMDPKQIEVVTS
                     WLLAPGRPRPAQRTAPAKPR"
     gene            complement(1266..>1700)
                     /locus_tag="VIQ99_08095"
     CDS             complement(1266..>1700)
                     /locus_tag="VIQ99_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183145.1"
                     /translation="PTDPPNLWTGVCHTPIAVTLRDRNRYVDLTGLARIRWVTRVSGF
                     HVVRPVVKLADGNWFVGDYGEGAPSANSTLFLESEFAVASVRWLPLDISRVVTVGQAW
                     ATPDLSRVDEIGFADLLPGSGHGWGGFVNVGRIEVYGRPVRR"
BASE COUNT          297 a          556 c          571 g          276 t
ORIGIN      
        1 tacacgtacg aagtcggcgc caacgccgag gacgtggcta cccgcgttcg tgagacgcat
       61 gccgagctca ccggcgacgg ttggctgccg atcgccagcg tgcgcgacgg cggagagttc
      121 gtggcagtgc tcttgaagac cggtaagaag cacaacgaag gattggccgt gatcgtggcg
      181 gagcccgaag aggtcacgtt cgtgaatctg atcggcgacg tgcgcctcga cttcgtcaac
      241 ggctacttgg cggatctcga cgtcgacact ccgacgatcg agatcgatcc cgagacgctg
      301 caagcgcacg cgcgctagtt agcgcggctt tgccggcgcg gtgcgctgcg cgggtcgcgg
      361 ccgacccggg gccagcaacc agctcgtgac gacctcgatc tgcttcggat ccatcagggc
      421 cggcgcgtgc ccgacatccg ggaactcgac gaattccgtc ggcggtccgc ggcggcacat
      481 ctcctcggcc gtttcgcgcg acagcacgtc ggacgccgcg ccgcgcagca gcagcacggg
      541 gcagcggatc ttgtcccagg tctcccacat gtcgatgtcg acgggccgag ccgagcgcat
      601 cggcaccgca atgccggggt cgtaggcgat cacatagccg ccgtcccgct tcgcgtgcac
      661 gccgtgccgc gcgaggtgcg cccattgctc atccgtgagc tttccgtacg gcgcgagcgt
      721 ctgtcgcaag taactctcgg cctccgcaat cgaggcgaac ggtggggcct tgcccaaata
      781 ctcgagaatg cgctgcggcg cggttcgcgg gatgaagggc ccggcgtcgt tgatcacgag
      841 gcgccggatc gggctgttcg gctgtgcggc catgaccata ccgatcaagc cgccgagcga
      901 agtgccgacc caatcgaacg agttgccgcc gagacgcgcg agcaaggccg tcagatccgc
      961 gcaataggtc tggaagccgt aggtctgctt gtccgtaagc caatcgcttc gtcctcgtcc
     1021 cgcgaggtcc gggcacacca ctcgccgctg tgcctgaagg gccgccgcga agaagtcgaa
     1081 gtcgcgcccg ttgcgactca ggccgtgcac gcagaccacc gtgggactct cgttgggctc
     1141 gccccattcg gtgtaggcga ggcggtgaaa tccgccggtg ttcagaccga gaaatccctg
     1201 ctgcttcaag ctcgagctcc ttggctgttc cccgcgaccc gcgggcgtgt gcggggtgcg
     1261 cgtgattacc gtcgaaccgg tctgccgtaa acctcgatcc gaccgacgtt cacgaatcca
     1321 ccccagccgt gtccgctgcc gggtaggaga tccgcgaatc cgatctcatc gacgcggctc
     1381 aaatccggtg tggcccaggc ttggcccacg gtcacgacgc gcgagatgtc gagcggcagc
     1441 catcgcacgg acgcgacggc gaactcggat tccaggaaca aggtggagtt ggcggaaggc
     1501 gcgccttcac cgtagtcgcc gacgaaccaa ttgccgtcgg cgagcttcac gacggggcgc
     1561 acgacgtgaa agcccgatac gcgcgtgacc cagcggatcc gcgcaagtcc cgtgagatcg
     1621 acgtatcgat tgcggtcgcg aagcgtaacc gcgatcgggg tatggcagac gccggtccaa
     1681 aggttcggtg gatcggtcgg
//
LOCUS       DATCUD010000552         2193 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_90752, whole genome shotgun sequence.
ACCESSION   DATCUD010000552 DATCUD010000000
VERSION     DATCUD010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90752"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VIQ99_08100"
     CDS             complement(<1..407)
                     /locus_tag="VIQ99_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008898326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9183146.1"
                     /translation="MWLSDISVKRPVFATVLSMLLLAIGALSFRDLTVRENPDTVAPT
                     VQVQVGYPGANAEVIETRITQVLEAELSGIEGVKNIRSQSRDGQASLTIEFYLDRNLD
                     EAANDVRDRVSRVSRRLPDDADQVSVQKADADS"
     gene            complement(422..1663)
                     /locus_tag="VIQ99_08105"
     CDS             complement(422..1663)
                     /locus_tag="VIQ99_08105"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9183147.1"
                     /translation="MLAASALSPRMLGMEAELTNPLRFRTEVMKNALLIVLAFALGGG
                     AMWYFTHSRETASGSGGAGARPGGGGGFAPGGRPQAQPPLVTVGRATRDKLFDAVEAL
                     GTAQANESVTLTAKVTDTVRRVNFEDGDYVEAGAVLVELTNQEEEALLAEARANLDDA
                     ESQLRRLEDLSSRGLSSASELDVARSRAGAQRARLNSIVARLRDRLIQAPFSGLLGFR
                     QVSPGTMLSPNTAITSIDDISIIKLDFTVPETFLGTMTPGAKIVAKSVSFPGRQFEGT
                     VRTVGSRVDPVTRAITVRAHLENKDGALRPGMLLTVEVVTAERVALVVPESSVFQIQN
                     RAYVYRVDGDIAKQQQIEVGGRRFGVVEVLDGLAEGDLIVVEGIIKLRDGARVRFDAA
                     EAAISETSPGPAEPATADARG"
     gene            1777..>2193
                     /locus_tag="VIQ99_08110"
     CDS             1777..>2193
                     /locus_tag="VIQ99_08110"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEY9183148.1"
                     /translation="MRTPFAKVVTDAVVSITAHVPDDAMSAGLLGTERLGHGVRIRDD
                     GLIATIGYVVHEAENLWIGTRTTVVPGFVVGSDFESGLALVKPSLPLHIPSMEIGRAD
                     TLAIGADVKVVSSGGKEPIVDARVVAKQEFAGRWEYV"
BASE COUNT          371 a          738 c          708 g          376 t
ORIGIN      
        1 tgcgagtcgg cgtcggcctt ctgcacactg acttgatccg cgtcgtcggg gagccggcga
       61 ctcacgcgcg aaacgcgatc gcgcacgtcg ttggccgcct cgtcgagatt gcggtcgaga
      121 tagaactcga tcgtcagcga cgcctgcccg tcacggctct gcgaacggat gttcttgacg
      181 ccttcgatgc cggacagctc ggcctcgagc acctgcgtga tgcgcgtctc gatgacctcc
      241 gcgttcgcgc cgggatagcc gacttgcact tgcacggtcg gcgcgacggt gtccggattc
      301 tcgcggaccg tgagatcgcg gaacgacagg gcaccgatcg cgagcaacag catgctcagc
      361 acggtcgcga aaaccgggcg cttgacagag atgtcggata gccacatgga accgccctcc
      421 cctagccgcg cgcgtccgca gtcgccggct cggccgggcc cggcgacgtc tcgctgatcg
      481 cggcctcggc cgcgtcgaaa cgcacgcgtg cgccgtcacg cagcttgatg atgccttcga
      541 cgacgatcag atcgccctcg gcaaggccgt cgagaacctc gacgaccccg aagcggcggc
      601 cgcccacctc gatctgctgc tgtttcgcga tgtcgccgtc gacgcgatac acgtaggcgc
      661 gattctggat ctggaacacc gagctttcgg gaacgaccag cgcgacgcgc tcggccgtca
      721 cgacctcgac ggtcagcagc atgccgggcc gcagcgcgcc atccttgttc tcgaggtgag
      781 cgcgaaccgt gattgcacgc gtgacggggt cgacgcgcga gcctacggtg cggaccgtgc
      841 cctcgaactg gcgacccgga aagctcacgc tcttcgcgac gatcttcgcg cccggcgtca
      901 tcgtgcccaa gaacgtctcc ggcaccgtga agtcgagctt gatgatcgag atgtcgtcga
      961 tcgacgtgat cgccgtgttc gggctcaaca tcgtgccggg gctgacttgg cggaatccga
     1021 gcagtccgct gaacggcgct tggatcaaac ggtcgcgcaa ccgcgcgacg atgctgttca
     1081 agcgtgcgcg ctgcgcgccc gcgcgtgagc gcgcgacgtc gagctcggac gccgacgaca
     1141 aaccacggct gctcaaatcc tcgagacgac gcaactgact ctcggcgtcg tcgagattcg
     1201 cgcgcgcctc ggcaagcaac gcttcctctt cttggttcgt gagctcgacg agcaccgcgc
     1261 cggcctcgac gtaatcgccg tcctcgaagt tcacgcgccg gaccgtgtcc gtgaccttcg
     1321 ccgtgagcgt gaccgattcg ttggcttggg ccgtgccgag cgcttcgacc gcgtcgaaaa
     1381 gtttgtcgcg agtcgcacga ccgaccgtta cgagcggggg ctgagcctgc gggcgtccgc
     1441 ccggagcgaa tccaccgcca ccgcccggcc gcgcgccggc cccaccggag ccactggccg
     1501 tctcacgact gtgcgtgaaa taccacatcg cgccgccgcc aagcgcaaac gcaagcacga
     1561 tgagcagtgc atttttcatg acttccgtcc taaacctaag cgggttcgtg agctccgctt
     1621 ccatgccgag catgcgggga gagagcgcgc tggccgcgag catcaaaagt atgccactcg
     1681 cgacctttgc gctcgggacg gacactcggc gttttgtctc attttttcta aaggtttcgg
     1741 ctcgcagagg gcaagtcgcg acgttaccat tagggcatga ggaccccatt cgccaaagtc
     1801 gtgaccgacg ctgtcgtgtc gatcaccgcg cacgtgcccg acgacgcgat gagcgccggg
     1861 ttgctcggca ccgagcgcct gggacacggc gtgcgaattc gcgacgacgg ccttatcgcg
     1921 acgatcggct acgtcgttca cgaggccgag aatctgtgga tcggcacacg cactacggta
     1981 gtgccgggtt tcgtcgtcgg ctccgatttc gaaagcgggc tcgcgctcgt gaagccctcc
     2041 ctgccgctgc acatcccgtc gatggagatc ggccgcgccg acacgctcgc gatcggcgct
     2101 gacgtcaagg tcgtgagcag cggcggcaag gagccgatcg tcgacgctcg cgtcgtcgcg
     2161 aagcaggagt tcgcgggccg gtgggaatac gtg
//
LOCUS       DATCUD010000553         1615 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_97961, whole genome shotgun sequence.
ACCESSION   DATCUD010000553 DATCUD010000000
VERSION     DATCUD010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97961"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1615)
                     /locus_tag="VIQ99_08115"
     CDS             complement(<1..>1615)
                     /locus_tag="VIQ99_08115"
                     /inference="COORDINATES: protein motif:HMM:NF013707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEY9183149.1"
                     /translation="AWMDRDTVTYTQMGGEGATWIGQAPFTKTEHVFQNLGDGTYAHS
                     GTLAIRAAVAAGATMTYKILFNDAVAMTGGQPVEGHLTVANVAQQLVGEGVKPIVVVT
                     DHPEKYAGVTGLPPSVAVQHRRELDRLQRELREVRGVSALIYDQTCAAELHRKRKRGI
                     EPTPDRVVVINELVCEGCGDCNVQSNCLSVMALETELGRKRRINQSSCNRDFSCLNGF
                     CPSFVTLKGAKRNPPRPLASAALPSLPEPRQAPLGRVHNVLIAGVGGTGVVTASGLLG
                     LAAHLEGKAVVELDQTGLAQKYGAVLSHVRIASDSNSLHGMRIPAGQVDVLLGADLIV
                     AAGKEPLSMLSPQRSAVVVNTHEEMPATFIRDRDFVFPGQRLLAALRSAARADGVAAL
                     DATRLASALLGDSIGANVMLLGFAFQRGLLPVSGAALYRALELYGRNVDENKLAFDWG
                     RFAAEQPDEIERLATAKEGGQPIATSVEDVIARREEFLEGYQDRAYAQRYRALVDRVA
                     AAERRVRPGSQALAMAVARNYFGVLAYKDE"
BASE COUNT          267 a          561 c          532 g          255 t
ORIGIN      
        1 ctcgtccttg taggcgagca cgccgaagta gttgcgggcg acggccatcg ccaaggcctg
       61 actgccgggg cgcacgcgcc gctccgcggc tgcgacgcga tccacgagcg cgcggtagcg
      121 ttgcgcgtag gcccggtcct ggtacccctc gagaaactct tcgcgccgcg cgatcacgtc
      181 ctccaccgag gtcgcaatgg gctgcccgcc ctccttcgcg gtcgcgagcc gctcgatctc
      241 gtcgggctgc tccgccgcga atcggcccca atcgaacgcg agcttgttct cgtcgacgtt
      301 gcgcccgtag agctcgagcg cgcgataaag cgcggcaccg gacaccggca gcaggccgcg
      361 ttgaaatgcg aaaccgagca gcatgacgtt ggcgccgatg ctgtcgccga gcagtgccga
      421 cgcgagccgt gtcgcatcga gcgcggcgac gccgtccgca cgcgcggccg agcgcagcgc
      481 cgcgagcagg cgctgacccg gaaatacgaa atcccggtcg cggatgaaag tcgcgggcat
      541 ctcctcgtgt gtgttcacga cgacggccga acgctgcggc gagagcatcg acagcggctc
      601 cttgccggcg gccacgatca ggtcggcgcc caggagcaca tcgacctggc ctgccggaat
      661 gcgcatgccg tgcagactgt tggaatccga cgcgatgcgc acgtgcgaca agacggcgcc
      721 gtacttttgc gcgaggccgg tctggtcgag ctccacgacg gccttgccct cgaggtgcgc
      781 cgcaagaccc agcaacccgc tcgccgtgac aacgccggtt ccgccgacgc ccgcaatcag
      841 aacgttgtgc acacggccga gcggcgcctg gcgcggctcc ggcaagctcg gcagcgcggc
      901 cgatgcgagc ggccgcggcg gattgcgctt cgcgcccttg agcgtgacga agctcgggca
      961 gaagccgttc aagcaactga agtcgcgatt gcacgaggac tgattgatgc gtctcttgcg
     1021 accgagctcg gtctcgagcg ccatcacaga gaggcagttc gattggacgt tgcagtcgcc
     1081 gcacccttcg cagacgagct cgttgatcac gaccacacga tccggcgtgg gctcgatgcc
     1141 gcgcttgcgc ttgcgatgga gctcggcggc gcacgtctga tcatagatca gcgccgacac
     1201 gccgcggacc tcccgcagct cgcgctggag ccgatcgagc tcccgccgat gctgcaccgc
     1261 caccgacgga ggcaaacccg tgacgcccgc gtatttctcc ggatgatccg tgacgacgac
     1321 gatcggcttc acgccttcgc cgaccagctg ctgtgcgacg ttggccaccg tgaggtggcc
     1381 ttcgaccggc tgcccgcccg tcatggccac ggcatcgttg aaaaggatct tgtaggtcat
     1441 cgtcgcgccg gccgcgacgg cggcgcgaat cgcgagcgtg cccgaatgcg cgtacgtccc
     1501 gtcgccgaga ttttgaaata cgtgctcggt cttcgtgaac ggcgcttgac cgatccaggt
     1561 agcaccttcg ccgcccatct gcgtgtaggt gaccgtatcg cgatccatcc aagcg
//
LOCUS       DATCUD010000554         3011 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55245, whole genome shotgun sequence.
ACCESSION   DATCUD010000554 DATCUD010000000
VERSION     DATCUD010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55245"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(151..241)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            complement(348..1391)
                     /locus_tag="VIQ99_08120"
     CDS             complement(348..1391)
                     /locus_tag="VIQ99_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183150.1"
                     /translation="MKSSRLYPLSAALLSLAVTGCALHIHRDPDPPQGFRTEAQQPPH
                     APFESFEPTPVILSEPFGNTRSHDLLQLSFRSSGRNGHPDNLVEGQYFRSVEPGRKPL
                     VVVMPIWGTSDYPPRKISEGYARKAGKDAHVIWIYGNAPIFPWSELSSAPTEDAFREL
                     ARDSAERYRSAVVDMRRLVDWAGAQPEIDASRIAFVGFSMSALVTATLLANEPRVSAA
                     VLMMGAAKFADIFSVCGNRAGEVREHVLSTFGWTLDQYHDFFEGLFAPADPVRFPGHY
                     DPDKILMIDAMFDDCMPEASRTALWEITGHPQRMTFLYQHRSAFYSLTPLGLNVSRRE
                     IYRFLDEALVAAP"
     gene            complement(1405..2616)
                     /locus_tag="VIQ99_08125"
     CDS             complement(1405..2616)
                     /locus_tag="VIQ99_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002613759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183151.1"
                     /translation="MLFGEIVIVALQSIRANLFRAILTMLGIIIGVGAVITMLAAGAG
                     AQKRIDDQIAALGANILTVNAAQFFAGGISRDRQTLFVDDVDALIADTRYLDAVVPET
                     QGRGQLKLDNLNTNIRLIGTSPLYASVFNYKLAHGRFFTQAEDEQRKRVIVLGAEIPE
                     RLEVPAEQLVGRTIAVNGQPFEVIGLFESIGGGFGNQSPDASGLIPLRTAEQRVFGRE
                     EIDNINVRVAEGASMERAMVDIERVLRREHKLMPGAANDFSIVDRREFLDTQQEAQET
                     FTMLLASIAGVSLIVGGIGIMNIMLVSVTERTREIGIRMALGATRFSILLQFLVESVT
                     LCLLGGGLGILLGTTAARLLSRFAGWEVFVSPESIGLASAFSIGVGLFFGIWPARRAA
                     RLDPIEALRYE"
BASE COUNT          544 a          968 c          974 g          525 t
ORIGIN      
        1 tgcacgctcg cggccgggcc gatcgaaagg acggtggcga tggagctgcg cttgcgcgcc
       61 acagcggtgt tcatgagcgg acggactccc tgattccgcg ctgccggtga aaacgatagg
      121 gagtgccgcg aagaggcgat gctcgtgcgt gccggcaacc ccgctgtcgt aggactcatc
      181 agagtccgtt agaccggaag ctttgcgtcc ccggctttcg ccgggtttac ccttgatcag
      241 cctgagggac tatggccgag agtgccgtcg gaacgcaagc gaattgttgc cacgaaacga
      301 tgttcggccg cattgttttc gcgttatgtc aaccagtggc gctcgcgtta cggagcggcg
      361 acgagagcct cgtcgaggaa gcggtagatc tcgcgccgcg acacgttgag gccgagtggt
      421 gtcaaggaat agaacgcact gcgatgctga tacaggaacg tcatgcgttg cggatgaccg
      481 gtgatctccc acagcgccgt acgcgatgcc tcgggcatgc agtcgtcgaa catggcatcg
      541 atcatcagaa tcttgtcggg atcgtaatgc cccgggaagc gtacggggtc cgcgggtgcg
      601 aatagtccct cgaagaagtc gtggtactga tccagggtcc agccgaacgt cgacagcacg
      661 tgctcgcgca cttcgccggc gcggttgccg cacaccgaaa agatgtccgc gaacttcgcc
      721 gctcccatca tcaacaccgc ggccgatacg cgcggctcgt tcgcgagcag cgtcgccgtc
      781 accagcgcgc tcatactgaa tcccacgaac gcgattcgcg aagcatcgat ctcgggctga
      841 gcgccggccc agtcgaccaa gcgccgcatg tcgacgacgg cggagcggta gcgctcggcg
      901 ctgtctcgcg ccaactccct gaaggcgtcc tccgtcggcg ccgagctgag ctcgctccac
      961 ggaaagatcg gggcgttgcc gtagatccag atcacatgcg cgtccttgcc ggccttccgc
     1021 gcgtagcctt ccgatatctt gcgcggcggg tagtcgctgg tgccccaaat cggcatcacg
     1081 accacgagtg gcttacggcc gggctccacc gagcggaagt attggccctc cacgagattg
     1141 tccgggtggc cgttgcgccc gctcgatcgg aacgacaatt gcaggaggtc gtggctgcga
     1201 gtgttcccga acggctccga caagatgacg ggcgtcggct cgaacgattc gaacggcgcg
     1261 tgcggcggtt gctgcgcttc cgtgcggaat ccctgcgggg gatcggggtc gcgatggatg
     1321 tgcagcgcac agcccgtgac cgccagcgac aacagggccg cagacagcgg gtagagtcgg
     1381 ctcgatttca cgaataacgc gcgcctattc gtagcgaagc gcttcgatcg gatcgaggcg
     1441 agcggcacgg cgtgcgggcc agatgccgaa gaacaacccg acgccgatgc tgaacgcaga
     1501 cgcgaggccg atcgattcgg gcgacacgaa cacctcccag cccgcgaacc gcgacaacag
     1561 gcgtgccgct gtcgtgccga gcaggattcc gagcccgccg ccgagcaggc acagcgtcac
     1621 ggactcgacg aggaattgca gcaagatact gaaacgcgtg gcgccgagcg ccatgcggat
     1681 gccgatctcg cgcgttcgct ccgtgacgct cacgagcatg atgttcatga tgccgatacc
     1741 gccgacgatc aggctcacgc ccgcgatact cgcgagcagc atcgtgaaag tctcctgcgc
     1801 ctcctgctgc gtgtcgagga actcgcgccg atcgacgatc gagaaatcgt tggccgcgcc
     1861 gggcatgagc ttgtgctcgc ggcgcagcac gcgctcgata tccaccatcg cgcgctccat
     1921 cgatgcgccc tcggcgaccc gcacgttgat gttgtcgatt tcctcgcgcc cgaatacgcg
     1981 ctgctccgcc gtgcgcagcg ggatcaggcc cgaagcgtcg gggctctgat tgccgaagcc
     2041 gccgccgata ctctcgaaga ggccgatgac ctcgaacggc tggccgttca cggcaatcgt
     2101 gcgccccacc agttgctctg ccggcacttc caaccgttcg gggatctccg cgccgagcac
     2161 gatcactcgt ttgcgctgct cgtcctcggc ttgggtgaag aagcggccat gcgcgagctt
     2221 gtagttgaac acgctggcgt acaacgggct cgtgccgatc aaacggatgt tcgtgttcag
     2281 attgtcgagc ttgagctggc ctcggccctg cgtctcggga acgaccgcat ccaggtaccg
     2341 cgtgtcggca atcagtgcgt cgacgtcgtc gacgaacagc gtttgccgat cgcgcgagat
     2401 gccgcccgcg aagaactgcg cagcattgac cgtcaggatg ttggcgccga gcgccgctat
     2461 ttggtcgtcg atgcgcttct gcgcgccggc acccgcggcc agcatcgtga tcacggcgcc
     2521 cacgccgatg atgatgccga gcatcgtcag gatcgcgcga aacaggttcg cacgaatcga
     2581 ctggagcgcg acaatgacga tttcaccaaa cagcatcggt agcggcctga ctcgagactg
     2641 cgcctaacct aggcagcgcc gaggcacggg tcaagcctag gtactcaatt tttctgcagg
     2701 ttccgattct cgacactttc ggctgcgccc gcgtaccatc ccccgcgtgc gtgcggaaaa
     2761 cggcgaacgc aaagcgtggc gggcagtgaa ggccgggctc cggttgtgct cgctccgtaa
     2821 tgtcacgacg atcgtttgcg gcgttggctt ggtattcctg ccggtcgtgc aggggcccgc
     2881 gagcagcgga gtctcgctgc tgccgtatgc gccccagtat ccgcaccagg cccacggcta
     2941 ccaactggcg ctgactcgtc tgcagcacaa ccctccggcg caggagtggc tcgcggcggc
     3001 ggatctcgcg c
//
LOCUS       DATCUD010000555         2008 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61910, whole genome shotgun sequence.
ACCESSION   DATCUD010000555 DATCUD010000000
VERSION     DATCUD010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61910"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..242
                     /locus_tag="VIQ99_08130"
     CDS             <1..242
                     /locus_tag="VIQ99_08130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183152.1"
                     /translation="HSDRLHVVERFTLDPTTHALKRDYTAEDPVNFTDQYAGSDIVMV
                     ADAPFAEDKCEELTYRNYSLDAEQSGAEQGGAGPR"
     gene            271..927
                     /locus_tag="VIQ99_08135"
     CDS             271..927
                     /locus_tag="VIQ99_08135"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HEY9183153.1"
                     /translation="MKVSRERINAAATAAFRDTTETLGRGCNAASCAALCQRHNTVIE
                     AEMETLERGGAAVACRSGCDFCCHQRVSVLPHEAFALLNHLRTRATAAEAAVIEQRIR
                     DNALKIDGMTLSEHYAANLACAFLIDGRCAAYAARPSVCASFHSLSRERCEYSFNHPK
                     EIGTPRNSRPALLQLTAFTDALIEATQAGTAVAGFPNGKEELHQAVRALLDTPAYAED
                     "
     gene            complement(968..1693)
                     /locus_tag="VIQ99_08140"
     CDS             complement(968..1693)
                     /locus_tag="VIQ99_08140"
                     /inference="COORDINATES: protein motif:HMM:NF025217.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY9183154.1"
                     /translation="MTSSLTKKTALFVSIIGIATSSWAAVAPDFMQKLTAESRPLEDR
                     VRDGARRPYQVMQVLGVDAGMTLLDVGAGGGWFTRVLSAATGPSGKVIAQFGARALQR
                     EDGKAEKDLAAALGNTEAFFGNVADIPANSIDAAVTALNMHHMNAERAGPYLKDIFNA
                     LKPGGRVAIIDHVGLREIDNSRLHRIVPDDVRTWATQAGFEVVVDSDILRTTADDHKL
                     SADDPILARDVDQFLFVARKPQR"
     gene            complement(1762..>2008)
                     /locus_tag="VIQ99_08145"
     CDS             complement(1762..>2008)
                     /locus_tag="VIQ99_08145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HEY9183155.1"
                     /translation="VAATLRAPVPNLRTLTQRYGEFPADHVASYIDGRSLPAAHGARE
                     MPVWGGVFDATGRIVPGAESAPERIDAVVTFLRDLQE"
BASE COUNT          351 a          652 c          662 g          343 t
ORIGIN      
        1 cgcacagcga tcgcttgcac gtcgtcgagc gtttcacgct cgatcccacg acgcacgcgc
       61 tgaagcgcga ctacaccgcc gaggatcccg tgaacttcac ggaccagtac gcgggctcgg
      121 acatcgtgat ggtcgcggac gcgccgttcg cagaggacaa gtgcgaggag ctcacgtacc
      181 gtaattattc gctcgacgcg gagcaaagcg gagcggagca gggcggagcg gggccgcgct
      241 agccatagca tcggtgtgcg agacatcgcg atgaaagtct cgcgcgaacg aatcaatgcc
      301 gccgccaccg ccgcgtttcg cgatacgacc gagacgctcg ggcgcggctg caacgccgct
      361 tcgtgcgcag cgctgtgcca acggcacaac accgtcatag aagcggagat ggagaccctc
      421 gagcgaggtg gcgcggccgt ggcctgtcga tcgggctgcg acttctgctg tcaccaacgc
      481 gtgagcgtgt tgccgcacga agcttttgcg ctgctcaacc acctccgaac acgtgcaaca
      541 gcggccgagg cggccgtgat cgagcagcgt atccgcgaca acgcactcaa gatcgatggc
      601 atgacgcttt ccgagcacta cgcggcgaac cttgcgtgcg cgttcctgat cgacgggcgg
      661 tgtgccgcct atgcggcgcg gccgtcagtc tgcgcgagtt tccactcgct gagccgggag
      721 cgttgcgagt attcgttcaa tcatcccaag gaaatcggca cgccgaggaa cagccggccg
      781 gcgttgctcc agctcacggc tttcacggac gcgctgatcg aagcgacaca agcgggcacc
      841 gccgtcgcgg gcttcccgaa cgggaaggaa gagctgcatc aggcggtgcg cgcattgctc
      901 gacactccgg cctacgccga agattgacgt gccggcgggg cttccgccgg cgcttccagt
      961 gagtgctcta ccgttgcggc tttctcgcga cgaacaggaa ctggtcgacg tcgcgcgcga
     1021 ggatcgggtc gtcggccgac agcttgtgat cgtctgcagt cgtgcggagg atgtcggaat
     1081 caacgacgac ctcgaacccg gcctgagtcg cccaggtcct cacgtcgtcg ggaacaatgc
     1141 gatgcaaccg cgagttgtcg atctcgcgca accccacgtg atcgatgatc gcaacgcgcc
     1201 cacccggctt cagcgcgttg aagatgtcct tcaggtacgg cccggcgcgt tctgcgttca
     1261 tgtggtgcat gttcagtgcg gttaccgcgg cgtcgatgct gttcgcgggg atgtcagcga
     1321 cgttgccgaa gaacgcttcg gtgttgccga gcgccgcggc gaggtccttc tccgccttac
     1381 cgtcctcgcg ctgtagcgcc cgcgcaccga attgtgcaat gaccttgccg ctcggccccg
     1441 tggcggccga cagcacgcga gtgaaccaac cgccgccggc gccgacgtcg agcagtgtca
     1501 ttcctgcgtc gacacccagg acctgcatga cttggtaggg ccggcgcgct ccgtccctga
     1561 ctcgatcctc gagcgggcgc gactcggccg tcagtttctg catgaagtcc ggtgcgacgg
     1621 cggcccacga gctggttgcg ataccgatga tcgaaacgaa gagagcggtc ttcttggtca
     1681 gggacgaagt catgtgtgag tctcctggtg atcgttgtgc ggccgagtat accggcccga
     1741 aagaacagaa gaggcggcga cctactcttg gagatcgcgc aggaacgtca cgactgcatc
     1801 gatgcgttcc ggcgcgctct cggcgcccgg cacgatacgt cctgtcgcat cgaacacgcc
     1861 gccccacacc ggcatctcgc gtgcgccgtg cgccgcgggc aggctgcggc catcgatgta
     1921 gctcgcgacg tggtcggccg gaaactcgcc gtagcgctgc gtcagtgtgc gcagattcgg
     1981 cacgggcgcg cgcagcgtcg ctgcgacc
//
LOCUS       DATCUD010000556         2025 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33904, whole genome shotgun sequence.
ACCESSION   DATCUD010000556 DATCUD010000000
VERSION     DATCUD010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2025)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2025)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2025
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33904"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            9..175
                     /locus_tag="VIQ99_08150"
                     /pseudo
     CDS             9..175
                     /locus_tag="VIQ99_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012173556.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2442 domain-containing protein"
     gene            complement(172..>2025)
                     /locus_tag="VIQ99_08155"
     CDS             complement(172..>2025)
                     /locus_tag="VIQ99_08155"
                     /inference="COORDINATES: protein motif:HMM:NF014740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate sugar
                     epimerase/dehydratase"
                     /protein_id="HEY9183156.1"
                     /translation="LPGWVWLIPPLVGVSSLGLAGFYRSVVRFMGFELVAAAFKTLTL
                     VTLVLGLAIVANATWMDAVRVSATFWLLGMVYVVGGRLTVRWLLQTRNAAGDRVVIYG
                     AGDAGAHLVTALQGRGEFVPVAFVDDNATLRNAVINGLAVHPPQHLTSLIEEFGVSRV
                     LLALPSVSRRRRLEIINQLEHLPLHVQTMPDTADLAAGNAHVDDIREVDITDLLGRDA
                     VPPNPKLLDASIRGKAVMVTGAGGSIGSELCVQIAQLGPKRLVLLDISEAALYTIDQA
                     LQDLAQRKELHVEIVALIGSAHHRDRVREVLETYNVETVYHAAAYKHVPLVEHNMIEG
                     VHNNVFGTLHTAEAAIAAGVKSFVLVSTDKAVLPTNVMGATKRCAELVLQGLNQRGSA
                     TTFSMVRFGNVLASSGSVVPLFREQIRHGGPVTVTHPEIYRYFMTIPEAASLVLQAGS
                     MGTGGDVFVLDMGKPVRIRDLAEKMIHLMGFTIRDEDHPDGDIEVRYTGLRPGEKLYE
                     ELLIGNNVAGTEHRSIMRAEEDFLPWDELKPLLDGLWGACQRLDCTKAREILLRVVVG
                     YSPTKEVEDLVWRQRNTGTRVAVGGKVTPLEPRRVGAGVAGVLPGQGERPH"
BASE COUNT          333 a          721 c          668 g          303 t
ORIGIN      
        1 ccgttgacct gcggccgctg gctcaaagcg ttcgattcac ggaccgcgac atcgtcgtcg
       61 agctcgttga cggccgcacg agctgctcgc cggcggcgaa ggcatccact ggcccgacat
      121 cgacgaagac ctcagcgtcg cgggcttgct gagaggcgac cccgccgagg cctagtgcgg
      181 cctctccccc tgccccggca acacgccggc cacgcccgcg cccacccgcc gcggctcgag
      241 cggcgtaacc ttgcccccga ccgccacgcg cgtcccggtg ttccgctgcc gccagaccag
      301 gtcctcgacc tctttggtcg gcgagtagcc gaccacgacg cggagcagga tctcgcgcgc
      361 cttcgtgcag tcgaggcgct ggcacgcgcc ccagagcccg tcgagcagcg gcttcagctc
      421 gtcccacggc aggaagtcct cctcggcgcg catgatcgag cggtgctcgg tccctgcgac
      481 gttgttgccg atcaggagct cctcgtagag cttctcgccg ggacgcaggc cggtgtagcg
      541 cacctcgatg tcgccgtccg ggtggtcctc gtcgcgaatc gtgaacccca tcaggtggat
      601 catcttctcg gccaggtcgc ggatccgcac gggcttgccc atatcgagca cgaacacgtc
      661 gccgccggtg cccatcgagc cggcctggag cacgagcgac gcggcttcgg ggatcgtcat
      721 gaaatagcgg tagatctcgg ggtgcgtgac cgtgaccgga ccgccgtgcc ggatctgctc
      781 gcggaacagc ggcaccacgg agcccgacga cgcgagcacg ttgccgaacc gcaccatcga
      841 gaacgtcgtc gccgagccgc gttggttcaa gccttgcaac acgagctcgg cgcagcgctt
      901 cgtcgcgccc atcacgttcg tcggcagcac ggccttgtcg gtcgacacga gcacgaacga
      961 cttcacgccg gccgcgatcg cggcttcggc cgtgtgcagc gtgccgaaca cgttgttgtg
     1021 cacgccctcg atcatgttgt gctcgacgag cggcacgtgc ttgtacgcgg ccgcgtgata
     1081 cacggtctcg acgttgtacg tctccagcac ctcgcgcacg cggtcgcgat ggtgcgctga
     1141 gccgatcagc gcgacgatct cgacgtgcag ctctttgcgc tgcgccaagt cctgcagcgc
     1201 ctgatcgatc gtgtacagcg cggcctccga gatatccaac aacacgaggc gcttcggccc
     1261 gagctgtgcg atctgcacgc agagctcgga gccgatcgac ccgccggcgc ccgtaaccat
     1321 gaccgcctta ccgcgaatcg aagcgtcgag cagcttcggg ttcggcggca cggcgtcgcg
     1381 gcccaagagg tccgtgatgt cgacctcgcg aatgtcgtcg acgtgggcgt tgccggccgc
     1441 gaggtcggcg gtatccggca tcgtctgcac gtgcagcggc aggtgctcga gctggttgat
     1501 gatctcgagg cgtcggcgac gcgacaccga cggcagcgcc aacagcacgc gcgacacgcc
     1561 gaactcctcg atcaggctcg tcaggtgctg tggcggatgc acggcgaggc cgttgatcac
     1621 ggcgttccgc agcgtcgcgt tgtcgtccac gaacgcgacg ggcacgaatt cgccgcggcc
     1681 ctggagcgcc gtgacgaggt gcgcaccggc atcgccggcg ccgtagatca cgacgcgatc
     1741 gccggccgcg ttacgagtct ggagcagcca gcgcaccgtg agccggccgc cgacgacgta
     1801 gaccatgccg agcagccaga acgtcgccga cacgcgcacg gcgtccatcc aggtggcatt
     1861 cgcgacgatc gcgagcccga gcacgagcgt cacgagcgtc agcgtcttga acgccgcggc
     1921 gacgagctcg aagcccatga accggaccac ggatcgatag aacccggcga gcccgaggct
     1981 ggacacgccg acgagcggcg gaatcagcca cacccagccc ggcaa
//
LOCUS       DATCUD010000557         2474 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_40986, whole genome shotgun sequence.
ACCESSION   DATCUD010000557 DATCUD010000000
VERSION     DATCUD010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2474
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40986"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..702)
                     /locus_tag="VIQ99_08160"
     CDS             complement(<1..702)
                     /locus_tag="VIQ99_08160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183157.1"
                     /translation="MKAIARFIYTSFTGTALLRAITPIGLIAGIVGSVLLLYFPPLAG
                     GSGNPSRMSLALESFFWLLPIAGVLCFTFGASLLPALFARFASSHYLYVLPYGRSKLL
                     ASAFATVALPSLFAAGIVTTYYYRMPFALDLIFQRALAVSFVTASFLYVVLWLTAKSG
                     TIGLLIGSFVMVATLLFPLRFIAIPSTSLVVPWTACALLWVTFAAAFLLAPRLKAPIG
                     RFRHALAGLTGSSYRG"
     gene            complement(699..1577)
                     /locus_tag="VIQ99_08165"
     CDS             complement(699..1577)
                     /locus_tag="VIQ99_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019676198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183158.1"
                     /translation="MNSPYIAAHGLGKSFGGKPVLSDVSFTVEPGDVVGVLGKNGAGK
                     TTLLELVLGFTPATAGGVHLFGYDSYRLPGAAKARVGFVPQQDELVNQLTAADQIGVI
                     SSFYPKWDDALVGRLSEEWEVDLTQRVKNMSVGQRQKLSILLGLGHRPDVLILDEPVA
                     SLDPVARRQFLEQIIEVAADGNRSVVFSSHIVSDVERLANKIWILKDRRMYWQGDFDS
                     LKDSIVRLHARSTRPLPASLEIPNALSVQRDGTTATAIVQGWSADMHDGLARQLDAEI
                     EIEQLTLEEIFLELHR"
     gene            complement(1540..1950)
                     /locus_tag="VIQ99_08170"
     CDS             complement(1540..1950)
                     /locus_tag="VIQ99_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019676200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY9183159.1"
                     /translation="MFILKPHSGVPIYRQLLEQVRRMAASGQLPPGTELPSIRELALK
                     HAINPMTVSKVYTLLEAEGVLERNRGKPMTIATPERTQTPLANRLEQLEPHVEQVALA
                     ARQLELTEKDVVKALHNAWEKNDEQPVHRRTRPR"
     gene            2077..>2474
                     /locus_tag="VIQ99_08175"
     CDS             2077..>2474
                     /locus_tag="VIQ99_08175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012828260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HEY9183160.1"
                     /translation="MIDDPIAVLCVLLGLLALLFALAGHARLGRVFKVVPLLVFAYFV
                     PTLLSNLGVIPLESPLYAFIRSWLLPASLVLLVLCADIPSILRLGRPAVILFLTATAS
                     VVLGGPIAYFTLGWLVPPELGDEAWKGLAAL"
BASE COUNT          431 a          783 c          815 g          445 t
ORIGIN      
        1 gcctcggtag ctcgagcccg tgagccctgc cagcgcgtgg cggaatcggc cgatcggtgc
       61 cttgagacgc ggtgcaagca aaaaggccgc ggcgaacgtg acccacaaca gcgcgcacgc
      121 agtccatgga acgacgagcg aggtcgacgg aattgcgatg aagcgcagcg ggaacaagag
      181 cgtcgcgacc atcacgaagg aaccgatcag cagcccgatc gtgccgctct tggccgtgag
      241 ccacagcact acgtacagaa agctggcggt gacgaacgag acggctagcg cccgttggaa
      301 tatcaagtcg agcgcgaacg gcattctgta gtagtacgtc gtgacgatgc cggccgcgaa
      361 cagcgagggc agcgcgaccg tagcgaatgc gctcgccagc agcttgctgc ggccgtacgg
      421 tagaacgtag aggtagtggc tcgacgcaaa ccgcgcgaat agcgcgggca gcagcgacgc
      481 gccgaacgtg aagcagagca cgccggcaat cggcagcagc cagaaaaagc tttccagagc
      541 caacgacatg cgggacggat taccgctgcc gcctgcgagc ggcgggaagt agagaagcag
      601 caccgacccg acgatgccgg cgatcagccc gatcggcgtg atcgcgcgca gcagcgccgt
      661 gcccgtaaag ctcgtataga tgaaccgcgc gatcgccttc atcgatgcag ctccaagaag
      721 atctcctcga gcgtgagttg ctcgatctcg atctcggcgt cgagctgccg agccaggccg
      781 tcgtgcatgt cggcgctcca gccttgcacg atcgcggtcg ccgtggtgcc gtctcgctgc
      841 acgctgagcg cgtttggaat ttcgagcgag gcgggcaggg gccgcgtgga gcgcgcgtgc
      901 aatcgcacga tcgaatcctt cagcgagtcg aagtcgccct gccagtacat gcgccggtcc
      961 ttgagtatcc agatcttgtt cgcgagccgc tcgacgtcgg acacgatgtg cgacgagaac
     1021 acgacggacc ggttgccgtc cgcggcgacc tcgatgatct gctcgagaaa ttgccggcgt
     1081 gcgaccgggt cgaggctcgc gacgggctcg tcgaggatca acacatcggg tctatgaccg
     1141 agcccgagca ggatcgacag cttctgccgc tgaccgaccg acatgttctt gacgcgctgc
     1201 gtgaggtcga cctcccactc ctcgctgagg cggcccacga gcgcgtcgtc ccacttcgga
     1261 taaaaagacg agatcacgcc gatctgatcg gcggccgtca gctggttcac gagctcgtct
     1321 tgttggggca cgaagccgac ccgcgctttc gccgctccgg gtaggcggta gctgtcgtag
     1381 ccgaacaggt gcacgccgcc ggccgtcgcg ggagtgaagc cgagcacgag ctcgagcagc
     1441 gtggtcttgc cggcgccgtt cttgcctagc acgccgacca cgtcgccggg ctcgacggtg
     1501 aacgagacgt cggagagaac cggcttgccg ccgaacgact taccgaggcc gtgtgcggcg
     1561 atgtacgggc tgttcatcgt tcttctccca agcgttgtgc aaagctttga cgacatcctt
     1621 ttcggtgagc tcgagctgcc gagccgcgag cgcgacctgc tctacgtgcg gctcgagctg
     1681 ctccagccgg ttcgcgagag gcgtctgcgt gcgctccggc gtcgcgatgg tcatcggttt
     1741 gccgcgattg cgctcgagca cgccttccgc ctccagcagc gtgtagacct tggagaccgt
     1801 catcggattg atcgcatgct tcagcgcgag ctcgcgaatc gatggtagct ccgtgcccgg
     1861 aggcaattgg ccgctcgccg ccatgcggcg gacctgctcg agtagctgcc gatagatcgg
     1921 cacacccgag tgcggcttca agatgaacaa acgttgccac cttccaactg cattagtgca
     1981 ataatgcaca atggctcgat cgtgtcaatc gattggcgcg cgcggcgatc gaaaatgcgg
     2041 ggcgcgtcac gcgctgctct ctgctagggt gggcccgtga tcgacgatcc gatagcggtg
     2101 ttgtgcgtcc tgctcggtct gctggccctg ctttttgccc tcgccgggca cgcgcgcttg
     2161 ggacgcgtct tcaaggtcgt gccgctgctc gtgttcgcgt atttcgttcc gacgctgctc
     2221 tcgaacttgg gcgtgatccc gctcgagtcg ccgctctacg ctttcatccg gagctggctg
     2281 ctgcccgcga gcctcgtgct gctcgtgctg tgcgccgaca ttccttcgat cctacgcctg
     2341 ggtcggccgg ccgtgattct gttcctgacg gcgactgcga gcgtcgtgct cggcggtccg
     2401 atcgcctatt tcacgctcgg ttggctcgtg ccgcccgagc tcggcgacga ggcttggaag
     2461 gggctcgcag cgct
//
LOCUS       DATCUD010000558         2384 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48062, whole genome shotgun sequence.
ACCESSION   DATCUD010000558 DATCUD010000000
VERSION     DATCUD010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2384)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2384)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2384
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48062"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2357)
                     /locus_tag="VIQ99_08180"
     CDS             complement(<1..2357)
                     /locus_tag="VIQ99_08180"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183161.1"
                     /translation="MAVAAALPAIAQDPPQPGGQEEIIVTGSRVSRSGFDSSQPLTTI
                     DSQQIENLGLVNVGDVVRTLPQNTPFFTETNVGIGNFNVGAQLANLRGLNPFFGTRTL
                     TLVDTRRVVPTTEGGAVDLTLIPSMLVERTEVVTGGASAQYGSDAIAGVVNVILDKDL
                     DGVKAQIDYGQTAESDGGDTHASFAWGTAFADDGRGHVIAGLEYQKQDRIGPCSYTRD
                     WCAEGWGIENNTLYSTGNGRPQFNLAPNAKQTTSEYGLITPCTNAACTTTNGLPLTFN
                     ATGTAVSSFNLGSPGLGFATRIGGDGALLGYGTSNVRPEVERYSGMAHLSFDISDRLN
                     YFAEIAYSSSDALGTPANGGLGPTGLRIQPDNAFLTPAVSAALGPFGGQLARIFMPDV
                     INALNTTDNETTRLVTGLEGDLGSKWTWDVYYQHGKNENQQRLYNNMVGSLAGAAVRQ
                     YDFLRWALDAVVNPANPAQIICRATIPGDPTFSANAAGCVPLNIFGNGNASPAALQYV
                     FRTLKEDNEYTQDAVGVNFRSTIAEGWAGPIALATGLEWRSDEAETTHDLANQPWYSS
                     YLLSYGLDRGGTIDVFEVYGELDVPMTQRFHTNFSARQTQNEATSAQSSSITGDHTFA
                     SWKVAGIYDPLEWLRFRATVSRDVRAAGFRELFLPRTTTIGFATVTNPWTVPPGQTDT
                     SFAATAGGNPNLEPEEADTKTLGAVFSFDRFRVSADWFEIDLANAITQSPGNQPLVNA
                     CFTSGGTGAACDRVTGWGTSDITAIDSGAMNLAGFLTRGWDYEATL"
BASE COUNT          388 a          758 c          795 g          443 t
ORIGIN      
        1 agagtcgcct cgtagtccca acccctcgtc aagaacccag ccaggttcat cgcaccggaa
       61 tcgatggctg tgatgtcgct tgtcccccag ccagtgacac ggtcgcacgc ggcgccggtg
      121 cctccgctcg tgaagcacgc gttgacgagc ggctggttgc ctgggctttg cgtgattgca
      181 ttggccaagt cgatctcgaa ccaatcggcc gagacgcgga accgatcgaa cgagaacacg
      241 gcgcctaacg tcttcgtatc cgcctcttcg ggctcgagat tggggttgcc gcccgcggtc
      301 gccgcaaagc tggtgtcggt ctgccccggg ggcactgtcc aaggattggt gaccgtagcg
      361 aagccgatcg tcgtcgtgcg cggcaggaag agctcgcgga agccggctgc gcgtacgtcg
      421 cgtgaaaccg tcgcgcggaa ccgcaaccac tcgagcggat cgtagatgcc ggccaccttc
      481 cagctcgcga acgtgtgatc gcccgtgatc gacgagctct gcgcgctcgt cgcctcgttc
      541 tgcgtctggc gcgccgagaa gttcgtgtgg aacctttgcg tcatcggcac gtcgagctcc
      601 ccgtacacct cgaacacgtc gatggtgccg ccgcggtcca gaccgtatga aaggaggtac
      661 gagctgtacc aaggctgatt cgcaaggtcg tgcgtcgtct cggcttcgtc ggaccgccac
      721 tcgagccccg tcgcgagcgc gatcgggccg gcccagcctt cggcgatcgt gctgcggaag
      781 ttcacgccga ccgcatcttg cgtgtattcg ttgtcttcct tgagcgttcg aaacacgtac
      841 tggagtgccg cggggctcgc gttgccgttg ccgaagatat tcagcggtac gcaaccggcc
      901 gcgttcgcgc tgaacgtcgg atcgccgggt atcgtcgcgc ggcagatgat ctgagccggg
      961 ttggccggat tgaccacggc gtcgagcgcc caccgcagga agtcgtactg cctgacggcg
     1021 gcgccggcga ggctgccgac catgttgttg tagaggcgct gctggttctc gttcttgccg
     1081 tgctggtagt agacgtccca cgtccacttg ctaccgaggt caccctcgag accggtcact
     1141 aagcgcgtgg tctcgttatc ggtcgtgttg agagcattga tcacgtccgg catgaaaatg
     1201 cgcgcgagtt ggccgccgaa cggaccgagc gccgcggaaa cggccggcgt gaggaacgcg
     1261 ttatcgggct ggatacgcag gccggtcggc ccgaggccgc cgttcgccgg cgtgccgagc
     1321 gcgtcgctgc tcgagtaggc aatctccgcg aaatagttga gacggtcgct gatgtcgaag
     1381 ctcaaatgcg ccatcccaga gtagcgctcg acctcgggcc ggacgttcga cgtgccgtac
     1441 ccgagcagcg cgccgtcgcc gccgattcgc gtcgcaaagc cgagacccgg agatcccaga
     1501 ttgaatgacg agaccgccgt gccagtggca ttgaacgtga gcggtaagcc gttcgtggtc
     1561 gtgcacgcgg cgttcgtgca cggcgtgatg aggccgtact ccgaggtcgt ctgcttcgcg
     1621 ttgggggcca gattgaattg cggccgccca ttccccgttg agtagagcgt gttgttttcg
     1681 atgccccacc cttcggcgca ccaatcgcgc gtgtatgagc aaggcccgat gcggtcctgc
     1741 ttctgatact cgaggcctgc gatcacgtgg ccgcgcccgt cgtcggcgaa ggccgtgccc
     1801 cacgcgaacg aggcatgcgt gtcgccgcca tcgctttctg ccgtttgacc gtagtcgatc
     1861 tgagctttga cgccgtcgag atccttatcg aggatgacgt tgacgacgcc ggcaatggcg
     1921 tccgagccgt actgcgccga ggcgccgccg gtcacgacct cggtccgttc cacgagcatc
     1981 gacggaatca acgtgagatc gacggcgccg ccctcggtcg tcggaacgac gcgccgcgtg
     2041 tcgacgaggg tcagggttcg cgtaccgaag aacgggttca ggccgcgcag attcgcgagc
     2101 tgcgcgccga cgttgaagtt gccgatgccg acgttcgtct cggtgaagaa cggcgtgttc
     2161 tgcggcaagg tgcgcaccac gtcgccgacg ttgacgaggc cgagattctc gatctgctgc
     2221 gaatcgatcg tcgtgagcgg ctgcgacgag tcgaagccgc tgcggctgac gcgagatccc
     2281 gtcacgatga tctcttcctg cccgcccggc tgcggcgggt cttgggctat cgcgggcagc
     2341 gcggccgcca cggccatcgc aagcacgctc aaggagccga gacg
//
LOCUS       DATCUD010000559         1671 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_33929, whole genome shotgun sequence.
ACCESSION   DATCUD010000559 DATCUD010000000
VERSION     DATCUD010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1671)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1671)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1671
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33929"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1671
                     /locus_tag="VIQ99_08185"
     CDS             <1..>1671
                     /locus_tag="VIQ99_08185"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY9183162.1"
                     /translation="VPGSRLRARMVSVLVLVAITPLVGLYIFSVEFINRGIDNWLSVD
                     VEQSLGEALDLGKTALDLQTRTRLGEVKTFARELADLDRGDLVSQLSAWQASSDALDL
                     AVYGPRSEILAIASVDPGFHEPSYPTEEVLLHLQTQQEYFSVEPLPGGQYQIRIAVVV
                     DAPRRDEFEFVQATFPVDRRLGTLANAVESSYKQVGELIYLRTALKYGFTLTLSLVLL
                     ISLLASVYGAFLFSRRLVTPIQLLMQGTRAVARGDFATRVPTPARDEIGFLVHSFNDM
                     TQRLAKASEDARQSQQQAERERHKLEVVLARLSTGVVSLEPDLRIRTANHAAGAILGV
                     DLETHVGESIVKLAQNRPLLEQFVGVAQGHLQRGDPEWREQIMLRAEGGRRVLMCACT
                     ELPGDTDSPNGYVIVFDDITALLQAQRDAAWGEVARRLAHEIKNPLTPIQLSAERLRR
                     KYLKPEAGEVELLDRATHTIIQQVEAMKQMVNAFSEYARTPTMEISRFDLNALITELS
                     ELYAHHEKPLAIALSLSSELPPIEADAGRLRQVLHNLFRNAIEAMEHQS"
BASE COUNT          314 a          532 c          535 g          290 t
ORIGIN      
        1 gtgccgggct cacggctgcg cgcgcgcatg gtctccgtgc tcgtgctcgt cgccatcacg
       61 ccgctcgtgg gcctctacat cttctccgtc gagttcatca acagaggcat cgacaactgg
      121 ctcagtgtcg acgtcgagca aagcctcggc gaggcgctcg atctcggcaa gaccgcgttg
      181 gacttgcaga cgcgcacacg gctcggcgag gtgaagacgt ttgcgcggga gctcgcggac
      241 ctcgatcgcg gagatctcgt gagccagctc agcgcgtggc aggcgtcgag cgacgcgctc
      301 gacctcgcgg tctatggccc aagaagcgag atcctcgcca tcgcctccgt ggaccccggt
      361 ttccacgagc cgagctaccc gaccgaagaa gtgctgttgc acctgcaaac acagcaggag
      421 tacttcagcg tcgagccact gccgggcggg cagtatcaga ttcgaatagc cgtcgtagtc
      481 gacgctcctc gcagagacga attcgagttc gtgcaagcca cgtttccggt cgatcggcgt
      541 ttgggcacgc tcgcaaacgc cgtggagagc agctacaagc aagtcggcga gctgatctac
      601 ttgcgcaccg ccctgaaata cgggttcacg ctgacgttga gcctcgtgct cctgatctcg
      661 ctactggcct ccgtctacgg ggccttcctg ttctcgcgac gcttggtcac accgattcag
      721 ctgttgatgc aagggactcg cgccgtcgcc cgcggcgatt tcgcgacgcg ggtgccgacg
      781 ccggcgcgcg acgaaatcgg ctttctcgtg cactccttca acgacatgac gcagcgtctt
      841 gcgaaggcca gcgaggacgc gcgccaaagc caacagcagg cagagcgcga gcggcacaag
      901 ctcgaggtgg tgttggcacg gttgtccacg ggcgtcgtgt cgctcgagcc ggacctacga
      961 atccgcacgg cgaatcacgc agccggcgcg attctcggcg tcgacctcga gacgcacgtc
     1021 ggcgagtcga tcgtgaagct cgctcagaac cgtccgctgc tggaacagtt cgtcggcgtg
     1081 gcgcagggac atttgcagcg cggcgatccc gagtggcgcg agcagatcat gctgcgcgcc
     1141 gagggaggtc ggcgcgtcct gatgtgcgca tgcacggagc tgccaggaga taccgatagc
     1201 ccgaacggct acgtgatcgt gttcgacgac atcaccgcat tgcttcaggc acaacgcgac
     1261 gccgcgtggg gcgaggtcgc gcggcggctc gcgcacgaga tcaagaatcc actgacgccg
     1321 atccaactgt cggctgaacg actgcggcgc aagtacctga agccggaggc cggcgaagtc
     1381 gagctgctcg atcgtgcgac gcacacgatc attcagcagg tcgaagcgat gaagcagatg
     1441 gtcaacgcgt tcagcgagta cgcgcgcacg ccgaccatgg agatttcgcg gttcgacctc
     1501 aacgcactga ttaccgagct ctccgagctc tatgcacatc acgagaagcc gttggcgatt
     1561 gcgctctcgt tgagctccga gttaccgccg atagaggccg atgccggccg cttgcggcag
     1621 gtgttgcaca acctcttccg caatgcgatc gaggccatgg agcaccagag t
//
LOCUS       DATCUD010000560         3042 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69575, whole genome shotgun sequence.
ACCESSION   DATCUD010000560 DATCUD010000000
VERSION     DATCUD010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3042
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69575"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            549..1910
                     /locus_tag="VIQ99_08190"
     CDS             549..1910
                     /locus_tag="VIQ99_08190"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018139469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEY9183163.1"
                     /translation="MSHVPTQQTSLASVLVRGWMLLTAFAFSASAAAQPNAVPTLAPM
                     IERISPSVVNIAVKTSISSTVQDELLRRYLDVPPEVEGAGSGVIVDAMNGYILTNHHV
                     IANADEITVTLLENRSFAARVVGSDEASDLAVLQIEATSLTSVPFGDSAKVRVGDYVV
                     AIGNPFGFSNTVTSGIVSALGRSGLDNDAFEDFIQTDASINPGNSGGALVNLNGELVG
                     ISSAIISRTGGNVGIGFAIPVNMARAVMDQLIATGSVRRGLLGVVIQDITPEIADVLG
                     LSGNSGALVSKINENSAAEKAGIRIEDVIVTINGTRLRTSGSLKNAIGLLPPGEQVTV
                     GLIRDGREQTVTATLGELAPPSARTATPPRVEQPAFDSVFEGVDLVVNESSSGAPGLL
                     VTRIDPDSPAGRSGLRPGDVITKINRVPVRTLADAVPVVEHARAVLLEIQRAERSELI
                     VLR"
     gene            complement(1894..3003)
                     /locus_tag="VIQ99_08195"
     CDS             complement(1894..3003)
                     /locus_tag="VIQ99_08195"
                     /inference="COORDINATES: protein motif:HMM:NF021535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEY9183164.1"
                     /translation="MAASYRSVVRAKVTHMTRVARMLACCSLVVGLTGCAASYYWQAI
                     HGQIGLMRQREPIEDMIEEPAVDPALKATLTRIAAMRRFAVAKLELPDNDSYTSYVAL
                     ERPYVVWNVVAAEEFSVDPRRWCFPFAGCVAYRGYFEQAAAEQFAAKLAADGLDTHIG
                     GSTAYSTLGYFDDPVLSTMVNGGDQYVASLLFHELAHQKLYVKDDSEFSEAFASVVEE
                     LGTELWLMENGSAADVERYRLRRDRRGEFGELVAAQQARLRALYASAAPPEQLRVEKE
                     RAFATMRSEYEALKAQWGGSGEYDGWFSQSLNNATLAAVATYTQWLPTLRVRARAVGL
                     TAFYRDTEVLAKLDAAEREERLRVWSADAGLSAAR"
BASE COUNT          573 a          989 c          906 g          574 t
ORIGIN      
        1 gccgcgtggc tttgagctca aaggccatgt tcatagtgtg ctcttctctc cccactgctc
       61 ggcacgtcga gtgccgcccc gattttcgac ccccctcagt agcccggctt cgttcctcgc
      121 atttttcggc gcgaaaaact ccccgctggc tgctcgtcgc aaccttgaag ccgtccctga
      181 gttttcgaaa agtagcgaca caagatcttg tgtcgtcgga acgaagatta ggcccgtcaa
      241 gaatctctgt caaggtttta tgacaaagtc tcgcggccta aaatatgtat tataaacaat
      301 gtattacgat atatacctcc gaaatggatg aaaaaaattt cggcgtcacg tattttcggc
      361 gcagacgacg gcgggccaca atatcttgtg ttcaggctat ccgcaggcta tcccccgcca
      421 ggccacagga aattcacagc gcgaggacaa gcttcgtttc accgcagccg ccgcgctgcc
      481 aaactatgcg cagatcgcgc ggcaatgcgc gaagctacac gcgatcgcat caactccggg
      541 tgttctccat gagccacgtc cccactcagc aaacctcact ggcgtccgtg ctcgttcgtg
      601 gatggatgtt gctcacggcc ttcgcattca gcgcgtccgc ggcggctcag ccgaacgcgg
      661 ttccgacatt ggcgccgatg atcgaaagga tctcgccttc ggtcgtgaac atcgccgtca
      721 agacgagcat cagcagcacg gttcaagacg agctgttgcg gcgctacctg gatgttcctc
      781 cggaggtcga gggcgcggga tccggagtga tcgtcgatgc catgaacggc tacatactca
      841 cgaaccacca cgtgatcgcg aacgcggacg agatcacggt cacgctgctc gagaatcgca
      901 gcttcgccgc tcgcgtcgtc ggttccgacg aagcttccga cctcgccgtc ttgcagatcg
      961 aggcaacgag cttgacgagc gtcccgttcg gcgattccgc caaagtgcgt gtcggcgatt
     1021 atgtcgtcgc tatcggtaac ccgtttggtt tttcgaacac ggtgacgtcg ggaatcgtga
     1081 gtgcgctcgg tcgcagcggt ctcgacaacg acgccttcga ggacttcatt cagaccgacg
     1141 cctcgatcaa ccccggcaat tccggcggcg cgctcgtgaa tctgaacggc gagctcgtcg
     1201 gcatcagctc ggcaatcatt tcgcgcaccg gcggcaatgt cggtatcggc ttcgcgatcc
     1261 cggtcaacat ggcgcgcgcg gtcatggatc agctgatagc gaccggaagc gttcgacgcg
     1321 gtctcctcgg agtcgtgatc caagacatca ctcccgagat tgccgacgtg ctcggtttgt
     1381 ccggcaactc cggcgcgctc gtctcgaaaa tcaacgagaa ctctgcggca gaaaaagccg
     1441 gcattcgtat cgaagacgtg atcgtgacga tcaacggcac ccgactgcga acgtccggct
     1501 cgctgaaaaa tgcaatcggc ttgctgcctc ccggtgagca agtcacggtc ggtctgatcc
     1561 gcgacggccg cgagcagacc gtaacggcta cgctcggcga gctcgcgccg ccgtcggctc
     1621 gcacggccac gccgccccga gtcgaacaac ctgcattcga ttccgtgttc gaaggcgtgg
     1681 acctcgtggt caatgagagc tcttcggggg ccccgggatt gctcgtgacg cgaatcgatc
     1741 ccgacagccc ggccgggagg agcggtctgc ggcccggcga tgtaatcacg aagatcaatc
     1801 gcgtgccggt ccggacactt gcggatgccg ttcccgtcgt cgagcacgcg cgcgccgtcc
     1861 tgctcgagat tcagcgggcc gagcgcagcg agctcatcgt gctgcgctga ggccggcgtc
     1921 ggcactccac acgcgcaggc gttcctcacg ctccgccgcg tcgagcttcg cgagaacctc
     1981 cgtgtcgcgg taaaacgccg tgagcccgac ggctcgggcg cggacgcgca acgtgggtaa
     2041 ccactgcgtg taggtagcca cggctgcgag cgtcgcgttg ttcaacgact gcgagaacca
     2101 accgtcgtac tcgccgctgc ctccccattg cgccttcagc gcttcgtatt cgctgcgcat
     2161 cgtcgcgaac gcgcgctcct tctccacgcg cagttgctcg ggaggggccg cgctcgcata
     2221 caacgcgcgc aggcgagctt gttgtgcagc gaccagctct ccgaactcgc cgcggcgatc
     2281 gcgacgaaga cgatagcgct cgacgtcggc cgcagagccg ttctccatga gccagagctc
     2341 ggtgccgagc tcctcgacga cgctcgcgaa cgcttcgctg aactcgctgt cgtccttcac
     2401 gtacaacttt tggtgcgcga gctcgtgaaa cagcagactc gcgacgtatt ggtcgccgcc
     2461 attcaccatc gtgctcagca cgggatcgtc gaaatagccg agcgtcgagt acgcagtaga
     2521 gccgccgata tgagtgtcga gcccgtccgc ggccagcttc gccgcgaact gctcggccgc
     2581 ggcttgctcg aagtagccgc gataagcgac gcagcccgcg aacggaaaac accagcgccg
     2641 cgggtccacc gagaattcct cggccgccac gacgttccac acgacatacg ggcgctcgag
     2701 cgccacgtag gacgtgtagc tatcgttgtc gggcagctcg agcttcgcga ccgcgaaacg
     2761 ccgcatcgcc gcaatccgcg tgagtgtggc tttgagcgcg ggatcgaccg cgggctcctc
     2821 gatcatgtcc tcgatcggct cgcgctgtcg catcagcccg atctgtccat gaatcgcttg
     2881 ccagtagtaa gacgcagcgc accccgtgag ccccacgacg aggctgcagc aagcgagcat
     2941 tcgtgcgacg cgtgtcatgt gcgtgacctt agcacgcacg acgctacggt atgatgcggc
     3001 catgaaagtc tacgaggtgg gtggcgccgt ccgcgacgcg ct
//
LOCUS       DATCUD010000561         1820 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61966, whole genome shotgun sequence.
ACCESSION   DATCUD010000561 DATCUD010000000
VERSION     DATCUD010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1820)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1820)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1820
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61966"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..748)
                     /locus_tag="VIQ99_08200"
     CDS             complement(<1..748)
                     /locus_tag="VIQ99_08200"
                     /inference="COORDINATES: protein motif:HMM:NF015662.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY9183165.1"
                     /translation="MASSLHLKDHWQEQRLFLSRLIAAGIIVLLLTAVLVTRLVQLQI
                     VDYERFSELSQGNRFRIEPLPPNRGLIYDRNGLVIAENRPNWELVAIGEQIEDLDRTL
                     QSLEGLGLIAADEHNSLRDLVRSHRGFERVKLSSLTEEQAATFAVRRHLFSGIDIQEA
                     LARYYPFGEASAHAIGYVGSISTADLERIDRSNYAGTSHIGKTGVERAYEDRLHGQVG
                     YRQLVVNAQGRVLESADTGNDDFQSKAPAPG"
     gene            complement(750..1238)
                     /gene="mreD"
                     /locus_tag="VIQ99_08205"
     CDS             complement(750..1238)
                     /gene="mreD"
                     /locus_tag="VIQ99_08205"
                     /inference="COORDINATES: protein motif:HMM:TIGR03426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEY9183166.1"
                     /translation="MARSPRRWWISGLSLAATLALAVVPLPDVVAPLRPDWVAVVLLY
                     WSLMAQRHFSLLTAFWMGLALDTLSGALLGQNALALLVIVYLAEKFHLRFRVFPVSQL
                     AIVVLLLLGLYEFILFWIDGMAGRTVPLIERWVPPLTGTLVWVAMYSLLDRGEREARA
                     RL"
     gene            complement(1238..>1820)
                     /gene="mreC"
                     /locus_tag="VIQ99_08210"
     CDS             complement(1238..>1820)
                     /gene="mreC"
                     /locus_tag="VIQ99_08210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEY9183167.1"
                     /translation="MENERLRNLLESRGRVGSRALVAEILAVDLDPYRQRFDLNRGFV
                     NGVFVGQALIDAQGVVGQVVRVGPFTSEALLITDADHAVPVSVNRNGLRTIAVGTGDS
                     SRLRLPYLTNNADIVVGDLLISSGLGGVFPAGYPVGRVLEVRLRPDQSFAEVIAEPAS
                     ALDREREVLLVWNSTDEEPPAEETAAVDAAESQ"
BASE COUNT          356 a          622 c          580 g          262 t
ORIGIN      
        1 cgccgggcgc gggcgccttc gactggaagt cgtcgttacc cgtgtcggcg ctctcgagca
       61 cgcgcccttg cgcgttcacg acgagctgac ggtaaccgac ctggccgtgc aatcggtcct
      121 cataggcgcg ctcgacgccg gtcttaccga tgtgcgacgt gcccgcgtag ttgctgcgat
      181 cgatgcgctc caaatccgcg gtgctgatgc taccgacata gccgatcgcg tgcgcgctcg
      241 cctcgccgaa cgggtagtag cgcgccagcg cctcttgaat gtcgatgccg gagaacaagt
      301 ggcggcgcac cgcgaacgtg gccgcctgct cctcggttag gctgctcagc ttcacgcgct
      361 cgaagccacg atgcgagcgg accagatcgc gcagcgagtt gtgctcgtcc gcggcgatga
      421 gcccaagacc ctcgagcgac tgcaacgtgc gatcgaggtc ctcgatctgc tcgccaattg
      481 cgacgagctc ccagttcggc cggttctcgg cgatcacgag gccgttgcga tcatagatga
      541 gcccgcgatt cggcggcagc ggctcgattc ggaaccgatt gccctgcgac agctcgctga
      601 agcgctcgta atcgacgatc tgcaactgca cgagccgcgt gacgagcacc gccgtcagca
      661 agagcacgat gatgccggcg gcgatgagcc gcgacaggaa cagccgctgc tcctgccagt
      721 gatccttgag atgcagcgac gacgccacgc tagagcctcg cgcgcgcttc gcgctcgccg
      781 cgatcgagca gcgaatacat cgcgacccac acgagcgtgc ccgtcaacgg cgggacccag
      841 cgctcgatca gcgggaccgt gcggcccgcc atgccgtcga tccagaacaa gatgaactcg
      901 tagagaccga gcagcagcaa gaccacgatc gcgagctgcg agaccggaaa gactcgaaaa
      961 cggaggtgga acttctccgc gagatagacg atcacgagta gagcgagcgc gttctggccg
     1021 agcaacgcgc ccgacagcgt atcgagcgcc agccccatcc agaacgccgt gagcaagctg
     1081 aaatggcgct gcgccatcag cgaccaatac agcagcacga cggcgaccca atccggccgc
     1141 agcggcgcaa cgacatcggg cagcggcacg acggcgagcg cgagcgtcgc cgcgaggctc
     1201 aatcccgaga tccaccaacg tcgaggcgag cgggccatta ctgcgactcc gccgcgtcca
     1261 ccgcggcggt ctcctcggcc gggggctctt cgtcggtcga attccagacg agcaggactt
     1321 cgcgctcgcg atcgagcgcg gacgccggct cggcgatgac ctccgcgaac gactggtcgg
     1381 gccgtaaacg gacctcgagc acgcggccga ccggatagcc ggccgggaac acgccaccca
     1441 agcccgacga gatcaggaga tcgccgacga cgatatcggc gttgttcgtg agataaggca
     1501 agcgcagccg actgctgtcg ccggtgccga ccgcgatcgt gcgcaagccg ttgcggttca
     1561 cgctgacggg caccgcatga tcggcgtccg tgatcagcaa ggcttccgac gtgaacggcc
     1621 cgacgcgcac gacttgaccg acgacacctt gcgcgtcgat caacgcctgg cccacgaaca
     1681 caccgttgac gaagccgcga ttcagatcga aacgctgacg atacggatcg agatcgactg
     1741 cgagaatctc ggccacgagc gcgcggctgc cgacgcgccc cctcgactcg agcaggttcc
     1801 tgagccgttc gttctccatc
//
LOCUS       DATCUD010000562         3105 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_61972, whole genome shotgun sequence.
ACCESSION   DATCUD010000562 DATCUD010000000
VERSION     DATCUD010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61972"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..633)
                     /locus_tag="VIQ99_08215"
     CDS             complement(103..633)
                     /locus_tag="VIQ99_08215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006786905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEY9183168.1"
                     /translation="MLTRSPFSARWLAVAFVAAGLSACGGANDDLRAYIDEVKARPGG
                     RIDPLPQVQPAPSFVYEPGVRRSPFAPDLPQRRVSNDPNAVDGPDRNRPREFLEQFPL
                     DTLRMVGTLADRRASFGLVQTTDGLVHRVAVGNHMGQNYGRIVAISDSEIQLVEIISD
                     GLGGFLERPAAIALAD"
     gene            complement(633..1238)
                     /locus_tag="VIQ99_08220"
     CDS             complement(633..1238)
                     /locus_tag="VIQ99_08220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEY9183169.1"
                     /translation="MSIVDDLKTLDTSDPGRWPLPIRAGAIGIVFVALAVVGVYMFVI
                     KEEVPLLERAQQTETELRGQFEERQRKAANFDAYRAQLAEIERDFGAMLRQLPGKTEV
                     PSLLVDISQTGLGAGLEEQLFQPTGEVQKDFYAELPIKLRYTGSYHELGTFVSGIAAL
                     PRIVTLHDITIAPLAGGAADELSLDVTAKTYRYLDEQATEG"
     gene            complement(1235..1846)
                     /locus_tag="VIQ99_08225"
     CDS             complement(1235..1846)
                     /locus_tag="VIQ99_08225"
                     /inference="COORDINATES: protein motif:HMM:NF016992.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEY9183170.1"
                     /translation="MPRINLLPWRAELRQQRKKEFLIALAGTVAIAAGVVYVSKITVE
                     GWTRAQEGRNEILRGEIAELDKQIEEITGLESQRERLLARMQVITQLQRSRPEVVHLF
                     DELVNAMPEGVNLTEVVQTGNRIELTGEAQSSTRVSALMRNIDGSEWLRDPTLDVVET
                     RTSGIDRNSEFKLFAQQVSAGTPEGEEAEATPAAGPARGRASR"
     gene            complement(1848..2909)
                     /locus_tag="VIQ99_08230"
     CDS             complement(1848..2909)
                     /locus_tag="VIQ99_08230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006786902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEY9183171.1"
                     /translation="MFATRRKGSLVGLDITTSSVKLIELVSSGRGYRVESYAAEATPP
                     NAINEKAIVDADAVGEAIRRAHKRAGTKTRDAAIAISGDAAITKVIQMPKNLSAADLE
                     GQVELQADQYIPFPMEEVSFDFEVIGDSERDPDMVDVLLVATRTENVEQRQVAVEAAG
                     LQARVVDVEAFAVENACQLLTHQMPDAGADKFIAIVDFGASTTTFSVLKDLKVIYTRD
                     FAFGGQQLTEEIMRTYGLSMEDAGRAKKEGGLPSNYQPEVLDAFIDDMSQQVSRSLQF
                     FLASGSGREQPDQILICGGCANIPGVADVIGSRVGVATQIGDPLGQMKISSRAKSQGV
                     DRDATALLTACGLALRSFD"
BASE COUNT          556 a          997 c          954 g          598 t
ORIGIN      
        1 ccaccatagg ctcgcgaagc ggccgagcca cacagaaata ttctcgcgtc gaatgggcgc
       61 tgacatgttc atgctgttca ctccctaata cttccctgcg attcaatcgg ccaaagcgat
      121 cgcggcgggc cgctccaaga acccaccgag accgtcggag atgatctcca ccaattgaat
      181 ctcagaatcc gagatggcca cgatgcggcc gtagttctgt cccatgtgat tgccgactgc
      241 gacgcgatgc acgaggccgt cggttgtctg aacgagaccg aagcttgcac gacgatcggc
      301 aagcgtgccg accatccgga gcgtgtcgag agggaactgc tccagaaact cgcgcgggcg
      361 attgcgatcc ggcccgtcga cggcgttcgg gtcgttgctg acgcgccgtt ggggcaggtc
      421 cggcgcgaac ggcgagcgcc gcacgccggg ctcgtaaacg aacgatgggg ccggctgaac
      481 ctgaggcaat ggatcgatcc ggccgccggg ccgggccttg acctcgtcga tatacgcacg
      541 caggtcgtcg ttggcgccgc cgcaagcgga caagccggcc gcaacgaagg cgacggcaag
      601 ccaacgagcc gagaacgggc tacgcgtcaa catcatccct ccgtcgcttg ctcatccaga
      661 tagcgatagg tcttcgccgt gacgtcgagg gacaactcat cggcagcccc ccccgccagc
      721 ggcgcaatcg tgatgtcatg taacgtcaca atccggggca atgcagcgat cccgctcacg
      781 aaagtgccaa gctcgtgata gctgccggta taccgcagct tgatcgggag ctcggcgtag
      841 aagtctttct gaacctcacc ggtcggctgg aacaactgtt cctcgaggcc cgcgccgagg
      901 ccggtctggg agatatcgac cagcaggctc ggcacctcgg tcttaccggg caactgccgc
      961 aacatcgcgc cgaagtcccg ctcgatctcg gcgagctgcg cgcggtaagc gtcgaaattc
     1021 gcggctttgc gctgccgctc ctcgaactgc ccgcgcagct cggtttccgt ctgctgagct
     1081 cgctcgagca gcggcacctc ttccttgatc acgaacatat agacgccaac cacggccagc
     1141 gcgacgaaga cgataccgat cgcgccggcg cggatcggca aaggccagcg gcccggatcg
     1201 ctggtgtcga gtgtcttgag atcgtcgacg atgctcatcg tgaagccctc cctcgtgcgg
     1261 gccccgcagc cggtgtggcc tcggcctcct cgccttcggg cgtcccggcc gagacctgct
     1321 gcgcgaacaa cttgaactcg gaattgcggt cgatgcccga ggttctcgtc tccacgacgt
     1381 cgagcgtggg gtcgcgaagc cactcggagc cgtcgatgtt gcgcatcaac gccgaaacgc
     1441 gcgtgctcga ctgcgcttcg ccggtcagct cgatgcggtt acccgtttgc acgacttcgg
     1501 tgaggttcac gccttcgggc atcgcattga cgagctcgtc gaacaggtgc acgacctcgg
     1561 ggcgcgagcg ctgcagttgc gtgatgacct gcatccgcgc gagcaaccgt tcgcgctgac
     1621 tctcgaggcc cgtgatctcc tcgatctgtt tgtcgagctc ggcaatctcg ccgcgaagga
     1681 tctcgttgcg gccttcctgg gcgcgcgtcc aaccctcgac ggtgatcttc gagacgtaga
     1741 cgacgcccgc cgcaattgca accgtgccgg cgagggcgat caggaattct ttcttgcgct
     1801 gctgacgtaa ctcggcacgc cagggaagta agttgattct tggcatgtta gtcgaagctc
     1861 ctcaatgcga gcccgcacgc ggttaggagt gccgtcgcgt cccgatccac gccctgcgac
     1921 ttcgcgcggc tcgagatctt catctgcccc agcggatccc cgatctgcgt cgcgacgccg
     1981 acgcggctgc cgatgacgtc tgcgacaccg ggaatattgg cgcagccgcc gcagatcaga
     2041 atctgatcag gttgctcgcg tccgctgccg gacgccagga agaactgcag cgagcggctc
     2101 acctgttgcg acatgtcgtc gatgaaggca tcgagcactt cgggctggta attgctcggc
     2161 aaaccgcctt ccttcttcgc acggccggca tcctccatgc tcaacccgta ggtccgcatg
     2221 atctcttcgg tgagctgttg cccgccgaac gcgaagtcgc gcgtgtagat gactttgagg
     2281 tccttgagca cgctgaacgt cgtggtgctc gcgccgaagt cgacgatcgc gatgaacttg
     2341 tcggcgccgg catccggcat ctggtgcgtc aatagttggc acgcgttctc gaccgcgaac
     2401 gcttcgacgt cgacgacgcg agcttgcagg cccgccgctt cgacagcgac ctgcctttgc
     2461 tcgacgtttt cggtacgggt ggcgacgagc agcacgtcga ccatgtccgg gtcgcgctcg
     2521 ctgtcaccga tgacctcgaa gtcgaagctg acttcttcca tcgggaacgg gatgtattga
     2581 tcggcttgga gctcgacctg accctcgagg tcggccgcgc tcaaattctt cggcatttgg
     2641 atgaccttcg tgatcgcggc gtcgccgctg atcgcgatgg ccgcgtcgcg ggtcttcgtg
     2701 ccggcgcgct tatgggcgcg gcggatggct tcgccgacag cgtccgcgtc gacgatggcc
     2761 ttttcgttga tcgcgttcgg cggcgtggct tccgctgcgt aggattccac gcgataaccg
     2821 cggccgctcg agacgagctc aatgagcttc accgacgagg tggtgatatc gaggccgacc
     2881 aaggatcctt tgcgacgggt cgcgaacaca gcttttcctt tccaacacga gaggttgggt
     2941 tagaatccta cacgtgcgtt caactggtca atttaactat atctcagcga gatatacacc
     3001 gttgtgacga gcctctcgat accggaatga gcctaaactc cacggtccgg accagccgtc
     3061 cccgaaaatc ccgggtatga ctggattacg taatcggctg cgacg
//
LOCUS       DATCUD010000563         3126 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62001, whole genome shotgun sequence.
ACCESSION   DATCUD010000563 DATCUD010000000
VERSION     DATCUD010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3126)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3126)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3126
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62001"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..300)
                     /locus_tag="VIQ99_08235"
     CDS             complement(<1..300)
                     /locus_tag="VIQ99_08235"
                     /inference="COORDINATES: protein motif:HMM:NF018218.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent metallopeptidase FtsH/Yme1/Tma
                     family protein"
                     /protein_id="HEY9183172.1"
                     /translation="MAKNVILWIVVAVVLWSVVSNFSGPRTGGATPVAYSDFMSWVRE
                     GSVREVVIEDKIIRGKRDNDQTFTTYSPETSNNVLMDELEKSNVRISANPPRQQNF"
     gene            complement(361..984)
                     /locus_tag="VIQ99_08240"
     CDS             complement(361..984)
                     /locus_tag="VIQ99_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019530768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEY9183173.1"
                     /translation="MPRRTGSSQRWRQRQERDIYVEKASRGGWRSRAIFKLEQINTKE
                     RLLVPGTVCVDLGAAPGSWSQLAARLVQPGGRVIAVDILPMDAIPGVDFLQGDFTEPA
                     TLDRLRTLIGSTPVDLVMSDMAPNISGNRTIDQPRSLALLDEALLFATEVLRPGGAFL
                     CKAFQGEGIDALTRQLRSHFGSVKTIKPKASRPESREIYLLARSFGM"
     gene            complement(995..1471)
                     /gene="greA"
                     /locus_tag="VIQ99_08245"
     CDS             complement(995..1471)
                     /gene="greA"
                     /locus_tag="VIQ99_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012637550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEY9183174.1"
                     /translation="MSKVPLTARGAAQLKEELRRLKSEERPKVTAAIATARAHGDLKE
                     NAEYHAAKEQQGLMEARIRDIEAKLANAQIIDVTAVNAGGKVVFGATVHLVDVADGSE
                     ARYQIVGEDEADIKNGLLSIGSPIARALIGKREGDEVEVATPSGKRAYEITAVEYL"
     gene            complement(1468..>3126)
                     /gene="carB"
                     /locus_tag="VIQ99_08250"
     CDS             complement(1468..>3126)
                     /gene="carB"
                     /locus_tag="VIQ99_08250"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012982112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY9183175.1"
                     /translation="VRPVFKRVDSCAAEFASHTAYLYSTYEEFCEADPTDRQKIMILG
                     GGPNRIGQGIEFDYCCVHASFALKDAGFETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVHKEKPKGVIVQYGGQTPLKLAQALEEAGVPIIGTSPDSIDLAEDRERFQQLV
                     HRLKLKQPPNRTARNVDEAVAMAKEVGYPLVVRPSYVLGGRAMEIVHGEDELRDYVDR
                     AVSVSNDSPILLDRFLDLAVEVDVDAICDGNEVVIGGIMEHVEQAGIHSGDSGCSLPP
                     YSLSAETQQALSDQVRQMAQALKVNGIMNTQFAIQNGVIYVLEVNPRASRTIPFVSKA
                     IGQPLAKIAAKAMAGISFKEQGFQAPAKRPYFSVKESVFPFNKFPDADPILGPEMKST
                     GEVMGTGRTFGEAYAKAQFASGVILPRRGLAFISVRDRDKPSVVELGQMLVARGFEIV
                     ATGGTAKALKDGGVPCQRVNKVREGRPHVVDMIKNRELSLIVNTTEGKQAIRESHSIR
                     GEAVHYKVTYYTTLAAAKATCDALDHLDNVVVNRLQDLHAEAPL"
BASE COUNT          550 a         1026 c          909 g          641 t
ORIGIN      
        1 gaaattctgc tgcctgggcg ggttcgccga gattctgacg ttgctcttct cgagctcgtc
       61 catcagcacg ttgttgctgg tctcggggct gtaggtcgtg aacgtctggt cgttgtcccg
      121 tttgccgcga ataatcttgt cttcgatgac gacttcccgg acgctgccct ctcggaccca
      181 gctcatgaag tcggaatacg ccacgggtgt ggcccccccc gttcgcggtc cgctgaagtt
      241 gctgacgacg gaccacaaca cgacggccac gacgatccac aagatgacgt tttttgccaa
      301 gtcgttcaaa gcgttacctc aagccaacgt gcgggaagac ccattccagt cctgacccta
      361 ctacatcccg aagcttctag ccagcaaata aatctcgcgg ctttcaggcc tcgacgcctt
      421 gggtttgatc gtcttcacgc tcccaaagtg cgagcgcagt tgccgagtga gtgcgtcgat
      481 gccttcgcct tgaaatgcct tgcacaagaa cgcgccaccc ggccgcaaca cctcggtcgc
      541 gaacagcagc gcctcgtcga gcagggccag gctccgcggc tgatcgatgg tgcgattgcc
      601 gctgatgttg ggagccatgt ccgacattac aagatcgacc ggcgtcgacc cgatgagcgt
      661 ccgcagcctg tcgagggttg cgggttccgt gaaatcacct tgaaggaagt ccacgccggg
      721 aatcgcatcc atcggaagaa tgtcgacggc gatgacgcgg ccgcccggtt gcacgaggcg
      781 cgccgccagc tggctccaac taccgggtgc cgctccgagg tccacacaga cggtgcccgg
      841 aaccaacaac cgctctttgg tgttgatctg ctcgagcttg aatatcgcac gcgaccgcca
      901 tccgccacgg ctcgcttttt cgacgtagat atcccgctct tggcgttggc gccaccgttg
      961 gctcgaaccc gtgcgccgtg gcatcgaact tgggtcagag gtattcgacg gccgtgatct
     1021 cgtaggctcg cttgccgctc ggcgtggcga cctcgacctc gtcgccctcc cgcttgccga
     1081 tcaacgctcg cgcaatcggc gagccgatcg acaacagccc gttcttgatg tcggcttcgt
     1141 cctcgccgac gatttggtag cgagcctcgc tgccgtctgc gacgtcgacg agatgcacgg
     1201 tcgcgccgaa cacgaccttg ccgccggcat tgaccgccgt gacgtcgatg atctgcgcgt
     1261 tcgcgagctt ggcctcgatg tcgcgaatcc gcgcctccat cagaccctgt tgctccttgg
     1321 cggcgtggta ttcggcattc tccttgaggt cgccgtgcgc gcgtgcagtc gcaatcgcag
     1381 cggtgacttt cggacgctct tcggatttca agcgccgcaa ctcttccttg agctgcgctg
     1441 cgccgcgcgc cgtgagcgga accttgctca caacggcgct tccgcgtgca ggtcttgcag
     1501 acggttcacg acgacgttgt cgaggtgatc gagagcgtcg caggtcgcct tcgccgcggc
     1561 aagcgtcgtg taataggtaa ctttgtagtg cacggcctcg ccgcgaatcg aatgcgactc
     1621 gcgaatcgct tgcttacctt cggtcgtatt gacgatcagg ctgagctcac gattcttgat
     1681 catgtccacg acgtgcggcc gtccttcacg aaccttgttg acgcgctgac acggcacgcc
     1741 accatccttc aatgctttcg cggtaccgcc ggtcgcgacg atctcgaagc cacgagccac
     1801 gagcatttga ccgagctcga ccacgctcgg cttgtcacga tcacggacgc tgatgaacgc
     1861 caacccgcgc cgcggcagga tcacgccgga cgcgaactgc gccttcgcgt acgcttcacc
     1921 gaaggtgcgg cccgtaccca tgacctcgcc cgtcgatttc atctcggggc cgaggatcgg
     1981 atccgcatcc gggaatttgt tgaacggaaa caccgattcc ttgaccgaaa agtaaggccg
     2041 cttggcgggc gcctggaagc cctgctcctt gaagctgatg ccggccatgg ccttcgccgc
     2101 gatcttcgcg agcggctggc cgatcgcctt cgaaacgaac ggaatcgtgc gcgacgcgcg
     2161 cgggttgacc tcgagcacat aaatgacccc gttctgaatc gcaaactgcg tattcatgat
     2221 gccgttgacc ttcagcgctt gcgccatctg ccggacctga tcgctgagcg cttgttgcgt
     2281 ctctgcgctc aagctatacg gcggcaggga gcagccggaa tcgcccgaat ggatgcccgc
     2341 ttgctccacg tgctccatga tgccgccgat gacgacctcg ttgccgtcgc agatcgcatc
     2401 gacgtcgacc tcgaccgcga gatcgaggaa tcggtcgagc agaatcgggc tgtcgttcga
     2461 gacgctcacg gcccggtcca cgtaatcgcg aagctcgtct tcgccgtgaa cgatctccat
     2521 cgcccggccg ccgagcacgt aggacggccg caccacgagc ggatagccga cctctttcgc
     2581 catcgccacc gcctcgtcca cgttgcgcgc ggtgcgattc ggcggttgct tcagcttcaa
     2641 gcgatgcacg agctgttgga agcgctcgcg atcctcggcc aagtcgatcg aatccggcga
     2701 tgtgccgatg atcggcacgc ctgcttcctc gagcgcttgg gccagcttga gcggggtctg
     2761 accgccgtat tggacgatca cgcccttcgg cttttccttg tggacgatct cgagaacgtc
     2821 ctcgagcgtg acgggctcga aatacaaccg atccgacgtg tcgtaatccg tggacacggt
     2881 ctccggattg cagttgacca ttatggtttc gaaacccgcg tccttcagcg caaacgaagc
     2941 gtgcacgcag caatagtcga actcgatgcc ttgcccgatc cgattcggcc cgccgcccaa
     3001 gatcatgatc ttctgccgat ccgtcgggtc cgcctcgcag aattcctcat aggtcgagta
     3061 gagataagcc gtgtggctcg cgaactcggc agcgcaactg tccacgcgct tgaacaccgg
     3121 cctcac
//
LOCUS       DATCUD010000564         2257 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76741, whole genome shotgun sequence.
ACCESSION   DATCUD010000564 DATCUD010000000
VERSION     DATCUD010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76741"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..357
                     /locus_tag="VIQ99_08255"
     CDS             <1..357
                     /locus_tag="VIQ99_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018717041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase RNA specificity
                     domain-containing protein"
                     /protein_id="HEY9183176.1"
                     /translation="NLWRPECHVIMIGFQAEGTLGRRLVDGADHVRLWGETIKVAAKV
                     HTVGGLSAHADQAGLLAWYGGFKQRPPVCLVHGEPGAQQALAAALRSAYRTDVRIPTR
                     GETMALAPAVAGTARR"
     gene            complement(354..728)
                     /locus_tag="VIQ99_08260"
     CDS             complement(354..728)
                     /locus_tag="VIQ99_08260"
                     /inference="COORDINATES: protein motif:HMM:NF042799.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6763 family protein"
                     /protein_id="HEY9183177.1"
                     /translation="MSHELDPKVGRWYRRVDDEQLFKVVDIDEDDGLIEIKTADGDVE
                     ELDSSEWVELDLEMAEAPEDYVDPDEESDDEIDEDEEEKDEERPKRGRTSRTPRDDWD
                     DDEDDDEWDDEDDGDDDYDSDR"
     gene            848..1198
                     /locus_tag="VIQ99_08265"
     CDS             848..1198
                     /locus_tag="VIQ99_08265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011478057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY9183178.1"
                     /translation="MEATHMALADNQCVPCRGGVPPLPRERIDALLKELEAGWRLTST
                     GHLIRDYEFRDFAAALEFANRVGDIAEREGHHPDLHVAWGRCGVEIWTHKIDGLTESD
                     FYLAAKADRAFRGR"
     gene            1271..>2257
                     /locus_tag="VIQ99_08270"
     CDS             1271..>2257
                     /locus_tag="VIQ99_08270"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY9183179.1"
                     /translation="MRPTIHRCALAVPVIGLGATHLAAAQAPAQTPATPPMAIEEIVV
                     VAQKREQLIQDVGIAVTAFSGRNLRERDIDQSEDLYQLIPNVNLQNNGGGGAPVVIVR
                     GVGLQSFRINDSPTTAFYVDDVYQTSVASAEWTMFDLERVEVLKGPQGGLYGRNALGG
                     AIQIISRTPTVDDDNNGYVSLGYQEYSREQLEAAASFAIGDKFAIRVAGRAVDGSDAP
                     YRSVTGGYDYGAEDRDAARVTLRISPTDTFDITLRVQGGNDGSELEPLRPVGVYLPIG
                     PAPTRPTVSAALLGGLAGLIPNPLCASIMTGGGSDPSTCATGTGVTPAGYGVT"
BASE COUNT          366 a          733 c          758 g          400 t
ORIGIN      
        1 aatctctggc ggccggagtg tcacgtgatc atgatcggct tccaagccga aggaacgctc
       61 gggcggcgac tcgtcgacgg cgcggaccac gtgcgactgt ggggcgagac gatcaaggtc
      121 gcggcgaagg tccacaccgt gggtggcttg tcggcgcacg cggaccaggc ggggttgctc
      181 gcctggtatg gagggttcaa gcagcggccg cccgtgtgcc tcgtgcacgg cgagccgggc
      241 gcgcagcaag cgctggctgc cgcattgcgt tcggcctacc ggaccgacgt gcgaataccg
      301 acgcgcggcg aaacgatggc gcttgctccg gccgtggccg gcacggcgcg gcgctagcgg
      361 tccgagtcgt agtcgtcgtc gccatcgtcc tcatcgtccc actcgtcgtc atcctcgtca
      421 tcgtcccagt catcgcgggg agtgcgactc gtgcgaccgc gcttcgggcg ttcctcgtcc
      481 ttttcttcct cgtcctcgtc gatctcgtcg tcgctctcct cgtcgggatc gacgtagtcc
      541 tcgggcgcct cggccatctc gaggtcgagc tcgacccact cgctcgaatc gagctcctcg
      601 acgtcgccgt cggcggtttt gatctcgatg agcccgtcgt cctcgtcgat gtcgacgacc
      661 ttgaacagct gctcgtcatc gacgcggcga taccatcgac cgactttggg gtcgagctcg
      721 tgactcatgg gcttgaagct ccgaaacgat ttgcggacat gctgggcgcg actatacctt
      781 ttgacgcagc gcctcggcac tcccctcgcg tagcggccgc caccgtagca tcattggcgt
      841 ccgagacatg gaggcgacac acatggcgct ggccgataac caatgcgtac cgtgccgagg
      901 cggcgtgccg ccgctgccgc gagaacgtat cgatgcgctg ctgaaggagc tcgaggcggg
      961 ctggaggttg acctctaccg gccacctgat acgggactat gagtttcggg atttcgctgc
     1021 cgcgctcgag ttcgcgaatc gcgtaggcga catcgccgag cgcgaggggc accatccgga
     1081 cctgcacgtg gcgtggggac gctgcggagt cgagatctgg acgcacaaga tcgacggtct
     1141 cacggaatcg gatttctacc tggccgccaa ggctgatcgc gcatttcgcg gccggtagct
     1201 cggggcatat acggcgaccg gctgggtcac taacatgagc caggaatatc cgagccaagg
     1261 aggaacgagc atgcggccga caattcatcg ttgtgcgctc gccgtgcccg tgatcggtct
     1321 cggtgccacc cacctcgcgg cggcacaagc gccagcccag actccggcga ctccgccgat
     1381 ggccatcgag gagatcgtcg tcgtcgcgca gaagcgcgag cagctgatcc aagacgtcgg
     1441 catcgccgtt acggctttct cgggccggaa tctgcgggaa cgcgacatcg atcaatccga
     1501 ggacctgtat cagctgatcc cgaacgtgaa cttgcagaat aacggtggcg gcggcgcccc
     1561 cgtcgtgatc gtccgcggcg tcggcctgca aagtttcagg atcaacgatt cgccgacgac
     1621 ggcgttctac gtcgacgacg tgtatcaaac atccgtggcc tctgccgaat ggacgatgtt
     1681 cgatctcgag cgcgtcgagg tgctgaaggg accgcagggc ggcctgtacg gacgcaacgc
     1741 gctcggtggt gcgattcaaa tcatctcgcg tacgccgacc gtcgacgacg acaacaacgg
     1801 ctacgtctcg ctgggctacc aggagtactc gcgcgagcag ctcgaggcgg ccgcaagctt
     1861 cgccatcggc gacaagttcg cgatacgcgt cgcggggcgc gcggtcgacg gtagcgatgc
     1921 gccgtatcgc agcgtcacgg gcggctacga ctacggcgcc gaggatcgcg acgcggcacg
     1981 agtcacgctg cggatctcgc cgaccgacac gttcgacatc acgctgcgcg tgcagggcgg
     2041 caacgacggt tcggagctcg agccgctgcg gccggtcggg gtctaccttc cgatcgggcc
     2101 cgcgccgacg cggccgactg tttctgcggc tctgctgggc ggcttggcgg ggctgatccc
     2161 gaacccgctt tgcgcgtcga tcatgaccgg tggcggctcg gatccttcga cctgcgcgac
     2221 cgggaccggt gtgacgccgg ccggctacgg cgtgacg
//
LOCUS       DATCUD010000565         1522 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62025, whole genome shotgun sequence.
ACCESSION   DATCUD010000565 DATCUD010000000
VERSION     DATCUD010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62025"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1054)
                     /locus_tag="VIQ99_08275"
     CDS             complement(<1..1054)
                     /locus_tag="VIQ99_08275"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEY9183180.1"
                     /translation="MVAILHAVGDIGPDRDDPRECFTLARTTLREADLGFCQLEVNLT
                     TRGVRMPQARHTGRAVAASAAAMRDAGFDVVSFAGNHCMDWGPDGLFDTMGNLRAAGL
                     DVVGVGADIAAARAPVVREVNGVRIAFVAYSSILPEGYWATDVRAGCAPMRAYTHYEQ
                     IELDQPGTPPRVHTWAHRGDLEAMRQDIALAKARADVVVASLHWGIHFVPGVLAQYQR
                     EVAYAAIDAGADLILGHHAHILKGIEIHRGKAIFYSLGNFAIDLRMTPAHAASQGFRE
                     IQALSPEWVPNFASLYNFPPDSRMTGVLRAELASTGVTELVFLPAFINDDAQPEVLRS
                     SDPRFTKVRDYLQWCCD"
     gene            complement(1060..>1522)
                     /locus_tag="VIQ99_08280"
     CDS             complement(1060..>1522)
                     /locus_tag="VIQ99_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013836312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY9183181.1"
                     /translation="LVGSIAVHLSRDLALQDELRRQPQLIPAAVEEFLRLYTPYRGFA
                     RTAVCDVEFGGRKIPAGEPIALVYASANRDEAVFPEGGTFRLHRPNLGDHLAFGRGPH
                     NCPGASLGRLELRVSLEELLARTTRFELNGEIVPTRFPEIGALSVPLRLES"
BASE COUNT          283 a          517 c          484 g          238 t
ORIGIN      
        1 tgtcgcagca ccactgcaag tagtcacgaa ccttcgtgaa acgtggatcg ctgctgcgca
       61 gcacttccgg ctgcgcgtcg tcgttgatga acgccggcag gaacacgagc tccgttacgc
      121 cggtgctcgc gagctcggcg cgcaacacgc ccgtcatccg cgaatcgggc ggaaagttgt
      181 acaggctcgc gaaattcggc acccactcgg gcgatagcgc ctgtatctcg cgaaacccct
      241 ggctcgcggc gtgcgccggt gtcatccgca ggtcgatcgc gaaattcccg aggctgtaga
      301 agatcgcctt gcctcgatgg atctcgatgc ctttaaggat gtgcgcatga tgcccaagaa
      361 tcagatcggc accggcgtcg atcgcagcgt atgcgacttc tctctgatac tgcgccaaga
      421 cacccggcac gaagtggatt ccccagtgga gtgacgcaac gacgacgtct gcacgggctt
      481 tcgcgagggc gatgtcttgc ctcatggcct cgagatcgcc gcggtgcgcc caggtatgca
      541 cgcgcggtgg cgtgcccggt tgatcgagct cgatctgctc gtaatgggta taggcccgca
      601 tcggcgcaca gcccgcacgc acgtccgtgg cccaataacc ctccggcaag atcgacgagt
      661 acgcaacgaa ggcaatccgc acgccgttga cctcgcgaac gaccggcgcg cgcgcagcgg
      721 cgatgtcggc gcccacgccc acgacatcga ggccggcggc gcgtaggttg cccatcgtgt
      781 cgaacaagcc atcggggccc caatccatgc agtggttgcc ggcgaacgag acgacgtcga
      841 aaccggcatc tcgcatcgcc gccgcagagg ccgcaaccgc ccgtcccgtg tgccgcgctt
      901 gcggcatccg cacgccgcgt gtcgtgaggt tgacctcgag ctggcaaaaa ccgaggtccg
      961 cctcgcgcag cgtcgtgcgc gccagagtga agcactctcg cggatcgtcc cgatcgggcc
     1021 cgatatcccc caccgcgtgc aggatcgcga ccaattgcgt cagctctcga gacgcagcgg
     1081 cacggacaat gcgccgatct cggggaagcg cgtgggcacg atctcgccat tgagctcgaa
     1141 gcgcgtcgtg cgcgccaaca gctcctcgag gctcacgcgc aactccaatc gccccaacga
     1201 ggcgccgggg cagttgtgtg gccctcggcc gaacgcgagg tgatcgccga gattcggccg
     1261 gtgcagacga aacgtcccgc cctccgggaa cacggcttcg tcccgattcg cagaggcgta
     1321 gacgagtgcg atgggctccc ccgcaggaat cttgcgcccg ccgaattcca cgtcgcagac
     1381 ggcagtccgg gcgaaaccgc ggtacggcgt atagaggcgc aggaactcct cgacagccgc
     1441 cgggatcaac tgcggctgcc gccgcagctc gtcctgtaaa gccagatcac ggctgagatg
     1501 cacggcgatg ctgccgacga gc
//
LOCUS       DATCUD010000566         4409 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76744, whole genome shotgun sequence.
ACCESSION   DATCUD010000566 DATCUD010000000
VERSION     DATCUD010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4409
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76744"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(132..590)
                     /locus_tag="VIQ99_08285"
     CDS             complement(132..590)
                     /locus_tag="VIQ99_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019868041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY9183182.1"
                     /translation="MKRLTGFCAAALTVVTLAVPALSTGDIDRSAVDFVAPEDIKFVR
                     NQAGTNEQAVLFGDPSKPGPYVIQLRWFPGNMSRPHFHSTDRFFVVLEGTWWLGTGTK
                     YDPDSTVPVKAGTYVFHKAGGIHYDGAKDEPALIQVWGTGPMTTTQAEAQ"
     gene            751..2067
                     /locus_tag="VIQ99_08290"
     CDS             751..2067
                     /locus_tag="VIQ99_08290"
                     /inference="COORDINATES: protein motif:HMM:NF044972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HEY9183183.1"
                     /translation="MEELFSPQRFLALWNTVSDWVSTNVLVFDNAAQLVLVAAALAIA
                     ALLTRRLRAPLDKLRARPALSRGAQLLAPLLFWTVLLGVLWLAISAAIAMNRPYGLVS
                     TTATLVAAWIAIHLASQLVKNPIWAKLFAWVAWSIAALSILGMLDPAIALLDSLAIRV
                     GQIDISLYDVVKSTLALAVLLSIALHVAGMIEARIRTASTLSPTVQVLLTKSLKIVLG
                     TVAVLIAIRSVGIDLTALAVVGGALGIGLGFGLQRTVSNLVSGVVLLIDKSIKPGDII
                     AVSGTYGWVTTLGGRYVSVRTRDGIEHLIPNETLITERVENWTHTQSRTRLKLDVGVH
                     YDSDLRQVIALCEQAARETERVLADPEPKCLFLEFGDSALKLQLRFWIADAQNGVQNV
                     KSAVLLRIWDKFKEQKITVPYPQRDVHVRSTEGAPRSHRDQAPRFA"
     gene            complement(2046..2756)
                     /locus_tag="VIQ99_08295"
     CDS             complement(2046..2756)
                     /locus_tag="VIQ99_08295"
                     /inference="COORDINATES: protein motif:HMM:NF016377.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9183184.1"
                     /translation="MPIPRIVHQLWKNEEIPARWKDAVASVKRYHKGWEYRLWTDDRL
                     DAYVREHHPKFYPKFAAFNRHIMRVDVFRYILMHDIGGLYCDLDYEFVRPFDYGDAEL
                     VLSLEYDEAYGDDVNQVANYILASAKGHPFWRDVLDDLDRHPPGPVKSPEVCLVTGPW
                     YLTTQFYKKRYEGVRLTPKPVLSPRRVHGRYERKFYVNSGITHGFHYGWGSWRDRLTW
                     AHVKQKLRKWRRYAKRGA"
     gene            complement(2771..>4409)
                     /locus_tag="VIQ99_08300"
     CDS             complement(2771..>4409)
                     /locus_tag="VIQ99_08300"
                     /inference="COORDINATES: protein motif:HMM:NF017050.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEY9183185.1"
                     /translation="PLTAAGLSVVGLEAGTRLSPRDFAPDELRNNFRGWPHAAQKANR
                     EVPVHRPNAAAPDNPRAAIHPMMNGVGGTTLHYWAQSWRLNPWDFKVVSETTRRYGAA
                     RIPKGSTVEDWPFDLTELEPYYDRVERALGVSGQAGNVRGTIDPRGNIFEGARAEAYP
                     MPALRGTEFTELMGGAARRLGWHPFPGPAAINSEQHDGRSACLYHGFCNRGGCHVSAK
                     NSTAVTTIPRAERTGNLDVVTEAQVVRIDVDDEGRRVAGVQYLKGGEMYVQPARVVLL
                     AGYTYENVRLLLLSTSAKYPRGLANNRGQVGRHYFTHNQSAGVLALFPRNLNRWYGLP
                     AQGVAIDDWADDNFDHGALDFIGGGNLWVYSDRQPIAAAGTVTFGRAPRWGSEWKSFI
                     RENADRTVNSYLQKTTLPYDVNYLDLHPTVKDPLGDPVIRITADHQDNEKRIAVFIQD
                     KMEQWFKEAGAIASLRQGQGTMGVSTHAYGGTRMGDNPETNVVDRWGFCHEVPNLGVL
                     GASVMGTSGARNPTLTAQALAWRTAERLVASWATIAG"
BASE COUNT          700 a         1508 c         1434 g          767 t
ORIGIN      
        1 cccggcccgg acgccgttcg acgccaacac gacgagcgtc tgagcggccg cgggcccgcc
       61 acacgcgatc acggcagcga gcgcgatcgc gcagcgccgg gcgccgccgc tcgcacggct
      121 gacgcggtgc gtcattgcgc ctcggcctgc gtggtcgtca tcgggcccgt gccccatacc
      181 tggatcagcg cgggctcgtc cttggcgccg tcgtaatgga tgccgccggc cttgtggaac
      241 acgtacgtgc cagccttcac gggcaccgtg ctgtcggggt cgtacttcgt gccggtgccg
      301 agccaccagg tcccctcgag cacgacgaag aaccggtcgg tcgagtggaa atgcggccgg
      361 ctcatgttgc ccgggaacca gcgcagttga ataacgtagg ggcccggctt ggacgggtcg
      421 ccgaacagca cggcctgctc gttcgtgccc gcctggttgc gcacgaactt gatgtcctcc
      481 ggcgcgacga agtcgaccgc gctgcgatcg atgtcgccgg tagagagcgc ggggacggcg
      541 agcgtcacga cggtgagggc ggcagcgcag aatccggtga gacgtttcat ggtgcgtcct
      601 tcttgtggcg caggccgggc ctgcggatga ctgatggtag gccgaaatgc cgccgtgcgc
      661 gagcagcgcc gcaacgagcc ccgacgccgc gcacgcaacc gcgcgcgcct ggcatagact
      721 cataccacgt cccattgaag gagccgaccg atggaggagc tattctcccc gcagcgtttc
      781 ctggcgttgt ggaataccgt gtccgactgg gtgtcgacga acgtcctggt cttcgacaac
      841 gccgctcagc tcgtgctggt ggcggccgcg ctcgcgatcg ccgcgctgtt gacgcgccgc
      901 ttgcgagcgc cgctcgacaa gctccgcgca cgcccggctt tgagtcgagg cgcccagctg
      961 ctggctccgt tgttattctg gaccgtgctg ctcggggtgc tatggctcgc gatctcggca
     1021 gccatcgcga tgaaccggcc gtacgggctc gtcagcacca cggcgaccct ggtcgcggcc
     1081 tggatcgcga tccacctcgc atcgcagctc gtcaagaatc cgatctgggc caagctgttc
     1141 gcgtgggtcg cgtggtcgat cgcggcgctc agcatactcg gcatgctcga tcccgcgatc
     1201 gccctgctcg actccctggc gatcagggtc gggcagatcg acatttcgct gtacgacgtc
     1261 gtgaagtcca cgcttgcgct cgcggtgctg ctgtcgatcg cgctgcacgt ggccgggatg
     1321 atcgaagcgc ggatccgtac cgccagcacc ctctccccga cggtccaagt gctgctgacg
     1381 aaatcgctga agatcgtgtt gggcacggtc gccgtgctga tcgcgattcg cagcgtcggc
     1441 atcgatctca ccgcgctcgc ggtcgtcggc ggcgcgctcg gcatcggact cggcttcggc
     1501 ctgcaaagaa ccgtcagcaa cctggtcagc ggcgtggtgc tgctcatcga caagtcgatc
     1561 aagcccggcg acatcatcgc ggtgtccggc acctacgggt gggtgacgac gctcggcggc
     1621 cgctacgtct ccgtgcgcac gcgcgacggc atcgagcatc tgatcccgaa cgagacgctg
     1681 atcaccgagc gcgtggaaaa ctggacgcac acgcagagcc gcacgcgcct gaagctcgac
     1741 gtcggcgtgc actacgactc tgacttgcgc caggtgatcg cgctctgcga gcaggccgcg
     1801 cgcgagaccg agcgcgtgct cgcggatccg gagccgaagt gcttatttct cgagttcggc
     1861 gacagcgcgc tgaagctcca gctgcgcttt tggatcgcgg acgctcagaa cggcgtgcag
     1921 aacgtcaaga gcgccgtgct actcagaatc tgggacaaat tcaaggagca gaagatcacc
     1981 gtgccgtatc cgcaacgcga cgtgcacgtg cgctcgacgg aaggcgcgcc gcgctcacac
     2041 cgcgatcaag ccccgcgctt cgcatagcgc cgccacttgc ggagcttttg cttcacgtgc
     2101 gcccaggtca gccggtcgcg ccacgagccc cagccgtagt ggaagccgtg cgtgatgccg
     2161 ctgttcacgt agaacttccg ctcgtatcgc ccgtgcacgc gccgcgggct caacacgggc
     2221 ttcggcgtca ggcgcacacc ttcgtaccgt ttcttgtaga actgtgtcgt tagataccac
     2281 ggccccgtca cgaggcagac ctccggcgac ttcacgggcc cgggcggatg ccggtcgaga
     2341 tcgtccagca cgtcgcgcca aaacgggtga cccttggccg acgccaagat gtaattcgcg
     2401 acctgattca cgtcatcgcc gtacgcttcg tcgtactcga gcgaaagcac gagctccgcg
     2461 tcgccgtagt cgaacggccg cacgaactcg tagtcgagat cgcaatagag gccgccgatg
     2521 tcgtgcatca ggatgtagcg gaacacgtcg acgcgcatga tgtggcggtt gaacgccgcg
     2581 aacttcgggt agaacttggg atgatgctcg cggacgtacg catccagcct gtcgtcggtc
     2641 cagagccggt actcccagcc cttgtgatac cgcttcacgg acgcgaccgc gtccttccac
     2701 cgagccggga tttcctcgtt cttccacaat tgatggacga tgcgcgggat cggcatggcc
     2761 taagtatccg tcagccagcg atcgtcgccc agctcgcgac caaccgctcc gcggtgcgcc
     2821 acgcgagcgc ctgtgccgtc agcgtcgggt tccgcgcgcc gctcgtgccc atcacggacg
     2881 cgccgagcac acccaagttc ggcacctcgt ggcagaagcc ccaccggtcg acgacattcg
     2941 tctcggggtt gtcgcccatg cgcgtgccgc cgtacgcgtg cgtcgatacg cccatcgtgc
     3001 cttggccttg acgcagagac gcaatcgcgc ccgcctcctt gaaccactgc tccatcttgt
     3061 cctggatgaa cacggcgatc cgcttctcgt tgtcctggtg gtcggccgtg atcctgatga
     3121 ccggatcgcc gagcgggtcc ttcacggtcg gatgcaggtc caggtagttc acgtcgtacg
     3181 gcagcgtggt cttttgcagg tacgagttca cggtgcgatc cgcgttctcg cggatgaacg
     3241 atttccactc cgagccccag cgcggcgcgc ggccgaacgt gaccgtgccc gcggccgcga
     3301 tcggctggcg atccgagtac acccacaggt tgccgccgcc gatgaaatcg agcgcaccgt
     3361 gatcgaagtt gtcgtcggcc cagtcgtcga tcgcgacgcc ctgtgccggc agcccgtacc
     3421 agcgattcag attccgcgga aacaacgcga gcacgccggc cgattggttg tgcgtgaagt
     3481 agtgccggcc gacctggccg cggttgttcg cgaggccgcg cggatacttc gctgacgtcg
     3541 acaataataa gaggcgcacg ttctcgtacg tgtagcccgc gagcagcacg accctagccg
     3601 gctggacgta catctccccg cctttcaaat attgcacgcc ggctacgcgg cggccttcgt
     3661 cgtcgacgtc gatccgcacg acctgcgctt cggtcacgac gtcgaggttg cccgtgcgct
     3721 ctgcgcgcgg gatcgtcgtg acggccgtcg aattcttcgc ggagacgtgg caaccgccgc
     3781 ggttgcagaa accgtgatac aggcacgcgc tgcggccgtc gtgctgctcg gagttgatcg
     3841 cggccgggcc cggaaacgga tgccaaccga gccggcgcgc cgcaccgccc atcagctccg
     3901 tgaattccgt gccgcgcaac gccggcatcg ggtacgcctc tgcgcgagcg ccctcgaaga
     3961 tgttgccgcg cggatcgatc gtgccgcgca cgttgccggc ctgccccgac acgccgagtg
     4021 cgcgctcgac cctgtcgtag tacggctcga gctccgtaag atcgaacggc cagtcctcga
     4081 ccgtggagcc cttcgggatc cgcgccgcac cgtagcgacg cgtcgtctcg ctgacgacct
     4141 tgaagtccca cggattcagg cgccagctct gcgcccagta gtgcagcgtc gtgccaccga
     4201 cgccgttcat catcggatgg atcgccgccc gcggattgtc cggtgccgcg gcgttcggcc
     4261 ggtgcacggg cacctcgcga ttggccttct gcgccgcatg cggccagccg cggaagttgt
     4321 ttctgagctc gtcgggcgcg aagtcgcgcg gcgagagtcg cgtgccggcc tcgaggccga
     4381 cgacgctcaa gccggccgcc gtcagcggc
//
LOCUS       DATCUD010000567         3237 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34018, whole genome shotgun sequence.
ACCESSION   DATCUD010000567 DATCUD010000000
VERSION     DATCUD010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3237
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34018"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(144..578)
                     /locus_tag="VIQ99_08305"
     CDS             complement(144..578)
                     /locus_tag="VIQ99_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183186.1"
                     /translation="MRKQRHEAQLACTLTDAFTALLDVVGKGRWSGSALEVGPVLPQP
                     GRQYAQQRGKVLRRGRVLACLRPVSITLKETLLDPPCCVSLRLHWRIEPKDEGACVLL
                     DASYSLNGAATLRRRHWSERIQGHCSRMLGALERRVAEAEET"
     gene            complement(665..1636)
                     /locus_tag="VIQ99_08310"
     CDS             complement(665..1636)
                     /locus_tag="VIQ99_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016344855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEY9183187.1"
                     /translation="MVHAVEFDAFGGPEVLRYRKIELGAPGAGEARVAHRAIGLNFID
                     VYHRTGLYPLTLPSRLGGEGAGVVTAVGSGVTHVRVGDRVAYTAPAPLGSYADERIVA
                     ARWLVKLPAAIDDQTGAAMMLKGLTAWYLLKRSYRVQAGDWIVLYAAAGGVGLIAAQW
                     ARELGVRVIGIVGSEAKRELAQWAGCEHVLLDGDAIPQRVREISGGGVPVVYDSVGRN
                     TFFQSLDCLRPHGFLVSFGNSSGKVDPFGLSELTKRGSLYVTRPTLYDFIREPSELEA
                     ASTDLFDLVVHGRVKIDVRQTYALKDAANAHRDLEARRTTGSTVLIP"
     gene            1702..2919
                     /locus_tag="VIQ99_08315"
     CDS             1702..2919
                     /locus_tag="VIQ99_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9183188.1"
                     /translation="MAEHLVVVGGGQAAAQAVQTLRAQNFLGPITLVCDEPHPPYQRP
                     PLSKKYLAGELTRERLYLRPASFYAEKGVTLEQNRRAEELDLAARKVRLDDGRSLKYD
                     RLLLTTGSRVRRLSVPGAELSGVHYLRTIADVDAITAELTPGARAVLVGAGYIGLEVA
                     AVLSTRGFDVTVLESLDRVLSRAVSPEVAAFYSERHRAAGVAIQCGAQVAAFRGTTHV
                     TSVETTAGQMFPCDIAIIGIGIVPNVEIAGVAGLPCDNGIIVDEFARTADANVVAAGD
                     CTNHPHPKLGRRVRLESVPNAIHQAKVAAATLLGAPVAYSEVPWFWSDQYDLKLQIVG
                     LSMGYDEVVLRGEPATRSFAAFYLAHGELLAVDAVNSPREFAAAKKLVATGARIAPEM
                     LRDPNVDLAALAG"
     gene            complement(2922..>3237)
                     /locus_tag="VIQ99_08320"
     CDS             complement(2922..>3237)
                     /locus_tag="VIQ99_08320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183189.1"
                     /translation="LPGQGTLFVRADTNAWRFLKEALVPVWFLDRPWNGPAEYWPTVG
                     PGSDDNGVVVGVSGDFRGSEGSVVERYELTALDPEREAALAEGELRLNLTLSGPQVAV
                     KP"
BASE COUNT          540 a         1128 c         1055 g          514 t
ORIGIN      
        1 ggctggcaac gtgatgaact cgatccgtga gcgcgcgcac tcgcctctcc ttggattccg
       61 gcgaggcgct gccgcacaag acggcagagc gtgccgcttg ggatcgagta tagaacgccg
      121 tgcaccgtaa tctgcaaccc cgttcacgtt tcttcggctt cggcaacgcg ccgctcgagc
      181 gcacccagca tgcgagagca gtgcccctga atgcgctcgg accaatgccg gcgccgcaac
      241 gtcgcagcgc cgttcaacga gtagctggca tcgagcagca cgcaggcgcc ctcgtccttc
      301 ggctcgatcc gccaatgcag gcgcaagctg acacagcagg gcgggtcgag cagcgtttcc
      361 ttcaacgtga tcgataccgg ccgcaggcac gccagcaccc tgccgcggcg caataccttg
      421 ccgcgctgct gcgcgtactg acggccaggc tgcggcagga ctgggccgac ctcgagcgcg
      481 ctgccgctcc atcgtccctt gccgacgacg tcgagtagcg ccgtgaacgc atccgtcaac
      541 gtgcaggcaa gttgtgcttc gtggcgttgc ttgcgcacgc gtcctccatg gcgactggcg
      601 tgcgacgacg ataagcggcc gcgcgcggcg acgcgacgcg cgaatctcgc gagtgcgaat
      661 agatttacgg gatcagcacg gtcgagccgg tcgtgcgccg cgcctcgagg tcgcgatgcg
      721 cgttcgccgc gtctttgagc gcgtacgtct ggcgcacgtc gatcttgacg cggccgtgca
      781 cgacgaggtc gaagaggtcc gtcgaggcag cctcgagctc gctcggctcg cgaatgaaat
      841 cgtagagagt cggccgcgtc acgtacaacg agccgcgctt cgtgagctcg gagagcccga
      901 acggatcgac ctttcccgac gagttgccga aactcacgag gaaaccgtgc ggacgcaggc
      961 aatcgagcga ctggaagaac gtgttgcggc cgaccgagtc gtagacgacc ggcacgccgc
     1021 cgcccgaaat ctcgcgcacg cgctgcggga tcgcgtcccc gtcgagcagg acgtgctcgc
     1081 aaccagccca ctgcgcgagc tcgcgcttcg cctccgagcc cacgataccg atcacgcgca
     1141 cgccgagctc gcgcgcccac tgcgcggcga tcaaccccac gccgccggcc gccgcgtaca
     1201 gcacgatcca atccccggct tggactcggt agctgcgctt caagagatac caggccgtga
     1261 gccccttcag catcatcgcc gcgcccgtct ggtcgtcgat cgcggcaggc agcttcacga
     1321 gccaacgcgc ggcgacgatc cgctcgtcgg catacgagcc cagcggcgcc ggggccgtgt
     1381 acgcaacccg atcccctacg cgaacgtgcg tgacgccgga accgaccgca gtcacgacgc
     1441 cggcgccttc gcctccgagc cggctcggca acgtcagtgg atacagcccc gtgcggtgat
     1501 agacgtcgat gaagttcagg ccgatcgcac gatgcgctac gcgcgcctcg ccggcgcctg
     1561 gcgcaccgag ctcgatcttg cgataacgaa gcacctcggg acccccgaac gcgtcgaact
     1621 cgactgcatg caccatggcg tctgaagctc tctgcctgcg gctgttagaa tccccggccc
     1681 gtttccagga tatagcattc gatggccgag catctcgtcg tcgtcggcgg tggccaagca
     1741 gccgcacaag ccgtgcaaac actgcgggcg cagaattttt tgggaccgat cacgctcgtc
     1801 tgtgacgagc ctcacccgcc gtatcagcgg ccgccgctgt cgaagaagta cctcgccggc
     1861 gagctcacgc gcgagcgatt gtatctgcgg cccgcgtcgt tctacgcgga gaaaggcgtg
     1921 acactcgagc agaatcggcg cgccgaggag ctcgacctcg cggcgcgcaa agtacgcctc
     1981 gacgacggca ggtcgctcaa gtacgaccgc ctgctgctca cgaccggcag tcgtgtgcgt
     2041 cgtctctcgg ttccaggcgc ggagctgtcc ggcgtgcatt acttgcgcac gatcgccgac
     2101 gtcgatgcga tcacggccga gctgacgccc ggcgcgcgag ccgtgctcgt cggtgcgggc
     2161 tacatcgggc tcgaggtcgc ggccgtgctt tcgacgcgcg gcttcgacgt cacggtcctc
     2221 gaatcgctgg accgcgtgct gtcgcgcgcc gtcagcccgg aagtcgcggc gttctattcc
     2281 gagcgtcatc gcgccgccgg cgtcgcgatc cagtgcggcg cgcaggtcgc ggcgttccgg
     2341 ggcacgacgc acgtgacgag cgtcgagacg accgcaggtc agatgttccc ttgcgacatc
     2401 gcgatcatcg gcatcggaat cgtgccgaac gtggagatcg cgggtgtggc cggcctaccg
     2461 tgcgacaacg gcatcatcgt cgacgagttc gcgcgcacgg cggacgccaa cgtcgtcgcc
     2521 gccggcgact gcacgaatca cccacatccg aagctcggcc ggcgcgtacg actcgaatcc
     2581 gtcccgaatg cgattcacca agccaaggtc gcggctgcaa cgctgctcgg ggcgccggtc
     2641 gcgtactccg aggtaccgtg gttctggtcc gatcaatacg acctcaagct gcagatcgtc
     2701 gggctgtcga tgggctacga cgaagtcgtg ctgcggggcg agcctgccac gcgaagcttc
     2761 gcggcgttct atctcgcgca cggcgagctg ttggccgtgg atgcggtgaa cagtccgcgc
     2821 gagttcgctg cggccaagaa gctcgttgcg accggtgcgc ggatcgcgcc cgaaatgctg
     2881 cgcgatccga acgtggatct cgctgcgctg gccggctgag cctacggctt gaccgcgact
     2941 tgggggccgc tcagggtgag gttcagccgc agctcgccct ccgcgagcgc cgcctcgcgt
     3001 tcgggatcga gtgccgtgag ctcgtaacgc tcgaccacgc tgccctcgct gccgcggaag
     3061 tcaccggaga ctcccacgac gacgccgttg tcatcgctgc cggggccgac ggtcggccaa
     3121 tactcggccg gcccgttcca cggcctgtcc aagaaccaga ccggcacgag cgcttccttc
     3181 aagaaccgcc atgcattcgt gtcggcgcgc acgaacagcg tgccttgccc ggggagc
//
LOCUS       DATCUD010000568         2198 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_69670, whole genome shotgun sequence.
ACCESSION   DATCUD010000568 DATCUD010000000
VERSION     DATCUD010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69670"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..488
                     /locus_tag="VIQ99_08325"
     CDS             <1..488
                     /locus_tag="VIQ99_08325"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024578.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEY9183190.1"
                     /translation="TSPPHESWSGAALVDRDGKLCGLGSLVIQGFEINGATTTVNMFV
                     PIELLTPIVDELCMHGRRLAPPRPWLGMLVHDDQNDLTVVGVYRNCPADKAGLKPGDV
                     IVGIDDEPVTGLANMFRRVWSLGSAGVDVPLDVLRNAEKMQLRVRSGDRAGFQRKGTL
                     Q"
     gene            complement(549..1031)
                     /locus_tag="VIQ99_08330"
     CDS             complement(549..1031)
                     /locus_tag="VIQ99_08330"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9183191.1"
                     /translation="MKKICTLLGASVVPFLLISCGGGAPQATIPETPEGAAFQFRSNL
                     MNVLAYKVAQARGMAQGEIPVDEAAFKKHASDVVVLSGMIVEGFIPNSAIEGSAALPE
                     VWTNMADFQAKAADLQNAAQALADSANQNGFEAAKGMVQAVGQTCGGCHRPYRRRQEE
                     "
     gene            complement(1115..1525)
                     /locus_tag="VIQ99_08335"
     CDS             complement(1115..1525)
                     /locus_tag="VIQ99_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005991704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183192.1"
                     /translation="MTSTEDLKQRIEAIETGYEFMLAYAAQGRETDKGAAAGRNVREY
                     LDKMVLALDGLSEAIAACADALDPNLAKAGAAFFAAVDADARVALAAIRLVLARADVS
                     SQLIDNLNASIHLRALLTDLFVVDEALKPPRSRT"
     gene            complement(1522..>2198)
                     /locus_tag="VIQ99_08340"
     CDS             complement(1522..>2198)
                     /locus_tag="VIQ99_08340"
                     /inference="COORDINATES: protein motif:HMM:NF013460.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY9183193.1"
                     /translation="VTTSRGADTGGNTAAGPTSVVIRHALPDRLFHWLSAACVLTLLG
                     TAFLPILGVEFGWVTVHWIAGLVLTVLVVFHIIRVLVRRTLGAMWVGGADVRDGLAII
                     GATLRHQTLDLRTGKYSVAQKLIHHAFAVVVLTTVVTGGLMLLRIDTPWWQRNPYVLP
                     DATWGIVYVLHGLAALMLITMVMMHVYFALRPEKLSFTRAMIRGWITRAEFDEHHDPK
                     RWQVDR"
BASE COUNT          399 a          743 c          691 g          365 t
ORIGIN      
        1 tcacgtcgcc gcctcacgag agctggtccg gcgctgcact cgtcgaccgt gacggcaagc
       61 tctgcggctt gggctcgctc gtgattcagg gtttcgagat caacggcgcg acgactacgg
      121 tgaacatgtt cgtgccgatc gaattattga ccccgatcgt cgacgagctc tgcatgcacg
      181 gtcggcgcct ggcgccgccg cgcccgtggc tcggcatgct cgtgcacgac gaccagaacg
      241 acctcacggt cgttggcgtc tatcgcaatt gccccgccga caaggcggga ctgaagcccg
      301 gcgacgtgat cgtcggcatc gacgacgagc ccgtgaccgg cctcgcgaac atgttccgtc
      361 gcgtgtggag tctcggcagc gccggcgtcg acgtgccact cgacgtgctc cgcaacgccg
      421 aaaagatgca gctgcgcgtg cgctccgggg atcgcgcggg ctttcagcgc aagggcacgc
      481 ttcagtagcc ccagaagcaa acggcggccg aaaggccgcc gtccgcgatg aaccgtcgac
      541 cctcgggcct actcttcctg ccggcgacgg taggggcgat ggcaaccgcc gcacgtctgg
      601 ccgacggctt ggaccatacc cttcgcggcc tcgaagccgt tctggttggc ggagtccgcc
      661 agcgcttgcg cggcgttttg caggtcggcg gccttcgctt ggaagtccgc catgttcgtc
      721 cagacctcgg gcagcgccgc gctgccctcg atagcgctgt tcgggatgaa cccctcgacg
      781 atcatgccgg agagcaccac gacatcgctc gcgtgcttct tgaacgcggc ctcatcgacg
      841 ggaatttcgc cctgcgccat gccgcgtgcc tgcgcgacct tgtacgcaag cacgttcatg
      901 aggttcgagc gaaactggaa tgccgcgccc tcgggcgttt cgggaatcgt agcctgcgga
      961 gcaccgccgc cgcaggagat caacagaaac ggaacgaccg aggcaccgag caacgtacag
     1021 atttttttca tgactgaacc cttgatggtt tgcggcgcag gaccctcggg gcagcataaa
     1081 caaatcgctc gcgcggtcgc aagcccaacg accgtcaggt ccggctcctc ggcggcttca
     1141 aggcctcgtc gacgacgaac agatccgtga gcagagcgcg taaatgaatc gacgcgttca
     1201 gattgtcgat cagctgcgag ctcacgtccg cgcgcgcgag cacgagccga atcgccgcga
     1261 gcgcgacgcg tgcatcggcg tcgacggccg cgaagaatgc tgcgccggcc ttcgcgagat
     1321 tcgggtcgag cgcgtccgca cacgcggcga tcgcctcgct caatccatcg agcgcgagca
     1381 ccatcttgtc gagatactcg cggacgttgc gtcccgcggc cgccccctta tccgtctcgc
     1441 gtccctgcgc cgcatacgcg agcatgaact catagccggt ttcgatggcc tcgatgcgtt
     1501 gcttcaaatc ttcggtgctc gtcatcggtc cacctgccag cgcttcggat cgtgatgctc
     1561 gtcgaactcc gcacgcgtga tccaaccgcg gatcatcgct cgcgtgaacg atagcttctc
     1621 gggccgcaac gcgaagtaca cgtgcatcat caccatcgtg atcagcatga gcgctgcgag
     1681 cccgtgcagc acgtacacga taccccacgt cgcatcgggc aatacatacg gattccgttg
     1741 ccaccacgga gtatcgatgc gcagcagcat gaggccgccg gtcacgaccg tcgtgagcac
     1801 gaccaccgcg aacgcgtgat ggatcagctt ctgcgcgacc gaatacttgc cggtgcggag
     1861 atcgagcgtt tggtgccgca gcgtcgcgcc gatgatcgcg agaccatcgc gaacgtcggc
     1921 gccgccgacc cacatcgcac cgagcgtgcg ccgcacgagg actcggatga tgtggaacac
     1981 gacgagcacc gtcagcacga gccccgcgat ccaatgcacc gtgacccaac cgaactcgac
     2041 gcccagaatc ggcaggaaag ccgtgccgag cagcgtcagc acgcacgcgg ccgagagcca
     2101 gtgaaacagc cggtcgggaa gcgcgtgccg gatgacgacg ctggtcgggc cggcggccgt
     2161 atttccgccg gtgtcggcgc ctctggacgt ggtcacga
//
LOCUS       DATCUD010000569         3441 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_12528, whole genome shotgun sequence.
ACCESSION   DATCUD010000569 DATCUD010000000
VERSION     DATCUD010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3441)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3441)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3441
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12528"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VIQ99_08345"
     CDS             <1..245
                     /locus_tag="VIQ99_08345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183194.1"
                     /translation="AYFYLDVKDESGATQSWSFQTYALITLKRAGTDRQLFIDNIGKE
                     VFVRGCLAKNGREHYAAAGTMRFSDGELRQVGQLQN"
     gene            262..1101
                     /locus_tag="VIQ99_08350"
     CDS             262..1101
                     /locus_tag="VIQ99_08350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183195.1"
                     /translation="MNFRRITLTAVLTFGLIVGAQQHGTAQPAQGQKYTITVMPPGGP
                     APRLANGRPDLSGHWLPNSAGQGVSGRYGVDPAAMRQFDPQLTPEEPPSFQPWAIERI
                     RSMTPTELELSKSSVNCMPRGVPAIWLQNPYSTMLVHTPTMLVQLYEVLNNFRVIHTD
                     GRALPEYPEPLFHGNSAARWEGDTLVVESVGFDERTYIMPNGWFHSDELRVTEHYTRP
                     SMNYLIVEITVEDPKVLNKPWKSAPRRWTLGDGEIYEFYCTNNRELEELEKLRELELG
                     QQR"
     gene            1128..1886
                     /locus_tag="VIQ99_08355"
     CDS             1128..1886
                     /locus_tag="VIQ99_08355"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183196.1"
                     /translation="MTGDRPHQIKGRVVSASIERRVDLTPEHFKIWLRPAEPFTFEPG
                     QYCTVGVTNVERPYSIASSPREPLIELFVELIPPPEGHLTPLLHALKVGDTVTLRPRA
                     KGVFVLHPEFRNHVMVSTVTGVAPFVSMLRHWREGPADDKRMYVLEGVSYIDEFGYDE
                     ELRDIAARDPRVRFVPTCSRPNDPRNAGWRGEVGRVHTIVERYVTEWGLAPSETCIYA
                     CGHPQMIRDLHARYEATGFAFEEERFWKPADSGT"
     gene            complement(1889..>3441)
                     /locus_tag="VIQ99_08360"
     CDS             complement(1889..>3441)
                     /locus_tag="VIQ99_08360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183197.1"
                     /translation="WLRPLGATEAQPIAGTEGARYPFWSADGRVVGYSVLGGIYRVEI
                     AGGAPQRLVPVSFVTGAAFNAEGGLLFSRGTSGSLMYLATPGGTPTPATRVTDGQAGH
                     RFPQFLPDGRRFLFYAAGEPQKSGVFLGSLDGGEPTRLVAADSAGVFAAPHWVLFVQQ
                     ESLLARRLDLSRSELAGDPLVVASQVGTEATGHAGVSASDVGHIALRDAVSQRSQLVW
                     RDRAGTPIGIVAEGATNDFVFPELSPDGRYVATQHAVEGTWDIWSLDLVRGGSSAVTR
                     GSGNEQLPVWSPDGERIVASSNQLGVNNLYVRNARAVGSAGEPVVENANTKQPQSWSN
                     DGRRLLYYEIGPTTGRDLWWFDFDTKETRVFANTAFEERSGQISPDGRWVAYETNESG
                     RYEVVVRSFPEPTTTWPVSTDGGTQPRWSPDGTELFFVAPDLSLMAASITAHASDDRI
                     LDVGVPVSLFAARPTGNVLADIVRAQYAVARDRFLMNESVEGSADVPVTLVLNWRAAR
                     EASTANQP"
BASE COUNT          637 a         1134 c         1090 g          580 t
ORIGIN      
        1 acgcctactt ctatctcgat gtgaaggacg agagcggtgc gacgcaatcg tggtcgtttc
       61 agacgtacgc cctgatcacg ttgaagcggg ccggcaccga ccgccagctg ttcatcgaca
      121 acatcggcaa ggaagtcttc gtgcgcggtt gcctcgcgaa gaacgggcgc gagcattacg
      181 ccgccgctgg aacgatgcgt ttctccgacg gtgagctccg tcaggtcggt cagctccaga
      241 actgagccga cgcaacgaca catgaacttt cgccggataa ctctgactgc cgtgctcacg
      301 ttcgggctga tcgtaggcgc gcagcagcac ggcacggcgc aaccagcgca gggccagaaa
      361 tacacgatca ccgtgatgcc gcccggcggc cccgcgccgc ggctcgcgaa cggccgtccg
      421 gatctctcgg ggcattggct gccgaacagc gcagggcagg gcgtaagcgg gcgctacggc
      481 gtcgacccgg ccgcgatgcg gcagttcgat ccgcagctca cgccggaaga gccgccgtcg
      541 tttcaaccgt gggcgatcga gcggattcgc tcgatgacgc ccaccgagct cgagctgtcg
      601 aagtcctcgg tcaactgcat gccgcgcggc gtgccggcga tttggctcca gaatccgtac
      661 tcaacgatgc tcgtgcacac gccgaccatg ctcgtgcagc tgtacgaagt gctgaacaac
      721 tttcgcgtga ttcacacgga cggtcgcgcg ctgccggagt atccggagcc gctgttccac
      781 ggcaacagcg ccgcgcggtg ggaaggcgac acgctcgtcg tcgaatccgt cggtttcgac
      841 gaacgcacct acatcatgcc gaacggctgg ttccacagcg acgagctgcg cgtgaccgag
      901 cactacacgc gtccgtcgat gaactatttg atcgtcgaga tcacggtcga ggatccgaag
      961 gtgctcaaca aaccgtggaa gtccgcgcca cgacgctgga cgctcggcga tggcgagatc
     1021 tacgagttct actgcacgaa caaccgcgag ctcgaggagc tcgaaaagct ccgcgagcta
     1081 gagctcgggc agcagcggta accgcacgtg aacgccgcga gaatctcatg accggcgatc
     1141 ggccgcacca gatcaagggc agagtcgtaa gcgcgtcgat cgagcggcgc gtggatctga
     1201 cgcccgagca tttcaagatc tggctgcgtc cggccgagcc gttcacgttc gagcctgggc
     1261 agtactgcac ggtcggcgtc acgaatgtcg aacggccata ctcgatcgcg tcgtcgccgc
     1321 gtgagcctct gatcgagctg ttcgtcgagc tgattccgcc gcccgaaggg catctcacgc
     1381 cgttgttgca cgcgctgaaa gtcggcgaca cggtcacgtt gcggccgcgc gcgaaaggcg
     1441 tgttcgtgct gcaccccgag ttccgcaatc acgtgatggt gtcgacggtg accggcgtgg
     1501 cgcccttcgt gagcatgctg cgccattggc gtgagggccc ggccgatgac aagcgcatgt
     1561 acgtgctcga gggtgtcagc tatatcgacg agttcggcta cgacgaggag ctgcgcgaca
     1621 tcgcggcccg tgatccgcgc gttcgtttcg tgccgacgtg ctcgcggccg aacgatccac
     1681 gtaatgccgg gtggcgcggc gaggtcggcc gtgtgcatac gatcgtggag cgctacgtga
     1741 ccgaatgggg gctcgcgccg agcgagacct gcatctacgc gtgcggccac ccgcagatga
     1801 tcagggacct gcacgcgcgc tacgaagcca cgggcttcgc gttcgaggaa gagcgctttt
     1861 ggaaacccgc ggacagcggc acctgaacct aaggttggtt cgccgttgac gcctcacgtg
     1921 ccgcacgcca gttcagaacc agcgtaaccg ggacgtcggc ggatccttcg acactctcgt
     1981 tcatcaggaa tctgtcgcgc gcgaccgcgt attgcgctcg cacgatgtca gccaagacgt
     2041 tgccggtagg ccgagcggcg aacaatgaaa ctggcactcc gacgtcgagg atccgatcat
     2101 cgctcgcgtg cgccgtaatg gatgctgcca tcagactcag gtccggcgcg acgaaaaaga
     2161 gttccgtgcc gtctgggctc cagcgcggct gcgtgccgcc atcggtcgac acgggccacg
     2221 tcgtcgtcgg ctccgggaac gatcgcacca cgacttcata tcgaccggat tcgttggtct
     2281 catacgccac ccagcgccca tccggtgaga tttggccgga tctctcctcg aacgcagtgt
     2341 ttgcgaagac gcgtgtctct ttggtgtcga aatcgaacca ccacaggtca cgccctgtcg
     2401 tcggaccgat ctcgtagtaa agcaagcgcc gaccgtcgtt cgaccaactc tgtggctgtt
     2461 tggtgttggc gttctctacg acgggctcgc ccgcactgcc gacagcgcgt gcgtttcgca
     2521 cgtacaggtt gttgacgccg agctggttcg acgaggccac gattcgctcc ccgtccggtg
     2581 accacacggg cagctgctcg ttgcccgagc cccttgtgac cgcgctcgag ccgccgcgca
     2641 ccaggtccag tgaccagata tcccacgtgc cctccaccgc gtgctgcgtg gcgacgtagc
     2701 gcccgtccgg cgacagctcc ggaaagacga aatcgttcgt cgctccctcc gcgacaatcc
     2761 cgataggcgt tccggcgcga tcgcgccaca cgagctgcga gcgctgactg acggcgtcgc
     2821 ggagagctat gtggccgacg tcagacgccg agactccggc atgaccggtt gcttcggtgc
     2881 cgacctgcga cgcaaccacg agcgggtcac cggcaagctc gctacgcgac aggtccaatc
     2941 ggcgagcaag cagagactct tgttgcacga acaggaccca gtgcggcgcg gcgaataccc
     3001 cggcggagtc tgctgccacc agccgggtcg gttcgccgcc gtccagtgac ccgagaaaca
     3061 ctcccgactt ctggggctcg ccggctgcat agaacagaaa ccgacggccg tcgggcaaga
     3121 actgcgggaa tcgatgcccg gcctggccat ccgtcacccg agtcgccggt gtgggcgtcc
     3181 ctcccggcgt cgcgaggtac atcaatgacc ccgaggtccc gcgggagaac aacaatcccc
     3241 cttcggcatt gaacgcggca ccggtgacga aggaaaccgg cacgagcctt tgaggagcgc
     3301 cacccgcgat ttcgacgcgg tagataccgc ccagtacgct gtaaccgacc actcggccgt
     3361 ccgctgacca gaacgggtac cttgcgccct cagtccccgc gatcggttgc gcttccgttg
     3421 caccgagcgg acgcaaccac a
//
LOCUS       DATCUD010000570         1861 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41101, whole genome shotgun sequence.
ACCESSION   DATCUD010000570 DATCUD010000000
VERSION     DATCUD010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1861)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41101"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..203)
                     /locus_tag="VIQ99_08365"
     CDS             complement(<1..203)
                     /locus_tag="VIQ99_08365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HEY9183198.1"
                     /translation="MLYIREFVVRKHERGLLFKNGDFVRFLAPAVYRFFDPGKRIEVE
                     RFDLSQPKFEHRLLDYLVRWHPEA"
     gene            698..1111
                     /locus_tag="VIQ99_08370"
     CDS             698..1111
                     /locus_tag="VIQ99_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017462314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY9183199.1"
                     /translation="MAAITIGRLAKQAGVNIDTIRYYERHGLLPEPARRVSGYREYTA
                     ADLDRLRFVRRAKELGFTLDEIGELLSLTAARGNDMRGVKRKAEQRLEHVEHKIKELQ
                     RMRRGLKSLIAACPGHGELGHCPIVAALSGGQDHE"
     gene            1104..>1861
                     /locus_tag="VIQ99_08375"
     CDS             1104..>1861
                     /locus_tag="VIQ99_08375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011646706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HEY9183200.1"
                     /translation="MSDAAHHEHHHDHSEHRGHHMHASGGVEQKHGHASCCAQPAAPA
                     AAATKAIAGTIWTCPMHPEIRRDAPGACPICGMALEPLTPSADEGENAELADMTRRFI
                     VATVLSVPLLWPMLGEMFDAIDPMRILGHGVMAWSELLLATPVVLWAGWPFLVRGWQS
                     VVNRNLNMFSLIALGTLAAWSFSVVATVMPQVLPPSFASASGGLPLYFEAAAVIVTLV
                     LLGQVLELRARAQTSGAIRALLRLAPKIAHRLDAA"
BASE COUNT          328 a          595 c          618 g          320 t
ORIGIN      
        1 gcctcggggt gccagcgaac gaggtaatcg agcaggcgat gctcgaactt cggctgtgac
       61 agatcgaagc gctcgacctc gatgcgcttg ccgggatcga agaagcgata aaccgcgggc
      121 gccaagaagc gcacgaagtc accgttcttg aacaacagtc ctcgctcgtg cttccgcacg
      181 acaaactcgc ggatgtacaa cacggccgtt ctcctcacca aactcgactt ggcgccgcgg
      241 gcagcacacc gctatccgtg aaggacgcgg gtgtcgcatt gggggggtag cgcacgcgca
      301 gggtgtgctg cccgcaacca agtcgtccac gttgctcggg gcgaaaaaaa gccccggtgg
      361 agcgtccaac cggggctttt tgcacccttg tcggaaggct cctttcgacg ccttccgacc
      421 caagttcgga aaacgtcagc taatgaagta gcgcgtatta cggcgattcg actcgagcgc
      481 aaaggcgccc gaaaacgtcg gttgccatgg gctaatgcaa agcgttaggc ctgcggcgcc
      541 ggcgtgtggt gcgaattgtc gtacgtgcga tttcatgagg gcgcgcaatc tacgcctctg
      601 cgcgccgcga gtcaacgcgt gcacgcacga atcccttgac tctggactag actccagggt
      661 ttaggctggg cgcctgggaa attggaggta acgcgcaatg gctgccatca cgatcggtcg
      721 cctggccaaa caggccggcg tcaacatcga cacgatccgt tattacgagc gccacggcct
      781 attgccggag ccggcgcggc gtgtgtcggg ctatagggaa tacacggccg ccgacctcga
      841 ccggttacgg ttcgtccgcc gtgccaagga gctcggcttc actctcgacg agatcggtga
      901 gcttctgtcg ttgacggccg cgcgcggcaa cgacatgcgc ggcgtcaagc gcaaagccga
      961 gcagcgactc gagcacgtcg agcacaagat caaggagctg caacggatgc gtcgagggtt
     1021 gaagtccctg atcgccgcgt gccccggaca cggcgagctc ggtcattgcc cgatcgtcgc
     1081 ggcgctgagc ggaggtcaag accatgagtg acgccgcgca ccacgagcac catcacgatc
     1141 acagcgagca tcgcggtcac cacatgcacg cgagtggcgg cgtggagcag aagcatggac
     1201 acgcgagctg ctgtgcgcaa cccgccgcgc ctgccgcggc cgcgacaaag gcgattgccg
     1261 gcacgatctg gacgtgtccg atgcaccccg agattcgccg cgatgccccc ggcgcctgcc
     1321 cgatctgcgg catggcgctc gagccgttga ccccgagcgc cgacgaaggt gagaacgcgg
     1381 agctcgccga catgactcgg cgcttcatcg ttgcgacggt gctcagcgtg ccgttgctct
     1441 ggccgatgct gggcgagatg ttcgacgcga tcgatccgat gcggatcctc ggccacggcg
     1501 tgatggcgtg gagcgagctc ctgctcgcga cgccggtcgt gctgtgggct ggctggccgt
     1561 tcctcgtgcg cggctggcaa tcggtcgtga atcgcaactt gaacatgttc tcgctgatcg
     1621 cgcttggcac gctcgcggcc tggtcgttct ccgtggtcgc cacggtcatg ccgcaggtgc
     1681 tgccgccgtc gttcgcgagc gcgagcggtg ggttgccgct gtatttcgag gccgccgccg
     1741 tgatcgtcac gctcgtgctg ctgggccagg tcctcgagct gcgcgcacgc gcccagacgt
     1801 ccggtgcgat ccgcgcgctg ctacggctcg cgccgaagat cgcgcatcgc ctcgatgcgg
     1861 c
//
LOCUS       DATCUD010000571         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48181, whole genome shotgun sequence.
ACCESSION   DATCUD010000571 DATCUD010000000
VERSION     DATCUD010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48181"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..593
                     /locus_tag="VIQ99_08380"
     CDS             <1..593
                     /locus_tag="VIQ99_08380"
                     /inference="COORDINATES: protein motif:HMM:NF025100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HEY9183201.1"
                     /translation="PASHRRRMSALAKMAVQVALEATSDAGADYLVFCSQHGELPRTR
                     ELLATIVNGGELSPMSFSQSVHNTSAGLYTIIKGIQVPTTSLAAGAGTFAYGWIEAET
                     YLRSYPGRRALLVSYDEVLPSEYRVYSRQEQRSYALALLLAAAGSGGIAVELTSAEVE
                     ERLPMAPLFAAWALSQEPELTMTAGGQGFAWRRLGT"
     gene            583..1386
                     /locus_tag="VIQ99_08385"
     CDS             583..1386
                     /locus_tag="VIQ99_08385"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY9183202.1"
                     /translation="MGRSWRFVATLVSFAAFGACALVMGALYFGALLVLMPPGPSRQR
                     LARGGVQWGFRAFLHFMSLVGVVKLDIDRLGLARLGASGRCVIVANHPTLLDAMVLLA
                     YVEGAGCVVKHGLWRNPFLSPAIRASNYIPSRDSEQLLRDCAAALGRNEPLIVFPEAT
                     RSVPGEPLKLQRGAATIALDSDVVLEIVHFSCEPVFLSKTQAWYLIPDRRPCLAARVG
                     ASVRARDFQGDGLNRNVAARRLTEALQRELAREIPSDARAGAGAETTAH"
     gene            1346..1609
                     /locus_tag="VIQ99_08390"
     CDS             1346..1609
                     /locus_tag="VIQ99_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017028624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEY9183203.1"
                     /translation="MRELEQELKQLLIDVLNLEDVSADQIDSEAPLFGEGLGLDSIDA
                     LELGVAIRKKYDVQMDPDSEATRRHFASIANLARFIGSGNGGR"
     gene            1596..1859
                     /locus_tag="VIQ99_08395"
     CDS             1596..1859
                     /locus_tag="VIQ99_08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002537544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY9183204.1"
                     /translation="MAAVSALSREQIFAELKRELCELFDLDPAQVTLEARLNDDLDLD
                     SIDAVDLAVRLQDLTNKRIRPEQFKAVRTVKDVVDAVEDMLRA"
     gene            1903..2499
                     /locus_tag="VIQ99_08400"
     CDS             1903..2499
                     /locus_tag="VIQ99_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014398642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183205.1"
                     /translation="MPIVVSRAVAASLSAVLVGALVLYPLLVYVGIGRFGVGPIAAVL
                     AFVCLLRLLVLRSRGGPQPFTLGLMIVCVGGMVLAGVSFVLESEEAMLYYPVLMNAGL
                     LAVFAASLISPPSIVERLARLKDPDLLPHAVAYTRRVTIAWTVFFTINGGIALYTAAW
                     SPLATWALYNGFIAYFLIAAMFGVELAIRAIVMRKHAR"
BASE COUNT          393 a          808 c          884 g          511 t
ORIGIN      
        1 ttcccgcttc gcaccgccgc cgcatgagtg cgctcgcgaa gatggccgtt caggttgccc
       61 tcgaggcaac gagcgacgcg ggcgccgact acctggtgtt ctgctctcag catggggaac
      121 tgccgcgtac gcgcgagctg ctcgccacaa tcgtgaacgg cggcgagctg tcgccgatga
      181 gcttcagtca atcggtccac aacacgagcg ccggcctgta cacgatcatc aagggaattc
      241 aggtgcccac gacgtcgttg gcggctggcg ccggtacgtt cgcctacgga tggatcgagg
      301 ccgagacgta cttgcggagc tacccgggca ggcgtgcgtt gctcgtgagt tacgacgagg
      361 tgttgccgag cgagtatcgg gtctatagtc gccaggaaca gcgttcgtat gcgttggcgt
      421 tattgctcgc ggctgccggc agtggtggca ttgcggtcga gctcacttct gcggaagtgg
      481 aggaacgtct gccgatggcc ccattgttcg cggcttgggc gctctcccag gagcctgagc
      541 ttacgatgac ggccgggggg caaggctttg catggaggcg tcttgggacg tagttggcgt
      601 ttcgttgcga cgctcgtgtc gtttgccgca ttcggtgcct gtgcgctcgt catgggcgcg
      661 ctgtactttg gtgcgctgct cgtgctgatg ccgcccggac cctcgcgcca acgcctcgcg
      721 cgcggcggcg ttcagtgggg ctttcgggct ttcttacact tcatgtcgct cgtcggagtc
      781 gtgaagctcg acatcgatcg attgggtctg gcgcgcctcg gtgcgagcgg ccgctgcgtg
      841 atcgtggcca accatccgac gctgctcgac gcgatggtcc tgctcgccta cgtcgagggg
      901 gctggctgcg tcgtgaagca tggcttgtgg cgtaatccgt tcctgtctcc ggccattcgc
      961 gcatcgaact acattccgag cagggattcg gagcagttgc tgcgcgattg cgccgcggcg
     1021 ctcgggcgca acgagccgtt gatcgtgttc cccgaggcca cgcgctccgt gccgggggag
     1081 ccgctgaagc tccagcgggg ggcagcgacg atagcgctcg actcggacgt cgtgctcgag
     1141 atcgtgcact tcagctgcga gcccgtgttt ctgtcgaaga cccaagcctg gtacctaatt
     1201 ccggaccggc gaccttgcct tgccgcgaga gtgggtgcta gcgtacgcgc gcgcgatttc
     1261 cagggggacg gcttgaaccg gaacgtcgcc gcgcgacgcc tcacggaggc gctgcaacga
     1321 gagctggcga gggagatccc gtcggatgcg agagctggag caggagctga aacaactgct
     1381 cattgacgtg ctgaacctcg aagacgtcag cgcggaccaa atcgacagcg aggcgccgct
     1441 gttcggcgaa ggcctgggtc tcgactccat cgacgcgctc gagctcggcg tcgccatccg
     1501 caagaagtac gacgtgcaaa tggaccctga ctccgaggcg acacgccggc atttcgcctc
     1561 gatcgcgaac ctcgcgcgtt tcatcggcag tggcaatggc ggccgttagc gctttatcgc
     1621 gcgagcagat cttcgcggag ctcaagcgcg agctctgtga gctgttcgat ctcgaccccg
     1681 cgcaggtcac gctcgaggcg cgcttgaacg acgatctgga tctcgacagc atcgatgcgg
     1741 tcgatcttgc cgtgcgcctc caggatctga ccaacaaacg catcaggccc gagcaattca
     1801 aggccgtccg caccgtcaaa gacgtcgtag atgccgtcga agacatgctg cgcgcgtagg
     1861 ccaaacgagc gccggagccc ggtgctcggg caacgctagg cgatgccgat cgtcgtgtcg
     1921 cgcgcggtcg ccgcatcgct ctccgccgtg ctcgtcggcg ccctggtgct gtacccgctg
     1981 ctcgtgtacg tcggaatcgg ccgattcggc gtcggtccga tcgcggccgt gctggccttc
     2041 gtgtgcttgt tgcggttgct cgtgctgcgc tcgagaggcg gcccgcagcc cttcacgctg
     2101 gggctgatga tcgtctgcgt gggcggcatg gtcctcgccg gcgtaagctt cgtgctcgaa
     2161 agcgaggagg ccatgctgta ctacccggtg ctcatgaacg ccgggctgct cgccgtgttc
     2221 gcggcgagtc tcatatcgcc gccgagcatc gtcgagcggc tcgcgcgcct gaaggacccc
     2281 gatttgctgc cacacgccgt cgcgtatacg cggcgcgtca cgatcgcgtg gacggtgttc
     2341 ttcacgatca acggcggcat tgcgctctac accgcggcat ggagcccgct cgcgacgtgg
     2401 gcgttgtaca acgggttcat tgcgtatttc ctgatcgcgg cgatgttcgg tgtcgagctc
     2461 gcgatccgag cgatcgtgat gcggaagcac gctcgatgag cgcgagtcgc ttgaccgcac
     2521 ggctcggcgg gctctaggac cgcattgtcg cattcgaccg cgatggtgcg ctgcggcggt
     2581 tgggcgatct cacggc
//
LOCUS       DATCUD010000572         1802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_104827, whole genome shotgun sequence.
ACCESSION   DATCUD010000572 DATCUD010000000
VERSION     DATCUD010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_104827"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1586)
                     /gene="dnaE"
                     /locus_tag="VIQ99_08405"
     CDS             complement(<1..1586)
                     /gene="dnaE"
                     /locus_tag="VIQ99_08405"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013033609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEY9183206.1"
                     /translation="MLSFVHLRVHTEYSLVDSLLRVDALVDAVAEQRMPACAITDQGN
                     VSALVKFYKPALGRGVKPIIGADLWVAESREDREPSRLTLLCQGRTGFKRLSALLTKS
                     ARQGPVAGRSVLLKDWLEPGALEGLIGLSGGQHGEVGRALVAGRGARGGEVLDQWQKL
                     MPGRFYVELQRLGRAGEREYVARAVEAAAAHSVPVVATNDVCFLKRDDFEAHETRVCI
                     ARGVTLDDPARARTYTEEQYLRSPAEMAALFADLPEAIENTVEIAKRCSLEVDLGRVF
                     LPDFVADDETPPREYLERRAKSGLDQRLSELKVSAEAEPRYRERLAREIDVISKMGFE
                     GYFLIVADFIAWARANSIPVGPGRGSGVGSLVAYALGITNLDPLAHDLLFERFLNPER
                     VSLPDFDIDFCIDGRDRVIDYVGERYGRERVAQIATYGTMAARAVVRDVGRALGLPYG
                     YVDKIAKLIPFEIGITLDKAIADDEELRSVYEKDEEVRGLVDLAKRLEGLARNVGTHA
                     GGVVIAPQPITEYMPLYADA"
     gene            complement(1580..>1802)
                     /gene="rnhB"
                     /locus_tag="VIQ99_08410"
     CDS             complement(1580..>1802)
                     /gene="rnhB"
                     /locus_tag="VIQ99_08410"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012347855.1"
                     /note="RNH2; RNase HII; binds manganese; endonuclease
                     which specifically degrades the RNA of RNA-DNA hybrids;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEY9183207.1"
                     /translation="LVPVISAASILAKVCRDRLMRRLHRRYPQYGFDENKGYATAAHL
                     RALEQFGPCAIHRTTFAPVRELGAERAQC"
BASE COUNT          302 a          626 c          592 g          282 t
ORIGIN      
        1 tcggcatcgg cgtacagcgg catgtattcg gtgatcggct gcggcgcgat cacgacaccg
       61 cccgcgtgcg taccgacgtt gcgcgcgagc ccttcgagac gcttcgcgag atcgacgagc
      121 ccgcgaacct cctcgtcctt ctcgtatacg ctgcgcagct cctcgtcgtc ggctatcgcc
      181 ttgtcgagcg tgatgccgat ctcgaacggg atcagcttcg cgatcttgtc gacgtagccg
      241 tagggcaacc cgagcgcgcg ccccacgtcg cggacgacgg cgcgcgcggc catcgtgccg
      301 taggtcgcga tctgcgcgac gcgctcgcgc ccatagcgct cgccgacgta atcgatcaca
      361 cgatcgcggc cgtcgatgca gaagtcgatg tcgaagtccg gcagcgacac gcgttccgga
      421 ttcaggaacc gctcgaacaa gagatcgtga gccaacggat cgaggttcgt gatgccgagc
      481 gcgtacgcga cgagcgagcc gacgcccgag ccgcgccccg ggcccacggg aatcgagtta
      541 gcgcgagccc aggcaatgaa gtccgcgacg atcaagaagt agccttcgaa gcccatcttc
      601 gagatcacgt cgatctcgcg cgcgagccgt tcgcgataac gtggctcggc ttcggccgag
      661 accttgagct ccgacaggcg ctgatcgaga ccgctcttgg cgcgccgttc cagatattcg
      721 cgcggcggcg tctcgtcgtc ggcgacgaag tcgggcaaga agacacgtcc gaggtcgacc
      781 tcgagcgaac accgtttcgc gatctcgacg gtgttctcta tcgcctcggg cagatccgcg
      841 aacaacgcgg ccatctccgc cggagagcgc aggtactgct cttcggtata ggtgcgcgcc
      901 cgcgccgggt cgtcgagcgt gacgccccgt gcgatgcaga cgcgcgtttc gtgcgcctcg
      961 aagtcgtcgc gtttcaggaa gcagacgtcg ttggtcgcca cgaccggcac ggaatgcgcg
     1021 gccgcggcct ccaccgcacg cgcaacgtac tcgcgttcgc cggcgcggcc gagccgctgc
     1081 agctcgacgt agaaccgtcc cggcatcagc ttctgccact ggtccagcac ctcgccgccg
     1141 cgcgcgccgc gcccggcgac caacgcgcgg ccgacttcgc catgctggcc gcccgacaga
     1201 ccgatcagcc cctcgagcgc gccgggctcg agccaatcct ttaacagcac gctgcggccg
     1261 gccacgggac cttggcgcgc actcttcgtg agcagcgcgc tcaagcgttt gaaccccgtt
     1321 cgcccttggc agagcagcgt caggcgcgag ggctcgcggt cctcgcgtga ctcggcgacc
     1381 cagaggtcgg cgccgatgat cggcttcacg ccgcggccga gcgccggctt gtagaacttc
     1441 acgagcgccg aaacgttgcc ttgatcggtg atcgcacagg ccggcatgcg ctgctcggcc
     1501 acggcatcga cgagcgcgtc gacgcgcagc aggctgtcga cgagcgaata ctctgtgtga
     1561 acccgcagat ggacgaagct caacattgcg cccgctccgc accgagctcg cgcacgggcg
     1621 caaacgtggt gcggtgaatc gcacagggcc cgaactgctc gagcgcgcgc aggtgggccg
     1681 ccgtcgcgta gcccttgttc tcgtcgaatc cgtactgtgg gtagcggcga tgcaggcggc
     1741 gcatgagccg gtcgcgacac accttggcca ggatcgaagc ggcgctgatc acgggcacga
     1801 ga
//
LOCUS       DATCUD010000573         2695 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55468, whole genome shotgun sequence.
ACCESSION   DATCUD010000573 DATCUD010000000
VERSION     DATCUD010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55468"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            217..1713
                     /locus_tag="VIQ99_08415"
     CDS             217..1713
                     /locus_tag="VIQ99_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007042271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEY9183208.1"
                     /translation="MKVLPDRLPRHVYAAAQVRELERLAIARGVTGDDLMSRAGAAAF
                     ALLRQRWPSAHTVAIVCGVGNNAGDGFVVARLAKAAGLAVDVLSVMPEARLAGEAGRA
                     AADCRAAGVAIDAFDVRALDGADVIVDALFGTGLSRPVAGDMRAAIEAINAARAPVLA
                     LDVPSGLDADTGWPNPVAVRADTTITFLGLKQGLFLGGAADYCGRVEFDGLEIPADLA
                     AGLAPLLTRLTFADLARALPRRPRSAHKGSCGRLLLVGGGPGMPGAIRLAAEAALRVG
                     AGLVYVATHRDNAGPVLSGRPEIICRAVGSAQDLEELISMVDGAVLGPGLGRSAWARG
                     LWRRVVDSELPLVVDADGLNWLAAEPFERGRWLLTPHAGEAARLLGSSTDEVQRDRCA
                     AAQALARRFGATVVLKGPNTLVATPHASDALCVCDRGNPGMATAGTGDVLAGTLGALY
                     VQTRDFDVAARAGVLLHALAGDAAAEAGERGTVAGDLLPHLREWANPV"
     gene            1695..2198
                     /gene="tsaE"
                     /locus_tag="VIQ99_08420"
     CDS             1695..2198
                     /gene="tsaE"
                     /locus_tag="VIQ99_08420"
                     /inference="COORDINATES: protein motif:HMM:NF014426.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEY9183209.1"
                     /translation="MGESCLARVVDTEAALAELAGFVARTWRQSGLHPLVVGLSGALG
                     SGKTTWVRAMLRGLGYRGRVPSPTYTLLEHYSCDGLTLVHLDLYRLGGDAELENLGLR
                     DWLGDPSSWILVEWPERALELARRCDLNIAFEEAGGGRRIVFEAVTQPGIEALTPVRH
                     GGSNKPP"
     gene            2283..>2695
                     /locus_tag="VIQ99_08425"
     CDS             2283..>2695
                     /locus_tag="VIQ99_08425"
                     /inference="COORDINATES: protein motif:HMM:NF023169.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HEY9183210.1"
                     /translation="MSRVGSRKSGLVAALLLSLASSATAATVQSVRAWSGPEGTRVVF
                     ELSGPVEHRVFALSGPDRVVIDLPGSVAASSLRLEEPKGALTAVRSGPRPGGELRLVL
                     ELTETARPKTFLLAPNEQYGHRLVVDLPPAETAPVV"
BASE COUNT          383 a          869 c          983 g          460 t
ORIGIN      
        1 ctccatgtaa gtcatcgtcc cgtggcgccc gcgctcgagc caacgctcga gatgctgctc
       61 gtcggcatcg agcttggtcg tggctatgcc gagcttcgta aagccgagct cgcgacccag
      121 ccgtttcacg tcggcagcca accgatcgag ttgtggagcg ctgaaatccg gcacgacgct
      181 caagcctcac gttgccgccc agtataatct tggctgatga aagtccttcc ggatcgactg
      241 ccgcggcacg tctatgccgc cgcgcaggtt cgcgagctcg agcgcttggc gatcgcgcgc
      301 ggcgtgaccg gcgacgacct gatgagcaga gccggcgcgg ccgcgttcgc gttgctcagg
      361 cagcgctggc ccagcgcgca taccgtggcg atcgtctgcg gtgtcggcaa caacgccggg
      421 gacgggttcg tcgtggcgcg cctcgcgaaa gcggcgggcc ttgccgtcga cgtgttgtcg
      481 gtcatgccgg aggcaaggct ggccggcgaa gcgggtagag ccgccgccga ttgccgtgcc
      541 gcgggcgtcg cgatcgatgc gttcgacgtg cgcgcgctcg atggcgccga cgtgatcgtc
      601 gacgctttgt tcggcaccgg gctctcgcgg ccggtagccg gcgacatgcg cgcggcgatc
      661 gaggcgatca acgcggctcg agcgccggtg cttgctctcg acgtgccgag cggcctggac
      721 gcggacaccg gctggccgaa tccggtggcc gtgcgcgccg acacgacgat cactttcctc
      781 gggctcaagc aggggttgtt cctcggcggc gccgcagact attgcggcag ggtcgaattc
      841 gacggcctcg agattccggc ggacttggct gcgggcttgg cgccgctact cacgcggctc
      901 acattcgcgg acctcgctcg cgcgctgccg cgccgcccgc gcagcgccca caagggttcg
      961 tgcggccgtc tgttgctcgt gggcggcggg cccggaatgc cgggcgcgat tcggctggcg
     1021 gcggaagccg cgctgcgcgt cggggccggg ctcgtctatg tcgcgacgca ccgggacaat
     1081 gccggcccgg tgctgtcggg gcgcccggaa atcatttgta gagcagtggg ttctgctcag
     1141 gatctcgagg aacttatcag catggtggac ggcgccgttc tcggcccggg ccttgggcgg
     1201 tcggcctggg cgcgcgggtt gtggcgacgc gtcgtggaca gcgagttgcc gctcgtggtc
     1261 gacgcggatg ggctcaactg gttggctgcg gagccgttcg agcgaggccg gtggctgctg
     1321 actccacacg cgggcgaggc cgcgcggctg ctcggcagct cgacggacga agtgcagcgc
     1381 gatcgctgtg ccgctgcgca ggcgctcgcg cgccgattcg gggcaacagt cgtgctgaag
     1441 gggccgaata ctctggtcgc gacgccgcac gcgtccgacg cgctatgcgt gtgcgatcgc
     1501 gggaatcccg gaatggcgac cgcgggcacg ggcgacgtgt tggccggaac gctcggcgcg
     1561 ttgtacgtcc agacgcgaga tttcgacgtt gcggcgcgcg ccggagtgtt gctgcacgcg
     1621 ctggcgggtg atgcggcagc cgaggccggc gagcgcggta ccgttgccgg cgatctgctg
     1681 ccgcacctgc gagaatgggc gaatcctgtc tagccagagt cgtcgatacc gaggcagcgc
     1741 tcgcggagct cgccggcttc gtcgcgcgca cgtggcgcca gagcggcttg cacccgctcg
     1801 tggtcgggct cagcggcgcg ctcggcagcg gcaagacgac ttgggtccga gccatgctgc
     1861 gcggactcgg ctatcggggc agggtgccgt caccgaccta tacgctgctc gagcactatt
     1921 cgtgcgatgg gctcacgctg gtgcacctcg atctctatcg tctcggcggc gacgcggagc
     1981 tcgagaactt gggtctccgc gactggctcg gtgatccgag cagctggatt ctggtcgagt
     2041 ggccggagcg tgccctggag ctcgcacgcc gctgcgatct caacatcgca ttcgaagaag
     2101 ccgggggagg ccgtcgcatc gtgttcgagg ctgtcacgca gcctggaatc gaggcgttaa
     2161 cgccggttcg tcatggagga tcgaataagc ccccgtaatt gcctgctgca caagaagaaa
     2221 acgttgaaaa cgccgagaaa aaccggtaaa cattagccgg tgggccaatc ggagtcggga
     2281 tagtgtcgcg cgtcggatcg cgtaaatcgg ggctggtcgc agcgctgctg ctctcgctcg
     2341 cgagctctgc gaccgccgcc accgtgcaga gcgtccgcgc gtggtccggc cctgaaggca
     2401 cgcgagtcgt gtttgagctc agcggccccg tcgagcatcg tgtgttcgcg ctgtcgggcc
     2461 ccgatcgcgt cgtgatcgat ttgccgggca gcgtggctgc gagctcgctg cgcctcgaag
     2521 agccgaaggg cgccctcacg gccgtgcgca gcggcccgcg ccccggcgga gagctgcgtt
     2581 tggttctcga gctcacggaa acggccagac ccaagacttt tctgctggcg ccgaacgagc
     2641 aatacggtca tcgcctcgtc gtggacctgc cgccggccga gaccgcgccc gtcgt
//
LOCUS       DATCUD010000574         1547 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48223, whole genome shotgun sequence.
ACCESSION   DATCUD010000574 DATCUD010000000
VERSION     DATCUD010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48223"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1015
                     /locus_tag="VIQ99_08430"
     CDS             <1..1015
                     /locus_tag="VIQ99_08430"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9183211.1"
                     /translation="TAPKLLTVVHDGISIPAVAQPSKQGFVYVFNRVTGAPLWPIEER
                     PVPQSDTPGEASSPTQPFPTAPPPFARQSFTEADINPYISEEDQAKVREVLRASRNEG
                     LYTPPSLQGTIMMPGHNGGANWGSSAVDPQNGRLFVVSKELPTTANLRVPQPAGAGAA
                     PPGGPPGGGNRPPPAPPPNAGPDFIPYTAPVDFMIQPSTGLSAIGPPWSQITAYDLNK
                     GTILWQVPDGDVASLAARGITGTGSHAPRGGVVATGGGLLFIGTSSDRKLRAYDADTG
                     AVLWSYDLPAATEGVPAVYSVNGRQYLAIAVGGNGLFSQGLDQPEPGPGQYMVFALGS
                     ANQ"
     gene            1043..1546
                     /locus_tag="VIQ99_08435"
     CDS             1043..1546
                     /locus_tag="VIQ99_08435"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9183212.1"
                     /translation="MRKVTTLALAASMLVASGTSLADDAAGAREADRAAIEALMWRYV
                     RALDTMDADGYAAVFTADGTFGSGNTQRKGRADLKAMVADLKKNRDERAAAGTPSPAM
                     YHVIANHQITFTGADSARYDSYWMTVFGAAGPETPVRVAAAGRGVDELVRVDGQWLIK
                     NRNVAPQ"
BASE COUNT          266 a          530 c          540 g          211 t
ORIGIN      
        1 gacggcgccg aagctgctga ccgtcgtgca cgacgggatc tcgattcccg cggtcgcgca
       61 gccgagcaag caaggcttcg tgtatgtctt caatcgcgtc acgggcgcgc cgctctggcc
      121 gatcgaggag cgtccggtgc cgcagagcga cactccggga gaagccagct cgccgacaca
      181 accgttcccg acggcgccgc cgccgttcgc gcgccagtcg ttcaccgagg ccgacatcaa
      241 tccgtacatc tccgaggagg accaggccaa ggttcgcgag gtcctgcgtg cgtcgcgcaa
      301 cgaaggcctg tacacgccgc cgagcttgca gggcacgatc atgatgccgg ggcacaatgg
      361 cggcgcgaat tggggcagct cggccgtgga tccacagaac ggccgcctgt tcgtcgtctc
      421 gaaggaattg ccgaccaccg cgaatctgcg cgtgccacaa ccggcgggcg cgggagccgc
      481 accgccgggc ggtccaccgg gcggcggcaa ccgcccgccg ccggcgccgc cgccgaacgc
      541 cggcccggac ttcataccgt acacggcgcc cgtcgacttc atgatccagc cgagcacggg
      601 gctgtcggcg atcggcccgc cgtggtcgca gatcacggcc tacgacctga acaagggcac
      661 gatcctgtgg caagtgccgg acggcgacgt cgcgagcctc gcggcacgag gcatcaccgg
      721 cacgggcagt catgcgccgc gtggcggcgt agtggccacc ggcggcggct tgctgttcat
      781 cggcacgtcg tcggaccgca agctgcgcgc ctacgacgcc gacaccggcg ccgtgctctg
      841 gagctacgat ctgcccgcgg cgacggaggg cgtgccggcc gtctattcgg tcaacggcag
      901 gcagtacctc gcgatcgcgg tcggcggcaa cgggctgttc agccaggggc tcgatcagcc
      961 cgagccgggc ccgggccagt acatggtgtt cgcgctcggc agcgcgaatc agtaactcac
     1021 gttcaacagg gggaaccaaa aaatgcgtaa ggtcacgact ctggctctcg cggcttcgat
     1081 gttggttgcg agcggtacgt cgctcgccga cgacgcggcc ggcgcacgcg aagcggatcg
     1141 cgccgcgatc gaggcgttga tgtggcgcta cgtgcgcgcg ctcgacacga tggatgcgga
     1201 cggctacgcg gccgtgttca cggcggacgg aacgttcggc agcggcaaca cgcagcgcaa
     1261 aggccgtgcc gacctcaagg cgatggtcgc cgacctcaag aaaaaccgcg acgagcgcgc
     1321 cgccgccggc acaccgagcc cggccatgta tcacgtgatc gcgaatcatc agatcacgtt
     1381 cacgggcgcg gactcggcgc ggtacgactc gtactggatg accgtgttcg gcgcggcagg
     1441 acccgagaca ccggtccgtg ttgccgcagc cggacgcggg gtcgacgagc tcgtgcgcgt
     1501 cgacggccag tggctgatca agaaccggaa cgtcgcgccg cagtagc
//
LOCUS       DATCUD010000575         4950 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_12595, whole genome shotgun sequence.
ACCESSION   DATCUD010000575 DATCUD010000000
VERSION     DATCUD010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4950
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12595"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..564)
                     /locus_tag="VIQ99_08440"
     CDS             complement(<1..564)
                     /locus_tag="VIQ99_08440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006912333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEY9183213.1"
                     /translation="MTDQVGISGFAVYVPPYRVDLESWCRWTNNAWDKTRAVVGNSFR
                     MRGPAQSVYTMAATAVMRLIDRYDIDPSRVGFLGLGTESSTDNSAGAVIIKGMLDEGL
                     EASGRARLSRHCEVPEVKHACLGGVYALKHALRYLALDTEDRCAIVVAADIAEYARGS
                     SGEPTQGAGAVAMLLERNPKLLNVHLEH"
     gene            755..1075
                     /locus_tag="VIQ99_08445"
     CDS             755..1075
                     /locus_tag="VIQ99_08445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183214.1"
                     /translation="MKLWIRGNSLRLRVSKTDLAKIAETGMAEDTVRFSSEQSLRYAI
                     EVRPTGAITALFSGTEIVVTLPKPRLDLWLRPNEVSVEGSQPIGRGKVLQIVLEKDDG
                     APRG"
     gene            1131..2240
                     /locus_tag="VIQ99_08450"
     CDS             1131..2240
                     /locus_tag="VIQ99_08450"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014954010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY9183215.1"
                     /translation="MPAPMFHYIDGAADDEWTLRRNTAAFDACEFLPRALVDVSTIDM
                     STTLFGQRIDWPYFCAPTALQRLFHHEGEGATARAAHASGTIFSLSSVSSTKIEDAAK
                     LSPGPKVFQVYMFKDRSLSREFVQRARDSGYVALQLTVDVTVSGNRERDIVTGMTVPP
                     KLALMSLIDIAMKPKWVYKHLTTPKIEVANIAHRPPPGSEKLGGIIQFLNAQIDRSVT
                     WKDAEWMVKEWGGPFAIKGIMTGADAKRAADIGATAVMVSNHGGRQLDFSPAPFDVLK
                     EIVDAAGDRLEVILDGGVRRGTHILKALALGARACSAGRPHLYGLGAGGEAGVTQALK
                     ILKTELARDMALLGCPSIRDIDASVIRAVGASWAP"
     gene            2228..3100
                     /gene="fdhD"
                     /locus_tag="VIQ99_08455"
     CDS             2228..3100
                     /gene="fdhD"
                     /locus_tag="VIQ99_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015332714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEY9183216.1"
                     /translation="MGAIDEGGKQHAARRLDVRRFRAAELGRVDDPDIVATEEPFEIR
                     LGYSRRDGSRAEEPVSVTMRTPGNDEDLAVGFLFTEGIIRARSDVQEVVARGRRAADG
                     LINVVRVELTPGVPVDFKRLERNFYMTSSCGVCGKASIDAVAVQGQYDLDAVQFRIDG
                     AALGRLPAALKTEQAVFEQTGGLHASGLFDTAGTIVALREDVGRHNALDKLIGHALLN
                     GQVPLTAHGVIVSGRASFELMQKAKMAGVPLVAAVGAPSSLAVDLAREFGITLVGFLK
                     TDRFNVYSRPDRIH"
     gene            3104..4363
                     /gene="glp"
                     /locus_tag="VIQ99_08460"
     CDS             3104..4363
                     /gene="glp"
                     /locus_tag="VIQ99_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY9183217.1"
                     /translation="MPQLSQDCFASGAQILSVEHAVEAITAQFTPVEGVETVALADAD
                     GRVLAQDVIATLQLPPFTNSAVDGYAVRGEDIPNAEARLFRVAGRVQAGSAAAVPRVA
                     PGETIRIFTGAPMPDGADTVFMQEDVRIDEAGRALLPGGLKRGANVRPAGEDVTLGRV
                     VVPAKRWLRPQDVAAVAAMGLKQLGVRRRVKVAVFSTGDEIVEPGAVRRDTQVFDSNR
                     FMLLAMLRRIGCEVSDLGIRHDDSAEIANALKIAARSHDLILSSGGVSTGEGDFVKTA
                     IERVGTLVFWRIAMKPGRPVAMGVIGGTPFIGLPGNPVASFVTFAKVARPAILALAGA
                     EWSPPPPVPVRAQFSYRKKTARREYVRVHLRKAGQGVLEATKFPREGAGLLSSLVDTD
                     GVVELDEDITRVEPGTMLNCLTYASLL"
     gene            4375..>4950
                     /locus_tag="VIQ99_08465"
     CDS             4375..>4950
                     /locus_tag="VIQ99_08465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEY9183218.1"
                     /translation="MRPESPRSRRERGPKGRGVDDRALAEVRELLGTKPRRRDLLIEH
                     LHLIQDKFGCLEARHLRALAEEMRLSQAEVYEVASFYDHFDVVKEGEPRPAPLTIRVC
                     ESISCMIAGADELIEKLGAAVDPSEVRVVRAACVGRCAGAPAARVGNREVEHATVESL
                     LRDARARHTDVVVPKYVALAEYRKQRGYELYE"
BASE COUNT          834 a         1566 c         1730 g          820 t
ORIGIN      
        1 gtgctcgagg tgcacgttca ggagcttcgg attccgttcg agcagcatcg cgacggcgcc
       61 ggcgccctgt gtcggctcac cggagctgcc gcgcgcgtac tcggcgatgt cggccgccac
      121 gacgatcgcg cagcggtcct ccgtgtcgag ggcgagatag cgcagcgcgt gcttcaacgc
      181 gtacacgccg ccgagacacg cgtgcttgac ctccggaacc tcgcagtgcc gagatagacg
      241 ggctcgaccg ctcgcttcga gaccctcgtc gagcatgccc ttgatgatca cggcgccggc
      301 ggagttgtcg gtgctggact cggtgccgag tcccaagaag ccgacgcggc tcggatcgat
      361 gtcgtagcga tcgatcaggc gcatgacggc agtcgccgcc atcgtgtaga cgctctgggc
      421 cgggccccgc atccgaaagc tgttgccgac gacggcgcga gtcttgtccc aggcgttgtt
      481 ggtccagcga caccacgact cgaggtcgac gcggtagggt ggcacgtaaa cggcgaagcc
      541 gctgataccc acttggtcgg tcatagaact cccggcacct gccgttcaat ggcgccgttg
      601 ctcggccgcc acgatcactc cgcgcggcat tatatgacaa acagacggca atcaggctga
      661 taacgagcgg cgggccgccc aaccacgcgg agcctcgggc ccggcaacgg gtccggctgg
      721 tagaatgcgc cctccttgca gagccgggca ggcaatgaaa ctgtggattc gcggtaactc
      781 gctacgcctg cgagtttcga aaacggacct cgcgaagatc gccgagacgg ggatggccga
      841 ggacaccgtg cgtttctcct ccgagcagag cctgcgctac gcgatcgagg tgcggccgac
      901 aggggcgatc acggcgttgt tctcagggac cgagatcgtc gtgaccctgc cgaagcctcg
      961 gctggacctg tggctgcgac ccaacgaggt ctccgtcgaa ggcagccagc cgatcgggcg
     1021 cggcaaggtt ttgcagatcg tgctcgagaa ggacgatggg gcgccgcgtg ggtagtcgta
     1081 tcgagcgctg ctacaacatc gcagagctcc gtaagctcgc caaaacgaac atgccggccc
     1141 cgatgttcca ctacatcgac ggggcggcgg acgacgaatg gacgctgcgg cgcaacacgg
     1201 cggccttcga cgcgtgcgag ttcctaccgc gcgcgctcgt cgacgtctcg accatcgaca
     1261 tgtcgacgac gttgttcggc caacgtatcg attggccgta cttctgcgcg ccgacggcgc
     1321 tgcagcgcct gttccaccac gaaggcgagg gtgcgaccgc gcgtgccgca catgcgagcg
     1381 gcactatctt ctcgctgtcg agcgtttcat cgacgaagat cgaggacgcg gcgaagcttt
     1441 cgccgggccc gaaggtgttc caggtctaca tgttcaagga ccggagcttg agccgcgagt
     1501 tcgtgcagcg cgcccgggat tcgggctacg tcgcactgca gctcacggtc gacgttacgg
     1561 tgtccggcaa tcgcgagcgc gacatcgtca cgggcatgac cgtgcccccg aagctcgcgc
     1621 tgatgagctt gatcgacatc gcgatgaagc cgaagtgggt ctacaagcat ttgacgacgc
     1681 cgaagatcga ggtcgcgaac atcgcgcatc gcccgccgcc cggcagcgag aagctcggcg
     1741 gcatcatcca gttcttgaac gcgcagatcg accgcagcgt cacgtggaaa gatgccgagt
     1801 ggatggtcaa ggagtggggc ggcccgttcg cgatcaaggg catcatgacg ggcgcggacg
     1861 ccaagcgcgc cgcggacatc ggcgcgactg cggtcatggt ctcgaaccat ggcgggcggc
     1921 agctcgactt ctcgccggcg ccgttcgacg tgctgaagga gatcgtggac gcggccggcg
     1981 accggctcga ggtgatcctg gacggcggag tgcgccgtgg cacacatatt ttgaaggcgc
     2041 tcgcgctcgg ggcgcgcgcg tgctcggcgg gtcgcccgca tctctatggt ctcggcgcgg
     2101 gcggggaagc cggagtgacg caggcgctga agatcctgaa gacggagctc gcccgcgaca
     2161 tggcgttgtt ggggtgcccg agcattcgag acatcgatgc gagcgtgatt cgcgccgtgg
     2221 gtgcatcgtg ggcgccatag acgaaggcgg caaacagcac gcggcgcggc gcctcgacgt
     2281 gcgccggttc cgggccgcag agctcggacg agtcgacgat ccggacatcg tagccaccga
     2341 ggagccgttc gagattcgct tgggctattc gcgacgggac ggcagccgtg cggaggagcc
     2401 cgtctcggtc acgatgcgca cgccggggaa cgacgaggac ctggctgtcg ggttcctgtt
     2461 cacggaaggg atcatccgcg cgcgcagcga cgtgcaggag gtcgtggccc gcgggcggcg
     2521 cgctgccgac ggcctgatca acgtcgtgcg cgtggagttg acccccggag tgcctgtcga
     2581 cttcaagcgc ctcgagagaa acttctacat gacgtcgagc tgcggcgtat gcggcaaggc
     2641 gtcgatcgac gccgtggcgg tgcaaggtca gtacgatctc gacgcagtgc agtttcggat
     2701 cgacggcgcc gcgctcggcc ggctgcccgc ggccctgaag acagaacagg cagtcttcga
     2761 gcaaaccggc ggcttgcacg cgtcgggtct gttcgacacg gcgggcacga tcgtcgcgtt
     2821 gcgcgaggac gtcggccgtc acaacgcgct cgacaagctg atcggtcacg ctttgctgaa
     2881 tggacaagtg cctctgaccg cgcacggcgt catcgtcagc ggccgggcga gcttcgagct
     2941 gatgcagaaa gccaagatgg ccggcgtccc gctcgtcgcg gccgtcggcg cgccgtcgtc
     3001 gttggccgtc gatctcgcac gcgagttcgg catcacgttg gtcggttttc tcaagaccga
     3061 tcgcttcaac gtttacagcc gtccggaccg catccattag gacatgccgc aactctcaca
     3121 agactgcttc gcttccggtg cacaaatcct gtccgtcgag cacgcggtcg aagcgatcac
     3181 ggcgcagttc acgccggtcg agggggtcga gaccgtcgcc cttgccgatg ccgatgggcg
     3241 cgttctcgcg caggacgtga tcgcgacgct tcagctgccg ccgttcacga actcggcagt
     3301 agacggttac gccgtgcgcg gcgaggacat cccgaacgcc gaggcgcgac tgtttcgcgt
     3361 cgcgggccgg gtgcaagcgg gctccgcggc cgccgtgccg cgcgtcgcgc ccggcgagac
     3421 aatccggatc ttcactggcg caccgatgcc ggatggagcc gacaccgtgt tcatgcagga
     3481 ggacgtccgc atcgacgaag ccggtcgcgc gctgctaccg ggcgggttga agcgcggtgc
     3541 caacgtccgg ccggccggcg aggacgtgac gctcgggcgc gtggtcgtgc cggcgaagcg
     3601 ttggctccgc ccgcaagacg tcgcggccgt agccgccatg ggcctcaaac agcttggcgt
     3661 ccgcaggcgc gtgaaggttg ccgtgttttc gaccggggac gagatcgtcg agcccggagc
     3721 cgtcaggcgc gacacgcagg tcttcgactc gaaccgcttc atgctgctcg cgatgctgcg
     3781 gcggatcggt tgcgaggtca gcgacctcgg cattcgccat gacgacagcg cggagatcgc
     3841 gaatgcgcta aagatcgcgg ctcggtcgca cgatctgatc ttgagctctg gcggcgtctc
     3901 gacgggcgag ggcgatttcg taaagactgc gatcgaacgc gtggggacgt tggtgttttg
     3961 gcgcatcgcg atgaagccgg gtcggcccgt agcgatgggc gtcatcggcg ggaccccgtt
     4021 catcggcttg ccgggcaatc ccgtcgcgag cttcgtgacg tttgcgaagg tggcgcggcc
     4081 cgcgattctc gctctcgccg gcgcggaatg gtctccgcct cccccggtgc cggtgagagc
     4141 gcagttctcg tatcgaaaga agacggcgcg ccgcgagtac gtacgcgtcc acctgcgcaa
     4201 ggctgggcag ggcgtgctcg aggccaccaa atttccgcgc gagggggccg ggctgctatc
     4261 ctccttggtc gacaccgacg gcgttgtcga gctggacgag gacataacgc gcgttgaacc
     4321 ggggacgatg ttgaactgcc tgacgtatgc ctctctgctc tgagccgagt tccaatgaga
     4381 cctgaatcgc cacgttcgcg tcgtgagcgc ggaccgaaag gccgtggcgt cgatgatcgc
     4441 gccctcgcgg aggtccgcga attgctcggg accaaaccgc ggcggcggga cctattgatc
     4501 gagcacctgc acctgataca ggacaagttc gggtgcctcg aggctcggca tctccgcgcg
     4561 ctggcagagg agatgcgact gtcccaggcc gaggtctatg aggtcgcatc gttttacgat
     4621 catttcgacg tcgtcaagga gggcgagcct cgcccggcgc cattgacgat ccgtgtgtgc
     4681 gaatccatca gctgcatgat cgcgggtgcg gacgagctga tcgagaagct cggcgccgcc
     4741 gtagatccga gcgaggtccg agtcgtccgc gccgcgtgcg tcggtcgctg cgccggagcg
     4801 cccgcggccc gggtcggtaa ccgcgaggtc gagcacgcga ccgtcgagag cctgctgcgc
     4861 gatgcgcgcg cgcggcacac cgacgtggtc gtgccgaagt acgtcgcgct tgcggagtac
     4921 cgcaagcaac gcggctacga gctctacgag
//
LOCUS       DATCUD010000576         1653 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48251, whole genome shotgun sequence.
ACCESSION   DATCUD010000576 DATCUD010000000
VERSION     DATCUD010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48251"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1536)
                     /locus_tag="VIQ99_08470"
     CDS             complement(<1..1536)
                     /locus_tag="VIQ99_08470"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HEY9183219.1"
                     /translation="MQPACLIPLVTLAAFVAAGCRPSVEQQAAAAKSTIDRYCTDCHN
                     DAERTGELTLERAALDDVGTHAEIWEAVVKKLRGRMMPPAGEALPEADDAAELVAFLE
                     DRLDAAAAANPNPGVKSLHRLNRSEYGNAIRDLLAIEIDATALLPNDSEAYGFDNIAD
                     VLGTDPSLMDRYLSAAWKITSAAIGDVSLAPAVTTYRVPPDRSQTDYVEGLPLGTRGG
                     MLVSHYFPVDGEYVIKPRLWRNTVDVVRGTETPHDLEVSMDGARLSLTRFGGPEDEVP
                     AQMFPGQTADEIDRRFETRVTVTAGQHAVGVAFAKKSSATRQEVLQPFAREKHDARMD
                     VGIPELDQIVIEGPITIAGPGNSPSRERIFSCYPQDETQAAPCAEQILSTLARRAYRR
                     PITEAERARLKSLYEAERAQGRGFEAGVQTGLAYVLVAPQFLFRVEEDPAGAAPGTVY
                     RIGDLELASRLSFFLWGSVPDDELVELGLANRLSQADELERQVARMLEDPRASTLARS
                     FASQ"
BASE COUNT          258 a          547 c          561 g          287 t
ORIGIN      
        1 ttggctcgcg aagctccgcg cgagcgtcga tgcgcgtggg tcctccagca tccgcgcaac
       61 ctgtcgctcg agctcgtcgg cctggctcaa gcggttcgcg agcccgagct cgacgagctc
      121 gtcgtcgggc acgctgcccc acaggaagaa cgacaagcgc gatgcgagct cgaggtcgcc
      181 gatcctgtac acggtgccgg gcgcggcgcc ggccggatcc tcctcgacgc ggaacaggaa
      241 ctgcggcgcg acgagcacgt aggcgagccc ggtctgcacg ccggcttcga agccgcggcc
      301 ctgtgcccgc tcggcttcgt acaagctctt gagccttgcg cgttccgctt cggtgatcgg
      361 acgccgatac gcgcgcctcg cgagcgtgct caagatctgc tcggcgcacg gcgccgcttg
      421 cgtctcgtct tgcggatagc acgagaaaat ccgctcgcgg ctcggcgagt tgccgggccc
      481 tgcgatcgtg ataggcccct cgatcacgat ctgatcgagc tcggggatgc cgacgtccat
      541 gcgcgcgtcg tgcttctcgc gtgcgaacgg ttgcagcact tcttggcgcg tcgcagagct
      601 cttcttcgca aacgcgacgc cgaccgcgtg ctgtcccgcg gtcacggtca cgcgcgtctc
      661 gaaccgccga tcgatctcgt ccgcagtctg gcccgggaac atttgcgccg gcacctcgtc
      721 ctcgggaccg ccgaaacgcg tcaacgagag ccgcgcgccg tccatgctga cctcgaggtc
      781 gtgcggcgtc tctgtgcctc gcacgacgtc gacggtgttg cgccatagac gcggtttgat
      841 cacatactcg ccatcgaccg gaaagtaatg gctcacgagc atgccgccgc gcgtgccgag
      901 cggcaggccc tcgacgtagt cggtctgcga gcggtcgggt gggacacgat acgtcgtgac
      961 ggcgggggcg aggctcacgt cgccgatcgc ggcgctcgtg atcttccacg ccgccgacag
     1021 gtaacggtcc atcaacgacg gatcggtgcc gagaacgtcg gcgatgttgt cgaagccgta
     1081 ggcttcgctg tcgttcggga gcagcgcggt cgcatcgatc tcgatcgcga gcaagtcgcg
     1141 aatcgcgttg ccgtactcgc tacggttcag acgatgcagc gacttcactc cggggttcgg
     1201 gttcgcggcc gcggccgcgt cgagtcgatc ctcgagaaac gcgacgagct cggctgcgtc
     1261 atcggcttcg ggtagcgcct cgccggccgg tggcatcatg cggccgcgca gcttcttgac
     1321 gacggcttcc cagatctcgg cgtgcgtgcc gacgtcgtcg agcgccgcgc gttcgagcgt
     1381 cagctcgccg gtccgctcgg cgtcgttgtg acagtccgtg cagtagcggt cgattgtgct
     1441 cttcgccgcg gcggcctgct gctcgacgct gggccgacag cccgccgcga cgaatgcggc
     1501 aagcgtgaca aggggtatga ggcatgcggg ctgcataacc taaagaaact aatggagaaa
     1561 tgcttccaag ggtaggccga gcggctgaag aaacgtgggg gacccgggct tcaacgccac
     1621 aaaccaacta gatcgcgccg tgattgcgga ggg
//
LOCUS       DATCUD010000577         1648 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55505, whole genome shotgun sequence.
ACCESSION   DATCUD010000577 DATCUD010000000
VERSION     DATCUD010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55505"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..999
                     /gene="dnaB"
                     /locus_tag="VIQ99_08475"
     CDS             <1..999
                     /gene="dnaB"
                     /locus_tag="VIQ99_08475"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020560371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY9183220.1"
                     /translation="GGDIAASANATEGLTASEIVDRAEQRVFEIAEGGSRRGSGFVSL
                     KQILPKTIDRLDFLSHSPSEITGVSTGFVEMDKWTSGLQRGDLVIIAGRPSMGKTSLA
                     INIAENAALGNKVPAAIFSMEMSAEQLSFRMLSSIGRIGQQRLRTGKLLEEDWPRVDS
                     AVSMMSDAPIYIDDSGGLTPTDVRARARRLKREHGLGLIVVDYLQLMQVTGTAENRAT
                     ELSEISRSLKALAKELEVPVIALSQLNRSVEQRQDKRPVMSDLRESGALEQDADLILL
                     IYREEVYEKDTPRKGIADIIIAKQRNGPVGDFRLTFLGEFTKFENLAPEAYGEGVF"
     gene            complement(996..>1648)
                     /locus_tag="VIQ99_08480"
     CDS             complement(996..>1648)
                     /locus_tag="VIQ99_08480"
                     /inference="COORDINATES: protein motif:HMM:NF012708.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051219 - phosphoprotein binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HEY9183221.1"
                     /translation="INILNDSFLEDLNSTNGTYVNGKLIKKHALQHGDVITVGHHQLR
                     YVDDQAQQAPEDEFEKTMVIQPSGQMEKQVAQAARVAEAAASAAAAAAPQRPAPAPAP
                     AAAAPRRGFSPTTTQEVDESAVPALPLAKLQVLSGTFAGRELELVKALTTLGRPGVQV
                     AAITRRAEGYYIVHVESGKTEGYPLVNGMAIGAQARKLQDNDVIQLAGVKMGFFLS"
BASE COUNT          306 a          498 c          529 g          315 t
ORIGIN      
        1 ggcggcgaca tcgcagccag cgcgaacgcg accgaggggc tcaccgcgtc cgagatcgtc
       61 gaccgcgccg agcaacgcgt gttcgagata gccgaaggcg ggagccgccg cggctcgggg
      121 ttcgtttcgc ttaaacagat cctgccaaag acgatcgatc gactcgactt cttgagtcat
      181 tcgccaagcg agatcacggg cgtttcgacg ggttttgttg agatggacaa gtggacgtcg
      241 ggtctgcagc gcggcgatct cgtcatcatc gccggcagac catccatggg aaaaacctcg
      301 ttggccatta acatcgccga gaacgcggcg ctgggcaaca aggttcccgc ggccatcttc
      361 agtatggaga tgtcagcgga gcagttgagc tttcgcatgc tgagctcgat cgggcgaatc
      421 ggtcagcagc gactacgaac cggcaagctg ctcgaggaag actggccgcg cgtggactcc
      481 gccgtctcga tgatgtcgga cgccccgatc tacatcgacg acagcggtgg gttgacgcct
      541 acagacgttc gtgcgcgtgc gcgacggcta aagcgcgagc acggcctcgg attgatcgtg
      601 gtcgattacc ttcagctcat gcaggtcaca ggtacggcag agaaccgcgc aaccgagctt
      661 tcggagatct cgcgatcact gaaagcactc gcgaaggaac tggaagtacc cgtgatcgct
      721 ttgtcgcagc tcaatcgcag tgtcgagcag cgtcaagaca agcgtccggt gatgtcggat
      781 ctgcgcgaat cgggtgcctt ggaacaggac gcagacctga tactgctcat ttaccgtgaa
      841 gaggtctatg agaaggatac gccgcgtaaa ggcatcgcgg acatcatcat cgcgaagcag
      901 cgcaacggtc ccgtggggga tttccgtctc acgttcctcg gcgagttcac gaaattcgag
      961 aatctcgcgc cggaagccta cggcgaaggc gtcttctagc tcaggaagaa gcccatcttc
     1021 acgccggcga gctggatgac atcgttgtct tgcagcttgc gcgcctgcgc gccgatcgcc
     1081 atgccgttca cgagcgggta gccttccgtc ttgccgctct cgacgtggac gatgtagtag
     1141 ccctcggcgc gacgcgtgat cgcggcgacc tgcacgcccg gccgaccgag cgtcgtgagc
     1201 gctttgacga gctcgagctc tcgcccggcg aacgtgcctg acaaaacctg gagcttcgcg
     1261 agcggtagcg ccggaacggc gctctcgtcc acctcttgcg tcgtggtcgg cgagaagccg
     1321 cgacgtggcg ccgcggctgc gggagccggt gccggagctg ggcgttgcgg ggctgcggcc
     1381 gccgccgcgc tcgcggccgc ttcagcgact cgtgcagcct gagcgacttg cttctccatc
     1441 tgaccgctcg gctggatcac catcgtcttc tcgaactcgt cctcgggcgc ctgctgcgcc
     1501 tgatcgtcga cgtagcgaag ctggtgatgc ccaacggtga tcacgtcgcc gtgctgcaac
     1561 gcatgtttct tgatgagctt gccgttgacg tacgtgccgt tcgtgctgtt caagtcctcg
     1621 agaaacgagt cgttgagaat gttgatca
//
LOCUS       DATCUD010000578         1571 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34128, whole genome shotgun sequence.
ACCESSION   DATCUD010000578 DATCUD010000000
VERSION     DATCUD010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34128"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1553
                     /locus_tag="VIQ99_08485"
     CDS             198..1553
                     /locus_tag="VIQ99_08485"
                     /inference="COORDINATES: protein motif:HMM:NF013080.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY9183222.1"
                     /translation="MRRFSLLVSLAVAVVPLAAAHAQVADIRRPNVVLIITDDLGYGD
                     LGSYGATDLETPNIDGLARDGVRFTDFYANGATCSPTRTGLISGRYQQRYGLEQPLGS
                     QGASDHERGLPATGRSLPQLLKNNGYATALVGKWHLGWNDEFSPTAHGFDYFFGFKSG
                     YVDFYQHTAGSDSPLKADLFENDRAVEVPGYLTDLLTERSVRFIEQNAGRRFFIDVAY
                     NAPHWPYQRPDDPSVARDNARHLTPFDNPTSTRADYVAMVERVDRGVGEILAALERLG
                     LRDDTIVIFTNDNGGEWLSRNDPLFQRKGSVWEGGIRVPAIFRWPGHIAPGGVSSQVG
                     ITMDLTASILAATGTPVPSDAGLEGIDLFPVLEGRKPPIERTLFWRIAGARRQSAVRA
                     GDWKLLYDGPRALLFNVRTDPSERDDLIGERSEIAQRLAPLVAAWQEDVDDEAKRTAQ
                     H"
BASE COUNT          266 a          523 c          508 g          274 t
ORIGIN      
        1 ggaccgaatc gcctgccact tcacaccgcg gactgcgtgg ccgcaaggtc gtcggctcgg
       61 gtatcgacgc catcgcgttg ccgctgacgc taggcaggct cgcgagcggt cgtcgcgcgc
      121 gcttcggcaa ttgagttttg ccccgctcgc ggcgacactc ctcggcgcgc ctcggcgacc
      181 tgctcgaagg agacaacatg cgtcggttct cgctgctcgt gtcgctcgcg gttgccgtcg
      241 tgccgctcgc agcagcgcat gcgcaggttg cggacattcg gcgaccgaac gttgtgctca
      301 tcatcaccga tgacttgggc tacggcgatc tcggcagcta tggcgcaacg gatctcgaga
      361 ctcccaacat cgatggcctc gcgagagatg gtgttcgctt caccgatttc tacgccaacg
      421 gggccacgtg ctcgccgacg cggaccggcc tcatctccgg gcgttatcaa cagcgttacg
      481 gcttggagca gccgctcgga tctcaaggcg cgtcggatca tgagcgcggc ctgccggcga
      541 cggggcgatc gctgccacaa ctcctgaaga acaacggcta cgccaccgct ctcgtcggca
      601 aatggcacct cggatggaac gacgagttca gccccaccgc ccatggcttc gactactttt
      661 tcggcttcaa gagcgggtac gtcgatttct accagcacac ggccggcagc gactcgccgt
      721 tgaaggcgga tctgttcgag aacgaccgcg ccgttgaggt gccaggctac ctcacggacc
      781 tgctcaccga gcgatcggtg cgcttcatcg agcaaaatgc gggtcggcgg ttcttcatcg
      841 acgtcgctta caacgcgccg cactggcctt accagcgccc cgacgacccg tccgttgcgc
      901 gcgacaatgc aaggcacttg acgccgttcg acaaccctac gagcacacgc gccgattacg
      961 tcgctatggt cgagcgcgtc gatcgaggcg tcggcgagat cctcgcggcg ctcgagagac
     1021 tcggtttgcg cgacgatacg atcgtcattt tcaccaacga caacggcgga gaatggctgt
     1081 cgcgcaacga cccgctgttc cagcgcaaag ggtcggtatg ggagggcggt atccgcgtgc
     1141 ccgcgatctt tcgctggccg gggcacatcg cgccgggcgg ggtgtcgagc caggtgggca
     1201 tcacgatgga tctcacggca tccatccttg ccgcgacggg aacgccggtg ccgagtgacg
     1261 cgggcctcga aggcatcgat ttgttccccg tgctcgaggg acgcaagcct ccgatcgagc
     1321 gcacgctgtt ctggcgcatc gcgggcgctc gccggcaaag cgcggtgcgc gcgggcgact
     1381 ggaagctgct ctacgacggc ccgcgcgcgc tgctcttcaa tgtccgtacg gacccgtctg
     1441 aacgtgacga tctgatcggc gagcggtcgg agatcgcgca gcggctcgcg ccgctcgtcg
     1501 ccgcgtggca ggaagacgtg gacgacgaag cgaaacgcac agcgcagcac tagccgcgtt
     1561 agtcgcccgc t
//
LOCUS       DATCUD010000579         1928 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55529, whole genome shotgun sequence.
ACCESSION   DATCUD010000579 DATCUD010000000
VERSION     DATCUD010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1928)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1928)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1928
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55529"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..429)
                     /locus_tag="VIQ99_08490"
     CDS             complement(<1..429)
                     /locus_tag="VIQ99_08490"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY9183223.1"
                     /translation="MRSVSRVSNLVLRLEKRLITALAAALVVLILLNIVTRAAGAALF
                     WVDELAVYVMIWMALIGASAMLRMRTGVAVTLVTDLLPEAFRRVVHRVVDAVLLGLTL
                     TLLVLCWQWYDPVALFEAGFDLDVFAQNTFKFIYAEPTSTI"
     gene            complement(456..1469)
                     /locus_tag="VIQ99_08495"
     CDS             complement(456..1469)
                     /locus_tag="VIQ99_08495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007426139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY9183224.1"
                     /translation="MKPRVVSRHRCLALLVCSFAFAPGGALADRFRMGVPTAPSHVWT
                     IEANAFAANFAERTGGAHSIAVFPAGQLGNDAQMLQQLQTGALDMAFMPIAEITNRIP
                     ELGALYAPYLAADVAAAARLLASDEARGLLDQLPARMGVVGIGYSLAGMRQIISRGPV
                     QSLDDLRGRKLRITPLDPIRDFYVNVGAAPIPLPLGSVYDALANGQIDAVDMDLENIW
                     KQSYYDLAETVILSNHMMFPMVGLVSAARWRTLDPELKATITELMTQHFERIAVTYIE
                     AEREYEAELKAAGIEVLPVGPEFFGPVLAQWEERWRPKAPVLARLRQLAAAAESGSAQ
                     TGQ"
     gene            1651..>1928
                     /locus_tag="VIQ99_08500"
     CDS             1651..>1928
                     /locus_tag="VIQ99_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007579368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183225.1"
                     /translation="MSTPTYRIFAIKYAQVGRKAWGNFVDGDPHEDWDMPLDYYVWAI
                     VGGSRTFVVDTGFDAPMAKKRDRKIVHPVDEGLAAVGVRHADVEDVIVT"
BASE COUNT          372 a          613 c          641 g          302 t
ORIGIN      
        1 gatggtgctg gtgggctcgg catagatgaa cttgaacgtg ttttgggcaa agacgtcgag
       61 atcgaaaccc gcctcgaaca gcgcgacggg gtcgtaccac tgccagcaga ggaccagcag
      121 ggtgagtgtc agacccagta ggacggcatc cacgacccta tggacgacgc gtcggaaagc
      181 ctccggaaga agatccgtca ccagcgtcac ggcgacgccc gtgcgcatcc tcagcatcgc
      241 cgacgccccg atcagcgcca tccagatcat cacgtagacc gcgagctcgt cgacccagaa
      301 gagcgccgct cccgcggccc gggtcacgat gttgagaaga atcagcacga ccagcgcggc
      361 agcaagagcg gtgatcagcc gcttctcgag acggaggacc aggttcgaga cgcgcgagac
      421 ggagcgcatg atgggcgttt tggagagggc cggcgctatt ggccggtttg ggccgagccg
      481 gactcggccg ccgccgcgag ctgccgcagc cgtgcgagca cgggggcttt cggccgccag
      541 cgctcctccc actgcgccag caccggtccg aagaactcgg gacccaccgg caagacctcg
      601 atgcccgcgg ccttgagctc agcttcgtac tcgcgctccg cttcgatgta agtgacggca
      661 atacgctcga agtgctgcgt catgagctcg gtgatcgtgg ccttgagctc cggatcgagc
      721 gttctccatc gggcggcaga gacgagacca accatcggaa acatcatgtg attggagagg
      781 atcacggtct cggccaagtc gtagtagctc tgtttccaga tgttctcgag gtccatgtcg
      841 acggcatcga tctgcccgtt cgcgagcgcg tcgtaaaccg agcccaacgg cagcgggatc
      901 ggcgccgctc caacgttcac gtagaagtct cggatagggt cgagcggcgt gatgcggagc
      961 ttccgtccac gaagatcgtc gagcgactgc acagggccac gcgagatgat ctggcgcatg
     1021 ccggcgagcg aatagccaat tcccacgacg cccatgcggg ccggcagctg atcgagcaaa
     1081 ccgcgggcct cgtcgctggc gaggagcctg gctgccgccg cgacgtcggc cgcgagataa
     1141 ggagcgtaga gcgcgccgag ctcggggatc cggttcgtga tctcggcgat cggcatgaac
     1201 gccatgtcga gcgcgccagt ctgcaattgc tggagcatct gcgcatcgtt gccgagctgg
     1261 cccgccggga acacggcgat gctgtgcgcg cctccggtcc gctcggcaaa attcgccgcg
     1321 aacgcgttcg cttcgatggt ccagacgtgg ctcggcgccg tcggcacgcc catgcgaaac
     1381 cgatcggcga gcgcaccacc gggcgcaaac gcgaacgagc acacgagcaa ggccaagcaa
     1441 cggtgacggc ttacgacacg aggcttcatg agcggattat agcgagcttg gcaggacgcg
     1501 gagagcccga tcgatcgacg agcgcgaccc tgcccgctgc ctcgccatgg cttctcgtac
     1561 ggagccggat gccggccgcg ctcgtcgtgc gcggcgctcg ccaagtacaa tctcgggcat
     1621 cgccgcttgc ggtaacgagc ttgagcctcg atgagcacac cgacctatcg aatcttcgcg
     1681 atcaagtacg cccaggtggg ccgcaaggct tggggcaact tcgtcgatgg cgatccgcac
     1741 gaagactggg atatgccgct cgactactac gtgtgggcca tcgtcggcgg cagccgtaca
     1801 ttcgtcgtcg ataccggatt cgatgcgccg atggcgaaga agcgcgaccg caagatcgtg
     1861 cacccggtcg acgaaggctt ggcggcggtc ggcgtgcgcc acgccgacgt cgaggacgtg
     1921 atcgtcac
//
LOCUS       DATCUD010000580         1601 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34144, whole genome shotgun sequence.
ACCESSION   DATCUD010000580 DATCUD010000000
VERSION     DATCUD010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1601
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34144"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VIQ99_08505"
     CDS             complement(<1..508)
                     /locus_tag="VIQ99_08505"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9183226.1"
                     /translation="MFITQKHLARRSFLKGMGATVALPLLDAMVPAFAATTPATPRVG
                     FVYVPHGMVMKRFTPDTAGYGFEFKDINRSLEPYRARLSIVSRLHHRAADSSAVHSLS
                     PTTWLSGVRPKPTQGVDAYAGVTADQIAASVIGQDTLLPSMELATEDHAGLIGACDRD
                     YGCIYMNTL"
     gene            complement(668..1447)
                     /locus_tag="VIQ99_08510"
     CDS             complement(668..1447)
                     /locus_tag="VIQ99_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183227.1"
                     /translation="MTMIRLGCAVAIAAALTACLPPESEAPAADSSPPPTAHPDLSGV
                     WMAFAVESPDGARTPQYSPEGEAMLAAFAAQFTQVPETGAWCYGSGMPGMMLSTVSYP
                     IEIVQHPTRLVMVAELETQVRRVYLDGRPHPDDFPPQGVGHSVGTWDGDTLVIDTALL
                     SEWPMRPWPRTEQMRIVERVHLTKLGLVAARPTGFVATVEKPINDDVLVIEMTITDPA
                     VYAGPERRTAYYQRMADTATLEYACSAEHWLEELEKNRVSR"
BASE COUNT          266 a          538 c          526 g          271 t
ORIGIN      
        1 acagcgtgtt catgtaaatg cagccgtaat cgcggtcgca cgcgccgatc aggcctgcat
       61 gatcctcggt cgcgagctcc atgctcggca gcagagtgtc ttggccgatc acgctcgcgg
      121 cgatctggtc cgcggtgacg ccggcatagg catccacgcc ttgggtcggc ttcggccgca
      181 cgccggagag ccaggtcgtc gggctcaacg agtggacggc cgacgaatcc gcggccctgt
      241 ggtggaggcg gctcacgatg ctcaagcgag cgcgataggg ctcgagcgaa cggttgatgt
      301 ccttgaactc gaagccatag cccgccgtgt ctggcgtgaa gcgcttcatc accatgccgt
      361 gtggcacgta cacgaagccg actcgcggcg ttgccggcgt cgtggccgcg aacgcgggca
      421 ccatggcgtc cagcaggggc agggccacgg tagcgcccat acccttcagg aagctgcgtc
      481 gtgcgaggtg tttctgggtg atgaacattc cgagccgctc ccccgagagc tgcgattaac
      541 cgcttgaaaa gtgtagcgaa tgaccgcccg gaacccaatc ggtcggcaca cacttttgcc
      601 tgtcggaaac tacttaactc gaccgcagtg ccgcgttttc aggggtttgc cgcggccggg
      661 gcggacctca acgcgacact cgatttttct caagctcctc gagccagtgc tcggccgagc
      721 atgcgtattc cagcgtcgcg gtgtcggcca tccgctgata gtacgcggtg cgccgctctg
      781 gacccgcgta cacagcgggg tccgtgatcg tcatctcgat cacgagcacg tcgtcgttga
      841 tcggcttttc gaccgtcgcg acgaacccgg tcggtcgagc cgcgacgagc ccaagcttcg
      901 tcaggtggac gcgctcgacg atccgcatct gctccgtgcg cggccatggc cgcatcggcc
      961 attccgaaag caacgcggtg tcgatcacga gcgtatcgcc gtcccaggtg ccgaccgagt
     1021 ggccgacgcc ctgcggcggg aaatcgtccg ggtgcgggcg cccgtccaag tacacgcgcc
     1081 gcacctgcgt ctcgagctcg gccaccatca cgagccgcgt cgggtgctgc acgatctcga
     1141 tcggatacga cacggtcgac agcatcatgc ccggcatgcc cgagccgtag caccacgcgc
     1201 cggtctcggg aacctgcgtg aactgggccg cgaacgccgc gagcatggct tcgccctcgg
     1261 gcgagtactg cggcgttctg gccccgtccg ggctctcgac ggcgaacgcc atccagacac
     1321 cagagagatc cggatgcgcg gtcggcggcg ggctcgagtc tgcggccggt gcctcggact
     1381 ccggcggcaa gcaagcggtc agcgccgccg cgattgcaac agcgcagccc aaacgaatca
     1441 tcgtcatgac gtctccctgg gcgaatgccc cgcagtgctc taccgcgggc atcccgcgcc
     1501 cgagccgcgc cagtatgtcg cggaacttcg tgcgaggtaa gctggcgcga tgaaagacct
     1561 ttctcgcgcg tcgagtcggc gcgcgtttct cggcggagcc g
//
LOCUS       DATCUD010000581         1592 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98268, whole genome shotgun sequence.
ACCESSION   DATCUD010000581 DATCUD010000000
VERSION     DATCUD010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98268"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1592)
                     /locus_tag="VIQ99_08515"
     CDS             complement(<1..>1592)
                     /locus_tag="VIQ99_08515"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9183228.1"
                     /translation="NYPAGTYVGHESIRKHLYMNVGGGQVGDNGLPDNRIYNHINMQP
                     VVHLDPGGQTAKGRWRAFAMFGTFGGGATWAEGVYEMTYAKVDGVWKIRQLDYHSGFG
                     APYATGWVPPEPAPASGGAAAPRGPRNLPHPADRPRSESCAGFPAACVGPFHYTNLGV
                     TDAGHVWTTVSLPAATGRRPAARDRAAGLAARAQRLGDEQEIENLQKIYGYYYDRRMW
                     DEVADLFADDGTIEMAQRGVYVGKARVREFLNLLGPVGLEDGDLFDHVQLQVVVSVAE
                     DGRTAKARSRELNMTGVFESHGEWSEGVYENTFVKDGGVWKIKDLRYFPTFISAYDKG
                     WAADAQPAPAASAELPPDRPPTSVYAIYPKAHIPPYHYDNPVTGAPPRYPEARGRPSD
                     VAIAAVRADVAAPRAARGRPPQRELDVIVAETEAKIGRVKDFHEIDNVVSAYGYYLDK
                     NLWNDLANLFAVDGSIELAQRGSYIGRERVRAFLFNVFGKEGPTENRLGNHLQYQAVI
                     HVADDGQTAKVRSRMMQQLNFG"
BASE COUNT          235 a          553 c          529 g          275 t
ORIGIN      
        1 acccgaagtt cagctgctgc atcatccgcg aacgaacttt ggccgtctgg ccgtcgtcgg
       61 ccacgtgaat cacggcctga tactgaaggt gattgccgag ccggttctcg gtcgggcctt
      121 ccttgccgaa cacgttgaac aagaacgcgc gcacgcgctc gcggccgata taggagccgc
      181 gctgcgcgag ctcgatcgag ccgtccaccg cgaacaaatt cgcgagatcg ttccagagat
      241 tcttgtcgag gtagtagccg tacgcgctca cgacgttgtc gatctcgtgg aagtccttga
      301 ctcgaccgat ctttgcctcg gtctccgcga cgatcacatc gagctcgcgc tgcggcggcc
      361 ggccgcgcgc ggcgcgcggt gccgcgacgt ccgcgcgcac cgcggcgatc gcaacgtcgc
      421 tcgggcggcc gcgcgcctcc ggatagcgcg gcggtgcgcc cgtgacgggg ttgtcgtagt
      481 ggtacggcgg gatgtgggcc ttcggataga tcgcatagac gctggtcggc ggccggtcgg
      541 gcggcaactc ggcgctcgcg gccggcgcgg gttgcgcatc ggcggcccag cccttgtcgt
      601 aggccgagat gaacgtcggg aagtagcgca ggtccttgat cttccagacg ccgccgtcct
      661 tgacgaacgt gttctcgtag acgccttcgc tccactcgcc gtggctctcg aagactcccg
      721 tcatgttcag ctcgcggctg cgcgccttcg cagttcggcc gtcctcggcc acgctcacga
      781 cgacttgtaa ttgcacgtga tcgaacaggt cgccgtcctc gagcccgacc ggaccgagca
      841 gattcaggaa ctcgcgcacg cgcgccttac cgacatagac gccgcgctgc gccatctcga
      901 tcgtgccgtc gtcggcgaac aggtccgcga cctcgtccca catgcggcgg tcgtagtagt
      961 agccgtagat cttttgcagg ttctcgatct cctgctcgtc gccgaggcgc tgtgcgcgcg
     1021 cggccaagcc tgccgcgcga tcgcgcgcgg cgggacgccg gcccgtcgcg gccggcagcg
     1081 acacggtcgt ccacacgtgc cccgcatccg tgacgcccag attcgtatag tggaacggcc
     1141 cgacacacgc cgcggggaag ccggcgcacg actcgctgcg gggccgatcg gccggatggg
     1201 gcaggttccg cgggcctcgc ggcgcagcgg cgccgcccga cgcgggcgcg ggctccggcg
     1261 gaacccagcc cgtcgcgtat ggcgcaccga accccgagtg ataatcgagc tggcggatct
     1321 tccacacgcc gtcgaccttc gcgtacgtca tctcgtacac gccctcggcc cacgtggctc
     1381 cgccgccgaa cgtgccgaac atcgcgaacg cgcgccagcg gcccttcgcg gtctgcccac
     1441 ccgggtcgag gtgcacgacc ggctgcatgt tgatgtggtt gtagatccgg ttgtcaggca
     1501 agccgttgtc gccgacctgg ccgccgccga cgttcatgta gaggtgctta cggatgctct
     1561 catgaccaac gtacgtgccg gcgggatagt tc
//
LOCUS       DATCUD010000582         1629 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55536, whole genome shotgun sequence.
ACCESSION   DATCUD010000582 DATCUD010000000
VERSION     DATCUD010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55536"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1629
                     /locus_tag="VIQ99_08520"
     CDS             <1..>1629
                     /locus_tag="VIQ99_08520"
                     /inference="COORDINATES: protein motif:HMM:NF013867.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CheR family methyltransferase"
                     /protein_id="HEY9183229.1"
                     /translation="VELLAKQTLVPVREATHGERVKANHVYVIPPNKHLRIKRGRIEL
                     TVPPNARELPAAIDHALASAALDRGDAAIGIVLSGTGSYGVTGIEEIKAAGGLVLVQD
                     PATAEFEQMPRSALATGLVDHALAPERMPEVLVRYVRHRHTADQAEAEPSDLELDGLR
                     GVLALLLVRTKNDFRHYRKSMIMRRIRRRMALLEIEDPEAYVRYLSDNADEVQALLRD
                     LLIGVTAFFRDPEAFAALAENVVPKLVARASTEAPVRVWVPGCASGEEAYSIAILLLE
                     QFRAADKVESIQIFATDIDERALDVARQGVYPDSIAAAVSPERLKRFFVKVDQHHYQV
                     SKQLRDSIVVAPQNLISDAPFSRLDLISCRNVLIYLEPHIQEKVISLLHFSLQPDGYL
                     LLGPAESVGRASAIFEPVSQKWRLYRRTGPVRRDRVSIPIAASDEQQACHVLRLDDRP
                     RRHGAADVAAVPAHARLGFADRAALPHGVLAHGADLSAQTLPSHREQVLRRLACRELD
                     IVHDGPLHQQNLVVAVDQDRSGRKLFGEQFLHESR"
BASE COUNT          289 a          521 c          530 g          289 t
ORIGIN      
        1 gtcgagttgc tggcgaagca gacgttggtg ccggtgcgcg aggcaaccca cggcgagcgc
       61 gtcaaggcga accatgtcta cgtcatcccc ccgaacaagc acctgcgcat caagcgaggc
      121 cggatcgagc tcaccgtgcc gccgaatgcg cgcgagttgc ccgcagccat cgaccacgcc
      181 ctcgcgtcgg cggcgctcga tcgcggtgat gctgcgatcg gcatcgttct ttccgggacg
      241 ggcagttacg gagtcacggg aatcgaagag atcaaggccg ccggcgggct cgtgctcgtg
      301 caggatcccg cgacggcgga gttcgagcag atgccacgta gcgcgttggc gacggggctc
      361 gtcgatcacg cgctggcgcc cgaaaggatg cccgaggtgc tggtgcgata cgtgcgtcac
      421 cgacacacgg ccgaccaggc cgaggccgag ccctcggacc tggagctcga cgggttgcgc
      481 ggcgtgctgg ctctgctgct cgtgcggacg aagaacgatt ttcgtcacta tcgcaagagc
      541 atgatcatgc ggcggattcg ccggcgcatg gcgcttctgg agatcgagga ccccgaagct
      601 tacgtcaggt acttaagcga caacgccgat gaagtccagg cgctcttgcg cgacctcctg
      661 atcggcgtga cggcgttctt ccgcgacccg gaggccttcg ccgcgcttgc ggagaacgtg
      721 gtccccaagc tcgtggcgcg agcgagcacg gaggctcccg ttcgagtatg ggttccgggc
      781 tgcgcaagcg gcgaggaagc ctactcgatc gcgatcctcc tgttggagca gttcagagcg
      841 gcggacaaag tcgagagcat tcagatcttt gccaccgaca tcgacgagcg cgcgttggac
      901 gtcgcccgcc agggcgtcta tccggacagc attgcggcgg ccgtctcgcc ggagcgcttg
      961 aagcggtttt ttgtcaaggt cgaccagcat cactatcaag tcagcaagca gttgcgcgat
     1021 tcgatcgtcg tcgctccgca aaacctgatc agcgatgcgc cattctcgcg gctcgacttg
     1081 atcagctgca gaaacgtctt gatctatctc gaaccgcaca tccaagaaaa agtcatctcg
     1141 ctgctgcact tctcgttgca gccggatggg tatctgctgc tcgggccagc cgaatcggtc
     1201 ggccgggcct cggcgatatt cgaacccgtg tcccagaaat ggcgccttta tcggcgtacc
     1261 gggccggtgc ggcgcgatcg cgtcagcatc ccgattgctg ccagcgacga gcagcaggcc
     1321 tgccatgtcc ttcggctcga cgatcggccg cgccgtcacg gtgcagcgga cgtagctgcc
     1381 gttccggcgc acgcgcgcct cggcttcgcg gaccgtgcgg ccctcccgca cggcgtgttg
     1441 gcacacggag cggatctcag tgcgcaaacc ttgccgagcc atcgcgagca ggttcttcgt
     1501 cggctcgcct gccgggaact cgatatagtt cacgacgggc ccctgcacca gcaaaatctc
     1561 gtagtcgcgg ttgatcaaga cagaagcggg cgcaaactct tcggcgagca gtttctgcac
     1621 gagtcgcga
//
LOCUS       DATCUD010000583         1511 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_76929, whole genome shotgun sequence.
ACCESSION   DATCUD010000583 DATCUD010000000
VERSION     DATCUD010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76929"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..456)
                     /locus_tag="VIQ99_08525"
     CDS             complement(<1..456)
                     /locus_tag="VIQ99_08525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183230.1"
                     /translation="MRNDVLRLGAAVLMTFAVTSASAQSVAKIDFESVGRAWPLEADL
                     NTYHMTGATLRRTLGNPAQRSQIPPDPRRDPTTGFVGSARDGATPPGIEPLAVDLFTT
                     SDFYKDRALWSDPRYFRCNSSAALEDFWGEERLIGDDPPKSAPWGYCDRD"
     gene            792..>1511
                     /locus_tag="VIQ99_08530"
     CDS             792..>1511
                     /locus_tag="VIQ99_08530"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9183231.1"
                     /translation="MRDRPTDPPPTTPYDVVLETGLLRLRHYRPETPRAGSAPVLLIH
                     SLLKRPYILDLVPERSVVRSVLRQGSPVYLTDWLPPSDRDAGRGLQDYVESDLASAVD
                     GIMRIERVDGVALVGCCLGGFLAALYAALHPQDAKALAVLALPFQSRPPFVPAVAEYL
                     ARLYGNVPASWLRAALNARVADPASVPGFLAAELGEPELASPSASADALALRRAFATW
                     LTSDVPFAGRLFSDVMGDAYGR"
BASE COUNT          226 a          513 c          495 g          277 t
ORIGIN      
        1 gtcgcggtcg cagtaacccc acggcgcaga cttcggcgga tcgtcgccga tcagcctctc
       61 ctcgccccag aagtcctcga gcgcggccga gctgttacag cggaagtagc gaggatcgct
      121 ccacagagcg cgatccttgt agaagtccga cgtcgtgaac agatccaccg cgagcggttc
      181 gatgccgggc ggcgtcgcgc cgtcacgcgc cgaacccacg aagccggttg tgggatcgcg
      241 ccgcggatca ggtggaatct gcgaacgttg ggccgggttg ccgagtgtcc gccggagcgt
      301 cgcgccggtc atgtgatacg tgttcaggtc ggcctcgagc ggccacgccc gcccgacgct
      361 ctcgaaatcg atcttcgcga cgctctgcgc ggatgcggag gtcacggcga acgtcatcaa
      421 cacggcggcg cccagccgca agacatcgtt tctcatgatg gtctcaactc gtcgtgcaga
      481 tcggtagtct agctgcttcg gggcgcccgg acccggcggt tgacagcccc tgagcgtgct
      541 cttggcggct ctgagtcgag cgttcgcgcc gcctccatcg cggcttctac gcgcggcgca
      601 cgcgcgagct ccatacgaac ttctgcgagc gcgctagagc gagggaaacg ccgaagcccg
      661 cgactgatac acatcggact gcgctggtga tccgtcattg ccccgagtgg cgtcgccgca
      721 aagccatcga atacgtacaa acgcgagtgt gcgtggcgtc ggctcgaccg tagcgttccc
      781 ggatggtcag catgcgcgat cgtccgacag atccgccgcc gacgacgccc tacgatgtgg
      841 tgctcgagac gggcttgctg cgtctacgcc attatcgccc cgagacgccg cgggcgggct
      901 ctgcacccgt tctgctgatc cactcgctgc tcaaacggcc gtacattctg gacttggtgc
      961 ccgagcgcag cgtcgtgcgc agcgttttgc gccaaggttc tccggtctat ctcacggatt
     1021 ggttaccacc atcggacagg gacgcagggc gcggcttgca ggactacgtc gagtcggacc
     1081 ttgcaagcgc cgtcgacggc atcatgcgca tcgagcgcgt cgacggcgtc gcgctcgtcg
     1141 gctgttgcct gggtggattc ttggcggcgc tgtatgcagc gctgcacccg caggacgcca
     1201 aggcactggc cgtgcttgcg ctgccgtttc aatcccggcc gccattcgtg ccggcagtcg
     1261 ccgaatatct cgcacgtctc tacggcaacg tgccggcctc gtggctccgc gcggcgctca
     1321 atgcgcgcgt cgcggatcca gcctccgtgc ccggattctt ggctgcggag ctcggtgagc
     1381 cggagctcgc gtcgccctcc gcctcggcgg atgccttggc gctcaggcgc gccttcgcaa
     1441 cctggctcac cagtgacgtg cccttcgcgg gccggctttt ttccgacgtc atgggtgacg
     1501 cgtacggacg c
//
LOCUS       DATCUD010000584         1504 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91042, whole genome shotgun sequence.
ACCESSION   DATCUD010000584 DATCUD010000000
VERSION     DATCUD010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91042"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /gene="lptF"
                     /locus_tag="VIQ99_08535"
     CDS             <1..991
                     /gene="lptF"
                     /locus_tag="VIQ99_08535"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR04407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEY9183232.1"
                     /translation="ILGDAAADRLPREAVLAIFGLTALRYLTLLMPITLFLGVTLALA
                     RLNRDGEMAALSACGIGSTRLLVPIGSFTLVLVFASSWLALVSTPAASARIEEIRFQA
                     EQNVELAAIEPGKFTSPDAGDTVLYAREVVGDELHDVFLQTQQGDRVIAILAERGRRV
                     VNEQDGEQSFVLYDGRHYEGVPGEGDFLVVESFDEHGIPVRLEREKEFVEAAAAKPTA
                     DLLRSASLADRAELHWRLSWPLSLFVLGLLAVPLSRTAPREGRYARLGMALFIYLIYT
                     NLLSIGRVWVERGVVSDAVGLWWVHALVALVALWMLAREGGWFISARPIKVQA"
     gene            988..>1504
                     /locus_tag="VIQ99_08540"
     CDS             988..>1504
                     /locus_tag="VIQ99_08540"
                     /inference="COORDINATES: protein motif:HMM:NF015684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY9183233.1"
                     /translation="MTLLRNYLVSSVLRGVATVLAVLVVVTSAIEFVGQLNDVGTGDY
                     GVRAALTYVALRVPRTVFTTLPIAALIGALLSLGNLAVHRELVVMRASGVSSWQLLSA
                     VGLAGFVLAVLMVLLGESVAPSLGAYANEMRTRAINEDLAVAKGQATWLRDGDRILSL
                     RRQSGDVGYEAG"
BASE COUNT          211 a          452 c          524 g          317 t
ORIGIN      
        1 tatcctcggc gatgcagcgg ccgatcggct gccgcgagag gccgtgctgg cgattttcgg
       61 gctcacggcg ttgcgctatc tgactctgct gatgccgatt acgctgtttc tcggcgttac
      121 gctcgctctc gccagattga atcgcgacgg cgagatggcg gcgctgtcgg cgtgcggcat
      181 cgggtcgaca cgtttgctgg tgccaatcgg gagcttcacc ctcgtgctgg tcttcgcatc
      241 gagctggctc gcgctcgtct cgacccccgc ggcgagtgcg cgaatcgagg agattcgctt
      301 tcaagcggag cagaatgtgg agcttgctgc gatcgagccc ggcaaattca cctcgccgga
      361 cgccggcgac accgtgctct acgcgcgcga agtcgttggg gacgagcttc acgacgtctt
      421 cctgcagacg cagcagggcg accgagtgat cgcgatcctc gccgagcggg ggcgcagggt
      481 cgtgaacgag caagacggcg agcaatcgtt cgtgctctac gacggtcgtc attacgaagg
      541 cgtgcccggc gaaggtgact ttctcgtggt cgaatcgttc gatgagcacg ggatccccgt
      601 gcgcctggag cgtgagaagg agttcgtcga ggcggccgcc gcgaaaccga cggccgactt
      661 gctacggtcc gcctcgctgg cggatcgcgc ggagctgcac tggcgtctgt cgtggccgct
      721 gtcgttgttc gtgctcggcc tgttggctgt gccgctcagc cgtaccgctc ctcgcgaggg
      781 tcgttacgcg cgactcggca tggccctgtt catttatttg atctacacga acctgctctc
      841 gatcggccgg gtttgggtcg aacgcggtgt cgtcagcgac gcggtgggcc tttggtgggt
      901 ccacgcgctc gttgcgctgg tcgccttgtg gatgctggcc cgggaaggcg gctggttcat
      961 aagcgcccgc ccgatcaagg tgcaggcgtg acgttgctcc gaaactatct cgtgagctcc
     1021 gtgctgcgtg gtgtcgcaac cgtgctggcc gtcctggtcg tcgttacttc ggcgatcgaa
     1081 ttcgtcggcc agctcaacga tgtcggcacg ggcgactatg gtgtgcgcgc tgccctgacc
     1141 tacgtcgcac tgcgcgtgcc gcggaccgtg ttcacgacgt taccgattgc cgcacttatt
     1201 ggcgccctgt tgagtctcgg caacttggcc gtgcatcgcg agctcgtcgt catgcgagcg
     1261 agcggagtgt cgtcctggca actgctttcc gcggtcggtc tcgccgggtt cgtgctggcg
     1321 gtgttgatgg tgctgctcgg ggaatcggtg gcaccgtccc tcggtgcgta cgcgaacgag
     1381 atgcgtacgc gggcaatcaa tgaagacctg gctgtcgcca agggccaagc tacgtggctg
     1441 cgcgacggag atcgaatctt gagtctccgg cggcagtcgg gggacgtggg ctacgaagcc
     1501 ggcg
//
LOCUS       DATCUD010000585         2638 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19998, whole genome shotgun sequence.
ACCESSION   DATCUD010000585 DATCUD010000000
VERSION     DATCUD010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19998"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2178)
                     /gene="leuS"
                     /locus_tag="VIQ99_08545"
     CDS             complement(<1..2178)
                     /gene="leuS"
                     /locus_tag="VIQ99_08545"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014067706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEY9183234.1"
                     /translation="MAYPFKQIESKWQAHWEAKATFRTPANIDTSKPKYYALDMFPYP
                     SGDGLHVGHPEGYTATDIVARYKRMRGFNVLHPMGWDAFGLPAEQYAVRTGTHPRVTT
                     ERNIKRFREQLKALGFSYDWEREVNTTDPAYYKWTQWIFKQLFERGLAYQEELPVWWC
                     PELGTTLANEEVIDGKSEVGGFPCVRRPLRQWVLKITAYADALLDGLEDLDWPNSTKE
                     MQRNWIGRSEGAEIDFTVAGHAGVALRVFTTRPDTLFGATYMVLAPEHTLVAKLTTAA
                     QRAAVDAYREAASRKSELERTELQKDKTGVFTGAYALNPATGKEIPIWIADYVLAGYG
                     TGAIMAVPAQDQRDFEFAAKFGLPVIRTVQPPADFDGNSAWLGDGVAINSGFLNGKNV
                     ADAKAAMIDWLERERKGERRVNYKLRDWLFSRQRYWGEPFPIVFVDGKPQTVTDDELP
                     VLLPELDDFKPSGSPEGPLAKAGAWLEVVDPKTGKKARRETNTMPQWAGSCWYYLRFI
                     DPKNPTALVDPELEKYWQPVDLYVGGAEHGVLHLLYARFWHRVLYDAGIVSTPEPFKK
                     LVHQGIILGELEFSVNGERVSEDDVEKRGDKFVLRAQPDVVVEARAYKMSKSRGNVVN
                     PDGIIERYGADAFRLYEMFLGPLEQVKPWNTRGVEGMARFLNRAWRLVAGSDADDARS
                     AGNAPPVDGSEPTRDQQRLLHQTIAKVTEDIEAMRFNTAISALI"
     gene            2243..>2638
                     /gene="lptE"
                     /locus_tag="VIQ99_08550"
     CDS             2243..>2638
                     /gene="lptE"
                     /locus_tag="VIQ99_08550"
                     /inference="COORDINATES: protein motif:HMM:NF016290.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HEY9183235.1"
                     /translation="MQQLFSRPGCKRSARASLGLSFVLGLTGCGFHLQGAGTLPSSMT
                     RTFVETEEPHSEFMVSLTDVLRQRGAEVLAAPEAGAAVLDISLDDTGQRVLSVSSRNI
                     PREYEVYYTITFSLSVGAESLIQRESLVAT"
BASE COUNT          388 a          878 c          873 g          499 t
ORIGIN      
        1 aatgagcgcc gagatcgccg tgttgaagcg catggcctcg atgtcttccg tgaccttggc
       61 gatcgtctgg tgcagcaaac gctgctggtc gcgcgtcggt tccgagccgt cgaccggcgg
      121 cgcgttgccc gcgctgcgcg cgtcgtcggc gtcgctgccg gccacgaggc gccacgcgcg
      181 attcaggaac cgcgccatgc cctcgacgcc gcgcgtgttc cacggcttca cctgctcgag
      241 cgggcccaag aacatctcgt agagccggaa cgcgtcggcg ccgtagcgtt cgatgatccc
      301 gtcggggttc acgacgttgc cgcggctctt gctcatcttg tacgcgcgcg cctcgacgac
      361 gacgtcgggt tgcgctcgca gcacgaactt gtcgccgcgc ttctcgacgt cgtcctccga
      421 tacgcgctcg ccgttcacgc tgaactcgag ctcgcccagg atgattccct ggtgcacgag
      481 cttcttgaag ggctcgggcg tcgagacgat gccggcgtcg tagagcaccc tgtgccagaa
      541 ccgcgcgtag agcaggtgca gcacgccgtg ctcggcgccg ccgacataga ggtcgacggg
      601 ctgccagtac ttctcgagct cggggtcgac gagcgccgtc ggattcttgg gatcgatgaa
      661 gcgcaagtag taccagcatg agcccgccca ctgcggcatc gtgttcgtct cgcgccgcgc
      721 ctttttgccg gtcttcggat cgacgacctc gagccacgcg ccggccttcg ctagcgggcc
      781 ttcgggcgag ccgctcggct tgaagtcgtc gagctcgggc agcagcaccg gcagctcgtc
      841 gtcggtcacc gtctgcggct tgccgtcgac gaacacgatc gggaacggct cgccccagta
      901 gcgctggcgc gagaacagcc agtcgcggag cttgtaattc acgcggcgct cgcctttgcg
      961 ttcgcgctcg agccagtcga tcatcgcggc cttcgcgtcc gcgacgttct tgccgttcaa
     1021 aaagccgctg ttgattgcga cgccgtcgcc gagccaggcg ctgttgccgt cgaagtcggc
     1081 cggcggttgc acggtgcgga tcacgggcag accgaacttg gccgcgaact cgaagtcccg
     1141 ttggtcttgc gcgggcacgg ccatgattgc gccggtgccg tagccggcga gcacgtagtc
     1201 ggcgatccag atcgggatct ctttgccggt ggccgggttc aaggcgtacg cgcccgtgaa
     1261 gacacccgtc ttgtcctttt gcagctcggt gcgctcgagc tcgctcttgc gcgatgccgc
     1321 ttcgcgatag gcgtcgacgg ccgcgcgctg cgcggcggtc gtgagcttcg cgacgagcgt
     1381 gtgctcgggc gcgagcacca tgtacgtcgc gccgaataac gtgtcgggcc gcgtcgtgaa
     1441 cacacgcagc gccacgcccg cgtggcccgc gaccgtgaaa tcgatctcgg ccccctcgct
     1501 gcggccgatc cagttgcgct gcatttcttt cgtgctgttc ggccagtcga ggtcctcgag
     1561 gccgtcgagc aacgcgtccg cgtaggccgt gatcttcagc acccactggc gcagcggccg
     1621 gcgcacgcag gggaagccgc cgacctcgga cttgccgtcg atgacttctt cgttcgcgag
     1681 cgtggtgccg agctcggggc accaccacac gggcagctct tcttggtagg cgagacctcg
     1741 ctcgaacagc tgcttgaaga tccactgcgt ccacttgtag tacgcggggt cggtcgtgtt
     1801 gacttcgcgc tcccagtcgt acgagaaacc cagcgccttc agctgctcgc ggaaacgctt
     1861 gatgttgcgc tcggtcgtga cgcgcggatg cgtgcccgtg cggaccgcgt actgctcggc
     1921 cggcaggccg aatgcgtccc agcccatcgg gtgcagaacg ttgaagccgc gcatgcgctt
     1981 gtagcgcgcg acgatgtccg tcgccgtgta gccctcgggg tgccccacat ggaggccgtc
     2041 gcccgacgga tacgggaaca tgtcgagcgc gtaatacttc ggcttcgacg tatcgatgtt
     2101 cgcgggcgtg cggaacgtgg ccttggcctc ccaatgggct tgccatttcg actcgatttg
     2161 cttgaacgga tacgccatac cgcggtgtaa gctattaacg cgcggtacta ttctgccacg
     2221 agcgacggat cgagtgcttc aaatgcaaca gctcttctca cggccaggct gcaaacgtag
     2281 cgcgcgcgca tcgcttgggc tcagcttcgt gctcggcctc acggggtgcg ggttccacct
     2341 gcaaggcgcc gggacgctgc cgtcgtcgat gacgcggacc ttcgtcgaga ccgaggagcc
     2401 gcactcggaa ttcatggtca gcttgaccga cgtgttgcgc cagcgcggcg ccgaggtgct
     2461 cgccgcgccc gaggccgggg ctgccgtgct cgacatcagc ctcgacgata ccgggcagcg
     2521 ggttctgtcg gtgtcgtcgc gcaatatccc tcgcgagtac gaggtctact acacgatcac
     2581 gttctcgctg agcgtcggcg ccgagagcct gattcaacgc gagtcgctgg tcgccacg
//
LOCUS       DATCUD010000586         1925 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_19999, whole genome shotgun sequence.
ACCESSION   DATCUD010000586 DATCUD010000000
VERSION     DATCUD010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19999"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(140..886)
                     /locus_tag="VIQ99_08555"
     CDS             complement(140..886)
                     /locus_tag="VIQ99_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011542071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEY9183236.1"
                     /translation="MKKDSDENAARGASRREFVATTAAAVGAVLTAASPAGAQERAAA
                     VPVRAESFAQAHQPKPLPFNSASLSGLSQRLIDSHWSNNYSGSVRALNETKRRLAEAF
                     ADRDLPAYIYNDLKREHAMRTGSVVLHELYFENLGGNGRADAAAQRLLAAGFGEFARW
                     EAEFRRVANGLGGGSGWVVLGYNDQFGTLENYWMADHMHNPAATTPLLVMDMYEHSYH
                     MDFGAAAGQYVDAFFNNIDWERVLARFEAL"
     gene            complement(883..1533)
                     /locus_tag="VIQ99_08560"
     CDS             complement(883..1533)
                     /locus_tag="VIQ99_08560"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY9183237.1"
                     /translation="MHLVMFDIDGTLYADAVREVTGVVLDQRWGRYEHVSDSGILEQV
                     LRDSWFDRDRDALAARVQELFVGRVREHLERAAETVREIAGAKRLIERLRALPNVRIA
                     IATGGWEPTALLKLAHVGIDVGALGFASSSDARARTDIMRLAAERALRGAALTRGTYF
                     GDGPWDRAASAEFGYDFVAVGRGVSNAVAYDDFGDTAEILAQLGVLPDAGKRGNPS"
     gene            complement(1534..>1925)
                     /locus_tag="VIQ99_08565"
     CDS             complement(1534..>1925)
                     /locus_tag="VIQ99_08565"
                     /inference="COORDINATES: protein motif:HMM:NF024110.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183238.1"
                     /translation="FLIAFFTLGSLMMAAGAAVNDMREAQQLMMPMSILLMLPWILWM
                     PISRNPDSMLAIVASLVPPLNTFGMLLRLSSTSPPPAWQVWLSIAIGVAGVFATVWFS
                     AKVFRIGLLMFGKPPDFKTLVKWARAA"
BASE COUNT          336 a          687 c          607 g          295 t
ORIGIN      
        1 ggccgcatgg cgaaggagcc tgtcacggcc tcggctcaag ctcgcgctcc acgagctcga
       61 accgcggaac gacacactga atcgttcgcc gtcgaacacg acgccgagcg tgctccatcg
      121 tcgagccccc ttcgaatcgc tacagcgctt cgaaacgtgc gagaacgcgc tcccagtcga
      181 tgttgttgaa gaaggcatcg acgtactgtc cggccgccgc gccgaaatcc atgtgatacg
      241 agtgctcgta catgtccatc acgagcagcg gcgtcgtggc cgccggattg tgcatgtgat
      301 cggccatcca gtagttctcg agcgtcccga actgatcgtt gtagccgagc accacccagc
      361 cggagccgcc gccgagcccg ttcgcgacgc gccgaaactc ggcctcccag cgcgcgaact
      421 cgccgaatcc ggccgcgagc agacgctgcg cggctgcgtc cgcgcggccg ttgcccccga
      481 ggttctcgaa gtacagctcg tgcaacacga cggagccggt ccgcatcgcg tgctcgcgct
      541 tcaagtcgtt gtagatgtac gccggcaggt ctcggtctgc gaacgcctcg gcgaggcgcc
      601 gcttcgtttc gttcaatgcc cgcacggagc cgctgtagtt gttcgaccag tgcgagtcga
      661 tcagccgctg cgacaggccg ctcagcgacg cggaattgaa cggcagcggc ttcggctgat
      721 gagcctgcgc gaacgactcg gcgcgcacgg gcaccgcggc ggcccgttcc tgcgccccgg
      781 ccggcgacgc ggcggtgagc acggcaccga cggcggcagc ggtcgtcgca acgaactcgc
      841 ggcgactcgc gccgcgcgcg gcattttcgt cagaatcttt tttcatgatg gattccccct
      901 ctttccagcg tccggaagca cacccagctg cgcaagtatc tctgcagtat cgccgaagtc
      961 gtcgtaggcg acagcattgg agacgccccg accgacggcc acgaaatcgt agccgaactc
     1021 ggcgcttgcg gcgcggtccc atggcccgtc gccgaagtac gtcccgcgcg tgagcgccgc
     1081 gccgcgcagt gcgcgctccg cggccaagcg catgatgtcc gtgcgcgccc gcgcgtcgga
     1141 gctgctcgcg aacccgagcg cgcccacgtc gatgccgacg tgcgcgagct tcaggagcgc
     1201 cgtcggctcc cagccgcccg ttgcgatcgc gatgcggacg ttcggcagtg cgcgcagccg
     1261 ctcgatcaga cgcttcgcgc ccgcgatctc gcgcacagtc tccgctgcgc gctccaggtg
     1321 ctcgcgaacg cgcccgacga acagttcctg cacgcgcgcc gcaagcgcgt cgcggtcgcg
     1381 atcgaaccac gaatcgcgca ggacctgctc gaggatgccg ctatcgctga cgtgctcgta
     1441 ccggccccac cgctgatcga gcacgacgcc ggtcacctcg cgcacagcgt ccgcgtacag
     1501 cgtgccgtcg atgtcgaaca tgacgaggtg catctacgcc gcgcgcgccc acttcacgag
     1561 tgtcttgaag tccggcggct tgccgaacat caggaggccg atccggaaca ctttcgccga
     1621 gaaccacacg gtcgcgaaca cgcccgcaac gccgatcgcg atcgacaacc acacctgcca
     1681 tgcgggcggc gggctggtcg atgacagccg cagcagcatc ccgaacgtgt tcagcggcgg
     1741 cacgaggctc gcgacgatcg cgagcatcga atccgggttc cgcgagatcg gcatccagag
     1801 gatccacggc agcatcaaca ggatcgacat cggcatcatg agctgctgcg cttccctcat
     1861 gtcgttgacg gcggcgcccg ccgccatcat cagcgagccg agcgtgaaga acgcgatcaa
     1921 gaaaa
//
LOCUS       DATCUD010000587         1868 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_6139, whole genome shotgun sequence.
ACCESSION   DATCUD010000587 DATCUD010000000
VERSION     DATCUD010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6139"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VIQ99_08570"
     CDS             complement(<1..279)
                     /locus_tag="VIQ99_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005361160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEY9183239.1"
                     /translation="MEWITSPEAWIALTTLTLLEIVLGVDNIIFISILVARLPPEQRQ
                     RARVLGLGFAMGTRILLLLLLTWIMRLQNSLFTVMDVGISGRDLILIGG"
     gene            complement(306..1043)
                     /locus_tag="VIQ99_08575"
     CDS             complement(306..1043)
                     /locus_tag="VIQ99_08575"
                     /inference="COORDINATES: protein motif:HMM:NF024498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEY9183240.1"
                     /translation="MQTNRILATLTVLPFAAFAFGASAQALTKEELASRLNGISVEDI
                     SDSPIKGIYQVAVGANVAYVTSDGRYIIRGDIYDADTSANVSEETRAAARVAMLESVD
                     PESMIVFKPANGNVKHTIHIFTDIDCGYCRQFHREIDKVTALGIEVHYLFYPRTGPNT
                     ESWSKADQVWCAPNHNQALTRAKLGGEIPEGPSCATPVESHYALGQRIGVRGTPAVFS
                     ETGELIGGYLPPADLAKILDDPDAVLE"
     gene            complement(1133..>1868)
                     /gene="xerD"
                     /locus_tag="VIQ99_08580"
     CDS             complement(1133..>1868)
                     /gene="xerD"
                     /locus_tag="VIQ99_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEY9183241.1"
                     /translation="DVLDYIAWRVEAGAKPRSTARQLSSFRRFYRYLLREGLLSEDPT
                     AQIAMPKIGRALPQSLTEEEVEALLAAPVVAEPLGHRDRAMLEVLYATGVRVSELINL
                     KMSQVNLNQGVLRIVGKGDRERLIPLGDEAQDWVKEFVGGPRVEILLERQTEYLFPTR
                     RGDRMTRQAFWHIIKRYARKAGVKKKLSPHTVRHAFATHLLNNGADLRVVQLLLGHSD
                     VSTTQIYTHVARERMKELHSRHHPRG"
BASE COUNT          354 a          587 c          585 g          342 t
ORIGIN      
        1 gccgccgatc aagatcagat cgcgcccgga aatcccgacg tccatgaccg tgaacagcga
       61 gttctgcaac cgcatgatcc acgtcagcag cagtagcagc agaatgcgcg tgcccatcgc
      121 gaagcccagg cccagcacgc gagcacgctg gcgctgctcc ggaggtaaac gcgcgacgag
      181 aatgctgatg aaaatgatgt tgtcgacgcc gagaacgatc tcgagcagcg taagcgtggt
      241 cagggcaatc cacgcctcgg gtgaggtaat ccactccatc gtcgggcgag cctacgcgaa
      301 gcggattatt cgaggacggc gtcgggatcg tcgaggatct ttgctagatc cgcgggcggc
      361 aagtagccgc cgatcagctc accggtctcg gagaacacgg ccggagtgcc gcgcacgccg
      421 atgcgctgac ccagcgcgta gtgcgactcg accggagtcg cgcaactcgg cccctcggga
      481 atctcgccac ccagcttcgc gcgcgtcagc gcctgattgt gattcggcgc gcaccagacc
      541 tgatcggcct tcgaccacga ttcggtgttc ggccctgtcc gcggataaaa caggtaatga
      601 acctcgatgc cgagcgccgt gaccttgtcg atctcgcgat ggaattgacg gcagtagccg
      661 cagtcgatgt cggtaaagat atggatcgtg tgcttcacgt tgccgttcgc cggcttgaac
      721 acgatcatgc tctcggggtc gaccgactcg agcatcgcga cacgcgcagc cgcacgcgtt
      781 tcctccgaca cgttggcgct cgtatcggcg tcgtagatgt cgccgcgaat gatgtatcgc
      841 ccatcgctcg tcacgtaggc gacgttagcg ccgacggcga cctggtagat gcccttaatc
      901 ggcgagtcgc taatgtcttc gacggagatg ccgttgagcc gactcgcgag ctcttccttc
      961 gtgagggcct gggccgatgc tccgaacgca aacgcagcga acggcaagac cgtcagggtc
     1021 gcgagaatcc ggttcgtttg cacaggcagt ctcctacgtg ggagggctcc acgcttcgag
     1081 ccccaaggat tctaccaata aagaccgcac cgggtagcgg tcccgcttcg cgtcagccgc
     1141 gcggatggtg gcggctgtgc agctctttca tgcgctcgcg cgcgacgtgt gtatagattt
     1201 gtgtagtcga cacgtcgctg tgcccgagca atagctgcac cacccgcagg tctgcaccat
     1261 tgttgagcag atgagtcgcg aacgcgtgcc gaacggtgtg cggcgacagt ttcttcttga
     1321 cgccggcctt gcgggcatag cgcttgatga tgtgccagaa agcctggcgc gtcattcggt
     1381 cgccgcggcg cgtcgggaac agatattcgg tctggcgctc gagcaggatc tcgacgcgcg
     1441 ggccgccgac gaactccttg acccaatctt gcgcctcgtc gccgagcgga atcagacgtt
     1501 cgcgatcgcc cttgccgacg atccggagca cgccttgatt cagattgacc tgactcatct
     1561 tgagattgat cagctccgag acgcgcacgc cggtcgcata cagcacctcg agcatcgcgc
     1621 gatcgcggtg accgagcggc tcggcgacga cgggcgccgc gagcagtgcc tcgacctctt
     1681 cttccgtcaa cgactgcggc agcgcccgac cgatcttcgg catcgcgatc tgcgcggtcg
     1741 gatcttcgct caacaagcct tcgcgaagca gataacgata gaagcgccga aagctggaga
     1801 gttggcgtgc cgtggaacgt ggcttcgcgc cagcctcgac gcgccaagcg atgtagtcga
     1861 gcacgtcg
//
LOCUS       DATCUD010000588         3698 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91098, whole genome shotgun sequence.
ACCESSION   DATCUD010000588 DATCUD010000000
VERSION     DATCUD010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3698
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91098"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2006)
                     /locus_tag="VIQ99_08585"
     CDS             complement(<1..2006)
                     /locus_tag="VIQ99_08585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY9183242.1"
                     /translation="MNSSSLVVAAMAAATLLCCTAGAQTPRRPAEGFIGGTVTSTRGP
                     EAGVWVIAETTELKTPFIKIVVTDEAGRYVLPQLPTATYNVWVRGYGLADSDKVEGRP
                     GDTALDLAAKLASSPAEAAKVYPGNYWFSLLQPPAKSEFPGTGDSGNGIPPAMATQAH
                     WIFNLKSGCNFCHQLGNEITRTLGHMDHLGFKTPEEAWIYRTQLGVRGSSMAGTMAQW
                     GLNAGARVMADWTTRIANGELPPAPPRPRPGPERNVVVTLWDWGVDSSFMHDEIATDK
                     NDPTVNGYGPVYAVSAGHGKLTVLDPVVNDTYELTIPTREDARQVQSRFPPPAMPSNF
                     WGMRHLWGPENPADPHNPMMDRKGRVWMTSKIRNEEPAWCREGSSHRFAQYYPLNFSN
                     RQASYYDPATGEFRLVDTCFATHHLQFDNDPDQTLYFNELLGPIVGWINTREYDRTGD
                     EQATQGWCPQVVDTNGDGKITKPWNRPGEPVDPRRDTEVRHNLYSVIPSPVDNSVWGA
                     SENTPGYIVRVDLGENPPETCMTEVYKVPEPGIDPRGIDVDTNGVVWTALAASSHMAS
                     LDRTKCRVFNGPSVVAGEQCAAGWKLYLSDGPRFKGTDIPADFHYYNWVDQHDIAGFG
                     PNTPIATGSNSDALLVLDPESGEWTTLRVPYPLGFYHRGLDGRI"
     gene            complement(2049..2948)
                     /locus_tag="VIQ99_08590"
     CDS             complement(2049..2948)
                     /locus_tag="VIQ99_08590"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEY9183243.1"
                     /translation="MNRRDALGMIAAATGSMLAAPSFAQTAQSAAAPRIVRKGRIKQG
                     LWRVNFGANTQLTFDDMCREAARLGAYGFDLIDPADWPTLRKHGLEPLLAGAGPVTFQ
                     NGIIHPEVHDQLEKDLKAHIDMVAAEGVKTIITIGGQRRGMSYEQGADNAVAFLNRVK
                     RHLETRGVTLAIENMNNRRLDPNYGREDQIFGRWGWGVGVCERVSSPNVKLVCDLYHL
                     QIMDGDIAQNIRDTIQWIAHFHTAGVPSRNEIDFSQEMNYRYIAEVIADSPFTGYVSH
                     EWRPTPGRDPLRSIAEAIEIMDV"
     gene            3086..>3698
                     /locus_tag="VIQ99_08595"
     CDS             3086..>3698
                     /locus_tag="VIQ99_08595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183244.1"
                     /translation="MMLRTGLGAVAAAAVCTACAGSAFVSSWRAPDASPLQVGGSKVA
                     AVVMMEQVSSRRAAEDALARELTARGAEGVPMYMILPDDDPSDEPAARAALERQGFAG
                     VVVLRPVDTQQEIVATPVYTGPYYSMYWGGYYGYGWGMPWGVGVAGAEIRTNTIVSVE
                     TLVYSLRQNMLVWGGQSTTTNPSSVDRLVHDTARKVAKELQQQG"
BASE COUNT          585 a         1197 c         1238 g          678 t
ORIGIN      
        1 tcgatgcgcc catcgagccc gcggtggtag aagccgagcg ggtacggcac ccgcaacgtc
       61 gtccattctc ccgattccgg atcgagcacc agcaacgcat cggagttgct acccgtggcg
      121 atcggcgtgt tcggcccgaa gcccgcgatg tcgtgctgat cgacccagtt gtagtagtgg
      181 aagtcggcgg ggatgtcggt gcctttgaac cgcggaccgt cggacaagta cagcttccaa
      241 ccggccgcgc attgttcgcc ggccacgacg ctcgggccgt tgaagacgcg gcacttcgtg
      301 cggtcgaggc tcgccatgtg gctgctcgcc gcgagcgccg tccagaccac gccgttcgtg
      361 tcgacgtcga tgccgcgcgg atcgatgccg ggctccggca ccttgtagac ctcggtcatg
      421 cacgtctcgg gcgggttctc gccgagatca acgcgcacga tatagcccgg cgtgttctcc
      481 gacgcgcccc acaccgagtt gtcgaccggg ctcgggatca ccgagtacag attgtggcgc
      541 acctccgtat cacggcgcgg atcgacgggc tcgccggggc ggttccacgg cttcgtgatc
      601 ttgccgtcgc cgttggtgtc gacgacttgc gggcaccagc cctgagtcgc ctgttcgtcg
      661 cccgtgcgat cgtactcacg cgtgttgatc cagccgacga tcggccccaa aagctcgttg
      721 aagtacagcg tctgatcggg gtcgttgtcg aattgcagat ggtgcgtcgc gaagcacgtg
      781 tcgacgagcc ggaactcgcc cgtcgccgga tcgtagtacg acgcctggcg attgctgaaa
      841 ttcagcgggt agtactgcgc gaagcggtgg ctcgagcctt cacgacacca cgccggttcc
      901 tcgttgcgga tcttcgacgt catccagacg cggcctttgc gatccatcat cgggttgtgc
      961 ggatcggccg ggttctcggg gccccacaga tgccgcatgc cccagaagtt cgacggcatc
     1021 gccggcggcg ggaaacgcga ctgcacttgg cgcgcgtcct cgcgcgtcgg aatcgtgagc
     1081 tcgtaagtgt cgttcacgac cggatcgagc accgtgagct tgccgtggcc cgccgagacc
     1141 gcgtacacgg ggccgtagcc attcacggta ggatcgttct tgtcggtcgc gatctcgtcg
     1201 tgcatgaacg acgaatcgac gccccaatcc cacaaggtca cgacgacgtt gcgctcgggc
     1261 ccggggcgcg gccgcggcgg cgcgggcggc agctcgccgt tcgcgatccg cgtagtccag
     1321 tccgccatga cgcgcgcgcc ggcgttcagg ccccactgtg ccatcgtgcc ggccatcgag
     1381 ctgccgcgca cgccgagctg cgtgcgatag atccacgcct cctccggcgt cttgaacccc
     1441 aaatggtcca tgtggccgag cgtgcgcgtg atctcgttgc cgagctggtg gcagaagttg
     1501 cagccgctct tcaagttgaa gatccaatga gcctgggtcg ccatggccgg cgggatgcca
     1561 ttaccgctgt cgccggtgcc cggaaactcg ctcttggccg gcggctgcag caacgaaaac
     1621 caatagttac cgggatagac cttggcggcc tcggccggcg aggacgcgag cttcgcggcc
     1681 aggtccaacg ccgtgtcgcc gggccgtccc tcgaccttgt cggaatcggc caggccgtag
     1741 ccgcgtaccc agacgttgta cgtcgcggtc ggcaactgcg gcagcacata gcggccggct
     1801 tcgtcggtca cgacgatctt gatgaacggc gtcttgagct cggtcgtctc cgcgatgacc
     1861 catacgccgg cctccgggcc gcgagtgctc gtgacggtgc cgccgatgaa gccctccgcg
     1921 ggacggcgcg gcgtctgcgc gccggccgtg cagcacagca aggttgcggc ggccatcgcg
     1981 gcgacaacga gactcgagct gttcatgaat atcccctgat gaaaagcgtt ggaaccttgc
     2041 ctgcaatctc aaacgtccat gatctcgatt gcttcggcga tgctgcgtag cgggtcgcgg
     2101 cccggcgtgg gccgccactc gtggctcacg tagccggtga acggcgagtc ggcaatgact
     2161 tccgcaatgt agcggtagtt catctcttgg ctgaagtcga tctcgttgcg cgacggcacg
     2221 ccggcggtgt ggaagtgcgc gatccactgg atcgtgtcgc gaatgttctg cgcgatgtcg
     2281 ccatccatga tctggaggtg atagaggtcg cagacgagct tcacgttcgg cgagctcacg
     2341 cgctcgcaga cgcccactcc ccaaccccaa cggccgaaga tctgatcctc gcggccgtag
     2401 ttgggatcga ggcgccgatt gttcatgttt tcgatcgcga gcgtgacgcc gcgagtctcg
     2461 aggtggcgtt tgacgcggtt caagaacgcg accgcgttgt cggcgccctg ctcgtacgac
     2521 atgccgcgac gctggccgcc gatcgtgatg atcgtcttca caccctccgc ggcgaccatg
     2581 tcgatgtgcg ccttgagatc tttctccagc tggtcgtgga cctctggatg aatgatgccg
     2641 ttctgaaacg tgaccggacc cgcgcccgcg agcaatggct cgaggccgtg cttgcgcagc
     2701 gtgggccagt cggcggggtc gatgaggtcg aagccgtagg cgccgaggcg cgcggcctcg
     2761 cggcacatgt cgtcgaacgt gagctgcgtg ttagcgccga agttcacgcg ccacaggccc
     2821 tgcttgatgc ggcctttgcg tacgatcctc ggcgcggccg ccgactgagc cgtttgcgcg
     2881 aatgacggcg ccgcgagcat cgagcccgtg gccgccgcga tcatgccgag cgcgtctcgt
     2941 ctattcatcg cgtcaccccc tgccaacgcc gcacatctta tgccggcggc cgagaccggc
     3001 aaagtcgtgc aatacgggtt tctgcggatg ccggcgcagc aacgcgactc gtagcatggc
     3061 tttttgaggt cgtgtggaga agctcatgat gttacgcacc ggtctcggcg ccgtcgcggc
     3121 ggctgccgtt tgcacagcct gcgcaggcag cgccttcgtg tcgtcgtggc gtgccccgga
     3181 tgccagcccg ctacaggtcg gcggctcgaa ggtcgcggcc gtcgtgatga tggagcaggt
     3241 gtcgtcgcga cgggccgccg aggatgctct cgcgcgggag ctcacggctc gcggagccga
     3301 gggcgttccg atgtacatga tcctccccga tgacgatccc tcggacgagc cggcagcgcg
     3361 tgcggccctc gagcgccaag gattcgccgg ggtggtcgtg ctgcgacccg tcgacacgca
     3421 gcaggagatc gtggcgacgc ccgtgtacac ggggccgtac tactccatgt actggggagg
     3481 ttattacggc tacggatggg gaatgccctg gggcgtaggc gtcgcgggcg ccgagattcg
     3541 caccaacacg atcgtctcgg tcgagacgct cgtctactcg ctgcggcaaa acatgctggt
     3601 gtggggcggc cagagcacca cgaccaatcc gtccagtgtc gaccgcctgg tccacgatac
     3661 ggctcgcaag gtcgccaagg aattacagca gcaggggt
//
LOCUS       DATCUD010000589         1674 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77024, whole genome shotgun sequence.
ACCESSION   DATCUD010000589 DATCUD010000000
VERSION     DATCUD010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1674
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77024"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1535)
                     /locus_tag="VIQ99_08600"
     CDS             complement(<1..1535)
                     /locus_tag="VIQ99_08600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183245.1"
                     /translation="MALRYGSTSTRVALATGLATVVWVVAYAQFGGPPPQVYTPAEGA
                     KDLKSVLFNWPWHMGMLRGIEEHELAVTLEYRGEGTIQINGQPCTITPYKEARPGELG
                     TSGYRISNAYQFAGSRTQIECTLPNGRTYSNIEVVSGEHAWDEDRPGAGLVPGEGTAT
                     PQREKVDERLIRLWAGPQGAAKAALAGAGIDPMKVFRNPGGLLEEGTSKIGDTSVTWD
                     GDTPVVTFPIPGVIGATAVARLDDRFMTESVVVTHGRDRYEFAYSDYNDYNNPLNLIE
                     VYMPGRMIERRNGEVVRDVNTVVTETGSVYVVVPVPPSVGPTQPLPMYGSDQKPPVLD
                     SNAPTPRLAGGKPDLTGSWRTDGNKFFIWRYGNRRCAPTQLDGCSPQWNQTVDFEFEA
                     ASRFGPNRPIYKPEHWDKVIYLDMWTNREDPIMTCQPMGIPRQGPPGRIFHTEDDITL
                     LYGRGGDGGGGYSDFRVIATDGRPFDEQQTRQTKYTGHSVGRWEGDTLVIESVGFTPE
                     TWLA"
BASE COUNT          260 a          528 c          541 g          345 t
ORIGIN      
        1 gcgagccacg tctccggcgt gaatccaacc gactcgatca cgagcgtgtc gccctcccag
       61 cggccgacgg aatgacccgt gtatttggtt tggcgggtct gctgctcgtc gaacggtcgc
      121 ccgtcggtcg cgatcacgcg gaagtcggaa taaccgccgc cgccgtcgcc gccgcggcca
      181 tagagcaggg tgatgtcgtc ttcggtgtgg aagatgcgcc cgggcggtcc ttgtctcgga
      241 atacccatcg gctgacaagt catgatcgga tcttcgcggt tcgtccacat gtcgagatag
      301 atgactttgt cccagtgctc gggtttgtag atcgggcgat tcggcccgaa gcgcgaggcc
      361 gcctcgaact cgaaatcgac tgtttgattc cactgcggac tgcagccgtc gagctgcgtc
      421 ggtgcgcacc ggcggttgcc gtaacgccag atgaaaaact tgttgccgtc ggttctccag
      481 ctaccggtga ggtcgggctt gccgccggcc aaacgcggcg tcggggcgtt ggaatcgagc
      541 accggcggct tctggtcgct cccatacatc ggcaggggct gagtggggcc cacgctcggg
      601 ggcacgggca cgaccacgta gacactgccc gtttccgtca cgaccgtgtt cacgtcgcgc
      661 acgacctcgc cgttacggcg ctcgatcatc ctgccgggca tatagacttc gatcagattc
      721 agcggattgt tgtagtcgtt gtagtcgctg tacgcgaact cgtaccgatc gcgcccgtgc
      781 gtgacgacga cggattcggt catgaagcga tcgtcgagcc tcgcaaccgc cgttgcgccg
      841 atgacgcccg gaatcggaaa cgtgacgacc ggtgtgtccc cgtcccaggt gacggacgtg
      901 tcgccgattt tcgacgtgcc ttcctcgagc agcccgccgg gattgcggaa cactttcatc
      961 gggtcgattc cggcgcccgc cagagccgct ttggcagcgc cctgagggcc ggcccagaga
     1021 cggatcaggc gctcatcgac cttctcgcgc tgcggcgtgg ccgtgccttc gcccggcacg
     1081 agaccggcgc ccggtctgtc ttcgtcccag gcgtgctcgc cgctgacgac ctcgatgttg
     1141 gagtacgtcc ggccgttcgg cagcgtgcat tcgatctgcg tgcggctgcc ggcaaattgg
     1201 tacgcgttgc tgatgcggta tcccgacgtg ccgagctcgc cgggtcgggc ttccttgtag
     1261 ggcgtgatcg tgcaaggttg gccgtttatt tggatcgtcc cttcaccgcg atactcgagc
     1321 gtgaccgcga gctcgtgctc ctcgatgccg cgcaacatgc ccatgtgcca cggccagttg
     1381 aacagcacgg acttcagatc tttggcgcct tccgcgggcg tgtagacttg cggcgggggt
     1441 ccgccgaact gtgcatacgc cacgacccac acgacggtcg cgaggccggt tgcgagcgcg
     1501 acgcgcgtcg aggtcgagcc atatctcaag gccatggtca ttccccctaa ctctggatgc
     1561 tgctgttatt cgggttggaa ttcgatcgtc ttcgcgttcg gcagcgtaat ggttcggatg
     1621 aatccgagtg gcttgccgtt tcgcgccggg aaatagccga tcgtcacgac atcg
//
LOCUS       DATCUD010000590         1802 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20042, whole genome shotgun sequence.
ACCESSION   DATCUD010000590 DATCUD010000000
VERSION     DATCUD010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20042"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..859
                     /locus_tag="VIQ99_08605"
     CDS             <1..859
                     /locus_tag="VIQ99_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017841488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY9183246.1"
                     /translation="TVWVLAVVAAARPQFVGEPVALPMTGRDLLLSVDLSGSMEEQDF
                     QLNGQWVDRLTATKAVATEFIERRVGDRVGLILFGREAYLQAPLTFDRATVATLLDES
                     VIGLAGKETAIGDSIGLAIRTLDDAGVEQGRRVLILLTDGANTAGQVEPRKAAELAAQ
                     RNLVIYTIGIGADALTVRSLFGLRQINPSADLDEETLTAIAEMTGGRYFRARDTAEFA
                     EIYTILDELEPAESDERGFRPVTELYHWPLGAALLLTVAAALVAFAATRWRWSHTAVR
                     RWQRGLDHG"
     gene            852..>1802
                     /locus_tag="VIQ99_08610"
     CDS             852..>1802
                     /locus_tag="VIQ99_08610"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY9183247.1"
                     /translation="MAEFHFLRPLWFVLLPVGAWLIWQLLRGRADEGGWRRVVDAKLR
                     SHVLVEPEVLRDSRIALIAALVAWLIAIAALAGPTWERLPVPAFRSDEALVVALDLSR
                     SMDAADVEPSRLARAKLKLLDLLERRAAGQTALVVFSTHAFTVTPLTTDTRTIASLVN
                     AVNTDIMPTPGGSIAAGLDKAAALLRQTGLSRGDILLITDSEVSDAELDLARELAGDG
                     LLVSVLAVGTEQGAPIPQAEGGFVNDDSGQVVVPQVDPGRLQRLASRGGGRFARLTPN
                     DRDLETLFPSTTALPLDVALADSGEDYQADVWRDRGVWLAV"
BASE COUNT          244 a          605 c          655 g          298 t
ORIGIN      
        1 gacggtctgg gtgctcgcgg tggtcgcggc cgcgcggccg cagttcgtcg gcgagccggt
       61 cgcgctgccg atgacgggcc gcgacttgct gctgtccgtg gacctctcgg gcagcatgga
      121 agagcaggac tttcagctga acgggcagtg ggtcgaccgg ctcacggcca cgaaggccgt
      181 cgcgaccgag ttcatcgagc ggcgcgtcgg cgatcgggtc ggcctgatcc tgttcgggcg
      241 tgaagcctat ctccaggcgc cgctgacgtt cgaccgtgcg acggtcgcga cactgctcga
      301 cgagtccgtg atcggtctcg ccggcaagga aacggcgatc ggcgattcga tcgggctcgc
      361 gatccgcacg ctcgacgacg ccggcgtcga gcagggccgc cgcgtgctga tcctgctcac
      421 ggacggcgcg aacacggccg gccaggtcga gccgcggaag gcggccgagc tcgcggcgca
      481 gcgcaacctc gtgatctaca cgatcggcat cggcgccgac gcgctgaccg tccgctcgct
      541 gttcggcttg cggcagatca atccatcggc ggatctcgac gaggagacgt tgacggcgat
      601 cgccgagatg acgggcggcc ggtatttccg cgcgcgggac acggccgagt tcgcggagat
      661 ctacacgatt ctcgacgagc tcgagccggc cgagtccgac gagcgcgggt tccggcccgt
      721 gaccgagctt tatcactggc cactcggcgc ggcgctgttg ctcaccgtcg cggccgcgct
      781 cgtcgcgttc gcggcgacgc gctggcgctg gtcgcacacg gcggttcgac gttggcagcg
      841 tgggctcgat catggctgag ttccacttct tgcggccact ctggttcgtg ttgttgcccg
      901 tgggcgcgtg gctgatatgg cagctgctgc gcggccgcgc cgatgagggc gggtggcgac
      961 gcgtcgtcga tgcgaagttg cgcagccatg tgctcgtcga gcccgaggtg ctgcgcgaca
     1021 gccggatcgc gctgatcgcg gcgctcgtcg cctggctcat tgccatcgcc gcgctcgcgg
     1081 gtccgacctg ggaacggctg ccggtgcccg cgtttcgctc cgacgaggcg ctcgtcgtgg
     1141 cgctcgattt gtcgcgctcg atggacgccg cggacgtgga gccgtcgcgg ctcgcgcgcg
     1201 cgaagctgaa gctgctcgac ctgctcgaac ggcgagccgc ggggcaaacc gcgctcgtcg
     1261 tgttctcgac gcatgcgttc acggtgacgc cgctgacgac cgacacgcgg acgatcgcgt
     1321 cgctcgtgaa cgccgtgaac acggacatca tgccgacgcc gggcggctcg atcgccgcgg
     1381 gtctcgacaa ggccgcggcg ttgctgcgtc agaccggttt gagtcgcggc gacattcttc
     1441 tgattacgga ctccgaggtc tcggacgccg agctcgacct cgcgcgcgag cttgccggcg
     1501 acgggttgct cgtcagcgtg ctcgcggtcg gcaccgagca gggcgcaccg atcccgcaag
     1561 ccgaaggcgg cttcgtcaac gacgattcgg gccaggtcgt cgtgccgcaa gtggatccgg
     1621 gccgtctgca acggctcgcc tcgagaggcg gcggccgctt cgcgcgactg acgccgaacg
     1681 accgcgacct cgagactttg ttcccatcga cgaccgcgct gccgctcgac gtcgcgctcg
     1741 cggatagcgg agaagactac caagccgacg tttggcgcga ccgcggcgtg tggctcgcgg
     1801 tc
//
LOCUS       DATCUD010000591         2549 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48416, whole genome shotgun sequence.
ACCESSION   DATCUD010000591 DATCUD010000000
VERSION     DATCUD010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2549
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48416"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            95..559
                     /gene="trxA"
                     /locus_tag="VIQ99_08615"
     CDS             95..559
                     /gene="trxA"
                     /locus_tag="VIQ99_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012176059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY9183248.1"
                     /translation="MSDSLLIACGNCGATNRVPAAKLAAGSRPICGRCKQPLPATTAA
                     TPLTVTDATFAAEVERSPLPVLVDAWAPWCGPCRAIAPAIEQLAAELAGRVRVAKLNV
                     DENPATASRFDVRSIPTMLVMVAGREVDRIVGAQPKAAIKQRLERVVATTAR"
     gene            complement(546..1331)
                     /gene="murI"
                     /locus_tag="VIQ99_08620"
     CDS             complement(546..1331)
                     /gene="murI"
                     /locus_tag="VIQ99_08620"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012702649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEY9183249.1"
                     /translation="MTTAAPAIGVFDSGVGGLSVLKHIRAQLPRPRLLYVADSGHVPY
                     GDKTPEHIRERALFLTSFLIEQGAVSVVIACNTATAAAAAMLRARFEIPIIGMEPAVK
                     PAVAATRSGVVGVLATVGTLESAKFAALLEQYAGDVEIVTQACPGLVEQVEAGELDTS
                     KTRALLERYTTPLLARGADTLVLGCTHYAFLRAQIAGLVGSAVTLIDTGDAVAKQVAR
                     RLPPAAAVGGGAPEERFWTTGDLGAARRIVGQLWGGTVSVNAL"
     gene            complement(1395..1469)
                     /locus_tag="VIQ99_08625"
     tRNA            complement(1395..1469)
                     /locus_tag="VIQ99_08625"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1435..1437),aa:Thr,seq:tgt)
     gene            1610..>2549
                     /locus_tag="VIQ99_08630"
     CDS             1610..>2549
                     /locus_tag="VIQ99_08630"
                     /inference="COORDINATES: protein motif:HMM:NF017893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane CreD family protein"
                     /protein_id="HEY9183250.1"
                     /translation="MRDHLHTLQASVTGKVLFIGALTLLLLIPLGMIRGLIEERTQLY
                     DTARADIASSWGQPQTLGGPVLVVPFEYTRWINGEPKIYADELYALPEQLDVTGNVDA
                     EERRRGIYRVPVYTTRLRITGRFPAIALGSEYSDLKILWEQTQIALPLTDARSVTEPI
                     VLASGNGTTTFEASGGRVAGFGPQLVAPYAALGLGALTAPQAFSFELALGGTGALHFL
                     PLGDETHVAITSDWASPSFVGAFLPGDRTVDAGGFTAEWRVLDLGRGYPSSWKRSEPP
                     QAVATSAFGAELITPVGIHEATTRAAKYAVLIIGLTF"
BASE COUNT          413 a          874 c          863 g          399 t
ORIGIN      
        1 tcgagggggt catggtcgca attatcacac agggccccgg cttgacgttc ggtggggcgg
       61 gccccatgtc gaggcttccg acagcgaggt tcccatgtcc gattccctgc tgattgcgtg
      121 cggaaactgc ggcgcgacga acagagtccc ggccgcgaag ctcgcggccg ggtcgagacc
      181 catctgcggc cggtgcaagc agccgttgcc ggcgacgacc gccgcgacgc ccttaaccgt
      241 gacggacgct acgttcgccg ccgaggtcga gcgttcgcct ctgcccgtcc tcgtcgatgc
      301 ctgggcgccg tggtgcggac cctgccgcgc gatcgcaccc gcgatcgagc aactggccgc
      361 agagctcgcc ggccgcgtcc gcgtcgcgaa gctcaacgtc gacgaaaatc cggcgaccgc
      421 cagtcgcttc gacgtgcgca gcattccgac gatgctcgtg atggtcgctg gccgcgaagt
      481 ggaccgaatc gtcggcgcgc aaccgaaggc cgcgatcaag cagcgcctcg agcgcgttgt
      541 agctactaca gcgcgttgac ggacaccgtt ccgccccata gctggccgac gatgcggcgc
      601 gcggcgccga gatcgccggt cgtccagaag cgctcctcgg gagccccgcc accgaccgcc
      661 gcggctggcg gcaaacgtcg cgcgacttgc ttggcgacgg cgtcgccggt gtcgatcaac
      721 gtgacggccg agccgacgag ccccgcgatc tgcgccctca ggaatgcgta atgcgtgcaa
      781 ccgagcacga gcgtgtcggc gccgcgcgcc aggagcggcg tcgtataacg ctcgagcagc
      841 gcacgtgtct tcgaggtgtc gagctcaccg gcctcgactt gctcgaccag gcctgggcaa
      901 gcctgggtga cgatctcgac gtcgccggca tactgctcga gcagcgccgc gaactttgcg
      961 ctctcgagcg tgccgaccgt cgccaacacg ccgacgacgc cactccgcgt cgccgcaacc
     1021 gcgggcttca cggccggctc catgccgatg atcggaatct cgaagcgcgc gcgcagcatg
     1081 gctgcggcgg cggccgtggc ggtgttgcac gcgatcacga cggacacggc accctgctcg
     1141 atcaggaagc tcgtcaggaa cagcgcgcgc tcgcgaatgt gctccggtgt cttgtcgccg
     1201 tacggcacgt gaccggagtc ggcgacgtac aacaggcgcg ggcgcggcaa ctgcgcgcgg
     1261 atgtgcttga gcaccgagag gccgccgacg cccgagtcga acacaccgat tgcgggcgct
     1321 gccgttgtca tcgggatgcg actctagcag ctcgcggcgg gttcggcgca gacgagcgcc
     1381 gctcgcggga aaattggtgc cggtggagag gatcgaactc ccgaccttcg gtttacaaaa
     1441 ccgctgcact accgctgtgc tacaccggct cggccgggcg tgacgcgcgc cgggccggcg
     1501 gcattatagc ccgcttgcgc gcggtcagaa ttcgtcagaa tcccgccgcc ggccggccag
     1561 aatcgccgcc gacaatcctc ccacgtaagg acgctacggg aggtagtgaa tgcgcgatca
     1621 cctgcacacg ttgcaagcct ccgtgacggg caaagtgctg ttcatcggcg ccctgacgct
     1681 gttgctgttg attccgctcg gcatgatccg ggggctgatc gaggagcgca cgcaactcta
     1741 cgatacggct cgcgccgaca tcgcgagctc ctggggacag ccgcagacgc tcggcggccc
     1801 ggttctcgtc gtgccgttcg agtacacgcg ctggatcaac ggcgagccca agatctatgc
     1861 cgacgagctg tatgcgctgc ccgagcagct cgacgtgacc gggaatgtcg atgcggaaga
     1921 gcggcgacgc ggcatctatc gcgtgcccgt ctacacgacg cggctgcgga tcacgggacg
     1981 attcccggca atcgcgctcg gcagcgagta ctccgatctc aagatcctgt gggagcagac
     2041 gcagatcgca ttgccattga ccgacgcgcg ctccgtgacc gagccgatcg tgctcgcgag
     2101 cggcaacggg acgacgacat tcgaagcaag cggtggacgc gtggcaggct tcggcccgca
     2161 gctcgtcgcg ccgtatgcgg cactcggcct cggcgcattg acggcaccgc aggccttttc
     2221 tttcgagctc gcgctcggcg gcaccggcgc cctgcacttc ttgccgctcg gcgacgagac
     2281 gcacgtcgcg atcacgtccg actgggcatc gccgagcttc gtcggcgcat tcctgcccgg
     2341 ggaccgcacc gtcgacgccg gcgggttcac ggcggagtgg cgcgtgctcg atctcggccg
     2401 cggttatccg tcgagctgga agcgatcgga gcctccgcaa gcggtcgcga cgtctgcgtt
     2461 cggcgccgag ctgatcactc cggtcggaat tcacgaggcg acgacgcgcg cggcgaagta
     2521 cgccgtgttg atcatcggcc tcacattcg
//
LOCUS       DATCUD010000592         2914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_6188, whole genome shotgun sequence.
ACCESSION   DATCUD010000592 DATCUD010000000
VERSION     DATCUD010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2914
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6188"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            44..301
                     /locus_tag="VIQ99_08635"
     CDS             44..301
                     /locus_tag="VIQ99_08635"
                     /inference="COORDINATES: protein motif:HMM:NF013199.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183251.1"
                     /translation="MSLAVFGGDLAGTLRAFDAATGQVLWETSLGAHVTGHPVTFAVD
                     GKQYVAVSTGRSNMTGGLSRLTPEAMPAESPNKLFVFALPD"
     gene            complement(290..823)
                     /locus_tag="VIQ99_08640"
     CDS             complement(290..823)
                     /locus_tag="VIQ99_08640"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183252.1"
                     /translation="MKFRRGLLARKAGRHADARREFGAAAELARRCGSKQLLVPSLKG
                     VAQIERDTGNAAAAVPLYEEAVANCRAIGDRALLAHTLRHLGDVHQDLEQLAPAETCY
                     REALALYRESGSAKPLDLANALRPYALLKERTGRNTEARELWAEAHRLYASVNAEAGV
                     AESASHMQRLDESSSVR"
     gene            948..1319
                     /locus_tag="VIQ99_08645"
     CDS             948..1319
                     /locus_tag="VIQ99_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018971500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BlaI/MecI/CopY family transcriptional regulator"
                     /protein_id="HEY9183253.1"
                     /translation="MKISEAEGKVMEVFWRAQGPLSADDVVAAMHSDRDWSAGTIRTF
                     LTRLVKKNALAATPEGRRYLYTPLVAREDYVHEQSRKLIDTLFGGRIAPFITHFSERQ
                     DLTRDEVDELKRLIERLEHDR"
     gene            1309..>2914
                     /locus_tag="VIQ99_08650"
     CDS             1309..>2914
                     /locus_tag="VIQ99_08650"
                     /inference="COORDINATES: protein motif:HMM:NF017390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M56 family metallopeptidase"
                     /protein_id="HEY9183254.1"
                     /translation="MIAEAILAALVRLNVVASVAILVVLALRPIVLRRLGANVAYWLW
                     SIVPIVAIASFVPAREQVVVVPPYASTAITEDSILAVDASTQPVGASIPVPAKAGAAP
                     TLADVAMVLWLLGAIALLARSIVATRRLARDPSVGPALVGVLRPRLVLPADFEARFNA
                     HERALILAHEGMHRVSGHTVVNALVEVARCLSWFNPLAHFAASRLRMDQELACDAAVI
                     AARPHERRAYAQALLRTQLGTAFLPLGCTWTSRSAKRIAERIEMVGRASSSRRAKLAG
                     AAGVLIVGTALGYTVWAQQPERVVTQVAVRPEAVWTPSVQAPPGTLAHALEGQRHDFF
                     IELAQKGDIDLVFFGATTTEMWWWPDRGRPVWDRELGALKAANFGAQGTHPESLVWRM
                     QNGELDGYRAKLVVLSDAHTPGEASPPDSRFKLPPNSRFSDWPSAYAAVIAEIRARQP
                     QAKVLILAAFPRGFRTLPEWREIAAAQAATFAGLVDDETVFYDDLSERFYGPDGSYNR
                     DLWGIPGPAGVGAQVPLFEVWAEGLEP"
BASE COUNT          470 a          971 c          960 g          513 t
ORIGIN      
        1 caccctgatc ttttgcagca tgcgaacggg tccatgagcc cgagtgagcc tagccgtatt
       61 cggcggcgac ctcgcgggca cgctgcgcgc cttcgacgcg gcgaccggcc aggtcctgtg
      121 ggagacttcg ctcggcgcgc acgtcacggg gcatcccgtg acgttcgccg tggacggcaa
      181 gcagtacgtc gccgttagca cgggccgttc gaacatgacc ggcggcctct cgcggctcac
      241 gcccgaggcg atgccggccg agagcccgaa caagctgttc gtatttgcgt taccggactg
      301 acgacgactc gtctagcctt tgcatgtgac tcgcgctttc cgcaacgccg gcctcggcat
      361 tcacgctcgc gtagagccgg tgggcctcgg cccaaagctc acgcgcctcc gtgttccggc
      421 cggtgcgttc cttcagtagc gcgtagggac gcagcgcgtt agcgagatcc aagggcttcg
      481 ctgaaccgct ctcgcggtac agcgccagcg cttcgcgata acaggtctct gccggcgcga
      541 gctgctcgag atcttggtgc acgtcgccaa ggtgacgcag cgtatgcgcg agcaacgcgc
      601 gatcgccgat cgcgcgacag ttggccacgg cttcctcgta cagtggcacg gccgcggctg
      661 cattgccggt gtcccgctcg atctgtgcga cgcctttcag agagggaacc agaagttgtt
      721 ttgagccgca ccttcgcgcg agctccgccg cggcaccgaa ctcgcgacgg gcgtcggcat
      781 ggcgtcccgc cttacgcgcg agcaggcctc gcctaaactt caagagcacc ctgatctttt
      841 gcagcatgcg aacgggtcca tgagcccgag tgagcctagc cgtattcggc ggcttgacta
      901 caactattac aggtgtattt taagagcaaa tacgcctgta tcagatcatg aagatcagcg
      961 aagccgaagg caaagtcatg gaggtgttct ggcgagccca aggcccgctc agcgccgatg
     1021 acgtcgtcgc ggccatgcac agcgatcgcg actggtcggc cggcacgatc cgcacgttcc
     1081 tgacgcgcct cgtgaagaaa aacgccctcg ccgcaacccc tgaggggcgc cgctatctgt
     1141 acaccccgct ggtcgcgcgc gaagactacg tgcacgagca gagccgcaag ctcatcgaca
     1201 cgctgttcgg cggaaggatt gcgccgttca tcacgcactt ttcggaacgc caagacctga
     1261 cgcgcgacga agtcgacgag ctcaaacggt tgatcgagag gctcgagcat gatcgctgaa
     1321 gcgattctcg cagcactggt gcgcctgaac gtcgtcgcga gcgtcgcgat cctcgtcgtg
     1381 ctcgcgctgc gccccatcgt cttgcgtcgc ctcggcgcca acgtcgcata ctggctctgg
     1441 tcgatcgtgc cgatcgtcgc gatcgcgagc ttcgtgccgg cgcgcgagca agtcgtcgtc
     1501 gtccctcctt acgcgagcac tgcgatcacc gaggattcga tccttgccgt cgatgcttca
     1561 acgcaaccgg tcggagcatc gatcccggtt cccgcaaagg ccggtgccgc tcccacgctc
     1621 gcggacgtcg cgatggtgtt gtggctgctc ggcgcgatcg cattgctggc gcggtcgatc
     1681 gtagccacgc gccgtctcgc gcgcgacccg tcggtcgggc ccgcgctggt gggcgtgctg
     1741 cggcccaggc tcgtgctgcc cgcggacttc gaagcgcgtt tcaacgcgca cgagcgcgcg
     1801 ctgattctcg cgcacgaggg aatgcatcgc gtgtcgggcc acaccgtggt caacgcgctc
     1861 gtcgaagtcg cgcgttgcct gagttggttc aacccgcttg cgcacttcgc tgcgagccgc
     1921 ctcaggatgg atcaggagct cgcatgcgac gcggccgtga tcgctgcacg tccgcatgaa
     1981 cgacgtgcct atgcgcaggc gctgctcagg acgcagttgg gcaccgcgtt cttgccactc
     2041 ggttgcacct ggacgagccg gtcggcgaag cgaatcgcgg agcgcatcga gatggtgggc
     2101 cgcgcgtcct cgagtcgtcg cgcgaagctc gccggtgcgg ccggcgttct cattgtgggc
     2161 accgcattgg gttacaccgt gtgggcacag cagcccgagc gcgtcgtgac gcaagtcgcc
     2221 gtccgaccgg aggcggtctg gacaccgtcc gtgcaggccc cgccggggac actggcgcat
     2281 gcgctcgagg ggcaacggca cgacttcttc atcgagctcg cgcagaaggg cgacatcgac
     2341 ctcgtgttct ttggtgccac gaccacggag atgtggtggt ggcccgaccg tggccggccc
     2401 gtgtgggacc gggagctcgg cgcgctgaag gccgcgaact tcggagcgca gggcacgcac
     2461 cccgagagcc tcgtgtggcg gatgcaaaac ggagagctcg atggctaccg cgcgaagctc
     2521 gtcgtgctca gcgatgccca tactcctggg gaggcgtcgc cgcccgactc ccgtttcaag
     2581 ttgccgccca actcccgctt cagcgattgg ccgtcggctt acgcggccgt gatcgcggag
     2641 atccgcgcgc gccaaccgca ggccaaagtg ctgatcctcg ccgcgttccc gcgtggattt
     2701 cggacgcttc cggaatggcg cgagatcgcc gcggcgcagg ccgcgacgtt cgcgggcctc
     2761 gtcgacgacg aaaccgtgtt ctatgacgat ctcagcgagc ggttctacgg gcccgacggc
     2821 tcgtacaacc gcgatctgtg gggcataccc ggaccggcgg gcgtcggagc acaagtgccg
     2881 ctcttcgaag tgtgggcaga aggcctcgag cctt
//
LOCUS       DATCUD010000593         2038 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105065, whole genome shotgun sequence.
ACCESSION   DATCUD010000593 DATCUD010000000
VERSION     DATCUD010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105065"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2038)
                     /locus_tag="VIQ99_08655"
     CDS             complement(<1..>2038)
                     /locus_tag="VIQ99_08655"
                     /inference="COORDINATES: protein motif:HMM:NF012573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183255.1"
                     /translation="KGDDRLSGDEGSDALFGGEGKDVLGGGAGDDGATLFFSADQATK
                     DANGLHGGDGDDRLSGDGGNDWVFGEDGADKIEGGEGDDVLVGGDGDDRYVLLDAFGR
                     DFVIEESGDGEDLLDLSQVTADLGVTLGGAAGEFFSIHGDAGDLVTAGTSVEALKAGK
                     GTNTFTVLQSFFDNFDPDGLFNRTLRIENTLEGDLASAILDLSAVTHALSVTVENRTD
                     AGVKNVVTVEFDSGALLTANKKLVMTNVAGLKTGSGKDVLELGDGVQLAGGVALGGGN
                     DQVTFGEGANIALGLDGGGGDNLIVYRGKTTGVDFTFGPQAFPRVGGETVNFQSVTGT
                     SAHDVIVGDDVANTLTGGGGGDRLSGAGGDDTLATGKGADELDGGDGKDTLTGGDGKD
                     QLTGGAGDDTLDGGGDEDTYVFENGWGKDVIVSHFFDRQQDVIDLSRVTGALQYSIAD
                     DQIKIGAGTLQRDAGTFGFVYASGSFDAAVADTITVGGSGVGGFFGYNVSKMLTGAAD
                     QTLYFGNSWKSLDIDASATSAADKVLRLDFSGASVPLNFTFDRDPADQGGRTFLKIGN
                     LGVLGASVRDLVGLIPEITVRGLDERTEIITGSNGNTLQVTNNADFKGKVVLLEGPQY
                     SKVPLADEIALPSGLRIENALDFTQGIGDTFRDLKEFFSKPSSAAEWNFVTHVDL"
BASE COUNT          285 a          713 c          680 g          360 t
ORIGIN      
        1 ggagatcgac gtgcgtcacg aagttccact cggccgccga gctcggcttg gagaagaatt
       61 ccttcaggtc gcggaacgta tcgccgatgc cctgggtgaa atcgagggcg ttctcgatgc
      121 gcagcccgct gggcagcgcg atctcgtccg cgagcgggac cttgctgtac tgcggcccct
      181 cgagcagcac gaccttgccc ttgaagtccg cgttgttcgt cacctgcagc gtgttgccgt
      241 tgctgccggt gatgatctcg gtgcgctcgt cgagcccgcg cacggtgatc tcggggatca
      301 ggcccacgag gtcgcgcacg ctcgcgccga gcacgccgag attgccgatc ttgaggaagg
      361 tccggccgcc ctggtccgcc ggatcgcggt cgaaggtgaa gttcagcggc acgctcgcgc
      421 cgctgaaatc gagcctgagc accttgtcgg cggcgctggt cgccgaggcg tcgatgtcga
      481 gagacttcca gctgttgccg aagtacagcg tctggtcggc cgcgccggtg agcatcttgc
      541 tgacgttgta gccgaagaag ccaccgacgc ccgagccgcc gacggtaatg gtgtccgcga
      601 ccgcggcgtc gaagctgcca cttgcgtaga cgaagccgaa cgtgcccgca tcgcgctgca
      661 aagtgccggc gccgatcttg atctggtcgt cggcgatgct gtactggagc gcgccggtca
      721 cgcgcgacag gtcgatgacg tcctgctggc ggtcgaagaa gtgggacacg atgacgtcct
      781 tgccccagcc gttctcgaag acgtaggtat cctcgtcgcc gccgccgtcg agcgtatcgt
      841 ccccggcgcc gccggtgagc tggtccttgc cgtcgccacc ggtgagcgtg tccttgccgt
      901 cgccgccatc gagctcgtcc gcgcctttgc ccgtcgcgag cgtgtcgtct ccgcccgcgc
      961 cggacaggcg atcgccgccg ccgccgccgg tgagggtatt ggcgacgtcg tcgccgacga
     1021 tcacgtcgtg ggcgctcgtg cccgtgaccg actggaagtt gacagtctcg ccaccgaccc
     1081 gcgggaatgc ttgcgggccg aaggtgaagt ccacgcccgt cgtcttgccg cggtagacga
     1141 tcaggttgtc gccgccgccg ccgtcgaggc cgagcgcgat gttcgcgcct tcgccgaacg
     1201 ttacctggtc gttcccgccc ccgagcgcga cgccgcccgc gagctgcacg ccgtcgccca
     1261 gctcgagcac gtccttgccg gagcccgtct tcaggccggc gacgttggtc atcaccagct
     1321 tcttgttggc cgtgagcagc gcgccggagt cgaactcgac cgtgacgacg ttcttgaccc
     1381 ccgcgtccgt gcggttctcc accgtcaccg acagcgcgtg cgtcaccgcc gacaggtcga
     1441 ggatggcgct ggcgagatct ccctcgagcg tgttctcgat gcgcaacgtg cggttgaaca
     1501 ggccgtccgg gtcgaagttg tcgaagaagc tttgcaggac ggtgaaggta ttggtgccct
     1561 tgccggcctt cagcgcctcg acgctcgtgc cggccgtgac gagatcgccc gcatcgccgt
     1621 ggatgctgaa gaactcgccg gccgcgccgc cgagggtgac ccctaggtcc gcggtgacct
     1681 ggctgagatc gagcaggtcc tcgccgtcgc cgctctcctc gatcacgaaa tcgcggccga
     1741 aggcatcgag cagcacgtaa cggtcgtcgc cgtcgccgcc gaccagcacg tcgtcgcctt
     1801 cgccgccctc gatcttgtca gcaccgtcct cgccgaagac ccagtcgttg ccgccgtcgc
     1861 cggacaggcg gtcgtcgccg tcgccgccgt gcaggccgtt ggcgtccttg gtggcctgat
     1921 ccgcggagaa gaagagcgtc gcgccgtcgt cgcctgcgcc gccaccgaga acgtccttgc
     1981 cctcgccgcc gaacagcgcg tcgctgccct cgtcgccgga caggcggtca tcgccctt
//
LOCUS       DATCUD010000594         2596 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48431, whole genome shotgun sequence.
ACCESSION   DATCUD010000594 DATCUD010000000
VERSION     DATCUD010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48431"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2409
                     /locus_tag="VIQ99_08660"
     CDS             <1..2409
                     /locus_tag="VIQ99_08660"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183256.1"
                     /translation="CLAVATLAIGSGAATTTLSVVDSILLEPLAYPEGDELVSIWHDA
                     PGATLPVDRGGLPSSASMYVTYAEQNRVFEHIGIWTPGVATITGDGEPEEVPRIAVTT
                     GLLEALGVAPLLGRWFSADDRTDTGGTVILSYGYWQRRFGGDPNVIGRTLTVNAGPRE
                     IVGVMPPGFRIADTEADLLMGPMTFPRASLTLAPFSYPGIARLKPGMTVEDANADVAR
                     MISIWQDSWPAAAGVDPRIYTDAWKIAPALRPLKQDVVGDVADLLWVFMATIAVVLLI
                     AYANVTNLMLIRGTARRHELAIRAALGAGVGRLRRTVLLESLLVALLGGLAGLAIAAA
                     ALRGLVTLGPATLPRLGEVALDADVVVVAIGVALLAGVLVGLVQALRLDGWGLNEGLH
                     AGGRTSSGGRAQQRVQRSLVITQVALAVVVLISAGLSIRTVVALRGVAPGFSGAEQVQ
                     TLRISMRDSQVPDPVLVARRQQEILDAFAALPGVTAVGLASSMPMDRFNALGDSVEIE
                     GRPKEPVVRRFKGVSPGVFGALGVPLAAGRDYSWQDLYEYRPVVMISEAMARDLWQEP
                     AAALGKRLRTLDSEPWREIIGVVADVREDGLRESAPQVVYWPVLTRQGSPPAADVWRS
                     VVFAVRSNGAGNDDLNRELEQAVWSVDPNLPVTWVRTLKDIYDLSEARTTFTLVTLVV
                     AASAALALGVVGLYGVLSYAVALRRREIAIRLALGAQQRELRRRFVRAGVALASLGIA
                     IGMVAAAGVTRLMASLLFGVEPVDPLTFATVAAVLIAVAALASYLPARRASSVDPAEA
                     LAAE"
BASE COUNT          350 a          855 c          932 g          459 t
ORIGIN      
        1 tgtctcgcag tcgcgacgct cgccatcggc agcggtgcgg cgacgacgac gttgagcgtc
       61 gtcgacagca tcctgctcga gccgctggcg taccccgaag gcgacgagct cgtatcgatc
      121 tggcacgacg ctccaggcgc gacgttgccg gtcgaccggg gtgggctgcc gtcgtcggca
      181 tcgatgtacg tcacgtacgc ggagcagaac cgcgtgttcg agcacatcgg catctggacg
      241 ccgggcgttg caacgattac cggcgacggc gagccggaag aagtcccgcg catcgccgtg
      301 acgaccggcc tgctcgaggc gctaggcgtc gcgccgctgc tcggccgttg gttcagcgcc
      361 gacgatcgca ccgacaccgg cggcaccgtg atcttgagct acggctattg gcaacgccgc
      421 ttcggcggcg acccaaacgt catcgggcgc acgctcacgg tgaatgccgg ccccagagag
      481 atcgtcgggg tcatgccgcc gggctttcgc atcgccgaca ccgaagccga cttgctgatg
      541 gggccgatga cgtttccgcg tgcctctttg acgctcgctc cgttctcgta ccccggcatc
      601 gcgcgcctga agcccgggat gacggtcgag gacgccaacg cggatgtcgc gcggatgatc
      661 tcgatttggc aggactcctg gccggcggcc gcgggggtag atccgcgcat ctacaccgac
      721 gcgtggaaga tcgcgccggc gctgcgcccg ttgaaacagg atgtcgtcgg ggacgtcgcc
      781 gatttgttgt gggtcttcat ggcgacgatc gcagtggtgc tgctgattgc atacgcgaac
      841 gtcacgaacc tgatgctgat ccgcggcacc gcgcgtcggc acgagctcgc gatacgcgcc
      901 gcgctcggcg ccggagtcgg gcgattgcgc cgcaccgtgc tgctcgagag cctgctcgtg
      961 gcgctgctcg gcgggctcgc gggcctcgcg atcgcggcgg ccgctctgcg agggctcgtg
     1021 accctcgggc cggcgacgct gccgcggctc ggcgaggtcg ctctcgacgc cgacgtcgta
     1081 gtcgtcgcga tcggtgttgc gttgctggcg ggtgtgttgg tcgggctcgt gcaggcgctg
     1141 cggctcgatg gctgggggct caacgaggga ctccacgcgg gtggtcgaac gtcgagcggc
     1201 gggcgcgcgc agcaacgcgt gcagcgttcg ctcgtgatca ctcaggtcgc actggcggtc
     1261 gtcgtgctga tctcggccgg gttgtcgatc cgcactgtcg tcgcgctgcg cggcgtcgcg
     1321 cccggattct cgggagccga gcaagtccag acgttgcgga tctccatgcg cgacagccag
     1381 gttcccgacc ccgtgctcgt cgccaggcgg cagcaagaga ttctcgacgc gttcgcggca
     1441 ctgcccggcg tcacggccgt cggcctggcg agctcgatgc cgatggaccg cttcaacgcc
     1501 ctcggcgata gcgtcgagat cgagggccga ccgaaagagc cggtggtgcg ccgcttcaag
     1561 ggcgtctcgc ccggagtctt cggcgccctc ggcgtaccgc tggccgccgg cagagactat
     1621 tcgtggcagg acctctacga gtaccggccc gtcgtgatga tctcggaggc catggcgcgc
     1681 gacctctggc aggagcccgc ggccgcgctc gggaagaggc tgcgtacgct cgacagcgag
     1741 ccgtggcgcg agatcatcgg cgtcgtcgcg gacgtccgtg aggacggcct gcgggagtcg
     1801 gcgccgcagg tcgtgtactg gcccgtgctg acgcgccaag gctcgccgcc cgccgccgat
     1861 gtctggcggt ccgtggtctt cgccgtgcgc agcaacggcg ccggcaacga tgatttgaat
     1921 cgcgagctcg agcaggccgt gtggtccgtg gacccgaacc tccccgtcac ctgggtccgc
     1981 acgctgaagg acatctacga cctatccgaa gcgcgtacga cgttcacgct cgtgacattg
     2041 gtcgtcgccg catctgccgc gctcgcgctc ggcgtcgttg ggctttacgg tgtgctgtcg
     2101 tatgcggtgg cgctgcgccg tcgcgagatc gcgatccggt tagcgctcgg cgcgcagcag
     2161 cgcgagctgc ggcgtcggtt cgtgcgcgcc ggcgtcgcgc tcgcgagcct cggcatcgcg
     2221 atcggcatgg ttgcggccgc aggcgtcacg cgcctgatgg catcgctgct gttcggcgtc
     2281 gagcccgtcg atcccttgac gttcgcgacg gtcgcggcag tgctaattgc cgtcgccgcg
     2341 ctcgcgagct acttgccagc tcggcgagcc tcgtcggtcg atcccgcgga agctctggcc
     2401 gcagagtagg tctggtgtta gttgtgtgcg aacgatttgc gttcaagaaa tccctccgcg
     2461 gagggattca tgtcgaagtg atcgggagac ttggcgatga atagtgctct gcaagacgtt
     2521 cggtacgcgc tgcgcgcgct cacggcgcgg ccgctgtacg cgatcgcgtc gatcgcggtg
     2581 cttgccgtcg cgatcg
//
LOCUS       DATCUD010000595         1691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48442, whole genome shotgun sequence.
ACCESSION   DATCUD010000595 DATCUD010000000
VERSION     DATCUD010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48442"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VIQ99_08665"
     CDS             <1..244
                     /locus_tag="VIQ99_08665"
                     /inference="COORDINATES: protein motif:HMM:NF015043.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016702 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of two atoms of oxygen [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HEY9183257.1"
                     /translation="AGTETSLAENCFAPRSKDAPEGAGYLMGLATRNSEGGRGDLVIL
                     DAEHLADGPVATVHLPMRAPAQVHGWWVPEWQMPAA"
     gene            256..897
                     /gene="alkB"
                     /locus_tag="VIQ99_08670"
     CDS             256..897
                     /gene="alkB"
                     /locus_tag="VIQ99_08670"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002635769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HEY9183258.1"
                     /translation="MFAARGETEAARCDLAPGAALLRGFALQHDADLSRAVADVTAAA
                     PFRHMRTPGGFTMSVAMTNCGELGWVSSEAGYRYAMRDPDSGLPWPRLPHAIRNLATN
                     AAAAAGFPSFVPDACLINRYEPGARLTLHQDKDERDFTQPIVSVSLGVPATLLFGGLK
                     RKDRPQRVLLEHGDVFVFGGESRLGYHGVAPLRESGHPFAGSARINLTLRRAG"
     gene            complement(869..1093)
                     /locus_tag="VIQ99_08675"
     CDS             complement(869..1093)
                     /locus_tag="VIQ99_08675"
                     /inference="COORDINATES: protein motif:HMM:NF018630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEY9183259.1"
                     /translation="MMERMNRPPDPLASPCVRNCCLDDANICMGCGRLLQEIVAWGTA
                     CDADKAAILARSRERLHARERANRRDAASD"
     gene            1192..>1691
                     /locus_tag="VIQ99_08680"
     CDS             1192..>1691
                     /locus_tag="VIQ99_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018341849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HEY9183260.1"
                     /translation="MKLFEPYSLGKLRLQNRVVMAPMTRSRAIGNVPNDLMAEYYGQR
                     SSAGLIITEGVAPSPNALGYSRIPGGFSAAQTEGWKKITAAAHRGGAKIFMQQMHTGR
                     ISHPLNLPAGAEVVAPSAVKAAGQMWTDQSGMQDLPVPRALATGEIAGVIAEHVNTSK
                     NAIAAG"
BASE COUNT          272 a          535 c          594 g          290 t
ORIGIN      
        1 cgcaggcacc gagacgtcgc tggcagagaa ttgcttcgcg ccgagatcca aagacgcgcc
       61 cgagggcgcg ggctatctca tggggctcgc cacgcgtaac agcgagggtg ggcgcggtga
      121 cctcgtgatc ctcgacgccg agcatctcgc ggacggtccg gtggccacgg tgcacttgcc
      181 gatgcgcgca ccggcccagg tgcacggctg gtgggtgccg gagtggcaga tgccggcggc
      241 gtgatcgcgc gcgacctgtt cgcggcgcgc ggcgaaaccg aagcggcgcg ttgcgacttg
      301 gcgcccggag ccgcgctgct gcgcggcttc gcgctgcagc acgacgcaga cctttcgcgc
      361 gctgtcgcag acgtgacggc tgccgcgccg tttcggcata tgagaacacc gggcggcttc
      421 acgatgtccg tcgctatgac gaactgcggc gagctgggct gggtgtcgag cgaggccggt
      481 tatcgctatg ccatgcggga tcccgacagc gggttacctt ggccgcggtt gccgcacgcc
      541 atccgcaatc tcgcgacgaa cgcggctgcg gccgcgggat tcccgagctt cgttcccgat
      601 gcatgcctga tcaatcgcta cgagcccggc gccaggttga ccctgcacca ggacaaggac
      661 gagcgcgact tcacgcagcc gatcgtgtcc gtctcgctcg gtgtgcccgc cacgttgctg
      721 ttcggcggtt tgaagcgcaa ggaccggccg caacgcgtgt tgctcgagca cggcgatgtc
      781 ttcgtgttcg gtggcgagag ccggctcggc tatcacggtg tcgcgccgct ccgcgaatcc
      841 ggccatccgt tcgccggctc ggccagaatc aatctgacgc tgcgtcgcgc cggttagcgc
      901 gctcgcgggc atgcaggcgc tcgcggctcc gagcgaggat tgcagccttg tccgcgtcac
      961 aggctgttcc ccacgccacg atctcctgta gcaagcgtcc gcaacccatg cagatgttcg
     1021 cgtcgtcgag acagcagttg cgcacgcagg gcgaggcgag tgggtccggc ggccgattca
     1081 tgcgctccat catatggcag gaagctatga cgttacgctg aagtgagctt gcggccgtcg
     1141 cggaccgtgg tgttagatga ccgcccttta cgtaacggta tggattgaag catgaagctc
     1201 ttcgaaccgt attccttggg caagctgcgt ttgcagaacc gcgtcgtgat ggcgccaatg
     1261 acgcggagtc gagcgatcgg caacgtgccg aacgatttga tggcggagta ttacggtcag
     1321 cgttcgagcg cgggcctgat catcaccgag ggtgttgcgc cgtcgccgaa tgcgctcggc
     1381 tattcgcgga tcccgggcgg gttctcggcc gcgcagaccg aagggtggaa gaagatcacg
     1441 gcggccgcgc accgcggcgg cgcgaagatc ttcatgcagc agatgcacac gggccggatc
     1501 tctcatccgc tgaacttgcc ggccggggcc gaggtcgtcg cgccgtcggc ggtcaaggcg
     1561 gcggggcaga tgtggacgga ccaatccggc atgcaggact tgcccgtgcc gcgcgcgctc
     1621 gccaccggcg agattgccgg agtgatcgca gagcacgtga acacgtcgaa gaatgcaatc
     1681 gcggccggct t
//
LOCUS       DATCUD010000596         1821 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62325, whole genome shotgun sequence.
ACCESSION   DATCUD010000596 DATCUD010000000
VERSION     DATCUD010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1821
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62325"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..432
                     /locus_tag="VIQ99_08685"
     CDS             <1..432
                     /locus_tag="VIQ99_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020164636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY9183261.1"
                     /translation="YGLTLAGVPKAERDERARNVLDAVGLRPVANRPARVLSGGEQQK
                     LALARAWALDPEVLFLDEPTANLDPAATREVERIVDQIHASGTKIVMTTHNLGQARRL
                     ADEILFMSAGRLTDHAPVERFFAEPSTAEAAAFIKGELPWS"
     gene            423..1256
                     /locus_tag="VIQ99_08690"
     CDS             423..1256
                     /locus_tag="VIQ99_08690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9183262.1"
                     /translation="MELKAHFFNIGYLLIALACAPSALGQQFITVASTTSTEQSGLFG
                     HLLPIFEQKTGIEVRVVALGTGQALDLARRGDADVVFVHARSAEEQFLREGHGVQRFP
                     VMYNDFVIVGPKADPAGIAGGVDTLDAFRKIKSTGAPFVSRGDRSGTHIAEVNFWTMA
                     GVDIEKEKGSWYRETGQGMGPALNTASSMNAYLLADRATWLAFKNRGELTILVEGDKR
                     LMNQYGVMLVNPEKHAHVKRVEGQAFIDWLVSAEGQASIAGYKIEGEQLFFPNAGEPG
                     A"
     gene            complement(1284..>1821)
                     /locus_tag="VIQ99_08695"
     CDS             complement(1284..>1821)
                     /locus_tag="VIQ99_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183263.1"
                     /translation="ADGREAALKAAIAAVTDDPPEALRLIGHYRAICGADDPEISLSE
                     ARMALATGDRRHAVFALEELNAITDPAHPSRETAAALYREALQVVDGCPPPVSPTLPD
                     ATTATMEEMIAGQTQVRAFVAAAETYLTCLASVIDDDKRSAEDRNTAVSEHNRTVSAM
                     EQMAAAFNEQIRIFKARD"
BASE COUNT          313 a          583 c          608 g          317 t
ORIGIN      
        1 tacgggctta cgctcgccgg cgttcccaaa gcggagcgag acgagcgtgc acgcaacgtc
       61 ctcgacgcgg taggccttcg tccggttgcg aatcggcccg cgcgtgtgtt gtcgggcggt
      121 gagcaacaga agctcgcgct cgcgcgcgcg tgggcactcg accccgaggt gctgtttctc
      181 gacgagccga cggccaacct cgatcccgcc gcaacgcgag aggtcgagcg catcgtcgac
      241 cagattcacg cgagcgggac gaagatcgtg atgacgaccc ataatttggg acaggcccgc
      301 cgcctcgcgg acgaaattct gttcatgagc gccggtaggc tgacggatca tgcacccgtg
      361 gagcgttttt tcgcggagcc gtcgaccgcg gaagcggccg cgttcatcaa gggagagctg
      421 ccatggagct gaaggctcac ttcttcaaca tcggctacct gctcattgcg ctcgcttgcg
      481 cgccgagcgc acttggacag caattcatca cggtggcgtc gacgacgtcg accgagcagt
      541 cgggtctctt cggacacctc ttgccgatct tcgagcaaaa gacgggcatc gaggtgcgcg
      601 tcgtcgctct cgggaccggc caggcgctcg acctcgcgcg ccgcggcgac gccgacgtcg
      661 tgttcgtgca cgcgagatcg gccgaagagc agttcctccg cgagggccac ggcgtgcagc
      721 gctttcccgt catgtacaac gacttcgtca tcgtcgggcc gaaagcggat ccggccggta
      781 tcgcaggtgg tgtggacact ctcgacgcgt ttcgcaagat caagagcacg ggcgcgccgt
      841 tcgtttcgcg cggcgaccga agcggcactc acatcgcaga ggtcaatttc tggacgatgg
      901 cgggcgtcga catcgagaaa gaaaaaggct cctggtatcg cgagacgggg caagggatgg
      961 gacccgcgtt gaacactgcg tcctcgatga atgcctacct gctcgccgac cgggccacgt
     1021 ggctcgcctt caagaatcgc ggcgagctca cgatcctcgt cgagggcgac aagcgcctca
     1081 tgaatcaata cggcgtcatg ctcgtgaatc ccgagaagca cgcacacgtg aagcgcgtcg
     1141 agggtcaggc gttcatcgat tggctcgtgt cggccgaagg acaggcatcg atcgccggat
     1201 acaaaatcga gggcgagcag ctgttcttcc cgaacgccgg cgagcccggc gcgtgagcgg
     1261 ctcacccccg gcagagaccg acgctaatcg cgcgccttga agatacgaat ctgctcgttg
     1321 aacgcggcgg ccatctgctc catcgccgag accgtgcggt tgtgctcgct gaccgccgta
     1381 ttgcgatcct cggcgctgcg cttgtcgtcg tcgatcacgc tcgcgaggca ggtcaagtac
     1441 gtctcggccg cggcgacgaa cgcgcggact tgcgtttgtc cggcaatcat ctcttccatg
     1501 gttgccgtcg tcgcgtcggg cagcgtaggg gatacgggcg gcgggcagcc gtcgacgact
     1561 tgcagcgctt cgcggtacaa cgcggccgct gtctctcggc tcgggtgcgc gggatccgtg
     1621 attgcgttca gctcctcgag cgcgaaaact gcgtgacgcc gatcgccggt cgcgagcgcc
     1681 atgcgcgctt cgctgagcga gatctcggga tcgtcggcgc cgcagatcgc gcggtaatga
     1741 ccgatcaggc gcaaggcttc gggcgggtcg tcagtgacgg ccgcgatcgc ggccttcagg
     1801 gccgcctcgc gcccgtccgc c
//
LOCUS       DATCUD010000597         2148 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105104, whole genome shotgun sequence.
ACCESSION   DATCUD010000597 DATCUD010000000
VERSION     DATCUD010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105104"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VIQ99_08700"
     CDS             <1..318
                     /locus_tag="VIQ99_08700"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9183264.1"
                     /translation="LADTVMDPNYLQHNPNVPQGRDGFKQFMSRTPGRTPVEIKPEWV
                     RPPSLTLVSGPYVLMMWDRTEKDPNDPAREYVWNHFDVIRVENGLIKEHWDEAVIAPP
                     ATR"
     gene            323..1240
                     /locus_tag="VIQ99_08705"
     CDS             323..1240
                     /locus_tag="VIQ99_08705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183265.1"
                     /translation="MAGGSRIALVLLALAALPSVPAYSQVDFSGNWVPLFHEDQPERL
                     PGPELGDYSGIPLNDAGRMRGDSYDGDRISVVTEYQCRPHGGDYSMRGLANMRVEQIL
                     DPLTQRVRAIHLRMNFQEQERTIWLDGREHPQPLAAHTFAGFSTGTWNGNMLDVETTH
                     LKPNYLRRNGLPRSDRATFTEHWVRHGDYLTITTLIRDPAFLTEPLVRSQTWVIAPEQ
                     RLGRDVCVYVPELVGEPDYVPNHLPGTNPFLREVIDWYGLPEAGVRGGSETLYPEFLD
                     KLGLPAAAPPRQCERYCRCGEFGRGCDLK"
     gene            1264..>2148
                     /locus_tag="VIQ99_08710"
     CDS             1264..>2148
                     /locus_tag="VIQ99_08710"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183266.1"
                     /translation="MTLVAAALAAPLCEAQQDFSAVELSVLPVQGNICMLAGAGGNIS
                     VQVGDEGVLVVDTQFAPLAPKIMAEIEKLSKGPVRFIINTHAHPDHVGGNAALAEMIK
                     PTSLEPLQMIAHENALARLSNPPAGEAATPAGGLPIDSYFTPTKDFHFNGEAVFLYHV
                     PSAHTDGDTVVLFRESDVVSTGDLFAPGSYPFIDRARGGSVQGLIAGLNQILHLTVPA
                     KTQERGTYVIPGHGRICDEADVVEFRDMIVIVRDRVADMIARGSTLRQIQAARPTLDY
                     DTEYVDEDSFITAEEFVEA"
BASE COUNT          398 a          713 c          666 g          371 t
ORIGIN      
        1 ctcgccgata ccgtcatgga tcctaactac ctgcagcaca acccgaacgt cccgcagggc
       61 cgcgacgggt tcaagcaatt catgagcagg actcccggcc gcacgccggt cgagatcaag
      121 cccgagtggg tcaggccgcc atcattgacg ctcgtcagcg gcccctatgt gctcatgatg
      181 tgggaccgca cggagaaaga cccgaacgac cccgcgcggg agtacgtgtg gaaccacttc
      241 gacgtcattc gcgtcgagaa cggcctgatc aaggagcatt gggacgaagc cgtcatcgca
      301 ccgcccgcga cgcgctgagc cgatggccgg cggttcgaga attgcgctcg tcctgctcgc
      361 tctggccgca ctaccgagcg tgcccgccta ctcgcaagtc gacttctccg gcaactgggt
      421 tccgctgttc cacgaggatc aaccggagcg gttaccgggt ccggagctcg gcgattattc
      481 cggcattccg ttgaacgacg cgggccgcat gcgcggcgac tcgtacgacg gcgacaggat
      541 ctccgtcgtc acggaatatc aatgccggcc gcacggcggc gactactcga tgcgcgggtt
      601 ggcgaacatg cgcgtcgagc aaatcctcga cccgttgaca caacgcgtgc gcgcaattca
      661 cttgcgcatg aacttccaag aacaggagcg cacgatctgg ctcgacggcc gcgagcatcc
      721 gcagccgctc gccgcgcaca ccttcgcggg tttctcgacg ggcacctgga acggcaacat
      781 gctcgacgtc gagacgacgc acttgaagcc gaactatctt cggcgcaatg ggctaccccg
      841 cagcgaccgt gcgacgttca cggagcattg ggtccggcat ggcgactact tgacgatcac
      901 gaccctgata cgcgacccgg cttttctcac tgagccactc gtgcgcagcc aaacgtgggt
      961 gatcgcgccg gagcaacggc tcggccgcga cgtgtgcgtc tacgtccccg agctcgtcgg
     1021 cgagcccgat tacgtgccga accatctacc gggaacgaat ccattcttgc gcgaggtcat
     1081 cgattggtac ggcttgcccg aagccggcgt gcgcggcggc agcgagacgt tgtacccgga
     1141 gtttctcgac aagctcggct tgccggccgc ggccccgccg cgtcaatgcg agcgctactg
     1201 ccgctgcggc gaattcggcc gcggttgcga cctcaaatga gccgcccgat acccattcgt
     1261 tgcgtgacgc tcgtcgccgc tgcgctcgct gcgccgctct gcgaagcaca gcaggacttc
     1321 tcggccgtgg agctcagcgt gctgccggtg caaggtaaca tctgcatgct cgcaggcgcc
     1381 ggcgggaaca tcagcgtcca ggtcggtgac gaaggggtcc tcgtcgtcga cacgcagttt
     1441 gcgccgctcg cgccgaaaat catggcggag atcgagaaac tgtcgaaggg tcccgtgcgg
     1501 ttcatcatca atacgcacgc tcatcccgat cacgtcggcg gtaacgcggc gctcgctgag
     1561 atgatcaagc cgacgtcgct cgagccgttg cagatgattg cgcacgagaa tgcgcttgcg
     1621 cgcctctcca atccgccggc cggggaagcc gcaacaccgg ccggtggcct gccgatcgat
     1681 tcgtatttca cgcccacgaa ggattttcat ttcaacggcg aggccgtgtt cctgtatcac
     1741 gtgccgagcg cgcataccga cggcgacacg gtcgtgctgt tccgcgagtc agacgtcgtc
     1801 agcaccggag atctgttcgc gcccggcagc tatcccttca tcgatcgtgc tcggggcggc
     1861 agcgtgcaag gcctgatcgc gggattgaat cagattctgc acttgaccgt gcccgccaag
     1921 acgcaggaac gcggcacgta cgtgattccg ggtcacggcc gcatttgcga cgaagccgac
     1981 gtcgtcgagt ttcgcgacat gatcgtcatc gtgcgcgacc gcgtcgccga catgatcgcg
     2041 cggggcagca cgctcaggca gatccaggcc gctcgaccga cgctcgacta cgacaccgag
     2101 tatgtcgacg aagacagctt catcacggcc gaggagttcg tcgaagcc
//
LOCUS       DATCUD010000598         1649 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20108, whole genome shotgun sequence.
ACCESSION   DATCUD010000598 DATCUD010000000
VERSION     DATCUD010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20108"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1477
                     /locus_tag="VIQ99_08715"
     CDS             122..1477
                     /locus_tag="VIQ99_08715"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF012470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY9183267.1"
                     /translation="MIVALLACQGCVSTGGAPSGAAPKVVLIIGDGMDDQQITIARHY
                     LVGEAGALALDGMPQRAAVRMQTVAEEDPSLPDYVPDSANTATSMAAGIVTSAGRIAT
                     TAGTDRDVVTIMELAADAGFGTGIVTTASVTDATPASFVAHVNWRLCEGPRSMVPRSQ
                     GNGLFTTNCSADLKANGGQGSISEQIAASRVDVVLGGGFQHFDQPAEGETTKTVADLA
                     ADNGFTVVRTGPELAALPDSGRVLGLFSPSTMPVQWRGAGDAQAERVQRVEGRPMLPE
                     PFSCEPNPEFAAMPTLPAMASAALERLDGKAFVLMIESASIDKQSHLRRPCGQIGELG
                     QLDDTLKVVLDYARAHPETLVLVTADHSQAAQLVPETSVLAALNAASPGYFARVRTPE
                     GGVMGVSYATNDSNIQEDHTGADVPLFASGPGADEIPSSLRQPEIFGVMLRHLGLSAP
                     R"
BASE COUNT          270 a          536 c          583 g          260 t
ORIGIN      
        1 gtgcggatcg agtatccggc cgacttcagc gcgcagatgc tcgagtacgc cgaccgttac
       61 gcgttcctgc ccacctggaa ctagctcgag gagctcgctc gtgatcaaga ccgcgacccc
      121 catgatcgtt gccctgctcg catgtcaggg ctgtgtcagc accggcggcg ctccgagcgg
      181 agcggcgccg aaggtcgtgc tgatcatcgg cgacggcatg gacgatcaac agatcacgat
      241 cgctcggcac tatctcgtcg gtgaagccgg agcgctcgcg ctcgatggca tgccgcagcg
      301 tgccgcggtc cgtatgcaga ccgtggccga ggaagacccg tcgttgcccg actacgtgcc
      361 ggactccgcg aacacagcga cgtcgatggc tgcgggcatc gtcacgagcg ccgggcgcat
      421 cgccacgacg gccggtaccg accgtgatgt cgtaacgata atggagctcg cggccgacgc
      481 aggattcggc accgggatcg tcacgaccgc gagcgtgacg gatgcgacgc ccgcgtcgtt
      541 cgtcgcgcac gtgaactggc gcttgtgcga aggaccgcga agcatggtgc cgcgcagtca
      601 aggcaacggg ctgttcacta cgaactgttc ggctgatctc aaggcgaacg gtggtcaggg
      661 atcgatctcg gagcaaatcg cggcgtcgcg tgtcgacgtg gtgctgggcg gtggcttcca
      721 acatttcgac cagccggccg agggcgagac gacgaagacc gtggcggatc tcgcggcgga
      781 taacggcttc accgtcgtgc gtaccgggcc cgagctcgct gcgcttccgg acagcgggcg
      841 agtgctcggg ttgttctcgc cgagcacgat gccggtgcaa tggcgaggcg ccggtgacgc
      901 gcaggccgaa cgcgtgcagc gcgtcgaggg ccgcccgatg ctgccagagc ctttctcgtg
      961 cgagccgaac cccgagttcg cggcgatgcc gaccctgccc gcgatggcga gcgcggcgct
     1021 cgagcgtctc gacgggaagg cattcgtgct gatgatcgag tcggcatcga tcgacaagca
     1081 gtcgcacctg cggcgcccgt gcggccagat cggcgagctc ggccagctag acgatacgtt
     1141 gaaagtcgtg ctcgattacg cgcgtgcgca tcccgagacg ctcgtgctcg tgacggccga
     1201 tcacagccag gcggcgcagc tcgttcccga gacgagcgtg ctcgcggctc tgaacgcggc
     1261 gagccccggc tacttcgcgc gcgtgcgcac gccggagggc ggcgtgatgg gcgtcagcta
     1321 tgcgacgaac gactcgaata tccaggaaga ccacaccggt gcggacgtgc cgctgttcgc
     1381 gagcggcccc ggcgccgacg agatcccatc gtcgctgcgt cagcccgaga tcttcggggt
     1441 aatgttgcgt catctcggcc tgagtgcgcc gcggtagtcg atgccggcca aatgcctgag
     1501 cctcggcgag ctcgaggccg gtcttccgga gatccggcgt tcgccgcgcg agcaaggtac
     1561 gctcgcgctg atcgtgtgcc gcccgcgacg cggcgagcgc gaggttctcg aaaccgcgga
     1621 gctcgacagc gaggccgggc tcgtcggcg
//
LOCUS       DATCUD010000599         2097 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34304, whole genome shotgun sequence.
ACCESSION   DATCUD010000599 DATCUD010000000
VERSION     DATCUD010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2097
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34304"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            48..1370
                     /locus_tag="VIQ99_08720"
     CDS             48..1370
                     /locus_tag="VIQ99_08720"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9183268.1"
                     /translation="MNGRSLRVLLSSVLLGIAQGCVQSTAPEPAASRASDAVPTAAPP
                     TADPLVFDTWVPGPCSPNGQSQGQCPPGELFRVRLVPVAEGLTNPRNISFMPNGDALV
                     TELAGRVRLIRDGRLVPEALGGWPVEGLEAGALQAVVVHPQFETNRYVYLYYVKNRED
                     AMTSFGLARARLSGSELEDVQEIFVADAWIQGGPLAGRAVFGPDGMIYLTLNDHDKNN
                     AIDDPSIRIFAQHLDSDVGKNLRLRDDGSIPPDNPFVGRDDANPQIFTYGHRNTTDFA
                     WHPTTGEIWATEIGPMGGDELNILHAGHNYGWPLVSLGKLYNKNDINDNHWYRPGMDM
                     PFMYWTPSISPNSLTWYTGDKLPPWQGHLFIGALNGQMLQRIAFDQPAPQAERRDSLF
                     MSLGRRWRHVEQGPDGFLYGVTEKRTLGTPPDPNDATSGVVYRIEPAD"
     gene            1382..1774
                     /locus_tag="VIQ99_08725"
     CDS             1382..1774
                     /locus_tag="VIQ99_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010112296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9183269.1"
                     /translation="MTVVALDHYNLRAPRPFLEELRDFYSDVVGLTVGDRPPFTSFGY
                     WLYSGERPVLHLSETRAGEARSRSAVNTFSHAAFNCTGRAEFERRLRERGIEYRIAQV
                     PLLGIDQLFFHDPAGNGVELQFDAAERS"
     gene            complement(1785..>2097)
                     /locus_tag="VIQ99_08730"
     CDS             complement(1785..>2097)
                     /locus_tag="VIQ99_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005408835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183270.1"
                     /translation="ANLSLGILISTLTRTQFQAMQVSFFSFLPQILLSGFMFPFAGMP
                     IAAQYFAEILPLTHFLRLVRGIMLRGATLTELWHSVVALGVIVVVMLAIAVSRVHKRL
                     D"
BASE COUNT          387 a          685 c          688 g          337 t
ORIGIN      
        1 tttcgacggc gccgacacgt ggaaatacct ggattgaggg gaagagcatg aatggccgtt
       61 cgctgcgcgt gttgctgtcg tcagtgttgc tgggcatagc ccaggggtgc gtgcagagca
      121 cggcgccgga gcctgcagcg agcagggcgt ccgatgcagt tccgaccgcg gcaccgccca
      181 cagccgaccc gctcgtgttc gacacctggg tgcctgggcc gtgctcaccg aacggtcagt
      241 cgcagggcca gtgcccgccc ggcgagttgt tccgcgtacg gctggttccc gtggccgaag
      301 gcctcacgaa cccgcgcaac atctcgttca tgccgaacgg cgacgcgctc gtgaccgagc
      361 tcgcggggcg cgtccgcctg atccgcgatg gccgcctcgt gccggaggcg ctcggcggtt
      421 ggccggtcga aggcctcgag gctggcgcgc tccaggccgt cgtcgtgcat ccgcagttcg
      481 agacgaatcg ttacgtgtat ctgtactacg tcaagaaccg cgaggacgcg atgacctcgt
      541 tcgggctcgc gcgggcacgc ctctcgggca gcgagctcga ggacgtgcag gagatcttcg
      601 tcgccgatgc gtggatacag ggtggaccgc tggccggccg cgcggtattc ggccccgacg
      661 gcatgatcta cctgacgctg aacgaccacg acaagaacaa cgcgatcgac gatccgagca
      721 tccggatctt cgcgcagcat ttggacagcg acgtcggcaa gaacctgcgc ctccgcgacg
      781 acggcagcat tccgcccgat aacccgttcg tcggccgcga cgatgcgaat ccgcagatct
      841 tcacgtacgg ccatcgcaac acgaccgact ttgcgtggca cccgacgacg ggcgagatct
      901 gggccaccga gatcgggccg atgggcggcg acgagctgaa catcctgcat gcgggccaca
      961 actacggttg gccactcgtg tcgctcggca agctgtacaa caagaacgac atcaacgaca
     1021 accactggta tcgacccggc atggacatgc cgttcatgta ctggacgccg tcgatcagcc
     1081 cgaactcgct gacgtggtac accggcgaca agcttccgcc gtggcagggc catctcttca
     1141 tcggcgcgct gaacgggcag atgctgcagc gcatcgcgtt cgatcagccg gcgccgcagg
     1201 cggagcgccg cgactcgctg ttcatgtcgc tggggcgcag atggagacac gtggagcaag
     1261 ggccggacgg ttttctttac ggcgtgacgg agaagcgtac gctcggtacg ccgccggatc
     1321 ccaacgatgc gacgagcggc gtcgtgtatc gcatcgaacc ggccgactga ggaattcggt
     1381 catgaccgtc gtcgctttgg accattacaa cctacgtgcc ccgcggccgt tcctggagga
     1441 gctacgcgac ttctatagcg acgtcgtcgg gctcacggtc ggcgaccgac cgccttttac
     1501 gagcttcggc tactggctct actccggcga acgccccgtg ctgcacctga gcgaaacccg
     1561 cgccggcgag gcgcggtcgc gctcggccgt caacacattt tcgcacgccg cgttcaactg
     1621 cacgggccgc gccgagttcg agcggcgctt gcgcgagcgc ggtatcgagt atcggatcgc
     1681 acaggtaccg ctgctcggca tcgaccagct gttcttccac gatcccgccg gcaacggcgt
     1741 ggagctccag ttcgacgccg cggagcgctc ctagagtcga agcatcagtc gagccgcttg
     1801 tgcacgcgcg agaccgcgat cgcgagcatc acgacgacga tcaccccgag cgcgactacc
     1861 gagtgccata gctccgtgag cgtggcgccg cgcagcatga tgccgcgcac gaggcgcaaa
     1921 aaatgcgtga gcggcaggat ctcggcgaag tactgcgccg cgatcggcat gcccgcaaac
     1981 ggaaacatga agcccgacag cagaatctgc ggcaggaacg agaagaacga gacttgcatc
     2041 gcctgaaact gcgtgcgtgt cagcgtcgag atcaggatgc cgagcgacag gttggcc
//
LOCUS       DATCUD010000600         2767 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77119, whole genome shotgun sequence.
ACCESSION   DATCUD010000600 DATCUD010000000
VERSION     DATCUD010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77119"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..927
                     /locus_tag="VIQ99_08735"
     CDS             <1..927
                     /locus_tag="VIQ99_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020401376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008241 - peptidyl-dipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M2 family metallopeptidase"
                     /protein_id="HEY9183271.1"
                     /translation="VTQGYDEKRMVETAEGFYTSLGLPALPDTFWERSLLTRPRDREV
                     VCHASAWDLDAREDLRIKQCIQINAEHFQTVHHELGHNYYQRAYQDQSTLFRGGAHDG
                     FHEAIGDFVALNGTPEYLADIGIIQREQIPPASADLNLLLEQALNKIAFLPFALTMDQ
                     WRWRVFRGEVTPAEYNAEWWRLREQYQGIRAPGTRPADAFDPGAKYHIANNVPYLRYF
                     LSYVLQFQFYEAACKQAGWEGPLHRCTVYGNAEIGARFERMLAMGRSQPWPDALEAFT
                     GTRTMDGAAMVAYFEPLMTWLQEQNRGRTCGW"
     gene            complement(965..1426)
                     /locus_tag="VIQ99_08740"
     CDS             complement(965..1426)
                     /locus_tag="VIQ99_08740"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017246261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEY9183272.1"
                     /translation="MRFLELRIPPPVVGLIIAAGMWAVARVTPLLPLPRLVRLFVAAL
                     LLAIGLAVALGGVVSFRRARTTVNPLKPETTVTLVATGVYSFTRNPMYLGMVLVLLAW
                     TVFLASPWTLAGPALFALYITRFQIVPEERVLAELFGNSFAAYRKRVRRWI"
     gene            complement(1448..>2767)
                     /locus_tag="VIQ99_08745"
     CDS             complement(1448..>2767)
                     /locus_tag="VIQ99_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183273.1"
                     /translation="PMFLWFVGYVLILRFFVPRLRELSRVSSEGRSLVMGRVVDSYTN
                     ILTVKLFGRMRDEDAYVRDAMDGHYGAMRKHLAMITRFQFLLTVLNALLLVSTATIGL
                     TLWARGGLDAAMVATALPLAWQTVTAAGWVSWEVTSIFENIGTVQEGMQSIAVPHMGV
                     DRIGARPLVVTRGEIKFEHLTFAYGRADSEPVIKDLTLTIRPGERVGLVGRSGAGKST
                     LVNLLLRLHEAELGRITIDGHDIAHATQESLRAAIGMVTQDTSLLHRSIAANIRYGKP
                     NASEAEVVAAARKAQAHDFILGLRDWHGRTGYAAHVGERGVKLSGGQRQRIALARVIL
                     KDAPILVLDEATSALDSEVELAIQEQLLDLMQGKTVIAIAHRLSTIARMDRLVVLEAG
                     RIVEEGTHAELLRLGGHYENLWRHQSGGFIANELDEGEAPAARNAVG"
BASE COUNT          507 a          936 c          897 g          427 t
ORIGIN      
        1 gtcacgcaag gctacgacga gaagcgcatg gtcgagacgg ccgagggctt ctacacgtcg
       61 ctgggcctgc cggcattgcc ggacacgttc tgggagcggt cgctgctgac gcgcccgcgc
      121 gaccgcgagg tcgtgtgcca cgcctcggca tgggatctcg acgcgcgcga ggacttgcgc
      181 atcaagcagt gcatccagat caacgccgag cacttccaaa cggtgcacca cgagctcggc
      241 cacaactact accaacgcgc gtatcaggat cagtcgacgc tgttccgcgg cggtgcccac
      301 gacggcttcc acgaggcgat cggcgatttc gtcgcgctga acggcacgcc cgagtacctc
      361 gccgacatcg gcatcattca gcgcgagcag attccgccgg cgagcgcaga cttgaatctg
      421 ttgctcgagc aggccctgaa caagatcgcg ttcctgccgt tcgcgctcac gatggatcaa
      481 tggcgctggc gcgtgttccg cggcgaggtc acgccggccg agtacaacgc ggagtggtgg
      541 cgcttgcgcg agcagtatca gggcatccgc gcgccgggca cgcgaccggc ggacgcgttc
      601 gaccccggcg cgaaatacca catcgcgaac aacgtgcctt atctccgcta cttcctctcg
      661 tacgtgctgc agttccagtt ctacgaagcc gcgtgcaagc aggccggatg ggaaggcccg
      721 ttgcaccgct gcaccgtgta cggcaatgcc gagatcggtg cgcgtttcga gcgcatgctc
      781 gcgatgggca ggtcgcagcc atggcccgac gcactcgagg ccttcacggg cacgcgcacg
      841 atggacggcg ccgcgatggt cgcctacttc gagccgttga tgacgtggct acaggagcag
      901 aaccgcggcc gcacctgcgg ctggtgaccg ccgccaccga agctacgaaa cacgggtcaa
      961 gccttcagat ccagcgccga acccgttttc tgtaggcagc gaacgagttg ccgaacagct
     1021 ccgcgagcac gcgctcctcg gggacgatct gaaatcgcgt gatgtacagc gcgaacagcg
     1081 ccgggccggc cagcgtccac ggggacgcaa ggaacacggt ccaggccaac agcaccaata
     1141 ccatgccgag atacatggga ttgcgggtga acgagtagac gccggtcgca accagcgtca
     1201 ccgtcgtctc cggcttcaac ggattgaccg tagtccttgc gcggcgaaag gagaccactc
     1261 cgccgagagc gacagcaagt ccgattgcaa gcagtaatgc cgcgacgaac agtcggacca
     1321 gcctcggcag cggcagcagt ggagtaaccc gtgcaacggc ccacatgccg gcggcgatga
     1381 tcaatcccac gacggggggt ggaatccgta gctcgaggaa tcgcacgcgg ggagtccctg
     1441 gcctcggcta gccgaccgcg ttccgcgcag ccggcgcctc gccctcgtcg agctcgttcg
     1501 cgatgaaccc gcccgactgg tggcgccaga ggttctcgta gtgcccgccg aggcgtagga
     1561 gctccgcgtg tgtgccctcc tcgacgatgc gcccggcctc gagcacgacc aatcgatcca
     1621 tgcgcgcgat cgtcgacagg cggtgcgcga tcgcgatcac ggtcttgcct tgcatgagat
     1681 ccagcagctg ttcctgaatc gcgagctcga cctcgctgtc gagcgcggac gtcgcctcgt
     1741 cgagcaccaa aatcggcgcg tccttcagga tcacgcgtgc gagcgcgatg cgctggcgct
     1801 gcccgcccga gagcttcacg ccgcgctcgc cgacatgggc cgcatagccg gtgcggccgt
     1861 gccaatcgcg taggcccaag atgaaatcgt gggcctgggc cttgcgtgcg gcggcgacga
     1921 cctcggcctc ggatgcgttc ggcttaccgt aacggatgtt cgcggcgatc gagcggtgca
     1981 gcagcgacgt gtcttgcgtg accatgccga tcgcggcgcg caagctctcc tgcgtcgcgt
     2041 gcgcaatgtc gtggccgtcg atcgtgatgc gccccagctc cgcctcgtgc aagcgcaaca
     2101 gcaaattcac gagcgtggac ttgccggcac ccgagcggcc gacgaggccc acgcgctcgc
     2161 cgggccggat cgtcagcgtc aggtccttga tcacgggctc ggaatcggcg cgcccatacg
     2221 cgaacgtcag atgctcgaac ttgatctcgc cgcgcgtcac gaccaacggc ctggcgccga
     2281 ttcgatcgac gcccatgtgc ggcacggcga tcgactgcat gccctcctgc acggtgccga
     2341 tgttctcgaa gatcgaggtc acctcccagc taacccaccc tgcagccgtg accgtctgcc
     2401 atgcgagcgg cagcgccgtc gcgaccatcg cggcatcgag cccgccgcga gcccagagcg
     2461 tgaggccgat cgttgccgtg ctcacgagca gcagagcgtt caacaccgtc agcaagaact
     2521 ggaagcgcgt gatcatcgcg aggtgcttgc gcatggcgcc gtagtgcccg tccatggcgt
     2581 cacggacgta ggcgtcctcg tcgcgcatgc ggccgaacag cttgaccgtc aggatgttcg
     2641 tatagctgtc gacgacgcgg cccatcacga gcgaacggcc ctccgagctc acgcgcgaga
     2701 gctcgcgcag ccggggcacg aagaatcgca ggatcaggac gtagccgacg aaccacagga
     2761 acatcgg
//
LOCUS       DATCUD010000601         2046 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62370, whole genome shotgun sequence.
ACCESSION   DATCUD010000601 DATCUD010000000
VERSION     DATCUD010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62370"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1599)
                     /locus_tag="VIQ99_08750"
     CDS             complement(<1..1599)
                     /locus_tag="VIQ99_08750"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183274.1"
                     /translation="MRIAAIAALAVLTLQHATAASPEAERLIGDVARAMGGADAILGI
                     RTLRADGYGVEAYFWGGGNITADREAPQKWAENPTFSSIWDFENDRYRTQYRHNFLFP
                     FGGTFGHSFSLSSWGVDRGVGYTIAPQGAGTRLAEWTTGGAWFKPDGTRFRTYESLSH
                     PLAAVRAVLRGRAAPENLRVENGVTVVDVVIDEGHVSLGIEPRTLLPRWVRWAAPHQN
                     LGEVMITTTFVGYQNFDGVQLPFTWSSRIDWRNTLVQTRILDGYYINSDKTPDIAAPA
                     AVLEQPQPPAAPPAAPITVTKIADGLWHFNHGGHTVIEFADHLVIFEMGGTAAQARAA
                     IALANTLVPGKRLTHLIVSHHHFDHTLGFRAAVEAGLTVISHWGNEEILTDMATRPAP
                     NFAGLVPNPTGVQLKFVPVSGHLRLQDERMTLDLYEVVKHNHMANAVFAFAPKSRTFI
                     EADLATPANQFSFWAEAYEDNLEHYGLEVDMVSPNHVARPMTHEETLEWIAEGVPRAL
                     ARCDELAALGRPVPGCPPYIYRDWG"
     gene            complement(1600..>2046)
                     /locus_tag="VIQ99_08755"
     CDS             complement(1600..>2046)
                     /locus_tag="VIQ99_08755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183275.1"
                     /translation="AWFEDLARRRVEAFPDALSRSPKPIKTRAVDDHLRLSDSKLTVD
                     VYRVVSNNHMAHGLLAYVPEHRLLIQGDLFDLNWEVYFWGNTYDDNVAYRKLDVERDV
                     PIHGRVLPIAEVHAKLAEQKRNAEQLCARVESAGLSMPGCPLAWND"
BASE COUNT          331 a          677 c          689 g          349 t
ORIGIN      
        1 gccccaatcg cggtagatgt acggcgggca gcccggcacg gggcggccga gcgccgcgag
       61 ctcgtcgcac cgcgcgagcg cacgcggcac accttccgcg atccactcga gcgtctcctc
      121 gtgcgtcatc ggccgcgcga cgtgattcgg ggacaccata tccacttcca gcccgtagtg
      181 ctcgaggttg tcctcgtagg cttcggccca gaacgagaat tggttggccg gcgtcgcgag
      241 atcggcctcg atgaacgtgc ggctcttcgg cgcgaatgcg aacaccgcgt tcgccatgtg
      301 gttgtgcttg acgacctcgt agagatccag cgtcatgcgc tcgtcctgca gacgcaagtg
      361 gccggacacg gggacgaact tcagctgcac gccggttgga ttcgggacga gacctgcgaa
      421 gttcggcgcc ggccgcgtgg ccatgtcggt cagaatttcc tcgttgcccc aatgcgagat
      481 gacggtcagc cccgcctcga cggccgctct aaacccaagc gtgtggtcga aatggtgatg
      541 cgacacgatg agatgcgtga ggcgcttgcc gggcacgagc gtgttcgcaa gcgcaatggc
      601 ggcgcgcgcc tgcgcggccg tgccgcccat ctcgaagatc acgagatggt ccgcgaactc
      661 gatgacggta tggccgccgt ggttgaagtg ccagagcccg tcggcgatct tcgtcaccgt
      721 gatcggggcc gccggcggcg ccgcgggagg ttgcggctgc tccagcacgg cggcgggcgc
      781 cgcaatgtcc ggggtcttgt cggagttgat gtaatagccg tcgaggatcc gcgtttggac
      841 cagcgtattg cgccagtcga tgcgagacga ccacgtgaac ggcagctgca cgccgtcgaa
      901 attctggtag ccgacgaagg tcgtcgtgat catgacctcg ccgagattct ggtgcggcgc
      961 cgcccatcgg acccagcgcg gcaacagcgt ccgcggctcg atgccgagcg agacgtggcc
     1021 ttcgtcgatc acgacgtcga cgaccgtcac gccgttttcg acccgcaggt tctccggagc
     1081 ggccctgccg cggaggaccg cgcgcactgc cgccagcggg tggctcaacg actcgtacgt
     1141 gcggaagcgc gtgccgtccg gcttgaacca cgcaccgccg gtcgtccact cggcgagccg
     1201 cgtgcccgcg ccttgcggcg caatcgtgta gccgacgccg cggtcgacgc cccacgacga
     1261 caacgagaag ctgtgcccga aggtgccgcc gaacgggaac aggaagttgt gtctgtactg
     1321 cgtgcgatac cggtcgttct cgaagtccca gatcgacgag aaggtggggt tctcggccca
     1381 cttctgcggc gcctctcgat cggcggtgat gttgcctcca ccccagaaat acgcctccac
     1441 tccgtagccg tcggcccgta gcgtacggat gccgagaatg gcgtcggccc cgcccatcgc
     1501 gcgcgcgacg tcaccgatca agcgctcggc ttcgggcgat gctgcggtgg cgtgctgcag
     1561 cgtcagcacc gcgagcgctg cgatcgccgc gatgcgcact caatcgttcc aggcgagcgg
     1621 gcagcccggc atcgacaggc ccgcggattc gacccttgca cacagctgct ccgcgttgcg
     1681 cttttgctcg gcgagcttgg cgtgcacttc ggcgatcggc aatacgcgcc cgtggatcgg
     1741 cacgtcgcgc tcgacatcga gcttgcgata cgcgacgttg tcgtcgtacg tgttgcccca
     1801 gaaatagacc tcccagttca ggtcgaacag gtcgccctgg atcagcaggc ggtgctcggg
     1861 cacgtaggcc agcaggccgt gcgccatatg gttgttcgac accacgcggt acacgtcgac
     1921 cgtgagcttc gagtcgctga gccgcagatg atcgtcgacg gcgcgcgtct tgatcggctt
     1981 cgggctgcgg cttagcgcat ccggaaacgc ctcgacgcgg cggcgagcga gatcttcgaa
     2041 ccacgc
//
LOCUS       DATCUD010000602         1970 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_84071, whole genome shotgun sequence.
ACCESSION   DATCUD010000602 DATCUD010000000
VERSION     DATCUD010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84071"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /gene="tgt"
                     /locus_tag="VIQ99_08760"
     CDS             complement(<1..823)
                     /gene="tgt"
                     /locus_tag="VIQ99_08760"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019642235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEY9183276.1"
                     /translation="MRFELLQEDGRARRGRITFRRGVIDTPAFMPVGTYGAVKAMTPE
                     ELEGLGAQIILGNTFHLLLRPGIDVIRAHGGLHAFMHWQRPILTDSGGFQVFSLKTLR
                     KITERGVEFRSPVNGDLIELTPERSIEMQHALGSDIVMVFDECTEYPADHETARQSMQ
                     LSLRWARRSRAAFDAAKRGEDSDAALFGIVQGGVHDDLRRESLAGLVEIGFQGYAVGG
                     LAVGEPEHERLQVLEGMAPALPVDHPRYLMGVGTPADLVKAVARGMDMFDCVIPTR"
     gene            complement(813..1862)
                     /gene="queA"
                     /locus_tag="VIQ99_08765"
     CDS             complement(813..1862)
                     /gene="queA"
                     /locus_tag="VIQ99_08765"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013716870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEY9183277.1"
                     /translation="MLRSDFHYDLPPELIAQAPLAERRASRLLVLDGATGAVADRTFA
                     ELPELLRTGDLLVLNDTRVLPARVLGRKPTGGRVECLLERLLGPRRALVHLRASHTPQ
                     PGSEIDLPGRARARVVARAGELFEITLDRDFVPFLEAHGQTPLPPYIVRAPDDSDRER
                     YQTVFARAAGAVAAPTAGLHFDRAIFDALAARGVERTFVTLHVGAGTFAPVRTERVED
                     HELHAEWLEVSADTCTAVERCRTRGARVVAVGTTSVRALETAARGGRLAPLAGDSRLF
                     IYPGFEFRVVDAIVTNFHLPESSLLMLVAAFAGREATLAAYRHAVEERYRFFSYGDAM
                     FVTPQPAARRGTHAV"
BASE COUNT          353 a          681 c          652 g          284 t
ORIGIN      
        1 gccgcgtcgg aatcacgcag tcgaacatgt ccatgccgcg cgcgacggcc ttcacgagat
       61 cggccggtgt gccgacgccc atcagataac gcgggtgatc gacgggaaga gccggggcca
      121 tgccttcgag cacttgcagc cgctcgtgct ccggctcgcc gaccgcgaga cctccgaccg
      181 cgtagccctg aaaaccaatc tcgacgaggc ccgcgagcga ctcgcgccgc agatcgtcgt
      241 gcacgccgcc ttgcacgatg ccgaacagcg ccgcgtccga gtcctcaccg cgtttcgctg
      301 cgtcgaacgc ggcgcggctg cgcctggccc agcgcaacga cagctgcatc gattgccgag
      361 ccgtctcgtg atcggccgga tactccgtgc attcgtcgaa caccatcacg atgtccgagc
      421 cgagcgcgtg ctgcatctcg atggagcgct cgggcgtgag ctcgatcaga tcgccgttca
      481 cgggagagcg aaactcgacg ccgcgctccg tgatcttgcg cagcgtcttc aagctgaaaa
      541 cttggaaccc gcccgagtcc gtgaggatcg gccgttgcca atgcatgaac gcgtgcaaac
      601 cgccgtgcgc gcgaatcacg tcgatgccag gccgcagcag cagatgaaac gtgttgccga
      661 gaatgatctg cgcgccgagc ccttcgagct cctcgggcgt catggccttg acggctccgt
      721 acgtaccgac cggcatgaac gccggcgtgt cgatgacgcc gcggcgaaac gtgatccgac
      781 cgcggcgagc acggccatcc tcttgcagca actcaaaccg catgcgtgcc tctgcgggcc
      841 gcgggctgcg gcgtcacgaa cattgcgtca ccgtagctga aaaagcgata gcgctcctct
      901 acggcgtgac gatacgcggc gagcgtcgct tcccgccccg caaacgcggc cacgagcatc
      961 agcagcgacg actccggcaa atggaagttc gtgacgatcg cgtcgacgac gcgaaactcg
     1021 aagcccggat agatgaaaag tcggctgtcg ccggccaagg gcgccaggcg tccgccgcgc
     1081 gccgccgtct cgagcgcacg cacgctcgtc gtgccgaccg ccacgacacg ggcaccgcgc
     1141 gtgcggcaac gctcgacggc cgtgcacgtg tccgcggaaa cctcgagcca ctctgcgtga
     1201 agctcgtgat cttccacacg ctcggtgcgc acgggagcga acgttccggc accgacatgc
     1261 agcgtcacga acgtgcgctc gacgccgcgt gccgcaaggg cgtcgaaaat cgcgcgatcg
     1321 aaatgcagcc cggctgtcgg tgcggcgacg gccccggcgg cgcgcgcaaa cacggtctga
     1381 taccgttcgc gatccgaatc gtcgggcgcg cgaacgatgt acgggggcaa cggggtctga
     1441 ccgtgagctt cgaggaacgg aacgaagtct cggtcgagcg tgatctcgaa tagctcgccc
     1501 gcgcgggcca cgactcgcgc tcgggcacgg cccggcagat cgatctcgct ccccggctgc
     1561 ggcgtgtgac tcgcgcgcaa gtgcacgagc gcgcgacgcg gaccgagcaa ccgctcgagc
     1621 aggcattcga cgcgcccgcc cgtgggcttg cgccccaaga cgcgcgccgg gagcacgcgc
     1681 gtgtcgttca gtacgagcaa atcgccggtc cgcaatagct ccggcagctc ggcgaaggtg
     1741 cgatcggcga ccgcgccggt cgcgccgtcg agcacgagca agcggctcgc gcgccgctcc
     1801 gcgagcggcg cttgcgcgat cagctcgggc ggcaggtcgt agtggaaatc gctgcgaagc
     1861 aagatagtgg tgcccgaggt cggagtcgaa ccgacacgct tattaggcgg cggattttcg
     1921 cgccacttcg gctttcgccg cccgcgcaag ccaaagccgc gaggttcgtg
//
LOCUS       DATCUD010000603         2392 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70093, whole genome shotgun sequence.
ACCESSION   DATCUD010000603 DATCUD010000000
VERSION     DATCUD010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70093"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /locus_tag="VIQ99_08770"
     CDS             <1..793
                     /locus_tag="VIQ99_08770"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092838.1"
                     /note="catalyzes the interconversion of D-xylose to
                     D-xylulose; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HEY9183278.1"
                     /translation="EATHRLGGANYVLWGGREGYETLLNTDLRRELDQLGRFLSLVVD
                     YKHKIGFKGTILVEPKPQEPTKHQYDFDVASVYGFLKRYGLEREVKVNIEHGHAVLAG
                     HSFDHEIALANALGIFGSIDMNRNDYQSGWDTDQFPNNVQDTALAYYQILRGGGFTTG
                     GTNFDAKLRRQSIEPVDLLIGHIGAMDTCARALIAAAGMLEDGALETPLRERYAAWET
                     ADAKQLLAGEISLAEIEQRVAAKGADPQPRSGRQELLENIVSRYV"
     gene            811..1869
                     /locus_tag="VIQ99_08775"
     CDS             811..1869
                     /locus_tag="VIQ99_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018633997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEY9183279.1"
                     /translation="MRTIKGPGIFLAQFAGDKAPFNSWDSITRWAADCGYVGVQVPSW
                     DARLFDLDKAATSKTYCDEILGVARANGVAVTELSTHLQGQLVAVHPAYDDAFDGFAA
                     PHVRGNPKARTEWAVDQVKKCLTASKNLGLNAMATFSGALAWPYFYPWPQRPAGLVET
                     AFDELARRWKPILGHAEDCGVDCCFEIHPGEDLHDGVTYEMFHERTGKHARACMLFDP
                     SHYVLQCLDYLEHIDIYHERIRMFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSTGD
                     GQVDFTSIFSKFAAYGFRGWAIVEWECALKHPEDGAREGAKFVREHIIRVTERAFDDF
                     AGAGTDDAANRRMLGISR"
     gene            1866..>2392
                     /locus_tag="VIQ99_08780"
     CDS             1866..>2392
                     /locus_tag="VIQ99_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018689019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY9183280.1"
                     /translation="MTIEGKAERRTPRIRLGMVGGGIDAFIGAVHRIAARLDDKFELV
                     AGALSSTPERARKSGAALGLDPERTYSDFKQMAVRESRLNDGIEAVAIVTPNHLHYPV
                     AREFLKRGIHVICDKPLTATLADAKKLAKLVDGGDALFVLTHNYTGYPMVRHARELVR
                     AGEIGTIRVVQVEYA"
BASE COUNT          439 a          781 c          801 g          371 t
ORIGIN      
        1 cgaggccacg caccggctcg gcggcgcgaa ctacgtgctg tggggcggcc gcgaaggcta
       61 cgagacgctg ctgaacacgg acttgaggcg tgagctcgat cagctcggcc gcttcttgag
      121 cctcgtcgtc gactacaagc acaaaatcgg gttcaagggc acgattctcg tcgagccgaa
      181 gccgcaggag cccacgaagc accagtacga tttcgacgtc gcgtccgtct acggcttctt
      241 gaaacgctac gggctcgaac gcgaggtcaa ggtcaacatc gagcacggcc acgccgtgct
      301 cgcgggacac tcgttcgatc acgagatcgc gctcgcgaac gcgctcggga tcttcggctc
      361 gatcgacatg aaccggaacg actaccaatc cggctgggac accgaccagt tcccgaacaa
      421 cgtgcaggac accgcgctcg cgtactatca gatcttgcgc ggcggcggct tcacgacggg
      481 cggcacgaac ttcgacgcga aactgcgccg tcagtcgatc gagcccgtcg atctcctgat
      541 cgggcacatc ggcgcgatgg acacctgcgc ccgcgcgctg atcgcagccg ccgggatgct
      601 cgaggacggc gcgctcgaaa cgccgctgcg cgagcgttac gcggcgtggg aaacggcgga
      661 cgccaagcag ctgctggccg gcgagatctc gctcgccgag atcgagcaac gtgtggccgc
      721 gaaaggcgcc gatccgcagc cgcgctcggg acggcaggaa ttgctcgaaa acatcgtgag
      781 ccgctacgtc tgaggcagcg ggggaagcac atgagaacga tcaagggccc cgggattttt
      841 ctggcgcagt tcgccgggga caaagccccg ttcaactcgt gggactcgat cacgcgctgg
      901 gccgcggact gcggctacgt cggcgtgcag gtgccgagct gggacgcgcg cttattcgac
      961 ctcgacaagg cggcaacatc gaagacctac tgcgacgaga tcttaggtgt agcgcgcgcg
     1021 aacggcgtcg cggtcaccga gctctcgacg cacctgcagg gccagctcgt ggccgtgcac
     1081 ccggcctacg acgatgcatt cgacggcttc gcggcgccgc acgtgcgcgg caacccgaag
     1141 gcgcgaaccg agtgggccgt cgatcaggtc aagaagtgcc tgactgcgtc gaaaaacttg
     1201 gggctgaacg cgatggcgac gttttcgggc gcgctcgcct ggccgtactt ctatccgtgg
     1261 ccgcaacgcc ccgcgggcct cgtggagacg gcgttcgacg agctcgcgcg gcgctggaag
     1321 ccgatcttgg gtcacgccga ggactgtggc gtcgactgct gcttcgagat ccaccccggc
     1381 gaggatctgc acgacggcgt gacctacgag atgttccacg agcgcaccgg caagcacgcg
     1441 cgcgcgtgca tgctgttcga cccctcgcac tacgtgctgc agtgtctcga ttacctcgag
     1501 cacatcgaca tctatcacga gcggatccgg atgtttcacg tcaaggacgc cgagttcaac
     1561 ccgaccggac gccaaggcgt gtacggtggc tatcagagct gggtgaatcg cgccggccgg
     1621 tttcgttcca ccggcgacgg gcaagtcgac ttcacgtcga tcttctcgaa gttcgccgcg
     1681 tacggattcc ggggttgggc catcgtcgaa tgggagtgcg cgttgaagca ccccgaggac
     1741 ggcgcacgcg agggagcgaa gttcgtgcgc gagcacatca tccgcgtgac cgagcgcgcg
     1801 ttcgacgatt tcgccggcgc cggcacggac gacgccgcga accgccgaat gctcgggatc
     1861 tcgcgatgac gatcgagggc aaagccgagc ggcgcacgcc gcgtattcgg ctcggcatgg
     1921 tcggcggcgg catcgacgcg ttcatcggcg cggtgcatcg gatcgcggcg cggctcgacg
     1981 acaagttcga gctcgtggcc ggcgcgctgt cgtcgacgcc ggagcgcgcg cgcaaatccg
     2041 gcgccgcgct cgggctcgac ccggagcgca cctacagcga cttcaagcaa atggccgtcc
     2101 gcgagtcgcg cttgaacgac ggcatcgagg cggtcgcgat cgtaacgccg aaccacctgc
     2161 actaccccgt cgcgcgcgag ttcttgaagc gcggcattca cgtgatctgc gacaagccgc
     2221 tcacggcgac gctcgcggac gcgaaaaagc tcgcaaagct cgtcgacggc ggcgatgctc
     2281 tattcgtcct cacgcacaac tacacaggct atccgatggt tcggcatgcg cgcgagctcg
     2341 tgcgcgccgg cgagatcggc acgattcgcg tcgtgcaggt cgagtacgcg ca
//
LOCUS       DATCUD010000604         3205 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_12864, whole genome shotgun sequence.
ACCESSION   DATCUD010000604 DATCUD010000000
VERSION     DATCUD010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3205
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12864"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            81..815
                     /locus_tag="VIQ99_08785"
     CDS             81..815
                     /locus_tag="VIQ99_08785"
                     /inference="COORDINATES: protein motif:HMM:NF017551.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NRDE family protein"
                     /protein_id="HEY9183281.1"
                     /translation="MCLVIVAVDVSRRYPLMIAANRDEQHARPATAAAWWADRPQLFA
                     GRDLAAGGTWLAVDRRGRLAAVTNIRESRREVAPRSRGALVTEFVAGQDSAAAYAARA
                     ARDGPEYGAFNLLLHDGRELHYSSNRAAPAALGAGLHAFSNAPREVEWPKLASARAAV
                     LRVAGEEAPIEPLFAMLAERGPDGTGEERYRTAHFVVGRNYGTRCSTVVLIASSGHVT
                     VAERTFDSGGRPSGETRETFGVAAPG"
     gene            complement(812..1504)
                     /locus_tag="VIQ99_08790"
     CDS             complement(812..1504)
                     /locus_tag="VIQ99_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003801843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9183282.1"
                     /translation="MRPPSSFANSLLETIDIETSPDPELAVIWLHGLGADGHDFEPIV
                     PALGLRMPVRFVFPHAPVRQVTINGGMPMRAWYDVFGWGRNVPEDSAGIRASAAAVTR
                     LIDREVDRAIPSERIVLAGFSQGGAIALHTALREPRRLAGVLALSTYLPLAGSLAAER
                     TQANAAVPIFMAHGTDDALLPLALAETSRRALEAQGYAVDWHVYPMAHTVSMEEVAAI
                     GAWLATLAKSLA"
     gene            1571..2035
                     /locus_tag="VIQ99_08795"
     CDS             1571..2035
                     /locus_tag="VIQ99_08795"
                     /inference="COORDINATES: protein motif:HMM:NF014864.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HEY9183283.1"
                     /translation="MPSAILEQNERRRAIARLLAERVVNRQAELVELLRAEGYLATQS
                     SVSRDLRDLGAAKLKNGYSLPKPAEVGDEESLQVVAESVRDIRPAGPNLLVVTTAIGA
                     AQRVAVMLDRIGWPEIVGTLSGDDTIFVATIGSNEQRRLRGRLRQHLKKAPT"
     gene            2032..>3205
                     /gene="argG"
                     /locus_tag="VIQ99_08800"
     CDS             2032..>3205
                     /gene="argG"
                     /locus_tag="VIQ99_08800"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005033397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY9183284.1"
                     /translation="MTSASNPIVLAFSGGLDTSFCVPWLTETYKRPVVTVTVNCGGID
                     AAAARQLDERARALGAVDHRLIEARPEFFDKVIKFLIMGNVRRGNLYPLCVGAERGLQ
                     AKYLAQLAKELGSDTVAHGCTAAGNDQVRFEIVLKAVAPELVILAPVRDHSWQRPAQV
                     KFLEERKMPVPMRGSAYSTNRGLWGVTIGGTETLDSKGSIPESAWVLSAGALDKPQPA
                     SEIEIEFTRGVPVALDGALLDPVALIEKLETLGARYGIGRGIHLGDTIIGTKGRVAFE
                     APAAEILISAHRELEKLTLTHTQTLVKEPVSQTYGQFIHEGKQLDPACRDIEALFLSS
                     QTRVTGKVRVQLRPCSLFVLGVTSPHSLMAVSRGKYGEAAGEWTPADAHGFSKIMAL"
BASE COUNT          560 a         1047 c         1073 g          525 t
ORIGIN      
        1 gggcggcgtg tccggcctgc ctattgttcg aggaacgcgc cgacgtcgag atcgtgctca
       61 ccgcgagtta gcatgcgccg atgtgtctcg tcatcgttgc cgtcgatgtg tctcgacgtt
      121 acccgctcat gattgcggcg aatcgcgacg agcagcacgc ccgccccgcc acggcggcgg
      181 cctggtgggc ggatcgaccg cagctgttcg ccggacgtga tctcgcggcc ggcggcacgt
      241 ggctcgcggt cgatcgccgc ggccgcctcg cagccgtgac gaacatccgc gaatcgagac
      301 gagaggttgc accgcgctcg cgcggcgcat tggtcaccga gttcgtagcc ggccaagatt
      361 ccgccgccgc ttatgccgcg cgcgcggcgc gcgacgggcc cgagtatggc gctttcaacc
      421 tgctgctaca cgacggccgc gagctccatt acagcagcaa tcgcgcagcg ccggcagcgc
      481 tcggtgcggg tttgcacgcc ttcagcaacg cgccgcggga ggtcgagtgg ccgaagctcg
      541 ccagtgctcg ggcggcggtg ctgcgcgtgg ccggtgagga agcaccgatc gagccgttgt
      601 tcgcgatgtt ggccgagcgc ggacccgatg gcacggggga ggagcgctac cgcaccgcgc
      661 acttcgtcgt cggacggaac tacggcacac gttgctccac cgtcgtgctg atcgcatcgt
      721 cgggtcatgt gaccgttgcg gagcgaacgt tcgacagcgg cggccggccg agcggcgaaa
      781 cccgcgaaac tttcggcgtc gcagcacctg gctaggcaag cgacttggcg agcgtcgcga
      841 gccaagcgcc gatcgctgct acctcttcca tcgagaccgt gtgcgccatc ggatacacgt
      901 gccagtcgac cgcgtagcct tgcgcctcga gcgcgcgtcg cgaggtttcg gccagcgcca
      961 gtggcaacaa cgcgtcgtcc gtgccgtgtg ccatgaagat cgggacggcc gcgttcgcct
     1021 gggtgcgttc ggccgcgagc gagccggcga gcggcaagta cgtcgacaga gccaacacac
     1081 cggccaaccg ccgcggctcg cgcaatgccg tatgcaacgc gatcgcgccg ccttgtgaaa
     1141 agcccgcgag gacgatgcgc tcggatggga tcgcgcggtc gacctcccga tcgatcaaac
     1201 gtgtgacggc cgccgcgctg gcgcgaatac cggcggaatc ctcgggcacg ttgcgtcccc
     1261 agccgaacac gtcataccac gcgcgcatcg gcattccgcc gttgatcgtg acctggcgca
     1321 ccggcgcatg cggaaacacg aaacgcaccg gcatccgcag cccgagagcg ggaacgatgg
     1381 gctcgaagtc gtgaccgtcg gcgccgagac cgtgtaacca aatgaccgcg agctcagggt
     1441 ccgggctcgt ctcgatatcg atcgtttcga gcagcgaatt cgcaaaggat gacggcggtc
     1501 gcataaacac ctattgccta tttgcgcata cggcctatta tatgcgcaac tttattcacg
     1561 gccgattccg atgcccagtg caatcctcga gcaaaacgag cgacgacgag ctatcgctcg
     1621 cttgctcgca gagcgcgtgg tgaaccgcca ggccgagctg gtcgagttgt tgcgcgcgga
     1681 aggttacctt gcaactcagt cgagtgtcag ccgagatctg cgcgacctcg gcgccgcgaa
     1741 actcaagaac ggctacagct tgccgaagcc ggccgaagtc ggcgacgagg aatcgctgca
     1801 agtcgtcgcg gagtccgtgc gggacattcg tccggcaggg ccgaatctgc tcgtggtcac
     1861 gaccgcgatc ggcgctgcgc agcgtgtcgc agtgatgctc gatcgcatcg gttggccgga
     1921 aatcgtcggc acgctctcgg gagacgacac gatcttcgtc gcaaccatcg gctcgaacga
     1981 gcaacgccgg ctccgcggcc ggttacgaca acatctgaaa aaggcaccga catgacttct
     2041 gcgtccaatc cgatcgtcct cgcgttctcc ggcggtctcg acacgtcgtt ctgcgttccg
     2101 tggctcacgg agacgtacaa gcgccccgtt gtaaccgtga ccgtgaactg cggtggcatc
     2161 gacgcggcgg ctgcgcggca gctcgacgag cgagcacgcg cgttgggcgc agtggaccat
     2221 cggctcatcg aggcccggcc cgagttcttc gacaaggtca tcaagttctt gatcatgggc
     2281 aacgttcgac gcggcaacct atatccgctc tgtgtcggcg cagagcgcgg gttgcaagcg
     2341 aagtacctgg cgcagctcgc gaaggagctc ggctccgata ccgtcgcgca cggctgcacg
     2401 gccgccggca acgaccaggt ccggttcgag atcgtgctga aggccgtcgc gccggagctc
     2461 gtcattctcg cgcccgtccg cgatcactcc tggcagcgcc cggcgcaagt gaagttcctg
     2521 gaggaacgga agatgccggt gccgatgcgc ggctcggcct attcgacgaa ccgcggactc
     2581 tggggcgtta cgatcggcgg caccgagacg ctcgattcga aaggcagcat ccccgaatcg
     2641 gcgtgggtgc tgtcggccgg cgccctcgac aagccgcaac cggcgagtga aatcgagatc
     2701 gaattcacgc gtggcgtgcc cgtcgcgctg gacggcgcgc tgctcgatcc cgtcgcgctg
     2761 atcgagaagt tggaaacgct cggcgcgcgt tacggcatcg gccgcggcat tcacttgggc
     2821 gacaccatca tcggcacgaa ggggcgtgtg gccttcgaag cgccggcggc cgagattttg
     2881 atctcggcac accgcgagct cgagaaactc acgttgacgc atacgcagac gttggtgaag
     2941 gagcccgtga gccaaaccta cgggcagttc atccacgagg gcaaacagct cgatccggcg
     3001 tgccgcgaca tcgaggcgct gttcttgtca tcgcagacgc gcgtcaccgg taaggtacgc
     3061 gtgcagctgc ggccgtgcag cctgttcgtg ctcggcgtca cgtcgccgca ctcgctgatg
     3121 gccgtgagcc gcggcaagta cggcgaggcg gccggcgaat ggacgccggc cgacgcgcac
     3181 ggcttctcga agatcatggc gttgc
//
LOCUS       DATCUD010000605         3937 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55802, whole genome shotgun sequence.
ACCESSION   DATCUD010000605 DATCUD010000000
VERSION     DATCUD010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3937
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55802"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="VIQ99_08805"
     CDS             complement(<1..879)
                     /locus_tag="VIQ99_08805"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY9183285.1"
                     /translation="MRVGIVVLGALGFACVARAAELPPGIQRVLTGHGIPADDVSIIV
                     QAVDAPEPLLSHLPDVSRSPASVMKVVTTWSALEYLGPAYTWPTEVYFLGGLDGEKLD
                     GDLALKGYGDPYLVVEEVWKLLRSLRRLGLKEITGDLVLDDSHFLIDEPEPGAFDGQP
                     YRTYNVVPNALLMNFKAVQFQFRADPAHDRVQVATDPVLTNLVIDNNLKLGDGPCVGY
                     QAGIAFNHADPKSLARVVLDGEFSRRCNVYGFGRTVLQHDTFAAGMFESLWREIGGEF
                     RGTVRKATIPADALPAL"
     gene            complement(944..1267)
                     /locus_tag="VIQ99_08810"
     CDS             complement(944..1267)
                     /locus_tag="VIQ99_08810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183286.1"
                     /translation="MNAWFGPDVGMWFSFLSLLSIAAALEAFAKRGKHRSAVTGVYYA
                     CLALGVALLGLGAVAALMGQPWHVVFPLLLSGVVTIPAFGWGLKTIKRAYEEAEARRI
                     VAKNL"
     gene            complement(1264..1569)
                     /locus_tag="VIQ99_08815"
     CDS             complement(1264..1569)
                     /locus_tag="VIQ99_08815"
                     /inference="COORDINATES: protein motif:HMM:NF021388.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2089 family protein"
                     /protein_id="HEY9183287.1"
                     /translation="MVPAELPTWVVSLDEDDLQLIRRFVLLSGSLKELAADYGVSYPT
                     IRARVDALIERLRLLDRNAADDVLEARVRVLVADGEMAPKLAKELLRLHREAKGAKS"
     gene            1696..2589
                     /locus_tag="VIQ99_08820"
     CDS             1696..2589
                     /locus_tag="VIQ99_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019806240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose bisphosphate aldolase"
                     /protein_id="HEY9183288.1"
                     /translation="MSTFDDQLTKIKNDKGFIAALDQSGGSTPKALKLYGIDETAWKD
                     EKGMYDVVHAMRTRIITSPAFSGKRLIGAILFENTMDRDIEGKPTPTYLWDVKGVVPF
                     LKVDKGLADEKDGVQLMKPMPDLGSLLKRAKAKNVFGTKMRSVIKQANPAGIDAVVKQ
                     QFDIGKEIIAAGLVPIIEPEVDIKTPNKDKAEDLLKAALLKQLNALKADQKVMLKLTI
                     PDKDNLYTDLIKHKNVLRVVALSGGYTRDEANKRLARNNGMTASFSRALAEGLKAQQS
                     DKEFNAALDASIESIYRASIT"
     gene            2690..>3937
                     /locus_tag="VIQ99_08825"
     CDS             2690..>3937
                     /locus_tag="VIQ99_08825"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012701390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEY9183289.1"
                     /translation="MSNAKIIYTLTDEAPALATYSLLPIVQAFTNAAGCTVETRDISL
                     AGRILACFPDRLPSERRVADDLAELGEIAKTPDANIVKLPNISASVPQLSSAIKELQQ
                     QGYDVPNFPEEPKTDAEKAIRAKYAKVLGSAVNPVLREGNSDRRVASSVKQYAKKHPH
                     SMGAWSKDSRTHVASMGGGDFYSSEQSVTVSKAGAVKIELTGNRGEKTVLKESVNVKE
                     GDLLATSSMSRRALRDFFAKQIADAKTKGLLLSLHLKATMMKVSDPIMFGHAVEVFFE
                     DVFRKHAEALQKLGVEPNNGIGDLYAKIKTLPESARAAIEGDLKAVYETRPELAMVDS
                     SKGITNLHVPSDVIIDASMPAAIRASGQMWGPDGKLRDTKALIPDRCYAGIYQEVIDD
                     CRKNGAYDVPTMGNVSNVGLMAQS"
BASE COUNT          830 a         1268 c         1250 g          589 t
ORIGIN      
        1 gagcgccggc agcgcatcgg caggaatcgt ggctttgcgg accgtaccgc gaaactcgcc
       61 gccgatctcc cgccacaacg actcgaacat cccggcggcg aaggtgtcgt gctgcagaac
      121 ggtccgaccg aaaccgtaga cgttgcagcg gcgcgagaac tcgccgtcga gcacgacacg
      181 cgccagagat ttcgggtcgg catgattgaa cgcgatgccg gcctggtatc cgacgcaagg
      241 accgtcgccg agcttcaggt tgttgtcgat cacgaggttc gtcagcacgg ggtcggtcgc
      301 gacctgcacg cggtcgtgcg cgggatcggc cctgaactga aactgcacgg ccttgaagtt
      361 catcagcagc gcattcggca cgacgttgta ggtccgatag ggctggccgt cgaacgcgcc
      421 gggctcgggc tcgtcgatca ggaaatggct gtcgtcgaga acgagatcgc cggtgatctc
      481 cttgaggccg agcctgcgca gcgatcgcag gagcttccag acctcctcga cgaccaggta
      541 agggtcgccg taacccttca acgcgaggtc gccgtcgagc ttctcgccgt cgaggccacc
      601 caagaaatag acctcggtcg gccaggtgta cgcgggcccc aggtactcga gcgcgctcca
      661 cgtcgtgacc accttcatga ccgacgcggg gctgcggctc acgtcgggca gatggctaag
      721 cagcggctcc ggcgcatcga cggcctgaac gatgatgctg acgtcgtcgg cagggatgcc
      781 gtgcccggtc agcacgcgct ggataccggg cggcagctcg gccgcgcgcg ccacgcacgc
      841 aaaccccaac gccccgagca cgacgatgcc gactcgcatg gccgtggatt ctgcccgacg
      901 tgcgggcggc agcactagcg gtccgggcgt gggcggcgtg cggtcacaga ttcttggcga
      961 cgatccggcg cgcctccgcc tcttcatacg cgcgcttgat cgtcttgagg ccccatccga
     1021 acgccggaat ggtcacgaca cccgacagca gcaacgggaa aacgacgtgc caaggctggc
     1081 ccatcagcgc ggccacggca ccgagcccga gcagggccac tccgagcgcc aggcacgcgt
     1141 agtagacgcc cgtgacggcc gagcgatgct tgccgcgctt cgcgaacgcc tcgagcgccg
     1201 ccgcgatcga cagcaacgac aggaacgaga accacatacc cacgtcgggc ccgaaccagg
     1261 cattcatgat ttcgctcctt tggcttccct gtgcagacgc aatagctctt tcgcgagctt
     1321 cggcgccatc tctccgtccg cgacgaggac gcggacccgc gcctcgagaa cgtcgtcggc
     1381 cgcattgcgg tcgagcaacc ggagccgctc gatcagggca tcgacgcgcg cacgaatcgt
     1441 cggatacgac acgccgtaat cggcggcgag ctccttcaac gacccggaca gcagcacgaa
     1501 gcgcctgatc agctggagat cgtcctcgtc gagactgacg acccaggtgg gcaactcggc
     1561 cggtaccatg gtcgggatcc taggcctaaa taaaatgaaa gtccattttc tgtttattta
     1621 gagcggcccg attcgctcac gggctagaat agcgagcgtt tcccacagca aggcctttgg
     1681 ttcgaggagt cccccgtgag cacgttcgat gaccaactga ccaagatcaa gaacgacaaa
     1741 ggcttcatcg ccgccttgga ccaaagcggc ggtagcacac cgaaggcctt gaagctctat
     1801 ggaatcgacg agacggcttg gaaggacgag aaaggcatgt acgacgtcgt gcacgccatg
     1861 cgcacccgaa tcatcacgag ccccgcgttc tcgggcaagc gcttgatcgg cgcgatcctg
     1921 ttcgagaaca cgatggaccg cgacatcgaa ggcaagccga caccgaccta cctctgggac
     1981 gtcaaaggcg tcgtgccctt cctgaaggtc gacaaaggcc tcgccgacga gaaggacggc
     2041 gtgcagctca tgaaaccgat gccggatctc ggctcgttat tgaagcgcgc gaaagccaag
     2101 aacgtattcg gcacgaagat gcgctcggtc atcaagcagg cgaatccggc cggcatcgac
     2161 gccgtcgtca agcagcagtt cgacatcggc aaggagatca tcgccgccgg cctcgtgccg
     2221 atcatcgagc ccgaggtcga catcaagacg ccgaacaagg acaaggccga ggacctgctc
     2281 aaagccgcgc tcttgaagca gctgaatgct ctgaaggccg accagaaggt gatgctgaag
     2341 ctcacgatcc ccgacaagga caacctctac acggacttga tcaagcacaa gaacgtgctg
     2401 cgcgtcgtcg ccctctcggg cggctacacg cgagacgagg cgaacaagcg cctggcgcgc
     2461 aacaacggca tgacggccag cttctcgcgg gccctcgccg agggtttgaa ggcgcagcag
     2521 tccgacaaag agttcaatgc cgcgctggac gcatcgatcg agagcatcta ccgcgcatcg
     2581 atcacctgac cggacgactc gcacgagccg tttgcgctag gccagcgctt caaggccaca
     2641 ggcgaggctt cggccacgag gcccgcggcg aacttcggac gaagggacca tgagtaacgc
     2701 caagatcatt tacacgctga ccgacgaagc gcccgcgctc gcgacctact cgctgttgcc
     2761 gatcgtgcag gcgttcacga acgcggccgg ctgcacggtc gagactcgcg acatctcgct
     2821 cgcgggccgg atcctggcgt gcttccccga caggcttccg agcgagcggc gcgtcgccga
     2881 cgacctggcc gagctcggcg aaatcgcgaa gacgccggac gcgaacatcg tcaagctgcc
     2941 gaacatcagc gcgtccgtgc cacagctctc gagcgcgatc aaggagcttc agcaacaggg
     3001 ctacgacgtt ccaaactttc cggaagagcc gaagacggat gcggagaagg cgatccgagc
     3061 caagtacgcg aaagtgctcg gcagcgccgt gaacccggtg ctgcgcgagg gcaactccga
     3121 ccgccgcgtc gcgagctcgg tgaagcagta cgcgaagaag catccgcact ctatgggcgc
     3181 gtggagcaag gactcgagga ctcacgtcgc cagcatgggc ggcggggact tctactccag
     3241 cgagcaatcg gtgaccgtat cgaaggccgg cgcggtgaag atagagctca cgggcaaccg
     3301 cggcgagaaa accgtgctca aggagtcggt caacgtcaag gaaggcgact tgctcgcgac
     3361 ctcctcgatg agccgtcgcg cgctacgcga ctttttcgcg aagcagatcg cggacgcgaa
     3421 gaccaaggga ctgctcctgt cgctgcactt gaaggccacg atgatgaagg tctcggaccc
     3481 catcatgttt ggccatgcgg tcgaggtgtt cttcgaggat gtcttccgca aacacgccga
     3541 agcgctgcaa aaactcggtg tcgagccgaa caacggcatc ggcgatctgt acgcgaagat
     3601 caagacgctg ccggagtccg cgcgtgccgc gatcgagggg gacctcaagg cggtgtacga
     3661 gactcggccc gagctcgcga tggtcgactc gagcaagggc atcacgaacc tgcacgtgcc
     3721 gagcgacgtg atcatcgacg cctcgatgcc agcggcgatc cgcgcatcgg gccagatgtg
     3781 ggggcccgac ggcaagctcc gcgacacgaa ggcgctgatc ccggaccgct gctacgccgg
     3841 catctatcaa gaggtcatcg acgactgccg caagaacggc gcgtacgacg tgccgacgat
     3901 gggcaacgtg tcgaacgtgg gcctcatggc gcaatcg
//
LOCUS       DATCUD010000606         1914 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_6357, whole genome shotgun sequence.
ACCESSION   DATCUD010000606 DATCUD010000000
VERSION     DATCUD010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6357"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..139)
                     /locus_tag="VIQ99_08830"
     CDS             complement(<1..139)
                     /locus_tag="VIQ99_08830"
                     /inference="COORDINATES: protein motif:HMM:NF024820.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183290.1"
                     /translation="MSKRRLDIVAALTLAHEHHQAGRLQQAEQLYRSILETDPDNADA
                     NH"
     gene            complement(162..1106)
                     /locus_tag="VIQ99_08835"
     CDS             complement(162..1106)
                     /locus_tag="VIQ99_08835"
                     /inference="COORDINATES: protein motif:HMM:NF019533.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1684 domain-containing protein"
                     /protein_id="HEY9183291.1"
                     /translation="MKLRPALLVLDPPRPVPAAWVSALAAATIGCQPAAPPPLEWNDA
                     VVTEIETWRAEHEKSYRNNWVTIEGLHFLKPGAQTAGSAPDNDVVLIASLPERLGTFT
                     AASDEVTFEPEPGAPITINGEAAASARVLRDDGTEEADVIEANDASVVVHRSGTRLSL
                     RVRDPNGERALLFEGFEWFPISRDYRVLGRFIRDATPRNLPVVNTFGDVDTYETEGVV
                     EFTLNGETLRLRPFTTDSGRFYFVFNDASSGIETYEAARFLYSDLRQDGTTILDFNVA
                     YNPPCAFNPFTTCPIPLPENRLPIKVLAGEMKYRGDEP"
     gene            1263..1685
                     /locus_tag="VIQ99_08840"
     CDS             1263..1685
                     /locus_tag="VIQ99_08840"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183292.1"
                     /translation="MAKSTTALKCAAYFVVLTLGAAHSANAHHSFAMFDNENQIKLEG
                     TVTHFQWTNPHVYIELDATNVYSDDKTVKGWTIECANPGILNRIGWKFNMVKPGDEIT
                     IIVAPLRSGEPGALLKQITLPDGRVFANGGPAGPALIQ"
     gene            1698..>1914
                     /locus_tag="VIQ99_08845"
     CDS             1698..>1914
                     /locus_tag="VIQ99_08845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183293.1"
                     /translation="MEPRKPTVCACAAAVLVLCAMQPTGAQPLDRSRSSETVVGVPDF
                     SGTWERFTPPRDPNAAPARGTPGAGLGP"
BASE COUNT          324 a          590 c          651 g          349 t
ORIGIN      
        1 agtgattcgc gtcggcgtta tcggggtcgg tctcgaggat cgaccggtag agctgctccg
       61 cttgctgcag cctgccagcc tggtgatgtt cgtgggcgag cgtcagggcc gcgacgatgt
      121 cgagtcgacg cttggacatg gccgcgggtt gacggtaggt ttcaaggctc gtccccgcga
      181 tacttcatct cgcccgcgag caccttgata ggcagccggt tctcgggcag cgggatcggg
      241 caggtcgtga acggattgaa cgcgcagggc gggttgtacg ccacgttgaa gtcgagaatc
      301 gtcgtgccgt cctgccgtaa gtccgagtac aggaagcgag cggcctcgta cgtttcgatg
      361 ccgctcgatg cgtcgttgaa cacgaaatag aaacgtccgg agtccgtcgt gaacggccgc
      421 aggcgcaggg tttcgccgtt cagcgtgaac tcgacgacgc cttcggtctc gtaggtgtcc
      481 acgtcgccga aggtgttgac gacgggcaga ttgcgcggtg tcgcgtccct gatgaagcgg
      541 ccgaggactc ggtaatcacg gctgatcgga aaccactcga atccctcgaa cagcagcgcg
      601 cgctcgccgt tcgggtcccg gactcgtaac gacaggcgcg tgccgctgcg gtgaaccacg
      661 acgctcgcgt cgttggcctc gatgacgtcg gcctcttccg tgccgtcatc gcgaagcacc
      721 ctcgccgacg ctgccgcttc gccgttgatc gtgatcgggg ctccgggctc gggctcgaac
      781 gtgacctcgt cggatgcggc cgtgaaggtg ccgagacgct ccggcaacga ggcgatcagg
      841 accacgtcgt tgtcgggcgc gctgccagcg gtttgagcgc cgggtttcag gaagtgcagg
      901 ccttcgatcg tgacccagtt gttcctgtag ctcttttcgt gctccgcgcg ccacgtttcg
      961 atctccgtga cgaccgcgtc gttccactcg agcggcggcg gggcagcggg ctggcagccg
     1021 attgtggctg cggcgagtgc gctgacccac gccgccggca cggggcgcgg aggatcaaga
     1081 accagcaggg cgggtcgcag tttcatggcc gaagcatggc attagtcgcc gccgaagtct
     1141 cgactcggtg cagtcgttcg cgcgcggttc ttgtgtatcg aggattcccg gtttagcttt
     1201 cggtgcggaa cagaacggaa tacgcgccgc aactccggcg tttttcgaag ggagggatgt
     1261 cagtggccaa gtcgacaact gcgctcaagt gcgctgctta cttcgtcgtc ctgacactgg
     1321 gtgccgcaca ttccgcgaat gcccatcatt cgttcgcgat gttcgacaac gaaaaccaga
     1381 tcaagctcga gggaacggtc acgcatttcc agtggaccaa cccgcacgtc tacatcgagc
     1441 tcgacgcgac gaacgtctac tccgatgaca agacggtgaa gggttggacg atcgagtgcg
     1501 cgaatccggg gatactcaat cgcatcgggt ggaagttcaa catggtgaag cccggggacg
     1561 agatcacgat catcgtcgcc cccttacgca gcggcgagcc cggcgcgctg ctgaagcaga
     1621 tcacgttgcc cgacggccgc gtgttcgcga acggcgggcc ggctggaccg gcgctgattc
     1681 aatagcgggg ccgcacgatg gaaccaagga aaccgaccgt gtgcgcgtgc gctgcggcag
     1741 tgctcgtgct gtgcgccatg cagcccacgg gcgcacagcc actcgatcgc agccgttcga
     1801 gcgagaccgt cgtcggcgtg ccggacttca gcggcacgtg ggaacgcttc acgccgccgc
     1861 gcgacccgaa tgcggcgccc gcgcgcggta cgcccggcgc gggcctcggg ccca
//
LOCUS       DATCUD010000607         2574 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48613, whole genome shotgun sequence.
ACCESSION   DATCUD010000607 DATCUD010000000
VERSION     DATCUD010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48613"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..963
                     /locus_tag="VIQ99_08850"
     CDS             <1..963
                     /locus_tag="VIQ99_08850"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018446487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY9183294.1"
                     /translation="DYLVLATGSTHSYFGRDDWQPFAPGLKSIDDATTIRRRILCAFE
                     TAEMTGDADQRRRLLTFVVVGAGPTGVELAGTIAELARFTLAADFRRIDPRSARIVLV
                     EAGPRVLPAFAAPQSAYAQHALEKLGVDVRLNARVTGCGATGVELGSERLDSETVIWA
                     AGVAASPAGRWLGVPTDRAGRVIVRADLSIPDDAGVFVIGDAAAVALRDGTLVPGVAP
                     AAKQQGRYVARVLATRIAHRPAPPPFAYRNPGALATIGRKCAVIEFPLLTLRGWLAWW
                     IWGVAHIYFLVGVPSPIMVSLRWLWEYVTYGRGARLITGSEHAD"
     gene            complement(960..2003)
                     /locus_tag="VIQ99_08855"
     CDS             complement(960..2003)
                     /locus_tag="VIQ99_08855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183295.1"
                     /translation="MATVRFSALGNPTVIVTAIVYGLLLRIAEAAGLFGMLLRILVTL
                     SLWRYGYSVLRNVANGWNHFPPPDIESTNPFGQFAVVLHSFLFSSLIYLLATTPLVDG
                     FLRWALLLFVLGVFPASAAIMAMTRNAAAAFSPVAIATLMKELRADYLKLYAVSVALG
                     LLTTYAGSAGWGFGIVADMVSVWTSLALFLATGVTLRAHRFELDLLEGLDDAEERNER
                     YRQVEWQRSLDRAYASVRSGLPAQAYRTIKELIASEGDSLDIYQWTFNGMLAWDEQHH
                     AALLGERFARRLWDEGRKVDALDLAQRCRKLSPQFAPPAAFTAELAEYARSIGRHRLA
                     DELGAAAAAPPPR"
     gene            complement(2003..>2574)
                     /locus_tag="VIQ99_08860"
     CDS             complement(2003..>2574)
                     /locus_tag="VIQ99_08860"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY9183296.1"
                     /translation="HRRWIEKARRDLASSRPIRSEGLPERIELEAIGEGWRVEYVHEP
                     QAVPRYRVVGDTLEVCTREANRRGADRLLRDWLLDRADYHLTPWLLRESVIVGHRPAN
                     VQVRLQRTRWGSCSDSGTVSLNAALLFLPPEIVRYLFVHELCHFISMNHSRRFWSAVA
                     RFEPDYEALDRRLTAAWNDIPLWAHPAVR"
BASE COUNT          427 a          883 c          865 g          399 t
ORIGIN      
        1 gattacctgg tcctcgcgac gggctcgaca cactcgtact tcggccgcga cgactggcag
       61 ccgttcgctc caggactgaa atcgatcgac gacgcgacca cgatccgccg ccgaatcctg
      121 tgcgcgttcg agactgcgga gatgaccggc gacgcggacc aacggcgacg cctgctcacg
      181 ttcgtggtcg tcggcgcagg acccaccggc gtcgagctcg ccggtacgat cgcggagctc
      241 gcgcggttca cgttggcggc tgatttccgc cgcatcgatc cgcgcagcgc gcgcatcgtg
      301 ctcgtcgaag ccggtccgcg tgtgctgccc gcattcgcgg cgccgcaatc ggcgtacgca
      361 cagcacgcgc tcgagaagct cggcgtcgac gtaaggttga acgcacgcgt cacgggctgc
      421 ggtgcgaccg gtgtggagct cggctccgag cggctcgaca gcgagacggt gatctgggcc
      481 gcaggtgtcg cggcttcgcc cgccgggcga tggctgggcg tgccgacgga ccgggccggc
      541 cgcgtgatcg tgcgtgccga tctttcgatt cccgacgatg ccggcgtgtt cgtgatcggc
      601 gatgcggctg cggtcgcgtt acgggatggc acgctcgtgc ccggcgtcgc gccggccgcg
      661 aaacaacagg gccgctacgt tgcacgcgtc ctcgcgaccc gcatcgcgca tcgcccggca
      721 ccgccgccgt tcgcgtaccg gaatcccggg gcgctcgcga cgatcggccg caagtgcgcc
      781 gtgatcgagt ttccgctcct gacgttgcgc ggctggctcg cgtggtggat ctggggcgtc
      841 gcgcacatct attttctggt cggcgtgccg agcccgatca tggtctcgct gcgctggctc
      901 tgggagtacg tgacctacgg ccgcggcgcg cgcctgatca cgggcagcga gcacgccgac
      961 taacggggcg gtggcgcggc ggccgcggcg ccgagctcgt cggcgagtcg atgccggccg
     1021 atggagcgcg cgtactcggc gagctcggcc gtgaaggcgg ccggcggtgc gaattgcggc
     1081 gatagcttcc ggcagcgctg cgcgaggtcc agcgcgtcga ctttgcgccc ctcgtcccac
     1141 aagcgccgcg cgaagcgctc gcccaacagc gccgcatggt gctgctcgtc ccaggcgagc
     1201 atgccgttga acgtccactg atagatatcg aggctgtcgc cctcgctcgc gatcagctcc
     1261 ttgatcgtgc gatacgcttg cgcgggcagc ccgctccgga ccgacgcgta ggcgcgatcg
     1321 agcgacctct gccattccac ctgccggtag cgttcgttgc gttcctcggc gtcatcgaga
     1381 ccctcgagca gatcgagctc gaaccggtgc gcgcgcagcg tcacaccagt cgcgaggaac
     1441 aacgcgagac tggtccagac ggacaccatg tccgcgacaa tcccgaaccc ccaccccgcg
     1501 ctgcccgcat aggtcgtgag caggccgagt gccacgctca ctgcatagag cttcaggtag
     1561 tcggcgcgga gctccttcat cagggtcgca atcgcaaccg ggctgaacgc agccgcggcg
     1621 tttctggtca tcgccatgat cgccgcggac gccggaaaca cgccgagaac gaacagcagc
     1681 aacgcccacc gcaagaaccc gtcgaccaat ggcgtcgtcg cgagcaggta gatcagcgac
     1741 gaaaacaaga acgaatgcag gacgaccgcg aactgcccga acgggttcgt ggactcgata
     1801 tcgggcggcg ggaaatggtt ccagccgttc gcgacgttgc ggagcacgga atagccgtag
     1861 cgccagagcg aaagggtcac gagtatccgg agcaacatcc cgaagagtcc ggcggcctcg
     1921 gcgatgcgca acaggagccc gtagacgatc gccgtgacga tcaccgtcgg gttcccgagc
     1981 gcgctgaatc tgaccgtggc cattaccgta ccgccggatg ggcccacagc gggatgtcgt
     2041 tccaggccgc cgtgagcctc cggtcgagcg cctcgtagtc gggctcgaat cgcgcgaccg
     2101 ccgaccagaa tcgcctcgag tggttcatgg agatgaaatg acacagctcg tgcacgaaca
     2161 gataccgcac gatttcgggc ggcaggaaca gcagggcggc gttcaggctc accgtgccgc
     2221 tgtcggagca gctgccccag cgcgtccgct gcaatcggac ctgcacgttc gcgggtcgat
     2281 ggccgacgat cacggactcg cgcagcaacc acggcgtcaa atgatagtcg gcccggtcca
     2341 ggagccagtc acgcagcaac ctgtcggcac cgcgccgatt ggcttcgcgc gtgcacacct
     2401 cgagcgtgtc gcccacgacg cgataccgcg gcacggcttg cggctcgtgc acgtactcga
     2461 cgcgccagcc ttcaccgatt gcttcgagct cgatccgctc gggcaacccc tcggaccgga
     2521 taggtcggga gctcgccaaa tcgcgccgcg ccttttcgat ccaacgccgg tgcg
//
LOCUS       DATCUD010000608         3415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77225, whole genome shotgun sequence.
ACCESSION   DATCUD010000608 DATCUD010000000
VERSION     DATCUD010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77225"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1256)
                     /gene="ppx"
                     /locus_tag="VIQ99_08865"
     CDS             complement(<1..1256)
                     /gene="ppx"
                     /locus_tag="VIQ99_08865"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR03706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEY9183297.1"
                     /translation="MLPDPKPSAGGDAAEIMAAVDLGSNSFHMVVARNQHGEPSIIDR
                     LREMVRLASGLNQEGSLDEDSQQRALACLRRFGQRLRDMRAHQVRVVGTNTLRRAQNA
                     DTFLVKAEEALGHPVEVISGIEEARLIYLGVSHHTDSTDGRNLVVDIGGGSTELIIGE
                     GYEPEYLESLYVGCVGMSRVHFDDGKLSAKRFERARLAARLELRPVAAAFRRRGWKRA
                     IGSSGTVRAARDVAREMRLTESGMTLAAVEAVIGEMINAKRVDDLRLPGLGAERAPVF
                     AGGMAILAEIMSMLRIERMEVSNGALREGLLYDMLGRLHDEDARERSIRAMQRRYHID
                     LDQALRVETTAAALFDRAAGGWKLSERDRQLIVWAARLHEIGLDIAHARYHHHGGYLV
                     ANSDLPGFVRLEQQRLASLVTLHRRK"
     gene            complement(1278..1634)
                     /gene="erpA"
                     /locus_tag="VIQ99_08870"
     CDS             complement(1278..1634)
                     /gene="erpA"
                     /locus_tag="VIQ99_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015600516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEY9183298.1"
                     /translation="MTETAETREAPPLNFTSAAAQKVGQLIEQEGNVALKLRVYVQGG
                     GCSGFQYGFTFDEEIQEGDTAIENEGVTLLVDPMSVQYLMGAEIDYREDLSGAQFIIR
                     NPNATTTCGCGSSFSV"
     gene            complement(1637..2062)
                     /locus_tag="VIQ99_08875"
     CDS             complement(1637..2062)
                     /locus_tag="VIQ99_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009207721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY9183299.1"
                     /translation="MLGKKSRGQAPINTLVGVDTRVNGDIEFSGGFHVDGYVKGNVKS
                     TKDNTSVLSISERGCVEGSVVVPHVVLNGIVKGDVRATQRVELGPKARVIGNVQYKLI
                     EMSIGAEVNGKLIHESDAAAPKSASRPIVDTVRPINAGE"
     gene            complement(2081..2779)
                     /locus_tag="VIQ99_08880"
     CDS             complement(2081..2779)
                     /locus_tag="VIQ99_08880"
                     /inference="COORDINATES: protein motif:HMM:NF042896.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6776 family protein"
                     /protein_id="HEY9183300.1"
                     /translation="MIDLRGRSLVLAALAAAVAIGSLYLAFELGRYRSGYSIMDTRRE
                     RDDLEQRLKEEQAASDELRRQLAIAETAGEIDRETYSEIKSSLSDLEAKIQAQEEELV
                     FYRGIVSPQDGVPGLRIQSLEVLPGDGEGRYLLRLLLVQAIVHSRRVSGAVKLRLEGI
                     QDGQTTSFDIAELAEPGESYDMAYEFRYFQGLETELSLPAGFEPQRVLVEIWPNEARA
                     ERINQTFEWPQVAG"
     gene            complement(2776..3333)
                     /locus_tag="VIQ99_08885"
     CDS             complement(2776..3333)
                     /locus_tag="VIQ99_08885"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEY9183301.1"
                     /translation="MDFIDEQGFRANVGIIVTDGGGRVLIAGRRGRGGWQFPQGGIQP
                     EESTEAAMFRELHEEVGLDPGDVELVGSTEGWLRYRLPDRYIRREQTPLCIGQKQRWF
                     LLQLRTNADRVRFDLTPEPEFDRWRWVDYWRPVKEVVYFKRPVYVRALHELGPLAFPK
                     DGPPPPPAWWPRRWQRALQERAELT"
BASE COUNT          613 a         1169 c          984 g          649 t
ORIGIN      
        1 aacttccgcc ggtgcagcgt cacgagactc gcgagccgct gttgctccaa acgcacgaac
       61 cccggcaaat ccgagtttgc gacgaggtag ccgccgtgat ggtgatagcg ggcgtgcgcg
      121 atatcgagac ctatctcgtg caaccgagcc gcccacacga tcagctgccg gtcccgctcc
      181 gatagcttcc agccgccggc ggcccgatcg aacaacgccg ccgcggtcgt ctcgacgcgc
      241 aacgcttgat cgagatcgat gtgatagcgg cgctgcatcg ctcgaatcga tcgctcgcgc
      301 gcgtcctcgt catgtaggcg cccgagcatg tcgtacaaca atccttcgcg cagcgctccg
      361 ttgctgactt ccatccgctc gatgcgcagc atgctcatga tctcggccaa tatcgccatg
      421 ccgcccgcga aaaccggagc gcgttccgcg ccgaggcccg ggaggcgaag gtcgtcgaca
      481 cgtttcgcgt tgatcatctc gccgatgacg gcttcgaccg ccgcaagcgt catgccgctc
      541 tccgtcaaac gcatttcgcg cgccacgtcc ctcgccgcgc gaacggtgcc ggacgatccg
      601 atcgcacgct tccaaccgcg gcgacgaaac gcggccgcga ccgggcgcag ctccagccgt
      661 gctgcgagtc gcgcacgctc gaaccgcttc gcgcttagct tgccgtcatc gaaatgtacg
      721 cggctcatgc cgacacaacc gacgtacagg ctctcgaggt actccggctc gtatccctcc
      781 ccgatgatca actccgtgct gccgccgccg atgtcgacga cgaggtttct gccgtcggtg
      841 gagtcggtgt ggtgagaaac gccgagatag atgagccgcg cttcctcgat gcccgagatg
      901 acctcgaccg gatgaccgag cgcctcctcg gcttttacga ggaaagtgtc cgcgttttgc
      961 gcgcgccgaa gcgtattggt gccaaccacc cgcacctggt gagcccgcat gtcccgcaag
     1021 cgttggccga agcgccgtag acaggccagc gcacgctgct ggctgtcttc gtcgagggag
     1081 ccctcctggt tcaggccgga ggccaaacgc accatctctc gaagccgatc gatgatcgac
     1141 ggttcgccgt gctgattgcg cgcgacgacc atatggaagc tgttcgagcc caagtccacc
     1201 gcggccatga tttccgcggc atcgccaccg gccgacggtt taggatcggg caacaccaga
     1261 gcccgcgccg gtatgcgtca gaccgagaac gacgatccgc aaccgcatgt ggtcgtggcg
     1321 ttcggattgc gaatgatgaa ttgcgccccc gagaggtcct cgcggtagtc gatctcggcc
     1381 cccatgaggt attggacgct catcgggtcg acgagcagcg tgacgccctc gttctcgatc
     1441 gccgtatcgc cttcctgaat ttcttcatcg aaggtaaagc cgtactgaaa gccggagcac
     1501 ccgccgccct gcacgtagac gcggagcttc agcgccacat tcccttcctg ctcgatcagc
     1561 tgcccgactt tttgagcggc ggccgaggtg aagttcaacg gcggcgcctc gcgagtttct
     1621 gcagtttccg tcatgactac tctcccgcgt tgatgggtcg caccgtgtcg actatcgggc
     1681 ggctcgcgct cttcggagcg gcggcgtcgc tctcgtgaat cagcttgccg ttgacctccg
     1741 caccgatcga catctcgatg agcttgtact gaacgttgcc gatcacgcgt gctttcggcc
     1801 cgagctcgac tcgttgcgtg gcgcgcacgt cgcccttcac gatgccgttc aacaccacat
     1861 gaggcacgac gaccgaaccc tcgacacagc cgcgctcgct gatgctgagc accgacgtat
     1921 tgtccttcgt cgatttgacg ttgcccttga catagccgtc cacgtgaaag ccgcccgaaa
     1981 actcgatgtc gccattgacg cgggtatcga ccccgaccaa tgtgttgatc ggtgcttgac
     2041 cgcgcgattt cttccctagc atgcgaactc cgtcatcgtg tcaacccgcc acttgcggcc
     2101 actcgaacgt ctgattgatt cgttccgccc gagcctcgtt cggccagatc tcgaccagca
     2161 cgcgctgagg ctcgaagccg gctggcaacg agagctccgt ttccagccct tggaagtagc
     2221 gaaactcgta agccatatca tacgactcac cgggctccgc aagctcggca atatcgaacg
     2281 acgtcgtttg accgtcctga attccttcca gtcgcagctt cacggcgcct gagacgcgcc
     2341 gactgtggac gattgcctgc accagcaaca atcgcagcag gtaacgtcct tcaccgtcgc
     2401 ccggcaacac ctcgaggctc tggatgcgca gccccggcac gccgtcctgc ggcgatacga
     2461 tgccgcgata gaagacaagc tcttcctctt gcgcttgaat tttcgcctcg agatcgctca
     2521 ggctcgactt gatctctgaa tacgtctcac gatcgatctc gcccgccgtc tccgcgatcg
     2581 caagctgccg tcgcaactcg tcgctcgccg cttgttcttc cttgagccgc tgctctagat
     2641 cgtcgcgctc acgacgcgtg tccattatcg agtatccgct ccgataacgg ccgagctcga
     2701 acgccagata caacgacccg atcgccaccg ctgcggcgag cgcggctaga accagggacc
     2761 tgccgcggag gtcgatcatg tcagctcggc ccgttcttgc agagctcgtt gccaacggcg
     2821 cggccaccag gcgggcggcg gcggaggtcc gtccttcgga aacgcgagag gaccgagctc
     2881 gtgtaatgct cggacataca caggccgttt gaaatacacg acttccttga cgggccgcca
     2941 atagtcgacc caacgccacc gatcgaactc cggctcgggc gtgagatcga agcgcactcg
     3001 gtcggcgttc gtgcgaagct gcagcaggaa ccaacgctgc ttctgaccga tgcagagcgg
     3061 cgtctgctcg cggcgaatgt agcggtccgg caagcgatag cgcagccatc cttccgtcga
     3121 ccccacgagc tcgacgtcac ccggatcgag accgacctcc tcgtgcagct cgcggaacat
     3181 ggcggcttcg gtgctttcct cgggttggat acccccctgc gggaactgcc accccccgcg
     3241 tccacgccgg cctgcgatca gaacacggcc gcccccatcg gtcacgatga tgccgacgtt
     3301 tgcgcgaaaa ccctgttcgt cgatgaagtc catgacccgg tcgattcttt catatccgcc
     3361 gtagtggttc caaaacggac agccgaggat gtgaccggct tggctgttgg ccggg
//
LOCUS       DATCUD010000609         3115 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105224, whole genome shotgun sequence.
ACCESSION   DATCUD010000609 DATCUD010000000
VERSION     DATCUD010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3115
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105224"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..916)
                     /locus_tag="VIQ99_08890"
     CDS             complement(<1..916)
                     /locus_tag="VIQ99_08890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183302.1"
                     /translation="MRPLTRIEPGEGRCLLLFFAYAFLVLVSYYIVRTLREPLLLVDA
                     SAEVKTYASAMAALALLLLVPLYAAAFRRTSRNQLVHWVTGFFIATLGALFLARRAGV
                     DIGFAYYVWAGIFGVTIVAQFWAHAADCFDATTGRRLFPAIMMGATLGGIVGPSVYRV
                     LDHSLDASQLMLVSIALLALTTPLVSWTRSSVPTAARSRGSEPSDPATDSAFGGFALI
                     ARDRYLLLVALLIMLLNCVSTLGDFLLTDVVVRHAEEQVASDPSLDKGRLIGDFYASF
                     YLSVNVLTVLLQVFVVGRLFRWVGVNGAL"
     gene            complement(1005..1157)
                     /locus_tag="VIQ99_08895"
     CDS             complement(1005..1157)
                     /locus_tag="VIQ99_08895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183303.1"
                     /translation="MDANLKNNDRRGRRLLNGVMSDWVWEVCLILIATPIVIDAFLSI
                     GANYTA"
     gene            1310..1918
                     /locus_tag="VIQ99_08900"
     CDS             1310..1918
                     /locus_tag="VIQ99_08900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY9183304.1"
                     /translation="MVETPDHALEAQISTDFVTRIGLGDRRAEEELVRRYQRGLIYLL
                     RRRTRDPQLALDLAQETFRIAIEKLRQAPIEQVDRVGAYLRGTALNLASADVRKHTRR
                     GTTADSDAIDAAADDAAGPFDHVSGEQVQRLVRRLLDELPVPRDREILIKTYLEDQDK
                     SAICEALGVDSAHYNRVLFRAKQRFRDLLTTAASQRGLKVVE"
     gene            1955..2644
                     /locus_tag="VIQ99_08905"
     CDS             1955..2644
                     /locus_tag="VIQ99_08905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183305.1"
                     /translation="MDRQYIQDNEVIERYLSGALTAAEEQAFEEAYLGDPELLDQVQA
                     AERLREGIKELDGAGRLERLRAPARWRHWLASPQYAAAASVLLAVTLGFSAVLYRENL
                     ALRQDDLLRGSATMRLVGLDGVRGGNGPELSAPAPDELTVLQLDAGIVAYDTYRGVLT
                     RGAGAQSETIWNRADLMARSDGTILIGPVPARALLPGSYVARLDGRMNAWPAERFDEI
                     GRTDFTVVPRD"
BASE COUNT          585 a          967 c         1032 g          531 t
ORIGIN      
        1 gcaatgcgcc gttgacgccg acccagcgaa acaatcggcc gacgacgaac acctgcaaga
       61 ggaccgtcaa cacgttgacc gagagataga agctcgcgta gaagtcgccg atgagccgac
      121 ctttgtcgag tgaaggatcg ctcgccacct gctcttcggc atggcgtacg acgacgtccg
      181 ttaaaaggaa atcgccgagg gtgctcacgc agttcaacag catgatcagc agcgcgacga
      241 gcagcaggta tcgatcgcgc gcgatcaacg cgaacccacc gaacgcgctg tcggtcgccg
      301 gatcgctggg ctcactgccg cggctccgcg cggccgtcgg gacgctgctt cgcgtccaac
      361 tcacgagcgg cgtcgtgagc gccagcaggg cgatggacac gagcatcagc tgtgacgcat
      421 ccaatgagtg gtcgagcact cgatacacgg aagggccgac gatgccgccg agggtcgcac
      481 ccatcatgat tgcgggaaac aaccgccggc ccgttgtggc gtcgaagcag tcggccgcgt
      541 gggcccagaa ctgtgcgacg atcgtcacgc cgaaaattcc ggcccagacg tagtaggcga
      601 agccgatatc gacgcccgca cgtctcgcaa ggaatagcgc accgagcgtc gcgatgaaga
      661 atcccgtgac ccagtgaacg agttgattcc ggctcgtgcg gcggaaggct gctgcataga
      721 gcggcacgag caacagcagc gccagcgcgg ccatggccga ggcgtacgtc ttgacctcgg
      781 ccgacgcgtc gacgagcagc agcggctcgc gaagcgtgcg cacgatgtag tacgagacga
      841 ggaccaagaa cgcatacgcg aagaagagca gcaagcagcg gccctcgccc ggctcgattc
      901 gggtgagggg ccgcaagatt cccgcggata ggggccggcc ccacggccgg cccccgatgg
      961 cggcgatcaa cgtcggctga cgtggcgcag tcattgcttg cacctcaggc cgtgtagttg
     1021 gcgccgatcg acaggaaggc gtcgatgacg atgggtgttg cgatcaagat caagcacacc
     1081 tcccacaccc aatccgacat cacaccgttg agcagtcgtc ggccgcgtcg gtcgttgttc
     1141 ttcaggttcg cgtccatatt cgtctccttt caagcgtcgt gtgtttcttc agcggatgac
     1201 cgagtgttct cgctcgtccg tcgtggaata tgtgcaatga cccacgctag aatctcactc
     1261 gccgcgcaaa gtcgtattgt tttcctgaag cgccggagtt cgcagcatcg tggtagagac
     1321 gcccgaccac gcgctcgaag cgcagatctc caccgacttc gtgacacgca tcggcctcgg
     1381 cgatcgacgc gccgaggagg agctcgtccg gcgttatcaa cgcggcttga tctatctact
     1441 gagacgccgc acgcgcgatc cgcagctcgc gctcgacctc gcgcaggaaa cgttccgcat
     1501 tgcgatcgag aagctgcgcc aggcgccgat cgagcaggtc gaccgggtgg gcgcgtatct
     1561 gcgcggcacg gcgctgaatc tggcgagcgc cgacgtccgg aagcacacgc gccggggaac
     1621 gacggcggac tccgatgcca ttgacgctgc cgccgacgat gcggcggggc cgttcgacca
     1681 cgtttccggc gagcaggtgc agcgcctcgt gcgcaggctg ctcgacgagc tgccggtgcc
     1741 gcgcgaccgc gaaatcctga tcaagacgta cctcgaggat caggacaaga gcgcgatttg
     1801 cgaagcgctc ggcgtcgatt ccgcgcacta caatcgcgtg ttgttccggg ccaagcaaag
     1861 atttagagat ctgctaacta ccgcggcttc gcaacgcggt ctgaaagtgg tcgagtagct
     1921 gagagaatcg gcgtacgcac gtcactatac gggtatggat cgacagtaca ttcaggataa
     1981 cgaagtcatc gagcgctacc tgtcgggcgc gctcacggcc gctgaggagc aggccttcga
     2041 ggaggcctat ctcggtgacc cggagctctt ggatcaggtg caggcggcgg agcggctgcg
     2101 cgagggcatc aaggagctcg atggggccgg tcgcctcgag cggctgcgag cgccggcgcg
     2161 gtggcggcat tggctggcct cgccgcaata cgcggctgct gcgtcggtgc tcctcgcggt
     2221 gacgctgggc ttctcggcgg tgctgtaccg cgagaacctc gccttgcggc aggacgatct
     2281 cctgcggggt tcggcgacca tgcggctcgt ggggctcgac ggggtgcgag gtggcaatgg
     2341 cccggaactc tcggctcccg cgccggatga attgaccgtg ctgcagctgg acgccggcat
     2401 agtggcgtac gacacgtatc gtggagtgct gacacgcggc gcaggcgcgc agtccgagac
     2461 gatctggaac cgtgccgacc tgatggcgcg ctccgatgga acgattttga tcggccccgt
     2521 gccggctcgt gccttgctgc cgggaagcta cgtggcgcgg ctcgacggcc ggatgaatgc
     2581 ctggcccgcc gagcgcttcg acgagatcgg gcgcacggac ttcacagtgg ttccgcgaga
     2641 ctgagagttg agcccggcat ccggggctgg atcgtcacgt gagatgaatc gcgtacacgc
     2701 gacactatcg ggtaaggacc caagtgtgcg tggccgccat gaccattatc ctctctacct
     2761 ggctcgccat tccgccgtac cccgcgtgcg gtgagcccct catatggcac ctttgccgtt
     2821 acgcgatctt gcggtttcgc aagacctatg cgaatgtcaa atggtccagc atctccaact
     2881 cgaacgaaga gctcggttcg gatccggaaa cgttccgttc gttcacgagt cgcgttcgcc
     2941 gcaaaggggc agctgagtga gcagcggctt ggtcgcatcg ctcgtagagg gccgaggctt
     3001 tttgttggct ctcctctgcg cccccgtcgt tgcgctcggg caagcttctg cgcccgctcc
     3061 ggtggcgtta tccattgacg aaacggcgag cgcaacgcag cgcgcggaag agagg
//
LOCUS       DATCUD010000610         4146 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_84136, whole genome shotgun sequence.
ACCESSION   DATCUD010000610 DATCUD010000000
VERSION     DATCUD010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4146
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84136"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..230)
                     /locus_tag="VIQ99_08910"
     CDS             complement(<1..230)
                     /locus_tag="VIQ99_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004151067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEY9183306.1"
                     /translation="MITPRIAEVLALDPAITAKILRIANSPMYARQRKTENLKQALMV
                     IGLNATISLALSFSLLKSWQSTDQAGGLDYPL"
     gene            417..1100
                     /locus_tag="VIQ99_08915"
     CDS             417..1100
                     /locus_tag="VIQ99_08915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183307.1"
                     /translation="MNGNPAAWIDLSGVAKTYGRQPVLEGAHLTVAKGCALAVVGRSG
                     SGKSTLLRLIGGLEAADVGTIRVDGTDLTKLTESERALWRRADLGFVFQSFNLIPTLT
                     ATENVELPLALNAVPPDVARSRALNLLAELGLTSGADRFPEDLSGGEQQRVAIARAVI
                     HEPKLVLADEPTGNLDAETAKQVLTLLRRTCHSRDATLIVATHSAEVAARADRVVSIV
                     SGKIEDAAL"
     gene            1097..3592
                     /locus_tag="VIQ99_08920"
     CDS             1097..3592
                     /locus_tag="VIQ99_08920"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9183308.1"
                     /translation="MIAQLRKASLRFYLRHPWQLGLAILGVALGVGVYVGVSLANDAA
                     ASAFDVAASRIRGQITHRLVPLDGALDEREYRELVLRHGVAAAPVIERDVGIAGRPGL
                     TVPLLGLDLLQAGMTSLGSGAGFALAPLIAEPGTVLLPDALADELRIDRDAPLTLIVA
                     GRDVTLRVIGRTPIGAADVGEEPPLLADIATAQEVLGYHGRLDRIDMRLTEAEASALA
                     GVTFSNALLVPVEAERSSFRELTAAFRTNLTALGLLALVVGSFLIYGTMAFAVVQRTS
                     TLGVLRALGVSRGEMVRCVLFEASAIAVVATLLGLGLGHVLAIGLVDLVLRTIGDLSF
                     GRAVAVMDPSPWIYAQGVALGLGATLLAAVKPALDAARAAPALALRRAALERRARAGA
                     RRGVPLAVALLVASGLTLAFGPSDLYVAFGALFGVLAAGALLTPMMTVALMRAIDRAV
                     GRRLGLPVTLAIRGVGASLSRTGVATAALAIAVATVNGVGLMIGSFRTSLDAWLDTTL
                     TADVYVSSAEGMRLGELVESQQLAAIPGVEGLALTRARMLPTPRGDLAIRAVAPGDRG
                     FGLTVVAGDPEVAVTELAAGRAVLASERLLLARGLVVGDQLELPTPSGSVRLPVAGAF
                     RDFNTGEPSVVVALARYRREWQDAELTGIGLDVAAGVDVASVEAAVRSLLPSREARVR
                     SSAGIKRVSLEIFDRTFKVTEVLRILAGIVAFLGILSALLAIELERARELSVLRTIGF
                     TPRSLGATLLTQTGLLGFAAGLAAVPIGTVLALLLVEVINRRSFGWSMDFVVTPGALG
                     SGLLLAIAAALLAGIYPSWRASRIELGSALREE"
     gene            3592..>4146
                     /locus_tag="VIQ99_08925"
     CDS             3592..>4146
                     /locus_tag="VIQ99_08925"
                     /inference="COORDINATES: protein motif:HMM:NF018805.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid 1,2-hydratase"
                     /protein_id="HEY9183309.1"
                     /translation="MRKRCPLLAVLLTIAACGNVPQEAAVEQPSNTGLRYLGGSAESG
                     FARATQPREFVFPADHASHPDYRSEWWYFTGNLATAAGRHFGFELTFFRFAAAPPSPG
                     SEGASAWRTEQIWMAHLAVTDSAGRRFFARERLSREALDLAGATAAPLRVWVQDWSAV
                     GEQRDDMLAFRLEAHDEPVGLSLDV"
BASE COUNT          619 a         1353 c         1419 g          755 t
ORIGIN      
        1 tagagggggt agtcaagtcc gcccgcttgg tcggtgctct gccaagactt caatagcgag
       61 aacgacagcg cgagtgaaat cgtcgcgttc aaaccgatca ccatcagagc ctgcttcagg
      121 ttttcggtct tgcgttgccg agcgtacatc ggggaattcg cgatgcggag gatcttcgcc
      181 gtgatggcgg gatcgagcgc gagcacctcg gcgatccgag gcgtaatcaa agcgaaccct
      241 cttccagata gcgcgccaaa cccaggcgac tgcgcccgct ccgtacaagg tcggccggcc
      301 ctggccaaac ttaagaggag ttgacataac aagacttcgg tgagcgcgcc ccgtaagctc
      361 tggctctcga ggtgccgagg accccggttg ttgcaccgtc gtcgtacgat cgcgccatga
      421 acggcaatcc ggcagcatgg atcgacctta gcggcgtcgc caagacctat gggcggcaac
      481 cggttctcga aggcgcccat ctgaccgtcg caaagggctg tgcgctcgcc gtcgtcggcc
      541 gcagcggctc cggcaaatcg acgttgctgc ggttgatcgg cggcctcgag gcggccgacg
      601 tgggcacgat acgggtcgat ggcacggatc tgacgaagct gaccgaaagc gagagagcgc
      661 tttggcggcg cgccgacttg ggcttcgtgt ttcaatcctt caatctgatt ccgacattga
      721 ccgcgaccga gaacgtcgag ctgccgctcg cgctgaacgc cgtgccgccc gacgtcgccc
      781 ggagccgcgc gctcaatctc ttggccgagc tcgggcttac gagcggtgcc gatcgattcc
      841 ccgaggacct atccggcggc gagcaacaac gagttgcgat tgcgcgcgcg gtcattcacg
      901 aaccaaagct ggtgctggcg gacgagccga ccggcaatct cgacgccgaa acagcgaagc
      961 aagtgctaac tctgcttcgc cgaacttgcc acagccggga cgccacgttg atcgtggcca
     1021 cacacagcgc cgaggtcgct gcgcgcgcgg atcgtgtcgt ttcgatcgtg agcgggaaaa
     1081 tcgaggacgc ggcactttga tcgcacagct tcgcaaggct tcgctgcgat tctatctgcg
     1141 ccacccgtgg cagctcggac tcgcgatctt gggtgtagcc ctcggcgtcg gcgtgtacgt
     1201 gggtgtgagc ctcgcgaatg acgcggcggc gagcgcattc gatgtggcgg cctcgcgcat
     1261 tcgggggcaa atcacgcacc gactggtccc gctcgatggc gcactcgacg aacgcgagta
     1321 tcgcgagctc gtgctccgcc acggcgtcgc agccgctccc gtcatcgagc gcgacgtcgg
     1381 cattgcgggg cggcccgggc tgaccgtgcc attgctcggg ctggatctgc tgcaagccgg
     1441 catgacgagc ctcggatcgg gtgcgggctt cgcactcgcg ccgttgatcg ccgaacccgg
     1501 tacggtgctg ctgccggacg cgctggccga cgagctgcgc atcgatcggg acgcaccgct
     1561 gacgctgatc gtagccggac gcgacgtcac cctgcgcgtg atcggccgca ctccgatcgg
     1621 cgccgcggac gtcggcgagg aaccgccgtt gctcgccgac atcgcgacgg cccaggaggt
     1681 attggggtat cacgggcgcc tcgaccgcat cgacatgcga ctcacggagg cggaagcaag
     1741 tgcactcgcc ggcgtgacgt tttcgaacgc gctactcgtg cccgtcgagg ccgagcgcag
     1801 cagcttccgc gagctgacag ccgcgttccg cacgaatctc acggctctcg gcttgttggc
     1861 gctcgtcgtc ggctcgttcc tgatctacgg aacgatggcc ttcgcggtcg tgcagcgtac
     1921 gtccacgctc ggtgtgctgc gcgcactcgg tgtgtcgcgc ggcgagatgg tccgctgcgt
     1981 gctcttcgaa gcgagcgcca ttgctgttgt cgcaaccctg ctcgggctcg ggctcggtca
     2041 tgtgctcgcg atcggcctcg tcgacctcgt gctgcgcacg attggggatt tgtcgttcgg
     2101 cagagccgtc gccgttatgg acccctcgcc ctggatctac gcccagggtg ttgcactcgg
     2161 cctcggtgcg accttgctgg ccgcggtaaa accagcgctc gacgccgcgc gcgcggcgcc
     2221 ggccttggcg ttgcggcgcg cggcgctcga gcgacgcgca cgtgccggcg cacggcgcgg
     2281 cgtgccactg gccgtcgcac tgctcgtcgc gagcgggctc acgttggctt tcggtcccag
     2341 cgacctatac gtcgcattcg gtgcgctgtt cggcgtgctc gcggccggcg cgctgctgac
     2401 gccgatgatg acggtcgcac tgatgcgcgc aatcgatcgt gcggtcggcc gccgattggg
     2461 gcttcctgtc acgctcgcga tccgaggcgt aggcgcgtcc ttgagccgga ccggcgtcgc
     2521 cactgcggct ctcgccatcg cagtggcgac cgtaaacggc gtcgggctca tgatcggcag
     2581 ctttcgcacg agcctcgatg cttggctcga cacgacgttg acggccgacg tctatgtcag
     2641 cagcgcggag ggcatgcggc tcggcgagct cgtcgaatcc cagcagctcg ccgcgattcc
     2701 cggtgttgag ggtctagcgc tgacgcgcgc acgcatgctg ccaacgccgc gcggcgacct
     2761 cgcgattcgc gcggtcgcac ccggtgatcg cggattcggt ctgacggtcg tcgcggggga
     2821 tcccgaggtt gccgtgaccg agctcgcggc cgggcgcgcc gtgctggcgt cggagcgctt
     2881 actgctggca cgcggtctgg tcgtcggaga ccagctcgag ctgccgacac cgtcgggatc
     2941 ggtgcggctc ccggtcgcag gcgcatttcg cgacttcaac accggcgagc cgtcggtggt
     3001 cgtggcgctc gcacgctatc ggcgcgaatg gcaggacgca gagctcacgg gtattggcct
     3061 cgacgtcgca gccggtgtcg acgtggccag cgttgaggcc gccgtccgct cgttgctgcc
     3121 cagtcgcgaa gcccgggttc gttcgagcgc tggaatcaaa cgcgtctcgc tcgagatatt
     3181 cgaccggacc ttcaaagtca cggaggtgct tagaatcctc gccggcatcg tcgcgtttct
     3241 cgggatcctg agtgcgctac tcgcgatcga gctcgagcgg gctcgcgagc tcagcgtcct
     3301 gcgaacgatc ggcttcacgc cgcgaagcct cggcgcgacg ttgctgacac aaacgggatt
     3361 gctcggattt gcggccgggc tcgccgccgt cccgatcggc accgtactcg cactactgct
     3421 cgtcgaggtg atcaaccgcc gctcgttcgg ttggagcatg gacttcgtcg tgacaccggg
     3481 ggccttgggg tcaggattac tactggccat cgccgcggcg ctgctggccg gcatctaccc
     3541 atcgtggcgc gcaagccgta tcgagctcgg ctctgcactt cgggaggagt gatgcggaag
     3601 cggtgtccgc tgttggcggt gctattgacg atcgcggctt gcgggaacgt gccgcaggag
     3661 gcggccgtgg aacagccgtc caacacgggt ctacgctacc tcggcggaag cgccgagagc
     3721 ggcttcgcac gggcgacaca accccgggag tttgtttttc cggcggacca cgcgagtcat
     3781 cccgattacc ggtccgagtg gtggtatttc accggcaatc tcgcgaccgc ggccgggcgc
     3841 catttcggct tcgagctcac gttcttccgc ttcgcggcgg cacctccgtc gccagggtcc
     3901 gaaggcgcct cggcttggcg cacggagcag atctggatgg cacatctcgc ggtcacggat
     3961 tcggccgggc ggcggttctt cgcgagggaa cgactttcgc gcgaagcgtt ggatctcgcc
     4021 ggagctaccg ccgcgccgtt gcgcgtgtgg gtccaggatt ggtctgcggt cggcgagcag
     4081 agggacgaca tgctcgcgtt tcgcctcgag gcgcatgacg agccggtcgg tttgtcgctc
     4141 gacgtc
//
LOCUS       DATCUD010000611         2393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41543, whole genome shotgun sequence.
ACCESSION   DATCUD010000611 DATCUD010000000
VERSION     DATCUD010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41543"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /gene="gmk"
                     /locus_tag="VIQ99_08930"
     CDS             <1..564
                     /gene="gmk"
                     /locus_tag="VIQ99_08930"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR03263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEY9183310.1"
                     /translation="VKALLDRDPTLRFSISYTTRAPRNSEVDGRDYFFVSPDRFEEMV
                     RENAFLEHARVFDNSYGTGRDHVAGLLAAGFSVVLEIDWQGARQVRKAFPSQSVFILP
                     PSVAELERRLRGRKTDSEAVIERRLRDALADMTHWTEFDHVIVNDDFASALERLAAVI
                     NGTDGGATRTDLPAVRAVAEAIVAGKS"
     gene            637..936
                     /gene="rpoZ"
                     /locus_tag="VIQ99_08935"
     CDS             637..936
                     /gene="rpoZ"
                     /locus_tag="VIQ99_08935"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY9183311.1"
                     /translation="MARITVEDCLEKVPNMFQLVLVAAKRARQLANGAHPMVDWENDK
                     PTVVALREIADGYITEEILTQRDKPVEDILAADLAAVTPMSPDDLLGSRPVSIGD"
     gene            986..>2393
                     /locus_tag="VIQ99_08940"
     CDS             986..>2393
                     /locus_tag="VIQ99_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018718677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0015968 - stringent response [Evidence
                     IEA];
                     GO_process: GO:0015969 - guanosine tetraphosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT family protein"
                     /protein_id="HEY9183312.1"
                     /translation="MDYGAVIRDRMLSSVWRTDDFGRLLTQLDYLPKSDLPSITEAYE
                     FSAKAHQGQQRRNGDPYISHPVAVAEILAGLHLDSSSIKAALLHDVVEDTASTLTDIQ
                     GKFGEDVALLVDGVSKIDHLRFDSAAEAQAESFRKMLLAMAKDLRVILVKLADRTHNM
                     RTIQSLPLVKQRRIARETLDIYAPIANRLGVYSIKLELEDLGFKTYYPYRYKVLERSL
                     RRAKGNQRQLLRKIESKLTETLADAKISARVVAREKHLYSIYLKMQRKAAHLSDIVDV
                     YGVRVIVDDVDSCYRALGLAHQLFKPMPGRFKDYISIPRVNGYQSLHTTLFGPNGLPL
                     EVQIRTEGMDKVAERGIAAHWQYKAADSETHSTEERAREWLAGLMEMERAANSEEFLE
                     TVKADLFPDKVYVFTPKGAIMRLPRGATAVDFAYAVHTDIGNRCVAAKIDRRAVPLKT
                     QLENGETVEIVTQRGAHPN"
BASE COUNT          448 a          768 c          775 g          402 t
ORIGIN      
        1 gtcaaggcat tgctcgatcg cgacccgaca ttgcggttct cgatctcgta cacgacgcgc
       61 gcgccgcgca actcggaggt cgacggacgg gactacttct tcgtctcgcc ggaccgcttt
      121 gaggagatgg tccgggagaa cgctttcttg gagcacgctc gcgtgttcga caactcctat
      181 ggaactggcc gcgaccacgt cgccggcctg ctcgcggcgg gcttttcggt cgtcctcgag
      241 atcgactggc aaggcgcgcg gcaggtgcgg aaggccttcc cgtcacagag cgtgttcatc
      301 ttgccgccga gcgtcgccga gctcgagcgg cgcttgcgcg ggcgcaagac cgactcggag
      361 gccgtgatcg agcggcggct gcgggacgcg ctggccgata tgacgcattg gacggagttc
      421 gatcacgtga tcgtgaacga cgacttcgcg tccgcgctcg agcgcctggc cgccgtgatc
      481 aacggcaccg acggcggcgc cacgcggacc gatttgccgg ccgtccgggc cgtggcagag
      541 gcgatagtgg ccggaaaatc ctgaacgccc tccttgccgg ccccgggggg tgctgcatta
      601 gactaacggg tccggtgccc aggagggctg tctcgcatgg caagaatcac cgtcgaagac
      661 tgtttggaga aagtcccaaa catgttccag ctcgtgctcg tggccgcgaa acgcgcccgc
      721 cagcttgcca acggcgcgca tccgatggtg gattgggaga acgacaagcc caccgtcgtc
      781 gctctgcgcg agatcgcgga cggctacatc acggaagaga ttttgacgca gcgtgacaag
      841 ccggtcgaag acattctcgc ggccgacttg gctgccgtga ctccgatgtc gcccgacgat
      901 ttgctcggct cgaggcccgt gtcgatcggc gactgaccgc tcactgacaa agggccggcc
      961 aacgggccgg tgatagctag acgccatgga ttatggtgcc gtcatccgcg atcgcatgtt
     1021 gtcgtcggta tggcggacgg acgacttcgg gcgtctgctg acgcagctcg actacctgcc
     1081 gaagagcgac ctgccgagca tcaccgaagc gtacgagttc agcgcgaaag cgcatcaggg
     1141 tcagcaacgc cgcaacggcg atccctacat ctcccacccg gttgcggtag ccgagatcct
     1201 cgcgggcctg cacctcgact cgagctcgat caaggcagcg ctgctgcacg acgtcgtcga
     1261 ggacaccgcg agcacgttga cggacatcca aggcaagttc ggcgaggacg tcgcgctgct
     1321 cgtcgacggc gtcagcaaga tcgatcatct gcgcttcgac agcgctgcgg aagcccaagc
     1381 cgagagcttt cgcaagatgc tgctcgcgat ggcgaaggac cttcgcgtca tcctcgtgaa
     1441 gctcgcggac cgcacccaca acatgcgcac gatccaatcc ctgccgctcg tgaaacagcg
     1501 acggatcgcg cgcgagacgc tcgatatcta cgcgccgatc gcgaatcgcc tcggcgtcta
     1561 ctcgatcaag ctcgagctcg aggatctcgg gttcaagact tactatccgt atcgctataa
     1621 ggtgctcgag cgctcgttgc gccgtgcgaa gggcaaccag cgtcagctgc tgcgcaagat
     1681 cgagagcaag ctgaccgaga cgctcgcgga cgcgaagatt tcggcgcgcg tcgtggcacg
     1741 cgagaaacat ctctacagca tctacttgaa gatgcagcgc aaggccgcgc acctctccga
     1801 catcgtcgac gtgtacggcg tgcgcgtgat cgtcgacgac gtcgacagct gctatcgcgc
     1861 gcttgggctc gcgcaccagc tgttcaagcc gatgccgggc cggttcaagg actacatctc
     1921 gatcccgcgg gtcaacggct accaatccct gcatacgacc ttgttcggcc cgaacggtct
     1981 gccgctggag gtgcagattc ggaccgaggg catggacaag gtcgccgagc gcggcatcgc
     2041 ggcgcattgg caatacaagg ctgctgactc ggagacccat tcgaccgagg agcgtgcgcg
     2101 cgagtggctg gccgggctca tggagatgga gcgcgccgcg aactccgagg agtttctcga
     2161 gaccgtcaaa gcggatctgt ttccggacaa ggtctacgtg ttcacgccga agggcgcgat
     2221 catgcggctg ccgcgcggcg cgaccgccgt cgacttcgcg tacgccgtgc acaccgacat
     2281 cggcaatcgc tgcgtcgcgg ccaagatcga tcggcgtgcc gtgccgctca agacccagct
     2341 cgagaacggc gagaccgtcg agatcgtgac gcaacgcggg gcgcacccga atc
//
LOCUS       DATCUD010000612         2875 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98614, whole genome shotgun sequence.
ACCESSION   DATCUD010000612 DATCUD010000000
VERSION     DATCUD010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98614"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            54..>2875
                     /locus_tag="VIQ99_08945"
     CDS             54..>2875
                     /locus_tag="VIQ99_08945"
                     /inference="COORDINATES: protein motif:HMM:NF024915.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183313.1"
                     /translation="MSRAPYLALLAIAAVWPASARDKDSEPTGTIKDLERRTVEVDTS
                     AAIVGSEAKAMESYRSFLDLASEDPLLRAEAMRRLADLQLETVDLDQLASNVQSLGSL
                     GNTIQMYEQLLESYPNYAKNDLVMYQLARAYEAEGRIDDSLATLDRLIAKYPNTVNRD
                     EAEFRRGETLFVAKRYRESERAYAHVIEAGPDSPFYEQALYKHGWTLFKQQQYEESFP
                     SFFGLLDRQLGTDNTATGDRDPAVLYSAMGRAQQELVDDTFRVLSIGFSYLDGPESIT
                     RYFNRQGARPYAFIAYTNLGDLYLEQERIQDAADAYRAFVDLDAYHAKAPLLQVEVIE
                     AFKKGEFADLVLEGKESFVETYGSGSPYWQRFTFEQQPEVVAHLKSNVTDLAAYHHAE
                     AQKTHEPAEYAAAARWYRSYLQSFPDDTNAPHTNFLLGEVLYESGNYRDAAFEYERTA
                     YAYPFHPEGSEAGYAALLAYAKHESELDPEARGEWHRNGIDSALRFATTYPTHPQAAT
                     VETDAAEKLFALGDFARARDVGRQVVAHSPPVEAKLQRTAWTVVAHSEFDLGDFAAAE
                     QAYVQLAAFVPAVDPQRGEVTERIASSIYKQGEQARAAGDLSTAVDHFLRVGQAAPSS
                     SVRATAEYDAGAALISMGDWDRATTVLEGFRNTFPNHELAADVTASLAVAYVEVGNSA
                     RAAGEFDRIAEGDGPVEVKREALWRSAELYESTGQTAAAATAYSRFVERYPQPVAESI
                     EARQKLIDLAAASGNHAERARWMRDLVVADAAAGAERTDRTRYLAAKSQLELAAPSRD
                     AFLGTRLVVPLDKSLAAKQTRMEEALNAYSQAADYGVAEVTTAATYEIAELYHSLSKD
                     LYASERPPELTEEELEQYDILLEEQAFPFEEESIELHETNAARVSDGIYDEWVKKSYA
                     ALAELSPGRYAKAELGATVVAAIGTSA"
BASE COUNT          521 a          942 c          986 g          426 t
ORIGIN      
        1 gaacgtggcg ccgccggaag ccgagaacgc cgtcgcgaac gcgggggcgg gcaatgagta
       61 gagcgcctta cctcgccctg ctcgcgatcg ccgccgtgtg gccggcgagc gcacgcgaca
      121 aggactccga gccgaccggc acgatcaagg acctcgaacg gcgcacggtc gaggtcgata
      181 cgtcggccgc gatcgtcggc agcgaagcga aggcgatgga gagctatcgg tcgttcctcg
      241 atctcgcgtc cgaggacccg ctgctgcgcg ccgaggcgat gcgacggctc gccgacttac
      301 agctcgagac ggtggacctg gaccagcttg cgagcaacgt ccagtctcta gggtcgctcg
      361 gcaacacgat tcagatgtac gagcagctac tcgagtcgta tccgaactac gcgaagaacg
      421 acctcgtgat gtaccagctc gcccgcgcct acgaggccga ggggcgcatc gacgactcgc
      481 tagcgactct cgaccgtttg atcgcgaagt acccgaacac cgtgaaccgc gacgaggcgg
      541 agttccggcg cggcgagacg ttgttcgtcg cgaagcgcta tcgcgagtcg gagcgtgcct
      601 acgcgcacgt gatcgaagca ggtccggact cgccgttcta cgagcaggcg ctgtacaagc
      661 acggttggac tttgttcaag caacagcagt acgaggagag cttcccgtcg ttcttcggcc
      721 tgctcgatcg acagctcggc accgacaaca cggcgaccgg cgatcgagat cccgccgtgc
      781 tgtactcggc gatgggccgc gcgcagcagg agctcgtcga cgacacgttc cgcgtgctgt
      841 cgatagggtt ctcgtacctg gacgggcccg agtcgatcac gcggtatttc aatcggcaag
      901 gggctcggcc ttacgcgttc atcgcctaca cgaacctcgg cgacctctac ctcgagcagg
      961 agcgcatcca ggatgcggcc gacgcctacc gcgcgttcgt cgatctcgac gcgtaccacg
     1021 cgaaggcgcc gctgctgcaa gtcgaagtga tcgaggcgtt caagaagggc gagttcgccg
     1081 acctcgtgct cgaggggaag gagagcttcg tggagaccta cgggtccggc agcccgtact
     1141 ggcagcgctt caccttcgag caacagcccg aggtcgtcgc gcacttgaag agcaacgtga
     1201 ccgaccttgc cgcgtaccat cacgcggaag cgcaaaagac gcacgagccc gccgaatacg
     1261 cggcggcagc tcgttggtat cgcagctatc ttcaatcgtt cccggacgac acgaacgcgc
     1321 cgcacacgaa tttcctgctc ggcgaggtgc tgtacgaaag cggcaactac cgcgatgccg
     1381 cgttcgagta cgagcgcacg gcgtacgcgt atccgttcca tccggagggc agcgaggccg
     1441 gctacgcggc gctgctcgcg tacgcgaagc acgagagcga gctcgatccc gaggcgcgcg
     1501 gcgaatggca tcgcaacgga atcgacagcg cgctgcggtt cgcgaccacg tatcccacgc
     1561 acccgcaggc ggcgacggtc gagacggacg cggcggagaa actgttcgcg ctcggcgact
     1621 tcgcgcgcgc ccgcgacgtc ggccgacagg tcgtcgcgca ttcgccgccc gtcgaggcga
     1681 agctacagcg aacggcttgg acggtcgttg cccactcgga attcgacctc ggggatttcg
     1741 cggccgccga gcaagcctac gtgcagctgg cggcgttcgt gccggccgtc gatccgcagc
     1801 gcggcgaggt cacggagcgc attgcgtcgt cgatctacaa gcagggcgag caggcgcgcg
     1861 cggccgggga cttgagcacc gccgtcgatc acttcttgcg cgtcggccaa gccgcgccgt
     1921 cgtcgtccgt gcgcgcgacg gccgagtacg acgccggcgc cgcgttgatc tcgatgggcg
     1981 attgggaccg cgccacgacc gtgctcgaag gtttccgcaa cacgttcccg aaccacgagc
     2041 ttgcggctga cgtgacggcg agcctcgccg tcgcctacgt cgaggtcggc aacagcgccc
     2101 gtgccgcggg cgagttcgat cgtatcgccg agggcgacgg ccccgtcgaa gtcaagcgcg
     2161 aagcgttgtg gcgctcggct gagctctacg agagcacggg ccagaccgcc gcggccgcga
     2221 cggcttacag ccggttcgtc gagcgctatc cgcagcccgt ggccgaatcg atcgaggcgc
     2281 gacagaagtt gatcgatctg gcagcggcgt cgggcaatca cgccgagcga gcgcgctgga
     2341 tgcgcgatct cgtcgtggcc gacgcggcgg ccggcgccga acgcacggat cgcacgcgtt
     2401 atctcgcggc caagtcgcag ctggagctcg cggcgccgtc gcgcgacgcg tttctgggca
     2461 cgcgactcgt cgtgccgctc gacaagagcc tcgccgcgaa acagacgcgc atggaagaag
     2521 cgctgaatgc gtactcgcag gccgcagact acggcgtcgc cgaggtcacg acggccgcga
     2581 cgtacgagat cgcggagctg tatcactcgt tgagcaagga cctgtacgcg tccgagcgtc
     2641 cgcccgagct gacggaggag gagctcgagc agtacgacat cctgctcgag gagcaggcgt
     2701 tcccgttcga ggaggagtcc atcgagctcc acgagacgaa cgcggcgcgc gtgtcggacg
     2761 gcatctatga cgagtgggtc aagaagagct acgcggcgct ggccgagctg tcgccgggac
     2821 gttatgcgaa agcggagctc ggcgcgaccg tcgtcgccgc aatcgggacg tcggc
//
LOCUS       DATCUD010000613         2476 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98617, whole genome shotgun sequence.
ACCESSION   DATCUD010000613 DATCUD010000000
VERSION     DATCUD010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98617"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2259)
                     /locus_tag="VIQ99_08950"
     CDS             complement(<1..2259)
                     /locus_tag="VIQ99_08950"
                     /inference="COORDINATES: protein motif:HMM:NF038125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="THxN family PEP-CTERM protein"
                     /protein_id="HEY9183314.1"
                     /translation="MSPGDAIIATVLGRGHGFLSRRALVSALAALVLTNGASAADITY
                     SSVTGIWHDPVDNLPGSQPGDPVITNGSPTSIIRWGDTTGSQSGYDFTATIPPPFTLP
                     GPIPFFSLGSFTHRNFEVGDPSLTSVQLDVVLVISVDGVPRPPLTFTFTFNHEETPNN
                     QTPCPYPTPVGEGCTDRVTIVASPTPTTFNVDGVDYTLSMSFLNNGNPVSEFITREGG
                     TINSSGLVGEFTVPPLPPGTPLLTVDKSGPPTMNPGEWGSFTIDAQNAGNVDAFNVTL
                     LDRLPDAPTGGMCDTTPEILSARVFASDGVTPVPGKGPLSQGTDYSLAYNGATCELRL
                     STITAAAVIGVGERLIVAYRAMLDASFQYGTALTNVAGATEWYNGPTSNPTRLTYTRT
                     LTNGTVGVVDHEDAHTVVIVPRLYADKAAALQVDAMSPGIVDPGDVLRYTIRIQNNGT
                     LPITQAMLRDAVPANTTYLADSMTLNGLPVGVPDGGVSPLILGLDVSTPGAGAGTLVA
                     GQMATVQFDLRVDDGVPPGTVIVNQAVVDTLELPDLLTDGDGNPATGPEPTVVVVGNL
                     QELRITKNVAVVGGGPALAGATLEYVVQVTNVGTLPAYEVEIRDDIAVPTPGYLAFVD
                     QSWTLNGSTTGTAVVGTLLTADYSTTYGALQPGRTITLRFRAVLDAGLAVGTRVTNTG
                     TVYWNDPDQTASATVAIDVGGIPGVGFVNGRVWHDADFDRIYDANELALAGWEVELYL
                     NGSLAHSARTSAD"
     regulatory      complement(2335..2434)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
BASE COUNT          417 a          810 c          821 g          428 t
ORIGIN      
        1 gtcggccgaa gtgcgcgccg agtgcgcgag ggagccgttc aggtagagct cgacctccca
       61 acccgcgagc gcgagctcgt tcgcgtcgta gatgcgatcg aagtccgcgt cgtgccagac
      121 gcgcccgttg acgaagccga cgccggggat gccgccgaca tcgatcgcga cagtcgcgct
      181 cgccgtctgg tcggggtcgt tccagtagac cgtgcccgta ttcgtaacgc gtgtgcccac
      241 ggccaagccc gcatcgagca cggcgcggaa ccgtagcgtg atcgtgcgcc ccggctgcag
      301 ggcgccatag gtcgtcgagt agtctgcggt cagcagcgtg cccaccacgg cggtcccggt
      361 cgtcgagccg ttcagagtcc acgactgatc cacgaacgcg aggtatcccg gcgtcggcac
      421 cgcgatgtcg tcgcggatct cgacctcgta ggccggcagc gtgccgacgt tcgtgacttg
      481 gacgacgtac tcgagcgtcg cgcccgcgag cgctggccct ccaccgacga ccgcgacgtt
      541 cttcgtgatc ctgagctcct gtaggttgcc gacgacgacg accgtgggct cgggacccgt
      601 cgcggggttg ccgtcgccgt ccgtgagcag gtccggcagc tccagggtgt ccacgacggc
      661 ctgattcacg atcaccgtgc cgggcggcac gccgtcgtcc acgcgcaggt cgaactgaac
      721 cgtcgccatc tggccggcca ccagcgtgcc ggcgccggct cccggcgtgc tcacgtctaa
      781 ccctaagatc agcggcgaca caccgccgtc tggaacgccc acaggcaggc cgttcagcgt
      841 catcgagtcc gcgaggtagg tcgtgttcgc gggaaccgcg tcgcgcagca tcgcctgcgt
      901 gatcggcaga gtgccgttgt tctgaatcct gatcgtgtag cgcagcacgt caccggggtc
      961 gacgatgccg ggcgacattg cgtcgacctg cagcgcggcc gccttgtccg cgtacagccg
     1021 cggcacgatc acgaccgtgt gcgcgtcctc gtggtcgacg acgcccaccg tgccgttggt
     1081 cagcgtgcgc gtgtaggtga ggcgagtcgg attcgacgtg ggaccgttgt accactcggt
     1141 tgcgccggcg acgttcgtga gcgccgtgcc gtactggaaa ctcgcgtcca gcatcgcgcg
     1201 atacgcgacg atcagccgct cgccgacgcc gatcacggcc gccgccgtga tcgtgctgag
     1261 cctgagctcg cacgtagcgc cgttgtaggc gagagaatag tccgtaccct gcgacagagg
     1321 gcccttgccc ggcaccggcg tcacgccgtc ggacgcgaac acgcgcgcgc tcaagatctc
     1381 cggcgtcgtg tcgcacatcc caccggtcgg cgcgtcgggc agccgatcga gcagcgtcac
     1441 gttgaacgca tcgacgttcc ccgcgttctg cgcgtcgatc gtgaaactgc cccactcgcc
     1501 cggattcatc gtcggcgggc cggacttgtc gaccgtcagc aacggcgtgc cgggaggcag
     1561 cggcggcacc gtgaattcgc cgacgagccc cgagctgttg atcgtgccgc cttctcgcgt
     1621 gatgaactcg gacaccggat tgccgttgtt caagaagctc atcgacaacg tgtaatccac
     1681 cccatcgacg ttgaaggtcg tgggcgtggg cgacgcgacg atcgtcacgc ggtccgtaca
     1741 cccctctccg accggcgtcg gataagggca cggcgtctgg ttgttcggag tttcctcgtg
     1801 gttgaacgtg aacgtgaacg tcaatggagg gcgcggaacg ccatccacac tgatcacgag
     1861 cacgacatcg agctgaaccg aagtcaggga tggatcgccg acctcgaagt tccgatgcgt
     1921 gaacgaccca agagagaaga aagggatcgg cccgggcaac gtgaacggcg gcggaatggt
     1981 tgccgtgaag tcatagccgc tctgcgagcc ggtcgtgtcg ccccagcgga tgatcgaggt
     2041 cggcgagccg ttcgtgatga cgggatcgcc gggctgactt ccggggaggt tgtcgacggg
     2101 gtcatgccag attccggtga cggacgagta cgtgatgtcg gccgccgacg cgccgttcgt
     2161 tagaacaaga gcggcgagcg cagaaaccaa cgcacgccgc gacaagaagc catggcctct
     2221 gcctagaacc gtcgcgatta tcgcgtcgcc tggactcatg tcgcctcgtg gcacacgaat
     2281 ggtgacgacg ccatagccaa acgaatcgac tcggccaatg aataggccgg ggattctggc
     2341 ggtcccgcta tcgtggagct ccttccaatg aagtgcgctc gttagaccgg tgactttgcg
     2401 tcgccacctt tcggtggttt tgcccttgtc aaaatcgttt cgagcgctcg gctcagtgtc
     2461 tcgagatact cctcgc
//
LOCUS       DATCUD010000614         1521 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105279, whole genome shotgun sequence.
ACCESSION   DATCUD010000614 DATCUD010000000
VERSION     DATCUD010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105279"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..>1521
                     /locus_tag="VIQ99_08955"
     CDS             116..>1521
                     /locus_tag="VIQ99_08955"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9183315.1"
                     /translation="MPGYQIAISPPIRTRIDMLTTGVRTPVGIKVFGPDLESIERVSL
                     DLEGLLREVPGTRSTFAERQTGREYVDIVPKREAIARFGLRVRDVQDLVEAAVGGMPV
                     STVIDGRARYSVNVRYAADFRGDVGALRALPVPIPTPEPITLGGGDRSGRGITPMPAT
                     ALSPRSPSSSGMAQMGGNEPGMSGAARGGSMTMGPQSFAAAPEDDADRWQQFGSAVPL
                     GEVADVRVVNGPPMIKDENGVLVGYVFADIDAAERDLGGWVQDAKRLVASRVQLPEGF
                     RLQWTGQYEFMEDMQARMRIALPLTAVLIVALLYLALRGWVQTALVLLCVPCALAGSI
                     WLLALLDYNLSTAVWVGVIAVGGVAAQTGIVSLVFLDQAFNDWRTQGRLRSAEDVDGA
                     VLEGAAKCLRPILMTVLTTVLGLMPLLFESGVGADLSARTAAPVVGGLWLCVVLTLLL
                     LPAVYAIWRRHQIGSETRG"
BASE COUNT          225 a          466 c          544 g          286 t
ORIGIN      
        1 gtggcatagc ggcttggcgc cggagtggct gtcgctcggg ctcgggacac tgtggccaga
       61 acaccggcgc cgcgcactgc ccgagctcgt gcgggacctg gatagtgccc tgcggatgcc
      121 cggctatcaa atagcgatct ctccgcctat ccggacgcgc atcgacatgc tgacgacggg
      181 cgtgcggacg ccggttggca tcaaggtatt cggccccgat ctcgagagca tcgagcgcgt
      241 gagcctcgac ctcgaagggt tgcttcgcga agtgccggga acgcgcagca cgttcgcaga
      301 acgccaaacc ggtcgcgagt acgtcgacat cgtgccgaag cgcgaagcca tcgcgcgttt
      361 cggcctgcgc gtgcgcgacg tgcaggatct cgtcgaggct gccgttggcg ggatgccggt
      421 ctcgaccgtc atagatgggc gcgctcgcta ctcggtcaac gtgcgctatg ccgcggattt
      481 ccgcggcgat gtcggggcac tccgcgcact gccggtgccc attccgacgc cggagcccat
      541 aacgctcggt ggcggcgatc ggtccggccg ggggatcacc ccaatgccgg caacggcgct
      601 gtcgccgagg tcgccgagca gcagcgggat ggcgcagatg ggcgggaacg agcccggcat
      661 gagcggggcc gcgcgcggcg gcagcatgac gatgggtcca cagagcttcg cagcagcccc
      721 ggaagacgac gctgatcgct ggcagcagtt cggcagtgcg gttcctctcg gcgaagtcgc
      781 cgacgtgcgc gtcgtgaatg gcccgccgat gatcaaagac gagaacggcg tgctcgtcgg
      841 ttatgtcttc gcggacatcg acgctgccga gcgcgacttg ggaggctggg tgcaggacgc
      901 gaagcgactc gtggccagtc gcgtgcagtt gcccgaaggt tttcgccttc aatggaccgg
      961 tcagtacgag ttcatggagg acatgcaggc gcgcatgcgc atcgcactgc cgctcacggc
     1021 cgtgttgatc gtcgcgctgc tgtatctcgc cttgcgcggt tgggtgcaga cggcgttggt
     1081 gttgctgtgc gtgccttgcg cgctcgcggg aagcatatgg ctgctcgcac tcctcgatta
     1141 caacttgtcg accgccgttt gggtcggcgt catcgccgta ggtggtgtgg ctgcgcaaac
     1201 ggggatcgta agcctcgtgt tccttgacca ggcattcaac gattggcgca cgcagggccg
     1261 actgcgatcg gccgaggatg tggacggcgc cgtgctcgaa ggtgccgcca agtgcctgcg
     1321 cccgattctc atgaccgtgt tgactaccgt gctcggcctc atgccgctgc tcttcgagtc
     1381 cggggttggg gcggacttgt cggctcgcac ggcggctccc gtcgtgggtg gtctgtggtt
     1441 gtgtgtcgtt ctcacgctgt tgctgctgcc tgccgtctac gcgatttggc gacgccatca
     1501 gattggcagt gagacgcggg g
//
LOCUS       DATCUD010000615         1681 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98638, whole genome shotgun sequence.
ACCESSION   DATCUD010000615 DATCUD010000000
VERSION     DATCUD010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98638"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1191)
                     /locus_tag="VIQ99_08960"
     CDS             complement(<1..1191)
                     /locus_tag="VIQ99_08960"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183316.1"
                     /translation="MTPLRFACSLLCGGLVASSAVAHHGIANFDLNKDVAINGTVAKL
                     AFVNPHSWLYVDVVGPDGKTVQWQCEMRAATVLRRSGWSQEMFAVGSTVSVTGSPDRN
                     APNTCYLGTITFADGTSMDRYGQRQKADTTAVAANRPERLPNGDPNLNGDWAGEQRVM
                     TDRRGISGALVPISVADQLAPGEVPQGGRAFPGARGTPESLAENAIEVAWTRPSPVPL
                     TEAGRRAAEGFDPSSTDNPRLRCEPTNILFDWGFETFTNRITQDENAIRIQYGTPGID
                     RTIHLNETAHPANIEPSVTGHSIGRWENDVLIVDTVGFKPGVLSADGRVLHSDQLHVV
                     ERFSLDRATGALRREYYAEDPLYFTGQFRGADTAFVADLPYETPSCDDLSYKTGEGTA
                     AIEQA"
     gene            1300..1614
                     /locus_tag="VIQ99_08965"
     CDS             1300..1614
                     /locus_tag="VIQ99_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011395889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HEY9183317.1"
                     /translation="MELTTLEAVPGKTITRHLGLVQGSTVRSKHAGKDILAGLKNFVG
                     GELKSYTALLNESRSEAVERMVAQAQAVGANAVVNIRFSTSNIAAGAAEVMAYGTAVV
                     IS"
BASE COUNT          281 a          562 c          550 g          288 t
ORIGIN      
        1 ggcctgttcg atcgccgcgg taccttcgcc tgtcttgtag ctcaagtcgt cgcagctcgg
       61 cgtctcgtaa ggcagatcgg cgacgaacgc ggtgtcggcg ccgcggaatt ggcccgtgaa
      121 gtacagcggg tcctcggcgt aatactcgcg ccgcaacgcg ccggttgcgc gatcgagcga
      181 aaaccgttcg acgacgtgaa gctggtcgct gtgcaagacg cggccgtcgg ccgacaagac
      241 accgggcttg aagccgaccg tgtcgacgat cagcacgtcg ttctcccagc gcccgatcga
      301 gtgacccgtg acgctgggct cgatgttcgc gggatgtgcc gtctcgttca gatggatcgt
      361 gcgatcgatg cccggagtgc cgtactggat ccgaatcgcg ttctcgtctt gcgtgatgcg
      421 attcgtgaac gtctcgaagc cccagtcgaa caggatgttc gtcggctcgc agcggagccg
      481 cggattgtcc gtcgacgacg ggtcgaagcc ttcggcggcg cggcgcccgg cctccgtcag
      541 cgggaccggg ctcgggcgcg tccatgccac ctcgatcgcg ttctcggcca acgattcggg
      601 cgtgccgcgc gcgcccggga acgctcggcc gccctgcggc acctcacccg gcgccaattg
      661 atccgccacg ctgatcggca ccagcgcgcc actgatgccg cgtcgatccg tcatcacgcg
      721 ctgctcgccg gcccagtcgc cattcaagtt cgggtcgcca ttcggcagcc gctccgggcg
      781 attcgcggcg acggccgtcg tgtcggcctt ctggcgctgc ccgtagcggt ccatgctcgt
      841 gccgtccgcg aacgtgatcg tgcccaagta gcaggtgttc ggcgcgttgc gatccggcga
      901 accggtgacg ctgacggtac tgcccaccgc gaacatctcc tggctccagc ccgaccggcg
      961 cagcaccgtg gccgcgcgca tctcgcattg ccattgcacg gtcttgccgt ccgggcccac
     1021 gacgtcgacg tacagccatg agtgcggatt cacgaacgcg agcttcgcga ccgtgccgtt
     1081 gatcgcgacg tccttgttca ggtcgaaatt cgcgatgccg tgatgcgcga ccgcgctcga
     1141 agcgacgagc ccgccgcaca gcaacgaaca ggcaaaacgt aacggcgtca tggaacgatc
     1201 cccgaataca gctggctgcg aacactgtga caccggtcga gtgcagtggc aatccacgct
     1261 gtggcacact cgcgccgtcc ctggcgaagg aggttcccga tggagctcac gacactcgaa
     1321 gccgtacccg gaaaaaccat cacgcggcac ttgggattgg tgcagggctc cacggtgaga
     1381 agcaagcacg caggcaagga catcctcgcc ggcctcaaga acttcgtcgg cggcgagctg
     1441 aaaagctata cggcgctact gaacgaatcc cgcagcgagg cggtcgagcg catggtcgcg
     1501 caggcgcagg ccgtcggcgc gaacgcggtc gtgaacattc gcttctcgac gtcgaacatc
     1561 gctgcgggcg cggccgaggt catggcctac ggcaccgcgg tcgtgatcag ctgagccgcg
     1621 cgcgatggaa gcggtcgtcc aaatcggtat cttcgtcgtg ctgctcgcga tcggctggtt
     1681 c
//
LOCUS       DATCUD010000616         3208 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55893, whole genome shotgun sequence.
ACCESSION   DATCUD010000616 DATCUD010000000
VERSION     DATCUD010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3208
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55893"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..738)
                     /gene="dnaJ"
                     /locus_tag="VIQ99_08970"
     CDS             complement(<1..738)
                     /gene="dnaJ"
                     /locus_tag="VIQ99_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011479115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY9183318.1"
                     /translation="MAKRDYYEVLGVERQATEADIKKAYRRLAMKYHPDRNPGNPEAE
                     GHFKEAKEAYEVLCDKEKRATYDRFGHAGVQGSQGMGGGFGAGADAFGDIFGDVFGDI
                     FGGRGRGRNQVFRGADLRYELDLSLEQAVAGDSITLDIPTQVECSRCTGKGAEPGSQP
                     TQCKTCGGAGQVRIAQGFFSIQQTCPNCAGAGTLIDKPCRDCNGRGRVRKTKTLSVKV
                     PAGVDNGDRIRLAREGEAGRNGGPPGDL"
     gene            complement(812..2743)
                     /gene="dnaK"
                     /locus_tag="VIQ99_08975"
     CDS             complement(812..2743)
                     /gene="dnaK"
                     /locus_tag="VIQ99_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002811989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY9183319.1"
                     /translation="MGKVIGIDLGTTNSCVAIMDGGKPKVIENSEGDRTTPSIIAFTK
                     DGEVLVGQTAKRQAVTNPSNTLFAVKRLIGRRFQDDVVQKDVGMVPYKVVKADNGDAW
                     VEVNGKKMAPPEISARVLTKMKQTAEDYLGEKVTEAVITVPAYFNDSQRQATKDAGKI
                     AGLEVKRIINEPTAAALAYGLDKKRGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEV
                     LATNGDTFLGGEDFDKRIIDYLAKEFQKESGVDIRRDPLAMQRLKEASEKAKIELSSR
                     QQTEVNLPYITADASGPKHLNINLTRAKLESLVEDLIEKTIAPCKTALSDAGLKVTEV
                     DDVILVGGQTRMPKVQETVQTLFGKEPRKDVNPDEAVAVGAAIQAGVLAGEVKDVLLL
                     DVTPLSLGIETLGGVMTKLIEKNTTIPTKANQTFSTAEDNQTAVTIHVLQGERGRAAD
                     NKSLGRFDLSDLPPAPRGMPQVEVTFDIDANGILNVSAKDKATGKEQKIVIKASSGLS
                     EDEIKRMVGDAEAHAAEDAKFRELAETRNQADALIHATEKSLRELGDKVAGEERAKIE
                     SALADAKEAIKGDNKAVIETKLKALGEASAGMAQRLYANQQQQGAGAPGGEQSAGGGT
                     ENVVDAEFEEVKDDKPKRS"
     gene            complement(2815..>3208)
                     /locus_tag="VIQ99_08980"
     CDS             complement(2815..>3208)
                     /locus_tag="VIQ99_08980"
                     /inference="COORDINATES: protein motif:HMM:NF013212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY9183320.1"
                     /translation="AELENLRKRSARDVDAARKFGAERLAQAILPVRDSLEAGLAAAE
                     KAGHDALLDGQRATLRLLEEAFNACGIREIAPQGQPFDPTKHEALGLLASVDAPPNTV
                     IEVVQKGYELNERLLRAAKVLVARGEAP"
BASE COUNT          488 a         1100 c          943 g          677 t
ORIGIN      
        1 caagtcgccg ggtggcccgc cgttacgccc ggcctcgcct tcgcgcgcga gccgaatgcg
       61 gtcgccgttg tcgacacctg ccggcacctt gaccgacagt gtcttggtct tacgaacacg
      121 accgcgcccg ttgcagtcgc ggcagggctt gtcgatcagc gtgccggcgc cggcgcagtt
      181 cgggcaggtc tgctggatcg agaaaaatcc ttgcgcgatc cggacctggc cggcgccacc
      241 acaggtcttg cattgcgtcg gttgcgagcc cggctcggct cccttgccgg tgcagcgcga
      301 acactcgacc tgcgtcggta tgtcgagcgt gatcgaatca cccgcgacgg cttgctccaa
      361 ggacagatcg agctcgtacc ggaggtccgc gccgcgaaat acttgattcc gtccgcggcc
      421 cctaccgccg aagatgtcgc cgaacacgtc gccgaaaatg tcgccgaacg catcggcgcc
      481 ggcaccgaat ccgccaccca tgccctggct gccttgcacg ccggcgtggc cgaagcggtc
      541 gtaagttgcg cgcttctcct tgtcacagag gacctcgtag gcttccttgg cctccttgaa
      601 gtgcccttcg gcctccgggt tgcccggatt gcggtcgggg tgatacttca tcgcgagacg
      661 gcgataagcc ttcttgatat cggcctcggt cgcttggcgc tcgacgccga gcacctcgta
      721 atagtcccgc ttcgccatcc tcgtcctcga tagcaggaga gcacgctcga gcgtgctctc
      781 ctaagtcacc agtcgtcgct caaacgcttg gtcagctgcg tttgggctta tcgtccttca
      841 cttcctcgaa ctccgcatcg acgacgttct cagtaccgcc gccggccgat tgctcgccgc
      901 ccggagcccc agccccctgc tgctgttggt tcgcatacag acgctgcgcc atgccggccg
      961 acgcttcgcc gagcgccttg agcttggtct cgatcacggc cttgttgtcg cccttgatcg
     1021 cttccttcgc atccgccagg gcagattcga tcttggcacg ctcctcgccc gcaaccttgt
     1081 cgccgagctc gcgcaacgac ttctcggtgg cgtggatcaa agcatcggct tgattacgcg
     1141 tctccgccag ctcgcggaac ttggcgtcct cggcggcgtg cgcctcggcg tcgccgacca
     1201 tgcgcttgat ctcgtcctcg ctcaagcccg aggacgcctt gatcacgatc ttctgctcct
     1261 tgcccgtcgc cttgtccttg gcggagacat tgaggatgcc gttcgcgtcg atgtcgaacg
     1321 tgacctcgac ctgcggcatg cctcgcggcg ccggcggcag atcggagagg tcgaagcgac
     1381 cgagcgactt gttgtcggca gcgcgcccgc gctcgccctg caacacgtgg atcgtcaccg
     1441 ccgtctgatt gtcctccgcc gtcgagaacg tctgattcgc cttggtcgga atcgtcgtgt
     1501 tcttctcgat cagcttcgtc atgacgccgc cgagcgtctc gatgccgagc gacagtggcg
     1561 tgacgtcgag caacaggacg tccttgacct caccggcaag cacgccggcc tgaatcgcgg
     1621 caccgacggc caccgcctcg tccgggttca cgtccttgcg cggctccttg ccgaacaacg
     1681 tctgcaccgt ttcctgcacc ttcggcatcc gggtctgtcc gccgacgaga atcacgtcgt
     1741 cgacctccgt gaccttgagg cccgcatcgc tgagcgccgt cttgcaaggg gcaatcgtct
     1801 tttcgatcaa gtcctctacg agcgactcga gcttcgcacg cgtcagattg atgttcaggt
     1861 gcttaggacc gctggcatcg gccgtgatat acggcaaatt gacctcggtc tgttgccgcg
     1921 acgacagctc gatcttcgcc ttctcggacg cttccttgag gcgctgcatc gcgagcggat
     1981 cgcggcgaat gtcgacgccg ctctccttct gaaattcctt cgcgaggtaa tcgatgatgc
     2041 gcttgtcgaa gtcctcaccg ccgagaaacg tgtcgccgtt ggtcgcgagc acctcgaact
     2101 ggtgctcgcc gtcgacctcg gcgatctcga tgatcgagat gtcgaacgtg ccgccgccaa
     2161 gatcgtagac ggcgatcttg cggtcaccgc gcttcttgtc gaggccgtag gcgagtgccg
     2221 ccgcagttgg ctcgttgatg atgcgcttga cctcgaggcc cgcgatcttg cccgcgtcct
     2281 tcgtggcctg gcgctgcgag tcgttgaagt acgccgggac cgtgatgacg gcctcggtga
     2341 ccttctcgcc gaggtagtct tccgccgtct gcttcatctt cgtgagcacg cgcgccgaga
     2401 tctcgggcgg tgccatcttc ttgccgttga cctcgaccca ggcgtcgccg ttgtcggcct
     2461 tcacgacttt gtacggcacc atgccgacgt ctttctggac aacgtcatct tggaaacgcc
     2521 gaccgatcaa gcgcttcacc gcgaacaggg tgttgctcgg gttcgtgact gcttggcgct
     2581 ttgcggtttg gcccacgaga acctcgccgt ccttcgtgaa cgcgatgatc gagggtgtcg
     2641 tacgatcgcc ctcgctgttc tcgatcactt tcggcttgcc gccgtccatg atcgcgacgc
     2701 acgagttcgt ggtgcctagg tcgatcccga tcactttgcc catgtgattg ctccaacaaa
     2761 acgtgaaaaa gcggattgaa ctgaatcagc gagatggggc gacggcccta caattcaagg
     2821 ggcttcccct cgagcgacga ggactttcgc ggcgcgcaac agccgttcat tgagctcgta
     2881 tcccttctgc acgacttcga tcaccgtatt cggcggcgca tcgaccgatg ccagcagccc
     2941 cagcgcctcg tgcttcgtcg ggtcgaaagg ctgaccctgc ggcgcgattt cccggatgcc
     3001 acacgcgttg aacgcctcct ccaagagccg caacgtggca cgctgtccat cgaggagcgc
     3061 gtcgtgcccg gccttctccg cggcggccag ccctgcctcc aagctgtctc gcaccggcaa
     3121 gatcgcctga gccaagcgct cggcgccaaa cttccgcgca gcatccacgt cgcgcgcact
     3181 gcgtttgcgc agattctcga gctctgcc
//
LOCUS       DATCUD010000617         2147 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98646, whole genome shotgun sequence.
ACCESSION   DATCUD010000617 DATCUD010000000
VERSION     DATCUD010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98646"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VIQ99_08985"
     CDS             <1..230
                     /locus_tag="VIQ99_08985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent dehydrogenase, methanol/ethanol
                     family"
                     /protein_id="HEY9183321.1"
                     /translation="DLRRSAALTSAALWKNIVIDGALEPNGMIGWSAFIDATDAENIR
                     AYVGAQARILRDAETASTDPAEPANPAAGAL"
     gene            355..969
                     /locus_tag="VIQ99_08990"
     CDS             355..969
                     /locus_tag="VIQ99_08990"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEY9183322.1"
                     /translation="MAPIRIPFALASGLLLALAGFFGLVQLIGAPLDVEKAVVVDRFN
                     FTRQIVDTPIIEERPNKPEREPPKMHPEVPRIGPGGGEHTVATFRPPLTRVVTPGRAR
                     GLPMGVDREAIPLVRIDPTYPRREQERGIEGWVLVQFTVTAIGTVRDAIVVESEPKSV
                     FDAAALEAIGRWRYNPRVDGGVAVDRVGLRTVIRFKLEGSESGV"
     gene            1024..1374
                     /locus_tag="VIQ99_08995"
     CDS             1024..1374
                     /locus_tag="VIQ99_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEY9183323.1"
                     /translation="MAQTNPPFMSGVPELLVLRMLSAREMYGYEIVKAMRLITGEAIG
                     FGEGVIYPVLHALEESGAVKARRKAVNGRERVYYSLTTKGKRRLEQLSGEWRRVSAGV
                     NSALTGATGEPQDA"
     gene            1367..1789
                     /locus_tag="VIQ99_09000"
     CDS             1367..1789
                     /locus_tag="VIQ99_09000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183324.1"
                     /translation="MPDTRFEQLRSELTRGGVAKVYVERTLLELGEHYADLESAALAA
                     GQSADEAARCARDALGDEHAIAAAILARRELLCFQARHPCVANCLHSAAAIGAIPGLP
                     LMYCIEHRPELARYGVALGLAVTLVGGMLATLDWLIFV"
     gene            complement(1804..>2147)
                     /locus_tag="VIQ99_09005"
     CDS             complement(1804..>2147)
                     /locus_tag="VIQ99_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183325.1"
                     /translation="EEYDTVRTIHMNPNAAAPAEHTLYGFSRGRFEGNTLVIETDHIK
                     AGYFDQEGTPMSDQIKVVERLTPNADYTRLDYTLTTTDPVNFERPFDLTRYFVWKPEN
                     TVHPYECLDRF"
BASE COUNT          358 a          682 c          718 g          389 t
ORIGIN      
        1 ccgacctgcg ccgctcggcc gcgctgacga gcgctgcgct atggaagaac atcgtcatcg
       61 acggcgcgct cgagccgaac ggcatgatcg gctggtcggc gttcatcgat gccacggatg
      121 ccgagaacat ccgcgcgtat gtcggcgcgc aggcgcgaat cctgcgcgac gccgaaacgg
      181 caagtacgga tcccgccgag cctgcgaacc ccgctgccgg cgcgctgtag agagccttcc
      241 gtccatggcc cggccgtcat acctaccgtt tctatgtttg acataccttt aacgggtagg
      301 tatggtcgaa tcgcgcgtcg agttggacgc gcgcttgcct agaggagatt cgtcatggct
      361 ccgattcgca ttccattcgc gctcgcgtcc ggtctcttgc tcgccctcgc gggattcttc
      421 gggctcgtgc aattgatcgg tgcgccgctc gacgtcgaga aggccgtcgt cgtcgaccgt
      481 ttcaacttca ctcgccagat cgtcgacacg ccgatcatcg aggagcgtcc caacaagccc
      541 gagcgtgagc ctcccaaaat gcatccggaa gttcctcgca ttggcccggg gggcggtgag
      601 cacactgtcg ccacattccg gccaccgctc acgagggtcg tgacgccggg ccgcgcccgc
      661 ggacttccga tgggtgtcga tcgcgaggcg attccgctcg tccgcatcga cccgacctat
      721 ccgcgacgtg agcaagagcg cggcatcgag ggctgggtac tcgtgcaatt cacggtgacg
      781 gccatcggaa ccgtgcgcga cgcgatcgtg gtcgagtccg agccgaagtc cgtgttcgac
      841 gccgcggcac tcgaggccat cggccgatgg cggtacaacc cgcgcgtcga cggcggcgtc
      901 gcagtcgacc gcgtgggctt gcggaccgtg attcgcttca agctcgaagg ctcagaaagc
      961 ggagtttaat caatcacttt cgatcgcact gacgagtact caacttagga ctatcgtcga
     1021 cccatggcac aaacgaaccc cccgttcatg agcggcgtcc cggagttgtt ggtgctccgc
     1081 atgttgagcg cccgcgagat gtacggctac gagatcgtca aggccatgcg cttgatcacc
     1141 ggcgaggcca tcggctttgg cgagggagtc atctatccgg tgctgcatgc gctcgaagag
     1201 agcggcgccg tcaaggcgcg gcgcaaagcg gtcaacggcc gcgagcgcgt ctattactcg
     1261 ctgacgacca aaggcaaacg ccggctcgag cagttgagcg gcgagtggcg gcgcgtcagc
     1321 gccggcgtga actcggcgct gacgggtgcc acgggggaac cgcaagatgc ctgacacacg
     1381 gttcgagcag ctgcgatccg agctcacgcg cggcggagtg gcgaaggtct acgtggagcg
     1441 cacactgctc gagctcggcg agcactacgc ggatctcgaa agcgcggcgc tggcggcggg
     1501 ccaaagcgcg gacgaagccg cgcggtgcgc gcgcgatgcg ctcggcgacg agcacgcgat
     1561 tgcagcggcg atcctggcgc gccgcgagct gctgtgcttt caggcacgtc atccgtgcgt
     1621 cgcgaattgc ctgcactcgg cagccgcgat cggggcgatt cccggcctac cgctgatgta
     1681 ttgcatcgag catcggcccg agctcgcgcg ctatggagtc gcgctcgggc tcgccgtcac
     1741 gctcgtcggc ggaatgctgg cgacgctcga ctggctgatc ttcgtctgag agcctcgggt
     1801 cgttcagaac cggtcgaggc actcgtacgg gtgcaccgtg ttctcgggct tccacacgaa
     1861 gtagcgcgtg aggtcgaacg gccgctcgaa gttcacgggg tccgtcgtcg tcagcgtgta
     1921 gtcgagccgc gtgtaatcgg cgttcggcgt cagacgttcg acgaccttga tctgatcgct
     1981 catcggcgtg ccttcttgat cgaagtaacc ggccttgatg tggtcggtct cgatcacgag
     2041 cgtgttgccc tcgaagcggc cgcgcgagaa accgtacagc gtgtgctcgg ccggtgccgc
     2101 ggcgttcggg ttcatgtgga tcgtgcggac ggtgtcgtac tcctcga
//
LOCUS       DATCUD010000618         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55895, whole genome shotgun sequence.
ACCESSION   DATCUD010000618 DATCUD010000000
VERSION     DATCUD010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55895"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..980
                     /locus_tag="VIQ99_09010"
     CDS             <1..980
                     /locus_tag="VIQ99_09010"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9183326.1"
                     /translation="ATLMPTRGDAAGDIYWFSLLTEDAAAASKFYADLFGWEITDSPT
                     GALMALRDGQPIAGISQIEDRIPNASESLWLAAITVDDLPKAVATAKGLGATVHQDVT
                     NLPGWGSFALIQDPQGAPVTLALPERRLGGRQGYSGWRWAELWTHEPEKAAEFYTKVI
                     GYTLEQMPMGDSTYTVFGFPGERNAGLVALENPEVASRWAPYVGVTDLRGILVRVWQL
                     GGQVLREPSEIDFEAAGANRVALILDPTGAAMFLYQLDAQATADPNIAAQNTSRSSPP
                     RSSSSSDDRSGPNVDVHVSVSYGYGYGFGPSWGPAYYPAWGYRPFGRPY"
     gene            complement(1000..>1645)
                     /gene="folP"
                     /locus_tag="VIQ99_09015"
     CDS             complement(1000..>1645)
                     /gene="folP"
                     /locus_tag="VIQ99_09015"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY9183327.1"
                     /translation="PLTADEEWARLEPALGRNIDRYRGKALRPRFSVDTYHADTARRA
                     LALGADLINDVSGLTSRAMIELAAATTAELVAMHNLGVPADKTRTLPEGDNPTEAVER
                     WLEQRLIEWQRAGLDMNRIVFDPGIGFGKNALQSLRLLRDIERFQRFGLRVLVGHSRK
                     SFMHTIAAERADRDLFTVGASLALCAAGVDLLRVHDVGAHTAAYRGFAHVRPQA"
BASE COUNT          257 a          550 c          583 g          255 t
ORIGIN      
        1 ccgcgacgct catgccgacg cgcggcgatg cggccggcga catctattgg ttcagcctgt
       61 tgaccgagga cgcggcggcg gcgagcaagt tctacgcaga cctgttcggc tgggagatca
      121 cggacagccc gaccggcgct ctaatggcgc tccgcgacgg ccagccgatc gcgggcatca
      181 gccaaatcga ggatcgaatc ccgaacgcgt ccgagtcgct gtggctcgcc gcgatcaccg
      241 tcgacgacct gccgaaggcc gtggccacgg cgaaagggct cggcgcgacg gttcatcagg
      301 acgtcacgaa cctgccggga tggggcagct tcgcgctgat ccaggacccg cagggcgctc
      361 ccgtcacgct tgccctgccg gagcgccggc tcggcggccg gcagggatac agcggctggc
      421 ggtgggccga gctctggacg cacgagcccg agaaggccgc ggagttctac acgaaggtga
      481 tcggctatac gctcgagcaa atgccgatgg gcgacagtac ctacacggtg ttcgggttcc
      541 ccggcgagcg gaacgcgggc ttggtcgcgc tcgagaatcc ggaggtcgcg tcgcgctggg
      601 ctccgtacgt cggggtcacg gacctgcgcg gcattctcgt gcgcgtgtgg cagctcggcg
      661 gccaggtgct gcgcgagccg tcggagatcg atttcgaggc ggccggcgcg aaccgcgtcg
      721 cactgatcct ggatccgacc ggcgcggcga tgttcctgta ccagctcgac gcgcaggcca
      781 cggccgaccc gaacatcgct gcgcagaaca cgtcgaggtc gagccctccg cgcagcagct
      841 cgagtagcga cgaccgatcc ggcccgaacg tcgatgtgca cgtgagcgtc tcgtacggct
      901 acggctacgg tttcggaccg agttggggtc cggcttacta cccggcctgg ggatatcggc
      961 cgttcggccg gccgtactga gcgcctgacc ggcgcgcgat cacgcctgcg gtcgcacgtg
     1021 cgcgaacccg cgataggccg ctgtgtgcgc gcccacgtcg tgcacgcgca gcaggtcgac
     1081 gcccgcggcg cagagagcca gcgatgcgcc gaccgtgaac agatcgcgat ccgcgcgctc
     1141 ggctgcaatc gtgtgcatga acgacttgcg cgaatggccg acgagcacgc gtagcccgaa
     1201 ccgttggaag cgttcgatgt cgcgcagcag gcgcagcgac tgcaacgcgt tcttgccgaa
     1261 gccgatgccg ggatcgaaga cgatgcggtt catgtcgagg cctgcgcgct gccactcgat
     1321 gagccgttgc tcgagccagc gctccacggc ttcggtcggg ttgtctccct cgggcaacgt
     1381 ccgggtcttg tcggccggca caccgagatt gtgcatcgcg acgagctcgg ccgtggtcgc
     1441 tgccgcgagc tcgatcatcg cgcggctcgt gagcccgctg acgtcattga tcaaatccgc
     1501 gccgagcgcg agcgcgcggc gtgcggtgtc ggcgtgatac gtgtcgacgc tgaaccgagg
     1561 cctcaaggct ttgccccgat aacggtcgat gttgcggccg agcgcgggct cgaggcgcgc
     1621 ccattcctcg tccgccgtca gcggc
//
LOCUS       DATCUD010000619         1712 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20300, whole genome shotgun sequence.
ACCESSION   DATCUD010000619 DATCUD010000000
VERSION     DATCUD010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20300"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VIQ99_09020"
     CDS             complement(<1..828)
                     /locus_tag="VIQ99_09020"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY9183328.1"
                     /translation="MSASTHHHRPVLGVLLKLSSVALLSGLAACVKYLGDGVPTGQLI
                     FVRGVISAAVLGLIAWRTEGLQILRTDRLRSHAVRSLSGTASMFCWFTALTLIPLADF
                     TVISFTAPMFLTVLAMVILGERIHAYRWTALGVGLVGVLIMVGPHLTLGGSSVGVLVA
                     FGAAVFSALAMVALRGMSGSSGEHPLAITFYFALTTVACSAVTVFGGWPMPTGEQWGL
                     IVVAALLGAFGQLLMTMSYRYSEASTLAPLDYTNLLFAVALGYYVFAEVPHWTIWVGA
                     "
     gene            complement(931..1326)
                     /locus_tag="VIQ99_09025"
     CDS             complement(931..1326)
                     /locus_tag="VIQ99_09025"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9183329.1"
                     /translation="MATQEVAPREKRELTENTERTEAGKFFSPYTDIHETERAVVVSM
                     EMPGVDKDSIDIRLDKGVLTVKGTIDSTKYDALKPIYTEYNVGNFVRTFTVSTKIDAG
                     RISATVVDGVLTIELPKAAEAVAKRIAVS"
     gene            complement(1349..>1712)
                     /locus_tag="VIQ99_09030"
     CDS             complement(1349..>1712)
                     /locus_tag="VIQ99_09030"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9183330.1"
                     /translation="AMGSDWFGSRLSGSGAFPLVNVFSDGEDFVLVAELPGVKKEDLD
                     IQVRGDTVRIQGKKTIADDESASVHRRERSAGQFDRTLTLPTDLDAAKVSAQYRDGVL
                     TLRLPRAESAKPRTVAIN"
BASE COUNT          324 a          575 c          526 g          287 t
ORIGIN      
        1 cgcgccgacc cagatggtcc agtgcggcac ctcggcgaac acgtagtagc ccaacgcgac
       61 cgcgaacaac aggttcgtgt aatcgagggg ggccagcgtc gacgcctcgg agtagcggta
      121 cgacatcgtc atcagcaact gtccgaatgc gccgagcagc gccgcgacga cgatcaaccc
      181 ccattgctct cccgtcggca tcggccagcc gccgaacacc gtgaccgccg agcacgcgac
      241 cgtcgtcagc gcgaaataga acgtgatcgc gagcggatgc tcgccgctgc tgccgctcat
      301 gccgcgcagg gcgaccatcg cgagcgcaga gaacacggcc gcaccgaacg cgacgagcac
      361 gccgaccgag ctgccgccca acgtcaggtg cgggccgacc atgatcagca cgccgacgag
      421 gccgacgccg agcgccgtcc agcgataggc atgaatgcgc tcgccgagta tcaccatcgc
      481 gagaaccgtg aggaacatcg gcgccgtgaa gctgatcacc gtgaagtcgg ccaacgggat
      541 cagggtcagc gcggtgaacc agcagaacat gctcgccgtg ccggacaagg accggaccgc
      601 gtgcgagcga agccggtccg tgcgcaggat ctgcagaccc tcggttcgcc acgcgatcaa
      661 cccgagcacg gccgcggaga tcacgccgcg cacgaagatc agctgcccgg tcggtacgcc
      721 gtcgcccaaa tacttgacgc acgcggcgag cccggacagc agcgcgacgg acgacagctt
      781 cagcaatacg ccgagaaccg gtctgtggtg gtgtgtgctc gcggacaacg aaatgccaat
      841 ggcatgcgcg gggcgctcac cataccaggc gctgcggtcg tttgcaggag gcttctcggc
      901 gcacgccgag aagcctcgca ccgtttcgac ttagctgacg gcgattcgct tcgcgaccgc
      961 ctcggcggcc ttcggcagct cgatcgtcag cacgccgtcg acgacggtgg ccgagatccg
     1021 gccggcgtcg atcttcgtcg acacagtgaa cgtgcggacg aagttgccga cgttgtactc
     1081 cgtatagatc ggcttcaacg catcgtactt cgtggaatcg atcgttccct tgaccgtgag
     1141 gactcccttg tcgaggcgaa tgtcgatcga atccttgtcg acacccggca tttccatcga
     1201 gacgacgact gcacgctcgg tctcgtgaat gtccgtgtac ggactgaaga acttgcccgc
     1261 ctccgtgcgc tcggtgttct ccgtcaactc gcgcttttcg cgcggagcca cttcttgcgt
     1321 agccatgttc atttacctcg taatgaatct agttgatcgc gaccgtccgc ggctttgcgc
     1381 tttcggcccg cggcagacgc aaggtcaaaa cgccgtcgcg gtattgcgcc gacaccttgg
     1441 ccgcgtcgag gtccgttggc agggtcagcg tgcggtcgaa ctgtcccgcg gaacgctcgc
     1501 gtcgatgcac gcttgcgctc tcatcgtcgg caatcgtctt cttgccctgg atccgaaccg
     1561 tgtcgccgcg cacctggatg tcgaggtctt ctttcttcac gcccggtaat tcggcgacca
     1621 gcacgaagtc ttcgccgtcg ctgaacacgt tgacgagcgg aaatgctccg gaccccgaga
     1681 gccggctgcc gaaccaatca ctgcccatag cg
//
LOCUS       DATCUD010000620         2414 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98651, whole genome shotgun sequence.
ACCESSION   DATCUD010000620 DATCUD010000000
VERSION     DATCUD010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98651"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1172
                     /locus_tag="VIQ99_09035"
     CDS             <1..1172
                     /locus_tag="VIQ99_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183331.1"
                     /translation="TRLAEFGGFVNGGDSEGFGASDVFYKCAPSEEIAIEHGRVPSFM
                     PGTNDSIDMFAKRHGVPLAAALGGSATLYPEFAQSLRPGGSLAAEPPAAAPSRRAAER
                     AVPTPAATPAVSSMHVAGQVWLVGVGDRNVAVQVGDEGVLVVNPGPEELADAVLAEIH
                     EIAPDKRVRVIVMTDDAVAHIGGTAKLAVGPTPRAQRAAVIAHENASLRIATSGLSDQ
                     HAPTDTFFRGTRELFFNDEPIEIMHVPDATSDGDVLVFFRKSDVIVAGGVIDDLTYPV
                     IRMDDGGTVNGTLTALNRILDLTVAEYRAQGGTMVIPNRGRIYDEGDVAEYRDMLTIV
                     RDRVQDAIAKGFTLEQVKAARLARDYDGRYGAEGGPASAEEFITMVYRSLIAASN"
     gene            1187..1669
                     /locus_tag="VIQ99_09040"
     CDS             1187..1669
                     /locus_tag="VIQ99_09040"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183332.1"
                     /translation="MWHEGGQPVRGRCWIAAAFAAVIATGAWPGDAMAHHSFAMYDQS
                     QVKTLTGKLTRFIPGANHAQMIFELLEADGTAVVDEAGKPVLWGVETGPAARIARQGV
                     TPDNFPAGTIVTVTLNPLRNGKPFGAMPNGTPIVHCGTTMPQGGCTPDTGRVYLGQNE
                     "
     gene            1681..>2414
                     /locus_tag="VIQ99_09045"
     CDS             1681..>2414
                     /locus_tag="VIQ99_09045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183333.1"
                     /translation="MRRPGIVLAALWLTGAASAQRYTGPEPPPGIEPLPVDLFTTKNF
                     YFDREHWTDPRYARCNTPAQLTNMWVAQRVGHWGDCSFGVSTEEVVSPYPYKTAKEHY
                     EALKAEAERDGGVTTHTRESLPDWDGWYFRGTFQRPPEGQWTNGNTLQTAAMLSLLTP
                     EYQQRMTQMNYHEAVNNAPQWMASFCYPEGLMRWWYVWGIRDMEVLVTPKQVQFLAGV
                     ADNFIRKVLIGQNHAQLIPQWYGETVG"
BASE COUNT          434 a          779 c          832 g          369 t
ORIGIN      
        1 acacgcggct cgcggagttc ggcggtttcg tgaacggcgg cgacagcgag ggtttcggcg
       61 ccagcgacgt gttctacaag tgcgcgccga gcgaagagat cgcgatcgag cacggcaggg
      121 tgccatcgtt catgccgggc accaacgaca gtatcgacat gttcgcgaag cggcacggtg
      181 tgccgctcgc ggcggcgctc ggcggcagcg cgacgctgta ccccgagttc gcgcagagct
      241 tgcgtccggg cggctccctc gcagccgagc cgccggccgc cgcgccctcg cggcgagcgg
      301 cggaacgggc cgtgcccacg ccggccgcca cgccggcggt gagctcgatg cacgttgcgg
      361 gacaggtttg gctggttggg gtcggtgatc gcaatgtcgc cgttcaggtg ggtgacgaag
      421 gcgtgctcgt cgtgaacccg gggcccgagg agctcgccga cgccgtgctc gcggagatcc
      481 acgagatcgc gcccgacaag agagttcgcg tgatcgtgat gaccgacgat gccgtggcgc
      541 atatcggcgg cacggcgaag ctcgccgtgg gcccgacgcc acgagcgcag cgcgcggccg
      601 tcatcgcgca cgagaacgca tcgctgcgga tcgcgacctc ggggttgtcg gatcagcacg
      661 cgccgaccga cacgttcttc cgcggcacgc gcgagctctt tttcaacgat gaaccgatcg
      721 agatcatgca cgtgccggac gctacgagcg acggcgacgt gctcgtgttc tttcgcaagt
      781 cggacgtcat cgtcgccggc ggcgtgatcg acgacctgac gtatcccgtg attcgcatgg
      841 acgacggcgg caccgtgaac ggcacgctca cggcgctgaa ccgaattctg gatctcacgg
      901 tggcagagta tcgagcgcag ggcggcacga tggtcattcc gaaccgcggc cggatctacg
      961 acgagggcga cgtcgccgag tatcgcgaca tgctgacgat cgttcgcgat cgagtgcagg
     1021 acgcgatcgc caaagggttc acgctggaac aagtcaaagc cgcacggctc gcgcgcgact
     1081 acgacggccg gtacggcgcc gagggcggcc cggcttcggc cgaagaattc attacaatgg
     1141 tgtatcgaag cctgatcgct gcctcaaact agcgccgaac ggtctcgtgt ggcacgaggg
     1201 gggacaacca gtgcgaggac gatgttggat tgccgcggcg ttcgcggccg tgatcgcgac
     1261 gggtgcgtgg ccgggcgacg ccatggccca tcactcattt gcgatgtacg accagagcca
     1321 agtcaagacg ctgacgggga agttgactcg gttcattccc ggcgccaatc acgctcagat
     1381 gatcttcgag ctgctcgagg cggatggcac cgccgtcgtc gacgaggccg gcaagccggt
     1441 gctgtggggc gtggagacag gtccggctgc acgcattgcc cggcaaggcg tgacgcccga
     1501 caacttcccg gccggcacga tcgtgaccgt gacgctgaat ccgctgcgta acggcaagcc
     1561 gttcggcgcg atgccgaacg gcacgccgat cgtgcactgc ggcacgacga tgccgcaggg
     1621 cggctgcacg cccgacaccg gccgcgtcta tctcgggcag aacgagtgaa cggaggagtc
     1681 atgcgacgcc cgggcatcgt tctcgccgcg ctctggctca cgggcgcggc gagcgcccaa
     1741 cgctacaccg ggcccgagcc gccccccggc atcgagccgc taccggtcga tctcttcacg
     1801 accaagaact tctacttcga ccgcgagcac tggaccgatc cgcgttatgc gcgctgcaac
     1861 acacccgcgc agctcacgaa catgtgggtc gcgcagcgcg tcggccactg gggcgattgc
     1921 agcttcggtg tcagcaccga ggaagtcgtg agcccctatc cgtacaagac ggccaaggag
     1981 cactacgagg cgctcaaggc ggaggccgag cgcgatggcg gcgtcacgac gcacacgcgc
     2041 gagtcgctgc ccgactggga cggctggtat tttcgcggca cgttccagcg gccgccggaa
     2101 ggccaatgga cgaacggcaa cacgctgcaa acggccgcga tgctgtcgct gctgacgccc
     2161 gaataccagc agcgcatgac gcagatgaac taccacgagg ccgtcaacaa cgcgccgcag
     2221 tggatggcct cgttctgcta tcccgagggg ctcatgcgct ggtggtacgt ctggggcatt
     2281 agggacatgg aagtcctcgt gacgccgaag caggtgcagt tcctcgccgg cgttgccgac
     2341 aacttcatcc gcaaagtctt gatcggtcag aatcacgcgc agctgattcc gcagtggtac
     2401 ggcgagaccg tcgg
//
LOCUS       DATCUD010000621         1746 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_27378, whole genome shotgun sequence.
ACCESSION   DATCUD010000621 DATCUD010000000
VERSION     DATCUD010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27378"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..721)
                     /locus_tag="VIQ99_09050"
     CDS             complement(<1..721)
                     /locus_tag="VIQ99_09050"
                     /inference="COORDINATES: protein motif:HMM:NF012958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase-fold protein"
                     /protein_id="HEY9183334.1"
                     /translation="MSNASSKALIRATLFVATATAFAQAPVTPPAPPPVVSPEISATR
                     DVTLRVRAPQADKVALISGGDMAAIPFGGGLPLSKGADGVWQVMIPNVPAGAYRYRFD
                     IDGVATGDPGNPLTSQSNGNSWSLFYVPGAPFMDAQRVAHGAVAEVTYYSTALGRDRR
                     MHVYTPPGYERNRDSYPVFYLLHGAFDGDDSWSTVGRAGFILDNLIAASKAVPMIVVM
                     PDGNVAPFSFTYSVPEDVFPEE"
     gene            893..1645
                     /locus_tag="VIQ99_09055"
     CDS             893..1645
                     /locus_tag="VIQ99_09055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183335.1"
                     /translation="MFKLFSNCARAVTALALIALANVAIAQDTTRILVQVSHLKPERV
                     AEWRALQQNEVVPALKKAGVTQRTVLETLFGDRSEYVSLRPLPSFAEFDGDGVLAAAL
                     GERAAATLAAKLAACTVSTQRYIINRQNEFNVGAASGPIFVTTRYRLNPGAGPTYRQF
                     LRDYGNPLNTRGVQEGKILGASVSIAGNGAPEPGLWIQTTYLPNAAALDAGGLAGQLL
                     EQGQVQLLNQRAAQLRTNHSSIVRRVIPELSY"
BASE COUNT          314 a          567 c          594 g          271 t
ORIGIN      
        1 actcctccgg gaacacgtcc tccggcacgg agtaggtaaa gctgaacggt gccacgttgc
       61 cgtccggcat cacgacgatc atcggcacgg ctttgctcgc ggcgatcaag ttgtcgagga
      121 tgaagccggc gcggccgacc gtcgaccagg aatcgtcgcc gtcgaacgcg ccgtgcaaca
      181 ggtagaacac ggggtagcta tcgcggttgc gctcgtagcc gggaggcgtg tagacgtgca
      241 tgcgacgatc gcggccgagc gcggtcgagt agtaggtgac ctcggcgacg gcgccgtggg
      301 cgacgcgctg cgcgtccatg aacggggcgc ccggcacgta gaacaagctc caggaattgc
      361 cgttcgactg gctcgtgagc gggttgccgg gatcgccggt cgcgacgccg tcgatatcga
      421 atcggtagcg ataggcgccg gccgggacgt tcgggatcat gacctgccac acgccgtccg
      481 cgcccttgct gagcggcaat ccgccgccga acgggatcgc ggccatgtcg ccgccgctga
      541 tcagcgcgac cttgtccgcc tgcggcgcgc gcacgcgcag cgtcacgtcg cgagtcgccg
      601 agatctcggg cgacacgacc ggcggcggag caggcggcgt gaccggcgcc tgagcgaacg
      661 cagtagccgt ggccacgaat aacgtggccc ggatcaaggc cttgctcgac gcattggaca
      721 tgggtgcacc ccctcgcgag cttgctgcgt cggtcacggt atcacaagga acggtgttca
      781 gacccggtcc acgcggagcg ccgattgcaa tcgactgacc cgaagcctat cgtcgggccg
      841 cccgtagaac gagatcgagc cgacaacaac gaagaaccag aaggggagat ccatgttcaa
      901 gctattttcc aactgtgctc gcgccgtaac ggcgctcgcg ctgatcgcgc tcgccaatgt
      961 tgcgattgcg caagacacga cacgcatcct cgtgcaagtg tcgcacttga aacccgaacg
     1021 cgtcgcagag tggcgcgcgt tgcagcagaa cgaggtcgtg ccggcgctca agaaggccgg
     1081 tgtcacgcaa cggacggtgc tcgagacctt gttcggcgat cgctcggagt acgtgagcct
     1141 tcggccgtta ccgagcttcg cggagttcga cggcgacggc gtgctcgcgg cggcgctcgg
     1201 tgagcgcgct gcggctactc tcgcggcgaa gctggccgca tgcacggtct cgacgcagcg
     1261 ctacatcatc aaccgacaga acgagttcaa tgtcggcgcg gcgagcgggc cgatcttcgt
     1321 gacgactcgt tatcgcctca atcccggcgc gggtcccacg taccgacagt ttctgcgcga
     1381 ctacggcaac ccgttgaaca cccggggcgt gcaggaaggc aagatcctcg gcgccagcgt
     1441 gtcgatcgcc ggcaacggcg ctcccgagcc cggtctctgg atccagacga cgtacctgcc
     1501 gaatgccgcc gcgctcgacg ccggtggtct agcggggcag ctgttggagc agggacaggt
     1561 tcaactcctg aaccagcgtg ctgcgcagct gcgaacgaac cacagcagca tcgtcaggcg
     1621 cgtgattccg gagctcagct actgatcggc agcgggccgg ggggctgggc atcacccagc
     1681 tccgcggtac cgcgcacggt gcgttgtcct cagagcacca tgaggtcctg gccgaccacg
     1741 gcgcgg
//
LOCUS       DATCUD010000622         1612 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48720, whole genome shotgun sequence.
ACCESSION   DATCUD010000622 DATCUD010000000
VERSION     DATCUD010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48720"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VIQ99_09060"
     CDS             complement(<1..660)
                     /locus_tag="VIQ99_09060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183336.1"
                     /translation="MSQRILLSLSIAASLALVGCGATEDAAQTAAATFTYPDGSPHPV
                     TPWGEPDLQGNWPIMHLFATRLQRDPKYGERRELTDEEWQAAQTGLERRDARYQEEIQ
                     SNKMGMGHWAETTMRTEATRLTSLISYPPDGQLPALTARGQELAPLFRSDDTQQVFDS
                     VNDFDAWDRCITRGLPASMLPFNYNNGIRIHQAPGYVVIDLEMIHEARVVPIGVPPLD
                     PA"
     gene            complement(671..>1612)
                     /locus_tag="VIQ99_09065"
     CDS             complement(671..>1612)
                     /locus_tag="VIQ99_09065"
                     /inference="COORDINATES: protein motif:HMM:NF024240.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9183337.1"
                     /translation="AFATGVAMTDETRIEAVFVETKSGRFAIRGQVFVDGSGDGDLAA
                     WAGVPYEVGDGAGNMLYPSTMFRINAVDPVKAGRAWEVLPGLMEEAEKQGRRFPRKKP
                     IVRPQRNPIEWRANLTQIKNPSGTAVNGIDMKELSYGEVEGRRQCWDVFSFIKEHLPG
                     FESSYIVEIAPQIGIRETRRILGEYVLTEQDILGCRDFPDTIGVQGWPVEAHVKGDVK
                     FVFAPPLSRGFNEIPYRIIVPKKVDNLFVAGRCASMSHDGQSSARVSGPCLVMGQAAG
                     TAADLVLATKVTPRALDVPTLQRKLRGAGVSLGPSAD"
BASE COUNT          255 a          547 c          514 g          296 t
ORIGIN      
        1 tgcaggatcg agcggcggca cgccgatggg aacgacacgc gcctcgtgga tcatctcgag
       61 gtcgatgacc acgtaacccg gcgcttggtg tatgcgaatg ccgttgttgt agttgaacgg
      121 cagcatcgac gcgggcaggc cgcgcgtgat gcagcggtcc catgcatcga agtcgttcac
      181 ggagtcgaac acttgctgcg tgtcgtcgct gcgaaacagc ggcgcgagct cttggccacg
      241 cgccgtgagc gcgggcaatt gtccgtccgg cggatacgag atcagcgacg tgaggcgcgt
      301 cgcctccgtg cgcatggtcg tctcggccca gtggcccatg cccatcttgt tgctctgaat
      361 ctcctcttga tagcgcgcgt cgcgacgctc cagacccgtc tgcgccgcct gccactcctc
      421 gtcggtcagc tcgcggcgct caccgtattt cggatcgcgc tgcagccgcg tcgcgaacaa
      481 atgcatgatc ggccaattgc cttgaaggtc cggttcgccc cacggcgtga ccgggtgcgg
      541 cgagccgtcg ggatacgtga acgtcgcggc ggccgtctgc gcagcgtctt cggtagcgcc
      601 gcaaccgacg agcgcgaggc tcgcagcgat cgacaacgac agcagaattc gctggctcat
      661 ggcttcctcc tcaatcggcc gacggtccca agctcacgcc ggctccgcgc agcttgcgct
      721 gcagcgtcgg cacgtcgagg gcgcgcggcg tgactttcgt cgcgagcacg agatcggcgg
      781 cggtgcccgc ggcctggccc atcacgaggc agggccccga cacgcgtgcc gacgactggc
      841 cgtcgtgcga catcgaggcg cagcgccccg cgacgaacag gttgtcgacc ttcttcggca
      901 cgatgatccg atacggaatc tcgttgaacc cgcgagacaa cggcggcgcg aacacgaact
      961 tcacgtcgcc tttgacgtgg gcctccaccg gccagccctg cacgccgatc gtgtcgggaa
     1021 aatcgcgaca tcccaggatg tcttgttccg tcaacacgta ctcgccgagt attcggcgcg
     1081 tctcgcggat gccgatctgc ggcgcgatct cgacgatgta agagctctcg aagcccggca
     1141 ggtgctcctt gatgaacgag aacacgtccc agcactgccg gcgtccctcg acttcgccgt
     1201 agctcagctc tttcatgtcg atgccgttga ctgcggtgcc gctcgggttc ttgatctgcg
     1261 tgaggtttgc gcgccactcg atcgggttac gttgcggccg gacgatcggc ttcttgcgtg
     1321 gaaaacgccg gccctgcttt tcggcttctt ccatgagccc cggcaggacc tcccatgcgc
     1381 gcccggcttt gaccgggtcg acggcgttga tcctgaacat cgtcgacgga tacagcatgt
     1441 tgccggcgcc gtcgccgacc tcgtacggca caccggccca ggccgcgagg tcgccgtctc
     1501 cggagccgtc gacgaacact tggccgcgaa tcgcgaaccg gcccgatttc gtctccacga
     1561 acacggcctc gatccgggtt tcgtcggtca tcgcgacgcc ggtcgcgaac gc
//
LOCUS       DATCUD010000623         1933 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20324, whole genome shotgun sequence.
ACCESSION   DATCUD010000623 DATCUD010000000
VERSION     DATCUD010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20324"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            325..1122
                     /locus_tag="VIQ99_09070"
     CDS             325..1122
                     /locus_tag="VIQ99_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011683116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEY9183338.1"
                     /translation="MALVSAIAFGTTAVAQREFRVYPSFEGDVAEAPLPPDWEVPGEL
                     VVGHLMFPDGRFGFGDQWRYGGTGWTDDYPKGDRALVQMLRRFTSTDVRAVEQPVNLE
                     DGDDAFYWPFLVAGLAGSMDLTEQQAAQLREHLLRGGFLFCDSFFGEGNYAVFVDSMR
                     RVFPDRPIIDLTADHPIFHAFYDLPEMIEVAIPNANEVFWGGRMGRGPPRWQGIEDDE
                     GRLMVLIAYNNDVQDAWQWADDPRYPHELINLALRLGVNVAMYAMTH"
     gene            1199..>1933
                     /locus_tag="VIQ99_09075"
     CDS             1199..>1933
                     /locus_tag="VIQ99_09075"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY9183339.1"
                     /translation="MQSARDQQIRALVRAAQARPAAERASFIAELAGGDEELRRSVEA
                     LLEREEATAVGAVAAAAQGETAELPPGTLLGHYRIDAVLGRGGMGVVYRATDTKLARP
                     VAIKLVSAGLADPAATRRFRTEAQTASSLNHPHIVTVHDVGEHAGAQYIVSELVDGGT
                     LEDWAAATRRRTWRQSVELLIGVADAIAAAHAAQVLHRDIKPSNILIGANGYAKLADF
                     GLAKLVEPKDAALSRVGGVTRPGVIVG"
BASE COUNT          313 a          652 c          647 g          321 t
ORIGIN      
        1 ttgcggaggc ccagtataaa cgcagcctcg agaggcgacg ggcgcgccta cccgatcagc
       61 cataccgcca gcgcgagcca aaacgccacg ccgtacccga ggattccgag ccagacgagc
      121 aagaggggcc aacccgccag acgcttcttg tccatcacgt gacctcatat cgctccacct
      181 cgtggcagcg gtgcgcgaca gcctgccatc cgtggcatac ccgagccttg tctcaaggcc
      241 gcattccttt gtccttacgt ggcgagcact gccactcgcc tgtatggtgt gcacgtggcg
      301 atcgtgcttc gcagcgtacc tgcagtggct ctggtgagcg cgatcgcctt tgggacaacc
      361 gcggttgccc agcgcgagtt ccgcgtctac ccgagcttcg aaggtgacgt cgccgaagcg
      421 ccactgcccc ctgattggga ggttccgggc gagctcgtgg tcggccactt gatgttcccc
      481 gatggccgct tcgggttcgg ggaccagtgg cgatacggcg gcacgggctg gaccgacgat
      541 tatccgaagg gcgaccgcgc gctcgtgcag atgctgcggc gcttcacgag caccgacgtg
      601 cgggccgtcg agcagcccgt gaacctcgag gacggcgacg acgctttcta ctggccgttc
      661 ctcgttgccg ggctcgccgg ctccatggac ctcaccgagc agcaggccgc gcagcttcgc
      721 gagcatctgt tgcgcggcgg ttttctgttc tgcgacagtt ttttcggcga gggcaactac
      781 gccgtgttcg tagacagcat gaggcgcgtg tttccggacc ggccgatcat cgatctcacg
      841 gccgatcatc cgatctttca cgcgttctac gacctgcccg agatgatcga ggtcgcgatc
      901 ccgaacgcga acgaggtctt ctggggcggc cgcatggggc gtggcccgcc gcgctggcaa
      961 ggcatcgaag acgacgaggg ccggctcatg gtcttgatcg cgtacaacaa cgacgtccag
     1021 gacgcctggc agtgggccga cgatccgcgc tatccgcacg agctgatcaa tctcgcgctg
     1081 cgtctcggcg tcaacgtcgc gatgtatgcg atgacccact gatctttgca gcggagcgcg
     1141 gcgttcggcg cctttgcctc tgctagagta tgcgcgttgc cgatggagct tgtcgcgctt
     1201 gcagtccgcg cgtgaccaac agattcgggc actggtgcgg gccgcgcagg cgcggccggc
     1261 ggccgagcgt gcttcgttca tagccgagct cgccggcggc gacgaggaac tacgccgcag
     1321 cgtagaggcg ctgctcgagc gcgaggaagc gacggccgtc ggtgccgtgg ccgccgccgc
     1381 gcaaggcgag acggcggagc tcccacccgg taccctgctt ggccactaca gaatcgacgc
     1441 ggtattaggg cgcggcggca tgggggtcgt gtaccgcgcc accgacacga agctcgcgcg
     1501 accggtcgcg atcaagctcg tctcggccgg tctcgccgat ccggcagcca cccgccgctt
     1561 tcgcaccgaa gcacagacgg cgtcgagcct gaaccatccg cacatcgtca ccgtgcacga
     1621 cgtcggcgag cacgccggcg cgcagtacat cgtcagcgag ctcgtcgacg gcggcacgct
     1681 cgaggactgg gccgcggcga cacggcggcg cacgtggcgg cagagcgtgg agcttttgat
     1741 cggcgtcgcc gacgcgatcg ctgcggcgca tgcagcgcag gtgctacacc gcgacatcaa
     1801 gcccagcaac atcctgatcg gcgcgaacgg ttacgcgaag ctcgcggact tcgggctcgc
     1861 gaagctcgtc gagcccaagg acgcggcact ctcgcgcgtg ggcggtgtca cacgccccgg
     1921 cgtcatcgtc ggc
//
LOCUS       DATCUD010000624         3068 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98670, whole genome shotgun sequence.
ACCESSION   DATCUD010000624 DATCUD010000000
VERSION     DATCUD010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3068
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98670"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="VIQ99_09080"
     CDS             <1..453
                     /locus_tag="VIQ99_09080"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY9183340.1"
                     /translation="AEREVISAAQTFGVALIPWAPLCGGLLTGKYRRDDQSAAGRWQG
                     GKDNFGRPATPAAFDVIETLVALATEKGCTPSQLALAWNASQPGITAPIIGPRTLEQL
                     VDNLGAVAVKVTDADCSRLDVVAPPWSATLRYYDAAMAIDFRPNLARW"
     gene            472..1707
                     /locus_tag="VIQ99_09085"
     CDS             472..1707
                     /locus_tag="VIQ99_09085"
                     /inference="COORDINATES: protein motif:HMM:NF013715.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEY9183341.1"
                     /translation="MSSPQKPLWALLGPGLLLAATGVGGGDLATATFVGGMLGTAVLW
                     AILVGAFMKFVVTEGLARWQLATGETLIEGVARRLGPVVIWIFLPYFLLWSFFVGSAQ
                     MSANGVALHAMLPAFDDARDGKIVFGALASVAGLAIVLRGGFRWFNVAMKVCIGVMFV
                     SVVITAAALWPGTGDVLRGLFVPGIPRADTGAVTWTVALIGGIGGTLTVLSYGYWMRE
                     EGRTDPKDLRACRIDLAASYLMMAVFGIAMVIVGQAVRLEGEGTAMLIVLSDRLGEEL
                     GPTGKWLFLFGTLGTVFSSLLGVWQATPYLFAECWRLGVRPSAAAVDTRSPPYRWFLF
                     LITFVPMMGLFFSFREVQKLYTVIGAYIFPTLALALIVFNSRSAWIGQRYKNHPVTII
                     VLAGVLGFFTWLALAGIDA"
     gene            1710..>3068
                     /locus_tag="VIQ99_09090"
     CDS             1710..>3068
                     /locus_tag="VIQ99_09090"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY9183342.1"
                     /translation="MTALSHIRAPKPLNVSLPQHESLVHMLLAAVDAQPSLPAVICEK
                     ERITYAEFGRAVAGLARRLEAAGAKRGERVILMMANSIEMDVALFAAMATGAQVGPLN
                     PFLTPSELKKQLVDVQACAVICDAITKDKAAAVAAEYGIRTNILLGSGGVTLDEWKRD
                     PALALDRSRLPKADDLALLIFTGGSTGIPKGVNHTHRGLFLSCVQHVTVWPCKFGQER
                     FLNVAPMFHIWGFGFSTLVPIYTQSTLVMVPRYDADKVVQGLSDHKITVFAGGPAPIY
                     MGLLTSPLFAGADLKSLKYCPSGGAPCPAELHREWLEKTGQPLLEGWGMTEGAPFCLN
                     TLDGKRKLLSVGNPVPGNELQVVDLETGDRVLPLGERGELRVRSPTLMTGYRNHPEET
                     ARTLRDGWVHTGDIGYVDDEGFVFLVDRKKDMVIVGGFNVYPREVDEVLFKHPKIREA
                     ATV"
BASE COUNT          472 a          974 c         1058 g          564 t
ORIGIN      
        1 gccgagcgag aggtgatttc ggcggcgcag accttcggtg tggcgttgat tccctgggcg
       61 ccgttgtgcg gcggcttgct gacgggcaag tatcggcgcg acgatcagag tgcggcgggg
      121 cggtggcagg gcggcaagga caacttcggc cggcccgcga cgccggccgc gttcgacgtg
      181 atcgagacgc tggtggcgct cgcgacagag aaggggtgca cgccgtcgca gctcgctctc
      241 gcgtggaatg cgtcacagcc cgggatcacg gcgccgatca tcgggccgcg cacgctcgag
      301 cagctcgtcg acaacctcgg tgcggttgcg gtgaaagtca cggacgccga ctgctcgcgg
      361 ctcgacgtcg tcgcgccccc gtggtccgcg acgctgcgct actacgatgc cgcgatggcg
      421 atcgatttcc ggccgaacct cgcgcgctgg taacgtacgg cgagcaagag aatgtcttcg
      481 ccgcaaaagc cgctgtgggc gttgctcggt cccggtttgt tgctcgccgc gaccggcgtc
      541 ggcggcggcg atctcgcgac cgcgacattc gtgggcggca tgctcggcac ggccgtgctg
      601 tgggcgatcc tagtcggcgc gttcatgaag ttcgtcgtga ccgaagggct cgcgcgctgg
      661 cagctcgcga cgggcgaaac gctgatcgaa ggtgtcgcgc gccggctcgg ccccgtcgtg
      721 atctggatat tcctgccgta cttcctgctg tggtcgttct tcgtgggttc cgcgcagatg
      781 agcgcgaacg gtgtcgcgct gcacgcgatg ttgccggcat tcgacgacgc ccgcgacggc
      841 aagatcgtgt tcggcgcgct cgcgagcgtc gccggactcg cgatcgtgct gcgcggcggc
      901 ttccgttggt tcaacgtcgc gatgaaggtc tgcatcggcg tgatgttcgt gtcggtcgtg
      961 atcacggccg ccgctctgtg gcccggcacc ggcgacgtgc tgcggggctt gttcgtgccg
     1021 ggcatcccgc gcgccgacac gggcgccgtt acatggaccg tcgcgttgat cggcggtatc
     1081 ggcggcacgc tgacggtgct gtcgtacggc tattggatgc gcgaggaggg tcgcacggac
     1141 cctaaggatc tacgcgcgtg ccggatcgat ctcgcggcga gctatctgat gatggcggtg
     1201 ttcggcattg cgatggtgat cgtcggccaa gccgtgcgtc tcgaaggcga gggcacggcg
     1261 atgctgatcg tgctgtcgga ccgcctcggc gaggagctcg ggcctacggg caagtggctg
     1321 ttcctgttcg gcactttggg cacggtcttc agcagcctgc tcggcgtctg gcaggccacg
     1381 ccatatctgt tcgccgagtg ctggcgactc ggtgtgcggc cgagcgcggc ggccgtggac
     1441 acgcgctcgc cgccgtatcg atggttcctg ttcctgataa ccttcgtacc gatgatgggg
     1501 cttttcttca gcttccgcga ggtgcagaag ctctataccg tgatcggcgc gtatatcttc
     1561 ccgacgctgg cgctcgcgct gatcgtgttc aactcgcgtt cggcatggat cggacaacgc
     1621 tacaagaatc atccggtcac gatcatcgtg ctcgccggag tgctcggatt tttcacttgg
     1681 ctcgccctgg cgggcatcga cgcttgacta tgacagcact ctcacacatt cgcgcgccca
     1741 agcccctgaa cgtgtcgctg ccgcagcacg agagcctcgt gcacatgctg ctcgcggccg
     1801 tcgatgcaca gccgagcctg ccggccgtga tctgcgagaa ggagcgcatt acctacgccg
     1861 aattcggccg cgcggtcgcg gggctcgcgc gcaggctcga agccgccggc gcaaagcgcg
     1921 gcgaacgcgt gatcctgatg atggcgaact cgatcgagat ggacgtggcg ctgttcgccg
     1981 caatggcgac cggggcgcag gtcgggccgc tgaatccgtt cttgaccccg tccgagctca
     2041 agaagcagct cgtcgacgtg caggcgtgcg ccgtgatctg cgacgcgatc acgaaggaca
     2101 aagccgctgc cgtggccgcg gagtacggca ttcgcacgaa catcctgctc ggctccggcg
     2161 gagtcacgct cgacgaatgg aaacgcgatc cagcgctcgc gctcgatcgt tccagactgc
     2221 cgaaggcgga cgatcttgcg ctgctgatct tcaccggcgg ctcgaccggc atcccgaagg
     2281 gtgtgaatca cacgcaccgc gggttgttcc tgtcgtgcgt gcagcacgtg accgtgtggc
     2341 cgtgcaagtt cggccaggaa cggttcctga acgtggcacc gatgttccac atctgggggt
     2401 tcggcttctc gacgctcgtg ccgatctaca cgcagagcac gctcgtgatg gtaccgcgtt
     2461 acgacgccga caaagtcgtg caagggctct ccgatcacaa gatcacggtg ttcgcgggcg
     2521 ggcccgcgcc gatctacatg ggcttgctga cgagcccgtt gttcgcgggc gcggatttga
     2581 agtcgctcaa atactgcccg tccggcggcg cgccatgccc cgccgagctg catcgcgaat
     2641 ggctcgagaa gaccggccag ccgctgctcg aaggctgggg catgaccgag ggcgcaccgt
     2701 tctgcctgaa cacactcgac ggcaagcgca agctcttgtc cgtcggcaat cccgtgcccg
     2761 gcaacgagct acaagtcgtc gacctggaga ccggggaccg cgtgttgccg ctcggcgagc
     2821 gcggcgagct ccgcgtgcgc agcccgacat tgatgaccgg ctaccgcaat catccggaag
     2881 agaccgcgcg cacgctgcgc gatggctggg tccacaccgg cgacatcggt tacgtcgacg
     2941 acgaaggctt cgtgttcctc gtcgaccgca agaaggacat ggtcatcgtc ggcggcttca
     3001 acgtgtaccc gcgcgaggtc gacgaggtgc tgttcaagca tccgaagatt cgcgaggccg
     3061 cgaccgtc
//
LOCUS       DATCUD010000625         2869 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70257, whole genome shotgun sequence.
ACCESSION   DATCUD010000625 DATCUD010000000
VERSION     DATCUD010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2869)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2869)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2869
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70257"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..982)
                     /locus_tag="VIQ99_09095"
     CDS             complement(<1..982)
                     /locus_tag="VIQ99_09095"
                     /inference="COORDINATES: protein motif:HMM:NF014919.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HEY9183343.1"
                     /translation="MTSPTERAAEADVPLRDADIERLLQGRLHEPRHVLGVHAVGAGD
                     VIVRALLPNALRVRLLEPAVELIRLAGTPLFVWTGPRSGVTTPLRLRFESTDGRWHER
                     YDPYSFALEIDDSDLARFASGSHIHAHKFLGAHERTIAGVRGVRFAVWAPNAERVSVV
                     GTFNHWDGRCHPMSVRGTTGVWELFIPEIGPGELYKYEISTRESRELKLKSDPYGASF
                     EQRPATAGITTAPSTFEWDDAQWLAERSHRDWLREPISIYEVHLGSWRRDAAGHFLRY
                     GEIAVQLAEYVKDLGFTHVELMPITEHPLDDSWGYQCTGYFAPTSRHGSAD"
     gene            1036..2301
                     /gene="glgC"
                     /locus_tag="VIQ99_09100"
     CDS             1036..2301
                     /gene="glgC"
                     /locus_tag="VIQ99_09100"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011813905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008878 - glucose-1-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HEY9183344.1"
                     /translation="MRQIPRRRLVSHLTRGTVAVVMAGGRGQRLMHLTDHRAKPATPF
                     GGKYRIIDFSLSNCVNSGIRQIFILTQYKAHSLIQHVQRGWGYLHGELGEFIDIVPAQ
                     QQLGEIWYRGTADAVYQNLDMIRQHRPETVLILAGDHVYKMDYGPLVAFHKESGADIT
                     IGGVQVPIAQAHEFGVMTLGADHRVVGFDEKPTEPRPMPGREGIALASMGIYVINPEF
                     MREALERDAARPDTRHDFGRDIVPEAVANRRVFAYPFEDVETKAQRYWRDVGTVDAYY
                     NANLELIHVTPELNLYDEAWPIWTYQQQVPGAKFILDEEGRRGLAINSMVAGGCIVSG
                     AVIRESLLFFNVFVDEGTEVRRSVVLPEVEIGRSCYIANAIVDEGCSIPHGTVIGRDR
                     VADSQHFHVTDQGVVLVTRSMLAGLRRGA"
     gene            2310..>2869
                     /locus_tag="VIQ99_09105"
     CDS             2310..>2869
                     /locus_tag="VIQ99_09105"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF014499.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HEY9183345.1"
                     /translation="MDLFATRRAGVLLHPTSLPGLGSRGKLGADARRFVDWLAAGAFS
                     VWQTLPLGVPDAYGSPYGLRSAYAGDPELIDSADLEAVERLPARIDAAGDRTARYASF
                     AAHATVEQRHAFAKFLRRRRRWLLPYGLFELMSARFGGAPWWQWPAEYRDIEPTALRD
                     CLARNRSQLRALYFEQYLFELQWFAL"
BASE COUNT          483 a          931 c          949 g          506 t
ORIGIN      
        1 cgtccgccga accgtgccgg ctcgtggggg cgaagtagcc ggtgcattgg taaccccacg
       61 agtcgtcgag cggatgctcc gtgatcggca tgagctcgac atgagtgaag cccaagtcct
      121 tgacgtactc ggcgagctgg acggcgatct ccccgtagcg aaggaagtgg ccggccgcgt
      181 cgcgccgcca cgagcccaaa tgcacctcgt agatcgagat gggctcgcgg agccagtcgc
      241 ggtgcgaacg ctccgcgagc cactgtgcat cgtcccactc gaacgtcgac ggtgccgtcg
      301 tgatgccggc ggtggcgggt cgctgctcga acgaagcgcc gtacggatcg ctcttcagct
      361 tcagctcgcg gctctcgcgc gtggagattt cgtatttgta gagctctccg gggccgatct
      421 cggggatgaa cagctcccac acacccgtag tgccgcgcac gctcatcgga tgacagcgcc
      481 cgtcccagtg attgaacgtg ccgacgacac tcacgcgctc ggcgttcggc gcccagacgg
      541 cgaagcgcac accgcggacc cccgcgatcg tgcgctcgtg agcgccgagg aacttgtgcg
      601 cgtggatgtg ggagccggag gcgaagcgcg cgagatcgct gtcgtcgatc tcgagcgcga
      661 acgagtatgg atcgtagcgc tcgtgccagc gtccgtcggt ggattcgaaa cggagccgca
      721 acggcgtcgt aactccactt cgcggcccag tccacacgaa cagtggcgtg cccgcaagcc
      781 gtatgagctc cacggcgggc tcgagcagac ggacgcgcag tgcgttcggt agcaacgcgc
      841 gcacgatgac gtcaccggcg ccgacggcgt gcacaccgag cacgtgtcgc ggctcgtgca
      901 gtcggccttg cagcaaccgt tcgatgtcgg cgtcgcgcag cggcacatcg gcctctgccg
      961 ctcgttcagt gggcgacgtc atacgtatag ttccccgtta gacaggcgga gtcgttcggt
     1021 agtagcgtgt aacgaatgag gcagattccg cgccgccgtc tcgtcagtca cctcactcgc
     1081 ggcacggtcg cggtggtcat ggccggcggc cgcggtcaac ggctcatgca tctcacggac
     1141 catcgtgcca aaccggcgac gccgttcggg ggcaagtaca ggatcatcga cttctctctg
     1201 tcgaactgtg tcaattccgg catccgccaa attttcatcc tgactcagta taaggcgcac
     1261 tctctgatcc agcatgtgca gcgtggctgg ggctacctgc acggcgagct cggcgagttc
     1321 atcgacatcg ttcccgcgca gcagcagctc ggcgagatct ggtaccgcgg cacggccgat
     1381 gcggtctacc agaacctcga catgattcgg cagcatcgtc cggagaccgt gctgattttg
     1441 gccggcgacc acgtctataa gatggattac ggccccctgg ttgcgttcca taaggaaagc
     1501 ggcgccgaca tcacgatcgg gggtgtacag gtgccgatcg cgcaggcgca cgagttcggg
     1561 gtcatgacgc tcggcgcgga tcatcgcgtc gtcggtttcg acgagaagcc gacggagccg
     1621 cgaccgatgc cggggcgtga aggtatcgcg ctggcgtcga tgggcatcta cgtgatcaac
     1681 ccagagttca tgcgcgaggc gctcgagcgc gatgcggcgc ggccggatac gcggcacgac
     1741 ttcggccgcg acatcgtgcc ggaagccgtc gcgaatcgac gcgtattcgc ctatccgttc
     1801 gaggacgtcg agaccaaggc gcagcgctac tggcgcgatg tcggaaccgt cgatgcctac
     1861 tacaacgcga acctcgagct gattcacgtg acccccgagc tcaatctcta cgatgaggct
     1921 tggccgatct ggacgtacca acagcaggtg cccggcgcca agttcatcct cgacgaagaa
     1981 ggtcgccggg ggctcgcgat caactcgatg gtcgccggcg gctgcatcgt ttccggggcg
     2041 gtgatccgcg agtcgttgtt gttcttcaac gtgttcgtcg acgagggaac ggaggtgcgc
     2101 cggtcggtcg tgttgcctga ggtcgaaatc ggccgcagct gctatatcgc caacgcgatc
     2161 gtcgacgaag ggtgcagcat cccgcacgga accgtcatcg gccgcgaccg agttgccgac
     2221 agtcagcact tccacgtcac cgatcagggc gtcgtgctcg tgacgcgcag catgctggcc
     2281 ggcttgcgtc gcggcgcctg aattcgcgta tggatctgtt cgccacgcgc cgggccggcg
     2341 tcttgctgca tccaacctcg ctgccgggct taggatcgcg cggcaagctc ggcgccgacg
     2401 cgcgccgctt cgtcgactgg ctcgcggcag gtgcgttcag cgtctggcag acgctgccgc
     2461 tcggcgtccc cgatgcgtac gggtcgccgt atgggcttcg ctcggcgtac gccggcgatc
     2521 ccgagttgat cgacagcgcg gatctcgagg cggtcgaacg gttgcccgcc cgcatcgacg
     2581 cggccggaga ccgcacggcg cgttacgcct cgttcgcggc acacgcgacc gtggagcagc
     2641 gacacgcgtt cgcaaaattc ctacgcaggc gccgccgctg gctgctgccc tatggccttt
     2701 tcgagctcat gagcgcgcgt ttcggcggag ccccttggtg gcagtggccg gccgaatacc
     2761 gcgacatcga gccaaccgca ctgcgcgatt gcctcgcacg gaaccgctcg cagctccggg
     2821 ccctctactt cgagcagtac ctgttcgagc tgcaatggtt cgcgctgaa
//
LOCUS       DATCUD010000626         1853 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55933, whole genome shotgun sequence.
ACCESSION   DATCUD010000626 DATCUD010000000
VERSION     DATCUD010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1853
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55933"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..1022)
                     /locus_tag="VIQ99_09110"
     CDS             complement(21..1022)
                     /locus_tag="VIQ99_09110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013899836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY9183346.1"
                     /translation="MNDLREALTAAGARPRHVVLALRAWARGLPLDAFAQRQDTQFNA
                     RLRAALPVLAARFGALATVREEHAGADGSVRLLLALRDGRTIESVLLPGDGVCVSTQV
                     GCAVGCVFCMTGRDGLTRQLTSAEIVAQVSLARARRRIRRVVFMGMGEPAHNLDNVLE
                     AIELLGTEGDLASKNLVFSTVGDKRVFERLPKAAVRPALALSLHTTDPKLRAQLLPRA
                     PRIDPAELVALADEYSQTTKYPTQYQWTLLEGINDGDDELERIAALLAGKYAVMNFIP
                     YNAVDGAGFRRPSWQRAAAMSRYLHKRGILAKLRRSAGQDVEGGCGQLRARARVRVG"
     gene            complement(1026..1652)
                     /locus_tag="VIQ99_09115"
     CDS             complement(1026..1652)
                     /locus_tag="VIQ99_09115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183347.1"
                     /translation="MHTRKIVAVLCSFVAAAAYAQVGSNMGVLDASSAKEAELTTVPH
                     VDAALAAKIVASRPFADAVALDKLLGASLSAGQRQELYGRLFVTINLNNATREEILLI
                     PGVTDRLAHEFEEYRPYTSLEQFRREIGKYVSAAEVARLEQYVFVPMNLNQASADAFL
                     TIPGMTSRMVHEFEEYRPYTSFEQFRREIGKYVDQKEVARLERYLVIE"
BASE COUNT          283 a          629 c          608 g          333 t
ORIGIN      
        1 cgccgcgtgc acggaggatc ctagccgact ctcacccgtg cccgcgcgcg gagctgaccg
       61 cacccgccct cgacgtcctg ccccgccgag cggcgcagct tcgcgagaat gccgcgcttg
      121 tgcaggtacc gcgacattgc cgcggcgcgc tgccacgacg gccgccgaaa ccccgcgccg
      181 tcgaccgcgt tgtacggaat gaaattcatg accgcgtatt ttcccgcgag caacgccgcg
      241 atccgctcga gctcgtcgtc gccgtcgttg atgccttcga gcagcgtcca ctggtattga
      301 gtcggatatt tcgtcgtttg cgagtattcg tcggcgagtg ccacgagctc ggccggatcg
      361 atccggggcg cgcgcggcaa cagttgcgcg cggagcttgg ggtcggtcgt gtgcagcgat
      421 agcgccaacg cgggccttac cgctgccttc ggcaatcgtt cgaacacacg cttgtcgccg
      481 accgtcgaga acacgagatt cttgctcgcg agatccccct cggtgccgag cagctcgatc
      541 gcctcgagca cgttgtcgag gttgtgggcg ggctcgccca tgcccatgaa cacgacgcgg
      601 cggatgcggc ggcgcgcgcg cgcgagcgat acttgcgcca cgatctcggc gctcgtcagc
      661 tgccgcgtca ggccgtcgcg gcccgtcatg cagaacacgc agccgaccgc gcacccgacc
      721 tgcgtagaga cgcagacgcc gtcacccggc aacagcacgc tctcgatcgt gcggccatcg
      781 cggagcgcca gcagcagacg cacggagccg tcggcgcccg catgctcctc gcgcaccgtc
      841 gcgagcgcgc cgaatcgcgc cgcgagcaca ggtaacgccg cgcgcaaccg cgcgttgaac
      901 tgcgtgtcct ggcgctgggc gaacgcgtcg agcggcaggc cgcgcgccca cgcgcgcagc
      961 gccagcacga cgtgacgcgg ccgggcgccg gccgcggtta gcgcctcgcg gagatcgttc
     1021 aagcgttact cgatgacgag atagcgttcg aggcgcgcga cttccttctg atcgacgtac
     1081 ttgccgatct cgcgccggaa ctgctcgaag ctcgtgtagg gccggtattc ctcgaactca
     1141 tggaccattc tcgacgtcat gccggggatc gtcagaaagg cgtcggcaga cgcctggttc
     1201 aaattcatcg gcacgaacac gtattgctcg agtcgtgcaa cctcggcggc cgagacgtac
     1261 ttgccgatct cgcgccggaa ctgctcgagg ctcgtgtagg gccggtattc ctcgaactcg
     1321 tgtgccaagc gatcggtgac gcctgggatc agtagaatct cttcgcgcgt cgcgttgttc
     1381 aggttgatcg tgacgaacag ccgcccgtat agttcctggc gctgtcccgc gctcagcgat
     1441 gcgccgagca gcttgtcgag cgcgaccgca tcggcgaatg gccggctcgc gacgatcttc
     1501 gccgcgagcg ccgcgtccac gtgtggcacc gtcgtgagct ctgcctcctt cgcggagctc
     1561 gcgtcgagca cgcccatgtt gctaccgacc tgcgcgtacg cggccgcggc gacgaatgag
     1621 cagaggaccg caacgatttt tcgggtgtgc atggcgaggc tccttggagt tgtgctcggt
     1681 ctgatgaatt cctaccgcgt gttggcagcg ctcctggctt tgccgtgggc gttgctcgca
     1741 atcggttatg cgtctggcca gctattctac ggcgagctga tccacgcgtc aggtgagtgg
     1801 tcgatctggc tcctgatcct ggcgctcgcg gtgacacccg tgcgccgcgt gtt
//
LOCUS       DATCUD010000627         2241 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55955, whole genome shotgun sequence.
ACCESSION   DATCUD010000627 DATCUD010000000
VERSION     DATCUD010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2241)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2241)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2241
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55955"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..1811
                     /locus_tag="VIQ99_09120"
     CDS             198..1811
                     /locus_tag="VIQ99_09120"
                     /inference="COORDINATES: protein motif:HMM:NF019157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HEY9183348.1"
                     /translation="MRPKRHPGLGCAVASALALIGVAPAFAQDTRSGAPVTCANLKSV
                     RVPKTVVAVAESVPAGQFRPAAAPAFGPPIDYSQLPAFCRVVGTILATAESDIRFELW
                     LPEEWNGKFMQTGNGGAAGAIVQASLVDPLMRGYAVTNTDTGHQGAGGDFGWASQPER
                     LVDYQYRAVHELTVVGKALTAFHYGREADRSYWLGCSTGGRQGLKEAQRYPEDYDGIV
                     AGAPASNWSALMALSITIQRNLGEGGLGVDKLGVLKEAAIAACDADDGVADRVITNFA
                     TCGFDPTSLQCPAGPTAQCLSPTEVAAAQRIYAGVVDGRGQTVIPGTGFGSEPLWAAY
                     ASPQFAIGTNYFRNVVAKDPNWNPAAFDVDRDLARAEAVDNGAAKAMDPDLSEFVKRG
                     GKLITYHGTTDGLIPYGNSVSYHEAVVEELGERRARDSVKLYLVPGMDHCSGGEGAFA
                     VDWLTPLENWIENGEEPAALAAAHPPATPGPPGAPPAPASPPFTRPVCPYPQVPTYDG
                     SGDVADAASFECVEPGGERPARRVLQIGR"
     gene            1831..>2241
                     /locus_tag="VIQ99_09125"
     CDS             1831..>2241
                     /locus_tag="VIQ99_09125"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9183349.1"
                     /translation="MARGNMDRFLSAWVLLTGFAWPVGAQHATAFDIEDGRRVYQASC
                     ANCHGPDGNLIAGIDFGRGVYRRPFSNDELAEVIVAGLPNTPMPPNPGMSREQALRVV
                     EYLRSMNAGRITASDGDARRGRAVFEGKGECLDCH"
BASE COUNT          362 a          742 c          788 g          349 t
ORIGIN      
        1 cgcagagcgg ctcgccgatg acgtacgtgc tggacggccg ccagtatctc gtgatcgcag
       61 tcagcagtaa cgattatccc ggcgagctca tcgcgtatcg cgtgccggac gtgcgggcga
      121 cggcgaggcc ggcagccggc gcggactagg cccccggagt acactggccg ccggggccgt
      181 ctagcgagga ttcgaccatg cgtccgaagc gacatccggg ccttgggtgc gccgtcgcga
      241 gcgcgctcgc gctcatcggt gttgcgccgg cattcgcgca ggacacgcga agtggcgcgc
      301 ccgtgacatg cgccaacctg aagtcggtgc gcgtgccgaa gaccgtcgtc gcagtcgcag
      361 agagcgtccc cgcgggccag ttccgtcccg cggcggcgcc ggcattcggg ccgccgatcg
      421 attactcgca gttgcccgcg ttctgccgcg tcgtgggcac gatcctggca acggccgaat
      481 cggatatacg gttcgagctt tggctgcccg aagaatggaa cggcaagttc atgcagaccg
      541 gcaacggcgg cgccgccggc gcgatcgtcc aggcgtcgct cgtcgatccg ctcatgcgcg
      601 ggtacgccgt cacgaacacg gacaccggcc atcagggcgc cggcggcgac ttcggctggg
      661 ccagccaacc cgagcggctc gtcgactacc aataccgtgc cgtgcacgag ctgaccgtgg
      721 tcggcaaggc actcacggca tttcactatg gaagggaggc cgaccgatcg tactggctcg
      781 gttgctcgac cggcgggcgc caagggctca aggaagcgca gcgttatccc gaggactacg
      841 acggtatcgt cgccggagcg cctgccagca attggtcggc cctgatggcg ctcagcatca
      901 cgatccagcg caacctgggc gagggcgggc tcggcgtcga caagctcggc gtgctcaagg
      961 aagccgcgat cgccgcgtgc gatgccgacg acggcgtcgc ggatcgcgtg atcacgaact
     1021 tcgccacgtg cggtttcgac ccaacgagct tgcagtgtcc tgcgggtccg acggcgcaat
     1081 gcttgagccc aaccgaggtc gccgccgcgc agcgaatcta cgcgggcgtc gtcgacggcc
     1141 gcggtcaaac cgtgattccg ggcacgggtt tcggaagcga gccgctgtgg gccgcctatg
     1201 cgtcgccgca gttcgcgatc ggaaccaatt atttccgtaa cgtcgtggcc aaggacccga
     1261 actggaatcc tgccgccttc gacgtcgacc gcgatctcgc gcgcgccgag gccgtcgaca
     1321 acggcgcggc gaaggccatg gatcccgatc tctccgagtt cgtgaagcgg ggtggcaagc
     1381 tgatcacgta tcacggcacc acggacgggc tcattcccta cggcaactcg gtgagctacc
     1441 acgaggccgt cgtcgaagag ctcggcgagc ggcgggcccg cgacagcgtg aagttgtatc
     1501 tcgtgcccgg catggatcat tgctcgggcg gcgagggcgc gttcgcagtc gattggctga
     1561 cgccgctcga gaattggatc gaaaacggcg aggagccggc cgcattggcg gccgcgcatc
     1621 cgcccgcgac gcccggtccc cctggtgcgc cgcccgcgcc ggcgtccccg cccttcacgc
     1681 gacccgtgtg cccgtacccg caggtgccga cctacgacgg cagcggcgac gttgccgatg
     1741 cggcgagctt cgagtgcgtc gagccgggtg gtgagcggcc cgcgcggcgc gtgctgcaga
     1801 tcggacgttg acggcgctcc gtcccggatg atggcaaggg ggaatatgga tcgattcttg
     1861 agtgcgtggg tgttgctcac ggggttcgcc tggccggtgg gtgctcaaca cgcgacggcc
     1921 ttcgacatcg aggacggccg acgcgtctat caagcgagct gcgcgaactg ccacggtccc
     1981 gacggcaatc tgatcgcggg catcgacttc gggcgcggcg tgtatcgccg gccgttctcg
     2041 aacgatgagc tcgcggaagt gatcgtcgca gggttgccga acacgccgat gccgccgaat
     2101 cccggcatga gccgcgagca ggcgctgcgc gtcgtggaat acttgcgctc gatgaatgca
     2161 ggccgcatca cggcctcgga cggcgacgcg cgccgcggcc gcgccgtgtt cgaaggcaaa
     2221 ggcgagtgtc tcgactgcca t
//
LOCUS       DATCUD010000628         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77370, whole genome shotgun sequence.
ACCESSION   DATCUD010000628 DATCUD010000000
VERSION     DATCUD010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77370"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..664
                     /locus_tag="VIQ99_09130"
     CDS             <1..664
                     /locus_tag="VIQ99_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183350.1"
                     /translation="PDFTGVWTNYRGAGAPAGNRGAPRAQPLLTPEAQAKSDRYRQVT
                     AGTNYTPGGYCVGGGMPSSMLGSGGYPMEIIQRPEQITIIYEAHNEIRRVYFGDRAPD
                     PASVFPERNGRSVGRWEGDTLVVETDRLVEQVDTQYPHSDQAKIVERYRLTTESDGGK
                     VLTASLTMTDPKFLKEPFTVEKKWQAVPNGRVMTYECTEPEWLELLDRLMSGTADDSR
                     SE"
     gene            684..1070
                     /locus_tag="VIQ99_09135"
     CDS             684..1070
                     /locus_tag="VIQ99_09135"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183351.1"
                     /translation="MSKSSFVWVSAMLLVGAAGGAEAHHSAAQFDFQNTVNVTGIVKV
                     ASFANPHGRFVLTVTDEKRGTRDIEFEAHSRNNMYRQGLRPDMMKVGDEITIRIAPMR
                     NGEDGGYVTALITADGTAIGNITRAD"
     gene            complement(1133..>2030)
                     /locus_tag="VIQ99_09140"
     CDS             complement(1133..>2030)
                     /locus_tag="VIQ99_09140"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183352.1"
                     /translation="QVRAMCEAQMGVTGATAYYAPGNIPGASTLGNRTGNPNLHSENG
                     ETMTIGAVMNFAERTQISIDAYQITITDYIAAQLGESVFRTCYDPAFNPTYAPFTAAC
                     NQILRDPTNGQIGAVDVTYSNSSSVETSGIDLQFDWGTDLAGGNLRLNFLASYLDSFK
                     TKLSPTGAWTEWKGTLGPAGLSGLNSGAFDYRTFTTLSFAKNDWNLGLRWRHLPTIKP
                     SAIVSNPNTTIITTPSYDAFDLSGGFGFRDNWQLRYGIDNLLDEEPVFTNATRYTRGT
                     TTLGGFYDVLGRRAYVGMSVSF"
BASE COUNT          373 a          655 c          663 g          339 t
ORIGIN      
        1 accggacttc accggcgtat ggaccaacta ccgaggcgcc ggcgccccag cgggcaaccg
       61 cggcgccccg agagcccagc cgctgctcac acccgaagcc caggccaagt cggaccgtta
      121 ccggcaggtc acggccggca cgaactacac cccaggcggc tactgcgtcg gcggcggcat
      181 gccgtcgtcg atgctcggct ccggcggcta tccgatggag atcatccagc ggcccgagca
      241 gatcacgatt atttacgagg cgcacaatga gattcgccgt gtctacttcg gcgaccgcgc
      301 gccggatccg gcgagcgtct ttcccgagcg caatggccgc tccgtcggcc ggtgggaagg
      361 cgacacgctc gtcgtcgaga cggaccggct cgtcgagcag gtcgatacgc agtatccgca
      421 tagcgaccag gccaaaatcg tggaacgcta tcggttgacc acggagagcg acggcggcaa
      481 ggtgttgacc gcgtcgctga cgatgacgga tccgaagttc ctgaaggagc cgttcacggt
      541 cgagaagaaa tggcaggccg tgccgaacgg ccgcgtcatg acgtacgaat gcacggagcc
      601 cgaatggctc gagctgctgg accgattgat gtccgggacc gcagacgact cacgcagcga
      661 atgacatcct agagagagca cacatgagca aatcgtcgtt cgtttgggtc agcgctatgc
      721 tgctcgtcgg cgcggccggc ggtgcggagg cgcaccattc cgccgcgcag ttcgacttcc
      781 agaacaccgt gaacgtcacc ggaatcgtca aagtggcgag cttcgcgaac ccgcatgggc
      841 ggttcgtcct gaccgtcacc gacgagaagc gcggcacgcg cgacatcgag ttcgaggcgc
      901 acagccgcaa caacatgtac cggcagggct tgcggcccga catgatgaag gtcggggacg
      961 agatcacgat ccggatcgcg ccgatgcgca atggcgagga cggcggctac gtgacggcgc
     1021 tgatcaccgc agacggcacc gcgatcggca acatcacgcg cgccgactga tcgattgatt
     1081 cgattgccgg aggaaagcgg ggctcaacgc cccgctttct ccgtttcgag ccctagaagc
     1141 tcaccgacat gcccacgtac gcgcggcgcc ccagcacgtc gtagaagccg ccgagtgtcg
     1201 tggtgccgcg cgtgtagcgc gttgcgttcg tgaacaccgg ctcctcgtcg agcaggttgt
     1261 cgatgccgta gcgcagctgc cagttgtccc ggaagccgaa cccgcccgac aggtcgaacg
     1321 cgtcgtatga cggcgtggtg atgatcgtcg tgttcgggtt cgacacgatc gccgacggct
     1381 tgatcgtcgg caggtggcgc cagcgcaggc cgaggttcca gtcgttcttc gcgaagctca
     1441 gcgtcgtgaa cgtccggtaa tcgaacgcgc ccgagttcag gcccgacagg cccgccggcc
     1501 ccaaggtgcc cttccactcg gtccacgctc cggtcgggct cagcttagtc ttgaagctgt
     1561 ccagatagct cgccaggaag ttcaagcgca gattgccgcc cgcgagatcg gtgccccagt
     1621 cgaactgcag atcgatcccg ctcgtctcga cggacgagct gttcgagtac gtgacgtcga
     1681 cagctccgat ctgcccattc gtcggatcgc gcaggatctg gttgcacgcg gccgtaaagg
     1741 gcgcataggt cgggttgaac gccgggtcgt aacaggtcct gaacacggac tcgccgagct
     1801 gcgctgcgat gtagtccgtg atcgtgatct ggtacgcgtc gatcgagatc tgcgtgcgct
     1861 cggcgaagtt catgaccgcg ccgatcgtca tcgtctcgcc attctccgag tgcaggttcg
     1921 ggttgccggt gcggttaccg agcgtgctgg cgcccggaat gttgcccgga gcgtaatagg
     1981 ccgtcgcgcc ggtcactccc atctgcgcct cgcacatcgc gcggacctgc
//
LOCUS       DATCUD010000629         1513 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91459, whole genome shotgun sequence.
ACCESSION   DATCUD010000629 DATCUD010000000
VERSION     DATCUD010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91459"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(210..1331)
                     /locus_tag="VIQ99_09145"
     CDS             complement(210..1331)
                     /locus_tag="VIQ99_09145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011482549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEY9183353.1"
                     /translation="MPPVPDAANLYSETTAAKMSPALANDLPRIYVPHVQSNDVYVID
                     PATFKVVDRFRVGLNPQHVVPSWDLRTLWVTNNAENTTKGSLTPVDPKTGKPGKPIAV
                     DDPYNMYFSPDGKSAIVVAEAMKRLDFRDPVTMKLQYSIDVPGCAGINHADFAIDGKF
                     AIFTCEFAGTVSKIDLVSRKVLGYTQVIQPGRPTQVVKGPDGRDDVICTTWKGMPQDI
                     RASPDGKLFYVADMMADGVHVVDGETFRQVGFIETGKGTHGLYPSRDGKKLYVANRGS
                     NRIHGPPKGKGGVSVIDFATQKVEANWLIPGGGSPDMGNVSADGKWLWLSGRYDHVVY
                     AFDTSNGQVKIIPVGKEPHGLTVWPQPGRYSLGHTGNLR"
BASE COUNT          248 a          479 c          497 g          289 t
ORIGIN      
        1 ctctccccag ttcggaaaga cttgggagca tgcattcgca tcggcatgtt agatgcgcgc
       61 ggggctcaac cgcgcgcgca gcgcgcctat ggtcgacccg cttcgtgcct gctcagcgag
      121 aaaggtccgc ggccgcccgg aacctttctc gctgactaac cgggcaccaa ttgtcggccc
      181 ggctaagccg gccgcgacag ttgttcacgt cacctaaggt ttcccgtgtg acccagcgag
      241 taccggcccg gctgcggcca cacggtgagc ccgtgcggct ccttgcccac cggaatgatc
      301 tttacttgac cattgctcgt gtcgaacgcg tacacgacat ggtcgtagcg gcccgatagc
      361 cacagccact tgccgtcggc actgacgttg cccatgtccg gactgccgcc gcccgggatc
      421 agccagttcg cctcgacctt ctgggtcgcg aagtcgatca ccgacacgcc acctttgccc
      481 ttcggcgggc cgtggatcct gttcgagccg cgattggcga cgtacagctt cttcccgtcg
      541 cgactgggat agagaccgtg cgtgcctttg ccggtttcga tgaagccgac ctggcggaac
      601 gtctcgccgt cgaccacgtg cacgccgtcg gccatcatat cggcgacgta gaagagcttg
      661 ccgtccggcg acgcccggat gtcctgcggc atgcctttcc aggtcgtgca gatcacgtcg
      721 tcccggccgt cgggtccctt gacgacctgg gtcgggcggc cgggctggat cacctgcgtg
      781 tagcccagca ccttgcggct cacgaggtcg atcttgctca cggtgccggc gaattcgcac
      841 gtgaagatcg cgaacttgcc gtcgattgcg aagtcggcgt ggttgatgcc ggcgcaaccc
      901 ggaacgtcga tcgagtactg cagcttcatc gtcaccggat cgcggaagtc gagccgcttc
      961 atcgcttcgg caacgacgat cgcggacttg ccgtcgggcg agaaatacat gttgtacggg
     1021 tcgtcgacgg cgatcggctt gcctggcttg ccggtcttcg ggtcgacggg cgtcaggctg
     1081 cccttggtcg tgttctcggc gttgttcgtc acccacaggg tgcgcaggtc ccacgacggc
     1141 acgacgtgct gcgggttgag gcccactctg aatcggtcga cgaccttgaa cgtcgccggg
     1201 tcgatcacat agacgtcgtt cgactggacg tgcggcacgt agatacgcgg caggtcgttg
     1261 gcgagcgcgg gactcatctt ggcggcggtg gtctcgctgt acagattcgc cgcatcgggt
     1321 accggcggca ttcccggcac ggtggatata agcggtggag cgggagctgc agccggggct
     1381 ttcgccgggg tctgcgcgac gcagggcgtc gacaatgcaa agacaagcgg caacgcgaac
     1441 ggcagataac gagtgcgagc aacgaacgtc acgacggctc ctgaggttgc gggacgagac
     1501 tgcaggaaat tgg
//
LOCUS       DATCUD010000630         1593 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_55977, whole genome shotgun sequence.
ACCESSION   DATCUD010000630 DATCUD010000000
VERSION     DATCUD010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55977"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VIQ99_09150"
     CDS             <1..541
                     /locus_tag="VIQ99_09150"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY9183354.1"
                     /translation="IAHPIGRALLGALSVVCLALTPSGGASAEEVNAETLVDRLQIQD
                     LITRYYNNFGRENAENFADFYAEDAELILGERHFKGRDGIMQAYGRAPGQAPRPPPPP
                     RFSFIVAVDNPLIVVHGDNTATAQLVYTEYVIEKQGDPVKVITQGKEYSNFVKVDGHW
                     RYKTRLIKSGTELPEGWKE"
     gene            724..>1593
                     /locus_tag="VIQ99_09155"
     CDS             724..>1593
                     /locus_tag="VIQ99_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014779976.1"
                     /note="This protein performs the mismatch recognition step
                     during the DNA repair process; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEY9183355.1"
                     /translation="MSAQHTPVMQQYHAIKARFPDTLLFYRMGDFYELFYDDARRTAK
                     LIDIALTRRGQSGGEPIPMAGVPAHSVETYLGRLVRLGESVAICEQIGDPATSKGPVA
                     REVVRIVTPGTLTDAALLADKETRLLAAVTFAPRIGLAWLDLAGGRFSLTELDDLDAL
                     HAEVERLKPAELLLPEDGDAPAWLKVRPGARPRPPWHFDPGTGKRLLCEQLGTRDLAG
                     FDAEDAPAGVGAAGCLLQYAKDTQRAALPHLRTLTRERREHAVILDAQTRRNLEIETS
                     LGGHDEYTLAGLMD"
BASE COUNT          295 a          527 c          530 g          241 t
ORIGIN      
        1 gatcgcacat ccaatcggaa gagcattgct gggcgccttg agcgtcgtct gcctcgcact
       61 gacgcctagc ggaggcgcga gcgccgagga ggtcaacgcc gaaacgctcg tggatcgcct
      121 tcagatccag gatctgatca cgcgttacta caacaatttt ggacgagaga acgccgaaaa
      181 cttcgcggac ttctatgccg aggacgccga gctgatcttg ggcgagcgcc acttcaaagg
      241 cagggacggc atcatgcagg cctacggccg cgcaccggga caagcgccgc gtccacctcc
      301 gccgcctcgc ttttcattca tcgtggccgt cgacaatccg ctgatagtcg tgcacggcga
      361 caacacggcg accgcgcagc tcgtctacac cgagtatgtg atcgagaagc agggcgatcc
      421 ggtcaaggtc atcacgcagg gcaaggaata cagcaatttc gtcaaggtcg atgggcactg
      481 gcgttacaag acgcgtctga tcaagagcgg cactgagctg ccggaaggct ggaaggagta
      541 gacctatacg ccgggcaagc gatattgccc gtggcggacg atttggctgc agctccgcgg
      601 tgggcgtgcc gctcttcgtg atcgtgagcg tagagcgcga gcagggaatc tcggcgcctc
      661 gagaagattt gcgcgcggcc ctccgactac aatggccgca tccaaggact cccaaacgac
      721 gcgatgagcg cgcaacacac gcccgtcatg cagcagtacc acgcgatcaa ggcgcggttc
      781 ccggacacgc tgctgttcta tcgcatgggc gatttctacg agctctttta cgacgacgcg
      841 cgccggacgg cgaagctgat cgacatcgcg ctgacgcgcc gcgggcaatc gggcggcgag
      901 ccgatcccga tggccggcgt gccggcgcat tcggtcgaga cgtatctcgg gaggctcgtg
      961 cggctcggcg agtcggtcgc gatctgcgag cagatcggcg acccggccac gagcaagggc
     1021 cccgtcgcgc gcgaggtggt gcggattgtg accccgggca cgctgacgga cgccgcactg
     1081 ctggccgaca aagagacgcg gctgctcgca gccgtcacgt tcgcgccgcg gatcggcctg
     1141 gcctggctcg atctcgccgg cgggcggttc agcctgaccg agctcgacga cctcgacgcc
     1201 ctgcacgccg aggtggaacg tttgaaaccg gccgagctgc tgctacccga ggacggcgat
     1261 gcgccggcgt ggctgaaggt tcggcccggc gctcgcccgc ggccgccgtg gcacttcgat
     1321 cccggcaccg gcaaacgcct gctctgcgag cagctcggca cgcgcgacct cgccggcttc
     1381 gacgctgaag atgcaccggc cggcgtcggc gcagccggct gtctgctcca gtacgcgaag
     1441 gacacgcagc gcgccgcact gccgcacctg cgcacgctca cgcgcgagcg tcgcgagcac
     1501 gccgtgatct tggacgcgca gacgcgccgc aacctcgaga tcgaaacgag cttaggcggc
     1561 cacgacgagt acacgctcgc cgggctcatg gac
//
LOCUS       DATCUD010000631         1948 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70307, whole genome shotgun sequence.
ACCESSION   DATCUD010000631 DATCUD010000000
VERSION     DATCUD010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70307"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VIQ99_09160"
     CDS             complement(<1..509)
                     /locus_tag="VIQ99_09160"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017970251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEY9183356.1"
                     /translation="MKDDLAIARSVKLRRVVELAKERLGIDADDLEPYGHYKAKLSDA
                     LISRVQKNKDGKLILVTAISPTPAGEGKTTTTVGLGDALNAIGKKAMICVREPSLGPC
                     FGVKGGGAGGGHSQVAPMEDINLHFTGDFHAVSIAHNLLAALVDNHIYFGNSLGFDIR
                     RPMWRRVLD"
     gene            complement(592..>1948)
                     /gene="ahcY"
                     /locus_tag="VIQ99_09165"
     CDS             complement(592..>1948)
                     /gene="ahcY"
                     /locus_tag="VIQ99_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEY9183357.1"
                     /translation="FGRKEMDLAELEMPGLMATRKEYGPKQPLKGARITGSLHMTIQT
                     AVLIETLQALGAKVRWASCNVFSTQDHAAAAIAASGTPVFAYKGESLEEYWDFIDRTL
                     DWGNSEGPNMILDDGGDATLFVHLGYEATKDPKILDKKPGSEEERILLAQLKKSLKKD
                     PKRFANMPKAIRGVSEETTTGVHRLYQMHKAGRLLFPAINVNDSVTKSKFDNLYGCRH
                     SLVDAINRATDVMLAGKIAVVAGYGDVGKGSAQSLRAQSARVIVTEIDPICALQAAME
                     GYTVMTMDEAAKIGDVFVTTTGCVDVITEKHMKQMKHNAIVCNIGHFDNEIQVDKLKK
                     YKWDEIKPQVHSIQMAPGRNIILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELF
                     QNTKKYPLGVYVLPKHLDEKVASLHLEKIGVKLDKLSKAQADYLGVPVNGPYKSDHYR
                     Y"
BASE COUNT          303 a          628 c          605 g          412 t
ORIGIN      
        1 atgtcgagca cgcgccgcca catcggccgg cggatgtcga agccgagcga gttgccgaaa
       61 tagatgtggt tgtccacgag cgccgcgagc aggttgtgcg cgatgctgac ggcgtggaag
      121 tcgccggtga aatgcaggtt gatgtcttcc atcggcgcga cttgcgagtg tccgccgccg
      181 gcgccgccgc ccttcacgcc gaaacaaggt ccaagcgacg gctcgcgcac gcatatcatc
      241 gccttcttgc cgatcgcgtt cagcgcgtcg cccaagccga ccgtcgtcgt cgtcttacct
      301 tcgcccgcag gcgtcggcga gatcgcggtc acgagaatca gcttgccgtc cttgttcttc
      361 tgcacgcggc tgatcaatgc gtccgacagc ttcgccttgt agtggccgta cggctcgagg
      421 tcgtcggcgt cgatgccgag gcgctccttc gcgagctcaa cgactctgcg cagcttcacg
      481 ctgcgggcaa tggctagatc gtctttcatg gttgtctcac cgcgtgcgaa tgggggaaag
      541 gccccagccg cgctctatag gggggaggcg cggccgggga ctactggctc atcaataccg
      601 atagtggtcc gacttgtacg ggccgttgac gggcacgccg aggtagtcgg cttgggcctt
      661 cgacagcttg tcgagcttca cgccgatctt ctcgaggtgc aggctcgcga ccttctcgtc
      721 caggtgcttc ggcagcacgt agacaccgag cggatacttc ttggtgttct ggaacagctc
      781 gatctgcgcc agcgtttggt tcgtgaagct gttcgacatc acgaacgacg gatggccggt
      841 cgcgcaaccc aagttcacga gccggccttc ggccagcagg atgatgttgc gtcccggcgc
      901 catctgaatg ctgtgcacct gcggcttgat ctcgtcccac ttgtacttct tgagcttgtc
      961 gacctggatc tcgttgtcga agtggccgat gttgcagacg atcgcgttgt gcttcatctg
     1021 cttcatgtgc ttctcggtaa tcacgtcgac gcagcccgtc gtcgtgacga acacgtcgcc
     1081 gatcttcgcg gcctcgtcca tcgtcatgac cgtgtagcct tccatcgcgg cctgcagcgc
     1141 gcagatcgga tcgatctccg tgacgatcac gcgcgccgac tgcgcccgca gcgactgtgc
     1201 cgagcccttg ccgacgtcgc cgtagcccgc gacgaccgca atcttgcccg cgagcatgac
     1261 gtccgtcgcg cggttgatgg cgtcgacgag cgagtggcgg cagccgtaga ggttgtcgaa
     1321 cttcgacttc gtaaccgaat cgttgacgtt gatcgccggg aacagcaacc ggccggcttt
     1381 gtgcatctga tacaggcggt gcacgcccgt cgtcgtctcc tccgacacgc cgcgaatggc
     1441 cttcggcatg ttggcgaagc gcttcgggtc cttcttcagc gacttcttga gctgggcgag
     1501 cagaatgcgc tcttcctcgg agcccggctt cttgtcgagg atcttcggat ccttcgtggc
     1561 ttcatagccc aggtgcacga acagcgtcgc atcgccgccg tcgtcgagaa tcatgttcgg
     1621 gccttcgctg ttgccccagt cgagcgtgcg atcgatgaag tcccagtact cctcgagcga
     1681 ctcgcccttg taggcgaaca ccggcgtgcc gctcgccgcg atcgccgccg cggcgtggtc
     1741 ctgcgtcgag aacacgttgc agctcgccca acgcaccttg gcgccgagcg cttgtagcgt
     1801 ctcgatgagc acagccgtct ggatcgtcat gtgcagcgag cccgtgatgc gagccccctt
     1861 caacggctgc ttcgggccgt attccttgcg cgtggccatg aggcccggca tctcgagctc
     1921 ggcgaggtcc atctccttgc gaccgaaa
//
LOCUS       DATCUD010000632         2805 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_13057, whole genome shotgun sequence.
ACCESSION   DATCUD010000632 DATCUD010000000
VERSION     DATCUD010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13057"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..421)
                     /locus_tag="VIQ99_09170"
     CDS             complement(<1..421)
                     /locus_tag="VIQ99_09170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY9183358.1"
                     /translation="MSRDPIERGLEIEQAQLRGFARSVSEIEWLLLILVVLFLFTSNP
                     NLARSPGVLGILLGFAGFVLLFRYGRPLARHTHTKLAIEILAMLAFLTAVLAAVGGVG
                     SPLLNLYLLPIVTAALALGKRAAWLVLVAVCTCYPLIG"
     gene            complement(460..1743)
                     /locus_tag="VIQ99_09175"
     CDS             complement(460..1743)
                     /locus_tag="VIQ99_09175"
                     /inference="COORDINATES: protein motif:HMM:TIGR00225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY9183359.1"
                     /translation="MIRDSRGYQQQRMTLTLRGIVLLFTGVVLGFGLAIGSAAWTAFT
                     TRARAPAVPLDPTIESAALVAEVIDRVRREYVDVVDDRQIVESAIRGIVGELDPHSTF
                     LDAAAYEDIRISTSGNYTGVGLDVDLDDGKVTVVMPLEGAPAARAGILPGDIVVAVND
                     IPVDANDVEATVTRLRGEAGTPVTLDVLRPGTATVLKFALTRTEVHVKTVLGEYLGNG
                     LAYIRVSSFSDGTAADLETVGRDLTAAAGRDELLGIVLDLRSNPGGLLDSAVAVADEF
                     LAEGVVVSGMGRIRQSRFEQAASPGDPFERVPLVVLVNGASASAAEIVAGALQDHGRA
                     QIVGETTYGKGSVQTVMPLGEGSAIKLTTSRYLTPSGRSINGSGIAPDVFVPSDDINR
                     QYRGTNGRVALRDDAQLFQALALISAESITVSSTH"
     gene            complement(1801..>2805)
                     /locus_tag="VIQ99_09180"
     CDS             complement(1801..>2805)
                     /locus_tag="VIQ99_09180"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY9183360.1"
                     /translation="QASRDAGARALRSAEVGIADAARKLAEVRSELRSQQNARRDLGQ
                     NTDRANQRLAAERTALARQVRLHYMTGREELFKLLLSQESPATLGRMLVYFDYYNRAR
                     TMRIAAVSTELAKLDELESATARVEEELTALEAKQATELEALERSRDDRRAAVAKLDA
                     EIRDANSAAAKLKSEERRLTEVVKRLAELAAGFPVDNEEPFSRVKGKLAWPVQGRLAG
                     DYGQPRGAGGPVKWTGVLLEAGAGTPVRAVYHGRVAFADWLQGLGLLVIVDHGGGYMS
                     LYGHNEALLKESGDWVEPGETIAQVGDSGGQARPGLYFEIRYNGEPVNPHPWIAGGPR
                     "
BASE COUNT          462 a          989 c          920 g          434 t
ORIGIN      
        1 cgccgatcag cggatagcat gtgcacacgg ccacgagcac gagccaggcc gcgcgcttac
       61 cgagcgcgag cgcagcggtc acgatcggca gcaggtaaag gttcaagagc gggctcccca
      121 cgccgcccac ggccgcgagc acagccgtca agaacgcgag catcgcgagt atctcgatcg
      181 cgagcttcgt atgcgtgtgc ctcgcgagcg gccggccgta gcgaaacagc agcacgaagc
      241 cggcgaaccc gagcaggata ccgagaacac cggggctgcg cgcgaggttc ggattcgacg
      301 tgaacagaaa cagcacgacg aggatcagga gcagccattc gatctcggag acgctgcgcg
      361 cgaaaccgcg caattgggcc tgctcgatct ccaaaccgcg ttcgatcggg tcgcgactca
      421 tggcgacacg ttaaccgccg ggcacggcgg cgtcgagcct cagtgcgtcg agctgaccgt
      481 gatcgactcg gcgctgatca gcgctaaagc ttggaacagc tgcgcatcgt cgcgcagcgc
      541 gacccggccg ttcgttccgc ggtactggcg attgatgtca tcgctcggca caaatacgtc
      601 cggcgcaatg ccgctgccgt tgatcgaccg ccccgacggc gtcaggtatc gcgacgtcgt
      661 gagcttgatc gcgcttcctt cgccgagcgg catgaccgtc tgcacggagc ccttgccgta
      721 cgtcgtctcg ccgacgatct gcgcgcgacc gtgatcctgc aatgcgccgg ccacgatctc
      781 ggccgccgaa gccgacgcac cgttcacgag caccaccagc ggcacgcgct cgaacgggtc
      841 gccgggtgac gccgcttgct cgaaccggct ctggcgaatg cgacccatgc cgctcacgac
      901 cacgccttcc gcgaggaatt cgtccgcgac cgcgaccgcg gaatcgagca gcccgcccgg
      961 gttgctgcgc aaatcgagca cgattccgag cagctcgtcc cggccggccg cggcggtgag
     1021 gtcgcgcccc accgtctcga gatccgctgc cgtgccatcg gagaacgacg agacacggat
     1081 atacgcgagc ccgttgccga ggtactcgcc gagaacggtc ttgacgtgca cttcggtgcg
     1141 cgtcagagcg aacttcaaaa ccgtcgccgt gccgggccgc agcacgtcga gcgtcacggg
     1201 cgttccggct tcgccgcgca ggcgggtgac cgtggcctcg acgtcgttgg cgtcgacggg
     1261 aatgtcattg accgcgacga cgatatcgcc gggaaggatg ccggcgcgcg cagccggcgc
     1321 gccctcgagc ggcatcacga ccgtgacttt gccgtcgtcg aggtcgacat cgaggcccac
     1381 gcccgtgtag ttgcccgacg tgctgatccg aatgtcttcg taagccgccg catcgaggaa
     1441 cgtcgaatgc gggtcgagct cgccgacgat gccgcggatc gcgctctcga cgatctgccg
     1501 gtcgtcgacg acgtccacgt actcgcggcg cacccggtcg atgacctcgg ccaccaacgc
     1561 ggcggactcg atcgtcgggt ccagcgggac cgccggcgcc ctcgcgcgag tcgtgaacgc
     1621 tgtccaggcg gcgctgccga tcgcgaggcc gaagccgagc acgacccccg tgaacagaag
     1681 aacgatgccg cgtaacgtca gggtcattcg ttgttgttgg tagcccctcg agtcgcgaat
     1741 caccttagca cacgccctca agagccgcga aaccgcgact atttatgtca tgcgcgacct
     1801 tcatcgcgga ccgccggcga tccacggatg cgggttcacg ggctcgccgt tgtaccggat
     1861 ctcgaagtac aggccgggcc gcgcctggcc gcccgagtcg ccgacttgag cgatcgtctc
     1921 gccaggctcc acccagtcgc cggattcctt cagcagcgcc tcgttatgcc cgtacaggct
     1981 catgtagccg ccgccgtgat cgacgatcac gaggagacca agaccctgca gccagtccgc
     2041 gaacgcgacg cggccatgat agacggcccg gaccggcgtc ccggcgcccg cctcgagcag
     2101 cacgccggtc catttcacgg ggccgcccgc gccgcgcggt tggccgtaat cgccggcgag
     2161 gcgcccttgc accggccagg cgagcttgcc tttcacgcgc gagaacggct cctcgttgtc
     2221 gaccggaaaa ccggcggcga gctcggcgag acgcttcacg acctcagtca gacggcgttc
     2281 ctcgctcttg agcttggccg cggccgaatt cgcgtcgcgg atctcggcgt cgagctttgc
     2341 cacggctgca cggcggtcgt cgcgggatcg ctcgagggcc tcaagctcgg tcgcctgctt
     2401 ggcctcgagc gccgtgagct cctcctcgac gcgcgcggtc gcgctctcga gctcgtcgag
     2461 cttcgcgagc tcagtggaga ccgcggcgat ccgcatcgtc cgcgcgcggt tgtagtagtc
     2521 gaagtagacg agcatgcggc cgagcgtggc cgggctctcc tgcgacagca gcagcttgaa
     2581 gagctcctcg cggcccgtca tgtagtggag ccggacttgc cgggccagcg ccgtgcgctc
     2641 ggcggccaac cgctggttcg cgcggtccgt gttctgaccc aagtcgcgcc gggcattctg
     2701 ctgcgaccgc aactccgagc gaacctcggc gagcttccgt gctgcatcgg cgatgccgac
     2761 ttccgcgctc cgcagagctc gcgcgcccgc atcgcggctc gcctg
//
LOCUS       DATCUD010000633         1936 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41687, whole genome shotgun sequence.
ACCESSION   DATCUD010000633 DATCUD010000000
VERSION     DATCUD010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41687"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..268
                     /locus_tag="VIQ99_09185"
     CDS             <1..268
                     /locus_tag="VIQ99_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003541635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY9183361.1"
                     /translation="RIIVTVIGADTVGIIAGVSALLAAANVNIIDISQTTVREFFTMI
                     MMADLTKATVPFDELKRRLNAKGDEMGLKIDAQHEDVFKFMHRV"
     gene            290..1657
                     /locus_tag="VIQ99_09190"
     CDS             290..1657
                     /locus_tag="VIQ99_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012283156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEY9183362.1"
                     /translation="MAIQFTPEEILETIRMVQMENLDVRTITMGISLRNCADPSLEAA
                     ARKSYDKICRAGARLVAVGDEIEREYGIPIINKRVSVTPVALVAEASASDDYVVFAEH
                     LERAAAEIGINFIGGFSALVHKGTTPGDAALIASLPEALARTERVCASVNVATTRAGI
                     NMDAVARMGEMIRATAARTADRDGIGCAKLVVFCNAVEDNPFMAGAFHGIGEPDCVVN
                     VGVSGPGVVANAVEAEPNADFGALATVIKRTAFKITRMGELVGRAASEKLGVPFGIVD
                     LSLAPTPAPGDSVARVLQAMGLERVGTHGSTAALALLNDAVKKGGAMASSYVGGLSGA
                     FIPVSEDAVMIDAAADGAITFDKLEAMTCVCSVGLDMIAVPGDTPAATLAAVIADEAA
                     IGMINRKTTAVRLIPAPGKQVGDVVSFGGLLGRAPVIALHRESSEAFIARGGRIPAPL
                     QALNN"
     gene            complement(1723..>1936)
                     /locus_tag="VIQ99_09195"
     CDS             complement(1723..>1936)
                     /locus_tag="VIQ99_09195"
                     /inference="COORDINATES: protein motif:HMM:TIGR04433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UrcA family protein"
                     /protein_id="HEY9183363.1"
                     /translation="LNLSTPAGAETLYGRIKAAARLVCRDEHSYKREAACQARAIDNA
                     VMAVGSPLLASVHGSATGRIVELVAR"
BASE COUNT          323 a          658 c          669 g          286 t
ORIGIN      
        1 tcgcatcatc gtcaccgtga tcggcgccga cacggtcggc atcatcgccg gggtctcggc
       61 cctgctcgcc gcggccaacg tgaacatcat cgatatctcg cagaccaccg tgcgcgagtt
      121 cttcacgatg atcatgatgg ccgatcttac gaaggcgacc gtgccgttcg acgagctgaa
      181 gcgccggctc aacgcgaagg gagacgagat gggcctcaag atcgacgccc agcacgagga
      241 cgtcttcaag ttcatgcacc gagtctgaag gcgccgatag cgagaccgca tggcgatcca
      301 gttcacaccg gaggagattc tcgaaaccat ccgcatggtg cagatggaga atctcgacgt
      361 ccgcacgatt acgatgggga tcagcctgcg caactgcgcg gacccgagcc tcgaagccgc
      421 ggctcgcaag tcgtacgaca agatctgccg cgccggcgca cgcctcgtcg ccgtcggcga
      481 cgagatcgag cgcgagtacg gcatcccgat catcaacaag cgcgtgtcgg tcacgcccgt
      541 cgcgctggtc gcggaagcga gcgcgagcga cgactacgtc gtgttcgccg agcacctcga
      601 gcgcgccgcg gccgagatcg gcatcaactt catcggcggg ttctctgcgc tcgtgcacaa
      661 aggcacgacg cccggcgacg ccgcgttgat cgcgtcgctg ccggaagcgc tcgcacgcac
      721 ggaacgtgtg tgcgcgtccg tcaacgtcgc caccacgcgc gcgggcatca acatggatgc
      781 ggtcgcgcgc atgggcgaga tgatccgcgc gacggccgcg cgcaccgcgg atcgcgacgg
      841 catcggctgc gcgaagctcg tcgtgttctg caacgcggtc gaggacaacc cgttcatggc
      901 cggcgcgttc cacggcatcg gcgagcccga ctgcgtcgtg aacgtcggcg tcagcggccc
      961 cggcgtggtc gcgaacgcgg tcgaggccga gccgaacgcg gatttcggcg cgctcgcgac
     1021 cgtgatcaaa cgcaccgcgt tcaagatcac gcggatgggc gagctcgtcg gccgcgcggc
     1081 ctcggagaag ctcggtgtgc cgttcggcat cgtcgatctc tctctggcgc cgacaccggc
     1141 gccgggcgac agcgttgcgc gcgtgctgca ggcgatgggg ctcgagcgcg tcggcacgca
     1201 cggctctacg gcggccctcg cgctgctgaa cgacgccgtg aagaagggcg gcgcgatggc
     1261 gtcgagctac gtcggcgggc tatccggcgc gttcattccc gtgtccgagg acgcggtcat
     1321 gatcgatgcc gccgccgacg gcgcgatcac gttcgacaag ctcgaggcca tgacctgcgt
     1381 gtgctcggtc ggcctcgaca tgatcgccgt gcccggcgac acgccggccg cgacgctcgc
     1441 ggccgtgatt gccgacgagg ccgcgatcgg catgatcaac cgcaagacga cggccgtccg
     1501 gctgattccc gcgccgggca agcaagtcgg cgacgtcgtc tcgttcggcg gcttgctcgg
     1561 ccgcgcgccc gtgatcgcgc tgcaccgcga atccagcgaa gcgtttatcg cccgcggcgg
     1621 ccgcatcccc gcgccgctgc aagcgctgaa caattagtgc ggacgcgata aaaaatggcg
     1681 cggccggcgg ggggatgccg gccgcgccaa cgcacacgga gatcaacggg cgacgagctc
     1741 cacgatgcgg cccgtggcgg agccgtgcac ggaggccagc agcgggctcc cgacggccat
     1801 cacggcgttg tcgattgcac gcgcctggca cgcggcttcg cgcttgtagc tgtgctcgtc
     1861 gcggcagacc aggcgcgctg cggccttgat gcggccgtac agcgtttccg caccggcggg
     1921 cgtcgagaga ttgaga
//
LOCUS       DATCUD010000634         1532 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41694, whole genome shotgun sequence.
ACCESSION   DATCUD010000634 DATCUD010000000
VERSION     DATCUD010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41694"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..995
                     /gene="hisG"
                     /locus_tag="VIQ99_09200"
     CDS             90..995
                     /gene="hisG"
                     /locus_tag="VIQ99_09200"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005506183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEY9183364.1"
                     /translation="MRTTTDSRIKIAVQKSGRLTEHSLELLVRCGLSYSRGKDQLICY
                     GENMPVDVLLVRDDDIPRLVQEDICDLGIVGLNIIEERRLELVEQGEKELFTEIGRLD
                     FGQCRLSFGLPAGVPYGGPKSLQGKRIATTYPRILRDYLKKNGVEASIVAFSGAVEIA
                     PSLGKADLICDLVSSGATLRAHQLYEAATILESRAALIQTPKQVSGEKAEWLQRLLLR
                     IQGVLQVKESKYIMLHAPRSALKAITALLPGTESPTIIPLEGRDDKVAVHAVCRENVF
                     WETLEELKKAGASSMLVLPVEKMLS"
     gene            1046..>1532
                     /locus_tag="VIQ99_09205"
     CDS             1046..>1532
                     /locus_tag="VIQ99_09205"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY9183365.1"
                     /translation="MLTRPALAKDASVAAGVAAIIERVRREGDAALLDLTAKLDGVRV
                     RSLEVGDTEIDESGARLTAEQRDAIEAAARNIETFHRLQLPAPIDVDTAAGVRCERVS
                     RPIDSVGLYVPAGSAPLPSTALMLGVPARLAGCSTRVMCSPPQADGRVHPAVLYAART
                     CG"
BASE COUNT          269 a          487 c          518 g          258 t
ORIGIN      
        1 gacgtgtcgc gcgtttcctg gtcgctggca acggcggcta ccaaacggct ctgaaacggc
       61 tctcgccgct gtaggcgcgg agaatcgtca tgcgtacgac caccgactcg cggatcaaga
      121 tcgccgtcca gaaatccgga cgcctgaccg agcactcgct cgagctgtta gtccgttgcg
      181 gcttgagcta ttcgcgcggc aaggatcagc tcatttgcta cggcgagaac atgcccgtcg
      241 acgtgctgtt ggtccgcgac gacgatattc cgcgcctcgt ccaggaggac atctgcgatc
      301 tcggcatcgt cgggctcaac atcatcgagg agcgccgtct cgagctcgtc gagcaaggcg
      361 agaaggagct gttcacggag atcggccgtc tcgacttcgg ccaatgccga ttgtcgttcg
      421 gcttaccggc gggcgttccg tacggcggtc cgaagtcgct gcaaggcaaa cggattgcga
      481 ctacgtatcc gcggattctg cgcgattacc tgaagaagaa cggcgtcgaa gcgtcgatcg
      541 tggcgttctc gggcgccgtg gagattgcgc cgagcctcgg caaggcggac ctgatctgcg
      601 atctcgtctc gagcggtgcg acgctgcgag cgcaccagct ctacgaggct gcgacgatcc
      661 tcgagagccg tgcggccttg attcagacgc cgaagcaggt gagcggcgag aaagccgagt
      721 ggctgcaacg cctattgctg cgaatccaag gcgtgctgca ggtcaaggag agcaaataca
      781 tcatgctgca cgcgccgcgc tccgcgctga aggccatcac ggcgctgttg cccggcacgg
      841 agtcgcccac gatcattccg ctcgagggtc gtgacgacaa ggtcgccgtg cacgccgtct
      901 gccgcgaaaa cgtcttctgg gagacgctcg aggagctcaa gaaagccggc gcgagctcga
      961 tgctcgtgct gcccgtcgag aagatgctgt cgtaggcatg cgcgtcgcga cttggacaat
     1021 cttggcggcg gagcagcagc gaaagttgct cacccgccct gccctcgcga aggatgcgag
     1081 cgtcgccgcg ggcgtcgcgg cgatcatcga gcgcgtgcgc cgtgaaggcg acgccgcact
     1141 gctcgatctc acggcgaagc tcgacggcgt ccgcgtgcga tcgctcgagg tcggcgacac
     1201 cgagatcgac gagtccggcg ctagacttac ggccgagcag cgcgacgcga tcgaagcagc
     1261 ggcacgaaat atcgagacgt tccatcgcct gcagctgccc gcgccgatcg acgtcgatac
     1321 ggcagccggc gtgcgttgcg agcgtgtgtc gcggccgatc gacagcgtcg gcctctacgt
     1381 cccggcgggc tctgctccgc tgccgtccac ggcgctgatg ctgggcgtgc cggcgcggct
     1441 cgcgggctgt agcaccaggg tcatgtgtag cccgccgcaa gcggatggac gagtccaccc
     1501 ggccgtgctc tacgcagcgc gcacgtgcgg ag
//
LOCUS       DATCUD010000635         2514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_48793, whole genome shotgun sequence.
ACCESSION   DATCUD010000635 DATCUD010000000
VERSION     DATCUD010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48793"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="VIQ99_09210"
     CDS             complement(<1..394)
                     /locus_tag="VIQ99_09210"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY9183366.1"
                     /translation="MSFLNPGDVHAPAGPYSHTAVVPPGAELVFVAGQVGMDRDGTVP
                     SMFADQAELTFRNLRSCLAAHGLGVEHVVKLSVFLLPGQDFALLREVRERHFGAHRPT
                     STTVYVPQLASPKFLLEVEAIAVRPLGSR"
     gene            complement(402..1694)
                     /locus_tag="VIQ99_09215"
     CDS             complement(402..1694)
                     /locus_tag="VIQ99_09215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183367.1"
                     /translation="MGSLLTCRRIVPALAALIAAAAVGAESDRHELTIDVSAGYVSAS
                     TDLAAWPEGGLSKLRVTEDGLTAFRAFVDYRGRLTPTLHARVIADYVDDGSSGLDLTE
                     AYIDWRPIPSSPNQHQVRFGAFYPPLSLENGDAGWQSPFTYSYSAINTWLGEEIRPVG
                     AEWSLRRRFERLGNAQELRAFAAGFYGNDPAGTLLFWRGWSLHDRQSRLHDHFDIPDM
                     PTFSNGVVTGTREQTLKPFVDTDHEPGAYAGVEWRYARRALVQLARYDNRADPYSFAD
                     GQWGWRTDFDHLAVQVGLPAEIGLVAQWMHGTTDWLTGASQTGTLSPFVRFVQDEFES
                     KFVMLTRRLGGAHRLALRYDTFSINRLNASPPLESDDGDAWTLSYRLAPESARFSGGI
                     EWLRIDSHRDIFPTFYFVAADQTEDQLRLQFSYRLAAP"
     gene            complement(1679..2356)
                     /locus_tag="VIQ99_09220"
     CDS             complement(1679..2356)
                     /locus_tag="VIQ99_09220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013443033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylamine utilization protein"
                     /protein_id="HEY9183368.1"
                     /translation="MRTKVLLGSAGLRLCSLLVALAPAAQSAAATLEVSVTDEQGRPV
                     AHVAVYITAVNAAPEALRTPTAVMDQQDKQFLPHMLVVQTGTSVQFPNHDDVSHHVYS
                     FSRAKSFELGLYKGQAYPPVVFDVAGTVVLGCNIHDGMLGYIKVVDTPHFALTNDEGV
                     ALIDGLPDAEYTLEVWTPRLRENALPAPRSLVVASGQAPPVAVQLTGRLAPEHSHGKS
                     SLSWDRY"
BASE COUNT          465 a          832 c          832 g          385 t
ORIGIN      
        1 cgcgggagcc caaaggcctg accgcgatgg cctcgacctc gagcaggaac ttcgggctcg
       61 cgagctgcgg cacgtacacg gtcgtggacg tcggtcgatg cgcgccgaaa tgccgctcgc
      121 gcacctcgcg tagcagagcg aagtcctgcc ccggcaacaa gaagaccgat agcttaacga
      181 cgtgctcgac gccgaggccg tgcgccgcga ggcacgagcg aaggttacga aacgtgagct
      241 cggcttggtc ggcaaacatg ctcggcacgg tcccgtctcg atccatcccg acctggcccg
      301 cgacgaacac gagctccgcg ccgggcggaa ctaccgcggt atgcgagtac ggtcccgccg
      361 gagcgtggac gtcgccggga ttcaagaacg acacggcggt gtcagggagc agcgaggcgg
      421 tacgagaact gcaggcgcag ctgatcctcg gtctgatcgg ccgcgacgaa gtagaacgtc
      481 ggaaagatat cgcggtgact gtcgatgcga agccattcaa taccgccgct gaaacgcgca
      541 ctctcgggtg ccaatcgata actcagggtc caagcatcgc cgtcgtccga ctcgagcggc
      601 ggcgatgcgt tcagccgatt gatcgagaac gtatcgtagc gcagcgcgag ccggtgtgcg
      661 ccgccgagtc ggcgcgtcag catcacgaac ttcgactcga actcgtcttg gacgaagcgc
      721 acgaacggcg agagtgtacc ggtctgcgaa gcgcccgtga gccaatccgt cgtgccgtgc
      781 atccattgcg cgacgaggcc gatttcggcc ggcaagccca cctgcaccgc caggtgatcg
      841 aagtcggtcc gccaacccca ctggccgtcc gcgaacgagt acgggtcggc gcggttgtcg
      901 tagcgcgcca gctgcacgag cgcgcggcgc gcgtagcgcc actcgacgcc ggcgtaggcg
      961 ccgggctcgt gatcggtatc gacgaacggc ttcagcgtct gctcccgcgt gccggtgacg
     1021 acgccgttcg agaacgtcgg catgtcgggg atatcgaagt ggtcgtgcaa acggctctgc
     1081 cggtcgtgca gcgaccagcc gcgccagaac agcagcgtgc ccgccgggtc gttcccgtag
     1141 aagcccgccg cgaacgcgcg cagctcctga gcgttgccga gccgctcgaa acgccgtcgc
     1201 agtgaccact cggcgccgac gggccggatc tcctcgccga gccaagtatt gatcgccgaa
     1261 tacgaatacg tgaacgggct ctgccaaccg gcgtcgccgt tctcgagcga cagcggcgga
     1321 tagaacgcgc cgaagcgcac ttgatgctgg ttcggcgagc tcgggatcgg ccgccaatcg
     1381 atgtacgcct ccgtgaggtc gaggccactc gaaccgtcgt cgacgtagtc cgcgatcaca
     1441 cgcgcgtgca gcgtcggcgt caagcgaccg cggtaatcca cgaatgcacg gaacgccgtg
     1501 agaccgtcct ccgtgactcg gagcttgctc aagccccctt cgggccacgc ggcgagatcg
     1561 gtcgacgccg acacgtagcc ggccgagacg tcgatcgtga gctcgtgacg atcactctcg
     1621 gccccgacgg cagcggccgc gatcagcgcc gccagcgccg gtacgattcg gcggcaggtc
     1681 agtagcgatc ccatgacaag ctcgacttac cgtgcgaatg ctccggcgcg agtcggcccg
     1741 tgagctgcac ggcgaccgga ggcgcttggc ccgacgcgac gaccaacgac cgcggcgcgg
     1801 gtagagcgtt ctcgcgcaat cgcggcgtcc agacctcgag cgtgtattcg gcgtccggca
     1861 gaccgtcgat cagcgcgacg ccctcgtcgt tcgtgagcgc gaagtgaggt gtgtcgacga
     1921 ccttgatgta gccgagcatg ccgtcgtgaa tgttgcagcc gagcacgacc gtacccgcga
     1981 cgtcgaacac gaccggcgga tacgcctggc ccttgtagag gccgagctcg aaagacttcg
     2041 cgcgcgagaa cgagtacacg tgatggctca cgtcatcgtg attcggaaac tgcaccgacg
     2101 tgccggtctg cacgacgagc atgtgcggca agaactgctt gtcctgttgg tccatgaccg
     2161 cggtcggcgt gcgcaatgcc tcgggcgccg cgttcacggc cgtgatgtag accgcgacgt
     2221 gggcgaccgg ccggccctgc tcgtccgtca ccgacacctc gagcgtcgcc gcggccgact
     2281 gcgcggccgg cgcaagtgcc acgagcagcg agcacagccg caatccggcg gagccgagaa
     2341 ggaccttcgt gcgcatgcag agcgtgccgc tattagatga gtccggatgt tatgtcgacg
     2401 gttacgtcgc atccgtgacc caccgcacac aaccctttag cgcggctccg tagtatcgca
     2461 actgcatgaa acagtacggc tttcgtcaca aaatcctgat gctcgccgtt gcgc
//
LOCUS       DATCUD010000636         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20425, whole genome shotgun sequence.
ACCESSION   DATCUD010000636 DATCUD010000000
VERSION     DATCUD010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20425"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1645
                     /locus_tag="VIQ99_09225"
     CDS             <1..>1645
                     /locus_tag="VIQ99_09225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011520035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY9183369.1"
                     /translation="KYLNRLLEVDPAGGHAWVEPGIVLDDLNARLKPLGLWYPVDVST
                     SAQATLGGMAANNSCGARSLRYGNMVHNVAAAETWLTSGETLMFGPVSAGPPTGPTRH
                     RELVAKVRELYARERTEIAARVPKVQRRVAGYNLDMASTDSFNMAQLLVGSEGTLGWF
                     RRLKLKLAPLPRHKALGVVHFPTFYRAMELTQHIVELEPAAVELVDRTMIELSREIAS
                     FRATMDKTIRGEPDAILLVEFAGDEQAPQLVKLRALSELMGDLGLPGSVVEIADPAWQ
                     RDVWEVRKAGLNIMMSMKGDGKPVSFIEDCAVPLEHLADYTARLTEVFAKHGTRGTFY
                     AHASVGCLHVRPVLNLRTEHGAKQMRAIAEEACALVKQYKGSYSGEHGDGLVRSEWIE
                     PFLGPRLTQAFAELKRTFDPKGLMNPGKIVAAPKMDDRRLFRFKPDYRTVPVATGLDW
                     SQHELGAENRGRGFAAAVEMCNNNGHCRKFDAGTMCPSYRVTGDERHVTRGRANSLRL
                     ALSGQLGENALASRDLYDTLALCVSCKGCKRECPTGVDMA"
BASE COUNT          278 a          555 c          557 g          255 t
ORIGIN      
        1 caagtacctg aatcggctgc tcgaggtcga cccggccggc ggtcacgcgt gggtggagcc
       61 cggtatcgtg ctcgacgacc tgaacgcgcg cttgaagccg ctgggccttt ggtacccggt
      121 cgacgtgtcg acgtctgcgc aagccacact tggcggcatg gcagccaaca acagctgcgg
      181 cgcccggtcg ctgcgctacg gcaacatggt gcacaacgtc gccgcggccg agacttggct
      241 cacgagcggc gagacgctga tgttcggccc cgtgagcgcc ggaccaccca cgggccccac
      301 ccgccatcgc gagctcgtag cgaaagtccg tgagctctat gcgcgcgaac gcaccgagat
      361 tgcggcgcgc gtgccgaagg tgcagcgccg cgtcgcaggc tacaacctcg acatggcgtc
      421 gaccgactcg ttcaacatgg cgcagctgct cgtcggctcg gagggcacgc tcggctggtt
      481 caggaggctg aagctgaagt tggcccccct gccccggcac aaggcgctcg gcgtcgtgca
      541 ctttccgacg ttctaccgcg ccatggagct gacgcagcac atcgtcgagc tcgagccggc
      601 cgccgtcgag ctcgtcgacc gcacgatgat cgagttgtcg cgcgaaatcg cgtcgttccg
      661 cgcgacgatg gacaagacga tccgcggcga gcccgacgcg atcctgctcg tcgagttcgc
      721 cggcgacgag caagctccgc agctcgtgaa gctgcgcgcg ctcagcgagc tgatgggcga
      781 cctcgggttg cccggcagcg tcgtggagat cgccgatccg gcctggcaac gcgacgtgtg
      841 ggaagtccgc aaggccggcc tcaacatcat gatgtcgatg aagggcgacg gtaagcccgt
      901 gtcgttcatc gaggattgcg ccgtgccgct cgagcatctc gccgactaca cggcgcggct
      961 gacggaagta ttcgcaaagc acggcacgcg cggcacgttc tatgcccacg cgtcggtcgg
     1021 ttgcttgcac gtgcggccgg tgctgaatct gcgcaccgag catggcgcaa agcaaatgcg
     1081 cgcgatcgcc gaagaagcgt gcgcgctcgt caagcagtac aaaggctcct actccggcga
     1141 gcacggggac ggtctcgtgc gctccgagtg gatcgagccg ttcctgggcc cgcgcctcac
     1201 gcaagcgttc gcggagctga agcggacttt cgacccgaag gggctcatga accccggcaa
     1261 gatcgtcgcc gcgcccaaga tggacgaccg gcgcctgttc cgcttcaagc cggactaccg
     1321 caccgtgccc gtcgcgaccg gtctcgattg gtcgcagcac gagctcggcg ccgagaaccg
     1381 cggccgaggc ttcgcggccg cggtcgagat gtgcaacaac aacgggcatt gccggaagtt
     1441 cgatgccggc acgatgtgtc cgtcgtatcg cgtcacgggc gacgagcgtc acgtgacgcg
     1501 cgggcgcgcg aattcgttgc ggctcgcgct gtcgggacag ctcggcgaga acgcgctcgc
     1561 atcgcgcgac ctctacgaca cgcttgccct gtgcgtctcc tgcaagggct gcaagcgcga
     1621 gtgcccgacc ggcgtcgaca tggcc
//
LOCUS       DATCUD010000637         3135 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98755, whole genome shotgun sequence.
ACCESSION   DATCUD010000637 DATCUD010000000
VERSION     DATCUD010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98755"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VIQ99_09230"
     CDS             complement(<1..511)
                     /locus_tag="VIQ99_09230"
                     /inference="COORDINATES: protein motif:HMM:NF020252.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HEY9183370.1"
                     /translation="MKRNAEQSDTVVLDSGYHAARSVMETLAAKLESALDQRNLELPS
                     LPEVALKIRRALAAEDVSVKEIARLLGADAALAARTLRVANSAMFYRGNGPITSLSAA
                     VSQLGQKMVRNVALSFAAQQVFLGYGSRPLRDLVSGVWAHSVHSAVIAHALARVRTTL
                     NPDEAFLAGL"
     gene            complement(611..1720)
                     /locus_tag="VIQ99_09235"
     CDS             complement(611..1720)
                     /locus_tag="VIQ99_09235"
                     /inference="COORDINATES: protein motif:HMM:NF042665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6607 family protein"
                     /protein_id="HEY9183371.1"
                     /translation="MRTLAAIVVLSVAHFGYAPAATAEPKQFTFSWPFEDGDALKPRG
                     GTTRGAPLTLATEPSDAWRAVQEPGLDKLERDRRAILAMAGGYRTTFDFLETVGFTPG
                     FTPSRPYQSWGTEYIYVVEDRGTFIRLQHLMVMFIADAQGNVQGPFVQKHWRQDWRYE
                     DTDLHVFVGRNRWVHQTRTPGEVRGRWSQAVFQVDDSPRYEALGEWEHYGTYSAWTSE
                     RTARPLPRRETTVRNDYHILEGVNRHTLTPTGWVQEEENLKLVLDEQGQPAADAPYLA
                     RELGVARYERVVGFDFSAGDRYWQRSGEFWRDVRAAWDAVYAERDTFEYLEEADGQEM
                     FVPLFEYADRLDGGEPYDADEAADVIRRTFAAHLR"
     gene            complement(1722..2477)
                     /locus_tag="VIQ99_09240"
     CDS             complement(1722..2477)
                     /locus_tag="VIQ99_09240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013647603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3750 domain-containing protein"
                     /protein_id="HEY9183372.1"
                     /translation="MWLVPPLLFGLAYLDQVEGFVGGAEARRAPVGLAPDPKTTAEPV
                     VQVYAARAVRWRGYFGVHTWVSVKRRDAAEFTTYEVNGWRLRRTGTAVSVDHRPPDAR
                     WFGNRPELLADLRGEGVEELITRMEQAVESYPYADTYRVWPGPNSNTFVAHVLRSAPE
                     LRVDLPATAIGKDYLDPWFVASSPSGTGAQLNVFGLVGALVGLEEGVELSILGATFGV
                     DALDLSLKLPLAGRLGWPRPDPIAVAAAAQEER"
     gene            complement(2556..3008)
                     /locus_tag="VIQ99_09245"
     CDS             complement(2556..3008)
                     /locus_tag="VIQ99_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183373.1"
                     /translation="MSRDGVSAAPQLRTTMTKEHFDSHGARKAAIALLTAIHKSGRYG
                     TMAEVLIALEVIDSNLDGRPHSMKSLSSKLGIPYTSVSRIVYSLTSEASPGGVLKLVP
                     DGKDRRRKQIELDVDALKRTSSHVRALEKAMIDYYGSSVYKLKKDQPN"
BASE COUNT          530 a         1096 c         1000 g          509 t
ORIGIN      
        1 gcaatcccgc gagaaatgcc tcatcggggt tcaacgtcgt cctcacgcgc gccagcgcgt
       61 gcgcgatgac ggccgaatga acgctgtgcg cccacacgcc gctcacgaga tcgcggagcg
      121 gccgactgcc gtagccgagg aacacctgtt gcgccgcgaa cgacaacgcg acgttgcgca
      181 ccattttctg accgagctga gatacggccg cgctcaagct cgtgatcgga ccgttgccgc
      241 gatagaacat cgcgctgttc gcgacgcgca gcgtccgcgc cgcgagcgcg gcatcggcgc
      301 cgagcaggcg cgcgatctcc ttgaccgata cgtcctcggc ggcgagcgcg cgccgaatct
      361 tcagcgcgac ttcgggcagc gacggcagct cgagattgcg ctgatccagc gcgctctcga
      421 gcttcgcggc caacgtctcc atcacggaac gcgccgcgtg atagccgctg tcgagaacga
      481 cggtgtcgct ctgctctgcg tttcgtttca tggcgggcag tcgcgccggg tccacgccgg
      541 ccaggttcga cgcatcaggt atcggccgca ggcgcgggat tcttgagcgc gggaaacgtg
      601 acgcggttcg tcagcgcagg tgggcggcga aggttcgacg tatcacatcg gccgcctcgt
      661 ccgcgtcgta aggctccccg ccgtcgagcc gatcggcgta ttcgaacagc ggcacgaaca
      721 tctcctgccc gtcggcctct tcgagatact cgaacgtgtc gcgctcggca tacacggcgt
      781 cccatgccgc acgcacgtcg cgccagaact cgccgctgcg ttgccagtac cgatcgccgg
      841 ccgagaagtc gaagccgacg acacgctcgt aacgcgcgac gccgagctcg cgcgccaggt
      901 acggagcatc ggccgccggc tgcccctgct cgtccagcac gagcttcagg ttctcctctt
      961 cctgcaccca ccccgtcgga gtcaacgtgt ggcggttgac gccttcgaga atgtggtagt
     1021 cgttgcgcac cgtcgtctcg cgccgcggca acgggcgggc cgtccgctcg ctggtccatg
     1081 ccgagtacgt gccgtagtgc tcccactcgc cgagcgcttc gtaacgcggc gaatcgtcga
     1141 cctggaacac ggcttgcgac caccggccgc gcacttcgcc gggcgttcgc gtctggtgca
     1201 cccagcgatt gcggccgacg aacacgtgca gatccgtgtc ctcgtagcgc cagtcctgac
     1261 gccagtgctt ctgcacgaac ggcccttgca cgttgccttg cgcgtccgcg atgaacatca
     1321 ccatcaggtg ctgcaagcga atgaacgtgc cgcgatcctc gacgacgtaa atgtactcgg
     1381 tgccccacga ctgatagggc cgcgacggcg tgaagcccgg cgtgaatccg accgtctcga
     1441 gaaaatcgaa cgtcgtgcga tagccgcctg ccattgcgag aatcgcgcgg cggtcgcgct
     1501 cgagcttgtc gagccccggc tcttgcacgg cgcgccacgc atcgctcggc tccgtcgcga
     1561 gcgtcagcgg cgcgccgcgc gtcgtgccgc cgcgcggttt cagcgcgtcg ccatcctcga
     1621 acggccagct gaacgtgaat tgctttggct ccgccgtcgc tgccggggcg taaccgaagt
     1681 gcgcgaccga gagaacgaca attgccgcga gcgtgcgcat gtcaccgctc ttcttgagcc
     1741 gccgcggcta cggcgatggg atccggccgc ggccacccga gccgacccgc caacggcagc
     1801 ttcaacgata ggtcgagagc atcgacgccg aaggtggcgc cgagaatgct gagctcgacg
     1861 ccctcctcga gacccaccag tgcgccgacg aggccgaaca cgttgagctg cgctcccgtg
     1921 ccgctcggcg acgaggccac gaaccacgga tcgaggtagt ccttcccaat cgccgtcgcc
     1981 ggcaagtcca cgcgcagctc cggcgccgaa cgcagcacgt gcgcgacgaa ggtgttggag
     2041 ttcgggcccg gccagacgcg ataggtgtcc gcgtacggat acgactcgac ggcctgctcc
     2101 atgcgcgtga tcagctcttc gactccttcg ccgcgcaggt ccgcgagcag ctccggccgg
     2161 ttgccgaacc agcgcgcgtc gggcggccga tggtcgacgc tgacggcggt gcccgtgcgg
     2221 cgtagccgcc agccgttgac ctcgtaagtc gtgaactcgg cggcatcgcg ccgcttcacg
     2281 gacacccacg tatgcacgcc gaagtagccg cgccagcgaa ccgcgcgcgc ggcgtagacc
     2341 tgaacgacgg gctccgcggt cgtcttggga tcgggcgcga gacccacggg cgcgcggcgc
     2401 gcttcggcgc cgccgacgaa cccttcgacc tgatcgagat acgccagccc gaacagcagc
     2461 ggcggaacca accacaacca attggcgctc ggacgtcgca tccgaaacac catagaccgg
     2521 ccggacgggc cggagcaagc gcagcggccg cagaatcagt tcggctgatc tttcttgagc
     2581 ttgtaaaccg agctgccgta gtagtcgatc atcgccttct cgagcgcgcg cacgtgcgag
     2641 ctcgtgcgct tcagcgcatc gacgtcgagc tcgatctgtt tcctgcgtcg atccttgccg
     2701 tcaggcacga gcttcaacac gccgccgggc gaggcctcgg acgtcaacga ataaacgatt
     2761 ctcgacaccg acgtgtacgg aatcccgagc ttgctcgaca gcgacttcat cgaatgcggt
     2821 cggccgtcga ggttcgaatc gatgacctcg agcgcgatca acacttcggc catcgtgccg
     2881 taccgccccg acttgtggat cgcggtcagc agcgcgatcg cggccttgcg ggccccatgg
     2941 gaatcgaagt gctctttcgt catcgtggtc cgcaactgcg gagccgcgga cacaccgtcc
     3001 ctactcactg ttcactccct tcgagcgcgc cgaaagatca tcggcggcgg cagtctattc
     3061 atgccgtcgg gagcgtctca acaccaaact gttcggtacg ggggtatcga atgcggcgag
     3121 ccgagccgcg cgtgc
//
LOCUS       DATCUD010000638         2130 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_6565, whole genome shotgun sequence.
ACCESSION   DATCUD010000638 DATCUD010000000
VERSION     DATCUD010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6565"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2002)
                     /locus_tag="VIQ99_09250"
     CDS             complement(<1..2002)
                     /locus_tag="VIQ99_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011684314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9183374.1"
                     /translation="MGVACGVSAPVAEAQRGAAGGEWSTYGGDLGHTRYSPLEQIDAG
                     NFSRLEIAWRFKTDSLGPNREFNFQSTPLMVDGVIYSTAGSRRAVVALDAANGELLWM
                     HRLDEGQRGQVAPRQLSGRGLAYWQSGDDKRIVYVTPGYQMIALDARTGDRVAGFGVD
                     GIVDLKLNDDQAIDALNGEIGLHATPIVAKNVIIVGAAHPTGANPTSARMTKGYVRGY
                     DARTGERLWIFHTVPMRGEFGTESWLKASNEYTGNTGVWGQISVDPELETVYLPVEQA
                     TGDYYGAERPGDNLYSETLLAVDLNTGERKWHYQLVHHGIWDFDIPCAPILFDTVIDG
                     RTVKAVAQPTKQAFLYVFDRVTGEPLWPIEERPVPQGDVPGEWYSPTQPHPTKPPAYD
                     RQGLTENDLIDFTPALRREALDIVSWHKMGPLFTPPVVSNIDGPLGTLMAPSQDGGTN
                     WQGGSYDPETHILYVASGSTVVSKAVVPPYPGQSEMAFIEGNAVTGPRTTGGSGSAAG
                     GGRSEFRPTERRAATPSDPSRGPPRLALAVQGLPLLKPPYGRISAIDMTRGEILWQVA
                     HGETPDDIKSHPLLQGLSIPRTGQAGSPGTLVTKTLLIAGERLNTTTPEGIGAMLRAY
                     DKATGREVGAVYMPAPQSGSPMTYMLNGEQYLVVAVSGAQYAG"
BASE COUNT          300 a          744 c          724 g          362 t
ORIGIN      
        1 cgcccgcgta ctgcgcgccg ctcacggcga cgacgagata ctgctcgccg ttcaacatgt
       61 acgtcatcgg tgagccgctc tgcggcgccg gcatgtagac cgcgccgacc tcgcgacccg
      121 tcgccttgtc gtacgcgcgc agcatggcgc cgatcccttc gggcgtcgtc gtgttcagtc
      181 gctcgccggc aatcagcaat gtcttcgtca cgagcgtgcc gggcgagccg gcttggcccg
      241 tgcgcggtat cgacaggcct tgcagcagcg gatggctctt gatgtcgtcg ggcgtctcgc
      301 cgtgcgcgac ctgccagagg atctcgccgc gcgtcatgtc gatcgcgctg atgcggccgt
      361 acggcggctt caagagcggc agcccctgca cggccagcgc gagcctcggc ggcccgcgcg
      421 acggatcgct cggcgtcgcc gcgcgccgtt cggtcggccg gaactcgctg cgcccgccgc
      481 ccgcggccga gccggagccg cccgtcgtgc gcggccccgt gacagcgttg ccttcgatga
      541 aggccatctc ggattggccc gggtacggcg gcacgacggc cttgctgacg accgtagagc
      601 ccgaagccac atagagaatg tgcgtctcgg ggtcgtacga gccaccttgc caattcgtgc
      661 cgccgtcctg gctcggcgcc atcaacgtgc cgagcggacc gtcgatgttg ctgacgaccg
      721 gcggcgtgaa cagcgggccc atcttgtgcc acgacacgat gtcgagcgcc tcgcgacgca
      781 gcgccggcgt gaagtcgatc agatcgttct cggtgaggcc ctggcggtcg tatgccggcg
      841 gcttcgtcgg gtgcggctgc gtcggcgaat accattcgcc gggcacgtcg ccctggggca
      901 cgggccgctc ctcgatcggc cacagcggct cgccggtgac gcgatcgaac acgtacagga
      961 atgcctgctt cgtcggctgc gcgacggcct tgacggtccg gccgtcgatc accgtatcga
     1021 acaggatcgg cgcgcatggg atgtcgaagt cccagatgcc gtgatgcacg agctggtagt
     1081 gccacttgcg ctcgccggta ttgagatcga cggcgagcag cgtctcgctg tagaggttgt
     1141 cgccgggccg ctcggcgccg tagtagtcgc cggtcgcctg ctcgaccggc agatacacgg
     1201 tctcgagctc ggggtcgacc gagatctggc cccacacgcc ggtgttgccc gtgtactcgt
     1261 tcgaagcctt gagccagctc tcggtgccga actcgccgcg catcggcacg gtgtgaaaaa
     1321 tccacagacg ctcgccggtc cgcgcgtcgt agccgcgcac gtagcccttc gtcatgcgcg
     1381 cgctggtcgg gttcgcgccg gtcggatgcg cggcaccgac gatgatcacg ttcttcgcga
     1441 cgatcggcgt cgcgtgcagg ccgatctcgc cattcaacgc gtcgatcgcc tggtcgtcgt
     1501 tgagcttgag gtcgacgatg ccgtcgacgc cgaaccccgc gacgcggtcg cccgtgcgcg
     1561 catcgagcgc gatcatctga tagccgggcg tcacatagac gatccgcttg tcgtcgccgc
     1621 tctgccagta cgcgagcccg cgccccgaga gctgccgcgg cgcgacctgg ccgcgctgcc
     1681 cttcgtcgag tcggtgcatc cacaacagct cgccgttcgc ggcgtcgagc gcgactacgg
     1741 cgcggcgcga gccggccgtc gaatagatca cgccgtcgac catcagcggc gtggactgga
     1801 agttgaactc gcggttcggc ccgaggctgt ccgtcttgaa gcgccacgcg atctcgaggc
     1861 ggctgaaatt gccggcgtcg atctgctcga gcggcgagta acgcgtatgg ccaaggtcgc
     1921 cgccgtaggt gctccactcg ccgccggccg caccgcgttg ggcctctgcg acgggcgccg
     1981 acacgccgca ggcaactccc accaagacca ggactccccg tcggatcatg ctcggcctct
     2041 tcggctcgtc gattctccgc ggagtatagg ccgatcaacg catggtgatg acaccagtcc
     2101 gcggcggcgg cggtgccgcg tcggcgttgt
//
LOCUS       DATCUD010000639         1678 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91505, whole genome shotgun sequence.
ACCESSION   DATCUD010000639 DATCUD010000000
VERSION     DATCUD010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91505"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="VIQ99_09255"
     CDS             complement(<1..1003)
                     /locus_tag="VIQ99_09255"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9183375.1"
                     /translation="MLSNRLIKWLTYAGALAVAVLATIVLVYAVQASLRLADLRAWHR
                     SAPQGEFRVAASDAPESFEAYRELEERLFAQVRRDVLDDPAAADAQALSRYNPGSVVS
                     RLALDTIYNRSYELVPPGEARGAVLLVHGLSDSPYSMRGLAETFLAEGYYVLALRMPG
                     HGTVPAGLVDVSWEDWYGAVVLAAKHAAARAGPDKPFLAGGHSTGAALVTLYSLRTLD
                     DPSLPRPEQVYLVSTAIGISEFAVLTNVISGLSFMPWFEKSRWIDVNPEYDPYKYNSF
                     PVNAANQIYRLTRVIQSTIDDLEPTGRLDTMPRVHVFQSIVDSTVTANQVVRGLLGRL
                     "
     gene            complement(1029..>1678)
                     /locus_tag="VIQ99_09260"
     CDS             complement(1029..>1678)
                     /locus_tag="VIQ99_09260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019657548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEY9183376.1"
                     /translation="DERDQRVMLLIDCGRRMRADDRQRGVGTAHFDQVLNAVMLLAYV
                     ALAQGDAVGALTFGTPPGGERLFAPRKGLHALTALMGELYSVQPTPSHSDYVAAAQDL
                     LRRQGKRALVIVITNFRDEDGSELGMALKILRSRHLVLLASVRERIVRELMTQPLSSG
                     NAALDVASAHLYEQSRRDAFHRLSTREALMVDAEPERLGVELVNRYHAVKRAGML"
BASE COUNT          306 a          577 c          538 g          257 t
ORIGIN      
        1 gaagccggcc cagcaaaccg cgcacgacct gattcgccgt caccgtcgaa tcgacgatcg
       61 actgaaacac gtgcacgcgc ggcatcgtgt cgagcctgcc cgtcggctcg agatcgtcga
      121 tcgtgctctg gatcacgcgc gtgagccgat agatctggtt cgccgcgttg accggaaacg
      181 agttgtactt gtatggatcg tactcgggat tcacgtcgat ccagcgcgac ttctcgaacc
      241 acggcatgaa cgacagtccc gagatcacgt tcgtcagcac cgcgaactcg gaaatcccga
      301 ttgccgtgga tacgagatag acctgctcgg gccgcggcaa cgacggatcg tcgagcgtcc
      361 gcagcgagta cagagtcacg agcgcggcgc cggtcgagtg gccgccggcc aggaacggct
      421 tgtccggccc ggcgcgcgcg gccgcgtgct tcgcggccaa cacgacggcg ccgtaccaat
      481 cttcccacga cacatcgacc aggccggcgg gtaccgtgcc gtggcccggc atccgcagcg
      541 cgagcacgta gtaaccctcg gcgagaaacg tttccgcgag gccacgcatg ctgtagggcg
      601 agtcggacaa gccgtgcacg agcagcacag cgcccctggc ttcacccggc ggcacgagct
      661 cgtatgaccg gttgtagatc gtgtcgagcg ccagccgcga cacgacgctt cccgggttgt
      721 agcggctcag cgcttgggca tcggccgccg ccggatcgtc gagcacatcg cgccggactt
      781 gcgcgaacag ccgttcctcg agctcgcgat aggcctcgaa cgactcggga gcgtcggacg
      841 ccgcgacgcg aaactcaccc tgcggcgcgg aacggtgcca cgcgcgcaag tcggccagtc
      901 gcaagctcgc ctgcaccgca tacacgagca cgatcgtcgc gagcactgcg actgcgagcg
      961 cgccggcata cgtgagccat ttgatcagcc gattcgacag caaatcgagc tcccacgccc
     1021 tcggccgatc ataacattcc ggctcgtttc accgcgtgat agcgattgac gagctcgacg
     1081 ccgaggcgct cgggctctgc gtcgaccatc aacgcctcgc gcgtcgacaa gcggtgaaac
     1141 gcatcgcgtc gcgactgctc gtagaggtgc gcgctcgcga cgtcgagcgc cgcattgccg
     1201 gacgacaacg gctgcgtcat cagctcgcgg acgatgcgct cgcgcacgct ggcgagaagc
     1261 acgaggtggc gcgagcgtag gattttcagc gccattccga gctcgctgcc atcctcgtca
     1321 cggaagttcg tgatcacgat cacgagcgcg cgcttaccct gccgccgcag cagatcttgc
     1381 gccgcggcca cgtagtcgga atggctcggc gtcggctgga cgctgtacag ctcgcccatc
     1441 aacgcggtga gagcatgcaa gcccttgcgc ggcgcgaaca ggcgttcgcc gccgggcggc
     1501 gtgccgaacg tcagcgctcc gacggcatcg ccctgagcga gcgcgacgta ggcgagcagc
     1561 atcacggcgt tcaagacctg atcgaaatgc gcggtgccga cgccacgctg ccgatcgtcg
     1621 gcgcgcatgc gcctgccgca gtcgatcaac agcatcacgc gttgatcgcg ctcgtcct
//
LOCUS       DATCUD010000640         1613 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41714, whole genome shotgun sequence.
ACCESSION   DATCUD010000640 DATCUD010000000
VERSION     DATCUD010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41714"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            122..1117
                     /locus_tag="VIQ99_09265"
     CDS             122..1117
                     /locus_tag="VIQ99_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9183377.1"
                     /translation="MTTAHEQLGRSESLASPERREVLRTASKLVAGAALAGVLADAAR
                     AQPAAANAPLSIPGFTPERIATSGGVTINAARAGNGPPVLLLHGAPLTLYTWRDVAPR
                     LAEDYTVVVADLRGYGDSSKPQGLPDHSNYSKRAMALDQVDVMQHFGFERFAVVGQDR
                     GGRVTHRMALDHPDRVTKAALIDIAPTYYLYTHVNIDFVQAYYHWFAYLRPSPVPENE
                     LLAAQAGRQLSPAQAEYQRANGTPEGVHGMCEDYRAGASIDLVHDGADLDKKVRCPLN
                     VLWAENGAMDRLYDVLAIWRERGTSVEGKGMPGGHNMQEGAPNELYAELVRFLRA"
     gene            1266..>1613
                     /locus_tag="VIQ99_09270"
     CDS             1266..>1613
                     /locus_tag="VIQ99_09270"
                     /inference="COORDINATES: protein motif:HMM:TIGR04433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UrcA family protein"
                     /protein_id="HEY9183378.1"
                     /translation="MRSSYSIKLLGPALLAAFVGIATLPAGAAPPSIAESTEVRYADL
                     DLDNAAGIAELYARLQGAAEKVCDSRFHPGTLVVSASWRTCVADALTQAVAAVDRPAV
                     TAYHASNASLPDAR"
BASE COUNT          278 a          549 c          518 g          268 t
ORIGIN      
        1 ccggcgtgtt cctcgcgaca cacccgcccg cccgaaaacc cgacacgatc gcactgctcg
       61 agcggctgtt acgcgaatct gcagccgcgg cctcggcgac acctcaagga gactcgacac
      121 catgacgacc gcacacgaac agcttggccg tagcgagagc ctcgcatcac ccgagcgccg
      181 cgaggtgctg cgtactgcgt cgaagctcgt tgccggcgcg gcgctcgcag gcgtgctcgc
      241 cgatgcggcg cgcgcgcagc cggccgcggc caacgcgccg ctttctatcc cggggttcac
      301 gccggagcgg attgcgacga gcggcggcgt cacgatcaat gcggcgcgag ccggcaacgg
      361 cccgcccgta ttgttgctgc atggcgcacc gctgacgctg tatacgtggc gtgacgtcgc
      421 gccgcgtctg gccgaggatt acacggtcgt cgtcgcggac ctgcgcggct acggcgacag
      481 cagcaagccg cagggattgc ccgaccactc gaactactcg aagcgcgcga tggcgttgga
      541 tcaagtcgac gtcatgcagc acttcggctt cgagcgcttc gccgtcgtgg gtcaagaccg
      601 cggcggccgc gtgacgcatc ggatggcgct cgatcatccg gacagggtca cgaaagccgc
      661 gctgatcgat atcgcgccga cctattacct gtacacacat gtgaacatcg acttcgtaca
      721 agcctattac cactggttcg catacctgcg tccatcgccg gtgcccgaga acgagctgct
      781 ggccgcgcaa gccgggcgtc agctctcacc ggcccaggcc gagtaccaac gcgcgaacgg
      841 cacgcccgaa ggcgtacacg gcatgtgtga ggactaccgc gccggcgctt cgatcgatct
      901 cgtgcacgac ggggccgatc tcgacaagaa agtgcgctgt ccgttgaacg tgctgtgggc
      961 cgagaacggc gcgatggacc ggctctatga cgtgctcgcg atctggcgcg agcgcggcac
     1021 gagcgtcgaa ggcaagggca tgcccggcgg ccacaacatg caggaaggcg cgccgaacga
     1081 gctctatgca gagctcgtga ggttcctgcg cgcgtaacgc taccggccgc ggcgaggttc
     1141 ggatttcggc ctcgcagcca cgttgagttt ttctcaacgc atgttcacgt gttcgtgact
     1201 tgccgctgcg gctcgcgttg cacactgctc ctcgaagttt cacaccacct tctgaggaga
     1261 cagtcatgcg tagctcgtac tcgatcaagc tgttggggcc ggctctgctg gccgccttcg
     1321 tcggcatcgc aacccttccg gccggagccg cgccacccag tatcgcggaa tccaccgagg
     1381 tgcggtacgc cgatctcgat ctcgacaatg ccgctggaat cgccgagctg tatgcgcggc
     1441 tacaaggtgc ggcggagaag gtctgcgact cgcgctttca ccccgggacc ctcgtggtct
     1501 cagcgagctg gcggacctgc gtggccgatg cgctcacgca agccgtcgcc gcagtggata
     1561 gacccgctgt gacggcttac catgcctcga acgcgagcct ccctgacgcg cgc
//
LOCUS       DATCUD010000641         1972 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20432, whole genome shotgun sequence.
ACCESSION   DATCUD010000641 DATCUD010000000
VERSION     DATCUD010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1972)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1972)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1972
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20432"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VIQ99_09275"
     CDS             <1..423
                     /locus_tag="VIQ99_09275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183379.1"
                     /translation="DLADGLDVLNGEGDPRRIRTHAERLLLPRRNETTDIVLLWDLIN
                     YLNRPALTALMECIAARCKRGALAHGLVYYSAKRMPDKPTIFVPADDQHLAQVSMPGI
                     ERPAPRYSPEDLAKCMPRYTVERGRLLRNGMQEFLFKL"
     gene            complement(431..1618)
                     /locus_tag="VIQ99_09280"
     CDS             complement(431..1618)
                     /locus_tag="VIQ99_09280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012374334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY9183380.1"
                     /translation="MSWFKQAAAVTAMNLRSIRERSGTSLVAIVGIAGVVAVLIGIFS
                     IAAGFRAVLEQSGADDVAIVLRGGSTDEMTSGFSQQQTRIIADAPGVLQDGGNPVASS
                     ELYVLVDVPLKSTGTPANVPLRGVGAQAAQLRNGFRIIDGREFRPGTNEVIVGRGAAQ
                     QFAGLDVGAELKSGNQAWNVVGIFADTGSVAESEIWSDAVVLQGAYNRGTSYQSTRVR
                     LESPNALTTFKDALTSDPRVNVSVRTEREYYAAQSRSLVTLVTYVGGTIAILMGLAAV
                     FGALNTMYSAVSARTREIATLRAIGFGALPVVTSVLAEAMLLGAIGGTIGALIAYFGF
                     NGIRASTMNWSSFSQITFAFVVTPTLVVQSLIYALVLGFVGGLMPSLRAARMPITAGL
                     RDS"
     gene            complement(1636..>1972)
                     /locus_tag="VIQ99_09285"
     CDS             complement(1636..>1972)
                     /locus_tag="VIQ99_09285"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183381.1"
                     /translation="TANAMAQGVRERVREIAVLRTLGFSNTLIVSLVLAEGLGVTLVG
                     AALGLWLARGTIDALGVSVSTFLPLLTVPPTTFVSGAALATALGVVSCLLPSAQIWRL
                     SIVEQLRRT"
BASE COUNT          352 a          667 c          637 g          316 t
ORIGIN      
        1 gatctcgcgg acggtctcga cgtgctgaac ggcgagggcg atccgcgccg gattcgtacg
       61 cacgcggaac ggctcttgct gccccggcgc aacgagacga cggatatcgt gctgttgtgg
      121 gacctgatca actacctgaa tcggcccgcg ctgacggcgt tgatggagtg catcgcggca
      181 cgctgcaagc gcggcgcgtt ggcgcatggg ctcgtctact actcggccaa acgcatgccg
      241 gacaagccga cgatcttcgt gcccgccgac gatcagcatc tcgcacaggt ttcgatgccc
      301 ggcatcgagc ggcccgcgcc gcgctattcc ccggaggatc tcgcgaagtg catgccgcgt
      361 tacacggtgg agcgcggccg cctgctgcgc aacggcatgc aggaatttct gttcaagctc
      421 tgagagcggg ttaggagtcg cgcaggccgg ccgtgatcgg cattcgcgcc gcgcgcaagc
      481 tcggcatcaa cccgccgacg aatccgagca ctagcgcgta gatcaagctt tgcaccacga
      541 gcgtcggtgt cacgacgaac gcgaacgtga tctggctgaa cgacgaccag ttcatcgtcg
      601 atgcgcgaat cccgttgaat ccgaaatacg caatcaacgc gccgatcgtg ccgccgatcg
      661 cgccgagcag cattgcttcc gcgagcaccg acgtgacgac cgggagcgcg ccgaagccga
      721 tcgcacgcag cgtcgcgatc tcgcgcgtgc gcgccgacac ggcggagtac atggtgttca
      781 atgcaccgaa cacggccgcg aggcccatca ggatcgcgat cgtccctccg acatacgtga
      841 cgagcgttac gagtgagcgc gactgagccg cgtagtactc gcgctccgtc ctcacgctca
      901 cgttcacacg cgggtcgctc gtgagtgcat ccttgaacgt cgtcagcgcg ttcgggctct
      961 cgagcctgac tcgcgtcgat tggtacgacg tgccgcggtt gtaagcgccc tggagcacaa
     1021 ccgcgtcgct ccagatctcc gactccgcga cgctgccggt gtccgcgaaa atgccgacga
     1081 cgttccaagc ctgattcccg gacttgagct ccgctccgac gtcgagcccg gcaaattgct
     1141 gggccgcgcc gcgccccacg atgacctcat tcgtgccggg ccgaaactcg cggccgtcga
     1201 tgattcggaa tccgttgcgc agttgcgcgg cttgggcgcc gacgccgcgc aacggcacgt
     1261 tcgccggtgt cccagtgctc ttcagcggga cgtcgacgag cacgtagagc tcggacgagg
     1321 cgaccgggtt gccgccgtcc tgtagcacgc cgggcgcatc ggcgatgatc cgcgtctgct
     1381 gttgcgagaa gccactcgtc atctcgtcgg tggagccgcc gcgcagcacg attgcgacgt
     1441 cgtcggcgcc cgattgctcg agcacggcgc ggaacccggc tgcgatggag aagatgccga
     1501 tcagcacggc cacgacaccc gcgatcccga cgatcgcgac gagcgacgta ccgctgcgct
     1561 cgcgaatgct acgcaggttc atggccgtga ccgcggcagc ttgtttgaac cagctcacga
     1621 ctcgactttc gaggattaag tccgacgcag ctgctcgacg atcgagagcc gccaaatctg
     1681 tgcggagggc agaaggcacg acacgacgcc gagcgccgtc gcgagcgccg cgccgctgac
     1741 gaacgtcgtc ggaggcaccg tcagcaacgg taggaacgtc gacacggata ccccgagcgc
     1801 gtcgatcgtg ccgcgcgcga gccagagccc gagggccgcg ccgacgagcg ttacgcctaa
     1861 accttccgcg agcacgagtg agacgatcag cgtgttcgag aagccgagcg tgcgcagcac
     1921 cgcgatctcg cgcactcgct cgcgcactcc ttgtgccatc gcgttcgcgg tc
//
LOCUS       DATCUD010000642         2551 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34598, whole genome shotgun sequence.
ACCESSION   DATCUD010000642 DATCUD010000000
VERSION     DATCUD010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34598"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /locus_tag="VIQ99_09290"
     CDS             complement(<1..422)
                     /locus_tag="VIQ99_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020083331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrdJb"
                     /protein_id="HEY9183382.1"
                     /translation="MAKITIDKKIVKYAVAKDEEKPKAAPAPESERAESNVIRMHEKL
                     ERPEVLIGSTYKVKTPVSDHAMYVTINDIVLNEGTEYEQRRPFEIFINSKNLDHYQWI
                     VALTRIMSAVFRKGGDVTFLVDELKAVFDPRGGYWQPGG"
     gene            complement(431..2536)
                     /locus_tag="VIQ99_09295"
     CDS             complement(431..2536)
                     /locus_tag="VIQ99_09295"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017463924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin-dependent
                     ribonucleoside-diphosphate reductase"
                     /protein_id="HEY9183383.1"
                     /translation="MALQEASLNIWDTKYRLKTKSGEPVDRDIDGTYQRVAKALAAVE
                     EPARRSEWYERFLWALQRGAIPAGRITSNAGAEYHKPATSTINCTVSGTISDSMHDIL
                     DKVHEAGLTLKAGCGIGYEFSTLRPRGAYVSGAGAYTSGPLSFMDIYDKMCFTVSSAG
                     GRRGAQMGTFDVGHPDAMDFVRAKREDGRLRQFNLSLLITDEFMQAVKDDKPWQLAFP
                     MTRREAEEENVNLDDSSRVVWRDWPTKANYVVDERGLVACRVYRTLPARRMWDVIMSS
                     TYDFAEPGFVLIDRVNEMNNNWWCEDIRATNPCGEQPLPAYGACLLGSINLTKFVVAP
                     FSEHAYFDWDEFREVVKVFTRMLDNVVDVNGLPLPQQRDEILRKRRHGMGFLGLGSAI
                     ALLGLRYGSPESIKFTEDVSRELAIAGWQEALELAKEKGPAPILIEEFDVTETMLRKR
                     PEMVADGWKVGQKIPGRILHSRYSRYMQRVRTVAPELVDQLEQHGARFTHHSSIAPTG
                     TISLSLANNASNGIEPSFAHHYFRNVIRQGKKSKEKVDVFSFELLAYRALVNPRAMPG
                     STKPGEKLPDYFVSSEDISPREHVDIQAASQKWIDSSISKTANVPTDYPYEQFKDIYL
                     YAHEQGLKGCTTFRFNPEAFQGVLVKEKDLKNTTYRFTLTDGTVVEAKGDEEIVYDGE
                     THTAANLFDALKEGYYGKL"
BASE COUNT          471 a          804 c          741 g          535 t
ORIGIN      
        1 ccgccgggct gccagtagcc accgcgcgga tcgaacacgg ccttcagctc gtcgacgagg
       61 aacgtgacgt cgccgccttt gcgaaacacg gcggacatga ttcgcgtcag cgctacgatc
      121 cattggtagt gatcgagatt cttcgaattg atgaaaatct cgaacggccg ccgctgctcg
      181 tactcggtgc cctcgttcaa aacgatgtcg ttgatcgtga cgtacatcgc gtgatccgac
      241 accggagtct tgaccttgta cgtggaaccg atcaagacct cggggcgctc gagcttctcg
      301 tgcatccgaa tcacgttgga ttccgcccgc tcggactcgg gcgcaggagc cgccttcggc
      361 ttctcctcgt ccttcgcgac ggcgtacttg acgatctttt tgtcgattgt gattttggcc
      421 atgttccgcc tcaaagcttg ccgtagtaac cctctttcag agcatcgaac aagttggcgg
      481 cggtatgagt ctcgccgtca tagacgattt cctcgtcacc cttggcttcc acgaccgtgc
      541 catcggtgag cgtgaatcga tacgtcgtgt tcttcagatc cttttctttc acgagcacac
      601 cctgaaatgc ctccggattg aagcggaacg tcgtgcagcc cttcaggcct tgctcgtggg
      661 catacaggta gatgtctttg aactgctcgt agggatagtc ggtcggcacg tttgccgtct
      721 tcgagatcga cgaatcgatc catttctgcg aggccgcttg aatatccaca tgctcgcgcg
      781 gcgagatgtc ctcggagctc acgaaatagt ccggaagctt ctcgcccggc ttggtcgacc
      841 ccggcatcgc tcgcggattc acgagcgcgc gataggccaa cagctcgaac gagaacacgt
      901 cgaccttctc cttgctcttc ttgccctggc gaatcacgtt gcggaagtag tgatgagcga
      961 acgacggctc gatcccgttg ctcgcattgt tcgcgaggga cagagatatc gtgcccgtcg
     1021 gcgcaatcga gctgtgatgc gtaaaacgcg cgccatgctg ctcgagctga tccacgagct
     1081 cgggcgcgac ggtccgcacg cgctgcatgt agcggctgta gcggctgtgc agaatacggc
     1141 ccggaatctt ctgcccgacc ttccacccgt cggcaaccat ctcgggacgc ttgcgcagca
     1201 tcgtctcggt gacgtcgaac tcctcgatca agatcggcgc ggggcctttc tctttggcga
     1261 gctcgagggc ctcctgccaa ccggcgatcg cgagctcgcg cgatacgtct tccgtgaatt
     1321 tgatcgactc cggcgaccca tagcgaagcc caagaagcgc gatcgcggag ccgagcccca
     1381 ggaatcccat gccgtggcgg cgtttgcgca agatctcgtc gcgttgctgg ggcagtggca
     1441 ggccgttcac atcgacgacg ttgtcgagca tgcgagtgaa gactttgacg acctcgcgga
     1501 attcgtccca gtcgaaataa gcatgctcgc tgaacggcgc cacgacgaac ttggtgaggt
     1561 tgatggagcc gagcaagcag gctccatacg cgggcagcgg ttgctctccg cacgggttcg
     1621 tggcgcgaat gtcttcgcac caccagttgt tgttcatctc gttgacacga tcgatcagca
     1681 cgaagccggg ctccgcgaaa tcgtacgtcg acgacatgat gacgtcccac atgcgacgcg
     1741 ccggcaaggt tcggtacacg cggcaagcca cgagcccacg ttcgtcgacg acatagttcg
     1801 ccttcgtcgg ccaatcgcgc cacacgaccc gtgacgaatc gtcgaggttc acgttctctt
     1861 cttccgcttc gcggcgggtc atcgggaacg cgagttgcca cggcttgtcg tccttcaccg
     1921 cttgcatgaa ctcatccgtg atcaaaagcg acaaattgaa ctgcctcagc cggccgtctt
     1981 cgcgctttgc acgaacgaag tccatcgcat cgggatggcc gacgtcgaac gtgcccatct
     2041 gtgccccgcg tcgtccgccg gcggaggaca cggtgaagca catcttgtcg tagatatcca
     2101 tgaacgagag cggaccggac gtataggcgc ccgcaccact cacgtatgca ccgcgcggcc
     2161 tcaaggtcga gaactcgtag ccgatcccgc agcccgcttt cagcgtgagg cccgcctcgt
     2221 gaaccttgtc gaggatgtcg tgcatcgaat ccgaaatcgt gcccgacacc gtgcaattga
     2281 tcgtcgacgt cgcgggcttg tgatactccg ccccggcgtt cgaggtgatt cggccggccg
     2341 gaatcgctcc gcgctgcaat gcccacagga accgttcgta ccactcggag cgacgcgcgg
     2401 gctcctcgac cgccgccagc gctttggcca cacgctggta ggtaccgtcg atgtcgcgat
     2461 cgacgggctc gccggacttc gtcttcaggc gatacttcgt gtcccaaatg ttcagcgatg
     2521 cttcctgcag agcaatgtcc gcgagccgcg t
//
LOCUS       DATCUD010000643         3277 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41725, whole genome shotgun sequence.
ACCESSION   DATCUD010000643 DATCUD010000000
VERSION     DATCUD010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3277
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41725"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..328
                     /locus_tag="VIQ99_09300"
     CDS             <1..328
                     /locus_tag="VIQ99_09300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183384.1"
                     /translation="AVAVGSTYSAAACEAPAPVAIPDGKTSTMDQMLAGQAEVKAYQA
                     AMTEFLACIDAETAAQGETAPEEFKSLMIARHNAAVAEMEGVAAAFNDQIKAYRAANP
                     PAAPAN"
     gene            complement(378..605)
                     /locus_tag="VIQ99_09305"
     CDS             complement(378..605)
                     /locus_tag="VIQ99_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183385.1"
                     /translation="MHAFEFALALIALVFLFKLLNTMMLRKGAMRRRDEQADAELLER
                     LNQVEERVRVLERIVTDDRFDLKQQFRDLGS"
     gene            complement(651..1049)
                     /gene="pspC"
                     /locus_tag="VIQ99_09310"
     CDS             complement(651..1049)
                     /gene="pspC"
                     /locus_tag="VIQ99_09310"
                     /inference="COORDINATES: protein motif:HMM:TIGR02978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HEY9183386.1"
                     /translation="MNENYRDPGLINKLYRNPRRGMIFGVCAGIAEYFGFDVTVTRVV
                     VAIGALFAFPMICGAYVVLAFLLPAKRYTGTERDTVDPVERQVRASPHDTLASVRYRF
                     RDLDARLQRLEKYVTSNRYRLDREFRRLEE"
     gene            complement(1096..1329)
                     /gene="pspB"
                     /locus_tag="VIQ99_09315"
     CDS             complement(1096..1329)
                     /gene="pspB"
                     /locus_tag="VIQ99_09315"
                     /inference="COORDINATES: protein motif:HMM:TIGR02976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009271 - phage shock [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HEY9183387.1"
                     /translation="MPTTTAFFILSVILLTVVLPFIVIMHYMTKWKATKGLSEDEQRM
                     LEDLWKEGQAMQSRVNALETILDNENPDWRKKQ"
     gene            complement(1338..2024)
                     /gene="pspA"
                     /locus_tag="VIQ99_09320"
     CDS             complement(1338..2024)
                     /gene="pspA"
                     /locus_tag="VIQ99_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019674794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HEY9183388.1"
                     /translation="MGIFSRFTDIVNSNLNSILDKAEDPEKLVRLMIQEMEDTLVEVR
                     STAARAIADRKEITRSLSGLDLEARDWQAKAELALDKNRDDLAKAALAEKARAVAAAD
                     ALRVQHHALGEGLDKLNDDIVRLEEKLVDAKTRQQAIISRQRTASRRLEARKRLHSAR
                     IDDALIRFDQFERRIDDIEAHVESYDLGSTKGLKDEFSELENEDAVAKELRELKSKRA
                     EQKREGKESA"
     gene            2199..3245
                     /gene="pspF"
                     /locus_tag="VIQ99_09325"
     CDS             2199..3245
                     /gene="pspF"
                     /locus_tag="VIQ99_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012567676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HEY9183389.1"
                     /translation="MASVPAATPPQSTGLIGEAPAFVAMLEHVSRAAKLVKPVLVIGE
                     RGTGKELIAARLHYLSPRWEQPLIKVNCAALTESLLESELFGHQAGAFTGATRTHIGR
                     FEQANGGTLVLDELGTIPLRMQEKILRVIEYGEFQRVGGSDTLTTDVRIVGATNEHLP
                     RLAEVGRFRADLLDRLAFDVIHVPPLRARPEDIGTLAYHFAVNVTKELRRPFFPGFTA
                     DAKAALLAYAWPGNVRELKNAIERSVYRADAPDQPIGRILFDPFASPFAPTPTEPSEP
                     VESAPAATSEHPVPADFRAAVANFERQVLRRALERAQFKQTVAAKLLGLSYHQFRSLL
                     RKHGLAKQGSDNDD"
BASE COUNT          586 a         1091 c          982 g          618 t
ORIGIN      
        1 cgcggtcgcg gtcggttcga cttattcggc tgccgcgtgc gaggccccgg ctccggtcgc
       61 catccccgac ggtaagacct ccacgatgga ccaaatgctc gcggggcaag ccgaggtcaa
      121 agcctatcag gccgcgatga ccgagtttct cgcttgcatc gatgccgaaa cagccgcgca
      181 aggcgaaacg gcgcccgagg aattcaagtc gctgatgatc gcgcgccaca atgcggcggt
      241 cgccgagatg gaaggcgtcg ccgccgcctt caacgaccag atcaaagcct atcgcgcggc
      301 gaatccgccg gcggctcccg cgaactgaag cacgacgctg aatgagggcg cggcgcccgg
      361 cgggagccgc gcgcgcttca ggaacccaga tccctgaatt gttgcttgag gtcgaatcgg
      421 tcgtcggtga cgatccgctc cagcacgcgc acacgctcct cgacctgatt gagccgctcg
      481 agaagctcgg cgtcggcttg ctcgtcgcga cgccgcatcg ctcccttgcg cagcatcatc
      541 gtgttcaaga gcttgaatag gaaaaccagc gctatcaacg ctagcgcgaa ttcgaacgcg
      601 tgcattcctg gcggacctcc ccgtctacga caacgaccgc gatacggtct ctactcttcc
      661 agcctgcgaa actctcggtc caatctgtaa cggttcgacg tcacgtattt ctcgagccgc
      721 tgcaggcgcg cgtcgaggtc gcggaagcga tatcgcacgc tcgcgagcgt atcgtgcggg
      781 ctcgctcgaa cctggcgttc caccgggtcg accgtgtcac gctccgttcc ggtgtaccgc
      841 ttcgccggca gcagaaatgc aagcacgaca tacgcaccgc agatcatagg gaaagcaaat
      901 agcgcgccaa tcgcgacgac gacacgtgta accgtgacgt cgaagccgaa atattccgcg
      961 ataccggcac agacaccgaa gatcattcca cggcgcggat tgcggtagag cttgttgatg
     1021 agccccgggt cgcgatagtt ttcgttcatc gcgatcccgc cgtcccgagc ggctcaccga
     1081 tacgtgtcat cacggtcatt gcttctttct ccagtcggga ttctcgttgt cgagaatcgt
     1141 ctcgagcgcg ttgacgcgac tctgcatggc ctggccttcc ttccacagat cctcgagcat
     1201 ccgttgctcg tcctcggaca ggcccttcgt cgccttccat ttcgtcatgt agtgcatgat
     1261 cacgatgaac ggcaggacca ccgtcagcag aatgacggaa aggatgaaaa acgccgtcgt
     1321 cgttggcata tggagtccta agccgactct ttgccttcac gcttctgctc cgcacgcttc
     1381 gacttcagct ctcgcagctc cttcgcgaca gcgtcttcgt tctcgagctc cgagaactcg
     1441 tccttcaagc ctttggtgct gccgaggtca tacgactcga catgcgcctc gatgtcgtcg
     1501 atgcgacgct cgaactggtc gaagcggatc agcgcatcgt cgatgcgcgc gctgtgtagg
     1561 cgcttgcgcg cctcgagccg acggctcgcc gtgcgttgtc gggaaatgat cgcttgctgc
     1621 cgcgtcttgg catcgacgag cttttcctcg agacgcacga tgtcgtcgtt gagcttgtcg
     1681 aggccttcgc cgagcgcgtg gtgctgcaca cgcagcgcat cggccgccgc gacggcccgt
     1741 gccttctcgg ccagcgctgc cttcgcgaga tcgtcgcgat tcttgtcgag cgcgagctcc
     1801 gccttggctt gccaatcgcg cgcctcgaga tcgaggccgc tcagagagcg agtgatttcc
     1861 ttgcgatccg cgatcgcgcg cgcggcggtc gaacgcacct cgacgagcgt gtcctccatc
     1921 tcctgaatca tcaaacgaac gagcttttcc ggatcctcgg ccttgtcgag gatcgagttc
     1981 aggttcgagt tcacgatgtc ggtgaaacga gaaaagatac ccatggccgg tcctctgtct
     2041 gtggttgcaa ccggcaaagc agaatccgtg ccagcccacg ggatcccggc aagtcgttga
     2101 ctcgaatatg gttctcggag tccgggcatc cctgccgctt gggtaccgtt tcgccgatag
     2161 gctaagattt cgtctaaaca accaactctt ggtgcccttt ggccagcgta cccgccgcga
     2221 cccctccgca gagcaccgga ctcatcggcg aagcaccggc cttcgtagcc atgctcgagc
     2281 acgtttcgcg agcggcaaag ctcgtcaagc cagtgctcgt gatcggcgag cgcggcaccg
     2341 gcaaggaact gatcgcggct cggcttcatt atctttcgcc gcggtgggag cagccgctga
     2401 tcaaggtcaa ctgcgccgcg ttgacggaga gcttgctcga gtcggagctg ttcggtcatc
     2461 aagccggcgc attcacgggc gcgacgcgca cgcacatcgg gcgattcgag caggccaacg
     2521 gcggcacgct agtgctcgac gagctcggca cgatcccgct gcgcatgcag gagaaaatcc
     2581 tgcgcgtgat cgagtacggc gaatttcaac gcgtaggcgg ctcggacacg ttgacgaccg
     2641 atgtgcgcat cgtcggcgcc acgaacgagc acctgccgcg gctcgccgag gtcgggcggt
     2701 ttcgggccga tctgctcgac cgcctcgcgt tcgacgtgat ccacgtgccg ccgctgcgcg
     2761 cgcggcccga agacatcggc acgctcgcgt accatttcgc cgtgaacgtc acgaaggagc
     2821 tgcgccggcc gttcttcccc ggctttacgg ccgatgcgaa agccgcgctg ctcgcgtacg
     2881 cctggcccgg caatgtgcgc gagctcaaga acgcgatcga gcgcagcgtg tatcgcgccg
     2941 atgcacccga tcagcccatc ggccgaatcc tgttcgaccc gttcgcgtca cctttcgccc
     3001 cgacgcccac agagccttcg gaaccggtgg agtcggcgcc ggccgcgacg tcggagcatc
     3061 cggttccggc cgacttccgc gccgcggtcg cgaacttcga gcgacaggtc cttcgccgag
     3121 cgctcgagcg cgcgcaattc aagcaaacgg tcgcggccaa gctgctcggc ctctcttatc
     3181 accaatttcg cagcttgctc cgcaagcacg ggctggcgaa gcaaggctca gacaacgacg
     3241 actgagccgc agccgtgccg cctgccgctc cggacct
//
LOCUS       DATCUD010000644         5299 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62666, whole genome shotgun sequence.
ACCESSION   DATCUD010000644 DATCUD010000000
VERSION     DATCUD010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5299
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62666"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..2788)
                     /locus_tag="VIQ99_09330"
     CDS             complement(29..2788)
                     /locus_tag="VIQ99_09330"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEY9183390.1"
                     /translation="MKKDYRPAEIEAHHYARWEAAGYFAPAGNGEPYCIVIPPPNVTG
                     TLHMGHALQDTIMDALTRYHRMRGFRTLWQPGTDHAGIATQMVVERLLNREGTDRHKL
                     GRERFVERVWQWKERSGNTISQQLRRLGASVDWTRDRFTMDEGLSRAVTEVFVRLHDE
                     GLIYRGKRLVNWDPVLQTALSDLEVLSTEERGKLWHLRYPVVGAPGAHLVVATTRPET
                     MLGDTAVAVHPDDERYKPLIGKRVALPLTDRQIPIIADEYVDPEFGTGCVKITPAHDF
                     NDYEVGQRHNLPMVSVLNEHAALNDNAPPAYRGLDRFAARKRIVADLEAQGLLDAITD
                     HTSMIPKGDRSGVVVEPLLTDQWYVRAKPLAEPAIAAVEEGRVRFVPENWSKTYFEWM
                     HNIQDWCISRQLWWGHRIPAWYDDAGNIYVGRDEADVRRKHHLPANLSLRQDEDVLDT
                     WFSSALWPFSTLGWPDDTAELRTFYPTNVLVTSFDIIFFWVARMLMMGLKFIGDVPFR
                     EVYIHALVRDHEGNKMSKSKGNILDPLDLIDGVDLDTLLKKRTDGLMQTHLQAGIEKA
                     TRKEFPNGIEGVGTDALRFTFASLATTGRDARFDLARAEGYHRFCNKLWNASAYVLSQ
                     LDGIDDGPAALGTADRWIRSRLDATIASVHEDFAVYRLDLIAQTLYDFAWYELCDWYL
                     ELTKAVLTDPAADPALRRGAQRTLVEVLGSLLKLLHPLMPFVTEELWLEIAKKRGIES
                     ATIMLEPFPRQGDFEADAAAEDEIAWLKGFVGGIRQIRGEANLPRTATLRVQLADATP
                     LDRQRVERHASHLRKLAGLEHVEFLAPGARVKGAATALLGALRILVPLAGLIDVAAER
                     DRLGKQLAKTADDLGKVRRKLENQSFVANAPAEIVAKENTRIAELTQRTQQLEQQLAR
                     LAELT"
     gene            complement(2796..3071)
                     /locus_tag="VIQ99_09335"
     CDS             complement(2796..3071)
                     /locus_tag="VIQ99_09335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183391.1"
                     /translation="MSSSPPLERNIPTLTEIIRTANPTPADVETLLAEVQTKLASRTF
                     QLADTLLRSAFAEMEASLFEQISSRLRRELPDLIDATLREHFDTHNG"
     gene            complement(3076..3510)
                     /locus_tag="VIQ99_09340"
     CDS             complement(3076..3510)
                     /locus_tag="VIQ99_09340"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007233898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEY9183392.1"
                     /translation="MTQVDFYVLDSDSDDARLRLACKIVDKATQLDNHVFINATSEEE
                     ARQLDELLWTFSQGSFIPHRVYRDEISEAPREPVLIGVNRPPAPGRWDVMINLAAEVP
                     DFFSRYERVAEVVDANATRREQSRERYRFYRDRGYKLNTHQV"
     gene            complement(3507..4997)
                     /locus_tag="VIQ99_09345"
     CDS             complement(3507..4997)
                     /locus_tag="VIQ99_09345"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008062070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEY9183393.1"
                     /translation="MEFPVKADRPARIRTECAILPLFDDSALHGPTADFDRASRGAIR
                     KLVRGGDALARLGTTTLVHRPQGGAAARWLLVGCGKRSDFNAKKLNVALAAAINALRS
                     GGTKEATSFLGYEARAALNPTDAARHSVETTRASVYRFDELKSRTDPPSRLTRLGLAY
                     PKGTSTTGIRAGIKVGNAIADGSDLARDLGNRPPNVCTPSHLADAARTIAKRNARMEA
                     KVLDEADMRKLGMGALLSVTQGAAEPPRLIVLHYRGAGTKEAPIALCGKGVTFDTGGI
                     SIKPAAKMDEMKFDMCGAGGVLGAMSAIGELQPTLNVVAVIPACENMPGSRATRPGDI
                     VKSMSGQTIEIINTDAEGRLILCDAITFAKRFKPRCIVDVATLTGACVIALGHVYAGL
                     FCNDEALAKELLAASDRSLDLAWRMPVHDEYGETLRSNFADFANSGTRDGGASIGANF
                     LSRFVDGLPWAHLDIAGVAWRANANKGATGRPVPLLVDFLLNAAGQ"
BASE COUNT          893 a         1678 c         1725 g         1003 t
ORIGIN      
        1 cacaaaggcg gcgccgagag acgaaagcct aggtgagctc ggcgaggcgg gcgagctgtt
       61 gctcgagctg ctgcgtgcgc tgtgtgagct cggcgattcg cgtgttttct tttgcgacga
      121 tctcggccgg cgcattcgcc acgaagctct ggttctcgag cttccggcgc accttgccga
      181 ggtcgtcggc ggtcttcgcg agctgcttgc cgaggcggtc tcgctcggcc gcgacgtcga
      241 tgagcccggc aagtggcacc agaattcgca atgccccgag cagcgccgtg gcggcgccct
      301 tgacgcgcgc gcccggcgcc aggaattcga cgtgctcgag gccggccagc ttgcgcaggt
      361 gactcgcgtg ccgctcgacg cgctggcggt cgagtggagt ggcatcggcc aactgcacgc
      421 gaagcgtcgc cgtgcggggt agattcgcct cgccgcgaat ctggcgaatg ccgcccacga
      481 agcctttgag ccacgcgatc tcgtcctcgg ctgccgcatc ggcttcgaaa tcaccctgcc
      541 gcggaaaggg ctcgagcatg atcgttgcgc tctcgatacc gcgttttttc gcgatctcga
      601 gccacagctc ctcggtcacg aacggcatca gcggatgcag cagcttcaac aggctgccga
      661 gcacctccac gagcgtgcgt tgcgcgccgc gccgaagcgc tgggtctgcg gccggatcgg
      721 tcaacacggc cttcgtgagc tcgaggtacc agtcgcagag ctcgtaccaa gcgaagtcgt
      781 acaacgtctg cgcgatgagg tcgaggcggt agaccgcgaa atcctcgtgc accgaggcga
      841 tcgtcgcgtc gagacgcgag cgaatccaac gatccgcagt gccgagcgcc gcggggccat
      901 cgtcgatgcc gtcgagttgg ctcaggacat acgcagatgc attccacagc ttgttgcaaa
      961 aacggtgata gccctcggcg cgtgcgagat cgaagcgcgc atcgcggccc gtcgtcgcca
     1021 aagacgcgaa cgtgaagcgc aacgcgtcgg ttccgacgcc ctcgatgccg ttcgggaact
     1081 ccttgcgcgt ggccttctcg atgccggcct gcaagtgcgt ctgcatgagg ccgtccgtgc
     1141 gcttcttcag caacgtgtcc agatcgacgc cgtcgatgag atcgagcggg tccaagatgt
     1201 tgcccttcga cttcgacatc ttgttgccct cgtggtcgcg cacgagcgca tggatgtaga
     1261 cctcgcgaaa cggcacgtcg ccgatgaact tgagccccat catcagcatc cgcgcgaccc
     1321 agaagaagat gatgtcgaag ctcgtgacga ggacgttggt cggatagaac gtgcgcagct
     1381 ccgcggtatc gtcgggccag cccagcgtcg agaacggcca gagcgccgac gagaaccagg
     1441 tgtcgagcac atcctcgtcc tgacgcagcg agagattcgc ggggagatgg tgcttccgtc
     1501 gaacgtccgc ttcgtcgcga ccgacataga tgttgccggc gtcgtcgtac caggcgggaa
     1561 tccgatgtcc ccaccacagc tgccgcgaga tgcaccagtc ctgaatgttg tgcatccact
     1621 cgaaataagt cttgctccag ttctccggca cgaagcgcac tcggccttcc tcgacggccg
     1681 cgatggccgg ctcggccagc ggcttcgcgc gcacgtacca ctgatcggtc agcagcggct
     1741 cgacgaccac accgctgcgg tcacctttcg gaatcatcga agtgtgatcg gtaatggcgt
     1801 cgagcaggcc ttgcgcctcg agatccgcaa cgatgcgctt gcgcgccgcg aaccggtcga
     1861 ggccgcgata agccggcggt gcgttgtcgt tcaatgccgc gtgctcgttg agcaccgaca
     1921 ccatcggcaa gttgtggcgc tggccgactt catagtcgtt gaagtcgtgt gccggcgtga
     1981 tcttgacgca gcctgtgccg aactcggggt cgacgtactc gtcggcaatg atcgggatct
     2041 ggcggtccgt aagcggcagt gccacgcgct tgccgatcag aggcttgtac cgttcgtcgt
     2101 cggggtgcac agccaccgcg gtgtcgccga gcatcgtctc cggccgtgtc gtggcgacga
     2161 cgaggtgtgc gcccggagcg ccgaccacgg gataacgtaa atgccacagc ttgccgcgct
     2221 cctcggtgct gagcacctcg aggtccgaca gtgccgtttg caggaccgga tcccaattga
     2281 cgagacgctt gccgcgatag atcaaaccct cgtcgtggag gcgaacgaat acctcggtca
     2341 ccgcgcgcga caaaccttcg tccatcgtga agcggtcgcg agtccaatcg accgaagcgc
     2401 cgagccgccg cagttgttgc gagatcgtgt tgccggaacg ctccttccat tgccagacgc
     2461 gctcgacgaa acgctctcgg cccagcttgt gccgatccgt tccttctcga ttcagcagcc
     2521 gctccacgac catctgcgtg gcaatgcccg cgtggtcggt accgggctgc cacagagtgc
     2581 gaaacccccg catgcggtga taacgcgtca gcgcgtccat gatcgtgtct tggagtgcat
     2641 ggcccatgtg cagcgtgccc gtcacgttcg gcggcggaat cacgatgcag tagggctcgc
     2701 cgttgccggc cggagcgaaa tagcccgctg cttcccagcg cgcgtagtgg tgtgcctcga
     2761 tctcggcggg gcggtagtct ttcttcacga tcgcgctagc cgttatgcgt gtcgaagtgc
     2821 tcacgcagcg tggcgtcgat gaggtccggc agctcgcggc ggagccgact cgagatctgc
     2881 tcgaacagcg acgcttccat ctccgcgaac gccgaacgaa gcaaggtgtc cgccagctgg
     2941 aatgtgcgtg atgcgagctt ggtctgcact tctgcgagca gcgtttcgac gtcggccgga
     3001 gtcgggtttg ccgtgcggat gatctccgtc agcgtcggga tgttccgttc gagcggtggg
     3061 gatgacgaca tcgattcaga cctgatgagt gttgagcttg tagccgcggt cgcggtagaa
     3121 acggtagcgc tcgcgacttt gctcgcggcg cgtggcgttg gcatcgacga cctcggcgac
     3181 acgctcatag cggctgaaaa aatcgggcac ctcggcggcg aggttgatca tcacgtccca
     3241 gcgtccgggg gcgggcggac gattcacgcc gatcagcacg ggctcgcgcg gcgcctccga
     3301 tatctcgtcg cggtagacgc ggtgggggat gaagctaccc tgcgagaaag tccacaagag
     3361 ctcgtcgagt tgtctcgcct cctcttcgga cgtggcattg atgaagacat gattgtcgag
     3421 ctgcgtggcc ttgtcgacga tcttgcacgc aagccgtagc cgcgcgtcgt cggaatcgct
     3481 gtcgagaacg tagaagtcga cctgcgtcac tgcccggccg cgttcagcag aaaatcgacc
     3541 agcagcggca cgggcctgcc cgtcgcgccc ttattcgcat tcgcgcgcca ggcgaccccg
     3601 gcgatgtcga gatgcgccca cggtaacccg tctacgaatc gtgacaagaa gttcgcgccg
     3661 atgctggcgc cgccgtcgcg cgtgccggag ttcgcgaaat cggcgaagtt gctgcgcagc
     3721 gtctcgccgt actcgtcatg gacgggcatt cgccacgcga gatccaacga tcggtccgac
     3781 gccgcgagca gctctttcgc gagcgcctcg tcgttgcaga atagtcccgc atacacgtgg
     3841 ccgagcgcga tcacgcaggc gccggtcagt gtcgcgacat cgacgatgca gcgcggtttg
     3901 aatcgcttcg caaacgtgat cgcgtcgcaa aggatcagcc gaccctcggc atcggtattg
     3961 atgatctcga tggtctggcc ggacatgctc ttcacgatgt cgccgggacg agtcgcgcgg
     4021 ctgccgggca tgttttcgca ggccgggatc acggcgacga cgttcaaggt gggttggagc
     4081 tcgccgatag cgctcattgc gccgagcacg cccccggcac cgcacatgtc gaacttcatc
     4141 tcgtccatct tggccgcggg tttgatcgag attccgccgg tatcgaaggt cacgcccttg
     4201 ccgcacagcg cgatcggcgc ttccttggtg ccggcacctc gatagtgcag cacgatcaag
     4261 cgaggcggct cggcggcgcc ttgggtcacg gacagcagcg cacccatccc gagcttacgc
     4321 atgtccgcct cgtcgagcac tttcgcctcc atgcgcgcgt tgcgcttcgc tatcgtgcgc
     4381 gccgcgtcgg cgaggtgcga cggcgtgcag acattgggtg gtcggttgcc gaggtcgcgt
     4441 gcgaggtcgc tgccgtccgc gatcgcgttg cccaccttga tgccggcgcg gatgccggtc
     4501 gtgctcgtgc cctttgggta ggcgaggccc agacgggtca gccgcgacgg cgggtcggtg
     4561 cggctcttga gctcatcgaa gcgatagacg cttgcgcgcg tagtctcgac gctgtgtcgt
     4621 gccgcgtcgg tcgggttcaa cgccgcccgg gcttcatagc ccaagaagct cgtcgcttcc
     4681 ttcgtgccgc cacttcggag cgcattgatc gcggctgcca acgcgacatt gagcttcttc
     4741 gcgttgaaat cgctgcgttt gccgcagccg acgagcagcc atcgagctgc agcaccaccc
     4801 tgtggacgat ggaccagggt cgtcgtgccg aggcgcgcaa gtgcgtcgcc gccgcggacc
     4861 aacttcctga ttgcgcctcg tgatgcccta tcgaaatcag ctgtggggcc gtgcaaagcg
     4921 gaatcgtcga acaagggcag aatcgcgcac tccgtacgaa tccgtgcggg ccgatccgct
     4981 ttgacgggaa actccatgct atctccttcg ttacgccgca cggcagcgtc ggggcaccgc
     5041 tatcgcgcgt cgctgcagtg cagccgcgct gtgctatcgt ggcggaatac cgtggaaaaa
     5101 ccgcagttta gttcattcga ctcgttgaag gtactgggca ccggaccgac accgtgaatc
     5161 tgattggccg ctacatcttc cgtgaagcat tcggttcttg gttgatggtc atggcggtgc
     5221 tgttcatgat cttcatgacg aatcagctcg ccgatattct cggcgatgcg gcggccgagc
     5281 ggttgccgcg agaggccgt
//
LOCUS       DATCUD010000645         2401 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_27502, whole genome shotgun sequence.
ACCESSION   DATCUD010000645 DATCUD010000000
VERSION     DATCUD010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2401)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2401)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2401
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27502"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..1508)
                     /locus_tag="VIQ99_09350"
     CDS             complement(15..1508)
                     /locus_tag="VIQ99_09350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183394.1"
                     /translation="MYTTKMRRCLLAAAVTTTLVGTAQAQRSNDSIRGAPSEANHFIE
                     TPRGWQHPKTPWGEPDIQAQLNMMQAAGIPLERCANSYRAALPPGAAPPAGPAGGVGA
                     PAPACDMNKKWLTDEEFAARMEQFRNRVDASRQFAEQGNLGRAMMTGLTDPNIPQRQT
                     NLIVDPPNGLLPPLTPEGKRRARLAKSDWALPGETLTFDGPQDFDSWDRCITRGMPSS
                     MMPYRYNGGFAIRQAPGYVIFDLEMIHESRVIPTDGRPALPSEIKQWMGESRGRWEGN
                     TLVVETTNFQEGPPLINLAVVGSPPGNRFPHSDQMKTTERIVRLNDDTWLYEITTEDP
                     VILTGPFTVRYPMRHDPTYLTPEYACHEDNTIVRNYTNTSRHERANPTPEPPQPPVQV
                     DAGVATALAGRWVGRPRIATIDVDIELEFTRNADGTVNGKLIGTNLGPIDRPLRQFTI
                     ADGVVYFTLPNVDPWRFSGQLGDGTITGVVASSQGGVPVTFRKQTGR"
     gene            1788..>2401
                     /locus_tag="VIQ99_09355"
     CDS             1788..>2401
                     /locus_tag="VIQ99_09355"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9183395.1"
                     /translation="MRRINVSVIAGVIALNGVDAGAAVAPTWNRDFAAPILWQRVTAF
                     GHLVVATDDGLFAVDADTGEVRWSHPDLGGLVGDSFDELEGSPLVVIDSAKGIASRRT
                     VVLDVFTGTVVLDSRAQNLADVVSTHVLPRSGSLLIAGFEHNNPQPRLHLYDIDDGQR
                     LWASDAINYTATVPGMANMGQGLQALMTKMMNAALVATGETPVR"
BASE COUNT          362 a          787 c          798 g          454 t
ORIGIN      
        1 tttcttcatt gtgattacct gcccgtttgt ttgcggaacg taaccggcac accgccctgc
       61 gagctcgcca cgacgccggt gatcgttccg tctccgagct gacccgaaaa gcgccacgga
      121 tcgacgttcg gcagcgtgaa gtacacgacg ccatcggcaa tcgtgaactg acgcaacggc
      181 cggtcgatgg ggcccaagtt cgtgccgatc agcttgccgt tcacggtgcc gtctgcgttt
      241 cgcgtgaact cgagctcgat gtcgacgtcg atcgtcgcga tgcgcggtcg tccgacccag
      301 cggcccgcga gtgcggttgc gacgccggcg tcgacttgga ccggtggctg cggcggctcc
      361 ggcgtcggat tcgcgcgttc gtgccggctc gtgttcgtgt agttgcggac gatcgtgttg
      421 tcttcgtgac aggcatattc cggcgtgagg tacgtcggat cgtgacgcat cggatagcgg
      481 accgtgaacg gccccgtgag gatcacggga tcttcggtcg tgatctcgta cagccacgta
      541 tcgtcgttca agcgcacgat gcgctcggtc gtcttcatct ggtcgctgtg cgggaagcgg
      601 ttaccgggtg gcgagccgac gacggcgagg ttgatcagcg gcggcccttc ttggaagttc
      661 gtcgtctcaa cgacgagcgt gttgccttcc caacggccac gcgattcgcc catccattgc
      721 ttgatctcgg acggcagcgc gggccgcccg tcggtcggga tcacgcgtga ctcgtggatc
      781 atctcgagat cgaagatcac gtagcccggc gcctgccgga tcgcgaagcc gccgttgtat
      841 cgatacggca tcatcgatga cggcatgccg cgcgtgatgc agcgatccca gctgtcgaag
      901 tcctgcggtc cgtcgaacgt cagcgtctcg cccggcaacg cccagtcgct cttcgcgagc
      961 cgtgcgcggc gcttgccctc gggggtcaac ggcggcaaca ggccgttcgg cggatcgacg
     1021 atcaggttcg tctgccgctg cgggatgttc ggatccgtga ggccggtcat catcgctcga
     1081 cccaggttgc cctgctccgc gaactggcgg ctcgcatcca cgcggttgcg gaattgctcc
     1141 atgcgcgccg cgaactcttc atccgtgagc catttcttgt tcatgtcaca cgccggcgcg
     1201 ggcgctccga cgccacccgc gggacccgcc ggcggagccg cacccggcgg cagcgcagcg
     1261 cggtagctgt tcgcgcaccg ctcgagcggg ataccggcag cctgcatcat gttcagctga
     1321 gcctggatgt ccggctctcc ccacggcgtc ttcggatgct gccagccgcg cggcgtctcg
     1381 atgaaatgat tcgcctcgct cggcgcgcca cgaatggagt cgttgctcct ctgagcctga
     1441 gccgtcccga cgagcgtcgt ggtcacggcc gcggccaaca ggcagcgccg catcttagtc
     1501 gtgtacatgg tcgttccccc gtgcctcagc gagatctcga atagacagta aagtacctgt
     1561 cgcgccgcgt gacgtccatc ggctgccggc ctactgactg cgctcgagct cgctcgaaca
     1621 ggttcaggat cgtgtcgaac gcgcttggag cctcgggcgc cgcgctctgc gcagacgtcg
     1681 gctcatgggc tcctgagtca tgtccgcccg ccaactgtga tcgcggtcgc ggacggcaag
     1741 ccgcggctgg gcgacgcttc cggcgagcca aggcgaggga tgccgctatg cgccgtatta
     1801 atgtgtccgt gatcgccggc gtgattgcgc tcaatggtgt cgatgccggc gctgcggtcg
     1861 cgcccacctg gaaccgcgac ttcgccgcgc cgatcctgtg gcagcgcgtg acggccttcg
     1921 gtcacttggt cgtcgccacc gacgatggac tgttcgcggt cgacgccgac accggcgagg
     1981 tgcggtggtc acacccggac ttgggcggcc tcgtcggcga cagtttcgac gagctcgagg
     2041 gctcgcctct ggtcgtgatc gacagcgcca agggcatcgc gagccggcgg accgtggtcc
     2101 tcgacgtctt cacgggcacg gtcgtgctcg actcgcgagc acagaacctc gccgatgtcg
     2161 tgtcgacgca cgtgctgccg cggagcggca gcctgttgat agccgggttc gagcacaaca
     2221 acccgcagcc gcgcttgcac ttgtacgaca tcgacgatgg ccagcgcctg tgggccagcg
     2281 acgcaatcaa ctatacggcg acggtgcccg gcatggccaa catgggccaa ggcttgcagg
     2341 cgttgatgac gaagatgatg aacgcggctc tcgtcgcgac cggtgagacg ccggtgcgca
     2401 g
//
LOCUS       DATCUD010000646         3998 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98791, whole genome shotgun sequence.
ACCESSION   DATCUD010000646 DATCUD010000000
VERSION     DATCUD010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3998
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98791"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VIQ99_09360"
     CDS             complement(<1..510)
                     /locus_tag="VIQ99_09360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEY9183396.1"
                     /translation="MDNPGLPLRIVSAIWRGLDHLRRLLHLILLLGIFLLLLASLFSG
                     AVLVPSSAALVIAPQGTLVDQLTGDALSRAIARAQGVTAQETLVRDVLDALRAARDDE
                     RIKAVVLDLDELTGAGLSKLQEVASEIDRFKESGKPVIATGDGFTRDQYYLAARADTI
                     YMHPQGLVLI"
     gene            complement(534..1796)
                     /locus_tag="VIQ99_09365"
     CDS             complement(534..1796)
                     /locus_tag="VIQ99_09365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005963234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY9183397.1"
                     /translation="MSFAVAALLIVITLLGAPLFAVIGAGAFVGFEREGVDLSVVAIE
                     FFGLSETPVLVAIPLFTFAGFLLSAGQAPRRLVRLSQALLGWFPGGLAVISLVACALF
                     TAFTGASGVTIIALGALLFPALTQAGYEERFNLGLITASGSLGLLFAPSLPLILYGVV
                     SEAPIDDLFVAGVLPGTLMIVLLSLYSYWRNRKVRYVVTERSWSEAWAAIVAARWDLP
                     LPVVVLAGIYSGYFAVSEAAVVTALYVVIVEILILREVPWRDVPRIMRESTVLVGAIL
                     AILGVSLASTNLMIDTGVPQRLFEFVSEYVQGPTTFLLVLLLFLLVLGAILDIFSAIV
                     LIVPLLLPIAAQYGIDPIHLGIVFLAAMELGYLTPPVGLNLFIASHRFEKDITEIYLA
                     TQPFLLVSLLAVVIIAFWPDLSLVLLGR"
     gene            complement(1793..2266)
                     /locus_tag="VIQ99_09370"
     CDS             complement(1793..2266)
                     /locus_tag="VIQ99_09370"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY9183398.1"
                     /translation="MARAVETWLVVVVLGGLILFGAVQILLRNVFSISFAWGDGLTRL
                     AVLWLGLLGALAASRDGRHITMGAVGRLLPQRLQVFALVTADLFAAVVSAALAWYSWI
                     FVSDSREFGDVLLDGVPAWWLQAIMPVAFALMTCQFLAHGILRLRGMGAAPVPHL"
     gene            complement(2315..3355)
                     /gene="dctP"
                     /locus_tag="VIQ99_09375"
     CDS             complement(2315..3355)
                     /gene="dctP"
                     /locus_tag="VIQ99_09375"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY9183399.1"
                     /translation="MGKGRTPLIRFSATIAIAAWFSISALAAYAVDIKIATVAPDGSR
                     WMQHMRAGAEEVRMQTAGRVVIKFYPGGVMGNDAQVLRKVRIGQLQGGAFTAGGLGER
                     YGGLNLYGIPLLFRSLDEIDAVRATLDAELIRGLDQAGFVAFGFIEGGFAKLLSNEPI
                     QTVDDLRRKKVWVPEGDAISFLAMETMGLSPTVLPVTDVLTGLQTGLIEVAFASPVAA
                     LVLQWHTKVKYITELPISYSMGVFAIEKNAFLALGAQDQQIVREVMQRYINDLDREAR
                     DDNLKAAEVLARSGIEAVNVNAADVDGWRRTIEGLFPKVRERPDIDAPVFDRLLAMLA
                     EYRRTYPELARQ"
     gene            complement(3355..>3998)
                     /locus_tag="VIQ99_09380"
     CDS             complement(3355..>3998)
                     /locus_tag="VIQ99_09380"
                     /inference="COORDINATES: protein motif:HMM:NF028121.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter TatT component family protein"
                     /protein_id="HEY9183400.1"
                     /translation="LLSAGAQLFALYGSRFAASERAPTLTGKARRYGERAICLAHEAA
                     CSWAGEDYTTFVMDLGAVGKRDIGPLYSYAVSWLSHLDATSEDWTAVAELPWVEAVLE
                     RTLALDETYENGAVHGYLGILNSLRPPALGGKPDVARAHFERAIELSEGRDLSIKVEY
                     ARRYARLVFDQELHDRLLTDVISAPVEAPRYTLFNVLAKQEAQGLLATSKEYF"
BASE COUNT          856 a         1346 c         1203 g          593 t
ORIGIN      
        1 gatcaagacg agtccctgcg gatgcatgta gatggtatcc gcgcgagccg cgaggtagta
       61 ctggtcgcgc gtgaacccat cacccgtcgc gatgacgggc ttcccgcttt ccttgaatcg
      121 atcgatctcg ctcgccacct cctgaagctt gctgaggccg gcacccgtca actcgtcgag
      181 gtcgagcacg acggccttga tgcgttcatc gtcccgcgcg gcgcgcagcg catcgaggac
      241 atcgcggacc agcgtctctt gcgcggtgac gccttgcgct cgcgcgatcg cgcgcgatag
      301 tgcgtctccg gtgagctggt cgaccaaagt tccctgcggc gcaatcacga gcgcggccga
      361 gctcggcacg agcacagcgc cgctgaacaa actggccagc agcaacagga aaattccgag
      421 cagcaagatc aaatgcagca ggcgccgcaa gtgatcgagt ccccgccaaa tcgcagagac
      481 gatgcgcaac ggcaaaccgg gattgtccat ggatcgtttt acctcgaaaa cgctcaacga
      541 ccgagcagca ctaacgacaa atcgggccaa aaagcaatga tcacgaccgc cagcagcgac
      601 acgagcagga acggctgtgt ggccaaatag atctccgtga tgtccttctc gaagcggtgg
      661 ctcgcgatga agagattcaa gcctaccgga ggcgtcaggt acccgagctc catagccgcg
      721 aggaaaacga ttccgagatg aatcggatcg atgccgtact gcgcggctat cggcagcaac
      781 agcggcacga tcagcacgat cgccgagaag atgtccaaga tcgcgccgag caccagcaga
      841 aacaacaaca ggaccaagag gaaggtcgtc ggcccttgca cgtattcgct gacgaattcg
      901 aacaatctct gcggcacgcc cgtgtcgatc atcagattcg tcgacgcgag cgatacgccg
      961 aggatcgcga gaatcgcgcc gaccagcacc gtcgactcgc gcatgatgcg cggaacgtcg
     1021 cgccacggca cctcgcggag tatcaggatc tccacgatca cgacgtacag cgcggtcacg
     1081 acagccgcct cggaaaccgc gaagtaaccg ctgtagattc cggccagcac gacgaccggc
     1141 agcggcagat cccagcgggc cgcaacgata gcggcccatg cttccgacca cgagcgctcc
     1201 gtcacgacgt agcgtacctt gcgattgcgc cagtacgagt acagcgacaa cagcacgatc
     1261 atcagtgttc ccggcaagac gccggcaacg aacaagtcat cgatcggcgc ctcggacacg
     1321 acgccgtaca agatcagcgg caacgacggc gcgaacagca accccaggct ccccgacgcg
     1381 gtaatcagcc ccaggttgaa gcgctcctcg taaccggctt gggtcagcgc agggaacagc
     1441 aacgcgccga gcgcgatgat ggtcacgccg gatgcgcccg tgaacgccgt gaacaacgca
     1501 cacgcgacga gtgagatcac cgcgaggccg cccggaaacc atcccagcaa cgcctgagac
     1561 aaacgcacga gccgccgcgg agcctgcccc gcgctcagca ggaatcccgc gaatgtgaac
     1621 aagggaatcg cgacgagcac cggcgtctcg gacaaaccga agaactcgat ggccacgacc
     1681 gataggtcga cgccctcgcg ctcgaaaccc acgaacgcgc ccgcgccaat cacggcaaac
     1741 aacggggcgc cgagcagcgt gatcacgatc agcagcgccg cgactgcgaa gctcataggt
     1801 gcggcacggg tgcagccccc attccgcgca gacgcagaat gccgtgcgcg agaaactggc
     1861 acgtcatcag agcaaaggcc accggcatga tcgcctgcag ccaccaagcg ggcacgccgt
     1921 cgagcaacac gtcgccgaac tcacgagagt cgctgacgaa tatccacgag taccacgcga
     1981 gcgcggcgct gacgaccgcc gcgaacagat cggccgtgac gagcgcgaat acctgtagcc
     2041 tttgcggcaa caagcggccc acggcgccca tcgtgatgtg ccggccatcc cggctggccg
     2101 caagcgcgcc gagcaacccg agccacaaca cggcgaggcg cgtcagacca tcgccccaag
     2161 cgaagctgat cgaaaaaacg ttgcgtagca ggatctgcac ggcaccgaac aggatcaacc
     2221 cgccgagaac tacgacgacg agccacgtct cgaccgcgcg ggccaagcgc cccgcgcgtt
     2281 cccaccgact cgccttcgcc tcggagctca aaggctactg gcgtgccagc tctggatacg
     2341 tgcgccggta ttcggcgagc atggcgagca atcgatcgaa cacgggcgca tcgatgtctg
     2401 gccgctcgcg gaccttcggg aacaggccct cgatcgtgcg ccgccagcca tcgacgtccg
     2461 cggcgttcac gttcacggct tcgatccccg acctcgcgag cacctcggcg gccttgagat
     2521 tgtcgtcgcg ggcctcgcgg tcgaggtcgt tgatgtagcg ctgcatcact tcccgaacga
     2581 tttgctgatc ttgcgcgccg agagccaaga acgcgttctt ctcgatcgcg aagacaccca
     2641 tggagtagga gatcggcagc tccgtgatgt acttgacctt cgtgtgccac tgcaacacga
     2701 gcgcggcgac cggcgaggcg aatgcgactt cgatgagccc ggtctggagc cccgtgagga
     2761 catcggtgac cggcaacacg gtcggcgata ggcccatcgt ctccatcgca aggaagctga
     2821 tcgcgtcccc ttcgggcacc cagactttct tccggcgcaa atcgtcgacg gtctggatcg
     2881 gctcgttgga tagcagcttc gcgaaaccac cttcgatgaa gccgaacgcg acgaacccgg
     2941 cctgatcgag tccccgaatc agctccgcgt cgagtgttgc gcgcacggcg tcgatctcgt
     3001 ccaacgatcg gaacagcaac ggaattccat atagattcag gccgccgtag cgttcgccga
     3061 gaccgccggc cgtgaacgca ccgccctgaa gctgcccgat cctgactttc cggagcactt
     3121 gagcgtcgtt gcccatcacg ccgccgggat agaacttgat cacgacccgc ccggcggttt
     3181 gcatccggac ctcttcggca ccggcgcgca tgtgctgcat ccagcgcgac ccgtccgggg
     3241 cgacggtcgc gatcttgatg tcgacggcat acgccgccaa agccgagatc gagaaccagg
     3301 ccgcgatcgc gatagtcgcc gaaaagcgga tcagcggagt tctgcctttg cccactagaa
     3361 gtactccttt gaagtggcca acaagccctg cgcttcctgc ttcgccagca cgttgaagag
     3421 cgtgtatcgc ggcgcctcga ccggcgcgct gatcacgtcc gtcaacaagc gatcgtgcag
     3481 ctcctgatcg aacacgagac gcgcgtagcg acgcgcgtat tctaccttga tcgagagatc
     3541 gcggccctcg gagagctcga tcgcgcgttc gaagtgcgcg cgcgccacgt cgggcttccc
     3601 gccgagcgct ggcgggcgca gcgagttcag aatgccgaga taaccgtgca cggccccatt
     3661 ctcgtacgtt tcatcgagcg ccagtgtgcg ctcgagcacg gcttcgaccc atggcagctc
     3721 ggctacggcg gtccagtcct cgctcgtggc atcgaggtgg ctgagccagc tgaccgcgta
     3781 tgagtacagc ggcccgatat ccctcttacc caccgcgccg agatccatga cgaaggtcgt
     3841 atagtcctcg ccggcccagc tgcacgcagc ttcgtgcgcg agacagattg cgcgctcacc
     3901 gtagcggcgc gccttgccgg tcagggtggg ggcacgctcg gacgccgcga acctggaccc
     3961 gtacagcgcg aacaactgtg cccccgcaga aagcagcg
//
LOCUS       DATCUD010000647         4766 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105409, whole genome shotgun sequence.
ACCESSION   DATCUD010000647 DATCUD010000000
VERSION     DATCUD010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4766
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105409"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1486)
                     /gene="uvrB"
                     /locus_tag="VIQ99_09385"
     CDS             complement(<1..1486)
                     /gene="uvrB"
                     /locus_tag="VIQ99_09385"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015258405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEY9183401.1"
                     /translation="MTDKSLQLVANFAPAGDQPQAIAGLVDGLQQGLAKQTLLGVTGS
                     GKTFSMANVISRVQRPTLILAHNKTLAAQLYGEMREFFPHNAVEYFVSYYDYYQPEAY
                     VPSSDTYIEKDASINSHIEQMRLSATKALLERRDVVIVATVSAIYGLGDPEAYHGMVL
                     HLARGAPMNQRELLRRLTELQYARNPLDLARGTYRVRGDVIDIFPAESEKDAVRLELF
                     DDVIEQIGFFDPLTGEITQRVPRATIYPKTHYVTPRETLLACVDQIRLDLAEQLTRLR
                     DANKLVEAQRLEQRTRFDMEMILEVGYCNGIENYSRYLSGRRPGEPPPCLFDYLPDDA
                     LLFVDESHVTIPQIGGMYKGDRSRKETLVEYGFRLPSALDNRPLSFEEYEQIAPQTIF
                     VSATPGPYERTHADQTVEQVVRPTGLVDPDVEVRPAGTQVDDVLSEINARVALNERVL
                     ITTLTKRMAEDLTDYLQEHAVRVRYLHADVETVERMEIVRDLRLG"
     gene            1564..2748
                     /locus_tag="VIQ99_09390"
     CDS             1564..2748
                     /locus_tag="VIQ99_09390"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019624223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY9183402.1"
                     /translation="MEFELAQRLSRIRPSATVSITALAQRLREQGRDIVVLSVGEPDF
                     PTPAHIKAAAAAALARNDTKYTPVDGARPLKEAVVTKLARDNGLRYTPEQVLISSGAK
                     QSCYNACLALLDAGDEVMIPAPHWVSYPDMARLADAEPVIMATTAERGFKITAEDLER
                     AITPKTRLLILNSPCNPTGAVYASAEWRAFGAVLRAHPRIVILSDEIYEHIHWGDEPF
                     TSFAAACPDLYERTITVNGMSKGYAMSGWRIGYAAGPSAVIKAMTSLQGQSTTNACTI
                     SQAAAREALLGDQSCVREMRNEFKHRHDFFYAGIRRLPGFDCVPASGTFYLFPNVEAA
                     MRAKRVASDVELCERLLEEVGLALVPGTAFGAPGHLRLSFAASMATLRAALERLEDFL
                     SA"
     gene            2861..2935
                     /locus_tag="VIQ99_09395"
     tRNA            2861..2935
                     /locus_tag="VIQ99_09395"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2893..2895,aa:Asn,seq:gtt)
     gene            complement(2939..3460)
                     /locus_tag="VIQ99_09400"
     CDS             complement(2939..3460)
                     /locus_tag="VIQ99_09400"
                     /inference="COORDINATES: protein motif:HMM:NF013989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HEY9183403.1"
                     /translation="MRRIRYSVAMSLDGYIAGPNGEYDWIELDPGGAAEYFKAFYAQF
                     DTVLMGRKSYEQAGGGVRPFKTYVVSRTLRPNEHPGVTVLGADALEFIAELRAQPGKD
                     IWLWGGGELFGNLASVGLVDTVEVGVCPVLIGAGRKLMAGCTEYVKLIQRPATHSLPG
                     HTLLCYDVRGRAL"
     gene            3513..4514
                     /locus_tag="VIQ99_09405"
     CDS             3513..4514
                     /locus_tag="VIQ99_09405"
                     /inference="COORDINATES: protein motif:HMM:NF024676.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family protein"
                     /protein_id="HEY9183404.1"
                     /translation="MTSDVMNPRYSAPMRADRLLSILLLLQSKGRMTAQTLAQRLEVS
                     ERTILRDMDALSGAGVPVIAERGARGGWRLMDGYQTKLTGLTSPEIQSLFLGRPPKVL
                     ADLGLKDAAEAAWIKLQAALPVEVRAQAEFVRARILIDPRGWREAGDSIIPLPVVLDS
                     LWRQRRLKFNYERSPEAPYERIVDPLGLVARGSAWYLVAAKESETRTYRVSRIRDAVV
                     LDEPSSRPPDFDLAMHWEETSTAFREQLPRYHATYLVDPSIMDWIRWYRGSRLQEQPT
                     DGGRVRIQVVFDTEYEAVRFALSLGGRGELLEPAHLRAQIAAAAVATTALHSVEPRL"
     gene            complement(4504..>4766)
                     /locus_tag="VIQ99_09410"
     CDS             complement(4504..>4766)
                     /locus_tag="VIQ99_09410"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY9183405.1"
                     /translation="GKLAFFDCGGTRLYLSAENPEPGPESILYLRVDDIGTAHSELTA
                     RGVEFIGAPHLIHRHADGTEEWMAFFKDPEGRPLALMSQVKA"
BASE COUNT          824 a         1543 c         1522 g          877 t
ORIGIN      
        1 ccccgagtcg caggtcgcgc acgatctcca tgcgctcgac cgtctcgacg tcggcgtgca
       61 agtagcgcac gcgcactgcg tgctcttgga ggtagtcggt caagtcctcg gccatgcgct
      121 tcgtcagcgt cgtgatcaac acgcgctcgt tcagcgcaac ccgtgcgttg atttcggaga
      181 gcacgtcgtc gacctgcgtg ccggccgggc gcacctcgac gtcggggtcg acgagccccg
      241 tcggacgcac gacctgttcc accgtttggt cggcgtgcgt gcgctcataa ggacccggcg
      301 tcgcagagac aaagatcgtc tgcggcgcga tttgctcgta ctcttcgaac gacaacggcc
      361 gattgtcgag cgcggaaggc aaacggaatc cgtactcgac gagcgtttcc ttgcgcgaac
      421 gatcgccctt gtacattccg ccgatctgcg gaatcgtcac gtggctttcg tcgacgaaca
      481 gcagggcgtc gtcgggcaga tagtcgaaca agcacggcgg aggctccccg ggtcgcctgc
      541 ccgacaagta gcgcgaatag ttttcgatgc cgttgcagta accgacctcg aggatcatct
      601 ccatgtcgaa gcgcgttcgt tgctcgaggc gctgggcctc cacgagcttg ttcgcgtcgc
      661 gaaggcgagt cagctgctcc gcgaggtcca ggcgaatctg gtcgacgcac gcgagcagcg
      721 tctcccgcgg cgtgacgtag tgtgtcttcg ggtagatcgt cgcgcgcggc acacgttgcg
      781 tgatctctcc cgtcaacgga tcgaaaaagc cgatttgctc gatcacgtcg tcgaacagct
      841 ccagacgcac ggcatccttt tccgactccg ccggaaagat gtcgatcacg tcgccgcgga
      901 cgcggtacgt gccgcgagcg aggtcgagcg ggttgcgtgc gtattggagc tccgtcaaac
      961 ggcgcagcag ttcgcgctga ttcattggcg caccgcgcgc gaggtgcagc accatgccgt
     1021 gataggcctc ggggtctccg aggccgtaga tcgcggacac cgtcgctacg atcacgacat
     1081 cgcggcgctc gagcagcgcc ttggttgccg acagccgcat ctgctcgatg tgactgttga
     1141 tcgacgcgtc cttttcaatg taagtgtcgc tcgacggcac gtatgcctcg ggttggtaat
     1201 agtcgtagta cgacacgaag tactcgaccg cgttatgagg gaagaactcg cgcatctcgc
     1261 catagagctg cgccgcgagg gtcttgttgt gcgcgaggat cagtgtcggc cgttgcactc
     1321 ggctgatcac gttcgccatg ctgaaagtct tgccggatcc cgtcactcca agcaacgtct
     1381 gctttgccag accttgctgc aaaccatcga cgagcccggc gatcgcctgc ggctggtcgc
     1441 ctgcgggggc gaaattcgcg acgagttgta gtgatttgtc cgtcattgcg tgaacggcgt
     1501 cggttggcgc acttcgactc gcatcttaag atagcgccgc ccacccgcaa aaaggctccc
     1561 ggcttggaat tcgagctcgc gcagcgcctg tcgcgcatcc gcccttcggc gaccgtcagc
     1621 atcacggcgc tcgcgcaacg actgcgcgag caagggcgcg acatcgtcgt actgagcgtg
     1681 ggcgagcccg acttccctac tccggcgcac atcaaggctg ccgccgccgc cgccctcgcg
     1741 cgcaacgaca ccaaatacac gcccgtcgac ggtgcgcggc cgttgaagga ggccgtcgtg
     1801 acgaagctcg cgcgcgacaa cggccttcgc tacacaccgg agcaggtgtt gatctcgagc
     1861 ggagcgaagc agtcctgcta caacgcttgc ttggctctgc tcgacgccgg cgacgaggtc
     1921 atgattccgg ctcctcactg ggtctcgtat ccggacatgg cgcgccttgc ggatgccgag
     1981 cctgtgataa tggcgaccac ggcggagcgt ggcttcaaga tcacggccga ggatctcgag
     2041 cgcgcgatca cgccgaagac caggctgttg atcctgaaca gcccctgcaa tccgaccggg
     2101 gcggtgtatg cgagcgcaga atggcgagcg ttcggcgcgg tgctgcgcgc gcatccgcga
     2161 atcgtgatcc tgagcgacga gatctacgag cacattcact ggggcgacga gccattcacc
     2221 agcttcgcag cggcgtgccc ggatctttac gagcgcacga tcacggtcaa cggcatgtcg
     2281 aagggctacg cgatgagcgg gtggcgaatc ggctacgccg cgggtcccag cgccgtcatc
     2341 aaggcgatga cgagcctgca aggtcagagc acgacgaacg cgtgcacgat ctcgcaagcg
     2401 gccgcgcgcg aggcattgct cggcgatcag agctgtgtgc gcgagatgcg caacgagttc
     2461 aagcaccggc acgacttctt ctatgccggc atacgccggt tgccgggctt cgactgcgtg
     2521 cccgcgagcg gcacgttcta cctgtttccg aatgtcgaag ccgcgatgcg cgcgaaacgc
     2581 gtcgcttccg acgtcgagct ctgcgagcga ttgctcgaag aagtcgggtt ggcgctggtc
     2641 ccgggcacgg ccttcggcgc cccgggccac ctgcggctgt cgttcgcggc ctcgatggcg
     2701 acgttgaggg cggctctcga gcgcctcgaa gacttcttgt ccgcctgagc gtgtgggatt
     2761 cgtcacgtct aactcactga gcagaaaagc aattcactcg ctctcgcctt gacttggcct
     2821 aagccatctt ccagaatgcc gccgccccaa agggcgcggt tccccggtag ctcagtggta
     2881 gagcgacgga ctgttaatcc gttggtcgct ggttcgagtc cggcccgggg agccaatttc
     2941 acagggcgcg cccgcgcacg tcgtaacaca gcaacgtatg gcccggcaga ctgtgcgtgg
     3001 ctgggcgttg tatgagcttc acgtattcgg tgcatccggc catcagcttg cggccagcgc
     3061 caatcagcac cgggcacacg ccgacctcca cggtatcgac gaggcccaca gaggcaaggt
     3121 tgccgaacag ctcgcccccg ccccacagcc aaatgtcctt gccgggttgc gcgcgcagct
     3181 cggcgatgaa ttcgagcgcg tcagcgccga gcacggttac gccaggatgc tcgtttggcc
     3241 gcagcgttcg cgacaccaca taggtcttga aaggtcgcac gccgccgccg gcttgctcgt
     3301 agctcttgcg ccccatcagc accgtgtcga actgcgcgta gaacgccttg aagtactccg
     3361 cggcgccgcc ggggtccagt tcgatccagt cgtactcgcc gttcggtccc gcgatgtagc
     3421 cgtcgaggct catggcgacc gagtatcgaa tccgccgcat gctcgctcct tcctcgaaga
     3481 cccacccacg ccgaaaccct aagcgccttt tcatgacatc cgatgtcatg aatccgcgct
     3541 acagtgctcc catgcgcgcg gaccggctgc tatcgatact gctgttgctg caatccaagg
     3601 gacggatgac cgcgcagacc cttgcacagc gcctggaggt ctccgagcgc acgattctgc
     3661 gcgacatgga cgcgctgagc ggcgccggcg tgcccgtgat cgcggagcgc ggggcgcgcg
     3721 ggggctggcg gctcatggac ggttatcaga cgaagctcac ggggctcacg tctccggaga
     3781 ttcagtcgct gtttcttggc cgcccgccca aagtgctggc cgacctcgga ctcaaggacg
     3841 ctgccgaagc cgcttggatc aagctgcaag cggcgttgcc cgtcgaggtt cgcgcgcaag
     3901 cggagttcgt gcgcgcgcgc atcctgatcg atccgcgcgg ttggcgtgag gccggcgact
     3961 cgatcattcc gttgccggtc gtgctcgatt cactgtggcg ccagcggcgc ctcaagttca
     4021 attacgaacg ttcgccggag gccccctacg agcgcatcgt cgacccgctc gggctcgtcg
     4081 cgcgcggcag cgcttggtac ttggtcgcgg cgaaggagag cgagacgcgc acgtatcgag
     4141 tctcgcgcat tcgcgatgcg gtcgtgctcg acgagccgag cagccgaccg cccgacttcg
     4201 atctggccat gcactgggaa gagacgtcga ccgcgtttcg cgagcagttg ccgcgctatc
     4261 acgcgaccta tctcgtggac ccctcgatca tggattggat ccgctggtat cgaggatcac
     4321 gactgcagga acagccgacc gatggcggcc gcgtaaggat tcaagtggtt ttcgataccg
     4381 agtacgaagc cgtccggttt gcgctgagct tgggcggtcg cggtgagtta ctcgagcccg
     4441 cgcacctgcg tgcgcagatc gcggccgcgg ccgtcgccac aaccgcgctg cattcggtcg
     4501 agcctaggct ttgacctgcg acatcaacgc gaggggccgt ccttcggggt ccttgaagaa
     4561 cgccatccac tcttcggtgc cgtcggcgtg acggtgaatc agatgcggcg cgccgatgaa
     4621 ctcgacgccg cgcgccgtga gctcgctgtg cgctgtgccg atgtcgtcga cacgcaaata
     4681 caaaatcgac tcgggcccag gctccggatt ctctgcactc aggtacagac gcgtgccgcc
     4741 gcagtcgaag aacgcgagct tgccga
//
LOCUS       DATCUD010000648         1544 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91550, whole genome shotgun sequence.
ACCESSION   DATCUD010000648 DATCUD010000000
VERSION     DATCUD010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91550"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..648
                     /locus_tag="VIQ99_09415"
     CDS             <1..648
                     /locus_tag="VIQ99_09415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HEY9183406.1"
                     /translation="EAGINVFVARMRALFVVARARFAMLGNSLFWASAAVMRVLLVAW
                     AAKVLGTENSSDVADLTLFLAFGIVLGALVVPRLIPIAHLRRARLAAYAMGVSILLFS
                     LASDATPARAVLILIGICGGMFLVPINAALQDIGHRTIGSGRAVALQSFFENSAMLTG
                     VGIYTGAVGLGAQPVASIVVVGVLVLIATTLVSWRLPPDPANDTTPSASSAEPNG"
     gene            complement(645..1400)
                     /locus_tag="VIQ99_09420"
     CDS             complement(645..1400)
                     /locus_tag="VIQ99_09420"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY9183407.1"
                     /translation="MRVPSFTLLASAAVSALSVAASAEEVLVLSSVGIKTVVEELAPS
                     FEKSTTIDVAATFGLASALKTRIEGGERFDVAILTPALLDELIAKGLVAADSRTVLAR
                     VGLGLMIKAGAPKPRVGTVDEFKQTLLAARSVTYASSGASGIAFLKILDDLGIAAEVK
                     AKAKPAASGEEVNANVLGGSSDLAVLPVSEILPVAGAELGALFPEPVQTYVLMAAGVS
                     SAARGRAPRDFVAFLAASSNDAVVRDKGMERVR"
BASE COUNT          245 a          518 c          510 g          271 t
ORIGIN      
        1 gaagccggaa tcaacgtgtt cgtggctcgc atgcgcgcgc tgttcgtggt tgcccgagcg
       61 cgcttcgcga tgctcggcaa ctcgctgttc tgggcgtcgg cggccgtgat gcgcgtgctg
      121 ctcgtcgctt gggcggccaa ggtcttgggg accgagaact cgagcgatgt cgccgatctc
      181 acgctgttct tggcgttcgg catcgtgctc ggcgcgctgg tcgtgccgcg cctaatcccg
      241 atcgcgcact tgcgccgcgc acgtctggct gcgtacgcaa tgggcgtctc gatcctgttg
      301 ttcagcctcg caagcgatgc gacacctgcg cgtgcagtgt tgatcttgat cggcatctgc
      361 ggcggcatgt tcctcgtgcc gatcaacgcg gcgctacagg acatcggtca tcgcacgatc
      421 ggcagcgggc gcgccgtcgc gctgcagagc ttcttcgaga actccgcgat gctgacgggc
      481 gtcgggatct acacgggagc ggtcgggctc ggggcgcaac ccgtggcgtc gatcgtcgtc
      541 gtcggcgtgc tggtgctgat cgcgaccacg ctcgtgtcct ggcgcttgcc gccggatccg
      601 gcgaacgata cgactccttc cgcttcctcg gccgagccga atggttagcg gactcgctcc
      661 atgcccttgt cgcggacgac ggcgtcgttg ctcgacgcgg ccaagaacgc gacgaaatcc
      721 cgcggcgcgc gaccgcgagc cgccgagctg acaccggcgg ccatcaagac gtaggtctgg
      781 acgggttccg gaaacaacgc gccgagctcg gcgcccgcga cgggcagaat ctcgctgacg
      841 ggcaacaccg cgaggtccga ggaaccaccg agaacgttcg cgttcacctc ctcaccggag
      901 gccgccggct tcgccttcgc tttgacctcc gccgcgatgc cgaggtcgtc gaggatcttc
      961 aagaacgcga tgccgctggc tccgctcgac gcataggtca ccgagcgtgc cgcgagcaac
     1021 gtttgcttga actcgtcgac ggtcccgacg cgcggcttcg gtgcaccggc cttgatcatg
     1081 aggcccaagc ccacgcgtgc cagcacggtc cgggaatcgg cggccacgag acctttcgcg
     1141 atcagctcgt ccagcagtgc gggtgtcagg atcgcgacgt cgaaccgctc gccaccttcg
     1201 atgcgtgtct tcagggcgct cgcgagaccg aacgtggcgg cgacgtcaat cgtcgtcgat
     1261 ttctcgaagc tcggcgcgag ctcctctacg acagtcttga tgccgaccga cgacaacacg
     1321 aggacctctt cggcgctcgc cgcgacggat agagccgaga ccgcggcgga ggcgagcagg
     1381 gtgaacgacg gaacgcgcat ggaagctact cctcgagaaa gcgacaacat cacggcggcc
     1441 cgcccttgtc gaagatcacg cgccactggc cgtcggattg gcgctgccag atcgaattga
     1501 accgtgcgga cacgacgccg tccgggttct tcacgagccc cgtc
//
LOCUS       DATCUD010000649         2620 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91554, whole genome shotgun sequence.
ACCESSION   DATCUD010000649 DATCUD010000000
VERSION     DATCUD010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2620
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91554"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..834
                     /locus_tag="VIQ99_09425"
     CDS             <1..834
                     /locus_tag="VIQ99_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018718142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEY9183408.1"
                     /translation="RFARFLPPRLWPPSVSINLRNHRKSLVVDGIEAFTGGVNIRDHY
                     LAKHPAEPIFDLHFRLNGPVVAQIETVFLRDWHFVTDEPITSARNAPKPCGTALCRVV
                     ADGPDGQLDRLTALFTGAIGAARQRVAIMTPYFLPPRELIAPLQAAALSGVDVAVVLP
                     ARNNLPYVHRATRHMLWELLERGVHVYYQPPPFAHGKLFYVDDHYAQIGSANFDPRSL
                     RLNFEMNVEVYDRDTVTTLAEYFESLRSRSTAVTLASVDGRRLATKAVDGAAWLFSPY
                     L"
     gene            complement(820..1764)
                     /locus_tag="VIQ99_09430"
     CDS             complement(820..1764)
                     /locus_tag="VIQ99_09430"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9183409.1"
                     /translation="MKLNRILVAVKPWERGLPLAANHARQLAQSVNAQIELVGTVFDA
                     GIAARRDRGESAARTTQDRTIAAARVELERLAGSMRDWGARITTKVVWGVPAYEGILS
                     AAAESRADLLVVGVHEPHTLHTRLTDTDWQLMRKVSCPLLLVKSPVFNGYRTVLAAVD
                     PLHAHDEPEGLDRAVLDAGRCFARAFGSTLRAVYAYRGAASFDVASAVEVTPGVFYGA
                     ENVEALHRRAVTELVAEYGVTGTDVDLVEGDAAEAVIDSVAKTHAELVVVGAPRRHGL
                     LAAAVGSTAETVAAAVPCDVLIVPTAAEARARAASQIG"
     gene            complement(1890..>2620)
                     /locus_tag="VIQ99_09435"
     CDS             complement(1890..>2620)
                     /locus_tag="VIQ99_09435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011417053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cation transporting ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HEY9183410.1"
                     /translation="EVSGMVLLDDNFATIVGAVREGRRIYDNLRRFIRYVLTTNSGEI
                     WTIFLAPFLGLPIPLLPIQILWINLVTDGLPGLALAAEPEEHNVMRRPPRVPTESVFA
                     RGLGAHALFIGLLMAGIAIGAQAWALRASAPEWQTLVFTTLCFMQLGHVLAIRSEETS
                     LFRLGVLSNRPLAGAVLLTIVLQLAIVYSPALNTVFKTMPLTAGQLVGAVSAGIAIFA
                     VVEIEKWWRGLRSRTTVSMADEPL"
BASE COUNT          446 a          935 c          815 g          424 t
ORIGIN      
        1 cgcttcgcgc gcttcctccc cccacggctc tggccgccgt cggtcagcat caacctgcgg
       61 aatcaccgca agagcttggt cgtcgacggg atcgaggcct tcacgggtgg cgtgaacatc
      121 cgcgatcatt atctcgcgaa acatcccgcc gagccgattt tcgacttgca ttttcgcttg
      181 aacggccccg tggttgcaca gatcgaaact gtgttcttac gggactggca cttcgtgacg
      241 gacgagccga tcacttcggc gcgcaacgcg ccgaaacctt gcgggaccgc actgtgccgc
      301 gtcgtagccg acggcccgga cggccagctc gatcgactga cggcgctgtt cacgggcgcg
      361 atcggcgcgg cgcgccaacg cgtcgcgatc atgacgccgt acttcctgcc gccccgcgag
      421 ctcatagcgc cgctgcaggc ggcagccttg tccggtgtcg acgtcgccgt cgtgctcccc
      481 gcgcgcaaca atctgccgta cgtccatcgc gcgacgcgtc acatgctctg ggagctgctc
      541 gagcgcgggg tacacgtgta ttaccagccc ccgccgttcg cgcacggcaa gctgttctac
      601 gtcgacgacc actacgcgca aatcggctcc gcgaacttcg atccgcgcag cctgcgactg
      661 aacttcgaga tgaacgtcga agtgtacgac cgcgacaccg tcacgacgtt ggccgagtat
      721 ttcgagtcgc tgcgcagccg ctcgaccgca gtcacgttgg cgtctgtcga cggccgccgc
      781 ctggcgacca aggccgtcga cggcgccgcg tggcttttct caccctatct gtgacgccgc
      841 gcgtgcgcgt gcttcggctg cggtcggaac aatcagcacg tcgcacggca ctgccgcagc
      901 aaccgtttcg gccgtgctgc cgacagcggc cgcgaggagt ccgtgccgcc gcggcgcccc
      961 gaccactacg agctcggcgt gggtcttggc cacggagtcg atcacggcct cggccgcatc
     1021 gccctcgacg agatccacgt ccgtccccgt cacgccgtac tcggcgacga gctcggtgac
     1081 ggcgcggcga tgcagagcct cgacgttctc ggcgccatag aacacgcccg gcgtgacctc
     1141 caccgccgac gcgacatcga acgacgcggc gccgcgatag gcgtaaacgg cccgcagcgt
     1201 cgagccgaat gcgcgcgcga aacagcggcc ggcatcgagc actgctcggt ccagcccctc
     1261 gggctcgtcg tgcgcgtgca gaggatcgac ggcggccaga acggtgcgat aaccgttgaa
     1321 gacggggctc ttcacgagca gcagcgggca cgagaccttg cgcatgagct gccaatccgt
     1381 gtcggtcagc cgcgtgtgca acgtgtgcgg ctcgtgcacg ccgacgacga gcaagtcggc
     1441 ccgggactct gcggccgcgc tcaagatacc ttcgtaggcc ggcacgcccc agacgacttt
     1501 cgtcgtgatt ctggctcccc agtcgcgcat cgagcccgcc agccgctcga gctccacgcg
     1561 cgccgccgcg atcgtgcggt cctgcgtcgt gcgcgcagcc gactcgccac ggtctcgtct
     1621 ggccgcgatg ccggcgtcga aaaccgtgcc cacgagctca atttgcgcgt tcacgctttg
     1681 ggccagctgc cgggcgtgat tcgccgccag cggtagtccg cgttcccagg gcttgaccgc
     1741 gaccagaatc ctgttgagct tcatcggcgc gattctccgc tcgcgcggtc cgacatcgct
     1801 actcgtacaa ccgcgtattc cgccgcgagg atcgccgttc tttaagcgca gcgcgcatgc
     1861 cgcaatcgca gccgggcccg tatttctacc tacaacggtt catcggccat cgagacggtc
     1921 gtgcgcgaac gaagaccacg ccaccacttc tcgatctcga ccacggcgaa aatcgcgatg
     1981 ccggcggaca cggcgcccac gagctgaccg gccgtcaacg gcatcgtctt gaacaccgtg
     2041 ttcagcgccg gcgaatagac gatcgcgagc tgcagcacga ttgtcagcag caccgcgccc
     2101 gcgagcggcc ggttgctgag gactccgagg cgaaacaacg acgtctcttc ggagcgaatc
     2161 gcgagcacgt gaccgagctg catgaagcac aacgtcgtga acacgagcgt ctgccactca
     2221 ggcgcactcg cgcgcaaggc ccacgcctgc gcgccgatcg cgattcccgc catcagcaga
     2281 ccgatgaaca gcgcgtgcgc tccgagcccg cgcgcgaaca cgctctccgt gggcacgcgc
     2341 ggcggacgcc gcatcacgtt gtgctcctcc ggctccgcag ccagcgccag ccccggcaaa
     2401 ccgtcggtca cgagattgat ccacaggatc tggatcggca gcaggggaat cggcaggccg
     2461 agaaacggcg ccaggaagat cgtccagatc tcgccgctgt tcgtcgtgag cacatagcga
     2521 atgaagcggc gcaggttgtc gtagatacgt cgaccttcgc gcacggcgcc gacgatcgtc
     2581 gcgaagttgt cgtcgagcag caccatcccg ctgacttctt
//
LOCUS       DATCUD010000650         1877 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62684, whole genome shotgun sequence.
ACCESSION   DATCUD010000650 DATCUD010000000
VERSION     DATCUD010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1877
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62684"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..279)
                     /locus_tag="VIQ99_09440"
     CDS             complement(<1..279)
                     /locus_tag="VIQ99_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183411.1"
                     /translation="MKLRHVFSCGLVLAALALAGCDEGRTRPPQTNARVVNVAPGFAE
                     LQFRRERVNPQQLTFKTVQDFTWDVDTYDFYVLERAIGLGAENREWTFS"
     gene            480..1448
                     /locus_tag="VIQ99_09445"
     CDS             480..1448
                     /locus_tag="VIQ99_09445"
                     /inference="COORDINATES: protein motif:HMM:NF022825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3187 family protein"
                     /protein_id="HEY9183412.1"
                     /translation="MTMARTMLGAALALGSTPASAQLAEPLHVRNLNPLVAVFGLPAW
                     DTVPLGTRFGVTTEIANHFRFSQAGDEVLMLDGETVRTNLAFTHGFGGGWSVGLEVPY
                     FHVGGGVLDDAIDGWHETFGMPDGGRNARPEDQLFYLFGERREPFFQLMDSASGVGDA
                     QLKVARLIGENQGFVVQAAVKFPTGDEEILAGSGSGDWSVTLLRTQPLVARKRPAGYY
                     WGLGIVRAGDPHPVTFDSHEWVGTGILGGSWQPWAKWGLKGQLDVHGPFYESELEEIG
                     ETAIQATLAAWRRLGERGTLDFAVVEDLAVSTAPDVVLHVTATWQW"
     gene            1445..>1877
                     /locus_tag="VIQ99_09450"
     CDS             1445..>1877
                     /locus_tag="VIQ99_09450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEY9183413.1"
                     /translation="MTVRAIGLRLCGAAGLSLWLSACAPPTPGGGQAPDPGTSGEARP
                     ASFDAGPVRPAHEYLEEPRFAGADLKRGELLGLACLACHTLAAGEGTLVGPNLHGVFG
                     RPAASLPGFEFSPALTASGLVWTPISLEAWLADPSGFVAGTT"
BASE COUNT          271 a          624 c          678 g          304 t
ORIGIN      
        1 cgagaacgtc cactcgcggt tttcggcgcc gaggcctatc gcacgctcca acacatagaa
       61 gtcgtacgtg tcgacgtccc aggtgaagtc ctggacggtc ttgaacgtca gttgctgcgg
      121 gttcacgcgt tcgcgccgga actgcagctc ggcgaagccg ggcgctacgt tcacgacgcg
      181 tgcgttcgtc tgcggcggcc gcgttcgccc ttcgtcgcaa cccgcgaggg ccagcgcggc
      241 caggaccagg ccgcacgaga atacgtgacg caacttcatg gaaacgtgaa tgagcaccgg
      301 tgcccgtcga aataggccgg tatggtacag gctgcgacgt caggaacgaa acgcagcggt
      361 agagcggcgt catgcggctg actacaatgc gggcggccgc taccgcagag cagggtgctt
      421 cggctcatgc ccgtgagact gcaacggcta cggaagattc cgcacgcaag gatccgctga
      481 tgaccatggc tcgaacgatg ctgggcgctg cgctagccct ggggtcgacg cccgcgtcgg
      541 cgcagctcgc cgagccgctg cacgtccgga acctgaatcc gttggtcgcc gtcttcgggc
      601 tgcccgcctg ggacacggtt ccgctcggca cgcggttcgg cgtcacgacg gagatcgcga
      661 accacttccg gttctcgcag gccggggacg aggtcctgat gctggatggc gagacggtcc
      721 gcacgaacct ggcgttcacg cacggcttcg ggggcggctg gtcggtcggc ctcgaggtgc
      781 cgtacttcca cgtcggtggc ggcgtgctcg acgacgcgat cgacggctgg cacgaaacct
      841 tcggcatgcc cgatggcgga cgcaacgcgc ggcccgagga ccagctgttc tatctgttcg
      901 gcgagcggcg cgagccgttc tttcagctca tggactcggc gagcggggtc ggcgacgcgc
      961 agctcaaggt tgcgcggctg atcggcgaga accagggctt cgtcgtgcag gccgccgtga
     1021 agtttccgac cggcgacgag gagatcttgg ccggcagcgg cagcggcgat tggtccgtca
     1081 cgttgctgcg cacgcagccg ctggtcgcgc gcaagcggcc cgccggctat tactgggggc
     1141 tcggcatcgt tcgcgccggc gatccgcacc cagtcacgtt cgactcgcat gaatgggttg
     1201 ggaccggcat cctcggcggc agttggcagc cgtgggcgaa atggggcttg aagggccagc
     1261 tcgacgttca cgggccgttc tacgagtcgg agctcgaaga gatcggcgag accgcgatcc
     1321 aggcgacgct ggccgcctgg cggcgcctcg gcgagcgcgg cacgctcgat ttcgcggtcg
     1381 tcgaggacct cgcggtcagc acggcaccgg acgtggttct gcacgtgacc gcgacctggc
     1441 agtggtgacg gtccgcgcca tcggcctgcg tctgtgcggc gcggccgggc tctcgttgtg
     1501 gttgtcggcg tgcgcgccgc cgacgccggg tgggggccag gcgccggatc cagggacctc
     1561 cggcgaggct cgacccgcat cgttcgacgc cgggcccgtc cggccggcgc acgagtacct
     1621 cgaggagccg cgcttcgcgg gcgccgacct taagcgcggc gagctgctcg gtctcgcctg
     1681 cctcgcctgc cacacgctcg cggcgggcga gggcacgttg gtcggcccca atctgcacgg
     1741 cgtgttcggg agacccgcgg cgagcctgcc cggcttcgag ttctcgccgg cgcttacggc
     1801 ctccggtctc gtctggacgc cgatatcgct cgaggcctgg ctcgccgacc cgagcggctt
     1861 cgtggccggc accacga
//
LOCUS       DATCUD010000651         1605 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20503, whole genome shotgun sequence.
ACCESSION   DATCUD010000651 DATCUD010000000
VERSION     DATCUD010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1605
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20503"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..828)
                     /locus_tag="VIQ99_09455"
     CDS             complement(<1..828)
                     /locus_tag="VIQ99_09455"
                     /inference="COORDINATES: protein motif:HMM:NF014741.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF222 domain-containing protein"
                     /protein_id="HEY9183414.1"
                     /translation="MSAVLSRSAFEPSGVSASNDQLSVDEIDLAIGRLARQMNAESYR
                     MLVLVREFDDRFGYAKWSFKTCAEWLAWRTGISPSAAREKVRAAQALRLLPAISAAFA
                     DGRLSYTKVRALTRVAREHDEDLLLAYALDAPASRVEERCRQIRNSGPDSIHSARRVW
                     ERRALSVWRDEAHGTLRLTVELPIEEGELIVRALDCAVAAGEVSNDIDPDSIGESKGA
                     AWQAQQADALVAVARSYLDGGTDRDGSTADRYQVVVHVDEKSLRGGIGCSDVPIDTVK
                     "
     gene            complement(984..1403)
                     /locus_tag="VIQ99_09460"
     CDS             complement(984..1403)
                     /locus_tag="VIQ99_09460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183415.1"
                     /translation="MIAADRKSIELADDAVWIRAEYDVTERVAFFDARRPEGRTVHGH
                     SLARWQDDILVVETSNFTENPIGITAGLPSSNEKHLVERFALDADGQSLLYSFELTDP
                     VYLAAPLIGEMRWLYRPNVDFELVPCDPDATRSFLDN"
BASE COUNT          319 a          510 c          467 g          309 t
ORIGIN      
        1 tttgaccgtg tcgatcggca catcggagca cccgatccct ccgcggaggg atttttcatc
       61 gacgtgtacg acgacctgat agcgatctgc cgtcgagcca tccctgtcgg taccgccatc
      121 gaggtaggac ctcgcaaccg cgaccagcgc gtcggcctgc tgtgcctgcc acgccgcgcc
      181 cttcgactca ccgatcgagt ccggatcgat gtcgttgctg acttcacccg ccgcgactgc
      241 gcagtcgagc gcgcgcacga tcagttcgcc ttcctcgatc ggcaactcga ccgtcaagcg
      301 caacgtgccg tgcgcttcgt cgcgccacac cgataacgca cgccgctccc atactcgccg
      361 agcggaatga atggagtccg gtcccgagtt acggatttgt cggcagcgct cctcgacgcg
      421 cgatgccggc gcgtcaagtg catacgcgag cagcaagtcc tcatcgtgct cgcgagccac
      481 gcgtgtcagc gctcgcacct tcgtatacga aagacgcccg tcggcgaacg ccgccgagat
      541 cgcgggcaac agccgcaacg cctgcgccgc acgcaccttc tcgcgcgccg ccgaaggcga
      601 gatgccggtg cgccacgcga gccactcggc gcacgtcttg aacgaccact tcgcgtagcc
      661 gaaccgatca tcgaactcgc gcacgagcac gagcatgcga tagctctccg cgttcatttg
      721 ccgtgcgaga cggccgatcg cgaggtcgat ctcatcgacg gaaagctgat cgttggaagc
      781 ggaaacaccc gacggctcga aggcagaacg cgacagcacg gcgctcatga cgggctcctg
      841 caggaggtgg ctgggatact gagtatatat ccagctatac gtcactaagc caataataat
      901 cagctattta cagtagtttt cactgcctca cgctggggta tagatgactg tcgcggaaaa
      961 taccggacca gctttggtcg ctgtcagtta tcgagaaaag accgcgtggc atctggatcg
     1021 cacggaacca actcgaagtc gacattcggg cgatacagcc agcgcatctc tccgatcagg
     1081 ggcgcggcga gataaacagg atcggtcagc tcgaagctgt aaagcaacga ttgcccatcc
     1141 gcgtcgagcg cgaatcgttc aaccagatgt ttctcgttgc tcgaaggcaa cccggccgtg
     1201 atgccaattg ggttttcggt aaagttggaa gtctcgacaa cgaggatgtc atcctgccat
     1261 cgagccagtg agtggccgtg caccgtcctg ccctcgggcc gacgcgcgtc gaagaaagcg
     1321 acgcgctcgg tcacatcgta ctcggctcga atccatacag cgtcgtcagc cagctcgatt
     1381 gattttctgt cggcggcgat catgattctc ggagcggggc gcggctcgca agtggttctg
     1441 ctgcctgcgg ctaccgcgtc gtaactagcg acggcccttc gtcctgcttc cgtaagcttg
     1501 agttgggagg gatcgtctat ccacgtccat ggcgctgccg aatcaatgag cgtaatccag
     1561 gtaccactca cggacttcgc tctggcgtca gtctgagtgc tttgt
//
LOCUS       DATCUD010000652         2668 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_27531, whole genome shotgun sequence.
ACCESSION   DATCUD010000652 DATCUD010000000
VERSION     DATCUD010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27531"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1883
                     /locus_tag="VIQ99_09465"
     CDS             <1..1883
                     /locus_tag="VIQ99_09465"
                     /inference="COORDINATES: protein motif:HMM:TIGR03504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HEY9183416.1"
                     /translation="IGLGVALVLFAALWFVRRRRQETEDVTGRWEALEAEIDEDPQTR
                     DATERMRRQVPEETIVVEEQHAEHPRSSEPEPPARRAAATAAAPAARAARAAPASDET
                     LSSQTVINLDQADAIAEADFHVAYGLYDQAAELVQKAIEATPDRRDLKLKLLEVFFMW
                     GNKDAFLKAAQALRAEIGQADDGDWDKVVIMGRQICPDERLFTEATTGGGRVDVDLQA
                     GDSPLDLAFDEAASADVDAAASAGLDFQLESSDERPAPKPAAKPAKPAKAAPPRDDML
                     DIGSKTAAGLEAALFAPLGDDDDTGARTSPDVAADALAVTQESPTIERPGVSDWATVE
                     STALHSSEAPTVETPTIESPAAKTSATGATKTLAIPRRNESPTVEQPALGAAPADYTA
                     EIDLDDLGLDVKDLEGLPGDLGDLPMAAGGETDTREQKALRDDDALLSATGVTKVLHE
                     DDDLTASSTSVMEDQEATMLAPGFDEGTSTLTGTEVLDNRLKVDETGSTSLVRSLRAP
                     KDSVDLDLADLTAALQGADTVEQPRASQFSHDVFGGGATPLDLDIGSDSAVADDEPTG
                     TEEVSPLDPQTMTEVGTKLDLARAYIDMGDPEGARSILEEVLDEGDSNQRREAQGLID
                     VL"
     gene            1965..>2668
                     /gene="truA"
                     /locus_tag="VIQ99_09470"
     CDS             1965..>2668
                     /gene="truA"
                     /locus_tag="VIQ99_09470"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEY9183417.1"
                     /translation="MPRIALGLEYDGTDFIGWQIQRNGRSIEGVLASAVSFVADEAVT
                     VHGSGRTDAGVHAVQQVAHFDTRVHRSPRQWLLGINSNLPADVAAHWVQEMPIDFDAR
                     RSAVSRRYRYTILLKPTRPVLRRHRVWWLRDSLDCGAMTAAAAAWLGEHDFSAFRAAG
                     CQAKSPMRRLMAVRIEERRRAGETLVTFEFTANAFLHHMVRNFVGTLVAVGRGEASPA
                     DAAAILGGRDRTRAGET"
BASE COUNT          465 a          881 c          937 g          385 t
ORIGIN      
        1 ggatagggct cggcgtagcg ctggtgttgt tcgcggcgct gtggttcgtg cgccggcgtc
       61 gtcaggaaac cgaagacgtg accggccgtt gggaagcgct cgaagccgag atcgacgagg
      121 atccgcagac acgcgacgcc acggaacgca tgcgccggca agtgccggaa gagacgatcg
      181 tcgtcgagga gcagcacgcc gaacacccgc ggtcgagcga gccggagccg cccgcgcgcc
      241 gcgccgcggc gactgccgcc gcgccggccg cacgtgccgc gcgcgccgcg ccggcgtcgg
      301 acgagacgct gtcgagccag accgtcatca acctcgacca agccgacgcg atcgccgagg
      361 ccgatttcca cgtcgcttat ggcttgtacg accaggccgc cgagctcgtg cagaaagcga
      421 tcgaggcgac gcccgatcgc cgcgacctca agctgaagct gctcgaagtc ttcttcatgt
      481 ggggaaacaa ggacgcgttc ttgaaggctg cccaagccct gcgcgcggag atcggtcaag
      541 ccgacgacgg cgactgggac aaggtcgtca tcatgggccg ccagatctgc cccgacgagc
      601 ggctgttcac ggaagccacg acgggcggcg gccgtgtcga cgtcgacctt caggccggcg
      661 attcaccgct cgatctcgcg ttcgacgagg ctgcgtccgc ggatgtcgac gccgccgcga
      721 gcgcgggtct cgatttccag ctcgaaagct ccgacgaacg acctgctccg aagccggccg
      781 cgaaacccgc gaaaccggcc aaggctgcgc cgccgcgtga cgacatgctc gacatcggct
      841 ccaagacggc ggccggtctc gaggctgcgt tgttcgctcc gctcggcgac gacgacgaca
      901 ccggtgctcg cacgagcccc gacgtcgctg cggacgcatt ggccgtgacg caagagtcgc
      961 cgacgatcga gcgaccggga gtcagcgact gggcgacggt cgagagcacc gcgctgcatt
     1021 cgtccgaggc gcccacggtc gagacgccga cgatcgagag cccggcagcg aagacttcgg
     1081 caacgggcgc gacgaagacg ctcgcgattc cgcgacgcaa cgagtcgccg accgtcgagc
     1141 agcccgcgct cggagcggcg ccggccgact acacggccga gatcgatctc gacgatctcg
     1201 gtctcgacgt caaggatctc gaaggcttgc ccggcgatct cggcgatctg ccgatggcgg
     1261 ccggcggcga gaccgatacg cgcgagcaaa aggcgctgcg cgacgacgac gcgttgctgt
     1321 ccgcgaccgg agtcacgaaa gtgctccacg aggacgacga tctgacggcg agctccacgt
     1381 ccgtgatgga agatcaggaa gcgacgatgc tcgctcccgg attcgacgag ggcacgagca
     1441 cgctgacggg caccgaggtg ctcgacaacc ggctcaaggt cgacgaaacc ggcagcacgt
     1501 cgctggtgcg gtcgctgcgt gcgccgaaag actcggtcga tctcgatctt gccgatctga
     1561 cggcggctct ccagggcgcc gacacggtcg agcagcccag ggcctcgcaa ttctcgcacg
     1621 acgttttcgg cggtggcgcg acgccgctcg atctcgacat cggcagcgat tccgcggtcg
     1681 ccgacgacga gccgacgggc accgaggagg tgagcccgct cgatccgcag acgatgacgg
     1741 aggtcggcac gaagctcgac ttggcgcgcg cgtatatcga catgggcgac cccgaaggtg
     1801 cgcgcagcat tctcgaggaa gtgctcgacg aaggcgattc gaatcaacgc cgcgaagccc
     1861 aagggttgat cgacgtcttg tagtgcgagc tcgtttcggc tgaagcacgg ccgccgcgtg
     1921 ggcggccgtt gcttttttgg gcttgagtgg acggctggca agcaatgccg agaatcgcac
     1981 tgggactcga gtacgacggc accgacttca tcggttggca gatccaacgg aacgggcgca
     2041 gcatcgaggg cgttctcgcg agcgccgtga gcttcgtggc cgacgaggcc gtgaccgtgc
     2101 atggctccgg gcgcaccgac gccggagtgc acgcggtgca gcaagtggct catttcgata
     2161 cccgggtgca ccggagtccg cgccaatggt tgctcgggat caactcgaac ctgcccgccg
     2221 atgtcgcggc gcactgggtt caagagatgc cgatcgattt cgacgcgcgc cgctcggccg
     2281 tgagccggcg ttaccgttac acgattctgc tgaagccgac gcgtccggtg ctgcgtcgtc
     2341 atcgcgtgtg gtggctgcgg gactcactcg attgcggcgc gatgaccgcg gctgcggccg
     2401 cgtggctcgg tgagcacgac ttctcggcgt ttcgcgcggc gggctgccag gccaagtcgc
     2461 cgatgcggcg cctcatggcc gtgcggatcg aggaacgacg gagagccggc gagacgctcg
     2521 tgacgttcga gttcacggcc aacgcgtttc tccaccacat ggtccggaac ttcgtcggca
     2581 cgctggtggc cgtgggccgc ggcgaagcgt cccccgccga cgccgcagcg atcctgggcg
     2641 gccgcgatcg cacgcgggcc ggggaaac
//
LOCUS       DATCUD010000653         3745 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41798, whole genome shotgun sequence.
ACCESSION   DATCUD010000653 DATCUD010000000
VERSION     DATCUD010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3745
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41798"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(20..880)
                     /gene="rpoH"
                     /locus_tag="VIQ99_09475"
     CDS             complement(20..880)
                     /gene="rpoH"
                     /locus_tag="VIQ99_09475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008931907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEY9183418.1"
                     /translation="MTTAVAVRPAELMLAGPLGSLDHYIQAANAIPVLSADEERQLAI
                     RFRETDDLDAAKRLVLSHLRFVVHVARGYAGYGLPLGDLIQEGNVGLMKAVKRFDPSV
                     GVRLVSFAVHWIRAEIHEFVLRNWRLVRVATTKAQRKLFFNLRKAKKHLGWLTRDEAE
                     AVAADLGVTPREVAEMEQRLSSRDLSFDPQPEEDDEFAPAAYLPSPNSDPAQSVERDD
                     ADSDTHERLAGALAGLDERSRQIVTRRWLVDQKATLHELAAEYGVSAERIRQIEANAI
                     NKLKKQVAPT"
     gene            complement(967..1884)
                     /gene="ftsX"
                     /locus_tag="VIQ99_09480"
     CDS             complement(967..1884)
                     /gene="ftsX"
                     /locus_tag="VIQ99_09480"
                     /inference="COORDINATES: protein motif:HMM:TIGR00439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HEY9183419.1"
                     /translation="MYALRHWLGLHRANLVGAVTRIVGQPFASATTILVIAIALALPA
                     SLRVAVNNAAALSETWQSVADFSVYLKLDVSADAARRTARAIEARDDVAAVTVIDRDT
                     ALAEFRERSGFGDALDALDENPLPHSLLVRPASGVAGDVETLANAVRALPEVELVQID
                     TGWVTRLRAILALAGRFVDLATVLVGFAVAVVVGNTIRLEINNRSVEIEVTKLVGGTD
                     GFIRRPFLYLGLCYGLAGALVAAAVVAVGLLLLGPPVRTLATLYGSGFVLRGLSLTET
                     GFLLAGGALLGWAGAGLAAARHLRAIEPK"
     gene            complement(1888..2562)
                     /gene="ftsE"
                     /locus_tag="VIQ99_09485"
     CDS             complement(1888..2562)
                     /gene="ftsE"
                     /locus_tag="VIQ99_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012972060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEY9183420.1"
                     /translation="MIRFENVYKRYPGGRDALSGVTFNMEPGEFVFLTGPSGAGKSTL
                     LKLVALIERPTRGTVLVSNQNTTRIPRRKIPAFRQRLGIVFQDHKLLYDRSVFDNVAL
                     PLVIAGATRREIEKRVRAALDQVGLRGRESHAPITLSTGEQQRVGIARAVAPRPDVLI
                     ADEPTGNLDPELSLEIMELFTRFNEVGVTLLIATHDLELIDRMPRRRIRLVAGQIAGD
                     SGAETP"
     gene            complement(2559..3485)
                     /gene="ftsY"
                     /locus_tag="VIQ99_09490"
     CDS             complement(2559..3485)
                     /gene="ftsY"
                     /locus_tag="VIQ99_09490"
                     /inference="COORDINATES: protein motif:HMM:TIGR00064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEY9183421.1"
                     /translation="MTDDDNTGFFAKLKARLNRGTTWLTTELRGLGAKPLDEDVIEEL
                     EARLLTADVGVEATSWLIGEMRTANKRKPGTPAVELLRETAAELLRTIESPLVIGNAH
                     RPFVILAVGVNGTGKTTTVGKLAHRLRSQGHSVLLAAADTFRAAAVEQLKEWGRRADV
                     PVIAQNAGADPAAVVHDALLAARARDIDVVLADTAGRLHTAAGLMDELDKIKRVVRRF
                     DATAPHEIMLVLDASQGQNALAQALRFHERLGLTGLAITKLDGTAKGGILLAIARQLK
                     VPIRLAAVGEGIGDLDVFRADDFVRALLGDAP"
     gene            3515..>3745
                     /locus_tag="VIQ99_09495"
     CDS             3515..>3745
                     /locus_tag="VIQ99_09495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004236246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmD family RNA methyltransferase"
                     /protein_id="HEY9183422.1"
                     /translation="MVKRNAKRVQGSVRVIAGEWRGRRIAVAVDTPVRPTPDRVRETL
                     FNWLKDVVVGARCLDLFAGTGVLGFEALSRGAE"
BASE COUNT          597 a         1258 c         1267 g          623 t
ORIGIN      
        1 tcgaggacgg aaaccgcgct caggtcggcg cgacctgctt cttcagcttg ttgatcgcgt
       61 tggcttcgat ctgccggatc cgctccgccg agacgccata ctcagccgcg agctcgtgaa
      121 gcgtggcctt ctgatccacg agccaccgcc gcgtcacgat ctggcgactg cgctcatcga
      181 gcccggccag cgcaccggcg aggcgctcgt gcgtgtcgct gtcggcgtcg tcgcgctcca
      241 ccgactgtgc cgggtcgcta ttcgggctgg gcagatacgc ggccggcgca aactcgtcgt
      301 cttcctccgg ttgggggtcg aacgacaagt cgcggctgct caggcgctgc tccatttccg
      361 ctacttcgcg cggtgtgacg cctagatcgg cggccacggc ctccgcctcg tcacgagtga
      421 gccagcccaa atgcttcttg gccttccgga ggttgaagaa cagcttccgc tgggctttgg
      481 tcgtggcgac acggaccagg cgccagttgc ggagcacgaa ctcatggatc tccgcgcgaa
      541 tccagtggac cgcgaacgat acgaggcgga ctccgacgct cgggtcgaag cgtttcacgg
      601 ccttcatgag gccgacgttg ccttcctgga tcaggtcgcc gagcggcagc ccatagccgg
      661 cataaccgcg agcgacgtgc acgacgaagc gcaagtgaga caacacgagg cgcttggccg
      721 cgtcgaggtc gtccgtctct cgaaagcgga tcgcgagctg gcgctcctcg tccgcgctca
      781 agaccggaat ggcgttggcc gcctgaatgt agtggtccag gctgccaagc gggcccgcga
      841 gcatgagctc cgccggccga accgcaacag cagtagtcat atcccgtacc tcccttctcg
      901 aggccaatat tagcactcgg ggcgttagag tgctaacgag ggtccgagtg cccgaaggat
      961 agcctgctac ttgggctcga tggcccggag gtggcgggcg gccgccaggc cggcccccgc
     1021 ccagcccagc agcgcgccgc cggccagcag gaacccggtc tccgtcaggg agaggccccg
     1081 caggacgaat ccactgccgt atagggtcgc caaggtgcgg acggggggac cgagcagcag
     1141 cagaccgacc gcgaccacgg cggccgcgac gagcgccccg gccaggccat aacacaggcc
     1201 gaggtacaga aacggccggc gaatgaaccc gtcggtcccg cccacgagct ttgttacctc
     1261 gatctccacg ctgcggttgt tgatctcgag ccgtatcgtg ttaccgacga cgaccgcgac
     1321 cgcgaagccg accagcacgg tggccaagtc cacgaagcgg ccggccaggg ccaggatcgc
     1381 gcgcagccgc gtgacccacc cggtgtcgat ttgaaccaat tcgacttcgg gcagcgcgcg
     1441 taccgcgttc gcgagggtct cgacgtcgcc ggcaacgccg ctcgctgggc gcaccaacag
     1501 agagtgcggc agcgggttct cgtcgagagc gtcgagcgca tcgccgaagc ccgagcgctc
     1561 gcggaactcc gcgagcgccg tgtcgcgatc gatgacggtt acggcggcga cgtcgtcgcg
     1621 cgcctcgatc gctcgagccg tgcgccgtgc cgcgtcggcg gagacgtcga gcttcaagta
     1681 cacggagaag tccgcgacgc tctgccacgt ctcgctgagc gccgcagcgt tgttgacggc
     1741 cacacgcagg ctggccggca gcgcgagcgc gatcgcgatc acgaggatcg tcgtcgcgct
     1801 cgcgaacggc tggcctacga tccgcgtgac cgcgccgacg aggttcgcgc gatgcagtcc
     1861 cagccagtgg cgaagcgcgt acatgggcta cggggtttct gcgcccgagt cgccggcgat
     1921 ctgtcctgcg accaagcgga tccgccggcg cggcatgcga tcgatcagct cgagatcgtg
     1981 cgttgcgatc agcaacgtca cgccgacctc gttgaagcgc gtgaacagct ccatgatctc
     2041 gagcgagagc tcgggatcca ggttgccggt cggctcgtcg gcgatcagca cgtcgggcct
     2101 cggtgccacg gcgcgcgcga tgcccacgcg ttgctgctcg cccgtcgaca atgtgatcgg
     2161 cgcatgcgat tcccggccgc gcagcccgac ctgatcgagc gccgcgcgga cgcgtttctc
     2221 gatctcgcgc cgggtcgctc cggcgatcac gagcggtaac gcgacgttgt cgaacacgct
     2281 gcggtcatac agcagcttgt gatcctgaaa cacgatgccg agccgttgcc ggaaagccgg
     2341 aatcttgcgg cgcgggatcc gcgtcgtgtt ctgattgctg acgagcaccg tgccgcgcgt
     2401 cgggcgctcg atcagtgcga cgagcttcag cagtgtgctc ttgcccgcgc ccgacggccc
     2461 ggtaaggaag acgaactcgc cgggctccat gttgaacgtc actccggaca aggcgtcgcg
     2521 gccgccgggg tagcgtttgt agacgttctc gaagcgaatc acggagcgtc gccgagcagg
     2581 gcgcgcacga aatcgtcggc gcggaagacg tcgagatcgc cgatcccttc gccgacggca
     2641 gctagtcgaa tcggcacttt caactgccgt gcgatcgcaa gcaggatccc gcccttggcc
     2701 gtgccgtcga gcttcgtgat cgcgaggccg gtcaacccga gccgctcatg gaaccgcaac
     2761 gcttgtgcga gagcgttctg cccttggctc gcgtccagca cgagcatgat ctcgtgcggg
     2821 gccgtggcgt cgaaacggcg cacgacgcgt ttgatcttgt cgagctcgtc catcaggccc
     2881 gcggccgtgt gaagcctgcc tgccgtgtcg gcgagcacga cgtcgatgtc gcgcgcacgt
     2941 gccgccagca gcgcgtcgtg aaccacggct gcgggatccg cgccggcgtt ctgcgcgatc
     3001 acgggcacat cggcgcgccg gccccattcc ttgagctgct cgacggccgc ggcccggaac
     3061 gtgtcggcgg ccgcgagcag gacactgtgg ccttgcgagc ggaggcggtg cgcgagcttg
     3121 ccgacggtcg tggtcttgcc cgtgccgttc acgccgacgg ccaagatcac gaatggtcta
     3181 tgcgcgttgc cgatcacgag tggcgactcg atcgtgcgga gcaactctgc cgccgtctcg
     3241 cgcaacagct cgacggcggg cgtaccgggc ttgcgcttgt tggccgtgcg catctcgccg
     3301 atcagccagc tcgtcgcctc gacgcccacg tcggcggtca agagccgggc ttcgagttcc
     3361 tcgatcacgt cttcgtcgag tggcttcgct ccgagcccgc gcaactctgt agtaagccag
     3421 gtcgtgccgc ggttgaggcg cgccttcaac ttcgcgaaga atcccgtgtt gtcgtcgtcg
     3481 gtcactcgag cacgttctgc tagtgttgcc gcacatggta aagcgcaacg ccaagcgtgt
     3541 gcagggtagc gtccgggtca tcgccggcga atggcgcggg cggcggatcg cggttgcggt
     3601 agatacgccc gtgcgtccga cccccgaccg cgtgcgcgaa acgcttttca attggttgaa
     3661 ggacgtggtc gtcggcgcgc gctgtctcga tctcttcgcc ggcaccggag tgctcggctt
     3721 cgaagcgctg tcgcgcggtg cggaa
//
LOCUS       DATCUD010000654         2379 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98848, whole genome shotgun sequence.
ACCESSION   DATCUD010000654 DATCUD010000000
VERSION     DATCUD010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2379)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2379)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2379
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98848"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..484
                     /locus_tag="VIQ99_09500"
     CDS             <1..484
                     /locus_tag="VIQ99_09500"
                     /inference="COORDINATES: protein motif:HMM:NF045433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="general secretion pathway protein GspK"
                     /protein_id="HEY9183423.1"
                     /translation="PDTDLRFPSGGEDVTYSGADPPYRTANTMATSASELMAIAGFDR
                     EAYLKVAPYVTALPVGTKLNVNTASAVVLASLSDNIDSSTAESLVEQRAGAEFLDIDA
                     TFEGLVEPDVLQVIDGVSEHFLLTATVTLATNQLTMRSVLQRDRSGLTRALFRSLGVE
                     "
     gene            486..1709
                     /gene="gspL"
                     /locus_tag="VIQ99_09505"
     CDS             486..1709
                     /gene="gspL"
                     /locus_tag="VIQ99_09505"
                     /inference="COORDINATES: protein motif:HMM:TIGR01709.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HEY9183424.1"
                     /translation="MADTLFVRLSDDGTATWGAFDATGRLVGTIGHGGLEGARAALAN
                     RRCTVLVNGIDVLTTQAELPAASQARLRQIAPFSLEESLADDVERLVFAIGARLASGA
                     TQIAAVARERIDGWLSQLRAAGIAPHALCSEADGVPDVPSTLVLVIEGNRIAGRDPGR
                     PPFVFEGLGLRQVLDLVRGRVADDGEPRHVRIFADEAGRIAHAAELEALGQTFASVDV
                     KILSEGVFPYLAATLAQRAGTNLLQGTYAPRSNWLALLRPWRLAASLLAGSVALAIVL
                     EGAEYWQLRRTDRELTDAVAAACQRVVGDSSTSGCQREVRQRLGARAEGTSEDFLSTL
                     AAIAALRDDETRIDALSYRNNQMDLQVVAPSVTALDEFSRQLEQTRRFEVELEATSQV
                     DAGTEGRLRVVGVQQ"
     gene            1706..2173
                     /locus_tag="VIQ99_09510"
     CDS             1706..2173
                     /locus_tag="VIQ99_09510"
                     /inference="COORDINATES: protein motif:HMM:NF016493.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein M"
                     /protein_id="HEY9183425.1"
                     /translation="MKAWFFGLQPRERWILTIGAAAFVVIMLWWLVFLPLSADAELLR
                     TSVETKQRLLVEVAEVEGTQPGGVSPGLQTMNQTLVVIVSNTAASHGLGAPRTRQNGP
                     SGIDVTLQGVPFDALATWLVTLHDSYGVDVETASFSSAREPGLVNGQLSLHRL"
     gene            2175..>2379
                     /locus_tag="VIQ99_09515"
     CDS             2175..>2379
                     /locus_tag="VIQ99_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein N"
                     /protein_id="HEY9183426.1"
                     /translation="MTNRWSWLALGAGAYFAFTLAAVPAGAVLRWWAPPGVAFQGVEG
                     TLWSGSAASGSAGGFTVQDLRWRV"
BASE COUNT          365 a          751 c          827 g          436 t
ORIGIN      
        1 ccccgatacg gatctgcgtt ttccgagcgg cggcgaggac gtcacgtaca gcggcgccga
       61 tccgccgtat cgcaccgcga atacgatggc gacctccgct tccgagttga tggccatcgc
      121 gggattcgat cgcgaggcct atctgaaggt cgcgccctac gtgaccgcac tgccggtcgg
      181 cacgaagctg aacgtcaaca cggcgtccgc ggtggtgttg gcgtcgctgt ccgacaacat
      241 cgactcgtcg accgccgagt cactcgtcga gcaacgcgcc ggcgccgagt tcctcgatat
      301 cgatgcgacg ttcgagggcc tcgtcgagcc cgacgtgctg caggtgatcg acggcgtaag
      361 cgagcacttc ttgttgaccg cgacggtgac actcgctaca aatcagctca cgatgcgctc
      421 ggtgctgcag cgcgatcgca gcggcctcac gcgggcgcta tttcgtagtc tcggagtcga
      481 gtagcttggc cgacacgctc ttcgtgcgat tgtccgacga tgggaccgcc acctggggcg
      541 cgttcgatgc gaccggacgg ctcgtcggca cgatcggcca cggcgggctc gagggcgcgc
      601 gcgcagcgct cgcgaatcgc cgctgcaccg tgctcgtgaa cggtatcgat gttttgacga
      661 cgcaagccga gctgcctgcg gccagtcagg cgcgcctgcg ccagattgca ccgttctcac
      721 tcgaggaatc gctggccgac gacgtcgagc ggctcgtgtt cgcaatcggc gcgcgattgg
      781 cgtcgggtgc gacgcagatc gcggcagtcg ccagggagcg gatcgacggc tggctctcgc
      841 aactgcgagc ggccggtatc gcgccgcatg cgctgtgctc ggaagcggat ggcgttccgg
      901 atgtcccctc cacgctcgtg ctcgtgatcg aaggtaaccg gatcgcagga cgcgatcccg
      961 ggcgaccgcc gttcgtgttc gaagggctcg gtctgcggca ggtgctcgat ctcgtgcgcg
     1021 ggcgcgttgc cgacgacggc gagccgcgac atgttcggat attcgccgac gaggcaggcc
     1081 gtatcgcgca cgcggcggag ctcgaggcgc tcggccagac gttcgctagc gtggacgtga
     1141 agatcttgag cgagggcgtg ttcccatacc tcgccgcgac gctcgcccaa cgcgccggca
     1201 ccaatctgct tcaaggcacg tatgctcctc ggtcgaactg gctcgcgttg ttgcgtccgt
     1261 ggcgccttgc ggcatctcta ttggctggga gcgtggccct ggccatcgtg ctcgagggcg
     1321 cggagtactg gcagctgcgt cgcaccgatc gcgagctcac cgacgccgtt gcagccgcgt
     1381 gtcagcgagt ggtcggcgat tcgagcacct cgggttgtca gcgcgaggtg cggcagcgct
     1441 tgggtgcccg cgcggaaggc acgagcgagg atttcctgag cacgctggcg gcaatcgccg
     1501 cgttgcgcga tgacgaaact cgcatcgacg ccctgagcta ccgcaacaat cagatggatc
     1561 tgcaagtggt tgcgccaagc gtgactgcgc tcgatgagtt ctctcgtcaa ctcgagcaga
     1621 cccggcgctt cgaggtcgag ctcgaggcga cgagtcaggt cgacgcgggt accgagggac
     1681 gcctgcgagt cgtcggagtg cagcaatgaa agcgtggttc ttcggcttgc agccgcgcga
     1741 gcgctggatt ctgacgatcg gcgccgccgc cttcgtggtc attatgttgt ggtggctcgt
     1801 ctttctgccg ttgtcggccg acgctgaatt acttcgaacg tccgtcgaga ccaaacaacg
     1861 cttgctggtc gaggtcgcgg aagtcgaagg cacgcagccg ggcggcgtct cgccgggctt
     1921 gcagaccatg aatcagactc tcgtcgttat cgtcagcaac acggccgcta gccacggttt
     1981 gggcgcgccg cgcacgcggc agaacggacc gagcggtatc gacgtgactt tgcagggcgt
     2041 gccgttcgac gccctcgcaa cgtggctcgt aaccttgcac gatagctacg gcgtcgacgt
     2101 cgagacggcc tcattcagca gtgcacgcga gcccgggctc gtgaacggcc aactttcgct
     2161 gcataggctc taaagtgacg aatcgttggt cgtggctggc cttgggtgcg ggcgcgtact
     2221 tcgcgttcac gctcgccgcc gttccggcgg gcgcggtgtt gcggtggtgg gcgccgcccg
     2281 gcgtcgcatt ccaaggtgtc gagggcacgt tgtggtccgg cagcgcggcg agcggctcgg
     2341 ccggcggatt caccgtgcag gatctgcgct ggcgcgtgc
//
LOCUS       DATCUD010000655         2890 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20522, whole genome shotgun sequence.
ACCESSION   DATCUD010000655 DATCUD010000000
VERSION     DATCUD010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2890
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20522"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..985)
                     /locus_tag="VIQ99_09520"
     CDS             complement(<1..985)
                     /locus_tag="VIQ99_09520"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: protein motif:HMM:NF016311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEY9183427.1"
                     /translation="MAVWRIVVYLLLPYALGNLVWRALRYPAYWHRWPERFGFVTPST
                     GLRTIWVHAVSVGEVRSAAPLVEALAERHPGHRIVVTTMTPTGSQQVRDLLGERVSHC
                     YAPYDSPDAVRRFLDRVRPEAAIIAETEYWPNIFSECGRRRIPLMLVNGRVSQASLRG
                     YLRVPKTTRAMLANADLLCTQTAVDAQRLRNLGAPPELVHVTGNLKFDVELPGALLDE
                     ARELRDQWGRDRPVWIAASTHPGEERKVLAAFAALKQVFPRLLLVLVPRHPERFGAVA
                     SLCRRRGLSVALRSRTPGALPAGTEVLVGDTMGELQRLYAAADVAFIGGSLV"
     gene            complement(987..1682)
                     /locus_tag="VIQ99_09525"
     CDS             complement(987..1682)
                     /locus_tag="VIQ99_09525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HEY9183428.1"
                     /translation="MRPETELEVFSKLGGTFVTPIGTLIERTRGIRGFVSDWDGVFNQ
                     GAKGEGAESTYSEPDSMGTNLLRYALWRRKRELPIAALITGAENPSARSFALREHFHA
                     IYYGALNKTAAIEALCRAHGVSSEHLVCIFDDVNDLGMAFGCGIRIFVQRSASPLLRE
                     YVVRQGLCDYVTAHPPERHAVREVCELLLGLLGAFDSVVASRVAWDRDYAAYFAARQA
                     HATEFVDLTQAKG"
     gene            complement(1684..2721)
                     /locus_tag="VIQ99_09530"
     CDS             complement(1684..2721)
                     /locus_tag="VIQ99_09530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002704459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HEY9183429.1"
                     /translation="MDLYLDSVDFKEIEAALDYGFVKGLTTTPTFMHRHGITDIDGAI
                     VKLSKMVPELQVEALGDTPDQIVAEAERILALGLERPPVFKVPIANDGVKACHRLRTR
                     GYKVNVHLIYTLNQAYMAMEAGASFICPLAGRMQDQGHDAIQLFEQCVEVIDRYGYDS
                     KVMFSSVRHAEHVRQAMLTGVHVCTMPFSVMKNLCENTLTALGTAQFREHTALMTMRV
                     KDVVRKANPVCETGETLSSAMVKMTESRLGVVTLVDAKGAVAGVFTDGDLRRKLQADG
                     RGILDKTLAAIGFSKTPITVDRESLLNEAVKIFKKAEVDSIVVVDGTRPVGVLDVQDL
                     IKLGLLGQEHL"
     gene            complement(2731..2889)
                     /locus_tag="VIQ99_09535"
     CDS             complement(2731..2889)
                     /locus_tag="VIQ99_09535"
                     /inference="COORDINATES: protein motif:HMM:NF012991.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183430.1"
                     /translation="MAAGVDGFFIESHPNPSEALCDAASQYALDDLESFMRPLIDIHN
                     LVRSQAVH"
BASE COUNT          490 a          987 c          942 g          471 t
ORIGIN      
        1 gcacgaggct gccgccgatg aacgcgacgt cggcggccgc gtaaagccgc tgcagctcgc
       61 ccatcgtgtc gccgacgagc acctcggtgc ccgccggcaa cgcaccgggc gtgcggctcc
      121 gcagcgcgac ggacaggccg cgccgacggc acaggctcgc cacagcgccg aaccgctcgg
      181 ggtgccgcgg cacgagcacg agcagcagcc gcgggaacac ctgcttgagc gccgcgaacg
      241 ccgcgagcac cttgcgttcc tcgccgggat gcgtgctggc cgcgatccac acgggccggt
      301 cgcgtcccca ctggtcgcgg agctcgcgtg cctcgtcgag cagcgcgccc ggcagctcga
      361 cgtcgaactt gagattgccg gtcacgtgca cgagctcggg cggcgcgccg aggttgcgca
      421 gccgctgcgc gtccaccgcg gtctgcgtgc acaagaggtc cgcgttcgcg agcatcgcgc
      481 gcgtcgtctt cggcacgcgc aggtagccgc gcaatgacgc ctgcgagacg cggccgttca
      541 cgagcatcag cgggattcgc cgccgcccgc actcggagaa gatgttcggc cagtactccg
      601 tctcggcgat gatcgccgcc tcggggcgca cgcggtccag gaaccgccgc accgcgtccg
      661 gcgaatcgta tggcgcgtag cagtggctca cccgctcgcc gagcaaatcc cggacctgct
      721 gcgagcccgt aggcgtcatc gtcgtgacca cgattcgatg cccaggatga cgctcggcga
      781 gcgcctcgac gagcggcgcc gcggagcgca cttcccccac cgacacggcg tggacccaga
      841 tcgtgcgcag gcccgtcgac ggcgtgacga acccgaaccg ctcgggccag cggtgccaat
      901 acgcggggta acgtagcgcg cgccacacga ggttgccgag cgcgtacggc aacagcagat
      961 agacgacgat gcgccagaca gccacgtcag cccttcgctt gcgttaagtc gacgaactcg
     1021 gtggcgtgcg cttggcgcgc ggcgaagtag gccgcgtagt cgcgatccca cgcgacgcgc
     1081 gaggcgacga cgctgtcgaa cgcccctagc aatccgagca gcagctcgca aacttcgcgg
     1141 accgcatggc gttccggcgg atgcgccgta acgtagtcgc agagcccttg ccggacgacg
     1201 tactcgcgta gcagcgggct cgcgctgcgt tgcacgaaaa tccgaatgcc gcatccgaac
     1261 gccatgccga ggtcgttgac gtcgtcgaag atgcacacga gatgctcgga cgagacgccg
     1321 tgcgcgcggc acagcgcttc gatcgcggcc gtcttgttga gcgcaccgta atagatcgcg
     1381 tggaagtgct cgcgcaacgc gaaggagcgc gcggaagggt tctcggctcc ggtgatcagc
     1441 gctgcgatcg gcagctcgcg cttgcgacgc cacagcgcgt agcgcaggag attcgtgccc
     1501 atggagtcgg gctcgctgta agtgctctcc gcgccctcgc ctttcgcgcc ctgattgaac
     1561 acgccgtccc aatccgagac gaacccgcga atgccgcgcg tccgctctat caacgtgccg
     1621 atcggcgtga cgaaggtgcc gccgagcttc gagaacacct cgagctcggt ctcgggcctc
     1681 atgctagagg tgctcttggc cgagcaaccc gagcttgatc agatcctgca cgtcgagcac
     1741 gcccaccggg cgcgtgccgt cgacgacgac gatgctgtcg acctcggcct tcttgaagat
     1801 cttcacggct tcgttcaaca ggctctcgcg gtcgaccgtg atcggcgtct tcgagaagcc
     1861 gatggcggcg agcgtcttgt ccagaatgcc gcggccgtcg gcctggagct tgcggcgcag
     1921 atctccgtcg gtgaacacac cggcgacggc gcctttcgca tcgacgagcg tcacgactcc
     1981 tagccgcgat tcagtcatct tcaccatcgc ggagctcagc gtctcgccgg tctcgcacac
     2041 ggggttcgcc ttgcggacga cgtccttcac gcgcatcgtc atgagcgctg tgtgctcgcg
     2101 gaactgcgcc gtgccgagcg cggtcagcgt gttctcgcag agattcttca tgaccgagaa
     2161 cggcatcgtg caaacgtgca cgccggtcag catggcctgc cgcacgtgct cggcgtggcg
     2221 caccgacgag aacatgacct tgctgtcgta gccgtagcgg tcgatgacct cgacgcattg
     2281 ctcgaacagc tgaatcgcgt cgtggccctg gtcctgcatt cggcccgcga gcgggcagat
     2341 gaacgaagcg cccgcttcca tcgccatata cgcctgattc agcgtgtaga tcaggtgcac
     2401 gttgaccttg tagccgcgcg tgcgcaggcg gtggcacgct ttcacgccgt cgttcgcgat
     2461 cggcaccttg aacacgggcg ggcgctccag gccgagcgcc aagatccgtt ctgcctcggc
     2521 cacgatctga tccggcgtgt cgccgagcgc ctcgacctgc aattccggaa ccatcttcga
     2581 cagcttcacg atcgcgccgt cgatgtcggt gatgccgtga cgatgcatga acgtgggcgt
     2641 cgtcgtgagc cctttcacga aaccgtagtc gagcgcggct tcgatttcct tgaagtctac
     2701 ggaatcgaga tacaggtcca tatcgatcct ctaatgcacc gcctgcgagc ggaccaagtt
     2761 gtgaatgtcg atcagcgggc gcatgaagct ctcgagatcg tcgagagcgt actgactcgc
     2821 cgcatcgcac agagcttcgc tcgggttcgg gtgagactcg atgaagaagc cgtcgacgcc
     2881 cgcggccacc
//
LOCUS       DATCUD010000656         1617 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_27558, whole genome shotgun sequence.
ACCESSION   DATCUD010000656 DATCUD010000000
VERSION     DATCUD010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27558"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VIQ99_09540"
     CDS             <1..273
                     /locus_tag="VIQ99_09540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEY9183431.1"
                     /translation="SIDAGQANNTNLGDGWYREMTFELTGDSPRVDVKTYSTHYRAYS
                     SELPTYAQWYRPREQPDMTDDEFLRADEFTLELGDFRERFGAGSAQ"
     gene            270..758
                     /locus_tag="VIQ99_09545"
     CDS             270..758
                     /locus_tag="VIQ99_09545"
                     /inference="COORDINATES: protein motif:HMM:NF019095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEY9183432.1"
                     /translation="MRNTPTRRHGAALIVGLIAVATAALAQDAGTFHARLDWVPISGA
                     ERNDVAGTGGITASLSRSSLSLTGCFEGLPAAATRASLHIGVATGARGPAVADLTITR
                     ATSGTIAGEVPLDREQRDAVLAGHAYVQLHAERGVAPDNAVLWGWLLANQRPSSCGEA
                     SR"
     gene            755..>1617
                     /locus_tag="VIQ99_09550"
     CDS             755..>1617
                     /locus_tag="VIQ99_09550"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY9183433.1"
                     /translation="MSSIRRTALCLALGVSLHALTAHAFTTEQAAAGRVAYDATCATC
                     HGATLRQLPNALLAGPEFIGRWGTRGTGDLITQARSTMPPDNPGGLPAETYANIVAYL
                     LQANGGTADAVAIGVDTTARLGVGLTAAAPVAAASGAAPPPAPTGVIVAGTVRNFVPV
                     TDEMLRNPDPNDWLMLRHDYSATSFSPLDQITPDNARQLTLEWIWPMRDGGTNQPAPL
                     VYDGTMYLANTGGIVQALDARTGNLIWEHHVGAEVSPRGIVLYRDMLIFESAGEWAVR
                     PQAARLIALDAR"
BASE COUNT          272 a          585 c          532 g          228 t
ORIGIN      
        1 agcatcgacg cgggacaggc gaacaacacg aacttaggcg acggctggta ccgtgagatg
       61 acgttcgagc tgaccggcga ctcgccgcgc gtcgacgtca agacctactc cactcactat
      121 cgcgcgtact cgagcgagct gcccacttac gcacagtggt acaggccgcg cgagcaaccg
      181 gacatgaccg acgacgagtt cctgcgggcc gacgagttca cgctggagct cggcgacttt
      241 cgcgagcgct tcggcgcagg ttcagcacaa tgagaaatac gccaacgcga agacacggtg
      301 ccgcactgat cgtcggtctg atcgccgtgg caaccgccgc gctcgcgcag gacgcaggca
      361 ctttccatgc gcgcctcgac tgggtcccga tcagcggcgc cgaacgcaac gacgtcgcgg
      421 gcaccggcgg gatcacggcg agcctctcgc gctccagcct ctcgctgacg ggctgcttcg
      481 agggcttgcc cgccgcggcc acgcgcgcga gcctgcacat cggtgtcgcg accggcgcgc
      541 gcggtcccgc cgtcgcggac ctgacgatca ccagggccac gagcggcacg atcgctggcg
      601 aagtgccgct cgaccgcgag cagcgcgacg cggtgctggc cggacacgct tacgttcaac
      661 tccacgcgga acgcggagta gcgcccgaca acgccgtgct gtggggctgg ctgctcgcca
      721 atcagcgccc gtcgtcgtgc ggtgaggctt ctcgatgagc tcgatccggc gcaccgccct
      781 gtgcctcgca ctcggcgtgt cgttgcacgc cctgaccgcg cacgcgttca caacggagca
      841 agcggcggcc ggccgcgtgg cctacgacgc gacgtgtgcg acgtgtcacg gcgcgacgct
      901 gcgccagctg ccgaatgcct tgctcgcggg accggagttc atcggacgct ggggcacccg
      961 cggcacgggt gacctgatca cgcaagcacg ttccacgatg ccgcccgaca atccgggcgg
     1021 cctgcccgcc gaaacgtacg cgaacatcgt cgcctatctg ttgcaggcga acggcggcac
     1081 ggccgatgcg gtcgcgatcg gtgtcgacac gacggctcgc ctcggcgtcg ggctcacggc
     1141 cgcagcgccg gttgccgcgg cctcgggtgc ggcgccgccg ccggcgccga ccggcgtcat
     1201 cgtcgcaggc acggtacgca acttcgtccc ggtcaccgac gagatgctcc ggaacccgga
     1261 cccgaacgac tggctcatgc tgcgtcacga ttacagcgcg acgagcttca gcccgctcga
     1321 ccaaattact cccgacaacg cgcgccagct cacgctcgag tggatctggc cgatgcgcga
     1381 cggcggaacg aatcaacccg ctccactcgt ctacgacggc acgatgtatc tcgcgaacac
     1441 gggcggcatc gtgcaagcgc tcgacgcacg gaccggcaac ctcatctggg agcaccacgt
     1501 cggcgccgag gtctccccgc gcggcatcgt gctctaccga gacatgctga tcttcgagag
     1561 cgccggcgaa tgggccgtgc gtccgcaagc cgcgcgcttg atcgcgctcg acgcacg
//
LOCUS       DATCUD010000657         1790 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20557, whole genome shotgun sequence.
ACCESSION   DATCUD010000657 DATCUD010000000
VERSION     DATCUD010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20557"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..870)
                     /locus_tag="VIQ99_09555"
     CDS             complement(<1..870)
                     /locus_tag="VIQ99_09555"
                     /inference="COORDINATES: protein motif:HMM:NF015100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit D"
                     /protein_id="HEY9183434.1"
                     /translation="MRFEQPAAPHAPPLVSVPIVMRRVLYALAPAAICHAWFFGFGLL
                     LNFALAAVGALLTEGAVLRLRGRPTRHALNDGSALVTSALLSFTLPPIVPFWIPLLGS
                     AFAITVAKQLYGGLGKNLFNPAMVGFVFLLVSFPVEMTQWIPPRMGDLDYRHLDVGQH
                     VTYVFTGRLPADVDVDALTRATPLDLVKDGLRTGRPFDEIRSGSLFGDFGGRGWEWVA
                     NLIAVGGLYLLYTGTIRWHIPVAYFAGLLTPATVLYLIDPSSYASPGFHLFSGAAMLG
                     GFFVATDPVSAAAT"
     gene            complement(870..>1790)
                     /gene="rsxC"
                     /locus_tag="VIQ99_09560"
     CDS             complement(870..>1790)
                     /gene="rsxC"
                     /locus_tag="VIQ99_09560"
                     /inference="COORDINATES: protein motif:HMM:NF003454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HEY9183435.1"
                     /translation="YPTADKLTTPVPCKTLIVNGAECEPYISCDDMLMREHAAEIVAG
                     ALLLADVLAAPRCIIAIERDKPQAMEAIEEAAKRIEDPRLKLAEVPTIYPAGGERQLV
                     ELLTGEEVPSGRYPGEFGYVCQNVGTAFAVERLRGAHEPLLSRIVTVTGRGVRTPQNV
                     ETLIGTPIAELIAFCGGYNADVVRLIAGGSMMGYALPDDDVPVSKATNCIIAATASEV
                     RLDPYEWPCIRCGDCAMVCPSRLLPQDLLVAANAVDLPALAMLGLTDCIECGCCDVIC
                     PSHIFLTERFRVAKRAVAAHQQRTKAAESS"
BASE COUNT          329 a          588 c          617 g          256 t
ORIGIN      
        1 cgtggccgcg gccgagacgg gatcggttgc gacgaagaac ccgccgagca tcgcggcgcc
       61 gctgaacagg tggaaacccg gggacgcgta gctcgaggga tcgatcaagt agagcacggt
      121 cgcaggcgtc agcaggccgg caaagtaggc gaccgggatg tgccagcgga tagttccggt
      181 gtagagcaaa tacagccccc cgaccgcgat cagattcgcg acccactccc agccgcggcc
      241 gccgaagtcg ccgaacagcg agccgctgcg gatctcgtcg aacgggcggc ccgtccgcaa
      301 gccatctttg acgaggtcga gcggcgtcgc gcgcgtcagc gcgtcgacgt cgacgtccgc
      361 cggcaggcgg cccgtgaaca cgtaagtgac gtgctggccg acgtcgaggt ggcggtagtc
      421 gagatcgccc atacgcggcg ggatccactg cgtcatctcg accggaaacg agaccagcag
      481 gaacacgaat ccgaccatcg ccgggttgaa caggttcttg ccgagccccc cgtagagctg
      541 tttcgcgact gttatcgcga acgcgctgcc gagcagcgga atccagaacg gcacgatcgg
      601 cggtagcgtg aacgacagaa gcgcggacgt gacgagcgcg ctgccgtcgt tcaacgcatg
      661 gcgcgtcggg cggccgcgca agcgcaacac agcgccctcc gtgagcaacg caccgacagc
      721 cgcgagcgcg aagttcagga gcaaaccgaa gccgaagaac catgcatgac agatcgcggc
      781 cggtgcgagc gcatacagca cgcggcgcat gacgatcggc acgctgacga gcggtggcgc
      841 gtgcggcgcc gcgggttgct cgaagcgcat tacgacgact ccgcggcttt cgtgcgctgc
      901 tgatgcgccg cgaccgcgcg tttcgcgacg cggaatcgct cagtgagaaa gatgtggctc
      961 gggcagatca cgtcgcagca gccgcactcg atgcagtccg tgaggccgag catcgcgagc
     1021 gcagggagat cgaccgcgtt ggcggcgacg agcagatcct gcggcaacag acgcgacggg
     1081 cacaccatcg cgcagtcgcc gcaacgaatg cacggccact cgtaaggatc gagccgcacc
     1141 tcgctggccg tggccgcaat gatgcagttc gtggctttgc tgaccggcac gtcgtcgtcg
     1201 ggcagcgcgt agcccatcat gctgccgccg gcgatcaggc gtacgacgtc ggcgttgtag
     1261 ccgccgcaga acgcgatcag ctccgcaatc ggcgtgccga tcagtgtctc gacgttctgc
     1321 ggggtccgga cgccgcggcc cgtaacggtg acgatacgag agagcagcgg ctcatgcgcg
     1381 ccgcgcaggc gttccacggc gaaggcggtc cccacgttct ggcagacgta gccgaactcg
     1441 ccgggataac ggccgctcgg cacttcttcg cccgtcaaga gctcgacgag ctggcgctcg
     1501 ccgccggcgg gatagatcgt cggcacctcg gcgagcttca agcgcggatc ctcgatgcgc
     1561 ttggccgcct cctcgatcgc ttccatcgcc tggggtttgt cgcgctcgat cgcgatgatg
     1621 cagcgcggcg ccgccagcac gtcggccaac aggagcgcgc ccgcgacgat ctcggcggca
     1681 tgctcgcgca tcaacatgtc atcgcagctg atgtacggct cgcactcggc gccgttcacg
     1741 atcaacgtct tgcaggggac tggcgtcgtg agcttgtccg cggtggggta
//
LOCUS       DATCUD010000658         1716 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62772, whole genome shotgun sequence.
ACCESSION   DATCUD010000658 DATCUD010000000
VERSION     DATCUD010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62772"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="VIQ99_09565"
     CDS             <1..572
                     /locus_tag="VIQ99_09565"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY9183436.1"
                     /translation="IYTNDNKGRWPGDPYFEPLWQELNRRNAIVYMHPLAPRCCSDLK
                     YGAAASMVEYDFDVTRGVVSIVVNGVMFRYPNIRFITVHSGGTVPMLAGRMNDRIPRG
                     AEQYLPNGLYAELRKWYYDIAHASFPWPYAAMKAFMPESQILFGTDYAPEPIESTVDQ
                     LPGLKLSRAFEQMMLRGNAERLFPRFKVK"
     gene            complement(576..820)
                     /locus_tag="VIQ99_09570"
                     /pseudo
     CDS             complement(576..820)
                     /locus_tag="VIQ99_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000050481.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(943..>1716)
                     /locus_tag="VIQ99_09575"
     CDS             complement(943..>1716)
                     /locus_tag="VIQ99_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010338589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY9183437.1"
                     /translation="FMAPLPRAWQWLDGSAFPQHGILMAKAFDRPPFESEWPLMYQGM
                     SHLFHGPTDDIPFVAESDGIDFEGELGVITGPVPMGTSRAEAAASIRLAVQINDWSLR
                     HYAPLEMKTGFGWILAKPACGMAPIALTPDELGSAWQNHRVVVTLHVERNGERFGAVP
                     ATEMAHGFDELIAHAARTRPLCAGTLIGSGTVSHSRYREVGSCCISERRAIEMIDHGG
                     VASTPYLSFGERVRMLAVAEDPELPLFGVLDQRVIGPSS"
BASE COUNT          292 a          597 c          544 g          283 t
ORIGIN      
        1 gcatctatac caacgacaac aaagggcgat ggcccggcga tccctacttc gagccgctgt
       61 ggcaggagct gaatcggcgc aatgccatcg tctacatgca cccgttggcg ccgcggtgct
      121 gcagcgatct caaatacggc gcagcggcca gcatggtgga atacgacttc gatgtgacgc
      181 gcggcgtcgt cagcatcgtg gtcaacggcg tgatgttccg ctatccgaac atccgcttca
      241 tcaccgtgca ttcgggcggc acggtgccga tgctcgccgg ccgcatgaac gaccgcattc
      301 cgcggggcgc cgagcagtat ctgccgaacg ggctgtatgc cgagctgcgc aagtggtatt
      361 acgacatcgc ccacgcaagc ttcccgtggc cgtacgccgc catgaaggcc ttcatgccgg
      421 agtcgcagat cctcttcggg accgactacg ctcccgaacc catcgagtcg accgtggacc
      481 aactgcccgg cctgaagctg tcgcgggcgt tcgagcagat gatgctgcgg gggaatgcgg
      541 aacgattgtt cccgcggttc aaggtgaagt aggtggcgca gacggtagcg gacctgcccc
      601 tgcgccgtca gatcgagccg ctcctccgac accggcggcc ggctcacgta gcgagcgagc
      661 ctttccagct tctctcgctg ttcggcttcg acgccaatgc cggcgtgcag cgaaaacgcc
      721 gcgtatcgcg cgaccccttt ccgctcctcc tctcgccccg gcaccgtctg taacgccgcg
      781 ggcccaccgc cactcggtac gtgatcgagt gccccacaag atcctccatc ggcccgcccg
      841 catcgggcgc gagatccagg aggtcgtcgc cggttccgcc ggccgagcgc ctatcgcgcg
      901 ccgagctcgt gccgacacgc gcgccgtagc gcgtctgaag gttcaactcg acggaccgat
      961 tacgcgttgg tccagcacgc cgaacagcgg cagctccgga tcctcggcca cggccagcat
     1021 ccgcacgcgt tcgccaaaac tgaggtacgg cgtggacgct accccgccgt gatcgatcat
     1081 ctcgatcgcg cggcgctcgc tgatgcagca cgagcccacc tcgcggtaac ggctgtgcga
     1141 gacggtgccg gagcctatta gcgtgcctgc gcacaacggc cgcgtccgtg ccgcgtgcgc
     1201 gatcagctcg tcgaacccgt gcgccatctc cgtggccggc actgcgccga agcgttcgcc
     1261 gttgcgctcg acgtgcagcg tcactacgac gcggtggttc tgccaggcgc tgccgagctc
     1321 gtccggcgtc agcgcgatcg gcgccatgcc gcaggcaggt ttggcgagga tccagccgaa
     1381 gccggttttc atttcgagcg gcgcgtaatg gcgcaacgac caatcgttga tctgcacggc
     1441 caagcggatg ctggccgccg cctcggcacg gctcgtcccc atcggcaccg gacccgtgat
     1501 gacgccgagc tcgccttcga agtcgatgcc gtcggattcg gcaacgaacg ggatgtcgtc
     1561 cgtcggaccg tggaacagat gcgacatgcc ctgatacatc agcggccact cgctctcgaa
     1621 aggcgggcga tcgaacgcct tcgccatcag gatgccgtgc tgcggaaagg ccgagccatc
     1681 gagccactgc caggcgcgcg gcagcggggc catgaa
//
LOCUS       DATCUD010000659         1886 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41857, whole genome shotgun sequence.
ACCESSION   DATCUD010000659 DATCUD010000000
VERSION     DATCUD010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1886
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41857"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1171)
                     /locus_tag="VIQ99_09580"
     CDS             complement(<1..1171)
                     /locus_tag="VIQ99_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009576512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEY9183438.1"
                     /translation="MKTVFRMGIPVSGKNFFPSNIQGLPTWYEIRVSKEGYLARSGQV
                     DIMVAMNAQTYLRDLEEVAPGGVLIYDSTWPRDRQLVRDDIDILGVPLARMCNEQFKD
                     ARTRILMKNMAYVGVLAALLELDRGVIGQLVQETFARKPALIESNQKAIDLGFEYACA
                     NLTCPLPLRVRPMNKTAGHIMIDGNTAAALGCVYAGATVGAWYPITPSTSLMDAFKTF
                     CERYRKDAQSGERRYCIVQAEDELAAIGIVLGATWNGARAFTPTSGPGLSLMGEFLGF
                     AYFTELPAVLFDVQRVGPSTGMPTRTQQADMLAAAYASHGDTKHVLLFPRDPRECFEM
                     AVEAFDLADRLQTPVIVLSDLDIGMNDWLCRDLDWDPKYKPDRGKVLSAAELESAK"
     gene            complement(1237..>1886)
                     /locus_tag="VIQ99_09585"
     CDS             complement(1237..>1886)
                     /locus_tag="VIQ99_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011642290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY9183439.1"
                     /translation="FGPKNIIWAVQHGHQAAISIHKHCEGTSLTERLPRGVTLTTTKM
                     GIHEWSYSNAYEPAERRVMPHVDLVKRFKKLDIEVELGFSAEQIATEVERCLNCDVHT
                     VFTPKLCIECDACIDICPVDCLAIAQNGTEAELTGRLKAARLEPSQPLFVSGPLQQTG
                     RVMLKDENLCVHCGLCAERCPTGAWDMQKSTISIPYARDEARPGEEEWQSSRKAG"
BASE COUNT          313 a          632 c          580 g          361 t
ORIGIN      
        1 tcttggccga ctcgagctcc gcggccgaca acaccttgcc gcgatcgggc ttgtacttcg
       61 ggtcccaatc gaggtcgcgg cacagccaat cgttcatgcc gatgtcgagg tcggacagca
      121 cgatcacggg cgtctgcagc cgatccgcga ggtcgaacgc ctcgacggcc atctcgaagc
      181 actcgcgcgg atcgcgcggg aacaacagca cgtgcttcgt gtcgccgtgc gacgcatacg
      241 ccgcggccag catatccgcc tgctgcgtgc gtgtcggcat gcccgtcgac ggcccgaccc
      301 tctgcacgtc gaacagcacg gccggcagct ccgtgaaata cgcgaacccc aagaactcgc
      361 ccatcagcga cagacccggc ccgctcgtcg gcgtgaacgc gcgagctccg ttccaggtcg
      421 cgccgagcac gataccgatc gcggcgagct cgtcctcggc ttgcacgatg cagtagcggc
      481 gctcgccgga ctgcgcgtct ttgcggtagc gctcgcagaa ggtcttgaac gcgtccatca
      541 gcgaggtcga aggcgtgatc ggataccagg ccccgaccgt ggcgcccgcg tacacgcagc
      601 cgagcgcggc cgccgtgttg ccgtcgatca tgatgtggcc cgcggttttg ttcatcggcc
      661 tgacgcgcag cggcagcgga catgtcaggt tcgcgcacgc gtactcgaaa cccaagtcga
      721 tcgctttctg attcgattcg atcagcgcgg gcttgcgcgc gaacgtctcc tgcacgagct
      781 ggccgatcac accccggtcg agctcgagca acgccgcgag cacgccgacg tacgccatgt
      841 tcttcatcag aatccgcgtg cgcgcgtcct tgaactgctc gttgcacatg cgcgcgagcg
      901 gcacgccgag gatgtcgatg tcgtcgcgca ccagttggcg gtcgcgcggc cacgtcgagt
      961 cgtagatcaa aacgccgccc ggagcgacct cctcgaggtc gcgcaggtag gtctgcgcgt
     1021 tcatcgcgac catgatgtcg acttgacccg agcgcgcgag atagccctcc ttgctcacgc
     1081 ggatctcgta ccatgtcggc aatccctgga tgttcgacgg aaagaagttc ttgccgctga
     1141 cggggatgcc catgcggaag accgtcttca tcaccagcga gttggcactg gcggagccgg
     1201 tgccattgac gttcgcgatc ttgaggacga agtcgtttac ccggcttttc tgctgctttg
     1261 ccactcttcc tcgccaggtc gtgcttcgtc gcgcgcgtac ggaatcgaaa tcgtcgattt
     1321 ctgcatgtcc cacgcaccgg tcgggcatct ctccgcacag agcccgcagt gcacgcacag
     1381 gttctcgtct ttcagcatca cgcgtccggt ttgctgcaac gggccggaca cgaacagcgg
     1441 ttgggacggc tcgaggcgcg ccgccttgag gcggcccgta agctcagcct ccgtgccgtt
     1501 ttgcgcgatc gcgaggcaat cgacgggaca aatgtcgatg caggcgtcgc attcgatgca
     1561 gagcttcggc gtgaacaccg tgtgcacgtc gcagttcagg caccgctcga cctctgtcgc
     1621 gatctgctcc gcactgaaac cgagctcgac ctcgatgtcg agcttcttga accgcttcac
     1681 gagatccacg tgcggcatga cccttcgctc tgccggctca tacgcgttgc tgtagctcca
     1741 ctcgtggatg cccatcttcg tggtcgtgag cgtcacgccg cgcggcagcc gctccgtgag
     1801 actcgtgccc tcgcagtgct tgtggatcga gatcgctgct tgatgaccgt gttgcacggc
     1861 ccagatgatg ttcttcgggc cgaatg
//
LOCUS       DATCUD010000660         2370 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_41861, whole genome shotgun sequence.
ACCESSION   DATCUD010000660 DATCUD010000000
VERSION     DATCUD010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41861"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="VIQ99_09590"
     CDS             <1..703
                     /locus_tag="VIQ99_09590"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF013113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9183440.1"
                     /translation="RAVLKRLERQLDLSARSVSGQTLGEILAATTVTDERTIATLDKP
                     LSKRPAIVIVRGSLLPGGGIVRLGGIGERMLEFRGKANIFHSRDEALAAIKAGRVHPG
                     DVVVLRGLGVIGGPGMAMTSAVIFALDGAKLLDRVAAITEGQLSGLVNNGLVVGEASP
                     EAAAGGPLALVDNGDTISIDVRRKTVDLEVPDAVLAERRKIARSFGAHNQRGWLGVYQ
                     RTVAPVHEGAVLKGQ"
     gene            772..897
                     /locus_tag="VIQ99_09595"
     CDS             772..897
                     /locus_tag="VIQ99_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183441.1"
                     /translation="MEARIARLEAGVSHLRGDVADIKNDVRTLRDRAMARAFGWI"
     gene            939..1691
                     /locus_tag="VIQ99_09600"
     CDS             939..1691
                     /locus_tag="VIQ99_09600"
                     /inference="COORDINATES: protein motif:HMM:NF025086.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEY9183442.1"
                     /translation="MVTLTVLTSAVFAQRGFRRGYAPAPDQPLVGEPREWTFARLAYD
                     GSGYAGGSRWPVDYPGAEYHFSQAVERLTRIDVHPEGHVVSPDSDELFDYPWLYAVEV
                     GSWAFSDSQATRMREYLLRGGFLMVDDFHGEYEWQIFMEGMRAIFPDRPVEDVPADEP
                     LYSLAYEIGERLQVPGPNYMWSGMIYERSDGVTPHWRGIRDDDGRWMVMISHNIDYGE
                     GWEQADNPAYPEAFTGQAYEVTVNYLIYAMTH"
     gene            complement(1745..>2370)
                     /locus_tag="VIQ99_09605"
     CDS             complement(1745..>2370)
                     /locus_tag="VIQ99_09605"
                     /inference="COORDINATES: protein motif:HMM:NF021778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEY9183443.1"
                     /translation="LDTENVHQATDVFVDTDANEVYAADGYGNKRVIVFDSETGMFKR
                     MWGAFGNPPPATFAANAPTPQPQTTPDGPPEFGLPHAIKVSRDGVVYVADRINNRIQM
                     FTREGRFLRQVRVTNEGSDVVPVPAGFAFSPDSNQQFLYVVDSGPMRVVIFDREAMTQ
                     IGVVGSRGKNAGEFDIVHHMAVDSKGNLYTAEIVNNRRAQKFVLARP"
BASE COUNT          388 a          773 c          798 g          411 t
ORIGIN      
        1 ccgcgcggtg ttgaagcggc tcgagcggca gctcgacctc tcggcgcgct cggtatcggg
       61 ccagacgctc ggcgagattc tcgcggcgac gaccgtcacc gacgagcgca cgatcgcgac
      121 gctggacaag ccattgtcga agcggcccgc gatcgtgatc gtgcgcggca gcctgctgcc
      181 gggcggcggc atcgtgcggc tcggcggcat cggcgagcgg atgctcgagt tccgcggcaa
      241 agcgaatatc ttccactcgc gcgacgaggc gctcgccgcc atcaaagccg ggcgcgtgca
      301 tcccggcgac gtcgtcgtgc tgcgcggctt gggcgtgatc ggcgggccgg gcatggcgat
      361 gacgtcggcc gtgatcttcg cgctcgacgg cgcgaagctg ctggaccgtg tcgccgcgat
      421 cacggagggc cagctgtcgg gactggtcaa caacggcctc gtggtcggcg aggcttcgcc
      481 cgaggccgcg gccggcgggc cgctcgcgct cgtcgacaac ggcgacacga tctcgatcga
      541 cgtgcgccgc aagaccgtcg acctcgaggt gcccgacgcc gtgctcgcag agcggcgcaa
      601 gatcgcgcgc tcgttcggcg cgcacaacca gcgcggttgg ctcggcgttt accagcgcac
      661 ggtcgcgccc gtgcacgagg gcgccgtgct caagggccaa taacgcactg gacttcgaca
      721 caagtcgagg acatagaatg ggctgcgaaa tcggtcttga cggaggtcac cgtggaagca
      781 cgcattgctc ggctcgaagc cggtgtttcg cacctgcgcg gtgacgtcgc cgacatcaag
      841 aacgatgttc gaacgttgcg cgatcgcgcg atggcgcgcg cattcggatg gatctagggg
      901 actcggcacc gtccaggcga atacgcctga tcgtcgccgt ggtgacgctc accgtgctga
      961 cgtcggccgt gttcgcgcag cgcggctttc gccgcggcta cgcgcctgcg ccggaccaac
     1021 cgctcgtcgg cgagccgagg gaatggacgt ttgcgcggct tgcgtatgac ggctccggct
     1081 atgccggggg tagccgctgg ccggtcgact atccgggcgc cgagtaccat ttctcgcaag
     1141 cggtcgagcg gttgacgcgc atcgacgttc acccggaagg ccacgtggtc agcccggact
     1201 ccgacgaatt gttcgattat ccctggctct atgccgtcga ggtcggatcg tgggcgttca
     1261 gcgactctca ggcgacgcga atgcgcgagt atctgctccg cggcggcttc ctcatggtcg
     1321 acgattttca cggcgagtac gagtggcaga tcttcatgga gggcatgcgg gcgatcttcc
     1381 cggatcggcc ggtcgaggac gtcccggcgg acgaacccct ctactcgctg gcgtatgaga
     1441 tcggcgagcg tctccaagta cccggcccga attacatgtg gtcagggatg atctacgaac
     1501 gatccgatgg cgtgacaccg cattggcgcg gcattcgaga cgacgacggg cgctggatgg
     1561 tcatgatctc gcacaacatc gactacggcg aaggctggga acaggcggac aacccggcct
     1621 acccggaggc cttcacgggc caagcctacg aggtcacggt caattacctg atctacgcga
     1681 tgacgcactg acgcgccgcg aatcctccgc gcggggttct cgaaaccggc ggggcttcgt
     1741 tcagctacgg tcgcgccaac acgaacttct gagcgcggcg gttgttcacg atctcggccg
     1801 tgtagagatt tcccttcgag tcgaccgcca tgtggtgcac gatgtcgaac tcgccggcgt
     1861 tcttgcccct cgagccgacg acgccgatct gcgtcatcgc ctcgcgatcg aagatcacca
     1921 cccgcatcgg ccccgagtcg acgacgtaca ggaactgctg gttcgagtcc ggcgagaatg
     1981 caaagcccgc cggaaccggc acgacgtcgc tgccctcgtt cgtcacgcgc acttgcctca
     2041 agaacctgcc ctcgcgcgtg aacatctgga ttcggttgtt gatccggtcc gcgacgtaaa
     2101 ccacgccatc gcgtgacacc ttgatcgcgt gcggcaggcc gaactcgggc ggaccgtcgg
     2161 gcgtcgtctg cggttgcggc gtcggggcgt tagcagcgaa cgtcgccggc ggcgggttgc
     2221 cgaacgcgcc ccacatccgc ttgaacatcc cggtctccga gtcgaacacg atcacgcgct
     2281 tgttgccgta gccgtcggcc gcatagacct cgttcgcgtc cgtgtcgacg aacacgtcgg
     2341 tggcctgatg cacgttttcc gtgtcgagat
//
LOCUS       DATCUD010000661         1523 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34776, whole genome shotgun sequence.
ACCESSION   DATCUD010000661 DATCUD010000000
VERSION     DATCUD010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34776"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1302)
                     /locus_tag="VIQ99_09610"
     CDS             complement(<1..1302)
                     /locus_tag="VIQ99_09610"
                     /inference="COORDINATES: protein motif:HMM:NF013720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HEY9183444.1"
                     /translation="MAKNLEEAIREAGSPVKLLWESKTPPAVVPRVVQEFTNWRDEQL
                     AWRRTAVLFDQSHHMADLNIKGPDALKLISKLAVNSVAKFPVDMAKQFVAVSYDGYVI
                     GDNILFHLEDDEFQAVGIPPSINWMHYHAATGGYDVRVWRDDNSLYRKGDPVLYRYQV
                     QGPGAMNVIREATGQEPPKLRFFHMTRLKIAGKEVRALRHGMAGEPGLEMWGPWKDND
                     VVHAALLEAGKKHGLIQVGGRAYHTNALESGWLPRPLPAIYTGEKMKPYREWLTESAY
                     ETTSPLGGSFHSDNIEDYYFTPYELDYGRIIAFDHDFIGRAALEKMVSEGKAERRKKV
                     TFVWNGDDTAAAYGSMFHKGRGAKFINLPMSLYDTFHADRVEANGKVVGLSTWTGYSA
                     NERAILSLGTIDTKLATPGTEVTLVWGEDKPSSKAQVEDHVP"
BASE COUNT          266 a          497 c          461 g          299 t
ORIGIN      
        1 cggcacgtga tcttcgacct gcgccttcga ggatggcttg tcttcgcccc acacgagcgt
       61 gacctcggtg cccggcgtcg cgagcttcgt gtcgatcgtg ccgagcgaca ggatcgcgcg
      121 ctcgttcgcg gagtacccgg tccacgtcga aagcccgacc accttgccgt tcgcctcgac
      181 acggtccgcg tggaacgtgt cgtaaagcga catcggcaga ttgatgaact tcgcaccgcg
      241 acccttgtgg aacatcgagc cgtaagccgc agcggtgtcg tcgccgttcc agacgaacgt
      301 gaccttcttg cggcgctccg ccttgccttc cgagaccatc ttctcgagag ccgcgcggcc
      361 gatgaaatcg tggtcgaaag cgatgatgcg gccgtagtcg agctcgtacg gcgtgaagta
      421 gtagtcctcg atgttgtcgg aatggaagct gccgccgagc ggggacgtcg tctcataggc
      481 gctctcggtc aaccattcgc gatacggctt cattttctcg cccgtgtaga tcgccggcag
      541 cgggcgcggc aaccagccgg attcgagtgc gttcgtgtgg taagcgcggc ccccgacctg
      601 aatcagccca tgcttcttgc cggcctcgag caatgccgca tgaacgacgt cgttgtcctt
      661 ccacggtccc cacatctcga gcccgggctc gccggccatg ccgtggcgca acgcgcgaac
      721 ttccttcccg gcgatcttca ggcgcgtcat gtggaagaag cgcagcttcg gcggctcctg
      781 ccccgtcgct tcgcggatca cgttcatcgc accgggcccc tggacctggt agcggtacaa
      841 gaccggatcg cccttgcgat acagcgagtt gtcgtcgcgc caaacgcgca cgtcgtagcc
      901 gcccgtagcc gcgtgatagt gcatccagtt gatcgacggc ggaataccga ccgcttggaa
      961 ctcgtcgtct tcgaggtgga acagaatgtt gtcgccgatc acgtagccgt cgtagctcac
     1021 ggccacgaac tgcttcgcca tgtcgaccgg gaacttcgcg acgctgttga cggcgagctt
     1081 gctgatcagc ttcagcgcat cggggccctt gatgttcaag tcggccatgt ggtgcgactg
     1141 atcgaacagg accgcggtgc ggcgccaagc cagctgctcg tcgcgccagt tcgtgaattc
     1201 ttgcacgacg cgcggcacca cggccggcgg cgtcttcgat tcccacagca gcttgaccgg
     1261 actaccggcc tcacggatcg cttcttccag attcttcgcc acgttacctt cactccggtt
     1321 gtccaggacg cggcgttgct cagaggcgat accgcagcgc gattctacga taagacgccc
     1381 ctaaatccct cggtagcagc ggctctgcta gtgtatgcag cgctacgacc gcaaacgcgg
     1441 agaacgagaa cgaatcaacg cgagccgggg gcgatgccga tgagatctcg agtaacgagc
     1501 tgtctaccga tcctgctgag cct
//
LOCUS       DATCUD010000662         1798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_20609, whole genome shotgun sequence.
ACCESSION   DATCUD010000662 DATCUD010000000
VERSION     DATCUD010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20609"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="VIQ99_09615"
     CDS             complement(<1..289)
                     /locus_tag="VIQ99_09615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEY9183445.1"
                     /translation="MTVSPRRELSLAHLTVLDATPPELVTVAAAAGFRMVGLRLTATP
                     SVGVPPYDMLGNTPVMRETLRRLADTGVSVLDVEFLRFEPETPIGIPEGFLE"
     gene            complement(295..846)
                     /locus_tag="VIQ99_09620"
     CDS             complement(295..846)
                     /locus_tag="VIQ99_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019428414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY9183446.1"
                     /translation="MARVPYLDQSDLPAEHQDLLARNINLFRAMAHSPNGARAFHGLG
                     EFIRHRSRLDPRLRELAILQVGYLTKSVYEYTHHIKIGRDFGVSDDDIRAIAAETAGR
                     PSGLEPLARTVLRAAREMTQGFAISDDTFAALQRNLDHERLTDLVITIAFYNGVVRFL
                     ATMQIDNEPEYQSFLADFPFAKD"
     gene            complement(871..1722)
                     /locus_tag="VIQ99_09625"
     CDS             complement(871..1722)
                     /locus_tag="VIQ99_09625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006390812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY9183447.1"
                     /translation="MGVGAQLEVLLGGLRFPEAPRWRDGKLWFSDFYAHRVVTVDADG
                     RDETIVKVPQRPSGLGWTPAGDLLVVSMLDRRLLRFDGKALHPYADLSALATGPCNDM
                     VVDAAGRAYVGNFGYDRHNNAPPRDTRIIRVDPDGRAASIGDELVFPNGMVITPDGQT
                     LIVGETFANRLTAFDVGADGALSNRRVFAQLDGVFPDGICLDAEGAVWVTNPRGNRVV
                     RVLRGGRIAETVATGERGSYACMLGGPDRRTLFVLTNTGSGPAMAEKSDGRIEMVRVD
                     VPGAGLP"
BASE COUNT          284 a          594 c          635 g          285 t
ORIGIN      
        1 cctcgagaaa tccttcgggg atgccgatcg gggtctcggg ctcgaaacgg aggaactcca
       61 cgtcgaggac ggatacgccg gtgtccgcga gccgccgcag ggtctcccgc atgaccggcg
      121 tattgcccag catgtcgtac ggcggcacgc cgacgctggg cgtggccgtc agccggaggc
      181 cgaccatccg gaaccccgcg gccgccgcga cggtgacgag ctcgggcggc gtcgcgtcga
      241 gaaccgtcag gtgcgcaagc gagagctcgc ggcgcggcga gacagtcata cggatcagtc
      301 cttcgcgaag gggaagtcgg cgaggaagct ctggtattcg ggctcgttgt cgatctgcat
      361 ggtcgcgagg aaacgcacga cgccgttgta gaaggcgatc gtgatgacga gatcggtaag
      421 ccgctcgtga tcgaggttgc gttgcagcgc ggcgaaggtg tcgtccgaga tcgcgaatcc
      481 ctgcgtcatc tcgcgtgccg ccctcagcac cgtccgggcc aggggctcga ggccactcgg
      541 tcggccggcg gtctccgcgg cgattgcgcg aatgtcgtcg tcggacacgc cgaaatcccg
      601 gccgatcttg atgtgatgcg tgtactcgta gaccgacttc gtgaggtagc cgacctgaag
      661 gatcgcgagc tcgcgcaggc gcgggtcgag ccggctccgg tggcggatga actcgccgag
      721 cccgtggaac gcgcgagcgc cgttcgggct gtgcgccatc gcccggaaga ggttgatgtt
      781 ccgcgcgagc agatcctggt gctccgccgg caggtcggac tggtcgagat aggggacgcg
      841 cgccatcgtt cacctgaaat cggaatcgcc ctacggcagg ccggcaccgg gcacgtcgac
      901 ccggaccatc tcgatgcgtc cgtcggactt ctccgccatc gccggcccgc tcccggtgtt
      961 cgtcagcacg aacagggttc gccggtcggg gccgccgagc atgcaggcat aggagccgcg
     1021 ttcgcccgtc gcgactgtct ccgcgatccg gccgcctcgg aggacccgga ccacgcgatt
     1081 gccacgggga ttcgtgaccc agacggcgcc ttcggcatcg aggcagatgc cgtcggggaa
     1141 tacgccgtcg agttgcgcga agacgcggcg attgctcagc gcaccgtcgg cgccgacgtc
     1201 gaacgcggtg agccggttgg cgaaggtctc gccgacgatc agcgtctgcc cgtcgggcgt
     1261 gatcaccatg ccgttcggaa agacgagctc gtcgccgatg ctcgccgcgc ggccgtcggg
     1321 gtcgacgcgg atgatgcgcg tgtcccgtgg cggcgcgttg ttgtgccggt cgtaaccgaa
     1381 attgcctacg taggcccggc ccgcggcatc caccaccatg tcgttgcagg gaccggtcgc
     1441 gagagccgac aggtcggcat agggatgcag cgccttgccg tcgaatcgca gcaggcgccg
     1501 gtccagcatc gagacgacga gcaggtcccc cgccggcgtc catcccagcc ccgatgggcg
     1561 ctgcgggacc ttcacgatgg tttcgtcgcg cccgtcggca tcgacggtca cgacccggtg
     1621 ggcgtagaaa tcggagaacc agagcttgcc gtcgcgccag cgcggcgcct cgggaaacct
     1681 caggccgccg agcaggacct cgagttgcgc tcccacgccc atcgcactcc cctttccttt
     1741 cgagcggcgt cacggcacct gcggcgtata tacttcccgg aggggtgtgt caatcgcg
//
LOCUS       DATCUD010000663         3514 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56202, whole genome shotgun sequence.
ACCESSION   DATCUD010000663 DATCUD010000000
VERSION     DATCUD010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3514)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3514)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3514
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56202"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="VIQ99_09630"
     CDS             <1..787
                     /locus_tag="VIQ99_09630"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY9183448.1"
                     /translation="AETEHEAPTPTPAAATEAAPAQPVLEQDLAYGEGVRSNLVGFLA
                     LPADAAEPLPGVIVIHEGWGLDDNIKAMTRRLASEGYVALAVDLYGGQTADTPERAQE
                     LMIALLNEPEVARRNLSQAYDYLDKYAFAPRIASIGWDLGGSWALQTALLFPDMLDAV
                     VMYYGQVDTNSDRLATLEMPLLGFFGGEDASIPIRDVQAFRTTLGQLGKNAEVLIVPG
                     VGHAFANPSGGSFDQRAADEAWAKTLAFLEHNLKLSVPSQPPQ"
     gene            complement(995..1249)
                     /locus_tag="VIQ99_09635"
     CDS             complement(995..1249)
                     /locus_tag="VIQ99_09635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183449.1"
                     /translation="MVARTLLTASAALLSVGLLAQHATGSEAPVVHKTPVIAEFKVDV
                     EAIRKDLDAHVRELNERLRQDLHRELSKTVLASNELRSRL"
     gene            1445..3268
                     /locus_tag="VIQ99_09640"
     CDS             1445..3268
                     /locus_tag="VIQ99_09640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018294532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY9183450.1"
                     /translation="MSQQEQYQWLFRRSPALIVSLNEDGFFVDASDAWLRRFGYGREE
                     ITNMRPQDLASPESAKRIVEEYLPVLRRTGRLAGVPVDLVTRSNERVDCLANAIVELS
                     ETGDYLRTMAVYTEVGEQARLEQHYRELYRATPAMLHTVDNYGRITNVSDRWLQTLGY
                     RREEVLGRIITEFMGKEMQVTLAGSRLEDVIATGELDNEPRTYVTRSGEVLEVEVSAT
                     ADRDPSGAVVALLVASKDVTARNRAERQLRAAFEENARLRDELERERDYLREEVQVSM
                     NFGRIIGESPALKQMLARVEAVAQTSASVLIEGESGVGKELVAHVIHARSSRSQGPLV
                     KVNCASIPHELFESEFFGHVKGAFTGAHRDRVGRFQLADGGTIFLDEVGEIPLDLQSK
                     LLRVLQESEYERVGDDRTHSVDVRVIAATNRDLEKAVAEGTFREDLFYRLSVFPIEVP
                     PLRARGDDVIQIASHFLERTCQEFGHRPLTLSKQQAALLKRYEWPGNIRELKNVIERA
                     VILSRGKVLRLDLAMSDILNAPTATANEANEETNKLLTEAEVRELERKNTLLALEMSA
                     WKVSGPNGAAKLLGIKPTTLADRIKKFELAKGRSRRTGDSP"
BASE COUNT          677 a         1067 c         1157 g          613 t
ORIGIN      
        1 ggccgagacc gagcacgagg cgccgacgcc gacgcccgcc gcggcgaccg aagccgcgcc
       61 cgcacagccg gtgctggagc aagacctcgc gtacggcgag ggcgtgcgca gcaatctcgt
      121 gggcttcctc gcgctgccgg ccgacgcggc cgagccgttg ccgggcgtga tcgtgatcca
      181 cgaggggtgg gggctcgacg acaacatcaa ggcgatgacg cgacgactcg cgagcgaggg
      241 atacgtcgcg ctcgccgtgg acttgtacgg cggccagacc gccgacacgc cggaacgtgc
      301 gcaggagttg atgatcgcgt tgctgaacga gcccgaggtg gcccgacgca acctgagcca
      361 ggcctacgat tacctcgaca agtacgcgtt cgcaccgcgg atcgcgagca tcgggtggga
      421 cttgggtggc agctgggctt tgcagacggc cttgctgttc ccggacatgc tcgacgcggt
      481 ggtcatgtac tacggtcagg tggataccaa cagcgaccgt ctcgcgacgc tcgagatgcc
      541 gctgctcggc ttcttcggcg gcgaggacgc gagcatcccg atccgcgacg ttcaagcgtt
      601 tcggaccacg ttgggccagc tcggcaagaa tgccgaagtg ttgatcgttc ccggtgtggg
      661 ccacgcgttc gcgaatccga gcggtggcag cttcgaccag cgggctgccg acgaagcttg
      721 ggcgaagacg ctggctttcc tcgagcacaa tctgaagctg tcggtgccga gccaaccgcc
      781 gcagtagatt tccacgcggg ggcgctcgag ggccgcggcg cgctcgggca ggctggaaaa
      841 aatggagccg ggctgcggaa cgtccttatc cttcgttgcg aagtgtccgt gttcgccgcc
      901 ggaaacccgg ccccctcaat acggccgtcc gactcggcca acgggccacc acggggggag
      961 aagtggtggg ccgtctgttt ttaccgtcta acccctagag cctcgagcgc agctcgttgc
     1021 tggccagcac ggtcttcgac agctcgcgat gcaggtcctg ccgcaatcgc tcgttgagct
     1081 cgcggacgtg ggcgtcgaga tccttgcgga tggcctcgac gtcgaccttg aactccgcga
     1141 taaccggggt cttgtggacc accggagctt cggagcctgt cgcatgctgt gcgagcaggc
     1201 ccacggacag tagagcggcg gaggccgtca acagcgttcg tgcaaccata ctcttcgatc
     1261 ctttaccgat ttctcggcac tggggcgatc tcgacatgag atcccctcgc agactcctat
     1321 tgcagataac gtgccagacc gagatttata aaaatcaaaa ggttacgcta cccgcgatta
     1381 acgacaatcc gtaaaatacg gttttccgtt gaatcgtgat acggaagtcc gtaaagtcgt
     1441 cgttatgtcg caacaagagc agtaccaatg gcttttccgc cggagcccgg cgctgatcgt
     1501 ctctctgaat gaggacggtt ttttcgtcga cgccagcgac gcctggttgc ggcgttttgg
     1561 ctacgggcgt gaagaaatca cgaacatgcg gccgcaggac ctcgcgagtc ccgagagcgc
     1621 caaacggatc gtcgaagagt acctgcccgt gttgcgtcga accggccgtc tcgcgggcgt
     1681 gcccgtggat ctcgtgacgc gcagcaacga gcgggtcgac tgcctcgcga atgcgatcgt
     1741 cgagctcagc gagaccggcg attacctgcg cacgatggcc gtgtacacgg aagtcggcga
     1801 gcaggcgcgg ctcgagcagc attatcgcga gctgtatcgc gcgacgcccg cgatgctgca
     1861 caccgtcgat aactacggtc gcatcacgaa cgtcagcgac cgctggctcc aaacgctcgg
     1921 ttaccgacgc gaggaggtcc tcggccgcat catcaccgag ttcatgggca aggaaatgca
     1981 ggtcacgctc gccggcagcc gcctcgagga cgtgatcgcg acaggcgagc tcgacaacga
     2041 gccgcgcacc tacgtgacga ggtcgggcga ggtgctcgag gtcgaagtgt ccgcgacggc
     2101 cgatcgcgac ccgagcggcg ccgtcgtcgc gttgttggtc gcgtcgaagg acgtcacggc
     2161 ccggaatcgc gccgaacgtc agctacgcgc cgcgttcgag gagaacgcgc ggttgcgcga
     2221 cgagctcgag cgcgaacgcg attacttgcg cgaggaagtg caggtctcta tgaacttcgg
     2281 ccgtatcatc ggcgagagtc ccgcgttgaa gcagatgctg gcgcgggtcg aggccgttgc
     2341 gcagacctct gcgagcgtgc tgatcgaggg cgagtccggc gtcggcaagg agctcgtcgc
     2401 gcacgtgatt cacgcgcgca gctcgcgaag ccaagggccg ctcgtgaagg tcaattgcgc
     2461 gtcgatcccg cacgagctgt tcgagagcga gttcttcggc cacgtcaaag gcgccttcac
     2521 cggcgcgcac cgcgaccgcg tcggccggtt tcagctggcc gacggcggta cgatcttcct
     2581 cgacgaagtc ggcgaaatcc cgctcgacct tcagagcaag ctgctgcgcg ttctgcaaga
     2641 gagcgagtat gagcgcgtcg gcgacgatcg cactcacagc gtcgacgtgc gcgtgattgc
     2701 ggcgacgaac cgcgatctcg agaaggccgt cgctgaagga acctttcgcg aggacttgtt
     2761 ctatcgcctg agcgtctttc caatcgaggt gccgccgttg cgcgctcgtg gtgacgacgt
     2821 gatccagatc gcgagtcatt ttctcgaacg cacgtgccaa gagttcggcc atcgaccgct
     2881 gactctgtcg aagcagcagg cggcgctgct gaagcgctat gagtggcctg gcaacatacg
     2941 cgagctcaag aacgtgatcg agcgcgccgt gattctgtcg cgaggcaaag tcctacggct
     3001 cgatcttgcg atgagtgaca tcctgaatgc accgactgcc acggcaaacg aagccaacga
     3061 ggaaacgaac aagcttctga cagaagcgga ggttcgggag ctcgagcgca agaacacctt
     3121 gctcgcgctc gagatgtcgg cctggaaggt ttccggcccg aacggtgcag cgaagttgct
     3181 cggcatcaag ccgacgacgc tcgccgaccg gatcaagaaa ttcgagttgg cgaagggccg
     3241 ctcccgccga accggcgaca gtccgtgaag tggcagagta ttagttgatc actcatgggc
     3301 ttgcagaggc ttgttggagt ctggtatatg agtatgtaaa accgggtgca ccgttaagtg
     3361 cccggcgggc caacaaaaac agaactacaa ggctccagca tggcaatggt cacagactgt
     3421 ttcgccgacg ccgttcagac cctgatcggt gacggatcca tcaagcaacg tttggtcgct
     3481 gcgttcggga gccacttggg cgaggtcgcc gacg
//
LOCUS       DATCUD010000664         1988 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70558, whole genome shotgun sequence.
ACCESSION   DATCUD010000664 DATCUD010000000
VERSION     DATCUD010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1988
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70558"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VIQ99_09645"
     CDS             complement(<1..330)
                     /locus_tag="VIQ99_09645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthomonadin transporter"
                     /protein_id="HEY9183451.1"
                     /translation="MKRGVTALSLLAFWVAGLGVGGAFIARQLKIVSDLRLFLPSPTT
                     PEQRLLLDAIGEGPASRLLVITLEGAEPEALADASRALVDALRGDERFRFVANGDTPS
                     DSLPEAWL"
     gene            complement(327..965)
                     /locus_tag="VIQ99_09650"
     CDS             complement(327..965)
                     /locus_tag="VIQ99_09650"
                     /inference="COORDINATES: protein motif:HMM:NF039988.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LolA-related protein"
                     /protein_id="HEY9183452.1"
                     /translation="MRHRTTTPARAALLVLLLTATSATGAPDSAELIARLAREPPTTV
                     AFVEVRFSSLLVEPLVVGGELDYESGKTLRRRVETPYRETTTISGDTVRVERDGESRT
                     LALRRAPELRGLLMGMVGLLGGDAAFLNQHFAITAIGDEATWQLDLAPTDDRVRQRLR
                     AITATGIAVEPRCFVIHDTQGGASVMLLGAAAARSLPQPVALAELLASCSAE"
     gene            1074..1400
                     /locus_tag="VIQ99_09655"
     CDS             1074..1400
                     /locus_tag="VIQ99_09655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183453.1"
                     /translation="MRVLVVSLGVGLFAIGAPAFAADQIIKLSECGLSNEAFREAAEY
                     SFTKRRYNIEENTPTLVVGEQDDKRVEIVIEPDQVVIRWKEGFGSKNDQWLRNLKTDV
                     LWRLAE"
     gene            complement(1411..>1988)
                     /locus_tag="VIQ99_09660"
     CDS             complement(1411..>1988)
                     /locus_tag="VIQ99_09660"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008171 - O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY9183454.1"
                     /translation="SAFPAALSHVFALKPRNLLDIGGNTGLWAQACVEHDPHVEVTIV
                     DLPEQARLTQERLGTTPHAARIHVRAVDLLDASATLPGGADVVWLSQLLDCFSEQQAA
                     QILRRAATSLRAGGSIFVLELLWDRQRYDAASYSLNATSLYFTCIANGVSRMYRSDDL
                     LRIIREAGLEVAAEHDQIGRGHTLLHCRRPS"
BASE COUNT          353 a          618 c          680 g          337 t
ORIGIN      
        1 cagccaagct tcgggtagcg agtcggacgg tgtgtcgccg ttggcgacga agcgaaagcg
       61 ctcgtcgccg cgcagcgcgt cgaccagtgc gcgcgaggcg tccgcaagcg cttcgggctc
      121 ggccccttcc agcgttatga cgagcagccg cgacgcggga ccttccccga tcgcgtcgag
      181 cagcaagcgc tgctcgggcg tcgtgggcga gggtaagaac aaccggaggt ccgaaacgat
      241 tttgagctgc cgcgcgatga aggctccgcc gacgccaagg cccgcgaccc aaaacgcgag
      301 cagcgacagg gccgtgacgc cgcgtttcat tccgcgctac acgaggcgag cagctcggcg
      361 agtgcgaccg gttgcggcaa cgaccgagcg gctgccgcac cgagcagcat cacgctcgcg
      421 cctccttgcg tgtcgtgaat cacgaaacac cgcggctcaa cggcgatacc ggtggccgtg
      481 atcgcccgta aacgttgtcg cactctgtcg tcggtgggcg cgagatcgag ttgccacgtt
      541 gcctcgtcgc caatcgcggt gatcgcgaaa tgttggttca gaaacgcggc gtcgccgccg
      601 aggaggccaa ccatgcccat cagtaatccg cgcagctcgg gcgcgcggcg caacgcgagc
      661 gttcgcgact cgccgtcgcg ctcgacgcgc acggtgtcgc cgctgatcgt cgtggtttcc
      721 cgatacgggg tctcgacgcg gcggcgcaga gtcttgccgc tttcgtaatc gagctcgcca
      781 ccgacgacga gcggctctac gagcaacgaa gagaagcgca cctcgacgaa cgctacggtc
      841 gtcggtggct cgcgcgcgag ccgtgcgatc agctcggcgc tgtccggtgc acccgtcgcg
      901 gaggtcgcag tcagcagcaa gaccagcagt gccgctcgcg cgggagtcgt cgtgcggtgt
      961 cgcatgtgtc gcgcttcggc ctcgcccaaa tggggcccca gtcatgcgga gcgtcggcgc
     1021 acagtatata gtcggtgccg ttcgttatct tgaagacaac cggagagtgt gcgatgcgcg
     1081 tattagtggt gagtctcggt gttggcctct tcgcgatcgg ggcccctgcg tttgcggctg
     1141 atcagatcat caagctgtcg gagtgtgggt tgtcgaatga agctttccgc gaggctgccg
     1201 agtacagctt cacgaagcgt cgctacaaca tcgaagagaa cacgccgacg ctggtggtcg
     1261 gagagcagga cgacaagcgc gtcgagatcg tgatcgagcc ggatcaggtc gtgatccgct
     1321 ggaaggaagg cttcggcagc aagaacgatc agtggctccg caacctgaag accgacgtgc
     1381 tttggcgcct cgccgaatag ccgcgcgcga tcaactcggc ctgcggcagt gcaacagagt
     1441 gtggccgcgg ccgatctgat cgtgctcggc ggcgacctcg agtccggcct cgcgaataat
     1501 gcgcagtaga tcgtcggagc gatacatgcg actgacgccg ttcgcgatgc aggtgaagta
     1561 cagcgacgtg gcgttcaagc tgtagcttgc ggcatcgtag cgttgccgat cccagagcag
     1621 ctcgagcacg aatatcgagc ctccggcgcg caggctcgtt gcggcgcgcc ggagtatttg
     1681 cgcagcctgc tgctccgaga agcaatcgag caattgactc agccacacga cgtcggcgcc
     1741 gccgggcagc gtcgcgctgg catccaaaag gtctacggct cggacgtgaa tgcgtgccgc
     1801 atgaggagtg gtgcccaggc gttcctgcgt gagacgcgcc tgctcgggca ggtccacgat
     1861 cgtgacttcg acgtgcgggt cgtgctccac gcaggcttgt gcccacagcc ccgtgttgcc
     1921 gccgatgtcg agcaggtttc gcggcttcag tgcgaataca tgcgagagtg cagccgggaa
     1981 cgcgctcg
//
LOCUS       DATCUD010000665         5235 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34807, whole genome shotgun sequence.
ACCESSION   DATCUD010000665 DATCUD010000000
VERSION     DATCUD010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5235
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34807"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..844)
                     /locus_tag="VIQ99_09665"
     CDS             complement(23..844)
                     /locus_tag="VIQ99_09665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011082943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183455.1"
                     /translation="MSESAIAKTESAARERKLAFRGGGFVIEQRTWMSVLAFVGLIGL
                     WELVTATGLVSPIFLPSPTRVVRALWDLAITGDLWRHVSASLMRIGYGWIIGTLFGVA
                     FGLMIGLFTISRAVGLPLVAALFPIPKIALLPLLILWLGIGEGSKVATIALSVFFPTV
                     IATFSGVDSVPRNLIRMAQSFNVPLWRIVLQVLVPGALAGMLAGFRISIAAALLVLVA
                     AEMIGAQYGIGAFLILTGNMMQTDRLMAGVVVVSVLGLVMSIIVSTIERRLLRWR"
     gene            complement(837..1613)
                     /locus_tag="VIQ99_09670"
     CDS             complement(837..1613)
                     /locus_tag="VIQ99_09670"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014246856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183456.1"
                     /translation="MEIALSNVTHKFGDLTALDDVSLHAHEGEIVAIIGPSGCGKSTL
                     LGIAGGILKPTAGEVVLRGVPAPDTLNEITFIFQDFSLLPWLNVRDNVAFVLKHHKLG
                     AAELERRIADALERTNLSDFATALPKQLSGGMRQRVGIARALAVRPAIFLMDEPLSAL
                     DAQTRELLLDDILALWQRDRPTILYVTHNFQEAIRLADRVCVLSRRPGRVREIIGIPI
                     PRAERPKPERQAEVAKLGERLWSLIKEEAIVADRELVAHV"
     gene            complement(1615..2640)
                     /locus_tag="VIQ99_09675"
     CDS             complement(1615..2640)
                     /locus_tag="VIQ99_09675"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9183457.1"
                     /translation="MSRWLAVLGVVAIFVGPASAAELTPVKVGVLRIASQAPFFMGVE
                     KGYFHELGVDVELVFFDAAVPATLAIASRDVDLAVIGFTPAFFNLAYFGGVVVIAGHS
                     RELPGFPNTGVFASNKAWDAGVRTMADMRGRVIGLTTIGSTNHYAVARIGEKYGFDVN
                     DNRLVPAQGLGNLAAMLMGNQVDVASGAGTAFMSLIDQGKAHVIGWAGDEISWQSTGL
                     AASPRGIAQKRVALQAIIDGYERGAAEYSAVLLDKNADGTYKDPAKAEELLALISRWT
                     SVPPKAIAQSLAYIDSRLDVGSIYEMVEWYRNQRMIERDTDPAAFIDLSFVSGHENIP
                     AALRAGH"
     gene            complement(2958..4154)
                     /locus_tag="VIQ99_09680"
     CDS             complement(2958..4154)
                     /locus_tag="VIQ99_09680"
                     /EC_number="3.4.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013413.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070573 - metallodipeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane dipeptidase"
                     /protein_id="HEY9183458.1"
                     /translation="MIALICASSAVVGQQAADLERRVAEVHAAARPLDAHADILVSTT
                     PGIYRTADGESQLTVDKLAAGGMAIVTLALQSPTGPATEEGIAKARAEVDAKLAQLLA
                     LEKAEGARLGIARSAADIERLHAAGKIAVLIGFQNAYAFGTDLSLVDRYVADGVRVFA
                     FNHAGNNAFADSSRPSVPGDEPNGGLSALGREAVRRLNDAGVVIDVSQLTPKGVMQTL
                     ELSRAPVIASHSAVRALIDETRSLTDAELDAIAAKDGVVHVPPFNTYIAPRPPEFVAA
                     LGALRAMYGLPREFHGVLDNAERLEGAARGEYTNAALKTVPRADLDDYLDHIDYVVKR
                     VGVDHVGIGTDFDHGAGIIGYKDASEARNVTRALLERGYSADDVAKIWSGNFMRVLRA
                     AEAAAR"
     gene            complement(4254..>5235)
                     /locus_tag="VIQ99_09685"
     CDS             complement(4254..>5235)
                     /locus_tag="VIQ99_09685"
                     /inference="COORDINATES: protein motif:HMM:NF014717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183459.1"
                     /translation="NGARFEGESALPLDTAAIVANAAGVARTPDGRGAVTRDLVTAVN
                     RTWRSNGSVRALAVRGVGTENFAVRPEITIVEGRTFTPGLREAIVGRSAQVQFEGLDL
                     GGEVKLRDGVWRIVGVFTTGDATEAGLIMDVDTLASAYSLGHVNSVTARLETPEAFDE
                     LKAALEANPTLAVDVYREPDYYVMDAADLDDLFFFVTYVICSIMAAGALVGALNTMYA
                     AVSSRAVEIATLRALGFGATGVVVSIVAESLTLAALGAAAGSVIAWLIFSGDSVSLGG
                     GNGTLITTLAITPETLVTGLLWAGGVGLIGALFPAMRAARLPLATALRAT"
BASE COUNT          917 a         1811 c         1705 g          802 t
ORIGIN      
        1 cgtgcagtgg tgattgttcc cgctaacgcc agcgcagcag gcggcgctcg atggtcgaga
       61 cgatgatgct catcacgagg ccgagcacgg agacgacgac gaccccggcc atcaggcggt
      121 ccgtctgcat catgttgccc gtgaggatca agaacgcgcc gatgccgtac tgagcgccga
      181 tcatctcggc ggccacgagc acgagcagcg ccgcggcgat cgagatccga aagcccgcga
      241 gcatgccggc cagcgcgccg ggaacgagga cttgcagcac gatccgccac agcggcacgt
      301 tgaagctctg cgccatccga atcagattcc gcggcacgga gtcgacgccg ctgaacgtcg
      361 cgatcacggt cggaaaaaac acgctaagcg cgatcgtcgc gaccttcgag ccttcgccga
      421 tgccgagcca caagatcagt agcggcagca gcgcgatctt cggaatcgga aacagcgctg
      481 cgacgagcgg caggcccacc gcacgggaga tcgtgaagag cccgatcatg agcccgaatg
      541 cgacgccgaa cagcgtgccg atgatccagc cgtagccgat ccgcatcagc gacgccgaca
      601 cgtgacgcca gagatcgccc gtgatcgcga ggtcccagag cgccctgacc acgcgcgtcg
      661 gtgacggcag aaagatcggg ctcacgaggc ccgtggctgt tacgagctcc cagaggccga
      721 tcagaccgac gaacgcgagc acgctcatcc acgtgcgctg ctcgatcacg aagccgccgc
      781 cgcgaaacgc gagcttgcgt tcgcgcgccg cgctctccgt ttttgctatc gccgactcag
      841 acatgcgcca cgagctcgcg atcggccacg atcgcctcct ccttgatcag cgaccagagc
      901 cgctcgccga gcttcgccac ctcggcttgg cgctcgggct tgggacgctc ggcgcgcggg
      961 atcgggatgc cgatgatctc gcgcacgcgg cccggccgcc gcgacaacac gcagacccgg
     1021 tctgcgagcc ggatcgcctc ctggaagttg tgcgtcacat acaggatcgt cgggcgatcg
     1081 cgctgccaga gcgccaggat gtcgtcgagc agcagctcgc gcgtctgcgc atcgagggcc
     1141 gagagaggct cgtccatcag gaagatcgcg gggcgcaccg cgagcgcgcg cgcgatgccg
     1201 acgcgctgcc gcatgccccc cgacagctgc ttcggcaacg cggtcgcgaa gtcgctcagg
     1261 ttcgtgcgct cgagcgcgtc ggcgatccgg cgctcgagct ccgcggcacc gagcttgtgg
     1321 tgcttcaaca cgaacgcgac gttgtcgcgg acgttcagcc acggcaacag cgagaaatcc
     1381 tggaagatga acgtgatctc gttcagcgtg tccggagccg gcacgccgcg cagcacgacc
     1441 tcgcccgccg tcggcttcag gatgccgccg gcgatgccga gcagcgtcga tttgccgcag
     1501 cccgaaggcc cgatgatcgc gacgatctcg ccttcgtgcg cgtgcagcga aacgtcgtcg
     1561 agcgccgtga gatcgccgaa cttgtgcgtg acgttcgaga gcgcgatctc catctcaatg
     1621 ccccgcgcgc aacgccgcgg ggatgttctc gtgtcccgac acgaagctca gatcgatgaa
     1681 cgccgcggga tccgtgtccc tttcgatcat gcgctgattc cggtaccact cgaccatctc
     1741 gtagatgctg ccgacgtcga gccggctatc gatgtacgcg agcgattgcg cgatcgcctt
     1801 cggcggcacc gaggtccagc gcgagatcag cgcgagcagc tcctcggcct tcgcgggatc
     1861 cttgtaggtg ccgtcggcat tcttgtcgag cagcacggcc gagtactcgg ccgcgccgcg
     1921 ctcataaccg tcgatgatgg cttgcagcgc gacgcgcttt tgcgctattc cgcgcgggct
     1981 cgccgcgaga cccgtcgact gccacgagat ctcgtcgccg gcccagccga tcacgtgcgc
     2041 cttgccctga tcgatcaagc tcatgaacgc ggtgccggcg cccgatgcca catcgacctg
     2101 gttccccatc agcatcgccg cgaggttgcc caggccctgt gcaggcacga gccggttgtc
     2161 gttgacgtcg aagccgtact tctcgccgat ccgcgcgacc gcgtagtgat tcgtggagcc
     2221 gatcgtcgtg aggccgatca ctcgaccgcg catgtcggcc atcgtgcgca cgccggcgtc
     2281 ccacgccttg ttcgatgcga acactccggt gttcgggaag ccgggcagct cgcggctgtg
     2341 gcctgcgatc acgacgacac cgccgaaata cgcgaggttg aagaacgcgg gagtgaagcc
     2401 gatcacggcg aggtctacgt cgcgcgaggc gatcgcgagc gtcgccggca cggcggcatc
     2461 gaagaacacg agctcgacat cgacgccgag ctcatggaag taacccttct cgacgcccat
     2521 gaagaacggc gcctgcgacg cgatacggag cacgccgacc ttcaccgggg taagctccgc
     2581 agccgacgcg ggccccacga atatggcgac cacgcccagc accgcgagcc atcgcgacac
     2641 gagcttcaag ccaacccccc tccgtcccgg ctaaaggacg ccctcatgaa catcaaaata
     2701 cgcggaaacc ggcgcggaag cgaatactgg tatcgcaagt actacggaca ctggacgatc
     2761 tggtgttgtg tgcgtgtagc tcgcacgagc tcgtcagggt gacgaacgat gtcggcccga
     2821 tcgtcaagcc accggacgat tgcagcggaa tcgtcggccg ccctgacgat cgcgcacaag
     2881 gacggtgtgt ctaagcgccg agctcgccct cggtgctgcc tcagacacga cacgtctacc
     2941 cgggcgaacg aaacgcctca gcgcgccgcg gcttcggccg cgcgcaatac gcgcatgaag
     3001 ttgccgctcc agatcttcgc gacgtcgtcg gctgagtaac cgcgctcgag caacgctcgc
     3061 gtgacattgc gcgcctcgct cgcatccttg tagccgatga tgcccgcgcc gtgatcgaag
     3121 tccgtgccga tgccgacgtg gtcgacgccg acacgcttca cgacgtaatc gatgtggtcc
     3181 aggtagtcgt cgagatcggc ccgcggcacg gtcttcaacg ctgcgttcgt gtactcgccg
     3241 cgcgcggcgc cttcgagacg ctcggcgttg tcgagcacac cgtgaaactc gcgcggcaag
     3301 ccgtacatcg cgcgcagcgc cccaagcgcg gccacgaact cgggcgggcg cggcgcgatg
     3361 taggtgttga acggcggcac gtgcacgacg ccgtccttcg ccgcgatcgc gtcgagctcc
     3421 gcgtccgtga ggctgcgcgt ctcgtcgatg agagcgcgca cggccgagtg gctcgcgatc
     3481 acgggcgctc gcgatagctc gagtgtctgc atcacgccct tcggcgtgag ctgcgacacg
     3541 tcgatcacga caccggcatc gttgagccgg cgcacggcct cgcggccgag cgccgatagg
     3601 cctccattcg gctcgtcgcc gggcacgctc gggcgcgacg agtccgcgaa cgcgttgttg
     3661 ccggcgtggt tgaacgcgaa cacgcgcacg ccgtccgcaa cataacgatc gacgagactt
     3721 aagtccgtgc cgaacgcgta ggcattctga aagccgatca gaacagcgat cttgcccgct
     3781 gcgtgcaagc gctctatgtc cgccgcgctg cgcgcgatgc cgagccgcgc gccttccgcc
     3841 ttctcgagcg cgagcaactg cgcgagcttc gcgtcgactt cggcacgcgc ctttgcgatg
     3901 ccctcctccg tcgcaggacc cgtgggcgat tgcagcgcca gcgtgacgat ggccatgccg
     3961 ccggcggcga gcttgtcgac ggtcaactga gactctccgt cggccgtgcg gtagatgccg
     4021 ggcgtggtcg acacgaggat gtccgcatgc gcgtcgagcg gccgcgccgc ggcgtgcacc
     4081 tcggcgacac gacgctcgag gtccgcggcc tgttgcccga ctaccgcgct cgatgcgcag
     4141 atgagtgcga tcacgctcgc acaggaaagg gtccgtcgat tcatggcgct ggctcccggg
     4201 gctgcgctga tgcacagcat cccctcgcgc cgattgtgcc tgaagcgagg ctcctaggtt
     4261 gctcgcaaag ccgtagcgag cggcagccgc gcagcgcgca tcgctggaaa cagtgctccg
     4321 atgaggccta cgccgccggc ccagaggagc ccggtgacga gcgtctccgg cgtgatcgcg
     4381 agcgtcgtga tcaaggttcc gtttccgccg ccgagactca cggagtcgcc ggagaagatc
     4441 agccacgcga tcacgctgcc ggcggccgcg ccgagcgcgg ccagggtcaa agactcggcg
     4501 acgatcgaga cgacgacgcc cgtggcgccg aacccgagcg cgcgcagcgt cgcgatctcg
     4561 accgcgcgac tgctgacggc cgcgtacatc gtgttcaggg cgccgacgag cgcgccggcc
     4621 gccatgatcg agcaaatcac gtacgtgacg aaaaaaaaca gatcatcgag atcggcggcg
     4681 tccatgacgt agtagtccgg ctcgcgatag acatcgaccg caagcgtagg gtttgcttcg
     4741 agcgccgcct tgagctcgtc gaacgcctcg ggcgtctcga gccgcgccgt gacgctgttg
     4801 acgtggccga gactgtaagc agacgcgagc gtgtccacgt ccatgatcag gccggcttcg
     4861 gtcgcgtcgc cggtcgtgaa cacgccgacg atcctccata cgccgtcgcg caacttgacc
     4921 tccccgccga gatcgagtcc ctcgaactga acctgcgcgc ttcggccgac gatcgcctcg
     4981 cggagcccag gcgtgaacgt ccgtccctcg acaatcgtga tctcggggcg gacggcgaag
     5041 ttctccgtgc cgacaccgcg caccgcgagc gcgcgcaccg agccgttgct gcgccacgtc
     5101 cgattcacgg ccgtcacgag gtcgcgcgtg acggcaccac ggccgtcggg cgtacgcgcg
     5161 acgccggccg cgttcgcgac gatggcggcg gtgtccagag gcaacgcgct ctcgccctcg
     5221 aaccgggcgc cgtta
//
LOCUS       DATCUD010000666         1518 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_98953, whole genome shotgun sequence.
ACCESSION   DATCUD010000666 DATCUD010000000
VERSION     DATCUD010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1518
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98953"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(149..994)
                     /locus_tag="VIQ99_09690"
     CDS             complement(149..994)
                     /locus_tag="VIQ99_09690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183460.1"
                     /translation="MGRFFLSAAWLVVAAVAPAHAQLSVVGEWTGRYHEDQGDRVPGD
                     VQGDFTGVPMNDAARKYAEAFDVTRVAVLEHQCQPYNVAHIYRGPIQFRMWEEKDPAT
                     QEIIAYRVYSGTYQQYRTIWMDGRAHPPAYVPHTHMGFSTGEWHGDILTVTTTHIKKE
                     FYRRSGVPSSDLTTLVEHYIRHGNVLSHVMIITDPVYLTEPYVLSQEFVLMERGNQNW
                     LYNCEYVMEVPMDKNDVPFYLPGQNPFIEDYAKLYGLPFEAVFGGAPATYPEYMPTVE
                     RLMNR"
     gene            complement(1002..1403)
                     /locus_tag="VIQ99_09695"
     CDS             complement(1002..1403)
                     /locus_tag="VIQ99_09695"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183461.1"
                     /translation="MRIRWSLILPAAALTALAGVAAAHHSFTATYFEDRTMEIEGKLL
                     QFMFRNPHSFVHVEAPDENGQLQRWAVEWGGAGQLAGQGVTNQTLRVGDVVSITGNPG
                     RDPSDHRIRMQYLRRNSDGFEWGRNPGETFN"
BASE COUNT          253 a          496 c          489 g          280 t
ORIGIN      
        1 tggacggcga cgttggcacc ggcgccgatc agcatgtgca cgttgccctg cacatggtac
       61 gtttcgaccg atccttgggc gaacgcgctc ggcgcgaggc cgcccagcgc gacgagaaga
      121 gtgagctgcc cgactcctaa gcgcacgctc atcgattcat cagccgctcg accgtcggca
      181 tgtactccgg gtacgttgcc ggcgcgccgc cgaaaaccgc ctcgaacggc aagccataga
      241 gcttggcgta gtcctcgatg aacgggttct gacccggcaa gtagaacggc acgtcgttct
      301 tgtccatcgg gacttccatg acgtactcgc agttgtagag ccagttctga ttgccgcgtt
      361 ccatgagcac gaactcttgg ctcaagacgt atggctccgt caggtagacg gggtcggtga
      421 tgatcatcac gtgcgacagc acgttgccgt gccggatgta atgctcgacg agcgtcgtga
      481 gatcgctgct cggcacgccg ctgcggcggt agaactcttt cttgatgtgc gtcgtcgtga
      541 ccgtgaggat gtcgccgtgc cactcgcccg tcgagaagcc catgtgcgtg tgcggcacgt
      601 aggccggcgg atgcgcccgg ccgtccatcc aaatcgtgcg gtactgctgg taggtgccgc
      661 tgtacacgcg gtacgcgatg atctcctgcg tcgccgggtc cttctcttcc cacatccgaa
      721 attggatcgg gccgcggtag atgtgcgcga cgttgtacgg ctggcactga tgctcgagca
      781 ccgcgacacg agtgacgtcg aaggcctcgg cgtacttgcg cgccgcgtcg ttcatcggca
      841 cgcccgtgaa gtcgccctgc acatcgccgg gtacgcggtc gccttgatcc tcgtgataac
      901 ggccggtcca ctcgccgacg acgctcagtt gcgcgtgcgc cggcgcaacg gccgcaacca
      961 cgagccacgc ggcgctgagg aaaaatcttc ccacgcgcga cctagttgaa cgtctcgccc
     1021 gggtttctgc cccactcgaa gccgtcggag ttgcgacgca gatattgcat cctgatgcgg
     1081 tgatcgctgg ggtcgcggcc cggattgccg gtgatcgaaa cgacgtcgcc gacgcgcagg
     1141 gtttggttcg tgacgccctg cccggcgagc tgacccgcgc cgccccactc gacggcccag
     1201 cgctggagct gcccgttctc gtccggcgct tcgacgtgga cgaacgaatg cgggttgcgg
     1261 aacatgaact gcagcagctt gccctcgatc tccatggtgc gatcctcgaa gtaggtcgcc
     1321 gtgaacgagt gatgggccgc cgcgacaccc gcgagcgcgg tcagcgcggc ggcgggcaga
     1381 atcaatgacc aacgaattcg catgatcgag ctcccaagag ttcaggccgc cggaccgcgc
     1441 aggcgctccg gctgtcccga ttctaccggt ctcggcgctc tcatgttaag ccgcagacgc
     1501 gcgctgccgc cgcaggcg
//
LOCUS       DATCUD010000667         6798 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_6785, whole genome shotgun sequence.
ACCESSION   DATCUD010000667 DATCUD010000000
VERSION     DATCUD010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 6798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6798
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6785"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      <1..149
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            250..2115
                     /locus_tag="VIQ99_09700"
     CDS             250..2115
                     /locus_tag="VIQ99_09700"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183462.1"
                     /translation="MSFVHRSIVTTAAFAVLAALPRVGAAQNAPPQRLEEIVVTSSMV
                     AQTRRQIGTAVSVVDIEEIELRGYASLAEVLRTQTGIGVTNAGGPGKSTAVRIRGEDS
                     FRTVLIVDGIRALDPSAPQVAPTFDSLLTTSDFQRVEVLRGPQGFLYGADAGGVVNVI
                     TQRGADDLGGRLGLEYGDHSTRKIDGAVSGGGAGGDYFLSVVDYETDGFNSRTADTVL
                     QDDDGAENTTLHAKLGWNWSENLRLQLVARNIDAENSYDSCFVIHDCFGTTEQAAYKV
                     SAEHAAGNATNVLGYSTIDTVRDDYAGGAPSYGTEGEIARFEYTGSYKGSEVSTLVYG
                     LDFQDEELASDEGPRSRDNKGYYVEYQGAFENALFVSLGARYDDNDDFGTHTSSRLSL
                     AYVQQAGSGNSVKYRASVGTGFRAPSLYEIAYNNGPFAFPPAAGSTLTEESSQGYDVG
                     IEYDTANGAHFEVTYFEQEIEDEVYFDLVSFSGYLQSNGISTSKGFEVAASLPLGPRW
                     SLLANWLDNEATDTANQQRLQRPENLGNFGLMFRGADERLGFIANYRVVRDSIDVGSV
                     AIDDYEVLDLSMTFDATESFQFFARIENATDEEYQELVGYNTAERSIYGGVRFRF"
     gene            2208..3371
                     /locus_tag="VIQ99_09705"
     CDS             2208..3371
                     /locus_tag="VIQ99_09705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183463.1"
                     /translation="MRRVTKLVSCAALAAMSGCSPPRQISDSGFGAYEVSLAAWHDGL
                     AAAWYDTRHGNAELYVQHLDADGGAAGPEIRLTETSGESYEADIAAITDAFAIAWYEK
                     ERDGALGARLGVWARDGTPRWSAPIAIGGGHSRNPAVRSFGDALFCAWIESDVDGREF
                     VWGGWWELDGRPRGVPRRLGAAGSTTWSLNAAITPSGEAWVVFDVQAGTEVEELFLAT
                     LGGGRTALRQLTVDDGIPSKYPDLGIAGERAAIAWFDERDGNPEVYLAAGLATEFQWE
                     IEGRARRVTQTPGSSIGAYLAWNDDRIGLTWSDDSDGNYEVYFQTFDGEGRPLTHGER
                     LAETPAHSMIPAIKPWRDGFALAWDEVVAATETARSAGAYHESSQAEVLFAFR"
     gene            complement(3392..3769)
                     /locus_tag="VIQ99_09710"
     CDS             complement(3392..3769)
                     /locus_tag="VIQ99_09710"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183464.1"
                     /translation="MKFAVATLGLLLAAGAAFAHHSPIVFDRTRQVTLDGTVTEFRWG
                     NPHSWIHIDVADADGKVANWSIEMDPASHLARQGWRSSLLKPGDKISVVVYPLRNDEK
                     GGQYRSITLPDGKTLGQPADGVL"
     gene            complement(3781..4575)
                     /locus_tag="VIQ99_09715"
     CDS             complement(3781..4575)
                     /locus_tag="VIQ99_09715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183465.1"
                     /translation="MTGSKRAALAVAAALTIVASLHAGAQESELPPGALSPANLAKER
                     PAAPFDLTGTWQHELRGPQSWKFVPQSFELTPEAQLHYDAGRRAAAENKVYRDDIGQC
                     WPAGMPLIMTRVHPFLLMQYPTAIFMVQNFMNSLRIIYTDGRQHSDPDVVVPSWNGES
                     IGRWEGDTLVVDTKYFPGHHHWLDQGGASIPASDQLHIVERIRMVENGETLEIEYTMT
                     DPKTFKGEWKTTKRFNRLHDVDIYEVECTPDLNENLPATSSQSLIR"
     gene            complement(4772..5848)
                     /locus_tag="VIQ99_09720"
     CDS             complement(4772..5848)
                     /locus_tag="VIQ99_09720"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183466.1"
                     /translation="MVETRFREQYEDTLAVYLNEQTIAGLDIVTDGDCRFTQDIGGQS
                     WTSYPPFHMSGFDRIPKMAPIGGGGIGFPRGHILHDYIEARLMPSIVGPIGRGNMQYA
                     QIWKAAQRMTDKPVKFGTVTPELVAFAVQDFHYKDVRERIWAISNAFNEELHALADAG
                     CPVIQMEEPQIHLLAARGVVDKVINPEFMLEVFNNTVKGLRAKTEVWCHTCWGNPSQQ
                     RMFAQVQTYKPALKLLNKVDADVITFESCSSGGMDLEAIGKEITDMKVAIGVIDHHTL
                     QVETPKEVADHIRLALKHIPAERLVLSSDCGMGREGMARRHALYKMVSLVQGTNIVRK
                     ELGIKEAECIAADPNLTLLDVKRS"
     gene            6129..>6798
                     /locus_tag="VIQ99_09725"
     CDS             6129..>6798
                     /locus_tag="VIQ99_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020145551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183467.1"
                     /translation="MDLGNGLGHLTYSTLVHPGDTWIEMWDSLNRYVPQVKARVSPKK
                     SFGVSLRLSASSAKTLTGDRGERERLKEFLHQHDMYLYTVNAFPYGPFKNRVVKKDVY
                     EPDWSTDLRSTYTMEVADILAEVAAPHMNPSIQSPPLGFKGKVTGPEYVNEFTRHVIK
                     TVAHMVHLEKRTGRTVTLALEPEPACFLETTEEAVDYFKNHLYAAEAVRMLVTQTGLS
                     KPQAE"
BASE COUNT         1185 a         2091 c         2267 g         1255 t
ORIGIN      
        1 aggcgagcct cgaagccgga gctgcccccg caactgttag ccgcgaggat tcgttccagt
       61 catgccactg aggctatgtg cctcgggaag gcggagcgga tgcaatcgag cggtcagcca
      121 ggagacctgc cgagcacgta gcgtctgtca gccggggtgt gctgtgcagg agcgtcgtga
      181 cacggctgcc tgccagttct gtcccgcgct tgcctccata cccgttttcg cctcgggagg
      241 taagcgaaaa tgagcttcgt acatcgttcc atcgtcacca cggcggcgtt tgccgtgctc
      301 gccgcgttgc cgcgagtcgg cgccgcgcag aacgcgccgc cgcaacgcct cgaggaaatc
      361 gtcgtcacat cgagcatggt cgcgcagacg cgccgccaaa tcggcacggc cgtgtcggtc
      421 gtcgacatcg aggagatcga gctgcgcggc tacgcgagcc tggcggaagt gttgcggact
      481 cagaccggca tcggagtcac gaacgcgggt gggcccggca agtccacggc ggttcggatc
      541 cgcggtgagg actccttccg cacggtactg atcgtcgatg ggataagggc gctcgatccg
      601 agcgcgccac aggtcgcgcc cacgttcgac agcctgctga cgacgagcga ttttcagcgc
      661 gtcgaggtcc ttcggggccc acaaggcttc ctgtacggcg cggatgcggg cggcgtcgtg
      721 aacgtgatca cgcagcgagg cgccgacgat ctcggcggcc ggctcgggct cgagtacggc
      781 gaccactcga cgcggaaaat cgacggcgcc gtgtcgggcg gcggcgcagg cggcgactat
      841 ttcctctcgg tcgtcgatta cgagacggac ggcttcaact cgcgcaccgc cgacacggtg
      901 cttcaggacg acgacggcgc cgaaaacacg accctgcacg caaagctcgg gtggaactgg
      961 tccgagaacc tgcgccttca gctcgtcgcc cgcaatatcg atgccgagaa ctcctacgac
     1021 agttgcttcg tgattcacga ctgtttcggc acgacggagc aggcggcgta caaggtgtct
     1081 gccgagcacg cggccggcaa cgcgacgaac gttctcggct atagcaccat cgataccgtg
     1141 cgcgatgact acgccggcgg cgcgccgagc tacggaaccg aaggcgagat cgcgcgtttc
     1201 gagtacaccg gtagctacaa gggctcggag gtgtcgacgc tcgtctacgg tctcgatttc
     1261 caggacgagg agctcgccag cgacgaagga cctcggagcc gcgacaacaa gggctactac
     1321 gtcgagtatc aaggcgcctt cgagaacgcg ctgttcgttt cgctcggcgc gcgctatgac
     1381 gacaacgacg atttcggcac tcacacgagc tcgcgtctga gcctcgcgta cgtgcagcag
     1441 gccgggtccg gcaactcggt aaagtaccgt gcgagcgtcg gaaccggctt ccgcgcgccg
     1501 agcctctacg agatcgcgta caacaacggc ccgttcgcgt tcccgccagc ggccggctcg
     1561 acgctcactg aggagagcag ccagggatat gacgtcggca tcgagtacga cacggccaac
     1621 ggcgcgcatt tcgaagtcac gtatttcgag caggaaatcg aggacgaggt ctacttcgac
     1681 ctcgtgagtt tctccggcta cctgcagtcc aacggaatca gcacgtcgaa gggcttcgag
     1741 gtcgccgcca gcctcccgct tggtccgcgt tggagcctgc tcgcaaactg gctcgacaac
     1801 gaagcgacgg acaccgcgaa ccagcagcgg ctgcagcgtc ctgaaaacct cggcaacttc
     1861 gggttgatgt tccgtggtgc ggacgagcgt ctcgggttca ttgccaacta ccgcgtcgtg
     1921 cgggattcga tcgacgtcgg cagcgtcgcc attgacgatt acgaggtgct cgatttgtcg
     1981 atgaccttcg acgcgacgga gtcgttccaa ttttttgcgc ggatcgagaa cgcgacggac
     2041 gaggagtatc aggagctcgt gggatacaac acggcggagc gatcgatcta tggcggtgtt
     2101 cgcttccgtt tctgaagggg ttcacgaagc ttcagttgcc ggcatgaccg acttgcgcgt
     2161 aatttgccga gcttcgattg caggttgtgg tttgtggaac gtgtgacatg cggcgcgtaa
     2221 caaagctcgt ctcgtgcgct gcgctcgccg cgatgtccgg ctgctcgccg ccgcggcaaa
     2281 tcagcgacag cgggttcggc gcctatgagg tcagcctcgc tgcttggcac gacgggctcg
     2341 ccgcggcgtg gtacgacacg cgccacggca acgccgagct ctacgttcaa cacctcgacg
     2401 ccgacggcgg cgccgcgggg ccggagatca ggctcacgga gacgagcggc gagtcctacg
     2461 aggccgacat cgcggcgatc acggatgcat tcgcgatcgc gtggtacgaa aaagaacggg
     2521 acggcgcgct aggtgcgcgc ctcggagtct gggcgcgcga cgggacgccg aggtggtccg
     2581 cgccgattgc gatagggggc ggccacagcc gtaatcccgc cgtgcggagc ttcggcgacg
     2641 cgttgttctg cgcctggatc gagtccgacg tggacggccg cgaattcgtt tggggcggat
     2701 ggtgggagct cgacggacgg ccgcgtggag tgccgaggcg tctcggtgcg gccggctcca
     2761 cgacttggag cttgaatgcc gcgattaccc cttcgggcga ggcttgggtc gtgttcgatg
     2821 tgcaagccgg caccgaggtc gaggagctgt tcctcgccac gctcggcggt ggacgcaccg
     2881 cgctgaggca gctgaccgtg gacgatggca tcccatcgaa gtacccggat ctcgggatcg
     2941 caggcgagag ggcggcgatc gcttggttcg atgagcggga cgggaacccc gaggtttact
     3001 tggcggcggg gctcgcgacg gagtttcagt gggaaatcga aggccgtgcg cgacgcgtga
     3061 cgcagacgcc gggctcgtcg atcggtgcgt atctcgcgtg gaacgacgat cgcatcgggc
     3121 tcacgtggtc cgatgacagc gatggtaact acgaggtgta ctttcagacc ttcgacggcg
     3181 aaggccgacc gctgacccac ggggagcggc tggccgagac gccggcgcac tcgatgattc
     3241 cggcgatcaa gccttggcgt gacgggttcg cgctggcgtg ggatgaagtc gtcgccgcga
     3301 cggagacagc ccgcagcgcc ggcgcctatc acgagagctc gcaggccgag gtcttgtttg
     3361 cgttccgttg acggccgcgc tcaggccacg tctataacac gccgtcggcg ggttgcccga
     3421 gcgttttgcc gtccggcagc gtgatcgagc ggtactggcc gcctttctcg tcgttgcgga
     3481 gtggatagac gacgacgctg atcttgtcgc cgggcttcag cagcgacgaa cgccaacctt
     3541 ggcgggcgag gtgactcgcg ggatccatct cgatgctcca gttcgcgact ttgccgtcgg
     3601 cgtcggcgac gtcgatgtgg atccacgagt gcggattgcc ccagcggaac tccgtgactg
     3661 tgccgtccag cgtgacctgc cgcgtgcggt cgaacacgat cggtgagtga tgcgcgaagg
     3721 ccgcgcccgc ggcgagcagg aggcccaagg ttgcgactgc gaatttcatg atcgtctccg
     3781 tcagcgaatc agcgattgcg aggaggtcgc gggaaggttc tcgttcagat ccggcgtgca
     3841 ctcgacctcg tagatgtcga cgtcgtgcag ccgattgaag cgcttcgtcg tcttccattc
     3901 gcccttgaac gtcttcgggt ctgtcatcgt gtattcgatc tcgagcgtct cgccgttctc
     3961 gaccatgcgt atgcgctcca cgatgtggag ctggtcgctg gccggaatgc tcgcgccgcc
     4021 ttggtcgagc cagtggtgat ggcccggaaa atatttagtg tcgacgacga gcgtgtcgcc
     4081 ttcccagcgg ccgatcgact cgccgttcca gctcggcacg acgacgtcgg ggtcgctgtg
     4141 ctgccgaccg tccgtgtaga tgatccgcaa gctgttcatg aagttctgga ccatgaagat
     4201 cgcggtcggg tattgcatca gcaagaacgg gtggacgcgc gtcatgatca gcggcatccc
     4261 cgcgggccaa cactgaccga tatcgtcgcg gtagacctta ttctcggcag ccgcgcgtcg
     4321 ccctgcgtcg taatggagtt gcgcttcggg tgtgagctcg aacgactgcg gaacgaactt
     4381 ccacgactgc ggaccgcgca gctcgtgctg ccacgtgccg gtgaggtcga acggcgccgc
     4441 cggccgctcc ttggcgaggt tcgccggcga cagcgcgccg ggcggcagct ctgactcctg
     4501 ggcaccggcg tgtagtgagg cgacgatcgt gagcgccgcg gcaacggcca acgccgcgcg
     4561 tttcgagccc gtcatggctc cccctgtgct gactggtcga ttgactttag caccgttcaa
     4621 gggtgcacgg cctgccgggc agatctgatc ttgtcggaag ccgtgcttcc gctacggcgc
     4681 gtcgcatgag ctcgcgatca cggcgctcct gttcgccatg gcgacctccg gcctctcgcc
     4741 gtggcgagca cgaggtcgat tgcagggcgc gttagctgcg tttgacgtcg agcagcgtga
     4801 ggttcggatc cgcggcgatg cactcggctt ctttgatgcc gagctccttg cgcacgatgt
     4861 tcgtgccttg cacgagcgac accatcttgt acagcgcgtg ccggcgcgcc atgccctcgc
     4921 gccccatgcc gcagtcggat gacagcacga ggcgctcggc cgggatgtgc ttcagcgcga
     4981 gacggatgtg gtccgcgact tccttcggag tctcgacctg caacgtatgg tggtcgatca
     5041 cgccgatcgc gaccttcatg tccgtgatct ctttgccgat cgcttcgagg tccatgccgc
     5101 ccgagctgca cgattcgaac gtgatcacgt cggcatcgac cttgttcagc agcttcagcg
     5161 ccggcttgta ggtctgcacc tgagcgaaca tgcgctgctg cgacggatta ccccagcacg
     5221 tgtggcacca gacctcggtc tttgctcgca aacccttcac ggtgttgttg aacacctcga
     5281 gcatgaactc gggattgatg accttgtcga cgacgccgcg cgccgcgagc aagtggatct
     5341 gcggctcttc catctggatc acggggcagc cggcgtcggc gagcgcgtgg agctcctcgt
     5401 tgaacgcgtt gctgatggcc caaatgcgct cgcgtacgtc cttgtagtgg aagtcctgca
     5461 cggcgaacgc gacgagctcc ggcgtgacgg taccgaactt cacgggcttg tccgtcatgc
     5521 gctgcgcggc tttccagatc tgcgcgtatt gcatgttgcc gcggccgatc gggccgacga
     5581 tgctcggcat cagccgcgct tcgatgtagt cgtgcagaat gtggccgcgc gggaaaccga
     5641 tgccgccgcc gccgatcggc gccatcttcg ggattcggtc gaagcccgac atgtggaacg
     5701 gcggatagct ggtccagctc tggccaccga tgtcttgcgt gaaacggcag tcgccgtcgg
     5761 tcacgatgtc gaggccggca atggtctgct cgttcagata gacggcgagc gtgtcctcgt
     5821 attgctcacg gaatcgcgtc tcgaccatgg cttcgagaaa tgccttcagc cctaagtttt
     5881 ccgtatacca gctcgggcgc ggcagagagc ccgtaatggt cgtaggcagg agttggtttg
     5941 ccgtcgcacg tagcatcgaa agtaccccgt aggtgtgtga gagcggcctc gagagccgac
     6001 ttatttatga aagccggata caatattgga gaaaccgttt ccccacaacc ctgaacgaat
     6061 cgggccacgc gacgatgagc tcgagggcgc ggcagcggga acgttaggac ctaactgagg
     6121 agcactacat ggatttgggc aatggcctgg gtcacctgac ctattcgacc ctcgtgcatc
     6181 cgggcgacac gtggatcgag atgtgggaca gcttgaaccg ctacgttccg caagtgaaag
     6241 cgcgcgtgtc gccgaagaag tcttttggtg tgtcgctgcg tctgtcggct tcgtcggcga
     6301 agaccctgac cggcgatcgc ggcgagcgcg agcgactcaa ggagtttctg caccagcacg
     6361 acatgtacct ctatacggtg aacgcgtttc cgtacgggcc gttcaagaat cgcgtcgtga
     6421 agaaggacgt ctacgagccc gactggagca cggacctgcg ttccacgtac acgatggagg
     6481 tcgccgacat cctggcggag gtcgcggcgc cgcacatgaa tccgtcgatc cagagcccgc
     6541 cgctcggctt caagggcaag gtcacgggcc cggaatacgt caacgagttc acgcgccacg
     6601 tgatcaagac cgtcgcgcac atggtgcacc tcgagaagcg cacgggccgc accgtcacgc
     6661 tcgcgctcga gcccgagccc gcgtgcttcc tcgagaccac ggaagaggcc gtcgactact
     6721 tcaagaatca cctgtacgca gccgaggccg tgcgtatgct cgtgacgcag accggcttgt
     6781 cgaaaccgca ggccgaga
//
LOCUS       DATCUD010000668         1598 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62861, whole genome shotgun sequence.
ACCESSION   DATCUD010000668 DATCUD010000000
VERSION     DATCUD010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62861"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            116..808
                     /locus_tag="VIQ99_09730"
     CDS             116..808
                     /locus_tag="VIQ99_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017917079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY9183468.1"
                     /translation="MRLLLVEDDPNLSRSLAAQLEQAGYSVERSMDGREGLYYAREYP
                     VDLAIVDLGLPSMSGVELIKQLRADGKAYPILVLTARDRWQDKVEALKLGADDYVVKP
                     FNVEELLARVDALLRRAGGWAQSELVCGPITLDTRTQEVKVNGTKLDLTSFEYKLLEY
                     LMLHAGEVLSKTKITEELYNEDFERDSNVIEVFIGRLRRKLDPDNSLKPIETLRGRGY
                     RLAVARGAPDTA"
     gene            823..>1598
                     /locus_tag="VIQ99_09735"
     CDS             823..>1598
                     /locus_tag="VIQ99_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEY9183469.1"
                     /translation="MALVRSLRARVVLWVSVALVVLFAVTIAGLDIAFRESTDSARRE
                     LLEVQVLGLVALAESDASGELTLPADALDAQLELANSGLYGALFAADGRALWQSLSLL
                     GRDFPVDDLPPPGEEQLLTLDVPGFPPLEALLMTLTWADGPEADYTFAIALSLEPYNA
                     RQAAFRRNLIGWFGGVTLTMMVVIGALLTFLLLPLRRLERQVREVEAGERVKLTGRYP
                     LELVGLADNLNTLIDTERRRLARYRNTLDDLAHSLKTPLAA"
BASE COUNT          257 a          514 c          544 g          283 t
ORIGIN      
        1 atccaagtcg gtgatcggat ggttcacgag atccggatcc tgggcgagga cgggcgcacg
       61 gtccgcacgt tccggatcga cgcccagacc ggctccttct tataggaacc tcgacatgcg
      121 cctgctgttg gtcgaggacg atccgaacct gagccgctcg ctggcggccc agctggaaca
      181 agccgggtac tcggtcgagc ggagcatgga tggccgcgaa gggctgtact acgcgcgcga
      241 gtaccccgtc gacctcgcga tcgtcgacct cggcctgccg agcatgtcgg gcgtcgagct
      301 gatcaagcag ctgcgcgccg acggcaaggc gtatccgatc ctcgtgctca cggcgcgcga
      361 ccgctggcag gacaaggtgg aggcattgaa gctcggcgcc gacgactacg tcgtgaagcc
      421 gttcaacgtc gaggagctgc tggcacgcgt cgatgcgctg ctccggcgcg cgggaggatg
      481 ggcgcagtcc gagctcgtgt gcgggccgat cacgctcgac acgcgcaccc aggaggtcaa
      541 ggtcaacggc acgaagctcg atctcacgag cttcgagtac aagctgctcg aatacctgat
      601 gctgcacgcc ggcgaggtgc tctcgaagac gaagatcacg gaagagctct acaacgagga
      661 cttcgagcgc gacagcaacg tgatcgaggt gttcattggc cggctgcggc gcaagctcga
      721 tcccgacaac tcgttgaagc ccatcgagac gttgcgcgga cgcggttatc gcttggccgt
      781 ggctcgcggc gcaccggata ccgcctgacc gtgaattgac gcatggcgct cgttcgttcc
      841 cttcgtgcgc gcgtcgtgct ctgggtcagc gtcgcgctgg tcgtgttgtt cgccgtcacg
      901 atcgccggtc tcgacatcgc attccgcgaa agcaccgatt ccgctcgtcg cgagctcttg
      961 gaggtgcagg tgctcgggct cgtagcgctc gcggagagcg acgcgagcgg cgagctcacg
     1021 ctgccggccg acgcgttgga cgcgcagctc gagctcgcga actcgggcct atatggtgcg
     1081 ttgttcgcgg ccgacggccg tgccttgtgg caatcgctgt cgctgctagg gcgcgacttc
     1141 cccgtcgacg accttccgcc tcccggcgag gagcagctcc tgacgctcga cgtgccgggt
     1201 ttcccgccgc tcgaggcgtt attgatgacg ttgacctggg cggacggtcc ggaggccgat
     1261 tacacgttcg cgatcgcgct ctcgctcgag ccgtacaacg cgcgccaagc cgcgtttcgc
     1321 cgcaacctga ttgggtggtt cggcggcgtc acgctcacga tgatggtcgt gatcggcgcg
     1381 ctgctcacat tccttttgct gccgttgcgc cggctcgagc ggcaggtgcg agaggtcgag
     1441 gcgggggagc gcgtcaagct cacggggcgt tatccgttgg agctcgtagg gctcgccgat
     1501 aacctgaaca cgctgatcga cacggagcgc cgccggctcg cgcgctaccg caacacgctc
     1561 gacgatctcg cgcacagctt gaagacgccg ctcgcggc
//
LOCUS       DATCUD010000669         1817 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_27681, whole genome shotgun sequence.
ACCESSION   DATCUD010000669 DATCUD010000000
VERSION     DATCUD010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27681"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..430
                     /gene="coaD"
                     /locus_tag="VIQ99_09740"
     CDS             <1..430
                     /gene="coaD"
                     /locus_tag="VIQ99_09740"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017675875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEY9183470.1"
                     /translation="DLIRRCVRLFDRVVVAIAASPKKAPLFSLDERVELAKEVLRDLP
                     EVSVTGYTGLTVDFARANGFKAIIRGLRAVSDFEYEFQLATMNRHLTDGVETVFLTPS
                     EHHTFISSSLVREIAEFGGDVGAFVHPFVAERLKKKFGKT"
     gene            544..>1817
                     /locus_tag="VIQ99_09745"
     CDS             544..>1817
                     /locus_tag="VIQ99_09745"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HEY9183471.1"
                     /translation="MTANPHASAAGREILRAGGSAVDAAIAVQLVLTLVEPQSSGIGG
                     GAFMLVYEAPGQGVSGTITAYEGRETAPAAATPDMFMNPNGRAESFANVGIGGLAVGV
                     PGALRMLELAHREHGRLPWARLFEPAIALAEQGFEVSPRLHSLLDGFKRFARGDDFRA
                     YFYDASGEPRPVGFKLVNEEYAAALRMLAAQGAEPMHTGELAAAIAAEVRDNNVRPGR
                     MTAQDLADYRAHTTAPLCTPYRVWRVCGPHLPSSGGVTTQQVLGMLATLDLPPIDAEP
                     VRAIHLFVEANRLAFADRNLYLADPEFVEAPIASLLDPSYLRARATLIDPNRAMGSVT
                     AGNTLPAAAWEFAPGTPSERPSTSHFSIVDRYGDAVAMTTSVQGAFGSQLMVGGFILN
                     NQLTDFDYVPEVNGKPVANRIEGGKRPLSSMSP"
BASE COUNT          284 a          616 c          603 g          314 t
ORIGIN      
        1 agacctgatc agacgttgcg ttcggctgtt cgaccgagtc gtcgtcgcga tcgcggcgag
       61 cccgaagaag gccccgctgt tttcgctcga cgagcgagtc gagctcgcaa aggaagtgct
      121 gagggacctg cccgaggtgt ccgtcaccgg gtacacgggc ctcaccgtcg acttcgcgcg
      181 cgccaacggc ttcaaggcga tcattcgcgg gttgcgggcc gtttccgatt tcgagtacga
      241 gtttcagctc gcgacgatga accgccatct cacggacggc gtggaaacgg tgttcctgac
      301 gccgtccgag caccacacgt tcatctcgtc gagcttggtt cgcgagatcg cggagttcgg
      361 tggcgacgtc ggcgcgttcg ttcatccgtt cgtcgcggag cgcctgaaga agaaattcgg
      421 gaaaacctag ccgtgtggcg gccgctcgca tcgtcgggac tcctcgtcgc gtcgctggcc
      481 gttgtcgcgt tcggcgctgc tgctcaaccc gcgggtccag tgcgggcgac gacacaactc
      541 gtcgtgacag cgaatccaca cgcgtccgcg gccggccgcg agatcctgcg cgccggcggc
      601 agcgccgtcg acgcggccat tgccgtgcag ctcgtgctga ctctagtcga gccgcagtcg
      661 tcgggcatcg ggggcggtgc tttcatgctc gtctacgaag cgcccggtca gggcgtgtcc
      721 ggcaccatca ccgcgtacga aggccgagag acggcaccgg ccgccgccac acccgacatg
      781 ttcatgaatc cgaatgggcg cgcggagtcg tttgcgaacg tgggcatcgg cggtctcgcc
      841 gtcggcgttc ccggcgcgtt acgcatgctc gagctcgcac atcgcgagca cggtcgcctg
      901 ccgtgggccc ggctgttcga gcccgcgatc gcgctcgccg agcaagggtt cgaagtgtcg
      961 ccgcgcctac actcgctgct cgacggcttc aagcgcttcg cgcgcggcga cgactttcgt
     1021 gcctatttct acgacgcgag cggcgagccg cgccccgtcg gattcaagct cgtgaatgaa
     1081 gaatacgcgg ccgcgctgcg gatgctcgcg gcgcagggcg ccgagcccat gcatacgggt
     1141 gagctcgcgg ccgccatcgc ggccgaagtc cgcgacaaca acgtgcgacc cgggcgaatg
     1201 acggcgcagg atctcgcaga ctatcgcgcg catacgaccg ccccgctgtg cacgccatat
     1261 cgtgtctggc gcgtatgcgg gccgcatctg ccgtcttcgg gcggcgtcac gacgcagcaa
     1321 gtgctcggta tgctcgcaac gctcgatctg ccgccaatcg acgccgagcc cgtgcgcgcg
     1381 attcacctat tcgtggaggc gaatcggctc gcgttcgcgg atcgcaatct gtacttggca
     1441 gaccccgagt tcgtggaagc tcccatcgct tcgctgctgg atccgagcta tctgcgcgcg
     1501 cgcgccacgc tgatcgaccc gaacagggcg atgggctcgg tcacggccgg caacacgctg
     1561 cccgccgcgg cctgggaatt tgcgcccggc acgccgtcgg agcggccgtc gacgagccac
     1621 ttctcgatcg tcgatcgtta cggcgacgcc gtcgcgatga cgacgagcgt gcagggcgcg
     1681 ttcggcagcc agctcatggt cggcggcttc atcttgaaca atcagctcac cgacttcgac
     1741 tacgtgcccg aggtcaacgg caagccggtc gcgaatcgca tcgagggcgg caagcgcccg
     1801 ctctcgagca tgtcgcc
//
LOCUS       DATCUD010000670         2183 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105607, whole genome shotgun sequence.
ACCESSION   DATCUD010000670 DATCUD010000000
VERSION     DATCUD010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105607"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..650
                     /gene="zapE"
                     /locus_tag="VIQ99_09750"
     CDS             <1..650
                     /gene="zapE"
                     /locus_tag="VIQ99_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011628085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEY9183472.1"
                     /translation="FTGLFARGVTLAATSNIVPDQLYSGGLQRQRFLPTIALLKKHTE
                     VVHVEGGTDYRLRALERADVYQIPAGAAADERLKQFFEEIAPDEGDHGGSLEILGRRI
                     DYRRAADGVIWFDFAQICDGPRSQDDYIELSRLYQTVLISNVPRFDTTLENQARRFIA
                     LVDEFYDRRVKLILSAETAVEDLYRGERLRHDILRTKSRLQEMQSHDYLAEAHRT"
     gene            complement(666..1532)
                     /locus_tag="VIQ99_09755"
     CDS             complement(666..1532)
                     /locus_tag="VIQ99_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015353574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004833 - tryptophan 2,3-dioxygenase
                     activity [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 2,3-dioxygenase family protein"
                     /protein_id="HEY9183473.1"
                     /translation="MTTKPGPDKSAPVTPVTESSEHAAAGQVRYESYLQLDKLLSAQQ
                     PISTTREHDEILFIIQHQVAELWFKLIIHELDAAIEFLKHDELPRCIKVLNRVKQVQH
                     QLINQWSVLATLTPTEYAAFRETLGTASGFQSPQYRLLEFKLGRKDRAVLGRFGHHLE
                     YYRQLKSALEHPSLYDEFLRYLYRVGHRVPDARVERDWTHTYEHHPGVVEVLQTIYQH
                     PDQYWAAYEVSERLVDIEINFQSWRFHHMKTVERIIGAKAGTGGTSGVKFLQRAVDTT
                     FFPELIEVRSKI"
     gene            1696..>2183
                     /locus_tag="VIQ99_09760"
     CDS             1696..>2183
                     /locus_tag="VIQ99_09760"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012502724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEY9183474.1"
                     /translation="MGQLVLVRHGQSDWNAKNLFTGWTDVDLTAQGEREAREAGRTLA
                     DAAIAFDIAFTSVLTRAIRTLWLVLDEMKLMWIPVENSWRLNERHYGSLQGLDKAQTT
                     AKHGEAQVKIWRRSYDIPPPPLTPDDPQHPSHDRRYADLQPNELPLTESLKDTVARFL
                     PY"
BASE COUNT          405 a          688 c          695 g          395 t
ORIGIN      
        1 tgtttaccgg gctgttcgcg cgtggcgtga ctctcgcggc gacgtcgaac atcgttcccg
       61 atcagctcta cagcggtggc ttgcaacgcc agcggttcct gccgacgatc gctttgctga
      121 agaagcacac cgaggtcgtg catgtcgaag gcggcaccga ctaccggctg cgcgcgctcg
      181 agcgcgcgga tgtttatcaa atcccggccg gcgcagccgc cgatgagcgc ctcaagcagt
      241 tcttcgagga gatcgcgccc gacgaaggcg atcacggcgg ctcgctcgag atcttgggcc
      301 ggcggatcga ctatcgccgc gccgccgacg gcgtgatctg gttcgacttc gcgcagatct
      361 gcgacggccc gcgcagccag gacgactaca tcgaattgtc gcggctgtat caaaccgtgc
      421 tgatctcgaa cgtgccgcgc ttcgacacga ccctcgagaa ccaggcgcgg cgtttcatcg
      481 cgctcgtcga tgaattctac gaccggcgcg tgaagctgat cctttcggcc gaaacggcgg
      541 tcgaggatct ttatcgcggc gagcgcctac gccacgacat cttgcgaacg aagagccgcc
      601 tgcaagaaat gcagagccac gattacttgg ccgaggctca tcgcacctga gtggcgcgcg
      661 aacgctcaga tcttgctgcg gacctcgatc agctcgggga agaacgtcgt atcgacggcg
      721 cgctgcaaga atttcacgcc cgacgtgccg cccgtgccgg ccttggcgcc gatgatgcgc
      781 tccacggtct tcatgtgatg gaagcgccac gactggaaat tgatctcgat gtcgacgagc
      841 cgttccgaca cctcgtaggc cgcccagtat tgatcggggt gctggtagat cgtctgcagc
      901 acctcgacga cgccgggatg atgctcatag gtgtgcgtcc agtcgcgctc gacacgcgcg
      961 tcgggcacgc gatggccgac gcgatacaga tagcgtaaga actcgtcgta aaggctggga
     1021 tgctcgagcg cggacttgag ctgccggtag tactcgagat ggtggccgaa acgcccgagc
     1081 acggctcgat cctttcggcc cagcttgaac tcgagcagac ggtactgcgg cgattggaag
     1141 cccgaggccg tgccgagcgt ttcgcggaac gcggcatact cggtcggcgt cagagtggcg
     1201 agcacggacc actgattgat cagctggtgc tgcacctgct tcacgcggtt caacaccttg
     1261 atgcagcgcg gcagctcatc gtgcttcagg aattcgatcg cggcgtcgag ctcgtggatg
     1321 atcagcttga accagagctc ggcgacttgg tgctgaatga tgaacaggat ctcgtcgtgc
     1381 tcgcgcgtcg tgctgatcgg ctgctgcgcg gacagcaact tgtcgagctg caaatacgat
     1441 tcgtagcgga cttggcctgc cgcagcgtgc tcggagcttt ccgtgacagg ggtgactgga
     1501 gcgctcttgt cgggaccggg ctttgttgtc atcgtgcgat cctcggcctg gcggtcggtg
     1561 ccctcgttcg agccactata actcacttct gcgcgcacgc cgcaaggctg cgccgaaaca
     1621 gccacccgcg cggttccgca tgcggcgccg atctgggaca atacaaaaat gaacaaaagc
     1681 acgtcgcgag tgccgatcgg gcaactcgtt ctcgttcggc acggccagag cgactggaac
     1741 gcgaagaatc tgttcacggg ctggaccgac gtcgatctca ccgcgcaggg cgagcgcgaa
     1801 gcgcgcgagg ccggccgcac gttggcagac gcggccatcg cgttcgacat cgcgttcacg
     1861 tcggtgctga cgcgcgcgat ccgcacgctg tggctcgtgc tcgacgagat gaagctgatg
     1921 tggatccccg tcgagaactc gtggcggctg aacgagcgtc actacggctc cttgcaaggg
     1981 ctcgacaagg cgcagacgac ggcgaaacac ggcgaggcgc aggtcaagat ctggcgccgc
     2041 agctacgaca tcccgccgcc cccgctcacg cccgacgatc ctcagcaccc gtcacacgat
     2101 cgccgctatg ccgacctgca accgaacgag ctgccgctaa ccgagtcgct caaggacact
     2161 gtcgccaggt ttcttccgta ctg
//
LOCUS       DATCUD010000671         1725 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77688, whole genome shotgun sequence.
ACCESSION   DATCUD010000671 DATCUD010000000
VERSION     DATCUD010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77688"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..663
                     /locus_tag="VIQ99_09765"
     CDS             <1..663
                     /locus_tag="VIQ99_09765"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9183475.1"
                     /translation="ADDVDPGRAIELSTGVLAGPAARTIAAAARDYAADLVVAGARGE
                     RDAEGGRVLGGTADKLLSMADAPLLLVRRAREEPATSVVAAVDLSPRSLSVLEWADCA
                     AAARQLHAYHAFDVPFTARLRAYGLDDSAIDVYREQARSQRDASLASLVTSIARTGAT
                     SRVVERGDPAVLLQRYIEAVRPSLVVLGKHVKDARSTPASSVGSVCRFIAGNVSADVL
                     IV"
     gene            complement(653..1549)
                     /locus_tag="VIQ99_09770"
     CDS             complement(653..1549)
                     /locus_tag="VIQ99_09770"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010464562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEY9183476.1"
                     /translation="MSSTGEGQGARLLIGLIGSGIGRSLTPAMHEEEARQHGLMLYDQ
                     LIDLERAQLGPEALPALLSALRTIGFAGFNVTHPCKQAILPLLDELSDSARTIGAVNT
                     VVFRDGRSIGHNTDSSGWEWAFRRALPQAGLSRVVLLGAGGAGAAIAHALLRLGALKL
                     LIFDAEPARAAALASRLERAHGNGRVEHATDLSRALARAQGLVHATPTGMAHSPGMPL
                     SAELLTPNLWVSEIVYFPLETELLKAARAAGCAAIDGGGMAVGQALGAFRLFTGRDAD
                     ATRVERHFRQLVHGFSPTPVTR"
     gene            complement(1546..>1725)
                     /locus_tag="VIQ99_09775"
     CDS             complement(1546..>1725)
                     /locus_tag="VIQ99_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008331689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9183477.1"
                     /translation="ITFGITLIAALAALSARETFRVPLQKLGDSAAQPVDERDYVRVR
                     EQAIAEARALKTGVP"
BASE COUNT          272 a          595 c          584 g          274 t
ORIGIN      
        1 gccgacgacg tggaccccgg gcgcgcgatc gagctctcga ccggcgtgct tgcgggaccc
       61 gccgcgcgaa cgatcgccgc cgcggcacgc gactacgcgg cggatctggt cgtcgccggt
      121 gcccgcggcg agcgtgatgc cgagggtgga cgcgtgctcg gtggaactgc cgacaagctg
      181 ctgtccatgg ccgacgctcc gctgttgctg gtacgccgag ctcgcgagga gcccgccacg
      241 agcgtcgtcg ccgcggtgga cctttcgccg cggtcactgt ccgtgctcga gtgggccgac
      301 tgcgcggctg cggcaagaca gctccacgcg tatcacgcgt tcgacgtgcc attcacggcg
      361 cgtctccggg cgtatggtct cgacgatagc gccatcgacg tgtaccggga gcaagcacgg
      421 tcgcagcgcg acgctagtct cgcttccctc gtgacttcca tcgcccgaac cggcgccacg
      481 tcgcgggtgg tcgagcgcgg cgatccggcc gttctgctcc agcgctacat cgaggccgtg
      541 cgaccatcgc tcgtcgttct cggcaaacac gtgaaggacg cacgctcgac gcccgcgagc
      601 agcgtgggca gcgtttgcag gttcatcgcg ggtaacgtgt ccgccgacgt gctcatcgtg
      661 taacgggcgt cggagaaaat ccgtgcacga gttgcctgaa gtgtcgctcg acgcgtgtgg
      721 cgtccgcgtc gcggcccgtg aatagacgaa acgctcccag cgcttgaccg accgccatgc
      781 cgccgccgtc gatcgcggcg cagccggccg ctcgcgcggc tttcagcagc tccgtctcca
      841 acgggaagta aacgatctcc gagacccata gattgggcgt gagcaactcc gccgacaacg
      901 gcatccccgg tgaatgcgcc attccggtcg gcgtcgcgtg cacgagtcct tgcgcacgcg
      961 cgagggctcg agacagatcc gttgcgtgct cgacacggcc gttgccgtga gcccgctcga
     1021 ggcggcttgc cagtgcagcg gcgcgtgccg gctcggcatc gaagatcagc aacttcagcg
     1081 caccgagacg cagcagggcg tgcgcgatcg ccgcgccggc gccgccggcg ccgagcagca
     1141 cgacccgcga caggccggcc tgcggcaatg cgcggcgaaa cgcccactcc cacccggagc
     1201 tatcggtgtt gtggccgatc gaccggccgt cgcgaaagac gacggtgttg acggcgccga
     1261 tcgtccgcgc cgagtccgac agttcgtcga gcaacggcag gatcgcttgc ttgcaagggt
     1321 gagtaacatt gaagcccgcg aagccgatcg tgcgcagcgc actcagcaag gccggcaacg
     1381 cctcggggcc gagttgcgcg cgctcgaggt cgatgagctg atcgtagagc atgagcccgt
     1441 gctgtcgagc ttcctcctcg tgcatcgccg gcgtcaacga acgcccgatg ccggagccga
     1501 tcaggcctat cagcaacctg gcgccttgcc cttcgcccgt cgagctcatg gcacgcccgt
     1561 cttcagcgcc cgcgcttcgg cgatcgcttg ctcgcgcact cgaacatagt cacgttcgtc
     1621 gaccggttgc gctgccgaat cgccgagctt ctgtagcggc acgcgaaacg tttcgcgagc
     1681 gctgagcgca gcgagagctg cgatgagcgt gatgccgaag gtgat
//
LOCUS       DATCUD010000672         1707 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99030, whole genome shotgun sequence.
ACCESSION   DATCUD010000672 DATCUD010000000
VERSION     DATCUD010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99030"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VIQ99_09780"
     CDS             <1..376
                     /locus_tag="VIQ99_09780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="glycine cleavage system protein R"
                     /protein_id="HEY9183478.1"
                     /translation="WHTVSRMERELTRFANANGVTMQFKRTEPRRFGKELLPYAVDVV
                     GLDQPGVVHSLSGFFAARKVEIAEVSTRSYAATHTGAPMFSVQMAINIPANVHISGLR
                     EEFMDFCDQLNVDAILEPVKHS"
     gene            390..863
                     /locus_tag="VIQ99_09785"
     CDS             390..863
                     /locus_tag="VIQ99_09785"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020397054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY9183479.1"
                     /translation="MPVTKPAIGKKIKAFSVPTTNAAELTTKDLAGKPYVLYFYPKDD
                     TPGCTLEGKDFRDHHAKFKRLGVRVLGVSRDSLASHTRFQGKYDLPFELIADTDEALC
                     RQFDVIKEKNMYGRKVMGIERSTFLVDADGVLRREWRKVKVDGHVAEVLAAASEL"
     gene            900..>1707
                     /locus_tag="VIQ99_09790"
     CDS             900..>1707
                     /locus_tag="VIQ99_09790"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY9183480.1"
                     /translation="MDVESRQHTKAARTWVAMLAAALAFPGHAAELPDFGTPADAVLN
                     KSREAQIGRGVMLQLRNAGVVVDDPFLSEYLSSLGSRLASHLNEDGEFKFNFFIVKDE
                     RINAFALPGGYIGVNSGLLLASETESEVAGVLAHEISHVTQRHIARAAYDSQRTSIMS
                     MAAMLAALVLGAASDMSSDAMQGVVTASQAMAAQRQINFTRAHEHEADRVGIQLLSGA
                     GFDPYAMASFFEKLGRRYGGSSQYVPELLLTHPVSADRVAEARERARQLPS"
BASE COUNT          340 a          513 c          544 g          310 t
ORIGIN      
        1 ctggcatacg gtcagccgaa tggagcgtga gctcacgcgc ttcgccaacg ccaacggcgt
       61 aacgatgcag ttcaagcgaa ccgagccgcg acgtttcggc aaggagctgc tgccgtacgc
      121 cgtcgacgtg gtcggcttgg atcagccggg cgtagtgcat agcctgagcg gcttcttcgc
      181 cgcgcgaaag gtcgagatcg ccgaagtctc gacccgcagc tacgcggcca cgcataccgg
      241 cgcgccgatg ttctccgttc aaatggcgat caacattccc gcgaacgtgc acatctcggg
      301 gctacgtgag gagttcatgg acttctgcga ccagctgaac gtggatgcga tcttggagcc
      361 ggtcaaacat tcttgaagga tttccgggta tacctgtgac caaacctgcc atcggcaaga
      421 agatcaaagc cttcagcgtc cccacgacga acgccgccga attgaccacg aaagatctcg
      481 ccggcaagcc ttatgtcctg tatttctatc ccaaggacga cacgccgggt tgcacgctgg
      541 aaggcaagga tttccgcgac caccatgcga aattcaagcg actcggagtg cgcgtgctcg
      601 gggtgtcgcg tgacagtctg gcgtcgcata cccgatttca gggaaagtat gacttgccgt
      661 tcgagctgat tgccgataca gacgaggcgc tttgccgtca gttcgacgtg atcaaggaaa
      721 agaacatgta cggccgcaag gtgatgggaa tcgagcgcag cacgttcctc gtggatgccg
      781 atggcgtctt gcgccgggag tggcgtaagg tcaaggtgga cggccacgtc gccgaagtac
      841 tggcggccgc gtcagagctg tagactgaac gcacacgccc ggctgaggtc gatagtcaca
      901 tggacgtcga atcgagacag catacgaaag ccgcacgaac gtgggtcgca atgctcgcag
      961 cggcgttggc gttccccggc catgcggccg agctcccgga tttcggtaca ccggccgacg
     1021 ccgtcctgaa caagagtcgc gaagcgcaaa tcggccgcgg cgtcatgctg cagcttcgca
     1081 atgccggcgt cgtcgtggac gatccgttct tgagcgagta cttgagctcg ttgggctcgc
     1141 gactcgcctc gcatctcaat gaggacggcg agttcaagtt caatttcttc atcgtcaagg
     1201 acgagcggat caacgcgttc gcgttgccgg gcggttacat cggcgtcaat tccggcctgc
     1261 tgctcgccag cgagacggag agcgaggtcg cgggcgtgtt ggcgcacgag atctcgcacg
     1321 tcacacagcg ccacatcgcc cgggcggcct acgacagcca gcgcacgagc atcatgtcga
     1381 tggcggctat gttggcggcc ttggtcttgg gcgcggccag cgacatgagc agcgatgcta
     1441 tgcaaggagt cgtcaccgcc tcgcaagcga tggcggcgca gcgccagatc aacttcacgc
     1501 gagcacacga gcacgaagcg gatcgcgtgg ggattcaact cctgtccggc gccggcttcg
     1561 atccctatgc gatggcgagc ttcttcgaga agctcggcag gcgttacggc ggctcgtccc
     1621 agtacgttcc cgaattgctg ctgacgcacc cggtcagcgc ggatcgagtc gcagaggcgc
     1681 gcgagcgagc tcgccagttg ccgtccg
//
LOCUS       DATCUD010000673         2887 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_62903, whole genome shotgun sequence.
ACCESSION   DATCUD010000673 DATCUD010000000
VERSION     DATCUD010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62903"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(146..532)
                     /locus_tag="VIQ99_09795"
     CDS             complement(146..532)
                     /locus_tag="VIQ99_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011479064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEY9183481.1"
                     /translation="MSELPIPPPTEITLHRRSRDLTVRFADGMHARLSAEFLRVHSPS
                     AEVKGHAAGEGILVTGKEGVNIAGIEPVGLYAVRIVFDDGHNTGLYTWAVLYELAAEH
                     DRKWARYLERLAQAGQPRHPEPTWAE"
     gene            complement(543..1847)
                     /gene="hslU"
                     /locus_tag="VIQ99_09800"
     CDS             complement(543..1847)
                     /gene="hslU"
                     /locus_tag="VIQ99_09800"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013817596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEY9183482.1"
                     /translation="MSMTPREIVEELDKHIIGQQAAKRAVAIALRNRWRRAQIKEPLR
                     SEITPKNILMIGPTGVGKTEIARRLAKLARAPFIKVEATKFTEVGYVGRDVDSIVRDL
                     VDMAVKLVREEAVTRVGDRAADAAEERLLDALLPGSRTDDGRDTRQRFRKMLREGDLD
                     DREVELDLAGAVPGVEIMAPPGMEEMTNQLQSLFQNLHQGRSKRRKLKVEDALALLKE
                     EEAGRLINQEDVKLQAVRAVEEHGIVFIDEIDKIARRAEAHGADVSREGVQRDLLPLV
                     EGCTVSTRYGMVRTDHVLFIASGAFSVAKPSDLIPELQGRFPIRVELASLGVEEFVRI
                     LTEPSASLTEQYRSLLATERFDMRFEASGVRRLAEVAYQVNDRSENIGARRLHTVLER
                     LLETVSFDAADRGGQSVVIDAAYVDTHLKMLVQDEDLSRYIL"
     gene            complement(1852..2382)
                     /gene="hslV"
                     /locus_tag="VIQ99_09805"
     CDS             complement(1852..2382)
                     /gene="hslV"
                     /locus_tag="VIQ99_09805"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018955087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEY9183483.1"
                     /translation="MNEFHGTTIVCVRRNGRVALGGDGQVTLGNQVMKGNARKVRRLH
                     DGKVLAGFAGGAADAFTLFEFFETKLTKHGNLMRAAIELAKDWRTDRMLRRLEALLIV
                     ADDKNSLLISGTGDVIEPEHDLLAIGSGGAYAQAAAQALYENTMLDARAIVDKALTIA
                     GKICIYTNTSITIEEL"
     gene            complement(2428..>2887)
                     /locus_tag="VIQ99_09810"
     CDS             complement(2428..>2887)
                     /locus_tag="VIQ99_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018233197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY9183484.1"
                     /translation="GELVGLNLGDVDAADRTVRVHGKGSKTRVVPVGKHALAALHDWL
                     AVRSELARPGELALFVGRQGARVSPRMVQKHVNDWARRQGAPTRVHPHMLRHSFATHV
                     LESSGNLRAVQEMLGHASLSTTQIYTHLDFQRLAQVYDQAHPRARRRPAE"
BASE COUNT          435 a          990 c          953 g          509 t
ORIGIN      
        1 cacgcatcgt ggttgtcagc gttctcgatc atcgctacgc cgtcgcccgc gggggtcgtg
       61 gccgaacggt agcagcctcg gcgcccgcgg accgagcgcc agcgcacaaa agccggtgtg
      121 accgaagtct agctttgccg ccgcgtcact cggcccacgt cggctccgga tgccgcggtt
      181 ggccggcttg cgcgagccgc tcgagataac gcgcccattt gcggtcgtgc tcggcggcga
      241 gctcgtatag cacggcccag gtgtagagac ccgtgttgtg gccgtcgtcg aacacgatcc
      301 gcacggcgta gaggcccacg ggctcgatgc cggcgatgtt cacgccctct ttgccggtga
      361 cgaggatgcc ctcgccggcc gcgtggccct tgacctcggc cgacggcgaa tgcacacgca
      421 agaattcggc cgacagccgc gcgtgcatgc cgtcggcgaa gcgcacggtc aggtcgcgcg
      481 aacggcggtg cagcgtgatc tcggtcggcg gcggtatcgg cagctcgctc atcgaggaac
      541 gctcacagga tgtagcggct caagtcctcg tcctggacga gcatcttcaa gtgggtatcg
      601 acatacgcgg cgtcgatcac gacgctctgg ccgccgcgat ccgcggcgtc gaagctcacg
      661 gtctcgagca accgctcgag cacggtgtgg agccgccgcg cgccgatgtt ctcgctgcga
      721 tcgttgacct ggtacgcgac ctccgcgagc ctgcgcacgc cgctggcctc gaagcgcatg
      781 tcgaaacgct ccgtcgcgag caggctgcgg tattgctcgg tcagcgacgc gctgggctcc
      841 gtcaagattc gcacgaactc ttcgactccg agcgacgcga gctcgacgcg aatcgggaaa
      901 cggccctgga gctcggggat caaatccgaa ggcttcgcga cgctgaacgc gcccgacgcg
      961 atgaacagca cgtgatcggt gcgcaccatg ccgtaacggg tgctcacggt gcagccttcg
     1021 acgagcggca acagatcgcg ctgcacacct tcgcgcgaga cgtcggcgcc gtgcgcctcg
     1081 gcgcgccgcg cgatcttgtc gatctcgtcg atgaagacga tgccgtgctc ctcgacggct
     1141 ctcacggctt gcagcttcac gtcctcttgg ttgatgagcc ggccggcctc ctcttccttc
     1201 agcagcgcga gggcgtcctc gaccttcagc ttgcggcgct tcgagcggcc ttgatgaagg
     1261 ttctggaaca agctctggag ctggttcgtc atctcctcca tgccgggcgg cgccatgatc
     1321 tccacgccgg gcaccgcacc cgccaagtcg agctcgacct cacgatcgtc gaggtccccc
     1381 tcgcgcaaca tcttgcggaa tcgttgccgc gtgtcgcggc cgtcgtcggt gcgcgacccc
     1441 ggcagcagcg cgtcgagcaa tcgctcttcg gccgcatcgg cggcgcggtc gccgacgcgc
     1501 gtgacggctt cctcgcgcac gagcttgacg gccatgtcga cgagatcgcg cacgatcgag
     1561 tcgacgtcac ggccgacgta gccgacctcc gtgaacttcg tcgcctcgac cttgatgaac
     1621 ggcgctcgag cgagcttcgc gagccggcgc gcaatctcgg tcttgccgac gccggtgggc
     1681 ccgatcatca ggatgttctt cggcgtgatc tcgctgcgca gcggctcctt gatctgtgcg
     1741 cggcgccaac ggttcctgag cgcgatcgcg acagcccgtt tcgcggcttg ttggccgatg
     1801 atgtgtttgt cgagctcctc gacgatttcg cgcggcgtca tggacatggc gctacagctc
     1861 ctcgatcgtg atcgaggtgt tcgtgtagat acagatcttg cccgcgatcg tcagcgcttt
     1921 atcgacgatc gcgcgcgcgt cgagcatcgt gttctcgtac agcgcctggg ccgcggcctg
     1981 cgcgtacgca ccgccggaac cgattgcgag caggtcgtgc tcgggctcga tcacgtcgcc
     2041 ggtgcccgag atcaacagcg agttcttgtc gtcggccacg atcagcagcg cctcgagccg
     2101 gcgcagcatc cgatccgtgc gccagtcctt cgcgagctcg atcgccgccc gcatcaggtt
     2161 gccgtgcttc gtgagcttcg tctcgaagaa ctcgaacagc gtgaacgcat cggccgcgcc
     2221 gcccgcgaag cctgcgagca ccttgccgtc atggaggcgc cgcactttgc gcgcgttgcc
     2281 tttcatgacc tggttgccga gcgtgacctg gccgtcgccg ccgagcgcaa cgcggccgtt
     2341 gcgccggacg cagacgattg tcgtgccgtg aaattcgttc atgggaaaga ttgtaagcca
     2401 gcggcgccga ccggcgcctt cgtgccgcta ctcggccggc cggcggcgcg cgcgcgggtg
     2461 cgcctggtcg tagacctgcg cgagacgctg gaaatcgaga tgggtataga tctgcgtcgt
     2521 cgacaggctc gcgtggccca gcatctcctg gactgcgcgc agatttccgc tcgactcgag
     2581 cacgtgcgtg gcaaacgagt gccgcagcat gtggggatgc acgcgcgtag gggcaccctg
     2641 gcggcgcgcc cagtcgttca cgtgcttctg caccatgcga gggctcacgc gcgcaccttg
     2701 gcggccgacg aacagcgcga gctcgccggg cctcgcgagc tcgctacgca cggcgagcca
     2761 gtcgtgcagc gccgcgagcg cgtgcttgcc gaccggaacg acgcgagtct tcgagccctt
     2821 gccgtgcacg cgcacggtcc gatcggccgc gtcgacgtcg ccgagattca aacccacgag
     2881 ctcgccc
//
LOCUS       DATCUD010000674         2957 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56308, whole genome shotgun sequence.
ACCESSION   DATCUD010000674 DATCUD010000000
VERSION     DATCUD010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2957
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56308"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1088)
                     /locus_tag="VIQ99_09815"
     CDS             complement(<1..1088)
                     /locus_tag="VIQ99_09815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012909160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
                     /protein_id="HEY9183485.1"
                     /translation="MRTRDTTGLPPAQGLYRPEFEHDSCGVGFVAHIKGKRSHKIVED
                     ADHLLCRMDHRGARGAEPNTGDGAGMLTALPHEFLAKVAKQACGATLPGAGKFAAGVV
                     FLPTDPAERARCKDVVAAICAEEGQVLVGWRTVPTNADAADLGHGARDAAPHIEQLFV
                     AAGNGFEGDVFERKLYLLRKRASHRLRGDTTLKQAKYFYVCSLSSKVLIYKGMLTPGQ
                     LLNFYPDLRDPDYTTHLAMVHSRFSTNTFPSWDRAQPNRYMSHNGEINTLRGNENWMR
                     ARQGVVASPLFGEDLKKLFPIAEPDCSDSGVFDNVLEFLLMTGRTLQESVMMMIPEAW
                     QKNELMPEKKRAFYEYHSCLMEPWDGPAS"
     gene            complement(1404..2099)
                     /gene="pdsR"
                     /locus_tag="VIQ99_09820"
     CDS             complement(1404..2099)
                     /gene="pdsR"
                     /locus_tag="VIQ99_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010132152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proteobacterial dedicated sortase system
                     response regulator"
                     /protein_id="HEY9183486.1"
                     /translation="MSSNKLVAVVEDEVAIRDNYLAGLRRQGYRVTGYGSRKEALAGF
                     ASRLPDLVIIDVNLGTEVEGGFELCRELRARSAQLPIIFLTARESELDAVSGLRLGAD
                     DYLTKRTSIEHLLARVAALFRRVEALRAGDSPGERLEQGSLTLDRDRMSAQWKSQPVP
                     LTLTEFWVVHALAVHPGHVRSREQLMAAANVVLDDATVTSQIKRIRAKFAAVDPAFDA
                     VETVYGMGYRWRS"
     gene            2233..2913
                     /locus_tag="VIQ99_09825"
     CDS             2233..2913
                     /locus_tag="VIQ99_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011588692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY9183487.1"
                     /translation="MTKHSFSRTGAVALGLVMTLSACTVLDPYTREEEPAKAQRQAVI
                     GAAAGAAVGLITGDSSMERKKRALIGAGLGALAGASVGAYMDRQEAKLRAELERTGVS
                     VTRDGDNITLNMPGNITFATNSADLNASFFDVLNSVGLVVNEFDQTVIEVAGHTDSTG
                     SEEYNQQLSQRRATAVATYLGTRNVRMDRIIPVGSGETYPVASNDTEAGRQQNRRVEL
                     TLVPLTLS"
BASE COUNT          511 a          966 c          957 g          523 t
ORIGIN      
        1 gacgccggcc cgtcccacgg ctccatcaga cacgagtgat actcgtagaa cgcccgcttt
       61 ttctcgggca tcagctcgtt cttctgccat gcctcgggaa tcatcatcat cacggattcc
      121 tgcaacgtgc gtcccgtcat cagcaggaac tcgagcacgt tgtcgaacac gccggagtcc
      181 gagcagtccg gctccgcgat cgggaacagc ttcttcaagt cttcgccgaa caacgggctt
      241 gcgacgacgc cttggcgcgc gcgcatccaa ttctcgttgc cgcgcaaggt gttgatctcg
      301 ccgttgtgcg acatgtaccg gttcggctgc gcgcggtccc agctcgggaa cgtgttcgtc
      361 gagaaccgcg agtgcaccat cgcgaggtgg gtcgtgtagt cggggtcgcg caggtcggga
      421 tagaagttca gcagctgacc cggtgtcagc atgcctttgt agatcagaac cttgctcgac
      481 agactacaga cgtagaaata cttggcctgc ttcaaggtcg tgtcgccgcg caatcgatgg
      541 ctcgcgcgct tgcgcagcaa atacagcttg cgctcgaaga cgtcgccctc gaacccgtta
      601 ccggctgcca cgaacagctg ctcgatgtgc ggcgccgcgt cacgcgcgcc gtggccgaga
      661 tccgcggcgt ccgcgttcgt cggcactgtg cgccagccga cgagcacctg cccttcctcg
      721 gcgcagatcg cggctacgac gtccttgcat cgcgctcgct cggccggatc ggtcggcagg
      781 aacacgacgc ccgcggcgaa cttgccggcg cccggcagcg tcgcgccgca cgcttgcttc
      841 gcaaccttcg ccagaaattc gtgcggcaaa gccgtgagca tgcccgcgcc gtcgccggtg
      901 ttcggctcgg cgccgcgcgc gccgcgatgg tccatgcggc acaagaggtg atcggcgtcc
      961 tcgacgatct tgtggctgcg cttgcctttg atgtgcgcga cgaagcccac gccgcagctg
     1021 tcgtgctcga attcgggccg atacaaccct tgcgccggcg ggaggccggt agtgtctcgt
     1081 gtgcgcatgc ttgcctacct catgccgtaa gagcgcccac gagcctactg gccgccaccc
     1141 gtttcgggtc gccggcgctt ttcaagctcg ttttggtcgc tcttacagtc atggctctat
     1201 atggcggtca gccgttgggc ttccgctcgg cgtttgttct tgctggctgg cagttgcgat
     1261 gctggacctg tcaagccgcc ggccattcga cttgccgcgg aaaggtccaa tttcgaagga
     1321 ccgaagcagg cctcaagcca acgccagact atagggaacg cgtgcgcgtc gcgtcaattg
     1381 cgtcgtggag gaccccgctc cgctcaggac cgccagcggt aacccatgcc gtagacggtc
     1441 tcgacggcgt cgaacgcggg gtcgacggcc gcgaacttag ctcggatgcg cttgatctgc
     1501 gaagtcaccg tggcgtcgtc gagcacgacg ttggccgccg ccatgagctg ctcgcggctg
     1561 cggacgtgtc ctgggtgcac cgcgagtgcg tgcacgaccc aaaactccgt cagcgtcagc
     1621 ggcaccggct gcgacttcca ctgggcgctc atgcggtcgc gatcgagcgt cagactgcct
     1681 tgctcgagcc gttcgccggg cgaatcgcct gcccgtaacg cctcgacgcg ccgaaacagt
     1741 gcggccacgc gggcgagcag atgctcgata ctggtgcgtt tcgtgaggta gtcgtcggcg
     1801 ccgagcctca atcccgagac ggcgtcgagc tcgctctccc tggcggtcag gaagatgatc
     1861 ggcagttgcg ccgagcgcgc ccgtagctct cgacacagct cgaacccacc ttccacctcg
     1921 gtgccgagat tcacgtctat gatcacgagg tcgggcaggc ggctcgcgaa cccggcgagc
     1981 gcttccttgc ggctgccgta accggttacg cgatagccct ggcggcgaag cccagccaag
     2041 tagttgtcgc gtatcgcgac ctcgtcttcg acgacggcga ccagcttgtt cgatgacata
     2101 tcgacggggt ggaagtccta cgccgggggt ggcagcgccg agcactgcgg aaccggattc
     2161 ggagcgccaa gtcacatttc gttcaggtta cgcttggcat gataaccgcg gtaacttcag
     2221 gaggtacgca caatgacgaa gcatagcttc tctaggacag gcgccgttgc gctcggcctc
     2281 gtcatgacac tgtcggcttg cacggtgctc gatccctaca cgcgggagga agagcccgcc
     2341 aaggcacaac ggcaagcggt cattggggcc gccgccggcg cggcggtagg cttgatcacc
     2401 ggcgacagct cgatggagcg caagaaacgc gctctcatcg gcgcgggcct cggcgccctg
     2461 gccggcgcca gtgtcggtgc ctacatggac cgacaggagg cgaagctgcg ggcagagctc
     2521 gagcggaccg gcgtcagcgt cacgcgcgac ggcgacaaca tcacgttgaa catgcccggc
     2581 aatatcacgt tcgccacgaa cagtgcggac ttgaacgcga gcttcttcga cgtgttgaac
     2641 tcggtaggcc tcgtggtcaa cgagttcgat caaacggtca tcgaagtcgc gggtcacacc
     2701 gatagcacgg gcagcgagga gtacaaccag cagctgtccc agcgccgcgc gacggccgtc
     2761 gcgacctatc tcgggacccg gaacgtgcgg atggatcgga tcatcccggt cggcagcggc
     2821 gagacgtacc cggtcgccag caacgacacg gaggccggcc gtcagcagaa ccggcgggtc
     2881 gagctcacgc tcgtgccgtt gacgctgagc tagagcgaag cgagccagga aggacgcggg
     2941 gcgcgccgtt acacggc
//
LOCUS       DATCUD010000675         2033 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91817, whole genome shotgun sequence.
ACCESSION   DATCUD010000675 DATCUD010000000
VERSION     DATCUD010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2033)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2033
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91817"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..572)
                     /locus_tag="VIQ99_09830"
     CDS             complement(<1..572)
                     /locus_tag="VIQ99_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009110637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEY9183488.1"
                     /translation="MEFLITAFDYFLHVDRHLLEFATTYGVWIYALLFLIIFLETGVV
                     VTPFLPGDSLLFAVGALAAAGVVDLVGVLALLTAAAIIGDNTNYFIGRAVGPRVFTEH
                     SRWLKRQHLLRTQHFYEKHGGKTVVLARFVPIVRTFAPFVAGIGAMTYARFLVYNVAG
                     GVLWVAVCLFAGYFFGNLPVVKANFSLVIIA"
     gene            complement(625..>2033)
                     /locus_tag="VIQ99_09835"
     CDS             complement(625..>2033)
                     /locus_tag="VIQ99_09835"
                     /inference="COORDINATES: protein motif:HMM:NF012544.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY9183489.1"
                     /translation="GPAIIVSFIITGTLCALVALSYAELASAIPVSGSAYSYSYASLG
                     EVAAWIMGVLLVLEYGLAASTVAVGWSGYVASFMHDLGLDIPVSLRGAWGTPVTDFVT
                     GDVVGTGVVNLPAVVAIVAVTGLLVLGVSESAFVNNIVVAIKVTVVVAFIAIGSFFVD
                     PALWTPLVPAAVPPPVGEPGLMSEIGSALLAVVTAQNTGQYGIPGIITAAATIFFAYI
                     GFEAVSTAGAESRNPRRDMPIGILGSLIICTILYILTSAVLVGIVPYTDLNDPAPIAK
                     AVNQIGLPWFAVLVKIGAIAGLSSVMLVLLYGQTRIFYTMARDGLIPPVFSQVHRKFK
                     TPWINTLIVGVLACGFAGFMGLDALANLTNVGTLLAFAIVCITVIYLRFARPEMQRAF
                     RTPLFPLTPLLGAAMCLFLLMSLMAHDATRNFFLVYLAGGIVLYFVYGMWNSKLGKGI
                     VVHGHEVLAESPHRKGLD"
BASE COUNT          453 a          645 c          651 g          284 t
ORIGIN      
        1 gcgatgatca ccagcgagaa gttggccttc accaccggca ggttgccgaa gaagtagccg
       61 gcgaagaggc agacggctac ccagaggacg ccgccggcca cgttgtagac caggaagcgc
      121 gcgtaggtca tggctccgat cccggccacg aacggcgcga acgtgcgcac gatcggcacg
      181 aagcgcgcga gcacgaccgt cttgccgccg tgtttctcgt aaaaatgctg ggttctgagc
      241 aagtgctggc gtttcagcca gcggctatgc tccgtgaaca cgcgcggccc gaccgcacgg
      301 ccgatgaagt agttcgtgtt gtcgccgatg atcgcggcgg ccgtcagcag cgcgagcacg
      361 ccgacgaggt cgacgactcc ggcggccgcg agggcgccga cggcaaacag cagcgaatcg
      421 ccgggcaaga acggcgtcac gacgacgccc gtctcgagaa agatgatcag gaacagcagc
      481 gcgtagatcc acacgccgta agtggtcgcg aactcgagga gatggcggtc gacatgcagg
      541 aagtagtcga acgctgtgat caggaattcc atgacgcctc cctcagccga ggatcgccgg
      601 accgcacggt cttaagcgaa gcgctcagtc caacccttta cgatgaggcg attccgccag
      661 gacctcgtgg ccgtgaacga cgatgccctt gccgagtttg gaattccaca tgccgtacac
      721 gaagtagaga acgatgccgc ccgcgagata caccaggaag aagttccgag tggcgtcgtg
      781 ggccatcagt gacatcagca agaacaagca catcgccgcg cccaacaacg gcgtcaacgg
      841 gaacagaggc gtcctgaacg ctcgctgcat ctccggacga gcgaagcgga ggtagatcac
      901 ggtgatgcag acgattgcga atgcgagcag cgtgccgacg ttggtcaggt tcgcgagcgc
      961 atcgagcccc atgaagcccg cgaaaccgca agcgagcacc ccgacgatca gcgtgttgat
     1021 ccacggggtc ttgaattttc gatgaacctg cgagaacacg ggaggaatca agccgtcgcg
     1081 cgccatggtg tagaagatcc gggtttggcc gtacagcaac acgagcatca cggacgatag
     1141 acccgcgatc gcaccgatct tcacgagcac tgcgaaccac ggcagcccga tctgattcac
     1201 ggccttcgcg atcggggccg ggtcgttcaa gtccgtgtac ggcacgatgc cgacgagcac
     1261 ggcggacgtg aggatgtaca gaatcgtgca gatgatcagc gatcccaaga tgccgatcgg
     1321 catgtcgcgc cgcggattcc tcgattccgc gccggccgtc gacacggctt cgaagccgat
     1381 gtaggcgaag aagatcgtcg cggccgccgt gatgatgccg gggatgccgt actggcccgt
     1441 gttctgcgcc gtgacgacgg ccaggagcgc cgagccgatc tcgctcatga ggccgggctc
     1501 accgaccggc ggcggcacgg cggccggaac caacggcgtc cacagcgcgg gatccacgaa
     1561 gaagctgccg atcgcgatga acgcgacgac gaccgtgacc ttgatcgcga cgacgatatt
     1621 gttcacgaac gccgattccg aaacgccgag caccaacaag cccgtgacgg ccacgatcgc
     1681 gaccacggcc ggcaggttca cgacaccggt cccgaccacg tcgccggtca cgaagtcggt
     1741 gaccggcgtt ccccacgctc cgcggagact gactgggata tctagcccta agtcgtgcat
     1801 gaagctcgcg acgtaccccg accaaccgac cgcgaccgtc gaggccgcga ggccgtactc
     1861 gagcaccagc agcacgccca tgatccaagc ggcaacctcg ccgagcgacg cgtacgagta
     1921 cgagtacgcg gaccccgaga ccggaatcgc cgatgcgagc tctgcatacg acaacgcgac
     1981 gagcgcgcac aacgtgcccg tgatgatgaa cgagacgatg atcgcgggac ccg
//
LOCUS       DATCUD010000676         2791 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42006, whole genome shotgun sequence.
ACCESSION   DATCUD010000676 DATCUD010000000
VERSION     DATCUD010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2791
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42006"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1400)
                     /locus_tag="VIQ99_09840"
     CDS             complement(<1..1400)
                     /locus_tag="VIQ99_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008600424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016903 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HEY9183490.1"
                     /translation="MESQSVVVRFAGDSGDGVQLMGTQFVAATALAGNDFATFPDYPA
                     EIRAPAGTTFGVSAYQIHLGARPITTAGDAPHVLVAFNPAALKVNLPLIADGALIVLN
                     IDSFTSRGLAKAGYEKDPRQSGVLDGYQVIEVDITKHTMEATEAFGLSKSDAGRCKNF
                     WALGLVQWMFNRDVKAIEGWINGKFAKDPTIRDANLAALRAGHAYGETAELTAAVPHV
                     GTGIAQFPPGEYRGIRGSEALALGLAAAGELADKPIVFCSYPITPASPLLHQLARYGN
                     LGIGTFQAEDEIAAVCAALGASYGGAIGVTSSSGPGIALKTEAIGLAMNAELPLVVVD
                     SQRGGPSTGLPTKTEQSDLYLAVYGRNADAPVPVLAARSPSDCFEVAIEAVRIAVRHM
                     TPVILLTDGYLANAAEPWRLPNIDEIPRIDVNVPGERAEGQDVPTFIFKRDPATLGRP
                     WVAPGMPGLMYRVGGI"
     gene            1682..2002
                     /locus_tag="VIQ99_09845"
     CDS             1682..2002
                     /locus_tag="VIQ99_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY9183491.1"
                     /translation="MPKVTYIQPDGRPRVVEAAPGTTLMEAAVDNDVAGIVAECGGAC
                     SCATCHVYVDPAWADKLRPPDAQEDGMLGCVLDRRPTSRLSCQVVLTPALDGLVVEVA
                     KEQI"
     gene            2069..2392
                     /gene="fdxA"
                     /locus_tag="VIQ99_09850"
     CDS             2069..2392
                     /gene="fdxA"
                     /locus_tag="VIQ99_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005409054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEY9183492.1"
                     /translation="MTFVVTEACIKCKYTDCVEVCPVDCFHEGPNMLVIDPEECIDCT
                     LCEPECPVEAICAEDDVPAGQEQFLKLNAELAKGWPVITKAKAAPADADDWKDVKDKL
                     KLLER"
     gene            complement(2402..>2791)
                     /locus_tag="VIQ99_09855"
     CDS             complement(2402..>2791)
                     /locus_tag="VIQ99_09855"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEY9183493.1"
                     /translation="ELYELRADAEAVSYYVTPPATTGGLGLHTKAVVIDRERAFVGSP
                     NVDPRSMVLNTEIGVVGAGTELAARVAALIDRDIAPANSWRVTMDEEGWLTWSSADRV
                     VRRQPAKGFIQRATEFLLNLLPLKNQA"
BASE COUNT          471 a          945 c          921 g          454 t
ORIGIN      
        1 tcgatgccgc cgacgcggta catgagaccc ggcatgccgg gcgcgaccca cggcctgccc
       61 aacgtcgcgg gatcgcgctt gaaaatgaac gtcggcacgt cctggccctc ggcgcgctcg
      121 ccgggcacgt tgacgtcgat gcgcggaatc tcgtcgatgt tcggcaagcg ccacggctcc
      181 gccgcgttcg cgaggtagcc gtcggtcagc agaataacgg gcgtcatgtg ccgcacggcg
      241 atgcgcacgg cctcgatcgc gacctcgaag cagtcgctcg ggctgcgcgc ggcgagcacg
      301 ggtaccggcg cgtcggcgtt gcggccataa acggcgagat agaggtccga ctgctcggtc
      361 ttcgtcggca agcccgtcga tggcccgccg cgctgcgagt cgacgaccac gagcggcaac
      421 tcggcgttca tcgcaagacc gatcgcttcg gtcttcaacg cgatgccggg tcccgagctc
      481 gacgtcacgc cgatcgctcc gccgtacgac gcgccgagcg cggcgcacac ggccgcgatc
      541 tcgtcctcgg cctggaacgt gcctataccc aagttgccgt agcgcgcgag ctgatgcagc
      601 agcggcgatg ccggcgtgat cggatacgag caaaacacga tcggcttgtc ggcgagctcg
      661 ccggctgcgg ccagtcccaa cgcgagcgcc tcgctgccgc ggatgccgcg gtattcgccc
      721 ggaggaaatt gcgcgatgcc ggtgccgacg tgcggcaccg cggccgtcaa ctcggccgtt
      781 tcaccgtagg cgtggccagc gcgaagcgcc gcgaggttcg cgtcgcgaat cgtgggatcc
      841 ttcgcgaact tgccgttgat ccagccctcg atcgccttga cgtcgcggtt gaacatccac
      901 tgcacgagcc ccagtgccca gaagttcttg cagcgccccg catcgctctt gctcaagccg
      961 aaggcctcgg tggcttccat cgtgtgcttc gtgatgtcga cctcgatgac ttgatagccg
     1021 tcgagcaccc cgctctgacg cgggtccttc tcgtagccgg ccttggcgag gccgcggctc
     1081 gtgaagctat cgatgttcag aacgatcaac gcgccgtccg cgatcaacgg caagttgact
     1141 ttcagagcgg ccggattgaa ggcgaccagc acatggggcg cgtcgccagc cgtcgtgatc
     1201 ggccgagcgc cgagatgaat ctgatacgcg gagacgccga acgtcgtgcc ggccggggcg
     1261 cggatctcgg ccggatagtc cgggaacgta gcgaagtcgt tgccggcgag cgccgtggcg
     1321 gccacgaact gcgtgcccat cagctgcacg ccgtcgcccg agtcgccggc gaatcgaaca
     1381 actaccgatt gcgattccat gctgctaccc gtcgccctac gttgccactt ccgccagacc
     1441 taccgttgcc gaccacttgc gcgcccgtcg ccgcgcacga gctccgcgcg cgacgtgaat
     1501 tcatggccgg ggtctcatgc tccgaccgct cgaggcgacg gcgtccgcat ttgagcgaag
     1561 gctcacgacc ggcctcgatt gcccggtgag caacatgagc gggtattata gccggccagc
     1621 cgaacagtca ggcaattcaa gtgcataagc atattgctcc ggcagcgcgg ggggccccgg
     1681 catgcccaag gtgacctata ttcagccgga cggccgaccg cgggtcgtcg aggccgcgcc
     1741 cggaacgacc ctgatggaag ccgccgtcga caacgacgtc gccggcatcg tcgccgagtg
     1801 cggcggagcc tgctcttgcg cgacgtgcca cgtctacgtg gaccccgcgt gggccgacaa
     1861 gctgcgaccg cccgacgccc aagaggacgg catgttgggc tgtgtgctgg accgccgtcc
     1921 gacgagccgc ctgagctgcc aggtcgtctt gacaccggcg ctggacgggc tcgtcgtcga
     1981 ggtcgccaag gagcagatct agcggctgcg tggcgttttg taggagaatc ccggcccgtt
     2041 cgaccgagat tagtaacgga gcgagagcat gaccttcgtc gtcaccgaag cctgtatcaa
     2101 gtgcaagtac accgactgcg tcgaggtgtg cccggtcgat tgcttccacg aaggcccgaa
     2161 catgctcgtg atcgatccgg aggagtgcat cgactgcacg ctgtgtgagc cggagtgccc
     2221 cgtcgaagcg atttgcgccg aggacgacgt gcccgcgggc caggagcagt tcctgaagtt
     2281 gaacgccgag ctcgcgaaag gatggcccgt gatcaccaag gccaaagcgg ctccggcgga
     2341 cgccgacgac tggaaggacg tcaaggacaa gctgaagctc ttggagcgct agcgcgctcg
     2401 ctcacgcttg gttcttgagc ggcagcaggt tcagcaggaa ctctgtcgct cgctgaatga
     2461 atcccttcgc gggttgccgc cgcacgacgc gatccgcgct cgaccacgtc agccagccct
     2521 cctcgtccat cgtcacccgc caggagttcg cgggcgcgat gtctcggtcg atcaacgccg
     2581 cgacgcgcgc agcgagctcg gttcccgcgc cgacgacgcc gatctccgtg ttcagcacca
     2641 tcgaccgagg atcgacgttc ggcgacccga cgaacgctcg ctcgcggtcg atgaccacgg
     2701 ccttcgtgtg caggccgagc ccgccggtcg tcgccggcgg agtcacgtag tacgacaccg
     2761 cttcggcgtc ggcgcgcagc tcgtagagct c
//
LOCUS       DATCUD010000677         1564 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105670, whole genome shotgun sequence.
ACCESSION   DATCUD010000677 DATCUD010000000
VERSION     DATCUD010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105670"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..327
                     /locus_tag="VIQ99_09860"
     CDS             <1..327
                     /locus_tag="VIQ99_09860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEY9183494.1"
                     /translation="VAAAAAAAVGPAFHVLPGKKVLEIKAATVGKGRAIAEFMAEPPF
                     AGRCPVFVGDDLTDEDGFEIVNTLGGHSIAVGVGRDTRARWRLADEAHVLRWVESHGD
                     ARGAAS"
     gene            324..>1564
                     /locus_tag="VIQ99_09865"
     CDS             324..>1564
                     /locus_tag="VIQ99_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013030648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEY9183495.1"
                     /translation="MSNLDLALIGNCQIAALLDRRARIVWACVPRFDGDPTFCSLLSG
                     EAEPTAGFCDVELAGFATSEQRYVTNTAVVETVLRDASGGAVKIIDFAPRFLRHARSY
                     RPMMLIRMIVPLTGRPKIRLRVRPLGDYGAARPTLTYGSNHIRYVLPSITLRVTTDAS
                     ITALLEERSFVLDHSLAFVLGPDETLMDAPASTARHFLAETQSYWETWARGLSIPFEW
                     QDAVIRAAVTLKLCTFEDTGAVVAGITTSIPEAPNSGRNWDYRYCWLRDAYFVVHAMN
                     RLGATATMEQYLRYIINVGTESAGHDLQPVYAISGESRLPERVVDSLAGYRGMGPVRV
                     GNLAYEQRQNDVYGSVVLASMQYFFDQRLVTRGDVATFERLERLGEHAVSRFDTPDAG
                     LWEYRGRQRVHTFSAVMCWAA"
BASE COUNT          250 a          520 c          515 g          279 t
ORIGIN      
        1 gtcgccgcgg cggccgcagc ggcggtcggg cctgcatttc acgtgctgcc cggcaagaag
       61 gtgctcgaga tcaaagctgc gactgtcggc aaaggccgtg cgatcgcgga gttcatggcg
      121 gagccgccgt tcgcgggccg ctgcccggtg ttcgtcggcg acgacctcac cgacgaggac
      181 gggttcgaga tcgtgaacac gctcggcggc cactcgatcg ccgtaggcgt cggcagggac
      241 acgcgcgcac gttggcggct cgccgacgaa gcgcacgtgc tgcggtgggt cgagtcgcac
      301 ggcgatgcgc gcggagctgc atcatgagca atctagacct cgcgttgatc ggcaactgcc
      361 agatcgctgc gctgctcgat cggcgcgccc ggatcgtgtg ggcgtgcgtc cctcggttcg
      421 acggcgaccc gacgttctgc tccttgctca gcggtgaagc cgagcccacg gccggctttt
      481 gcgacgtcga gctcgccggt ttcgcgacca gcgagcagcg ttacgtgacg aacacggccg
      541 tcgtcgagac ggtgcttcgc gacgcgagcg gcggcgcagt caagatcatc gacttcgcgc
      601 cgcggttcct gcggcacgcg cgctcctatc ggccgatgat gctgatccgg atgatcgtgc
      661 cgctcacggg tcgccccaag attcgcctgc gcgtgcgccc gctcggagac tacggagcgg
      721 cacgaccaac tttgacgtat ggcagcaacc acatccgcta cgtgctgccc agcatcacgc
      781 tgcgcgtaac gaccgacgcg tcgatcacgg ccctgctcga ggaacgctcg ttcgttctcg
      841 atcattcgct cgcgttcgtg ctcggcccgg acgagacgct gatggacgcg cccgcgagca
      901 ccgcgcgaca ttttctcgcc gagacgcaaa gctactggga aacctgggcc cgcggtctat
      961 cgataccgtt cgagtggcag gacgccgtga ttcgcgccgc ggtcactctg aagctctgca
     1021 cgttcgagga taccggcgcc gtcgtcgccg gtatcacgac atcgatcccc gaagccccga
     1081 acagcggccg caactgggac tatcgctatt gttggctccg cgatgcctac ttcgtcgtgc
     1141 atgcgatgaa ccgactcggt gcgactgcga cgatggagca gtacctgcgt tacatcatca
     1201 acgtcggcac cgagtccgcg ggacacgatt tacagcccgt gtacgcgatc agcggcgagt
     1261 cccgtctgcc cgaacgagtc gtcgattcgc tcgcagggta tcgtgggatg ggccccgtgc
     1321 gtgtcggcaa cctggcctac gagcagcggc agaacgatgt ctacgggtcc gtcgtgctcg
     1381 cgtccatgca gtatttcttc gaccagcgac tggtcactcg cggcgacgtc gcgaccttcg
     1441 aacgcctcga acgtctcggc gagcatgcgg tatcccgctt cgacacgccc gacgccggtc
     1501 tctgggagta ccgcgggcga caacgcgtcc atacgttctc tgcggtgatg tgctgggcgg
     1561 cgtg
//
LOCUS       DATCUD010000678         2854 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42010, whole genome shotgun sequence.
ACCESSION   DATCUD010000678 DATCUD010000000
VERSION     DATCUD010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42010"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..755)
                     /locus_tag="VIQ99_09870"
     CDS             complement(75..755)
                     /locus_tag="VIQ99_09870"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY9183496.1"
                     /translation="MDESRGAARPQALTIRVISVVTVHGLWMRGASMALLRRRLEPHG
                     FQIYEFTYPSVRQTLTANAAALAAFVAATPGHTVHLIGHSLGGVVIREMLESRDARSA
                     RVGRVVCLGSPLRGSRTAARLARLPGGRYAIGKGIAELNERGGFTAWVAGSEAGSIAG
                     RVPFGLGRLFGPFREPNDGTVAVAETRVDGADHVVLPVSHFAFLWSKRVAEQIEHFLL
                     HGRFSGAA"
     gene            complement(704..1153)
                     /gene="nudB"
                     /locus_tag="VIQ99_09875"
     CDS             complement(704..1153)
                     /gene="nudB"
                     /locus_tag="VIQ99_09875"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011481825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEY9183497.1"
                     /translation="MAALAEFKRPESVLVVVHTPKLDCLLLERLEPRGFWQSVTGSLR
                     AAETPAECAVRELQEETGLAGEGLRDAHVQRSFPILPAWRSRYAPDVSSNLEHLWYLE
                     LPEICAVRIEPTEHVAYLWLPVDAAIEKVASWTNREALLDLKRSRSA"
     gene            complement(1161..>2854)
                     /gene="aspS"
                     /locus_tag="VIQ99_09880"
     CDS             complement(1161..>2854)
                     /gene="aspS"
                     /locus_tag="VIQ99_09880"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012969945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEY9183498.1"
                     /translation="RRDHGGVIFIDLRDREGLLQVVFDPDRAEMFKEAERLRSEFVLL
                     VEGRVRARPEGTVNPNLASGEVEVLATKLTVLAKAKTPPFHHDEPVSEELRLRYRYLD
                     LRREPMLKNLRLRHAVTRALRFFMDEHGFVDVETPILTKTTPEGARDYLVPSRTQQGN
                     FFALPQSPQLMKQLLMMSGLDRYYQIVKCFRDEDLRADRQPEFTQLDIETSFMSEEDI
                     LVLMEQLLRETFKSVLGVELPKPFPRMTYADAMRRYGSDKPDLRNPLELVEVADLFRG
                     VEFKVFAGPAADPKSRIAALRLPKGGELTRKEIDDYTALVGRHGAKGLAYIKVNERTK
                     GRDGLQSPILKFLPDAAIEGVLERTGAVDGDLVFFGADKAGVVNESLNALRTALGRDR
                     KLLNGEWAPLWVVDFPLLEQLPGGGWTPLHHPFTSPRDASAAALRAAPGAAIARAYDI
                     VLNGYEVGGGSVRIHDPELQSAMFDLIGITKEEAELKFGFLLTALDYGAPPHGGIAFG
                     VDRLVMLMAGADNIRDVIAFPKTATASDLMTGAPSPADATQLKELGIRFKSSAPG"
BASE COUNT          492 a          986 c          925 g          451 t
ORIGIN      
        1 cggcggtcat cgccttatga tccgtcaagg gcaccatgat gcccgagacc cgtccgcgac
       61 gactgcgaca ctcgtcatgc tgcgccgcta aaacggccgt gcaacaggaa gtgctcgatc
      121 tgctccgcaa cccgcttcga ccacaggaac gcgaagtgcg ataccggcag cacgacgtgg
      181 tcggcaccgt cgacgcgtgt ctcggcgacg gcgaccgtac cgtcgttcgg ctcccgaaac
      241 gggccgaaca aacgcccgag cccgaatggc acgcggcccg cgatgctgcc ggcctcgctt
      301 ccggcgaccc acgcggtgaa accgccacgc tcgttcagct ccgcgatccc cttgccgatc
      361 gcataacggc cgcccggcag ccgcgcgagt cgcgcggcgg ttcgactgcc gcgcaacggc
      421 gaacccaagc acacgacgcg gccgactcgc gcgctgcgcg cgtcgcgcga ctcgagcatc
      481 tcgcgaatca cgacgccgcc caagctgtga ccgatcagat gcacggtatg ccccggcgtc
      541 gcggcgacga aggccgcgag cgccgcggcg ttggccgtga gcgtctgcct cacggagggg
      601 tacgtgaact cgtagatctg aaaaccgtgc ggctcgagcc gccgccggag cagcgccatc
      661 gacgcgcccc gcatccacaa gccgtgaacg gtgacgacgg agatcacgcg gatcgtgagc
      721 gcttgaggtc gagcagcgcc tcgcgattcg tccacgacgc gaccttctcg atcgcggcgt
      781 cgaccggcaa ccacagatag gcgacgtgct cggtcggctc gatacgcacg gcacagatct
      841 cgggcagctc gagataccac aggtgctcca agttgctgct gacgtcgggc gcataccgcg
      901 aacgccacgc cggcaggatc gggaacgagc gttgcacgtg agcgtcgcgc aagccttccc
      961 cggcgagccc cgtttcctct tgcagctcgc gcaccgcgca ctccgcgggc gtttcggccg
     1021 cacgcaagct gccggtcacg gactgccaaa agccgcgcgg ctcgaggcgt tcgagcagca
     1081 ggcagtcgag tttcggcgtg tgcacgacga cgagcacgga ttccggccgc ttgaactccg
     1141 cgagggcggc catcgcgcgc tcagcccggc gcggagctct tgaagcggat gccgagctcc
     1201 ttgagctgcg tcgcgtcggc ggggctcggc gcgccggtca tcaagtcgct ggcagtcgcg
     1261 gtcttcggga acgcgatcac gtcgcggatg ttgtctgcac cagccatcag catcacgagg
     1321 cggtcgacac cgaaagcgat gccgccatgc ggcggcgcgc cgtagtcgag cgccgtgagc
     1381 agaaagccga acttgagctc ggcttcttct ttcgtgatgc cgatcaaatc gaacatcgcc
     1441 gactgcagct ccggatcgtg gatacgcacc gaaccgccgc cgacttcgta cccgttcaac
     1501 acgatgtcgt aggcacgcgc gatcgcggca ccgggcgccg cacgcaacgc cgcagccgag
     1561 gcgtcgcgcg gcgacgtgaa aggatggtgc aacggcgtcc agccgccgcc cggcaattgc
     1621 tcgagtagcg ggaaatcgac gacccacagt ggcgcccatt cgccgttcaa gagcttgcgg
     1681 tcgcggccga gcgcggttcg cagcgcgttc agcgattcgt tgacgacacc tgccttgtcg
     1741 gcgccgaaga acacgagatc gccgtcgacg gcgcccgtgc gctcgagcac gccctcgatc
     1801 gcagcgtccg gcaagaactt caggatcgga gactgcagac cgtcccgacc tttcgtgcgc
     1861 tcgttgacct tgatgtacgc gagccctttc gcgccgtggc gaccgacgag cgccgtgtag
     1921 tcgtcgatct ccttgcgcgt gagctcgccg cctttcggca ggcgcagcgc cgcgatgcgg
     1981 ctcttcgggt cggccgccgg gcccgcgaac accttgaact cgacgccgcg gaacaggtcc
     2041 gcgacttcga cgagctcgag cgggttcctg agatcgggct tgtcgctgcc gtaacggcgc
     2101 atcgcatccg cgtacgtcat gcgcgggaac ggcttcggca attcgacgcc gagcacggac
     2161 ttgaaggtct cgcgtaatag ctgctccatg agcacgagga tgtcttcctc gctcatgaag
     2221 ctggtttcga tatcgagctg cgtgaactcg ggctgccggt ccgcgcgcaa gtcctcgtcg
     2281 cggaagcact tcacgatctg atagtagcga tcgaggcccg acatcatcag cagctgcttc
     2341 atgagctgcg gcgactgcgg cagcgcgaag aagttgccct gctgcgtgcg gctcggcacg
     2401 agatagtcgc gagcgccttc gggtgtcgtc ttcgtcaaga tcggagtctc gacgtcgacg
     2461 aagccgtgct cgtccataaa aaagcgcagc gcgcgcgtca ctgcgtgccg caaccgcagg
     2521 ttcttcagca tcggctcgcg gcgcaggtcg agatagcgat accgcaaccg cagctcctcg
     2581 ctgacgggct cgtcgtggtg gaacggcggc gtcttcgctt tcgcgagcac cgtgagcttc
     2641 gtcgcgagca cctcgacctc gccgctcgcg aggttcggat tcaccgtgcc ttcggggcgt
     2701 gcgcgcacgc ggccctcgac gagcagcacg aactccgagc gcaaccgctc ggcctccttg
     2761 aacatctccg cgcgatcggg atcgaacacg acctgcagca gtccctcgcg gtcgcgtaag
     2821 tcgatgaaga tcacgccgcc gtgatcgcga cggc
//
LOCUS       DATCUD010000679         1927 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_91854, whole genome shotgun sequence.
ACCESSION   DATCUD010000679 DATCUD010000000
VERSION     DATCUD010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91854"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VIQ99_09885"
     CDS             <1..397
                     /locus_tag="VIQ99_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011767385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HEY9183499.1"
                     /translation="NFDEDYPFAFNRKEPKDHGEGGSIIGAPLAGRVLILDDVITAGT
                     AVREVLDLVRGAGATPAGVLVALDREEVAPKERISAVQKLEQELQVPIRSIVTLTDLI
                     DHLEEDKEYEQYLPAVRAYRNRYGVPRED"
     gene            517..1167
                     /locus_tag="VIQ99_09890"
     CDS             517..1167
                     /locus_tag="VIQ99_09890"
                     /inference="COORDINATES: protein motif:HMM:NF024901.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEY9183500.1"
                     /translation="MFLRTGAVVLLIAAFVLPSDSSAQSRNESRKLYSWKDEHGNVHY
                     SETIPPEYADRDREILNEHGVRVGTEEGEITPEERAEQERLAAIAEAERRARLEVARH
                     DRMLLETYITVADIEDLRDRRLELLEAQIKVTEAYLGNLRKRLLTLQDEASEFKPYTT
                     KPDAPQIPPNIALELSRTLDLINTYERTLSRTRGDQEALRESFDKDIARFRELKGV"
     gene            complement(1171..1638)
                     /gene="dut"
                     /locus_tag="VIQ99_09895"
     CDS             complement(1171..1638)
                     /gene="dut"
                     /locus_tag="VIQ99_09895"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY9183501.1"
                     /translation="MTNTARRVELKILNPRVGKDLPLPKRATAGSAGLDLRACLDAPL
                     DLAPGETKLIPTGLAIHLADPKLAAVIIPRSGLGHKHGIVLGNLVGLIDSDYQGELMI
                     SCWNRGTQPFRIEPGERVAQLVVVPVVQVEFDVVESFATSDRGAGGFGHTGRA"
     gene            complement(1656..>1927)
                     /locus_tag="VIQ99_09900"
     CDS             complement(1656..>1927)
                     /locus_tag="VIQ99_09900"
                     /inference="COORDINATES: protein motif:HMM:NF016051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphopantothenoylcysteine decarboxylase"
                     /protein_id="HEY9183502.1"
                     /translation="FAAETNDLAKHAREKLERKRVDMIAANQVGPDCGFDRETNTLTV
                     FWSGGGELALGEGSKPLLARRLVELVAERYRAARAAASPTSSLAR"
BASE COUNT          392 a          618 c          623 g          294 t
ORIGIN      
        1 caacttcgac gaggactatc cgttcgcgtt caatcgcaag gagccgaagg accatggcga
       61 gggtggctcc atcatcggcg caccgctcgc gggacgcgtg ctgatcctcg atgacgtgat
      121 cacggccggc accgccgtgc gcgaggtgct cgacctcgtc cgtggcgcgg gcgcgacacc
      181 ggccggcgtg ctcgtcgcgc tggatcgcga ggaggtcgcg ccgaaggagc gcatctcggc
      241 cgtgcagaag ctcgagcagg agcttcaagt cccgattagg agtatcgtca cgctgacgga
      301 tctgatcgac cacctcgagg aagacaaaga atacgagcag taccttcccg cagtacgcgc
      361 ttaccggaac cgatacggcg tgccgcgaga agactaggca gatcggctct tccacgagat
      421 tgagagctac ttggcagaaa atgaagctcg accggctcgc agacgcgaaa atttggtata
      481 tctagcgagt cgcaacggcc acaaggttta cataacttgt tcttacggac cggcgcagtc
      541 gtgctcctga tcgcggcctt cgtgctgccg tcggacagta gcgcccagag ccggaacgaa
      601 agccgcaagc tgtacagctg gaaggacgag cacggtaacg tccattacag cgaaaccatc
      661 ccgcccgagt acgcggaccg agaccgcgag atcctgaacg agcacggcgt gcgcgtcggc
      721 accgaggaag gcgagatcac gccggaagag cgtgccgagc aagaacgcct cgcggccatc
      781 gcggaagccg agcgcagagc caggctcgag gtcgcgcgtc acgaccggat gctgctcgag
      841 acgtatatca ccgtagcgga catcgaggat ctgcgcgatc ggcgcctcga gctgctcgaa
      901 gcgcaaatca aggtcaccga ggcgtacttg ggcaacctaa ggaagcgtct gctcacgctg
      961 caggacgagg ccagcgagtt caagccgtac acgacgaagc cggatgcgcc gcagatcccc
     1021 ccgaacatcg cgctcgagtt gtcgcgcacg ctcgatttga tcaacaccta cgagcggacg
     1081 ttgtcgcgca cgcgcggcga ccaagaagca ctgcgcgaat cgttcgacaa ggacatcgct
     1141 cgcttccgcg agctcaaagg cgtctgaggc tcaagcccgg cccgtgtggc cgaagccacc
     1201 ggcgccgcgg tcgctggtcg cgaagctctc gacgacgtcg aactctacct gcactaccgg
     1261 tacgacgacg agctgtgcga cgcgttcgcc gggctcgatc cgaaacggct gcgtgccccg
     1321 gttccagcaa gagatcatga gctcgccctg atagtcggag tcgatgagcc cgaccaggtt
     1381 gccgagcacg atgccgtgct tgtgaccgag ccccgaacgc ggaatgatca cggcagcgag
     1441 cttgggatcc gcgaggtgta tcgcgagacc cgtcggaatc agcttggtct cgccgggcgc
     1501 gagatcgagc ggcgcatcca agcacgcccg aagatccagc cccgcggagc ctgcggtcgc
     1561 gcgcttcggc agaggcaaat ccttgccgac acgcgggttc aagatcttga gctcgacacg
     1621 ccgggcagtg ttcgtcacaa aagggccttg tcgttctagc gggcgagcga ggacgtgggc
     1681 gacgccgcgg cacgagccgc gcgatagcgt tccgcgacca gctcgacgag gcgccgcgcg
     1741 agcaacggtt tgctgccctc gccgagcgcg agctcgccac cacccgacca aaaaaccgtg
     1801 agcgtgttcg tctcgcggtc gaagccgcag tcggggccga cctggttcgc cgcaatcatg
     1861 tcgacgcgct tccgctcgag cttctcgcgc gcatgcttgg ccaaatcgtt ggtctcggcc
     1921 gcgaagc
//
LOCUS       DATCUD010000680         3876 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_13404, whole genome shotgun sequence.
ACCESSION   DATCUD010000680 DATCUD010000000
VERSION     DATCUD010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13404"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VIQ99_09905"
     CDS             <1..373
                     /locus_tag="VIQ99_09905"
                     /inference="COORDINATES: protein motif:HMM:NF017870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HEY9183503.1"
                     /translation="DGEPFEGRVQVSADPARLPPAGTIDLTNPLFVIGLVDTTAEVRL
                     SKALAQNLATLVARLQLADDGSVPADELEYLAEAQAGLTLTLLVGQGVLVEDGDAYRS
                     VVDFSNGALTLNGNAMPFGLQ"
     gene            complement(376..903)
                     /locus_tag="VIQ99_09910"
     CDS             complement(376..903)
                     /locus_tag="VIQ99_09910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183504.1"
                     /translation="MIRASFARFSIGALPLLFASVGAFAQDEDDKPFDRTPVDCVRVT
                     SIDKTEAVDDQNILFHMRGDAVYRNHLPQRCPRLEQEDRIAYRVFGGRLCSSDTITVV
                     EQGVFGLQPGFTCGLGDFVPLSPEEVEDLRAQEDDLPAGVDAIQAEAVDLEKNGEPAA
                     DPEPGERSDAPAADE"
     gene            1094..1822
                     /locus_tag="VIQ99_09915"
     CDS             1094..1822
                     /locus_tag="VIQ99_09915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183505.1"
                     /translation="MAPTIKTAAAAAKLPPTDDSPSEHIYIGGDDFTADPATIAKTVK
                     NKVRLNNPLRHMCAEITFFAEGVLKVATLRNGKQIESFFLDLRFLDPVPKIERTIATR
                     WLYAALGCGATAALAAFLLRFDALYIAAAGALGLAALGSAVALYVGIYLSHERIEFFT
                     MHGRASVLPLVANFGTLRKFHAFLPVLSRAIEEAAESIGADTSAYLRAEMREHYRLRG
                     QDVLSPESCAAGTGRILAQFDVQL"
     gene            1866..2918
                     /locus_tag="VIQ99_09920"
     CDS             1866..2918
                     /locus_tag="VIQ99_09920"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013775.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside phosphotransferase family
                     protein"
                     /protein_id="HEY9183506.1"
                     /translation="MSAQQDLSPPDAVLEAYELIRESLARASSGLINPTWFVRSRRGA
                     GLVLQRVSPLFTAEVNMDIAAVTEHLARKGILTPRLVPTRAGELWLEHDGVLWRVLTR
                     IEGVCRDALESPAQARAAGRVVAEFHRAVSDLDYSFRHRRPGVHDTPRHLRTLREALV
                     EHRAHRHFDAIAPLAERVLGAAATLPPLPKTAERIVHGDPKISNLIFAPDSDRALCLV
                     DLDTVSRMEVALELGDALRSWCNPAHEDAASARFDQPLFDAAVAGYADAAEGFLTRDE
                     WSAIPCGTLTIAVELASRFCTDALRESYFGWNRARYESSSAHNQARTLGMLTLAASIR
                     AALPALEDSTAAAFGA"
     gene            3006..>3876
                     /locus_tag="VIQ99_09925"
     CDS             3006..>3876
                     /locus_tag="VIQ99_09925"
                     /inference="COORDINATES: protein motif:HMM:NF017051.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY9183507.1"
                     /translation="MLEHLGLVGVSWRQGGSESLAEFALHQDRAADLLADFARRLKLS
                     ELAYLATCNRVEILFARSEHTPVTDLRRDAFKLLTGRAAADGEAERRLRAWAGEGAAE
                     HLFLTAAGLDSACVGETEIVGQVRYSQERALELGLCGPSLGLVFEEALKIAGRVRGGT
                     KLAEGRVSLAEIAVQRLRERIARTPGRIALIGVSPMTERAAVSLAQAGLDFTVVNRSA
                     DKAAALAARHGAGHSSLDAFRRDPPAVEALLTATGAGEPILTEATLERLAARTASGQP
                     PLIVDMAVPGDVDA"
BASE COUNT          607 a         1348 c         1283 g          638 t
ORIGIN      
        1 cgacggagaa ccgttcgagg gccgcgtgca agtatccgcg gatcccgcgc ggctgccgcc
       61 ggccggtacg atcgatctca cgaacccgct gttcgtgatc ggtctggtcg acaccaccgc
      121 cgaggtcagg ctgtcgaagg ctctggcaca gaacctggcc acgctcgtgg cgcgcctgca
      181 gctcgccgac gacggctcgg tgccagccga cgagctcgaa tatctggccg aggcccaggc
      241 gggcctgacg ctgacgttgc tggtcggtca aggcgtgctg gtcgaggacg gcgacgccta
      301 ccgcagcgtc gtcgatttct cgaacggcgc gctgacgctg aacggcaatg cgatgccgtt
      361 cggcctacag tagcctcatt cgtctgccgc cggagcgtcg gaacgctcgc ccggctccgg
      421 gtccgcggcc ggctcgccgt tcttctcgag atcgaccgcc tcggcctgaa tcgcatctac
      481 gccggccggt aggtcgtcct cttgagctcg aaggtcctcg acctcctcgg gcgacagcgg
      541 cacgaagtcg ccgaggccac aggtgaagcc cggctgcaag ccaaatacgc cctgctcgac
      601 caccgtgatc gtgtcgctgc tgcacagccg gccgccaaac acgcggtacg caatacggtc
      661 ttcctgctcg agacgcgggc accgctgcgg caggtggttc cgataaaccg catcaccgcg
      721 catatggaac agaatgttct ggtcgtcgac ggcctcggtc ttatcgatcg acgtcacgcg
      781 gacgcagtcc acaggggtgc ggtcgaacgg tttatcgtcc tcgtcctggg cgaatgcacc
      841 cacggacgcg aacagcagcg gcagcgcgcc gatcgagaac cgagcaaacg aagcgcgaat
      901 catggtgcac ctccgatgat cgcgtgttga gaccctttat aacgtaagca cgcccgaccg
      961 gaaaccctgc gcaccgatcg tgagcacagc ccaagtgtga acgtgctcac ggccgctccg
     1021 cggcccagtc tttagagtgc tgatccatag ccccttcgat cccgggccgg gacaggttgt
     1081 tccgttaggc accatggctc cgaccatcaa aaccgcagcc gccgccgcaa agctgccgcc
     1141 caccgacgac tcgccgtccg agcacatcta tatcggcggc gacgacttca cggctgaccc
     1201 cgccacgatc gcgaagaccg tcaagaacaa ggtcaggctc aataatcctc tgcgccacat
     1261 gtgcgccgag atcacgttct tcgcagaggg cgtgctcaag gtcgcgacgt tgcgcaatgg
     1321 caagcagatc gagtcgttct tcctggactt gcgcttcctc gatcccgtgc cgaagatcga
     1381 gcggacgatc gccactcgct ggctgtacgc ggcgctgggc tgcggcgcaa cggcggcttt
     1441 ggcggccttt cttctgcggt tcgacgcgct gtatatcgcg gcagccggcg cgctcggcct
     1501 ggccgccctc ggaagcgcgg tagcgctcta cgtcggcatc tacctgagtc acgagcgaat
     1561 cgaattcttc acgatgcacg gccgcgcctc ggtgctgccg ctcgtcgcga acttcggcac
     1621 gttacgcaag tttcacgcgt tcctgcccgt tctgagccgg gccatcgaag aggcggccga
     1681 gagcatcggc gccgacacgt ctgcgtatct gcgagccgag atgcgcgagc attaccggct
     1741 gcgcggccag gacgtcctga gcccggagag ctgcgccgcc ggcaccgggc gcatcctcgc
     1801 gcagttcgac gtccagctct gaggcctccc ggcgccgagc cggcttccgg ctatcatggc
     1861 gccccatgtc agctcagcag gaccttagcc ctcccgacgc ggtgctcgaa gcctacgagc
     1921 tgatccgcga gtcgctggcc cgcgcttcgt ccggactcat caatccgacg tggttcgtgc
     1981 gatcgcgccg cggggcgggc ctcgtgctgc aacgcgtgag cccgctgttc acggccgagg
     2041 tcaacatgga catcgccgcc gtgaccgaac acctcgcgcg caaaggcatc ctcacgccgc
     2101 gtctcgtgcc gacgcgtgcc ggtgagctct ggctcgagca cgacggcgtg ctgtggcgcg
     2161 tgctcactcg catcgaaggc gtgtgccgcg atgcgctcga atcaccggcg caggcgcgcg
     2221 cagccggacg cgtcgtcgcg gagtttcatc gcgctgtcag cgacctcgac tattcgtttc
     2281 ggcaccgccg ccccggagtc cacgacacgc cgcggcactt gcgcacgctg cgcgaggccc
     2341 tcgtcgagca ccgcgcgcat aggcatttcg acgcgatcgc gccgctggcc gagcgcgtgc
     2401 tcggggccgc ggcgacgctg ccgccgctgc cgaagaccgc cgagcgcatc gtgcacggcg
     2461 atcccaagat ctcgaatctg atctttgcgc ccgattccga tcgtgcgctg tgcttggtcg
     2521 acctcgatac cgtttcgagg atggaggttg cgctcgagct cggcgacgcg ctgcgctcgt
     2581 ggtgcaatcc ggcacacgag gatgccgcca gcgcgcggtt cgaccagccg ctattcgacg
     2641 ccgcggttgc gggatatgcg gatgccgccg agggcttcct gacccgcgac gaatggagcg
     2701 cgatcccgtg cggaacgttg accatcgccg tcgagctcgc ctcgcgcttt tgcaccgatg
     2761 cgctgcgcga aagttacttc ggctggaacc gggcgcgcta tgaaagctcg agcgcccaca
     2821 accaggcccg caccctcggc atgctcacgc tggccgccag cattcgtgcc gcgctgcccg
     2881 cgctcgagga ttcgacggcc gcggcattcg gcgcataaga gaatcgttcg caactgcgac
     2941 tcgtcacacc gggccgtgac acggctgtga cacaggcgcg cgcgaacgag ggctaggctg
     3001 ctcgcatgct cgagcacttg ggtctggttg gcgtctcctg gcgccagggc ggcagtgagt
     3061 cgctcgccga gttcgcgctg catcaggacc gagccgccga cttgctcgcg gacttcgcgc
     3121 gacgcttgaa gctgtcggag ctcgcctatc tcgcgacgtg caatcgtgtg gagatcctgt
     3181 tcgcgcgcag cgagcacaca cccgtcacgg atctgcggcg cgacgctttc aagctgttga
     3241 ccggccgcgc cgcggccgac ggggaggcgg agcgacggtt gcgcgcctgg gccggcgaag
     3301 gcgcggccga gcatctgttt ctgacggccg cgggcctcga ctcggcctgc gtgggcgaga
     3361 ccgagatcgt gggccaagtc cgctattccc aagagcgtgc gctcgagctc ggcctgtgcg
     3421 ggccgagctt gggtctggtg ttcgaggagg cgctcaagat cgcgggacgc gtgcgcggcg
     3481 gcacgaagct cgcggagggc cgggtgtcgc tggccgagat cgcggtacaa cgccttcgcg
     3541 aacgtatcgc acgcacaccg ggccggatcg cgctgatcgg cgtctcgccg atgacggagc
     3601 gcgccgccgt gtcgctcgca caagcggggc tcgatttcac tgtcgtgaac cgcagcgccg
     3661 acaaggccgc cgcgctcgcg gcgcgtcacg gcgcggggca ctcgagtctc gacgcgttcc
     3721 ggcgtgaccc gccggccgtc gaggcactgc tgactgcgac cggcgccggt gagccgatct
     3781 tgaccgaggc gaccctcgag cggctcgccg cgcgcaccgc gtccggccag ccgccgttga
     3841 tcgtcgacat ggcggtgccc ggagacgtcg acgccg
//
LOCUS       DATCUD010000681         2824 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_34950, whole genome shotgun sequence.
ACCESSION   DATCUD010000681 DATCUD010000000
VERSION     DATCUD010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2824)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2824)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2824
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34950"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1165)
                     /gene="mnmE"
                     /locus_tag="VIQ99_09930"
     CDS             complement(<1..1165)
                     /gene="mnmE"
                     /locus_tag="VIQ99_09930"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF003661.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEY9183508.1"
                     /translation="MAPRNDDTIAALATAPGVAAIAVVRISGPKARVIGSALGGLEPR
                     ARYAELCTFRDSGGQAIDRGLLLLFPGPRSFTGEDVVELHGHGGRAVADALLAAAYAQ
                     GARPAEPGEFTLRAFLNDKLDLLQAEAVADLIAAGSTRAARAALRSLDGEFSAAVGAL
                     QRALTALRVRIEAWLDFPDEELPFDAAPECAAEIDALLASLDALTTHARSGRALRDGL
                     TIAIAGAPNAGKSSLLNRLAGYDAAIVTAIPGTTRDTLREHLTLEGLPVTIVDTAGLR
                     ETSDPIEREGVRRAHAEVARADRVLWVADAREPLAAAVATARAVLGGNEGLTLVANKI
                     DLVDDRPRLVVEEGVPVAYVSALTGAGMDLLVAHLKELAGLGVESAGTFSARRR"
     gene            complement(1187..>2824)
                     /gene="yidC"
                     /locus_tag="VIQ99_09935"
     CDS             complement(1187..>2824)
                     /gene="yidC"
                     /locus_tag="VIQ99_09935"
                     /inference="COORDINATES: protein motif:HMM:NF002352.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY9183509.1"
                     /translation="WLTLLGMAWLTYNAWQADYGAVADRSSAPATTNAPAATPGGSLP
                     SLTPVDNPISTQQSPAPTTTPTVTGELIRVRTDVLDVLIASNGGDLVRADLLQYPVQK
                     NVPEPVVRLLDDSANERWVFQSGFRSAVGGAEPNHLGTFRTPNNDYTLAPGQNELVVT
                     LDWVGEGPISARKTYTFRRGHYQVDLTLTVTANGANAWRGAPYVQMERVHVPVERSYT
                     SVDSYSFKGPVLYDADGFERFEFEDLAEAPVTRNVEGGWFAAIQHHFLAAAVPPATGV
                     YRYDAAVRGSAFQLSAIGPVADVNAAMPLNSTFKLFVGPKLQEQLQDVGSDLERTVDY
                     GITTPLAQPLFSVLNWVHGWVNNWGFAIIIVTIMIKAVFYKLTAMSGRSMAKMRKIAP
                     RMKALQERYKDDRQALSQAMMELYKREKVNPAAGCLPILIQMPFFFAFYWMLVESVEL
                     RQAPFALWLDDLSAADPFYVLPALMAAAMWFQTRLSPAPPDPIQAKMMQIMPLVFAGL
                     LVFFPAGLVLYQLTNTVLSIAQQWRINTLVARESATT"
BASE COUNT          472 a          979 c          919 g          454 t
ORIGIN      
        1 ggcggcgacg cgcgctgaac gtgccggcgc tctcgacccc gagtcccgcc agctccttca
       61 gatgcgcaac cagaagatcc atgcccgcgc ccgtcagcgc ggatacgtat gcgaccggca
      121 caccctcctc gaccacgagc cgcggccggt cgtcgacgag gtcgatcttg ttcgcgacga
      181 gcgtgagccc ctcgttcccg ccgagcacgg ctcgcgcggt tgcgaccgct gctgcgagcg
      241 gctcacgcgc gtccgcgacc catagcacgc gatcggcgcg cgcaacctcg gcgtgcgcgc
      301 gccgcacgcc ttcccgctct atgggatcgc tggtctcccg caggcccgcc gtgtccacga
      361 tcgtgacggg cagcccttcg agcgtcaggt gctccctgag cgtatcgcga gtcgtgccgg
      421 ggattgccgt cacgatcgcc gcgtcgtagc cggccaagcg gttcaacagg ctcgacttgc
      481 ccgcgttcgg cgcgccggcg atcgcgatag tcaagccgtc gcgcagcgcg cggcccgacc
      541 gcgcgtgcgt agtcagcgca tcgaggctcg cgagcaatgc gtcgatttcc gccgcgcact
      601 cgggagccgc atcgaacggt agctcctcgt ccggaaaatc cagccacgct tcgatccgca
      661 ctcgcagagc cgtcaaggcc cgttgcagcg caccgactgc cgccgagaat tcgccatcga
      721 gcgagcgcag cgccgcccgc gccgctcgcg tcgaaccggc cgcgatcagg tcggcgacgg
      781 cctccgcttg gagcaaatcg agcttgtcgt tcaagaacgc gcgcagagtg aactcgccgg
      841 gctccgcggg ccgggcgccc tgcgcatacg cggccgcgag cagcgcatcg gccacggcgc
      901 gaccaccgtg cccgtgcagc tcgacgacgt cttcgccggt aaaagaccgc gggccgggga
      961 acaagagcag caggccgcga tcgatcgcct ggccacccga gtcgcgaaac gtgcagagct
     1021 cggcgtagcg ggcgcgcggc tcgagtccgc cgagcgcgga acctatcaca cgagctttcg
     1081 gcccagagat ccgcaccacg gcgatcgcgg cgaccccggg cgccgtcgcg agcgctgcga
     1141 tcgtgtcgtc attccgcggc gccactccgc tctacccttc cggttgtcag gtcgtggccg
     1201 actcgcgcgc gacgagtgtg ttgatgcgcc actgctgggc gatcgacaac acggtgttcg
     1261 tcaattgata caggacgagg cccgcgggga agaacacgag caagcccgcg aacacgagcg
     1321 gcatgatctg catcatcttc gcctggatcg gatcgggtgg cgccgggctc aggcgcgtct
     1381 ggaaccacat cgcggccgcc atcagcgccg gcaacacgta gaacggatcg gccgccgaca
     1441 gatcgtcgag ccacagtgcg aacggcgctt gccgcagctc tacgctttcg acgagcatcc
     1501 agtagaacgc gaagaagaac ggcatctgaa tcaggatcgg caggcagccc gcagccggat
     1561 tcaccttctc gcgcttgtag agctccatca tcgcctggct caacgcctgc cggtcgtctt
     1621 tgtagcgctc ctgcagcgct ttcatgcgcg gcgcgatctt gcgcatcttc gccatcgagc
     1681 ggccgctcat ggcggtgagc ttgtagaaca ccgccttgat catgatcgtg acgatgatga
     1741 tcgcgaagcc ccagttgttg acccagccgt gcacccagtt caagacggaa aacagcggct
     1801 gcgcgagcgg tgtcgtgatg ccgtagtcga ccgtgcgctc gaggtcgctg ccgacgtcct
     1861 gtagctgctc ttggagcttc ggtccgacga acaatttgaa cgtcgagttc aacggcatcg
     1921 cagcgttcac atcggccacc ggcccgatcg cgctgagctg gaacgcagag ccgcgaaccg
     1981 cggcgtcgta acggtagacg ccggtcgccg gcggcaccgc ggcggcgagg aagtgatgct
     2041 gaatcgctgc gaaccaaccg ccttcgacgt tgcgcgtgac gggtgcctcc gcgagatcct
     2101 cgaactcgaa acgctcgaag ccatcggcgt cgtaaagcac gggccctttg aacgaatagg
     2161 aatcgacgga cgtgtacgac cgttcgacgg gtacgtgaac gcgctccatc tgcacgtacg
     2221 gcgcgccgcg ccaagcgttg gcaccgttag cggtgacggt caacgtgaga tcgacttggt
     2281 agtgcccgcg ccgaaacgtg taggtcttcc gcgcgctgat cggcccctcg cctacccagt
     2341 cgagcgtcac gacgagctcg ttctgccccg gcgccaacgt gtagtcgttg ttcggcgtgc
     2401 ggaacgtgcc caagtggttc ggctccgcgc cgccgaccgc gctccggaac ccgctctgga
     2461 acacccagcg ttcgttcgcg ctatcgtcga gcagccgcac gaccggctcg ggtacgttct
     2521 tttggaccgg gtattgcagc aggtccgcgc gcacgaggtc gccgccgttc gacgcaatca
     2581 atacgtcgag cacgtcggtc cggactcgaa tcagctcgcc ggtgacggtc ggtgtcgtgg
     2641 tcggtgccgg cgactgctgc gtcgagatcg ggttatcgac cggcgtcaaa ctcggcaggc
     2701 ttccgcccgg agtggcggcc ggcgcattcg tcgtcgctgg cgccgagctt cgatccgcaa
     2761 cggcgccata atccgcctgc cacgcgttgt acgtgagcca ggccatgccg agcagggtga
     2821 gcca
//
LOCUS       DATCUD010000682         1595 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49195, whole genome shotgun sequence.
ACCESSION   DATCUD010000682 DATCUD010000000
VERSION     DATCUD010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49195"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VIQ99_09940"
     CDS             complement(<1..424)
                     /locus_tag="VIQ99_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183510.1"
                     /translation="MIRTRTLLPLAAVVAQLAAPAFAQNQAATLPELLDQVRNVRADE
                     NALFQQRRAEYEGTAEAQKAALLQRAEQTRATLDAASQRLADTYSNNEVRINNLNQQL
                     RDKATALGLAELFGLARQVANDSSSILQQSLITTQFPPA"
     gene            complement(421..1149)
                     /locus_tag="VIQ99_09945"
     CDS             complement(421..1149)
                     /locus_tag="VIQ99_09945"
                     /inference="COORDINATES: protein motif:HMM:NF023358.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3450 domain-containing protein"
                     /protein_id="HEY9183511.1"
                     /translation="MPAALAAPAGAQLQEALTAQVQADREAAASQERINEIRERTQDA
                     AGRYAQAMADVDSLDRYNNQLQEQVRSQEEEIASIERQLNDIDTTNREVQPLMQQMVD
                     TLSRFVELDVPFLLEERTARVQELKDIMPRADITISEKYRLILEAYQIELEYGRTLEA
                     YEGRLGAGADARTVEFARLGRVSLMYRTLDGSETGYWDANQKTWVVDDSYREAVEEAI
                     RVAKRDGAPDLLTVPVPAPQEVRS"
BASE COUNT          282 a          533 c          477 g          303 t
ORIGIN      
        1 cggccggcgg gaactgcgtc gtgatcaacg actgctgcaa gatcgacgag ctgtcgttcg
       61 cgacttgacg cgccaaaccg aacagctcgg ccaagccgag cgcggtcgcc ttgtcgcgca
      121 attgctggtt cagattattg atgcggacct cgttgttcga gtacgtatcc gcgaggcgtt
      181 gcgacgcggc atcgagcgtg gccctggtct gctctgcgcg ctgcagcaac gccgcttttt
      241 gcgcctcggc cgtgccctcg tactccgcgc gccgctgctg gaacagcgcg ttctcgtcgg
      301 cccggacatt ccggacctga tcgagcaact ccggcagcgt ggcagcctgg ttctgtgcga
      361 acgccggggc ggcgagctga gcgacgactg ccgcgagcgg cagcaatgtt cttgttctaa
      421 tcacgaccgc acctcctgcg gcgctgggac aggcacggtc aacaaatccg gggcaccgtc
      481 gcgcttcgcg acacggatgg cctcttcgac ggcctccctg tagctgtcgt cgacgaccca
      541 agtcttctgg ttcgcgtccc agtagcccgt ctcggagcca tcgagcgtgc gatacatcaa
      601 tgacacgcgg cccaagcgcg cgaattcgac ggtacgagca tcggcaccgg cgccgaggcg
      661 gccttcgtag gcttcgagcg tgcgcccgta ctcgagctcg atctggtacg cctcgagaat
      721 caggcgatac ttttccgaga tcgtgatgtc ggcgcggggc atgatgtcct tgagttcctg
      781 cacgcgagcc gtgcgctctt cgagcaggaa cggcacgtcg agctcgacga accgcgacag
      841 cgtgtcgacc atctgctgca tcagcggctg cacttcgcga ttcgtcgtat cgatgtcgtt
      901 gagctgacgc tcgatcgacg cgatctcttc ctcctgcgac cgcacctgct cttgcagctg
      961 gttgttgtag cggtcgaggc tgtcgacgtc ggccatcgcc tgagcgtaac ggccggcggc
     1021 gtcctgagtg cgctcgcgga tctcgttgat tctttcctgc gacgcggccg cctcgcgatc
     1081 ggcctgcact tgcgcggtca gagcctcttg cagctgcgcg ccggcaggtg cggcgagagc
     1141 ggctggcaag agcgccacca gcaggtggac ccagcgcggg ccagtagctc tagctacttt
     1201 ggttgtgaaa gggatcatga ctacaagcgc ctcctgaaaa tgacctgcac acgactcacg
     1261 ccagcatcac tggaaagagc catctcgttc gaccaaaccc aatgcaatta ggcagctccc
     1321 gactcaacga gtgccgcgcc ataaacccaa tgatccacca aggggtaacg gcccacaacc
     1381 gcaacctgcg gaccccggct acgatgaccg ttcgaagagt accgatgagc aaaatcaccg
     1441 tacacaagct tccccctgcc taaccggaag agatgtctat cccttcgccc gaatctcgcg
     1501 ggtctcggtc acggcaccca atctcattcg agttattcgc cccctgcgtc ccaagggtcc
     1561 ttggcgccgg ccggactcat ccgacccgtc cgccg
//
LOCUS       DATCUD010000683         3415 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56452, whole genome shotgun sequence.
ACCESSION   DATCUD010000683 DATCUD010000000
VERSION     DATCUD010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3415
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56452"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /locus_tag="VIQ99_09950"
     CDS             <1..956
                     /locus_tag="VIQ99_09950"
                     /inference="COORDINATES: protein motif:HMM:NF024765.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alginate export family protein"
                     /protein_id="HEY9183512.1"
                     /translation="DVGKRRLVARSGFRYAVASFAGADWDWRGANGMRVRAFYVIPMR
                     ILPATRAEMLDNDQELDRGARDASMLGAYYLSAPLPDRTQVELTALDLRAPDGTGEAP
                     GPLDLQTYAVRVFRPVARSGWNYEIEGGTQRGVSASTAGIALDHEAYYAHAEIGYSFD
                     VPWVPNLLLQYDRASGDADPTDTRTERFNPLFGERRFDFNPTSIYGIFARSNIESVGI
                     RLESAWTRRWRNMVSYRDFRLASARDAWVGSGWRDPSGTAGRSLGQQIEASFTFVAIP
                     DRLSVETGFALVDSGRFPQQTAGTAFLGSPRYFYAAVTTNF"
     gene            978..1754
                     /gene="modA"
                     /locus_tag="VIQ99_09955"
     CDS             978..1754
                     /gene="modA"
                     /locus_tag="VIQ99_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY9183513.1"
                     /translation="MRRIAASLIGVALMLVGIPALPLKAETATVAVAANFFAPLEQLQ
                     TMFEEETGHELVLTSGSTGQLYAQIVNGAPFDVFLSADSEHPTRLVAEGLGDPSTQHT
                     YAIGKLALWTHDPEKFDPLDLTTLKRTDFRWLAVANPELAPYGIAAEQTLKALSLWEP
                     LQPRLVRGQSIAQTFAMAEIGNAELALVALSQALVYQGVARYFEVPAELYEPLRQDAV
                     LLNRAGDNGAARAFVAWLRGPRAGEIIAGFGYGTAPVASR"
     gene            1807..>3415
                     /locus_tag="VIQ99_09960"
     CDS             1807..>3415
                     /locus_tag="VIQ99_09960"
                     /inference="COORDINATES: protein motif:HMM:NF021942.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0070009 - serine-type aminopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S46 family peptidase"
                     /protein_id="HEY9183514.1"
                     /translation="MFHRIGFSLGVSCLLAGPGVAAADEGMWTFDNFPTALVEQRYDV
                     EIDQPWLDRVRRGVVRLAGCTASFVSPDGLMLTNHHCVASCLAQNSTRESSLLDTGFV
                     ADGRQRELRCPVQIADVLEELTNVTDKVADALRGLDARAANERRRQTLTALELECEEA
                     AKRSGTPRKCEAVTLYGGGQYWLYQYRRYDDVRLVFAPESDIAAFGGDPDNFQFPRWC
                     LDFALLRAYVEGKPAATPEHLSIDFAGPDAGQPVFVVGHPGSTDRQLTVAELKTLRDR
                     ILPPGLLRASELRGRYIQFGKTGDEAQRIVQDSLDGLENNIKVQRKQLDALLDDAQMV
                     AKHDAEADLRLRLARNPALAAEIGDPWARIEAAQAAEAARWLPYQFIEGGTGFNSRLF
                     RAARQLVRAAVERGKPNAERLREYTDGFLPRLEQQVVAPVPIYPELEQLTLSFSLERM
                     REWLGPDDAVVRRLLAAESPDEVAARLIAGSKLADPQVRTQLWTGGQAAIDASTDPFI
                     ELAKSLDTEARALRKWHEDEIEAVVEVA"
BASE COUNT          527 a         1167 c         1155 g          566 t
ORIGIN      
        1 tcgatgtcgg taagcgtcgg ttggtcgcgc gcagtggttt ccgctacgcc gtcgcgtcgt
       61 tcgcgggcgc cgactgggac tggcgcggcg cgaacggcat gcgtgtgcgc gcgttctacg
      121 tcataccgat gcggatcctg cccgcgacgc gcgccgagat gctcgacaac gatcaggagc
      181 tcgatcgcgg cgcgcgcgac gcgtcgatgc tcggcgccta ctacctctcg gcgccgttgc
      241 cggaccgaac gcaggtcgag ctcacggccc tcgatctcag ggcgccggac gggaccggcg
      301 aggcgccggg tccgctcgac ctgcaaacct acgccgtgcg ggttttcagg ccggtcgcgc
      361 gcagcggctg gaactacgag atcgagggcg gcacacagcg cggcgtctcg gcttccacgg
      421 ccggcatcgc actcgaccac gaggcttact acgcgcacgc cgagatcggt tattcgttcg
      481 acgtgccctg ggtaccgaac ctgctactcc aatacgatcg cgcgagcggc gatgcggatc
      541 ctacggacac gcgcaccgaa cggttcaatc cgttgttcgg cgagcgccgc ttcgatttca
      601 atcccacgag catctacggg atctttgcgc gcagcaacat cgagagcgtg ggcatccgtc
      661 tcgagtctgc ctggacacgg cgctggcgaa acatggtttc gtatcgcgac tttcgcctcg
      721 cctcggcccg cgacgcatgg gtcggctccg gttggcgcga cccatccggc acggcggggc
      781 gctcgctcgg ccaacagatc gaagcgtcgt tcacgttcgt ggctatcccg gatcggctca
      841 gcgtggagac cggtttcgcg ctcgtggatt cggggcgatt tccgcagcag acggccggca
      901 ctgcgttcct aggctcaccg cgctatttct atgcggccgt gaccacgaac ttctgacttg
      961 gctggtagag taggcccatg aggcgaatcg ctgcgtccct gatcggcgtc gcgctgatgc
     1021 tggtcggcat acctgcgctg ccgctcaagg ccgagacggc taccgttgca gttgcggcga
     1081 atttcttcgc gccgctcgag cagcttcaga ctatgttcga ggaggagacc gggcacgagc
     1141 tggtgctgac ctcgggctcc acgggccagc tgtacgcgca gatcgtgaac ggcgcgccgt
     1201 tcgacgtgtt cctctcggcc gactcggagc acccgacgcg gctcgtggcc gaaggtctcg
     1261 gcgacccgtc gacccagcac acgtacgcga tcggcaagct cgcgctgtgg acgcacgatc
     1321 ccgagaagtt cgacccgctg gaccttacga cgctgaaacg cacggatttc cgctggctcg
     1381 ccgtcgcgaa ccccgagctc gcaccttacg gcatcgcggc cgagcagacg ctgaaagcct
     1441 tgagcctttg ggagccgctt cagccgcggc tcgtgcgcgg tcagagcatc gcgcagacgt
     1501 tcgcgatggc cgagatcggc aacgcagagc tcgcgctcgt ggcgctgtct caagcactgg
     1561 tttatcaagg tgttgcacga tatttcgaag tcccggcgga gctgtatgag ccgttgcgcc
     1621 aggacgccgt gttgctgaac cgcgccggcg acaacggcgc ggcccgcgca ttcgtggcct
     1681 ggctgcgcgg cccgcgggcg ggcgagatca tcgcgggctt cggctacggc accgcccccg
     1741 tcgcgtcccg ctgagccgcg ccgggcggca taatcctcac gtctgtccgt tcgcgaggtc
     1801 cgacgcgtgt tccaccgaat cgggttcagt cttggggtgt cgtgcctgct cgccggcccc
     1861 ggagtcgccg cggccgacga aggcatgtgg acgttcgaca atttcccgac cgcgctcgtc
     1921 gagcagcgct acgacgtcga gatcgaccag ccgtggctcg atcgcgtgcg gcgcggcgtc
     1981 gtgcgcctcg caggttgcac ggcgtcgttc gtgtcgccgg acgggctgat gctcacgaac
     2041 caccactgcg tcgcgagctg cctcgcacag aactcgacgc gcgaatcgag cttgctcgac
     2101 acgggcttcg tcgccgatgg acggcaacgc gagctgcgct gccccgtgca gatcgcggac
     2161 gtgctcgagg agctcacgaa cgtcacggac aaggtcgccg acgcgctgcg cggcctcgac
     2221 gcgcgcgcgg ccaacgagcg tcgccgccag actctgacgg cgctcgagct cgagtgcgag
     2281 gaagccgcga aacggtccgg caccccgcgc aagtgcgagg ccgtgacgct gtacggcggc
     2341 ggccagtact ggctatacca atatcgccgt tacgacgacg tgcggctcgt gttcgcgccg
     2401 gagtccgaca tcgcggcctt cggcggcgac cccgacaact tccaattccc gcgctggtgc
     2461 ctggattttg cgctgctgcg cgcgtacgtc gagggcaaac cggccgcgac gcccgagcac
     2521 ttgtccatcg acttcgccgg tcctgacgcc ggtcaacccg tgttcgtggt cggccacccc
     2581 ggctcgacgg accgccagct cacggtcgcc gagctgaaga cgctgcgcga ccgaatcctg
     2641 cctccgggct tgctgcgcgc atcggagctg cgcggccgct acatccagtt cggcaagact
     2701 ggcgacgagg cgcaacggat cgtgcaggac tctctcgacg gtctcgagaa caacatcaag
     2761 gtccagcgca agcagctcga cgcgctgctc gacgacgcgc agatggtcgc gaagcacgac
     2821 gccgaagccg acttgcgtct gcggctcgcg cggaacccgg cgctcgcggc cgagatcggc
     2881 gatccctggg cacggatcga ggcggctcag gctgcggagg ccgcgcgttg gcttccgtac
     2941 cagttcatcg agggcggcac cggtttcaac agccggttgt tccgcgccgc gcggcagctc
     3001 gtgcgtgcgg cggtcgagcg cgggaaaccg aacgcggaac gcctgcgcga atacacggac
     3061 gggttcctgc cgcgcctgga acagcaggtc gtggcgccgg tgccgatcta ccccgagctc
     3121 gagcagctga cgctgtcgtt ctcgctcgag cgcatgcgcg agtggctcgg tcccgacgat
     3181 gccgtcgtcc ggcgcctgct cgccgccgaa tcgccggacg aggtggccgc gcgcctaatc
     3241 gccgggtcga agctcgccga cccgcaggtt cgtacgcaac tttggaccgg cgggcaggcc
     3301 gcgatcgatg cgtcgaccga tccattcatc gagctcgcca agagtctcga taccgaggct
     3361 cgggcgctac gcaagtggca cgaggacgag atcgaggccg tcgtcgaggt cgcgc
//
LOCUS       DATCUD010000684         3035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42115, whole genome shotgun sequence.
ACCESSION   DATCUD010000684 DATCUD010000000
VERSION     DATCUD010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42115"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..209)
                     /locus_tag="VIQ99_09965"
     CDS             complement(<1..209)
                     /locus_tag="VIQ99_09965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183515.1"
                     /translation="MNDLRHALKQATRNPGLSIVVILMLAVGIGATTAVYSVFHEILV
                     RALPVPEPDRLVNLGAPGLKPGSTS"
     gene            complement(442..711)
                     /locus_tag="VIQ99_09970"
     CDS             complement(442..711)
                     /locus_tag="VIQ99_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006787048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEY9183516.1"
                     /translation="MARKITCVLLGPDSEGLDRQPYPGELGKRIYENVSKLAWQRWLK
                     HQTMLINEYRLTTIEPKARKFLEDEMQKFFFGEGSSAPPDFKPQQ"
     gene            complement(719..1768)
                     /gene="mutY"
                     /locus_tag="VIQ99_09975"
     CDS             complement(719..1768)
                     /gene="mutY"
                     /locus_tag="VIQ99_09975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009020494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEY9183517.1"
                     /translation="MTTFAPRLLAWFDAHGRHDLPWQQNRTPYSVWVSEIMLQQTQVT
                     TVIPYYLKFMQRFPTVSALASAPLDDVLTLWAGLGYYARARNLKRAADIAAERHAGRV
                     PETFDELHALPGIGRSTAGAILSQAFDQRWPILDGNVKRVLARYHAVEGWPGTASVAA
                     ELWRHAEAHTPYERVAAYTQAIMDLGATLCTRSRPACTVCPLAADCAAAKAGTQAQYP
                     APRPKRDRAQRSVAVLVVSAPDGRVLLERRPASGIWGGLYSLPELPAEESPRDWCERS
                     LGAQVAAERTLRVIEHAFTHFDLDLVPRLVTLAAEPTQIADRDDWLWCMPGKPLAVGV
                     PAPVAALLRDGLVPA"
     gene            complement(1803..>3035)
                     /locus_tag="VIQ99_09980"
     CDS             complement(1803..>3035)
                     /locus_tag="VIQ99_09980"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY9183518.1"
                     /translation="MAGSLSGRQLMSNLALNGAVEFREFSPRVVLERFGVDVETADPD
                     VLTRASAKANLVYNSAQTALNDMQFVLDDSTLTGRFALEGERIGYDLTIDKINVDRYL
                     PPAEEGDAAAAAEEEGSLDAVDLPLDVMRTIQARGELKFGETKFSNLTLTNVTFALNA
                     ANGAVRLTPSAQLYGGRLAGQIGLVVEGDSARMTFEQRLDDVNIAALGQDLLGSQDIT
                     GTGDVRLNLMAQGSNLGAMRRDLDGDVGFTVTNGSLEGFDFWYELRRARARIDGTTMP
                     ERGDAPRRTTFSSLSATGVVQDAVLMNNDLNGTLDFMSIDGAGTVNLLNDAIDFDLTA
                     KLVDGPTLQSDPGMAKMAGDTLPLKVTGTIDAPSVLPDFNAIVRQQVQQEVDEAVEEK
                     REEVREELRDRLRGIFNR"
BASE COUNT          486 a         1046 c          994 g          509 t
ORIGIN      
        1 cagctcgtgg agccgggttt caagcccgga gcgccgaggt tcacaagccg gtccggctcc
       61 ggaaccggca acgcgcgaac cagtatctcg tggaacactg agtagaccgc ggtcgtcgcg
      121 ccgatgccga ctgcgagcat caggatcacg acgatcgaaa ggccgggatt gcgcgtcgct
      181 tgcttcagcg catgccgcag gtcgttcatg gccacgtctc ccccgacaac cccgcgacag
      241 gtcttgcaac gcacgtgcca gcgccttcgc attgggcaag tggctgtccc agaagtgcct
      301 ctacggatcg gcgtccgccg cgcgacttca gtcggtcccg gaatcgaatt gcgcagtctc
      361 gcttccggga tgacgtcgct tcaggcgcgc cacagctcga aaccagccgc ggcgaaatcc
      421 gcgtgtcggg ctcggagtag cctactgctg cggcttgaag tccggcggcg ccgacgagcc
      481 ctcgccgaag aagaacttct gcatctcgtc ctcgaggaac ttgcgcgcct tcggctcgat
      541 cgtcgtgagc cggtactcgt tgatcaacat cgtctggtgc ttgagccagc gctgccacgc
      601 gagcttcgac acgttctcgt aaatccgttt gccgagctct cccgggtacg gttgccggtc
      661 gaggccctcc gagtcggggc caagcagcac gcatgtgatt ttccttgcca taccaccact
      721 atgcaggcac aaggccatcc ctgagaagcg ccgcgaccgg agccgggacg cccaccgcga
      781 gcggcttgcc cggcatgcac cagagccaat cgtcgcgatc cgcgatctgc gtgggctctg
      841 ccgcgagcgt cacaaggcgc ggcacgaggt cgagatcgaa atgcgtgaac gcgtgctcga
      901 tgacgcggag cgtgcgctcg gccgcgacct gtgcgccgag cgagcgctcg caccaatcgc
      961 gcggcgactc ctcggccggc aactccggca ggctgtagag cccgccccaa atgccgcttg
     1021 cgggccggcg ctcgagcagc acgcgtccgt cgggagcgct cacgacgagc acggcaacgc
     1081 ttcgttgcgc gcggtcgcgc ttcggccgcg gcgccgggta ctgcgcctgc gtgccggctt
     1141 tggcggccgc gcaatccgcg gcgagtgggc acaccgtgca ggcgggccgt gagcgcgtgc
     1201 agagcgttgc gcccaagtcc atgatcgcct gcgtgtaggc cgcgacgcgc tcgtacggcg
     1261 tgtgcgcttc cgcgtgccgc cagagctcgg cggccacgct cgcagtgccg ggccatcctt
     1321 cgacggcatg gtagcgcgcg agcacgcgct tgacgttccc gtcgaggatc ggccaccgct
     1381 ggtcgaacgc ctgcgagaga attgcgccgg ccgtcgagcg gccgatgccc ggcaacgcgt
     1441 gcagctcgtc gaatgtttcc ggcacgcggc cggcatgccg ttccgcagcg atgtcggcgg
     1501 cgcgcttcag attgcgcgcg cgcgcgtagt agccgagccc ggcccacagc gtgagcacat
     1561 catcgagcgg ggccgaagcg agtgcgctca ccgtcggaaa gcgctgcatg aacttcaggt
     1621 agtacgggat caccgtagtt acctgcgtct gctggagcat gatctcggaa acccataccg
     1681 agtacggcgt gcggttctgc tgccacggca gatcgtgcct gccgtgagca tcgaaccacg
     1741 cgagcaggcg cggcgcgaat gtcgtcatgc gcggaacgcg cggccccgca gggacgacga
     1801 cgtcatcgat tgaagattcc gcgtaaccga tcgcggagct cctcgcggac ctcctcgcgc
     1861 ttctcctcga cggcctcgtc gacttcctgc tggacctgct ggcgcacgat cgcgttgaag
     1921 tccggcagca ccgacggcgc atcgatcgtg cccgtgacct tgagcggcag cgtatcgccg
     1981 gccatcttcg ccataccggg atccgactgg agcgtgggcc catcgacgag cttggcggtc
     2041 aggtcgaagt cgatcgcgtc gttgagcaga ttcaccgtgc cggcgccatc gatcgacatg
     2101 aagtcgagcg tgccgttcaa gtcgttgttc atgagcacgg catcctgcac gacgccggtc
     2161 gcggacagcg acgagaacgt cgtgcgccgc ggcgcatcgc cgcgctccgg catcgtcgtg
     2221 ccgtcgatcc gcgcacgcgc tctccgcagc tcgtaccaga aatcgaatcc ctcgagcgag
     2281 ccgttcgtga ccgtgaaccc cacgtcgccg tcgaggtcgc ggcgcatagc gcccaggttg
     2341 ctgccttgcg ccatgaggtt caggcgcacg tcgccggtgc ccgtgatgtc ctgcgacccg
     2401 agcaggtcct gcccgagcgc cgcgatgttc acgtcgtcca ggcgctgctc gaacgtcatg
     2461 cgcgccgaat ccccttcgac gacgaggccg atttgacccg cgagccggcc gccatagagc
     2521 tgcgcgctcg gcgtgagacg cacggcaccg ttcgcggcgt tcagcgcgaa cgtcacgttc
     2581 gtgagcgtga ggttgctgaa cttcgtctcg ccgaacttca gctcgccgcg tgcttgaatc
     2641 gtgcgcatca cgtcgagcgg caggtcgact gcgtcgagcg agccttcttc ctccgccgcg
     2701 gccgccgcat cgccctcctc cgccggaggc agatagcgat cgacgttgat tttgtcgatc
     2761 gtgaggtcgt agccgatccg ctcgccttcg agcgcgaacc ggcccgtcag cgtggagtcg
     2821 tcgagcacga actgcatgtc gttgagcgcg gtctgcgcgc tgttgtagac gagattcgcc
     2881 ttggcactcg cgcgcgtgag cacgtcgggg tccgccgtct cgacatccac gccgaaacgc
     2941 tcgagcacga cgcgcggcga gaactcgcga aactccaccg caccgttcaa ggccaggttg
     3001 ctcatgagct gccgccccga caacgagccg gccat
//
LOCUS       DATCUD010000685         2035 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42119, whole genome shotgun sequence.
ACCESSION   DATCUD010000685 DATCUD010000000
VERSION     DATCUD010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42119"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..225)
                     /locus_tag="VIQ99_09985"
     CDS             complement(<1..225)
                     /locus_tag="VIQ99_09985"
                     /inference="COORDINATES: protein motif:HMM:NF042483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PA2779 family protein"
                     /protein_id="HEY9183519.1"
                     /translation="MRTRNRNLAVLMTVTLISASLQSIASAGVISTQQYIAAIDRDAT
                     LARIDAVLAREEVRSRLEHHGVDPAAANERI"
     gene            complement(242..475)
                     /locus_tag="VIQ99_09990"
     CDS             complement(242..475)
                     /locus_tag="VIQ99_09990"
                     /inference="COORDINATES: protein motif:HMM:NF024890.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-hand domain-containing protein"
                     /protein_id="HEY9183520.1"
                     /translation="MATKKPTADQLDDLREAFEYNDRDGDGRIQKDEFVAMLDELDAG
                     MTPHEMSVGFQDIDTNDDQLIDFDEFVAWWTED"
     gene            complement(506..>2035)
                     /locus_tag="VIQ99_09995"
     CDS             complement(506..>2035)
                     /locus_tag="VIQ99_09995"
                     /inference="COORDINATES: protein motif:HMM:NF024241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9183521.1"
                     /translation="SRRPAAIAVWHEHARSRRHAARVGRQGMPAGQFSKDPVVDKALR
                     HSVRDGMAFSVQVGAGETYFSAFALFLKATAPQIALISTLPLLLASSAQIFSAWIGSY
                     VGRRRVVILGCALQTLLWLPILLVPVLFTAHSITALLVLIAVYHSANNLAAPQWTSIM
                     RDLVDERRRGRYFAHRTRLTTIATFVSLVACGVILHELDTAGRTYFGFVVIFLIAFVA
                     RTVSVYHLTFLHEPTPTTTPPDMHIEHWWRSLLSTGAIGFSTYAALMNMAVGISSPFF
                     TVYMLRDLKLSYFEFTVLTGTSVLVQFLMLTTWGRIADVYGNRLILIVTSIALPIVPA
                     IWLLSDNFWALLVFQALSGLSWSGFTLSVGNLLYELVPQTRRAAYVAFHNVGTAAGVF
                     GGAMLGALLEGLLPPRGVLFGDSSTLSSLLYLFIISGVARAIVAALLARRVRELRRPR
                     KTMSAQALVLRVTGLNAMVGFIYDFIGRPAADAEEREPAEVSPPADTRAPAAKNGDNS
                     P"
BASE COUNT          395 a          640 c          665 g          335 t
ORIGIN      
        1 gattcgctcg ttcgcggccg cggggtcgac gccgtgatgc tcgaggcggc tgcgaacctc
       61 ctcgcgagcc aacacggcat cgatgcgcgc gagggtggcg tcgcggtcta tggccgcaat
      121 gtattgctgc gtgctgatca cgcccgcgga ggcgatgctc tgaagcgacg cgctgatgag
      181 cgtcacggtc atcagcacgg ccaagttacg atttcgcgtg cgcatgatgt cactcctcgt
      241 gtcagtcctc ggtccaccag gccacgaact cgtcgaagtc gatgagctgg tcgtcgttcg
      301 tatcgatgtc ttggaacccg acgctcatct cgtgcggcgt catgcccgca tcgagctcgt
      361 cgagcatggc tacgaactcg tctttttgga tgcggccatc gccgtcacga tcgttgtatt
      421 cgaacgcttc acgcaggtcg tcgagctgat ctgcggtggg tttcttagta gccattatct
      481 tcacagcccc cggggcatct tggtctcacg ggctattgtc gccgtttttc gcggccggcg
      541 ctcgggtgtc cgcgggcggc gacacttcgg cgggttcccg ctcctctgcg tcggcggccg
      601 ggcggccgat gaagtcgtag atgaagccga ccatcgcgtt caaccccgtt acgcgcagca
      661 ccagcgcttg tgccgacatc gtcttgcgcg gtcgacgcag ctcgcgcacg cgccgcgcga
      721 gcagcgcggc gacaatggca cgcgcgaccc cggagatgat gaacagatac aagagactgc
      781 tcagcgtgct ggaatcgccg aacagcacgc cgcgcggcgg cagcagtccc tcgagcaatg
      841 caccgagcat cgcgccgccg aatacaccgg ccgcggtgcc aacgttgtgg aacgcgacat
      901 aggccgcacg ccttgtttgg ggcacgagct cgtagagcag gttgccgacc gagagcgtga
      961 atcccgacca gctcagcccc gacagcgctt gaaacaccag caatgcccag aaattgtcgg
     1021 acaagagcca gatcgccggc acgatcggca acgcgatgct ggtgacgatc aagatcaggc
     1081 gattgccgta cacgtccgcg atacgtcccc acgtcgtcag catcaggaac tgcacgagca
     1141 cgctcgtgcc cgtgagcacc gtgaactcga aatagctgag cttcagatcg cgcagcatgt
     1201 agaccgtgaa gaacggcgac gagatgccga ctgccatatt catcaaggcc gcataggtcg
     1261 agaagccaat tgcgcccgtg gagagcaaac tgcgccacca gtgctcgatg tgcatgtcgg
     1321 gcggcgtagt cgtcggcgtc ggctcgtgca ggaacgtgag gtgatacacg gaaaccgttc
     1381 gcgcgacgaa cgcgatcaaa aagatcacga cgaagccgaa ataggtgcgg ccggcggtgt
     1441 cgagctcgtg caggatcacg ccgcaagcga cgagactcac gaacgtcgcg atggtcgtga
     1501 ggcgggtgcg atgcgcgaaa taacggccgc gccgccgctc gtcgacgagg tcgcgcatga
     1561 tgctcgtcca ctgtggagcc gcgaggttgt tggcgctgtg gtaaaccgcg atcagcacga
     1621 gcagcgccgt gatcgaatgg gccgtgaaca gcaccggtac gagcaaaatc ggcagccaca
     1681 acagggtttg cagcgcgcaa ccgagaatca cgacgcgccg gcgcccgacg tagctgccga
     1741 tccaggccga gaagatctgc gccgacgagg cgagcaggag cggcagcgtg ctgatcagcg
     1801 cgatctgcgg cgcggtggcc ttcaggaaca gcgcgaacgc cgagaaatag gtctcgccgg
     1861 cgccgacctg caccgagaac gccatgccgt cgcgcaccga gtgccgcagc gctttgtcga
     1921 cgacaggatc cttcgagaac tgcccggcgg gcataccttg acggccgacg cgcgcggcgt
     1981 gtcggcgact cctcgcatgt tcgtgccaga cggcgatcgc cgccggacgg cgcga
//
LOCUS       DATCUD010000686         2658 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_7019, whole genome shotgun sequence.
ACCESSION   DATCUD010000686 DATCUD010000000
VERSION     DATCUD010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2658
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7019"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="VIQ99_10000"
     CDS             <1..443
                     /locus_tag="VIQ99_10000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011745724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HEY9183522.1"
                     /translation="GLGIEGDDTDGHIDDLTRFVSPRTVVTVVEPNRADPNHAPLAAN
                     RRLLDTLRVRGRPLSVVELPMPTPQYLETQRLPASYANFYIANGAVLVPVFGCPADDA
                     ACAVLKDCFPGLKVVPIDCRVLIAGLGALHCLTQQVPAAPTPAS"
     gene            539..1510
                     /locus_tag="VIQ99_10005"
     CDS             539..1510
                     /locus_tag="VIQ99_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013158843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008612 - peptidyl-lysine modification to
                     peptidyl-hypusine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyhypusine synthase family protein"
                     /protein_id="HEY9183523.1"
                     /translation="MGAISDFIRHHYRHFNGAALVDAAEAYVHHLDAGGQMLVTLAGA
                     MSTAELGLSLAEMIRRGKVHAICCTGANLEEDVFNLVAHDHYVRIPNYRYLSPEQEEE
                     LLDQHLNRVTDTCIPEFEAIRRIEGAVLDEWRRADKANQQFFPHEFMYKILRSGVLEQ
                     HYQIDPKDSWLLAAAERDLPMFVPGWEDSTLGNIFAGHCIAGDIDNVHTVRSGIEYMM
                     SLADWYQATCRKGSIGFFQIGGGIAGDFPICVVPMLQQDLQLPDTPRWGYFCQISDST
                     TSYGSYSGAVPNEKITWGKLSASTPKFIIESDATIVAPLMFAHVLGE"
     gene            1515..>2658
                     /gene="speA"
                     /locus_tag="VIQ99_10010"
     CDS             1515..>2658
                     /gene="speA"
                     /locus_tag="VIQ99_10010"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF003763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEY9183524.1"
                     /translation="MSTQPKTKAPPAEWQVSDATDLYRIGSWGDPFFFVNQNGHMAVR
                     ALDEHGTTMDIVDIVNELRRRGVQFPVLLRFQDVLRAQVRRVNEAFRNAIAESNYGNI
                     YRGIYPIKVNQLHEVVDELLDAGRPYGMGLECGSKAELIACLPQIDGDTLLVCNGVKD
                     RTMLSLMIAGQKLGQNIVPVMEKYSEFTDVKGLAFSTGYMSQLGVRVRLATRGAGRWA
                     ESSGTNSKFGLNVAELMRMVNELEAGGQQSKLVLLHCHIGSQIADIQVLKEATKEVTQ
                     IYAELVKRGIGLKYLDVGGGLGVNYDKGHMEEDAGINYSLEEYANAVIFTIKEVCEAN
                     EVPTPTLVTESGRALTAHHSVLIVPVLGAHAKDDPSQDLTVPENAAE"
BASE COUNT          493 a          852 c          859 g          454 t
ORIGIN      
        1 tcgggctcgg catcgaaggc gacgacacgg acggtcacat cgacgacctc acgcgtttcg
       61 tgtcgccgcg cacggtcgta accgtggtcg agccgaatcg ggccgacccg aaccacgcgc
      121 cactcgcggc gaatcgccgc ctgctcgaca cgctgcgcgt gagggggcgg ccgctgagcg
      181 tcgtcgagtt gccgatgccg acgccgcagt atctcgagac ccagcgcttg ccggcgagct
      241 acgcgaattt ctacatcgcg aacggcgcag tgctcgtgcc cgtgttcggc tgcccggccg
      301 acgacgcggc ctgcgcggtc ctgaaggact gcttcccggg actcaaggtc gtgccgatcg
      361 attgccgcgt tctgatcgcg gggttgggcg cgctgcactg cctcacacag caggtgccgg
      421 cggctccgac accggcctca tgagcatcac gacgcgactc cggggttgtg ggccggggct
      481 cgacctcata atcttcacgc tttcgacggg cggctaggcg cctgaggtaa ccaacacgat
      541 gggcgcaatt tcggatttca ttcgccatca ctatcgtcat ttcaacggcg cggcgctcgt
      601 cgacgcggcc gaggcttacg tccatcacct cgacgccggc ggccaaatgc tcgtgacgct
      661 cgcgggcgcg atgagcaccg ccgagctcgg cttgtcgctc gcggagatga tccgccgcgg
      721 caaggtgcac gcgatctgct gcacgggcgc gaacctcgag gaggacgttt tcaacctcgt
      781 cgcgcacgac cactacgtgc ggatcccgaa ctatcggtac ctctcgccgg agcaggaaga
      841 agagctgctc gaccagcacc tgaaccgcgt gacggacacc tgcatcccgg agttcgaggc
      901 gattcgccgt atcgaaggcg cggtcctcga cgagtggcgg cgggccgaca aggccaacca
      961 gcagtttttc ccgcacgaat tcatgtacaa gatcctgcgc tccggcgtgc tcgagcagca
     1021 ttatcagatc gatcccaagg acagctggct gctcgcggcc gcggaacgcg acctgccgat
     1081 gttcgtgccg ggctgggagg actcgacgct cggcaacatc ttcgcgggcc actgcatcgc
     1141 cggcgacatc gacaacgtac acacggtgcg ctcgggcatc gaatacatga tgagcctggc
     1201 cgattggtat caggccacgt gccgcaaggg ctcaatcggg tttttccaga tcggcggcgg
     1261 catcgccggc gacttcccga tctgcgtcgt cccgatgctg cagcaagact tgcagctccc
     1321 ggacacgccg cgctggggct atttctgtca gatcagcgat tcgacgacga gctacggctc
     1381 gtactcgggc gcggtgccga acgagaagat cacctggggc aagctgtcgg cctcgacccc
     1441 gaagttcatc atcgaatctg acgccacgat cgtggcgcca ctcatgttcg ctcacgttct
     1501 cggagaataa ctggatgtcg acgcagccaa agaccaaggc cccgccggcc gagtggcagg
     1561 tttccgatgc taccgatctc tatcggatcg gaagctgggg tgacccgttc ttcttcgtga
     1621 accagaacgg ccacatggcc gtgcgggcgc tcgatgagca tggcaccacg atggacatcg
     1681 tcgacatcgt caacgagctg cggcgccgcg gcgtccagtt cccggtgctg ctgcggttcc
     1741 aggatgtgct gcgcgcgcag gtgcggcgtg tcaacgaggc gttccgcaac gcgatcgcgg
     1801 agtcgaacta cggcaacatc taccgtggca tttatccgat caaggtcaac cagttgcatg
     1861 aggtcgtcga cgagctcctc gacgcgggcc ggccctacgg catgggcctc gagtgcggct
     1921 ccaaggccga gctgatcgcg tgcctgccgc agatcgacgg cgacacgctg ctcgtgtgca
     1981 acggcgtcaa ggatcggacg atgctgtcgc tgatgatcgc ggggcagaag ctcggccaga
     2041 acatcgtgcc cgtcatggag aagtactctg agttcaccga cgtgaaaggc ctcgcgttct
     2101 cgaccggcta catgtcgcag ctcggggtcc gcgtgcgact cgcgactcgt ggagccggcc
     2161 gttgggccga gtcgtccggc acgaactcga agttcggact gaacgtcgcc gagctcatgc
     2221 ggatggtcaa cgagctcgag gcgggcggcc agcaatcgaa gctcgtgctg ctgcattgcc
     2281 atatcggcag ccagatcgcg gatatccaag tgctcaagga agccacgaag gaagtcacac
     2341 agatctatgc cgagctcgtg aaacgcggca tcggcctgaa gtacctcgac gtcggcggcg
     2401 gacttggcgt gaactacgac aagggccaca tggaggaaga cgcgggtatc aactacagcc
     2461 tcgaggaata cgcgaacgcc gtcattttca cgatcaagga ggtctgcgag gccaacgagg
     2521 tgccgacgcc gacgctcgtg accgagagcg gccgcgcttt gacggcgcac cactccgtgc
     2581 tgatcgtgcc ggtgctcggc gcgcatgcga aggacgaccc gagtcaggat ctcacggttc
     2641 cggagaacgc ggccgagc
//
LOCUS       DATCUD010000687         1627 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63049, whole genome shotgun sequence.
ACCESSION   DATCUD010000687 DATCUD010000000
VERSION     DATCUD010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63049"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..347
                     /locus_tag="VIQ99_10015"
     CDS             <1..347
                     /locus_tag="VIQ99_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183525.1"
                     /translation="YAREGGFELRDIVSGELVWAVPLVPPALGSAQIAAMKLDLVVLV
                     RRVELVFSYESPASGNDPGVIVLRRLRDGGTVAMYDVADVAALAVSPDGESFVYSTGV
                     GRTYTALARTPR"
     gene            364..621
                     /locus_tag="VIQ99_10020"
     CDS             364..621
                     /locus_tag="VIQ99_10020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183526.1"
                     /translation="MANPKTRPRSDARALRRQFAAGMRAGLLVVWPVLSALLAAMVGL
                     GIVAGRLLAIMIGACGILLTAPVAAVAVKALTVARGGDGDE"
     gene            635..1021
                     /locus_tag="VIQ99_10025"
     CDS             635..1021
                     /locus_tag="VIQ99_10025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1801 domain-containing protein"
                     /protein_id="HEY9183527.1"
                     /translation="MSTPKDIDAFLARYPDSVRETAAAARKLLKTHLPDVAESLDEAA
                     KLLGYSYAPGYKGLVCTLIMSQTGVKLGIFRGSELPDPKGLMAGEGKVHRHVQLRSPE
                     DTKKPGLGQLLKAALAAWRRRAGATR"
     gene            complement(1018..1428)
                     /locus_tag="VIQ99_10030"
     CDS             complement(1018..1428)
                     /locus_tag="VIQ99_10030"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183528.1"
                     /translation="MKTNLTAVLLASIALALPAGAHHSFPAQYDVNKPITLTGKVTKV
                     EWTNPHIFIYIDVPNEGTGEAVNWALEMGGPNALLRLGWKRDSLKPDDLITIEGSLAR
                     DGSALVNAKSITMVATGKKMLAGSSSDSAATGPR"
     gene            complement(1444..>1627)
                     /locus_tag="VIQ99_10035"
     CDS             complement(1444..>1627)
                     /locus_tag="VIQ99_10035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183529.1"
                     /translation="EEIRRLDFGHLEIKATVDDPKAYTKPWTVTFRQRIVIDAELIDE
                     VCLENEQFVQRMKLPN"
BASE COUNT          251 a          504 c          570 g          302 t
ORIGIN      
        1 cgtacgcacg cgaaggcggc ttcgagctgc gcgatatcgt gagcggtgag ctcgtctggg
       61 ccgtgccgct ggtgccaccc gcgctcggtt cggcgcagat cgcggccatg aagctcgatc
      121 tcgtcgtgct cgtgcggcgc gtggagctcg tcttcagcta cgaatcgccg gccagcggca
      181 acgaccccgg cgtgatcgtg ctgcggcgct tacgcgacgg cggcaccgtc gcgatgtacg
      241 acgtcgcgga cgtggccgcg ctggccgtgt cgccggacgg ggaaagcttc gtttacagca
      301 ccggggtggg gcggacctat acggcgctgg cgcggacgcc acgctgagcg gaggatgtcg
      361 atcgtggcaa atcccaagac gagaccgcgc tccgacgcgc gtgcgctccg gcgacagttc
      421 gcagccggga tgcgggccgg gttgctcgtc gtgtggccgg tcttgtcggc actactggcc
      481 gcaatggtcg ggctcggcat cgtcgccggg cgcctgctcg cgatcatgat cggtgcatgc
      541 gggattctgc tgacggcgcc ggtcgcagcg gtcgcggtca aggcgttgac ggtcgcgcgc
      601 ggcggcgacg gcgacgaatg agaggagtgt gcgaatgtcc acgccgaagg atatcgatgc
      661 attcttggcg cgctatccgg actcggtgcg cgagaccgca gcggccgcgc gcaagttgct
      721 gaaaacgcat ctaccggatg tcgcggagag cctggacgaa gccgcgaagc tgctcggcta
      781 cagctatgcg cccgggtaca aggggctcgt gtgcacgctg atcatgagcc agaccggcgt
      841 gaagctcggg atatttcgcg ggtcggagtt accggacccg aagggcttga tggccggcga
      901 gggaaaggtt catcgccacg tgcagctgcg tagcccggag gacacgaaga agcccggact
      961 cggtcagctg ctgaaggctg cgctcgcagc ctggcgccgg cgagccggcg cgactcgcta
     1021 gcgtggcccg gtggcagcgg agtcgctgct cgagcccgcc agcatcttct tcccggtcgc
     1081 gaccatcgtg atcgatttcg cgttgacgag ggcgctgccg tcgcgcgcga ggctgccttc
     1141 gatcgtgatc aggtcgtcgg gcttcaacga gtcgcgcttc cagcccaggc gcagcagcgc
     1201 gttcgggccg cccatctcga gcgcccagtt cacggcttcg cccgtcccct cattcgggac
     1261 gtcgatgtag atgaagatgt gcgggttcgt ccactcgacc ttcgtgacct tgcccgtcag
     1321 cgtgatcggc ttgttcacgt cgtactgtgc cgggaatgag tggtgggcgc ccgcggggag
     1381 cgcgagcgcg atcgaggcca acaacactgc tgtcagattc gttttcacgt tggtatccct
     1441 agctcaattc ggtagtttca tccgctgaac gaactgctcg ttctccaagc agacttcgtc
     1501 gatcagctcg gcgtcgatga cgatgcgctg ccgaaacgtg actgtccacg gcttcgtgta
     1561 agccttcgga tcgtcgacgg tcgccttgat ctcgagatgg ccgaagtcga gccttcgaat
     1621 ctcttcg
//
LOCUS       DATCUD010000688         1768 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99224, whole genome shotgun sequence.
ACCESSION   DATCUD010000688 DATCUD010000000
VERSION     DATCUD010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99224"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..364
                     /locus_tag="VIQ99_10040"
     CDS             <1..364
                     /locus_tag="VIQ99_10040"
                     /inference="COORDINATES: protein motif:HMM:NF012241.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HEY9183530.1"
                     /translation="LAAERELCWPAAELTERKGDFVVSVALAGFAPAEIDVTATPREI
                     LIKGEKKSEQKGGDEPSQVRWSEFRSNSVLRRVELPSAIDLEKISANLENGLLKIVAP
                     KALSTADAPKRIEVSTRS"
     gene            472..1752
                     /gene="soxC"
                     /locus_tag="VIQ99_10045"
     CDS             472..1752
                     /gene="soxC"
                     /locus_tag="VIQ99_10045"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HEY9183531.1"
                     /translation="MTTNTGSSLEIVAGNGLLHRRLFLTNGAALLGAGSLGLLTARPA
                     GAEPLEIPPWMKTPGAHMSAYGQPSPFEADVQRVVGGTPNVVGSGVSFTPHHRLHGTI
                     TPNSLHFERHHSGVPEIDPEAHRLLIHGAVQRPLTFTVDNLLRYPTVTRIQFLECSGN
                     SGTNLNPQPPQAPCGVIHGLMSCSEWTGVPLAILMEEAGVNRGAGWVLAEGADAAAMS
                     RSVPLDKIMDDAIVALYQNGERLRPENGYPIRLFLPGWEGNMSVKWLRRLKVVNEATM
                     TRDETSHYTDVLLNGKALMFTYPMHVKSIITNPSTGLALQGPGVYEITGLAWSGLGKI
                     ARVEVSADGGRSWADAALSEPVLAKSFTRFRMAWRWGGGSAVLMSRAIDETGAVQPTR
                     ASLVREHGERMNYHNNGIQAWSIAAGGEVSNVYA"
BASE COUNT          328 a          552 c          604 g          284 t
ORIGIN      
        1 gctggcggcg gagcgggagc tgtgctggcc agccgccgag ctgaccgaaa gaaagggcga
       61 cttcgtcgtg agcgttgcgc tcgcgggatt cgcacctgcc gagatcgacg tcaccgctac
      121 gccgcgtgag atcttgatca aaggcgagaa gaagagcgag caaaaaggcg gtgacgagcc
      181 gtcgcaggtt cgttggtcgg aattccgcag caacagcgtg ctccgccgcg tcgagctgcc
      241 ctcggccatc gacctcgaaa agatctccgc gaaccttgaa aacgggctgc tgaaaatcgt
      301 ggcgccgaag gcgctgagca cggccgatgc gcccaagcgg atcgaggtct cgacgcgctc
      361 ctgaacgcgt tccgctagac ggccaccaca cacgtctgcg gggagtcgac agactcgtgc
      421 cgtgcgtgca cgatgacaac gcacgatacg gataacgggg gacgcgcgcc gatgaccacc
      481 aacacgggtt cttcactcga gatcgtcgcc ggtaacggct tgctgcaccg gcgcctattc
      541 ctcacgaacg gcgcggcgtt actcggggcc ggaagtctcg gcttgctgac cgcgcgtccg
      601 gccggcgccg agccgctcga gatcccgccg tggatgaaga cgcccggtgc gcacatgagc
      661 gcttacggac agccgtcgcc cttcgaggcc gacgtgcagc gcgtcgtcgg cggcacgccg
      721 aacgtcgtcg gcagcggcgt gtcgttcacg ccgcatcatc gattgcacgg gacgatcacg
      781 ccgaacagcc tgcatttcga gcgtcatcac agtggcgtgc ccgagatcga tcccgaagcg
      841 catcggctgc tgatccacgg tgcggtgcag cggccgctga cattcacggt ggataacctg
      901 ctgcgctacc cgacggtgac ccgcattcag ttcctcgagt gctccggcaa cagtggtacg
      961 aacttgaatc cgcagccgcc gcaagcgcct tgcggcgtga ttcacgggct gatgtcgtgc
     1021 agcgaatgga ccggtgtgcc gcttgcgatc ctgatggagg aagccggcgt caaccgcggc
     1081 gcgggctggg tccttgccga aggcgcagac gcggctgcga tgagccgcag cgtgccgctc
     1141 gacaagatca tggacgatgc aatcgtcgcg ctgtatcaaa acggcgagcg cttgcgaccc
     1201 gagaacggtt atccgatccg gctgttcctg ccgggctggg aaggcaacat gagcgtgaag
     1261 tggctacggc ggctcaaggt cgtgaacgaa gccacgatga cgcgtgacga gacctcgcac
     1321 tacaccgacg tgcttctgaa cggcaaggcg ttgatgttca cgtatccgat gcacgtcaag
     1381 tcgatcatca cgaacccgtc gacgggcctc gcgttgcagg ggcccggagt ctacgagatc
     1441 accgggctcg cgtggtccgg actgggcaag atcgctcgcg tcgaggtttc agccgacggc
     1501 ggccgaagct gggccgatgc ggcattgtcg gagcccgtgc tcgcgaagtc gttcacacgc
     1561 ttccggatgg cgtggcgttg gggcggcggc tcggccgtgc tcatgagccg tgcgatcgac
     1621 gagacgggcg cggtccagcc gacgcgtgcg agcctcgtgc gggagcacgg cgaacgaatg
     1681 aactaccaca acaacggcat ccaggcttgg agcatcgcgg cgggtgggga ggtcagcaat
     1741 gtctacgcgt aacgttcgcg cgcgtccg
//
LOCUS       DATCUD010000689         2606 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35074, whole genome shotgun sequence.
ACCESSION   DATCUD010000689 DATCUD010000000
VERSION     DATCUD010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35074"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VIQ99_10050"
     CDS             <1..585
                     /locus_tag="VIQ99_10050"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY9183532.1"
                     /translation="RLKFTDVVAPDDGVITSRTVTVGQIAQAGNEMLRLMRKGRIEWR
                     GEAPETRLADLKPGQAVSIFTADGTQYQGTIRVVSPTISSGNRTALVYVDLPADERLR
                     PGMFARGEIEIGASAGFTVPLESIVSADGYSYVFVLGHDNIVARRRIETGGVQEGSME
                     VLSGLEGGERIVVKGAGFLKDGDLVAVSNGASGS"
     gene            582..>2606
                     /locus_tag="VIQ99_10055"
     CDS             582..>2606
                     /locus_tag="VIQ99_10055"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY9183533.1"
                     /translation="MNFVTWSIRNPVPVIVLFIGLTVAGLISFPKLGVLDRPDIEFPA
                     VIVTVTYPGVAPTQMESEITRKVEDAVATIAGIEQMTSTVDEGASTTSIEFRFGTDLS
                     AALDDVRDAMTRIRPDLPADANEPIVSRVTTAGGAVVTWTVASDNMSDTELSWFVDLT
                     VTRELSAVQGVGRVTRVGGVAREIRVDLDPDRMAALGATASDVSRQLRRVQAEYPGGE
                     GRLGGLEQTVRTTGIITSVYDLRALPIGLPDGRSVRLDTIAEVRDQASEQRSAALLDG
                     RPVIGFEIVRSWGASALDVAKDARVVVERLGQEYPHIKFAEASSTVDYIQESFDASME
                     MLIEGAILAIIVVWLFLRDWRATAVSAIALPLSIIPTFWAVWALGYTLNILTLLALSL
                     VVGILVDDAIVEVENIVRHLRMGKKPKEAAMDAAIEIGLAVVATTLTICAVFIPVAFM
                     SGIAGEFFGPFSFTVVVAVLCSLLVARTLTPMMAAYFLKPHDRPERPSRVMAWYLERV
                     RWCLAHRWLTLGVATVAITSMLALAPLLSTAFSPAADSGFTRLTVELAPGASLADTLA
                     VAETARRRLDPLPEVRTVYTTVGAQGGGGNRGPTGGGGSAGNVRRGTLVIQLDNPDGT
                     RGAQQAFERKATEMLRGIPGARFQFEGGGGSSLEVTLVGDEPNRLNLAAAN"
BASE COUNT          387 a          864 c          927 g          428 t
ORIGIN      
        1 cggctcaagt ttacggacgt cgtagcgccc gacgacggcg tcatcacgtc gcggacggta
       61 acggtcggcc agatcgcaca ggccggcaac gagatgctgc gcctcatgcg caaggggcgc
      121 atcgagtggc gcggcgaggc gccggagacg cggctcgcgg atctgaagcc gggccaggcc
      181 gtcagcatct tcacggccga cgggacacag tatcagggca cgattcgcgt ggtctcgccg
      241 acgatttcgt ccggcaaccg cacggcgctt gtgtacgtcg atctcccggc cgacgagcgc
      301 ctgcggcccg gcatgttcgc gcgcggcgag atcgagatcg gtgcgagtgc cgggttcacg
      361 gtgccgctcg agagcatcgt gagcgccgac ggctacagct acgtgttcgt gctcggccac
      421 gacaacatcg tcgcgcgacg gcgcatcgag accggcggcg tccaggaagg ctcgatggaa
      481 gtcctcagcg gcctcgaggg cggcgagagg atcgtcgtca agggtgccgg gttcttgaag
      541 gacggcgacc tcgtcgccgt cagcaacgga gcgagcgggt catgaacttc gtcacttggt
      601 cgatccggaa cccggttccg gtgatcgtgc tattcatcgg gctcacggtc gcggggctca
      661 tcagcttccc gaagctcggc gttctggacc ggcccgacat cgagttcccg gccgtgatcg
      721 tgaccgtgac ttatcccggt gtcgcgccga cgcagatgga aagcgagatc acgcgcaagg
      781 tcgaggacgc cgtcgcgacg atcgccggca tcgagcagat gacgtcgacc gtcgacgagg
      841 gcgcctcgac gacgagcatc gagttccgct tcggcaccga cctgtccgcc gcgctcgacg
      901 atgtgcgcga cgcgatgacc cggatccggc cggatctccc ggccgacgcg aacgagccga
      961 tcgtgtcgcg cgtgacgacg gccggcggtg cggtcgtaac gtggacagtc gcatccgaca
     1021 acatgtcgga caccgagctg tcgtggttcg tcgacctcac ggtcactcgc gagctgtcgg
     1081 ccgtccaagg cgtcgggcgc gtgactcgcg tcggcggcgt cgcgcgcgag attcgcgtcg
     1141 acctcgatcc cgaccgcatg gccgcgctcg gcgcgaccgc gagcgacgtt tcgcgccagc
     1201 tccggcgcgt tcaggccgag tacccgggcg gcgaaggtcg cctcggcggc ctcgagcaga
     1261 cggtccgtac gaccggaatc atcacgtccg tttacgactt gcgcgcattg ccgatcgggt
     1321 tgccggacgg ccgcagtgtc cgcttggaca cgatcgccga ggttcgcgat caggccagcg
     1381 agcagcgctc cgcggcgttg ttggacggcc gaccggtcat cggcttcgag atcgtgcgct
     1441 cgtggggcgc cagcgcgctc gacgtcgcga aggacgcgcg tgtcgtcgtc gaacggctcg
     1501 ggcaggaata cccgcacatc aagttcgccg aggcgagctc cacggtcgat tacatccagg
     1561 agtccttcga cgcctcgatg gagatgctga tcgagggcgc gatcctcgcg atcatcgtcg
     1621 tgtggctgtt cctgcgcgat tggcgcgcga cggccgtctc ggcgatcgcg ctgccgttgt
     1681 cgatcatccc gacgttctgg gccgtctggg cgctcggcta cacgctgaac atcctgacgc
     1741 tgctcgcact gtcgctcgtg gtcggcatcc tcgtcgacga cgcgatcgtc gaggtcgaga
     1801 acatcgtgcg ccacttgcgc atgggcaaga agccgaagga agccgcgatg gacgcggcga
     1861 tcgagatcgg tctcgcagtc gtcgcgacga cgctgacgat ctgcgccgtg ttcattcccg
     1921 tcgcgttcat gagcggcatc gccggcgagt tcttcgggcc gttcagcttc acggtcgtcg
     1981 tggccgtgct gtgctcgttg ctcgtcgcgc gaacgctgac gccgatgatg gcggcgtatt
     2041 tcctgaaacc gcacgaccgg cccgaacgcc cgtcgcgcgt gatggcgtgg tacctcgagc
     2101 gcgtgcgctg gtgccttgcg caccggtggc tcacgctcgg tgtcgcgacc gtcgcgatca
     2161 cgtcgatgct cgcgctggcg ccgttgttgt cgacggcgtt ctcgccggct gcggacagcg
     2221 gcttcacgcg tctgacggtc gagctcgcgc ccggcgcgtc gctcgcggac acgctcgcgg
     2281 tcgcggagac ggcgcggaga cgtttggatc cgctgcccga ggtccggacc gtgtacacga
     2341 cggtcggcgc acagggcggc ggcggtaacc gcggcccgac gggcggcggc ggttccgcgg
     2401 gcaacgtccg gcgcggcacg ctcgtgatcc agctcgacaa cccggacggg acgcgcggcg
     2461 cccagcaggc gttcgagcgc aaggccacgg agatgctgcg cggcatcccg ggcgcgcgct
     2521 tccaattcga gggtggtggc ggcagctcgc tcgaggtcac gctggtcggc gacgagccga
     2581 accggctgaa cctcgccgcg gcgaat
//
LOCUS       DATCUD010000690         2311 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105808, whole genome shotgun sequence.
ACCESSION   DATCUD010000690 DATCUD010000000
VERSION     DATCUD010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105808"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VIQ99_10060"
     CDS             <1..237
                     /locus_tag="VIQ99_10060"
                     /inference="COORDINATES: protein motif:HMM:NF025097.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEY9183534.1"
                     /translation="IAEGHWATPRAVNRVGLKRAGFDEAERRNIDNAIRLVLDRTLTI
                     EEVTMQIASECASSPQIEHLLAFIRSSERGIARA"
     gene            234..1172
                     /locus_tag="VIQ99_10065"
     CDS             234..1172
                     /locus_tag="VIQ99_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010947102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY9183535.1"
                     /translation="MSKLRTAIVGVGYLGRFHAQKHRALDSIDLIGVCDRDPERCRAV
                     AAENSVRAFADHRALVGAVDAVTIAASTSEHFELAKFFLENGVHVLLEKPMTRTSREA
                     AVLAELADRHGLKLQVGHVERFNTALLAARAALTTVRFIECHRLAPFKGRGVDVNVIL
                     DIMIHDLDVILSLVHSKPKTVSAFGMPVLTNDIDIANARIEFENGAVANVTSSRVSTT
                     AQRRFRVFQPNQYVSIDFGSGEVRQVTKQGEGHDLSCLKEERWSLDKGDALLAETKAF
                     VESIQNDTPCIVSGADGVAALKLAEMIGADIARRQI"
     gene            complement(1197..>2311)
                     /locus_tag="VIQ99_10070"
     CDS             complement(1197..>2311)
                     /locus_tag="VIQ99_10070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008927499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY9183536.1"
                     /translation="GGAFEYLPKPFDIDEAIELVSRAARQRSRDDGEQPVVRPTPRII
                     GQAPAMQEVFKAIGRLSRSSMTVLITGESGTGKELVARALHDNSPRAAGPFVALNTSA
                     IAAELLESELFGHEKGAFTGATERRIGRFEQANGGTLFLDEIGDMSVALQTRLLRVLA
                     ESEFFRVGGQTPIRVDVRVIAATHQDLAQGAATGKFREDLYHRLNVMRIEIPPLRQRR
                     EDIKELSRFYLEQAANELGVAPKTLSADALDALQRYDWPGNVRELVNVCRRLTVTAAG
                     REIVAADLPAELGGVGVQSSADWTAGLSHWAEGQLAIIEPAPLLNEALPAFERTLILT
                     ALRHARGKRLEAAKLLGWGRNTLTRKIKELGLEGRV"
BASE COUNT          392 a          771 c          752 g          396 t
ORIGIN      
        1 atcgccgagg gccactgggc cacgccgcgc gccgtgaatc gcgtcggatt gaaacgcgcc
       61 ggtttcgacg aggcggagcg gcgcaacatc gacaacgcaa ttcggctcgt cctcgatcgc
      121 acgctcacga tcgaggaggt cacgatgcag atcgcgagcg agtgcgcgtc gagcccgcaa
      181 atcgagcacc tgctggcttt catccgcagc tccgagcgtg ggatcgcacg cgcgtgagta
      241 agctgcgcac cgcgatcgtc ggtgtcgggt acctcgggcg ttttcacgcg cagaagcacc
      301 gtgcgctcga ctcgatcgac ctcatcggcg tgtgtgaccg cgacccggag cggtgccggg
      361 cagtcgcggc cgaaaacagt gtccgcgcgt ttgcggatca ccgtgcgttg gtgggtgccg
      421 tcgacgcagt cacgatcgcg gccagcacct ccgagcactt cgagctcgcg aagttctttc
      481 tcgagaacgg cgtgcacgtt ctgctcgaaa agccgatgac acggacgagc cgggaagccg
      541 cggtgctggc cgagctcgcc gaccggcacg gcttgaagct tcaagtcggg cacgtcgagc
      601 gcttcaatac tgcgttgctc gctgcgcgcg cggcgctgac cacggtgcgt ttcatcgagt
      661 gccatcgcct ggcaccgttc aaaggccgtg gcgtcgacgt caacgtgatt ctcgacatca
      721 tgatccacga cttggacgtg attctgtcgc tcgtccactc gaagccgaaa accgtctctg
      781 cgttcggcat gccggtgctg acgaacgaca tcgatatcgc gaacgcgcgg atcgagttcg
      841 agaacggcgc ggtcgcgaac gtcacgtcgt cacgcgtctc gaccacggcg cagcgccgct
      901 tccgcgtgtt tcaaccgaat cagtacgttt cgatcgactt cggcagcggg gaggtgcgcc
      961 aggtgacgaa gcaaggcgaa gggcacgacc tgtcgtgcct aaaggaagag agatggagtc
     1021 tcgacaaggg tgacgcgctg ctggccgaga cgaaggcgtt cgtcgagtcg atccagaacg
     1081 acacgccttg catcgtgtcc ggtgccgacg gagtcgccgc cctcaagctc gccgagatga
     1141 tcggcgccga tatcgcgcgc cgtcagatct gaccctttgg gcgcacgccc aaagggtcac
     1201 acgcggcctt cgaggccgag ctccttgatc ttgcgcgtca gcgtgttccg cccccagccg
     1261 agcagcttgg cggcctcgag gcgcttgccg cgcgcgtggc gcagggcggt caagatcagc
     1321 gtacgctcga acgccgggag tgcctcgttc agaagcggcg ccggctcgat gatcgcgagc
     1381 tgcccttcgg cccagtgtga taggcccgcg gtccaatctg cgctcgactg cacgcccacg
     1441 ccgccgagct ccgcgggcag atccgcggcc acgatctcgc gaccggcggc ggtcacggtc
     1501 aggcgccggc aaacgttgac gagctcgcgc acgttgccgg gccagtcgta ccgctgcagc
     1561 gcgtccagcg catcggcgct caacgttttc ggcgcgacgc cgagctcgtt cgcggcttgc
     1621 tcgagataga accgcgacaa ctccttgatg tcctcgcggc gctgccgcag cggagggatc
     1681 tcgatccgca tcacgttgag tcgatggtag aggtcctcgc ggaacttgcc ggtcgccgcg
     1741 ccttgcgcaa gatcctggtg agtcgcggcg atcacgcgca catcgacgcg aatcggagtc
     1801 tgcccgccga ctctgaagaa ctcgctttcc gccagcacgc gcaacaagcg cgtctgcagc
     1861 gcgaccgaca tgtcgccgat ctcgtcgaga aacaacgttc cgccgttcgc ttgctcgaaa
     1921 cgcccgatgc gcctttccgt cgcacccgtg aatgcgcctt tttcgtggcc gaacaactcg
     1981 gactcgagca gctcggctgc gatcgcggac gtattcagcg ccacgaacgg gcccgccgcg
     2041 cgaggcgaat tgtcgtgcaa cgcacgcgcg acgagctcct taccggtgcc ggattcgccg
     2101 gtgatcagca cggtcatgct cgaccgcgac agtcgcccga tcgccttgaa gacctcttgc
     2161 atcgcgggtg cctgaccgat gatccggggc gtgggccgca cgacgggttg ctcgccatcg
     2221 tcgcgactgc gttggcgcgc ggcccgcgac acgagctcga tggcttcgtc gatgtcgaac
     2281 ggcttcggca gatactcgaa cgcgccgccc t
//
LOCUS       DATCUD010000691         3795 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56511, whole genome shotgun sequence.
ACCESSION   DATCUD010000691 DATCUD010000000
VERSION     DATCUD010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56511"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..668)
                     /locus_tag="VIQ99_10075"
     CDS             complement(<1..668)
                     /locus_tag="VIQ99_10075"
                     /inference="COORDINATES: protein motif:HMM:NF019222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1552 domain-containing protein"
                     /protein_id="HEY9183537.1"
                     /translation="MYLTKRHLSRRTVLKGAGVSLALPLLDAMIPAATALAQTAAAPK
                     LKVGFFYIPHGAIQWNTAYGADMDRWTPSGTGADFKLSEILSPLENLKRYVTSFSHLE
                     NKANENSVHAIVPATWLSGTRPDSRSQSASMATTIDQMIAAHLGQDTPLPSLEVASET
                     TAQVAACPSGAGCYYSTTLSFRDATSPLPMEFNPRKVFTQLFGEGDTDAERAAINAQT
                     RSLL"
     gene            complement(682..3096)
                     /locus_tag="VIQ99_10080"
     CDS             complement(682..3096)
                     /locus_tag="VIQ99_10080"
                     /inference="COORDINATES: protein motif:HMM:NF019259.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1592 domain-containing protein"
                     /protein_id="HEY9183538.1"
                     /translation="MSPRVLVGLGIAAVGVVALLVWRANFGDNAEEQWALVQTYCVEC
                     HNAAEAAGGTVFEGLSPEAVADHPEIFEVAIRKLRGRLMPPPGGAQPDQHSVDALIAW
                     LERTIDRNAVMPRAGHVPIQRLNRTEYAAAVKDLVGVEIDTAEFLPAEIEVDGFDNIA
                     AALSVSPAFLEQYIGVARHVARLAVGESIPKVTSVSFPGATDDQDDYVDGMPLGTRGG
                     VRFTHNFLADGEYRITITDLDVGLYARSLESEHTVVMLLDRNEVFRAQLGGREDLNFV
                     NRGGAPARAEIMQRFTKIPVQITAGVHEIAITFIERSRAATEDHIFGFQPYGGFSYTG
                     EMRVPRLIGNIGVEGPFGSTGLSRTASRDKIFVCAPAVAADERPCAERIAKSLATRAF
                     RRPASADDLARLLPFWENGRTAGNFDTGVEQLLTAVLASPDFLYRAIAPEAGDAAEAF
                     ALDDFELASRLSFFIWSQGPDDELLELAAAGKLGDEDVIEDQVERMLADPRAQALVKG
                     FALRWLNVDELEAVVPDERLFPEFSDELRADFAHEIELFVASVLLENRNVHELLTAEH
                     TFVNERLARHYGMGAVHGPQFRRVTVEDDARRGLLGKGAVLLRTSYGDRTSPVLRGAW
                     VLDKLMGTPPTPPPPNVETDLSTPPGEKPKTVRARLEQHREDATCNGCHGVIDPYGLA
                     LETFSATGQWREFDRVAEEEIDASTVLPGGQAVNGPVELRDALLRRPDQFVQALTTKL
                     MMYALGRELEYFDMPQVRAAVRAAERDDYRFAAIVTGIVNSDSFRMQAPPRFDTNRVT
                     ARAGAE"
     gene            3249..>3795
                     /locus_tag="VIQ99_10085"
     CDS             3249..>3795
                     /locus_tag="VIQ99_10085"
                     /inference="COORDINATES: protein motif:HMM:NF017745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF885 family protein"
                     /protein_id="HEY9183539.1"
                     /translation="MRRTLLLAALLIVGCDAQAPVPAPPAAAVAEAESARLNEWFDAR
                     FEEQLDFSPLTKTQLGRKDDYDKIDELSESALDAQLEWRRRTVADLRRDFDREALTPE
                     ARTSYDLWIYALERAEAAQPFRRRSYVFHQMGGGHTGLPQALITLHRVDEEADMVAYV
                     ARIAGVGRAVGQLLERARLAAD"
BASE COUNT          604 a         1266 c         1295 g          630 t
ORIGIN      
        1 tcgagcaggc tgcgcgtttg cgcgttgatc gccgcgcgct cggcatcggt gtcgccttcg
       61 ccgaacagct gcgtgaagac cttgcgcggg ttgaactcca tcggcagcgg cgacgtcgcg
      121 tcgcggaacg acagcgtcgt cgagtagtag caaccggcgc ccgacgggca ggccgcgacc
      181 tgcgccgtgg tctcggaggc cacctcgagc gacggcaggg gcgtgtcttg acccaagtgc
      241 gcggcgatca tctggtcgat cgtcgtcgcc atgctcgcgc tctgcgagcg gctgtcgggc
      301 cgggtgcccg acagccacgt cgccggcacg atcgcgtgca cggagttctc gttggccttg
      361 ttctcgaggt gcgagaacga cgtgacgtaa cgcttcaggt tctcgagcgg cgacaggatc
      421 tcgctcaact tgaagtcggc gcctgtgccg ctcggcgtcc accgatccat gtccgcgccg
      481 tacgccgtgt tccattgaat cgcgccgtgc gggatataga agaagccgac cttcagcttc
      541 ggcgccgcgg ccgtctgtgc gagcgccgtc gccgcgggaa tcattgcgtc cagcagcggc
      601 aacgcgagcg acacgccggc gcccttcagc accgtgcggc gcgacagatg ccttttcgtc
      661 aaatacatgg cccaactacc tctactcggc cccggcacgc gccgtgactc gattcgtgtc
      721 gaagcgcggc ggcgcctgca tccggaacga atcgctgttg acgatgcccg tgacgatcgc
      781 ggcgaaccgg tagtcgtcgc gttcggccgc gcgcactgcg gcgcgcacct gcggcatgtc
      841 gaagtactcg agctcgcgcc caagcgcata catcatgagc ttcgtggtca gcgcttgcac
      901 gaactggtcg gggcggcgca gcagcgcgtc gcgtagctcg accgggccat tcacggcttg
      961 tccgcccggc agcacggtcg acgcatcgat ctcttcctcg gcgacgcggt cgaactcgcg
     1021 ccactggccg gttgccgaga acgtctcgag cgccaagccg tacgggtcga tcacgccgtg
     1081 acagccgttg caagttgcat cctcgcgatg ctgctcgagc cgagcgcgaa ccgttttcgg
     1141 tttctcgccg ggcggcgtcg agagatccgt ttcgacgttc ggaggcggtg gcgtgggcgg
     1201 cgtgcccatc agcttgtcca gcacccacgc gccgcgcagc accggcgacg tgcggtcgcc
     1261 gtacgacgtt cgtagcagca cggcgccctt gccgagcagg ccgcggcgtg catcgtcctc
     1321 gaccgtaacg cggcggaact gcgggccgtg gaccgcgccc atgccgtagt ggcgtgcgag
     1381 ccgctcgttc acgaacgtgt gctccgccgt cagcagctcg tgcacgttgc ggttctcgag
     1441 caggacgctc gcgacgaaga gctcgatctc atgcgcgaag tcggcgcgga gctcgtcgga
     1501 gaactcgggg aacagcctct cgtcgggcac gacggcttcg agctcgtcga cgttgagcca
     1561 gcgcagcgcg aaccccttca cgagcgcctg cgctcgaggg tccgcgagca tgcgctcgac
     1621 ttggtcttcg atgacgtcct cgtcaccgag cttgcctgcg gccgcgagct cgagcagctc
     1681 gtcgtcgggg ccctggctcc agatgaagaa cgagaggcgc gacgcgagct cgaagtcgtc
     1741 gagcgcgaag gcctcggcgg cgtcgccggc ctcgggcgcg atcgcgcggt acaggaaatc
     1801 cgggctcgcg agcacggccg tcaggagctg ctcgacaccg gtatcgaagt taccggccgt
     1861 tcgaccgttc tcccagaacg gcagcaggcg cgcgagatcg tccgcgcttg cagggcggcg
     1921 gaaagcacgc gtcgcgagcg acttcgcgat gcgctcggcg cagggccgct catcggccgc
     1981 aactgcaggc gcgcagacga agatcttgtc gcggcttgcc gtgcgcgaca agcccgtcga
     2041 accgaacggg ccttcgacac cgatgttgcc gatcaggcgc ggcactcgca tttcgcccgt
     2101 gtagctgaac ccgccgtacg gctggaagcc gaaaatgtgg tcttcggtcg cagcacgcga
     2161 tcgctcgatg aacgtgatcg cgatctcgtg cacgccggca gtaatttgga cgggaatctt
     2221 cgtgaaacgc tgcatgatct cggcccgggc cggcgcgccg ccgcggttca cgaagttcaa
     2281 atcttcgcgc ccgccgagct gcgcgcgaaa tacctcgttg cgatcgagca gcatgacgac
     2341 ggtgtgctcg ctctcgagcg agcgcgcgta gaggcccaca tcgaggtcgg tgatcgtgat
     2401 tcggtattcg ccgtcggcca ggaaattgtg cgtgaagcgc acgccgccgc gcgtgccgag
     2461 cggcatgccg tcgacgtagt cgtcctggtc gtccgtcgcc cccgggaacg agacgctcgt
     2521 gactttcgga atcgactcgc cgacggcgag gcgcgcgacg tgacgcgcaa caccgatgta
     2581 ttgctccaag aacgccggcg agacgctgag cgcggccgcg atattgtcga agccgtcgac
     2641 ctcgatctcc gcgggcaaga actcggccgt gtcgatctcg acgccgacga ggtccttcac
     2701 ggcggccgcg tactcggtgc ggttcagtcg ctggatcgga acgtggccgg cgcgcggcat
     2761 gaccgcgttg cggtcgatcg tccgttcgag ccacgcgatc agcgcgtcga cgctgtgctg
     2821 gtcgggctgc gccccgccgg gcggaggcat caggcgaccg cgcagcttgc ggatggcgac
     2881 ctcgaagatc tcgggatggt ccgcgacggc ctcgggactc aagccctcga ataccgttcc
     2941 gcccgcggcc tcggccgcgt tatggcattc gacgcagtag gtctgaacca gcgcccactg
     3001 ctcctctgcg ttatccccga aattcgccct ccaaaccagc agcgccacaa cgccgacggc
     3061 ggcgattccg aggccgacga ggacacgggg gctcatagcg gtctcttata aaggagtggg
     3121 tcgagggcgt ccagccgact cggccaaact ccagattcgt gtcggtagcc cggctcgatg
     3181 ccgccggtgc tatcgttgcc ggcgttaggt cttgcgacgt taggtcttac gaaatcgagg
     3241 ggatcacgat gcgacgcacg ttgctactcg ccgctctact gatcgtcggc tgcgacgctc
     3301 aagctcccgt gccggcgccg ccggccgcag cggtcgccga ggccgaaagc gcgcgcctga
     3361 acgaatggtt cgacgcgcgc ttcgaggaac aactcgactt cagcccgttg acgaagacgc
     3421 agctcggccg caaggacgac tacgacaaga tcgacgagct ctccgagagc gcgttggacg
     3481 cgcagctcga gtggcgccga cggaccgtcg ccgatttgcg gcgcgacttc gatcgcgagg
     3541 cgctcacgcc cgaagcacgg acgtcgtacg acctgtggat ctacgcgctc gagcgtgcgg
     3601 aagcggcaca gccgttccgg cggcgcagct acgtgttcca tcagatgggc ggcggacata
     3661 cggggttgcc gcaggcgttg atcacgctgc atcgcgtcga cgaggaggcc gacatggtcg
     3721 cgtacgtcgc gcggatcgcg ggtgtcggcc gtgcggtggg tcagctcctc gagcgcgcgc
     3781 ggctcgcggc cgacg
//
LOCUS       DATCUD010000692         3329 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105827, whole genome shotgun sequence.
ACCESSION   DATCUD010000692 DATCUD010000000
VERSION     DATCUD010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3329
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105827"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..1858
                     /gene="ilvD"
                     /locus_tag="VIQ99_10090"
     CDS             155..1858
                     /gene="ilvD"
                     /locus_tag="VIQ99_10090"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009513291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY9183540.1"
                     /translation="MAKKDQDAPGIDPRRHSRVIVDGLTQAPSRAMLRAVGFTDADFA
                     KPQVGIASTWNMVTPCNMHIDGLARHAGAGADAAGAKSVLFNTITVSDGIANGTPGMR
                     YSLVSREVIADSIETVASAEGFDGLVTIGGCDKNMPGCVMAMARLDRPSIFVYGGTIQ
                     PGPKNRDIISVFEAVGSYAAGKIDDAELKEVESTAIPGPGSCAGMYTANTMASAIEAL
                     GLSLANSSAQEAVSNAKADDCRRAGEAVVALINRGIKPSDILSKEAFENAITTVIALG
                     GSTNAVLHLLAIAHEARVALTLDDFTRIGDRTPVLADLRPSGRYMMSELIRIGGIQPL
                     QKTLLDAGLLHGGCLTVTGSTLAENLASVRPYPAGQTIVRPLSEPIKKESHLAVLYGN
                     LAPEGAVAKISGKEGTRFEGRARVFDSEHDALRAIIDGGVVAGDVIVIRYEGPKGAPG
                     MPEMLSPTGAVIGRGLGGKVALITDGRFSGGSHGFVVGHITPEAAVGGPIAVVENGDP
                     IVIDATRKTIELGVPQASLDARLRAWKRPPPKAERGLLAKYARLVSSASQGAVTDLNL
                     L"
     gene            1876..>3329
                     /locus_tag="VIQ99_10095"
     CDS             1876..>3329
                     /locus_tag="VIQ99_10095"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY9183541.1"
                     /translation="MSSQPVLGASQAVATPYPDSPWVVLKFGGRSVSTADNWAIIARL
                     IRERLAEGVRPVVVHSALVGVSNALIALLDTAVAGGDTDEKLAKIRAQHDALAKDLGV
                     DPALFDERFAALAQVVSGIKLTGEVSPRIHARVLSVGELAATELGAAYLRKAGLKIAW
                     LDIREYLESTPLRDQTERARFISARCDFSPDKALQKRFAAIDGVVLSQGFIARNAQGE
                     TVLLGRGGSDTSGAYLAGKLEARRLEIWTDAPGFFSADPKAVPSARLIKSLHYREAQE
                     IASAGGGILHPRSISPVRATGIPLYLKCTTHPEWEGSVISNAPSDDQPQLKAISHRSG
                     ITLLSMESMEMWHQVGFLADAFNVFREHGISVDLISTSESNVTVSIDTAQNVTTAAAI
                     EALAADLRKLCKVTIIGDCAAVTLVGQRIRTILHELTPVLEVFQEQQVHLVTQAANDL
                     NLTFVVNSEHAYRLVQHLHGLLVGKFEGGVFGET"
BASE COUNT          581 a         1106 c         1114 g          528 t
ORIGIN      
        1 ccggatcata gctattgagc ccctaggtcg caaagcgagg ctactccgct gattccccaa
       61 ggtttcgggg cggggctctc ccagcccccc gggttgcccg agcgtggcgc ccccgccata
      121 atcgctgccc cgcaaacgcc ccgccgcccg aatcatggcc aagaaggatc aagacgcgcc
      181 tgggatcgac ccgcgccggc attcgcgagt catcgtggac gggctgaccc aggccccgag
      241 ccgggccatg ctgcgtgccg tcgggttcac ggacgccgat ttcgcgaagc ctcaggtcgg
      301 catcgcgtcc acctggaaca tggtcacgcc gtgcaacatg cacatcgacg ggctggcgcg
      361 gcacgcgggg gccggcgccg acgccgcggg cgcgaagagc gtcctgttca acacgatcac
      421 ggtgtcggac ggtatcgcga acggcacgcc gggcatgcgc tactcgctcg tgtcgcgcga
      481 agtcatcgcg gattcgatcg aaacggtggc atcggccgaa ggcttcgacg ggctcgtcac
      541 gatcggcggc tgcgacaaga acatgccggg ctgcgtgatg gcgatggcac gcctcgatcg
      601 gccttcgatc ttcgtctacg gcggcacgat tcaacccggg ccgaagaacc gcgacatcat
      661 ctccgtgttc gaggccgtcg gcagctacgc ggccggcaag atcgacgacg ccgagctcaa
      721 agaagtggag tccacggcca ttccgggccc cggctcctgc gccggcatgt acacggccaa
      781 cacgatggcc tcggcgatcg aggcgctcgg cctgagcttg gcgaacagct cggcacaaga
      841 agccgtctcg aatgccaagg ccgacgattg tcggcgtgcc ggcgaagccg tcgtggccct
      901 gatcaatcgc ggcatcaagc cgtcggacat cctgagcaag gaggcattcg agaacgcgat
      961 cacaaccgtg attgcgctgg gcgggtccac gaacgccgtg ctgcacctgc tcgcgatcgc
     1021 tcacgaggcg cgtgtggcgc tcacgttgga cgacttcacg cgcatcggcg atcgcacgcc
     1081 ggtgctggcc gatctgcggc ccagcggccg ctacatgatg tccgagctga tccggatcgg
     1141 cggcatccag ccgttgcaga agacgctgct cgacgcgggc ttgctgcatg gcggatgtct
     1201 gaccgtcacc ggcagcacgc tggccgaaaa tttggcctcc gtgcgtccgt acccggcagg
     1261 gcaaacgatc gtgcggccgc tctcagagcc gatcaagaaa gagagccacc tcgcggtgct
     1321 ctatggcaac ctcgcgccgg aaggcgcggt cgcgaaaatc tcgggcaagg aaggcacgcg
     1381 attcgaaggt cgcgcgcgcg tgttcgattc cgagcatgat gcgctgcgcg cgatcatcga
     1441 cggcggcgtg gtggcaggcg atgtcatcgt gatccgctac gagggaccga aaggggcgcc
     1501 cggaatgccc gagatgctga gcccgaccgg cgccgtgatc gggcgcgggc tcggaggcaa
     1561 ggtcgcgctg atcacggacg gccggttctc gggcggtagc catggcttcg tggtcggcca
     1621 catcacgccc gaggcagcgg tcggcggacc gatcgcggtc gtcgagaacg gcgatccgat
     1681 cgtgatcgac gccacgcgca agaccatcga gctcggcgtc ccgcaggcca gcctggatgc
     1741 gcggctacgc gcgtggaaac ggccgccgcc gaaagccgag cgcggcttgc tcgcgaaata
     1801 cgcgcgcctc gtgagctccg cctcacaggg cgccgtgacc gatctcaact tgctctgaag
     1861 cgttagaggc cattcatgtc gtcacaaccg gtgctcggcg cgagccaagc cgtcgctacg
     1921 ccgtaccccg actcgccgtg ggtcgtgctg aagttcggcg gccgcagcgt ctcgacagcc
     1981 gacaactggg ccatcatcgc gagactgatc cgcgaacgcc tcgctgaagg cgttcgaccc
     2041 gtggtcgtgc attcggcgct cgtgggcgtc tcgaacgcgc tgatcgcgct gctcgacacg
     2101 gccgtggcgg gaggcgacac ggacgagaag ctcgcgaaga tccgcgcaca gcatgacgcg
     2161 ctcgcgaagg atctcggcgt cgatccggcg ctgttcgacg agcgctttgc agcgctcgcg
     2221 caggtcgtct cgggcatcaa gctgaccggc gaagtcagtc cgcgcatcca cgcgcgcgtc
     2281 ttgagcgtag gcgagctcgc ggccacggag ctcggcgccg cctatctgcg gaaggccggg
     2341 ctaaaaatcg cttggctcga catccgcgag tacttggaaa gtacgccgtt gcgcgatcaa
     2401 acggaacgtg cacgtttcat ctcggcgcgg tgcgacttct cgcccgacaa ggcgctgcag
     2461 aagcgcttcg cggcgatcga cggcgtcgtg ctgtcgcagg gtttcatcgc gcgcaacgcc
     2521 cagggcgaga ccgtgctact cggccgcggc ggatcggaca cgtcgggcgc ttatctggct
     2581 ggcaagctcg aggcgcgccg tctcgagatc tggaccgacg cgccggggtt cttcagcgcc
     2641 gacccgaaag ccgtgccgtc agcccggctg atcaagagcc tgcactaccg tgaggcccag
     2701 gagatcgcct cggccggcgg cggcatcttg cacccgcgca gcatctcgcc cgtgcgcgcc
     2761 accggcattc cgctgtacct gaagtgcacg acgcaccccg agtgggaagg cagcgtgatc
     2821 tcgaacgcgc cgagcgacga ccagccgcag ctgaaggcga tctcgcatcg cagcggcatc
     2881 acgctcctgt cgatggagtc gatggagatg tggcaccagg tcggtttcct cgccgacgcg
     2941 ttcaacgtgt tccgcgagca cggtatctcc gtggatctga tctcgacgtc ggagagcaac
     3001 gttacggtct cgatcgacac ggcccagaat gtgacgacgg ctgcggccat cgaggcgctc
     3061 gcggccgatc tgcgcaagct ctgcaaagtc acgatcatcg gcgactgcgc cgccgtgacg
     3121 ctggtcggcc agcgcatccg cacgattctc cacgagctca cgcccgtgct cgaagtgttc
     3181 caagagcaac aggtgcacct cgtcacccag gctgccaacg atttgaacct cacgttcgtc
     3241 gtgaattcgg agcacgccta tcggctcgtg cagcatctgc acggcttgct ggtggggaag
     3301 ttcgaaggtg gcgtgttcgg ggaaacctg
//
LOCUS       DATCUD010000693         2546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42194, whole genome shotgun sequence.
ACCESSION   DATCUD010000693 DATCUD010000000
VERSION     DATCUD010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42194"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            296..940
                     /locus_tag="VIQ99_10100"
     CDS             296..940
                     /locus_tag="VIQ99_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008945910.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HEY9183542.1"
                     /translation="MDFVSLPELIALAQVIVVDLVLAGDNAIVVGIAVAGLPAEQRWR
                     VMVLGIAAATLLRIVFALFTVQLLQIIGLLLAGGILLLWVCWKLWRELRSGRLVHGAE
                     PHEVPTEVRSGGEAPPLPHKTMRQAAIQIVVADVSMSLDNVLAVAGVAREHAWVLVFG
                     LALSVAFMGLAAAVIARLLARFHWIAYVGLAIIFYVSLRMIYEGTIEVIAATAG"
     gene            complement(937..1398)
                     /locus_tag="VIQ99_10105"
     CDS             complement(937..1398)
                     /locus_tag="VIQ99_10105"
                     /inference="COORDINATES: protein motif:HMM:NF021049.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiD C-terminal domain-containing protein"
                     /protein_id="HEY9183543.1"
                     /translation="MTDRSELLRELETTWHRDIPLAAAMGIGVQSYDGAVLAAHAPLL
                     PNRNVHGTAFAGSLFSLCVLTGWGATWLKFRECGLAGMIVVADSRIQYRKAVTGDLVC
                     RCAPDPSALDTGLAQFQSVGRLRLDLNCTIDVGDKRAVSFTGTYVVHAEKH"
     gene            1501..2415
                     /locus_tag="VIQ99_10110"
     CDS             1501..2415
                     /locus_tag="VIQ99_10110"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183544.1"
                     /translation="MSNSQLKLTLWALPVTVLAAPAFGQAQQDFSQVQIKVHQVSGSV
                     HYLEGQGGNVGVLIGDDGVLMIDDQFAPLSEKLAAAIKTLSQKPIRMLINTHVHGDHT
                     GGNENFGKMGVDIVAHDNVRVRLARGVNNAAPSPAVALPVVTYGDTMKLHLNGETVTI
                     GKLPPAHTDGDSYIHFANADVLHVGDVFRTVGYPGVDGNNGGSVKGTIDALQAIVDLA
                     GPNTKIIPGHGVVSTRDDVAAFRTNTIEAQRRVTELIRQGMTVEQVVAANPTADLGAK
                     FATSGPPPDEAATQRFLTGFYNALKSEL"
BASE COUNT          428 a          821 c          871 g          426 t
ORIGIN      
        1 gtgacgatga cttcctcgag cgccggttct tgcgccggcg gcgtttgcgc gtgagcggcc
       61 gcgccgagca gaagggttgg agccgcgcaa aaagcgaggc gggggtacca gcgaggtgaa
      121 tgcatcagga atcccgttcg agatcgaggt gtttcgccgc gcggtatcat gacccagcag
      181 agcctgcggc ggcaacgacg cgggcagagg ggctcaccgt caagctcacc tacgtgaatt
      241 ggcggcccgt tccgggcaca ctttccaacc cgcagcgagg cacggaccgc gtcttatgga
      301 ttttgtctcc ttgccggagc tcatagcgct cgcgcaagtc atcgtcgtgg acctggtcct
      361 ggccggcgac aatgcgatcg tggtcggcat cgcggtcgcg gggctgccgg cggagcagcg
      421 ctggcgcgtg atggtgctcg gtatcgccgc cgccacgttg ctgcgaatag tgttcgcgtt
      481 gttcacggtt cagcttctgc aaatcatcgg cttgttgctc gccgggggca tcttgctgct
      541 gtgggtgtgc tggaagctgt ggcgcgagct ccggagcggc cgtctcgtgc acggcgctga
      601 gccgcacgag gtcccgaccg aggtgcggag cggcggcgaa gctccgccgc tgccgcacaa
      661 gacgatgcgc caggctgcga ttcaaatcgt cgtggccgac gtgtcgatgt cgctggacaa
      721 cgtgctcgcg gtggccggcg tcgcgcgcga gcacgcgtgg gtgctcgtgt tcgggctcgc
      781 gctgtcggtc gcgttcatgg gcctcgcagc cgccgtgatc gcgcgactgc tcgcgcggtt
      841 tcattggatc gcgtacgtcg gcctcgcgat catcttctac gtgtcgttgc ggatgatcta
      901 cgaaggcacg atcgaagtca tcgccgcgac ggccggctaa tgcttctcag cgtgcacgac
      961 gtaagtgccc gtgaagctca cggcgcgttt gtccccgacg tcgatcgtgc agttgaggtc
     1021 gaggcgcaac cgcccgaccg actgaaactg cgcgagcccg gtgtcgagcg cgctcggatc
     1081 gggcgcgcac cggcacacta ggtcgccggt cacggccttt cgatactgta tccggctgtc
     1141 ggcgacgacg atcatcccag ccaacccgca ctcgcggaac ttgagccagg ttgcgcccca
     1201 gccggtcaat acgcacaacg agaacaggct gcccgcaaac gcggtcccgt gcacgttgcg
     1261 attgggcagc agcggcgcat gcgcggccaa caccgcgccg tcgtagctct ggacgccgat
     1321 gcccatcgcg gcggccaacg ggatatcccg gtgccaggtg gtctcgagct ctctcaagag
     1381 ttcggatcgg tcggtcatgg caccgagtat ggcatgggct ttcggcgtcg gcgttcgccg
     1441 ctgccaacgc ccgcgcaccc ggtgctatga tcgggccaat caagagctcg ggggagagcc
     1501 atgtcgaaca gccagctgaa actcacgctt tgggcgttgc ccgtcaccgt gctggcggcg
     1561 ccggccttcg gccaggcgca acaggatttc tcgcaggtgc aaatcaaggt gcaccaggtg
     1621 tccggcagcg ttcattatct cgaagggcag ggcggcaatg tcggcgtgct catcggcgat
     1681 gacggcgtgc tcatgatcga cgatcagttt gccccgctct ccgagaagct cgcggctgcg
     1741 atcaagactc tgtcacagaa gccgatccgg atgctgatca acacccacgt ccacggcgac
     1801 cacaccggtg gcaacgagaa cttcggcaag atgggcgtcg acatcgtcgc gcacgacaac
     1861 gtgcgtgtgc gcctcgcgcg tggcgtgaac aatgctgcgc cgtcgccggc cgtggcgctg
     1921 cccgtggtca cgtacggtga cacgatgaag ctgcatctga acggcgaaac cgtgacgatc
     1981 ggcaagttgc cgccggcgca cacggacggc gacagctaca tccacttcgc gaacgccgac
     2041 gtgctgcacg tcggcgacgt gttccgaacc gtcggctatc ccggtgtgga cggcaacaat
     2101 ggcggcagcg tcaaaggcac gatcgacgcg ctgcaagcga tcgtcgacct ggccgggccg
     2161 aacacgaaga tcatcccggg ccacggcgtc gtgtcgacgc gcgacgacgt cgcggcgttc
     2221 cgcacgaaca cgatcgaggc acagcgccgc gtgaccgagc tgatccgcca aggcatgacg
     2281 gtcgagcagg tcgtcgccgc gaacccgacc gcggacctcg gggcgaagtt tgcgacgagc
     2341 ggcccgccgc cggacgaggc ggcgacgcag cgcttcctga ccgggttcta caacgcgctg
     2401 aagagcgagc tctgatcgcg gtcgaaagcg cttgagccgg ccgcacgtac tgatctaccg
     2461 gccggtcgac gacagcggag gctcgcaccg cctcatcgag gcggccggct gcacggtggt
     2521 cgtggcaccg gccgatgcgg accgcg
//
LOCUS       DATCUD010000694         2393 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70884, whole genome shotgun sequence.
ACCESSION   DATCUD010000694 DATCUD010000000
VERSION     DATCUD010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70884"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     regulatory      complement(72..169)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01051"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cyclic di-GMP riboswitch class I; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="cyclic di-GMP"
                     /db_xref="RFAM:RF01051"
     gene            281..>2393
                     /locus_tag="VIQ99_10115"
     CDS             281..>2393
                     /locus_tag="VIQ99_10115"
                     /inference="COORDINATES: protein motif:HMM:NF013100.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY9183545.1"
                     /translation="MVLVGVLIGGYYYVAPSLPQAAELRTIEIQRPLQVFSRDGRLLA
                     EFGEMKRTPVDYEDIPPLLIKAILAAEDEHFFEHPGVDYRGVIRGALNELRSSGSDVG
                     GSTITQQVTRTLNVLTRAGLSSGLQRFVNKFKEWILAFRIEREFTKEEILELYLNTYF
                     FGQRSYGVATAAQTYFGKTLDQLTISEIAILAGIPQRPNDLNPFASPERAAARRSYVL
                     RRMEETRAITAAEHQAALAEPVVGRSYAAQTQLNAPYVAEMVARFGQAAYTAGLRVTT
                     TVDSRLQAAANRAIRETLMAYDERHGYRGPLATVTLPGAESGAPLNTTELDPAPLRAL
                     LDDHPVLLDYEPAIVLTAGDVEGRVFFAAHGVQTIDMTAVGWAAPFVHDDLVGDKPTT
                     VAEVLHPGDIVRFRRTAEGGWRLAQIPEVQGAFASIDPLDGAVVALTGGFDFFLSNFN
                     RATQAKRQPGSSFKPFVYSAAFENGFTPATVVNDAPPDVGYQATLERVWRPENFGGKY
                     YGPSRLREALKESMNAVSIRILQSMGVPRAVEHVKRFGFDDVAVPANLSLALGAGGVA
                     PLNLAAGYGAFANGGFKVTPYFIDRVTMQDGTLLYAAQPLICSECNSPPETEVPLEPE
                     IPELVDHVAELFPAQRAAPRAISPQNAYLISDLLQDVVRRGTGNAARRELMRDDLAGK
                     TGTTNDGRDTWFVGFNGNVVAA"
BASE COUNT          404 a          757 c          811 g          421 t
ORIGIN      
        1 cgggtggttc gcgggggaaa agctggcgac gcgacctgcg cgccctggac ggggtctgct
       61 cgctcgatcg cttcggcagc cccgctatcc taggtccggc gcccctcgcc gtgcccgtag
      121 accggaggct ttgcgtcccc atctttcgat gggtttgccc taacgccgcg gactatgcac
      181 aaaggcccaa tgtctggcaa gggcgtagaa tgcatcttcg cagatgaaac cttacgcgcg
      241 gattttgctg acaattctgg ccgcggggac cgccctcctg gtggtgctgg tcggtgtgtt
      301 gatcggcggc tattactacg tggcgccgag cctgccgcag gccgccgagc tgcgcacgat
      361 cgagatccag cgaccgctgc aggtttttag ccgcgacggt cgcttgctcg ccgagttcgg
      421 cgagatgaag cgcacgccgg tcgactacga ggacattccg ccgctcttga tcaaggcgat
      481 tctcgcggcc gaagacgagc actttttcga gcacccgggc gtcgactatc gcggcgtgat
      541 tcgtggcgcg ttgaacgagc tgcgatcgag cggcagcgat gtcggcggta gcacgatcac
      601 gcaacaggtc acgcgcacgc tgaatgtcct cacgcgagcg gggttgagct ccggtctcca
      661 gaggttcgtg aacaagttca aggagtggat tctcgcgttc cggatcgagc gcgagttcac
      721 gaaggaagag atcctcgagc tctacctgaa cacgtatttc ttcggccaac gctcctacgg
      781 cgtggcgacc gcggcgcaaa cctacttcgg caagacgctc gatcagctca cgatctcgga
      841 gatcgcaatc ttggccggca ttccgcagcg tccgaacgat ctgaatccgt tcgcgagccc
      901 ggagcgggcc gctgcacgcc gcagctacgt gctgcggcgc atggaagaga cgcgcgcgat
      961 cacggctgcc gagcaccagg ccgcgctggc ggagcctgtc gtcggcagaa gttacgcggc
     1021 gcaaacacag ctcaacgcgc cttacgtggc cgagatggtc gcgcgtttcg ggcaagcggc
     1081 ctacacggcg gggctccggg tgacgacgac cgtcgacagc cgactacagg cggcggccaa
     1141 tcgcgcgatt cgcgagacgt tgatggcgta cgacgaacgg cacggctacc gcggtccgct
     1201 cgcgaccgtg acgctgccgg gcgcggagtc cggtgcgccg ctgaatacga ccgagctcga
     1261 tcccgcgccg ctgcgcgcgc tgctcgacga tcacccagtg ttgctcgact acgagcccgc
     1321 gatcgtgctg acggccggcg acgtcgaggg gcgagtgttc ttcgcggcgc acggcgtgca
     1381 aaccatcgac atgacggccg ttgggtgggc ggcgccgttc gtccacgacg acctcgtcgg
     1441 agacaagccg accacggtcg ccgaagtgct ccatcccgga gacatcgtgc gtttccggcg
     1501 cacggccgaa ggcggttggc ggctggcgca aatcccggag gtgcagggcg cgttcgcatc
     1561 gatcgatccg ctcgatggtg cggtcgtggc gctcacgggc ggattcgact tcttcttgag
     1621 caatttcaac cgcgcaacgc aagcgaagcg tcaaccggga tcgtcgttca agccgttcgt
     1681 gtactcggcg gcgttcgaga acgggttcac tccggccacg gtggtcaacg acgcgccgcc
     1741 cgacgtcggt taccaggcga cgctcgagcg cgtctggcgc cccgagaatt ttggcggcaa
     1801 gtactacggg ccgtcgcggc tgcgcgaagc gttgaaggaa tcgatgaatg cggtttcgat
     1861 tcggatactg cagagcatgg gcgtgcctcg agccgtcgag catgtgaaac gtttcggctt
     1921 cgacgacgtc gccgtgccgg cgaacttgtc gctcgcgctc ggcgcgggcg gcgtcgcgcc
     1981 gctgaatctc gcggccggct acggggcgtt cgcgaacggc gggttcaagg tcacgccgta
     2041 cttcatcgac cgtgtgacga tgcaggatgg cacgttgttg tatgccgcgc agccgttgat
     2101 ctgcagcgaa tgtaacagcc cgccggagac cgaggtcccg ctcgagcccg agatacccga
     2161 gctcgtcgac catgttgcgg agctctttcc ggcacaacgt gcggcgccgc gagcgatctc
     2221 cccgcagaac gcctatttga tctccgacct gctgcaagac gtcgtgcggc gtggcacggg
     2281 caatgccgcg cgccgcgagc tgatgcgtga cgatttggcc ggcaagaccg gcaccacgaa
     2341 tgacgggcgt gatacgtggt tcgtaggctt caacggcaac gtcgtggcgg cgg
//
LOCUS       DATCUD010000695         2543 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63108, whole genome shotgun sequence.
ACCESSION   DATCUD010000695 DATCUD010000000
VERSION     DATCUD010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63108"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..285)
                     /locus_tag="VIQ99_10120"
     CDS             complement(<1..285)
                     /locus_tag="VIQ99_10120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183546.1"
                     /translation="MSAHAALADAQLNLGFESTAESGELPVGWTLQGAADAAVVAADS
                     AVAAEGERSLRIERTGAAGATRMAQRLAATSLAAAAGSARRVQLSGYVRLA"
     gene            complement(341..2467)
                     /gene="mdoH"
                     /locus_tag="VIQ99_10125"
     CDS             complement(341..2467)
                     /gene="mdoH"
                     /locus_tag="VIQ99_10125"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF003958.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HEY9183547.1"
                     /translation="MTTRYTTSVPPFAELAMPAQSFRQYTRERRRRWPTFRVLLGRLV
                     TFGGAAALTVYASREMIAVVSVGGVSALQWAMVALFAVTFAWIALTAAAAVAGVFFGG
                     VRKRAKTDQRVDGLTALVMPIYNEEPSGTFAALQAMAEALVERDTAAGFEIFVLSDTN
                     NPDIYVKETAAYHVLREKLGDRVRIWYRRRADNVGRKVGNLEDFIKRWGARYDFMIVL
                     DADSIFAPETLETLVREMAADESLGLLQTSPRLVGGRTLFARLQQFAGRVYGPIVARG
                     IAAWQGDDGNYWGHNAIIRVRAFASAAGLPVLPGRKPFGGAILSHDFVEAALLRRAGW
                     AVRMLPTEKGTWEDGPPSLLDSAARDRRWAQGNIQHLAVILSRGFAWPNRVHMAIGVM
                     SYLASPLWFALIVVGLGTAGHIATVQFEYFTDEMALFPRWPLFDTERMIELFVLAMIT
                     LLLPKILGVLRAFFDGELLRTVNPLRVVLGAVTETILSALYAPIMMMMQIRQVSEIFW
                     GQDSGWATQSRKHSRTPWGLLLRRHWLQTLAGIVVAAVLLYVSPPLFLWMSPALLGLV
                     CALPLSAASGSTVLAKVTRFLGLLTVPEEVAVPRVIALRDEAEARLEALLEGVTIERL
                     LADELARQRHFAAVLPRPPATRGHPDVMFITARAKLADAETVTEALGWLSPPERLAVL
                     GDRDLFHALVRLVSPNVPDRPALRSA"
BASE COUNT          465 a          901 c          823 g          354 t
ORIGIN      
        1 agcgagtcgg acgtatcccg acaactgcac gcgcctcgcg ctgcccgcgg cggccgcgag
       61 gctcgttgcc gcaagccttt gagccatgcg cgtggcgccg gcagcgcctg tccgctcgat
      121 ccgcaagctg cgctcgcctt ccgcggcgac cgccgaatcg gccgcgacga cggcagcgtc
      181 cgcggcgcct tggagggtcc agccgacggg tagctcgccg gactccgcgg tggactcgaa
      241 tccgaggttc agttgcgcgt ctgcgagcgc cgcgtgcgcg gacatcgcga agccgagcga
      301 gcgcacggcg agggcaaaaa acggcgtcga gcgcgacggc ttaagccgac cgcagcgccg
      361 gccgatcggg gacattcggg ctcaccaacc gaacgagcgc atggaacaag tcgcgatcgc
      421 cgagcacggc caaccgctcg ggcggcgaaa gccacccgag cgcctcggtg acggtctcgg
      481 catcggcgag cttggctcgc gccgtgatga acatgacgtc gggatgaccg cgcgtcgcag
      541 gcggccgcgg tagcacggct gcgaagtgcc gctggcgcgc cagctcatcg gccaacagcc
      601 gctcgatcgt cacgccctcg agcagcgcct cgaggcgggc ttcggcctcg tcgcgcagcg
      661 cgatcacacg cggcacggca acctcctccg gcaccgtcag caagcccaag aagcgggtca
      721 ccttcgcgag cactgtgctg ccgcttgccg ccgacagcgg cagcgcgcac acgaggccca
      781 agagggccgg cgacatccac agaaacaacg gcggcgaaac gtagagcaac acggccgcga
      841 cgacgatgcc ggccagagtc tggagccagt gcctccgtaa cagcaggccc caaggcgttc
      901 gcgagtgctt gcggctctgc gtcgcccacc ccgaatcctg accccagaag atctccgaga
      961 cttgccggat ctgcatcatc atcatgatcg gcgcatacag cgccgagagg atcgtctcgg
     1021 tcaccgcgcc gagcacgacg cgcagtggat tcacggtccg cagcagctcg ccatcgaaga
     1081 acgcgcgcaa tacgccgagg atcttcggca gcagcagcgt gatcatcgcg agcacgaaca
     1141 actcgatcat gcgctcggta tcgaacaacg gccaacgcgg gaacagcgcc atctcgtcgg
     1201 tgaagtactc gaactgcacg gtcgcgatgt gtccggccgt gcctaggccc acgacgatca
     1261 acgcgaacca cagcggcgag gcgagatagc tcatgacgcc gatcgccatg tggacgcgat
     1321 tcggccacgc gaaacccctg ctcaagatca ccgcgaggtg ctggatattg ccctgcgccc
     1381 agcgccgatc gcgggcggcc gagtcgagta gcgacggcgg gccgtcttcc caggtcccct
     1441 tttccgtcgg caacatgcgc acggcccagc cggcgcggcg caacaatgcc gcctcgacga
     1501 agtcgtgcga gagaatcgcg ccgccgaacg gtttcctgcc gggcagcacc ggcagccccg
     1561 cggcagacgc gaacgcgcgg acgcggatga tggcgttgtg gccccaataa ttgccgtcat
     1621 cgccctgcca agccgcgatg ccgcgcgcga cgatcgggcc gtacacgcgt ccggcgaact
     1681 gctgcaatcg tgcgaacagc gtccgcccgc ccacgagtcg cggcgacgtt tgcagcaacc
     1741 cgaggctctc gtcggctgcc atctcgcgca cgagcgtctc gagcgtttcg ggcgcgaaga
     1801 tgctgtccgc gtcgagcacg atcatgaagt cgtagcgcgc accccaacgc ttgatgaagt
     1861 cctcgaggtt gccgactttg cggcccacgt tatcggcgcg ccgccggtac cagatacgca
     1921 cccggtcgcc gagcttctcg cgcagcacgt gataggccgc ggtctccttg acgtagatgt
     1981 cgggattgtt cgtgtccgac agcacgaaaa tctcgaagcc cgctgccgtg tcgcgctcga
     2041 cgagcgcttc ggccatcgcc tgcagcgcgg cgaaggtccc cgacggttcc tcgttgtaga
     2101 tcggcatcac gagcgccgtg agcccgtcga cgcgttgatc ggtcttcgcg cgcttacgca
     2161 cgccaccgaa gaaaacacct gcgacggccg cagctgctgt cagagcgatc catgcgaacg
     2221 tgacggcgaa cagcgcgacc atcgcccact gcagcgctga gacgccgccg acggacacga
     2281 cggcgatcat ctcgcggctc gcgtaaaccg tcagcgcagc ggctccgcca aacgtcacga
     2341 gccgaccgag caatacgcgg aacgtcggcc agcggcgccg gcgctcccgc gtgtactgcc
     2401 ggaagctctg agccggcatc gccaactcgg cgaacggcgg caccgaggtc gtgtagcgcg
     2461 tcgtcatcgg ctccaccggt acagccaggt ttcactccac ggcttgtcgt tcgagtgcag
     2521 ggtcacgcgc aactccacga tgc
//
LOCUS       DATCUD010000696         1844 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_77964, whole genome shotgun sequence.
ACCESSION   DATCUD010000696 DATCUD010000000
VERSION     DATCUD010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_77964"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VIQ99_10130"
     CDS             complement(<1..360)
                     /locus_tag="VIQ99_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183548.1"
                     /translation="MKRIALFGSLLCSLVPTALLAQAVEGGSQMSYSAFDVSYLVDVE
                     IDGPGSVDGDGLELGGSYEITEKFYLFGAWQEQSFDFGIDGRQLELGGGFHTPLSNTV
                     DFVATLSYLDAEVQTNNF"
     gene            complement(508..>1844)
                     /locus_tag="VIQ99_10135"
     CDS             complement(508..>1844)
                     /locus_tag="VIQ99_10135"
                     /inference="COORDINATES: protein motif:HMM:NF013283.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="BamA/TamA family outer membrane protein"
                     /protein_id="HEY9183549.1"
                     /translation="DFTRITETFTFGYEATMAAADQLLALALAPAEYQAHRDARPNPR
                     REEPPRIDFVRLANDTNVSDNIVEARLESIPTGVPLDLDATELAIERVYGLELFQKVS
                     YDVVEEGDLTGLEVNLDAKEWGPNYLEAGLRFSSAGDDTTMFGVSMSYVRTAMNSLGA
                     EWRSTLAVGDEPSASTIWHQPLGWNALTFVSAGLHVDVPLINIYQDTARIAQLQETES
                     LIDLAIGREFGTWGELRFGVTRGKGDWEVVTGPGTTLIPEQFDRGELWTRFSVDTLDN
                     LYFPIGGGLFSAEWRSSREDFGADPEFDQFSGAFVGAKTFGRHTVAAGVRYDTTRDGT
                     APPQNLFEIGGFWKLSGFVEDELTGQHAGRLLAAYYRRIGNFGRMPAYAGITLERGNA
                     WDLPEDISWDNSLTAGSLWVGADTPIGPMYLAYGHAEGNRQSFYIFLGSVFH"
BASE COUNT          324 a          597 c          590 g          333 t
ORIGIN      
        1 gaagttgttg gtctggacct ctgcgtccag gtacgaaagc gtcgcgacga agtccacggt
       61 gttgctgagc ggcgtgtgga acccgccgcc gagctcgagc tgacggccgt cgatgccgaa
      121 gtcgaagctc tgctcttgcc acgcgccgaa caggtaaaac ttctcggtga tctcatacga
      181 gccgccgagc tcgaggccgt ctccgtcgac gctaccggga ccgtcgatct cgacgtcgac
      241 gaggtagctg acgtcgaagg cgctgtagct catctgcgag ccgccttcca ccgcctgcgc
      301 cagcagcgca gtcggaacca gtgagcagag cagcgagcca aacaatgcaa tccgtttcat
      361 gtcgatctcc ctcggatagg tggtgcgcgg ccgcatcgta gggggtccgc cccggaaaaa
      421 agtgaggccc gcgtcacaac tccaacgtcg tggcgccgac gccaacgcgg agtatgacgg
      481 ccgtcgcccg atgccaggaa actgttgtca atggaagaca ctaccgagga agatgtagaa
      541 gctctgccga ttgccttcgg cgtggccgta cgcgagatac atgggtccta ttggagtgtc
      601 ggctccgacc cacagcgatc ccgcggtcag cgagttgtcc cacgagatgt cttccggaag
      661 gtcccaggcg ttgccgcgct cgagcgtgat gcctgcatac gcgggcatcc gcccgaagtt
      721 gccgatgcgc cgataatagg ccgcaagcaa ccggcccgcg tgctgtcccg tgagctcatc
      781 ctcgacgaat ccggacagtt tccagaaacc gccgatctcg aacaggttct gcggcggcgc
      841 cgtgccgtcc ctcgttgtgt cgtagcgaac gccggcggcc acggtgtggc gcccgaatgt
      901 cttcgcgccg acgaacgcgc cactgaactg atcgaactcg gggtcggcgc cgaagtcctc
      961 gcgcgacgac cgccattcgg cactgaagag cccgccgccg atcggaaaat acaggttgtc
     1021 gagcgtgtcg acgctgaagc gcgtccacag ctcgccgcgg tcgaactgct cgggaatcag
     1081 cgtggtcccc ggccccgtga cgacttccca gtctcccttg cctcgtgtga ccccgaatcg
     1141 cagctcgccc caggtgccga actcgcggcc gattgcgaga tcgatcagcg attcggtttc
     1201 ctgcagctgc gcgatcctcg cggtgtcttg gtagatgttg atcagcggta cgtcgacatg
     1261 gagcccggct gacacgaacg ttagcgcgtt ccagccgagc ggctggtgcc aaatcgtcga
     1321 ggcggacggc tcgtcgccga ccgcgagcgt cgagcgccat tccgcgccga gcgagttcat
     1381 cgccgtgcgc acgtagctca tcgatacgcc gaacatcgtg gtgtcgtcac cggccgagct
     1441 gaatctgagg ccggcctcga gataattcgg accccattcc ttggcgtcga ggttcacctc
     1501 gaggccggtc aggtcgcctt cctcgacgac gtcgtagctg accttttgaa acagctcgag
     1561 cccatagacg cgctcgatcg cgagctcggt cgcatcgaga tcgagcggca cgccggtcgg
     1621 aatcgattcg aggcgcgctt cgacgatgtt gtcgctgacg ttcgtgtcgt tcgcgaggcg
     1681 cacgaagtcg atcctgggcg gctcctcgcg gcgcggattc ggccgcgcgt cgcgatgggc
     1741 ctggtactcg gccggcgcca atgcgagcgc aagcagctgg tccgcggccg ccatcgtcgc
     1801 ctcgtagccg aacgtgaagg tctcggtgat ccgtgtgaaa tctg
//
LOCUS       DATCUD010000697         3969 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_70899, whole genome shotgun sequence.
ACCESSION   DATCUD010000697 DATCUD010000000
VERSION     DATCUD010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3969
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70899"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /gene="serC"
                     /locus_tag="VIQ99_10140"
     CDS             complement(<1..837)
                     /gene="serC"
                     /locus_tag="VIQ99_10140"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007191128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEY9183550.1"
                     /translation="MKRVFNFSPGPAMLPESVLKRMQAELLDWRGSGMSVMEVSHRGT
                     DFIEFAAASERNLRELLGVPAHYKVLFLQGGATLQFAAVPLNIAPAGAVADYVVTGNW
                     GEKAVQEAERYIRVNVAANAKASKFTTIPDPRTWTLSKDAAYLHYTPNETVFGVEFHD
                     VPEVSDAPLVADMSSTLLSRPVDVSRFGIIYAGAQKNIGPAGLAMVIVREDLLGRARR
                     ETPGVIDYKTMADNDSMWNTPSTLSWYVAGLVFEWLKEQGGLQAMGKLSERKATKLYA
                     AID"
     gene            complement(856..3411)
                     /gene="gyrA"
                     /locus_tag="VIQ99_10145"
     CDS             complement(856..3411)
                     /gene="gyrA"
                     /locus_tag="VIQ99_10145"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020395490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEY9183551.1"
                     /translation="MAVGKEVLPVNLEDEMRQSYLDYAMSVIVGRALPDVRDGLKPVH
                     RRVLHAMRELGNDWNRAYKKSARVVGDVIGKYHPHGDVAVYDTIVRLAQPFSMRYLLI
                     DGQGNFGSVDGDAPAAMRYTEVRMARITQELLADIDKETVDFVPNYDESEREPSVLPT
                     RIPNLLVNGSSGIAVGMATNIPPHNLGEVIDACLALLANPEITLAEIIKLIPGPDFPT
                     AGLIYGIQGVVSAYSTGRGRIYVRGRTHIEPLGERGDRESIIITELPYQVNKARLIER
                     IAELVREKKIEGISELRDESDKDGMRVVIELKRGELSDVVLNNLFKQTPLQSVFGINM
                     VGLVDGQPKLLSLKELLEAFLRHRREVVTRRTLFDLRKARERAHILEGLMVALANIDE
                     IIALIKASSSPAEARTALCARPWRPGAVMGLLERAGADATRPEDLTEDSGLTDGRYRL
                     STAQAQAILDLRLHRLTGLEQDKISTEYSELISNIQNFLQILANPEKLQEVIRSELAE
                     VRAAYADKRRTEIVENYDDLTVEDLIPEETVVVTLSHAGYAKSQPAGVYQAQRRGGRG
                     RTAARVKDEDFIDQLFVANSHDTVLCFSSRGKAYWLKVYQVPQAAPGARGRPIVNLLP
                     LEEGERINAVLPVKAFEEDKFVFLATKLGTVKKTPLSAFARQRTNGIIAVELRDDDRL
                     IGAGITNGQQDIMLFASSGKAIRFAEQDVRPMGRTAAGVRGLRLGGPQDEVIALSIIG
                     AGPIVTATENGYGKLTPIEEHPVQGRGGQGVICIQTSERNGRLVGALQVSPEDELMLI
                     TSTGTLVRTPVAEISTMGRNTQGVRLIRLDESDRLVGISRVEAVPGDDISTSE"
     gene            3648..>3969
                     /locus_tag="VIQ99_10150"
     CDS             3648..>3969
                     /locus_tag="VIQ99_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012638098.1"
                     /note="Catalyzes the hydrolytic cleavage of a
                     carbon-halogen bond in N-ethylammeline; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRZ/ATZ family hydrolase"
                     /protein_id="HEY9183552.1"
                     /translation="MSIEPVDALICPRWTIRIEPRVVAEEGLALAIEAGRIVDVLPVA
                     EAERRYAPRVRHERPRHVLLPGLVNAHTHAAMALFRGFADDLPFEGWLRDRIWPAEAR
                     WVGPE"
BASE COUNT          676 a         1313 c         1225 g          755 t
ORIGIN      
        1 gtcgatggcc gcgtagagct tcgtcgcctt acgctcgctg agcttaccca tcgcctgaag
       61 accgccctgc tccttgagcc actcgaagac gaggccggcg acataccacg acagcgtcga
      121 cggcgtgttc cacatcgagt cgttgtcagc catcgtcttg taatcgatga ctcccggagt
      181 ctcgcgacgc gcccggccga gcaggtcctc acgaacgatc accatcgcga gacccgcggg
      241 gccgatgttc ttctgcgctc ccgcatagat gatgccgaac cgactgacgt cgaccggccg
      301 cgacaacagc gtcgacgaca tgtcagccac gagcggcgca tccgacactt ccggcacgtc
      361 gtggaattcg acgccgaata ccgtctcgtt cggcgtgtag tgtagatagg ccgcgtcctt
      421 cgacagggtc cacgtgcgcg ggtccggaat cgtcgtgaac ttgctggcct tggcgttcgc
      481 ggcgacgttc acgcgaatgt agcgttccgc ctcctggacg gccttctcac cccagttgcc
      541 cgtgacgacg tagtccgcga cggcgccggc gggagcgatg ttcagcggta ccgccgcgaa
      601 ctgcagcgtg gcaccgcctt ggaggaacag caccttgtag tgagcgggca cgccgaggag
      661 ctcacgcaag ttgcgctccg acgcggcggc gaactcgatg aaatccgtgc cgcgatggct
      721 cacttccatg acggacatgc cgctgcctcg ccagtccaac agctcggctt gcatgcgctt
      781 gaggaccgac tccggcagca tcgccggacc ggggctgaag ttgaatacgc gcttcatggg
      841 gagggtctcc gtaccctatt cggaggtcga gatgtcatcg ccgggcaccg cctcgacgcg
      901 agagatgccg acgaggcggt cgctttcgtc taggcggatc agccgcacgc cctgggtgtt
      961 tcgtcccatc gtcgaaatct cggcgaccgg cgttcgcacg agcgtgccgg tcgaggtgat
     1021 cagcatgagc tcgtcttcag gcgagacctg gagcgcgccg acgagccggc cgttgcgttc
     1081 gcttgtttga atgcagatca cgccttggcc gccgcggcct tgcacgggat gttcctcgat
     1141 gggcgtcagc ttgccgtagc cattctcggt ggccgtcacg atcggccctg caccgatgat
     1201 gctgagcgcg atgacttcgt cttgcggacc gccgaggcga agcccgcgga caccggctgc
     1261 cgtacggccc atcgggcgca catcttgctc cgcgaatcgg atcgccttgc ccgagctcgc
     1321 gaacaacatg atgtcttgct ggccattcgt gatgccggca ccgatcaggc gatcgtcgtc
     1381 gcgcagctcg accgcaatga tgccgttcgt gcgctgccgc gcgaacgccg agagcggcgt
     1441 cttcttcacc gtcccgagct tcgtggcgag gaacacgaac ttgtcttcct cgaacgcctt
     1501 cacgggtaac acggcgttga tgcgctcgcc ttcctcgagc ggcagcaggt tcacgattgg
     1561 acggccgcgt gccccgggcg ccgcttgcgg cacctggtag accttcagcc aatacgcttt
     1621 accgcggctc gagaagcaca gcaccgtgtc atgcgaattc gcgacgaaca actggtcgat
     1681 gaagtcttcg tccttgacgc gagcagccgt acgaccgcga ccgccgcgcc gctgagcctg
     1741 gtagacgccg gccggttgcg acttcgcgta gcccgcgtgc gacagcgtca cgacgaccgt
     1801 ctcttccggg atcaggtcct cgaccgtgag gtcgtcgtag ttctcgacga tctcggtacg
     1861 gcgcttgtcc gcgtatgcag cacggacctc cgcgagctcg ctgcggatga cttcctgtag
     1921 cttttcgggg ttcgcgagaa tctgcagaaa attctgaata ttgctgatca actcgctgta
     1981 ttcagtagag atcttgtcct gctccaaccc ggttagacga tgcaggcgca gatccaagat
     2041 cgcttgcgct tgggccgtcg acaaacggta acggccgtcc gtgaggcccg aatcctccgt
     2101 cagatcttcg ggccgagtag catcggcgcc ggcacgttcg agcaagccca tcacggcgcc
     2161 ggggcgccac ggtcgcgcgc acaaggccgt tcgcgcctcg gccggcgagc tcgacgcctt
     2221 gatcagcgcg atgatctcgt cgatgttcgc gagggccacc atcaggcctt ccaagatgtg
     2281 cgcccgctcg cgcgcctttc gcaagtcgaa tagcgtgcgg cgtgtcacca cctcgcgcct
     2341 atggcgcaag aacgcttcga gcaactcctt cagcgacaat agcttcggct ggccgtcgac
     2401 gagcccgacc atgttgatgc cgaacacgct ttgcagcggc gtctgcttga acaggttgtt
     2461 cagcaccacg tccgacagct cgccgcgctt gagctcgatg accacgcgca tgccgtcctt
     2521 gtcggactcg tcgcgcagct cgctgatgcc ttcgatcttc ttttcccgga ccagctctgc
     2581 gatgcgctcg atcaggcgtg ccttgttcac ctgatacggc agttcagtga tgatgatcga
     2641 ctcgcgatcg ccgcgttcgc cgagcggctc gatgtgcgtt cgtccgcgca catagattcg
     2701 gccgcgcccc gtgctatacg cgctgacgac gccttgaatg ccgtagatca accccgcggt
     2761 cgggaagtcc ggtccgggga tcagcttgat gatctcggcg agcgtgatct cgggattcgc
     2821 gagcaacgcc aggcaggcgt cgatgacttc gcccaagttg tgcggcggga tgttcgtcgc
     2881 catgccgacc gcgatgcccg aggagccgtt gacgagcagg ttcgggatcc gcgtcggcaa
     2941 gaccgagggc tcgcgctcgc tctcgtcgta gttcgggacg aaatcgacgg tttccttgtc
     3001 gatgtccgcg agcagctcct gcgtgatccg cgccatgcgg acctcggtgt agcgcatggc
     3061 tgcaggcgca tcgccgtcga ccgatccgaa gttgccctgg ccgtcgatca acagatagcg
     3121 catcgaaaac ggctgcgcga gccgcacgat cgtgtcgtag accgctacgt cgccgtgggg
     3181 atggtatttg ccgatgacgt cgccgacgac acgcgcggac ttcttgtaag cccgattcca
     3241 gtcgttgccg agctctcgca tcgcatggag cacccgccga tgcacgggtt tcaatccatc
     3301 ccgaacatcc ggaagcgctc gacccacgat cacgctcatc gcgtaatcga ggtacgactg
     3361 ccgcatctcg tcttcgagat tgaccgggag gacttcctta cctactgcca tcagttgcgc
     3421 tcaaaatagg gccccgccct ccacccgccc gcgtcggcgc ggaggggacc agaaatcgac
     3481 gaggtgtaag gtcgaccggg caacgccgct gatcattcat gcggctatcg catcgcccca
     3541 agtgcccaaa aaacaagggc aaagtttagc acagagacag ttctggccgt agcgccgacg
     3601 cgccgatcgg acgctatact tgctcgcctt tttgcgagca cccaatcttg tcgatcgaac
     3661 ccgtcgacgc tctgatttgt ccgcgttgga ccatccgtat cgagccccgc gtggtcgccg
     3721 aggaaggcct cgcgctcgcc atcgaggcgg gacgtatcgt cgacgtgctg ccagtcgccg
     3781 aagccgaacg tcggtacgcg ccacgcgtcc ggcacgagcg accccgacac gtgctgctgc
     3841 ctggcctcgt caacgctcac acgcacgccg cgatggcgct ctttcggggg ttcgcggacg
     3901 acctaccctt cgagggctgg ctgcgcgacc ggatctggcc cgcggaggcg cgatgggtag
     3961 ggcccgaat
//
LOCUS       DATCUD010000698         2773 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99305, whole genome shotgun sequence.
ACCESSION   DATCUD010000698 DATCUD010000000
VERSION     DATCUD010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2773
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99305"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..723)
                     /locus_tag="VIQ99_10155"
     CDS             complement(151..723)
                     /locus_tag="VIQ99_10155"
                     /inference="COORDINATES: protein motif:HMM:NF025692.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEY9183553.1"
                     /translation="MTSWLAAGAVAQNLVAEPPPVPVENDPGFFEIRAAHAELRYGVY
                     FLSAVISYRLSTEARDALHAGVPLVIRMDVEVIHPRRWWFDNDGGSLLQSYQLEYHAL
                     SERYIVQYLNTGEQASFRSLVAALDALGRVDGLPLIDSALLEEGRTYDVRLRVSLDQE
                     QFPGPLRLLAFWRRDWSIASEWYRWRLQSE"
     gene            complement(782..2143)
                     /gene="rsmB"
                     /locus_tag="VIQ99_10160"
     CDS             complement(782..2143)
                     /gene="rsmB"
                     /locus_tag="VIQ99_10160"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020159291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEY9183554.1"
                     /translation="MPRIHSTELHLHPERAPAGAKVRAVAAELVARVIDERIAVDDLL
                     PARGIAARDQPLLAALVYGALRWHHRLEWQCGRLLTRPLQKSETELAALLRIGILQLE
                     ELRIPAHAAVSATVDAVTLLGSRHAAGLVNAVLRRFQREREQLTRAEAQPLEARFSHP
                     QWIIEALRRDYPQHWAAILDANNAPPPMWLRVNALRTTRAEYLAKLEQSGMKGTAGDV
                     DSAVRLEEPVTVAALPGFAAGEVSVQDLSAQRAAQLLDLKAGQRVLDACAAPGGKTGH
                     ILEIAAGQCEVWAVERDPARLTMVRENLERLGVSARLVAGDATAPKDWWDGTPFDRIL
                     LDAPCSALGVIRRHPDIKLLRRPADVDRVVALQAKMLGALWPLVAPGGLLLYATCTLL
                     KRENDQQIEAFRSLEPTIDPEPTSTTRCQLLTGEAEGDGFYYAWLRKPHVSRTLSGVS
                     PQP"
     gene            complement(2103..>2773)
                     /locus_tag="VIQ99_10165"
     CDS             complement(2103..>2773)
                     /locus_tag="VIQ99_10165"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY9183555.1"
                     /translation="LLPRALLDWPRRGCINLHASILPRWRGAAPIQRALLAGDPTTGI
                     SVMQMEAGLDTGPVHLTRSIAIGPHETAGELHDRLAVLAAEALLAALPGVLDGTSIPT
                     PQRDDLATTAPKIAKAEAALDWRVPAVELERRVRAFNPWPVAEARLADGRRLRVWDAS
                     VVADAAAAVPPGTILIADRAGIDVATGRGVLRLRKIQPPSARVMDVEAYLAAHSLDGA
                     AFAP"
BASE COUNT          486 a          943 c          906 g          438 t
ORIGIN      
        1 gcacgccgat accgacggag ttgatcagca cgatccagtc ttggcgtttg gcgaagtcgt
       61 cggtgttttc ggtgacctgc gtgaacagca gcaacgcgac gaaccacagt aggatcccga
      121 ctgcggcgag caatccgagc agcgtctttc ttattcgctt tgcaaccgcc accgatacca
      181 ctcgctagcg atcgaccagt ctcggcgcca aaaagccagc aaccgcaacg ggccggggaa
      241 ctgttcctga tccaaggaca cgcgcaaacg gacgtcgtag gtgcgccctt cctcgagcag
      301 ggccgaatcg atcaacggca ggccgtcgac tcggcctaga gcgtcgagag cggcgaccaa
      361 cgaccgaaac gacgcctgct cgccggtatt caaatactgc acgatgtacc gctcgctgag
      421 cgcgtggtac tcgagctgat acgactgcag cagtgagccg ccgtcgttgt cgaaccacca
      481 acgccgcggg tggatgactt cgacgtccat ccgaatcacg aggggcactc ccgcatgcaa
      541 ggcgtcacgc gcctcggtcg ataggcgata cgagatcacg gcgctcaaaa agtagacgcc
      601 gtagcgaagc tcggcatggg cggcccgaat ctcgaagaag ccgggatcgt tctcgactgg
      661 gacgggcggc ggctctgcta cgaggttttg cgcgacggca cccgcggcca gccatgacgt
      721 caccgtcaag atacacgccc acgacaggag acgcagcgtc gttaccgccg tcgcaggtgg
      781 actatggttg aggtgagact ccactgagcg ttcgcgacac gtgcggcttc cgtaaccaag
      841 cataatagaa gccgtcgccc tccgcctctc cggtcaatag ctgacaccgc gtcgtgctcg
      901 tgggttccgg gtcgatcgtc ggctccaggc ttcgaaatgc ttcgatctgt tgatcgttct
      961 cgcgcttcag cagcgtacat gtggcgtaaa ggagcaagcc gcccggagcg acgagcggcc
     1021 atagagcccc gagcatcttc gcctgcagcg ccacgacgcg atcgacatcg gcgggtcgcc
     1081 gcagcagctt gatgtcgggg tgacggcgaa tgacgccgag cgcgctacac ggagcgtcga
     1141 gcagtatccg gtcgaaaggc gtgccgtccc accagtcctt cggcgccgtc gcatcgcccg
     1201 caacgagccg cgcggacacg ccgagccgtt cgagattctc gcggaccatc gtaaggcggg
     1261 ccggatctcg ctcgacggcc cagacctcgc actggcccgc tgcgatctcg aggatgtgcc
     1321 ccgtttttcc gcccggagcg gcgcacgcgt ccagcacgcg ttggccggcc ttcaagtcga
     1381 gcagctgcgc ggcccgttgc gcggacagat cttgaaccga aacctctccg gccgcgaacc
     1441 ccggcagcgc ggcgacggtc acgggctcct cgagtcggac ggccgagtcg acgtcgccgg
     1501 ctgtgccttt catgccgctt tgctcgagct tcgcgagata ctcggcccgt gtcgtacgca
     1561 gcgcgttcac gcgcaaccac atcggcggcg gcgcgttgtt cgcgtcgagg atcgcggccc
     1621 aatgctgcgg atagtcgcgg cgcagtgctt cgatgatcca ctgcgggtgt gagaatcgcg
     1681 cctcgagcgg ctgcgcttcg gcgcgcgtca gttgctcgcg ttcgcgttgg aatcgacgca
     1741 gcacggcgtt cacgaggccg gccgcgtgcc gtgacccgag caacgtgacc gcgtcgaccg
     1801 tcgcagacac ggcggcgtgc gccgggatcc gcagctcctc gagctgcaga attccgatcc
     1861 tgagcagcgc ggcgagctcg gtctcgcttt tttgcagcgg gcgcgtcagc agccggccgc
     1921 attgccactc gagccggtga tgccaacgca acgctccgta gacgagcgcg gccagcagcg
     1981 gttgatcgcg cgccgcgatg ccgcgcgccg gcaatagatc gtcgacggcg atgcgttcgt
     2041 cgatcacacg cgccacgagc tcggctgcga cggctcgcac tttcgcgccc gcgggcgcac
     2101 gctcagggtg caaatgcagc tccgtcgagt gaatgcgcgg caagataggc ctctacgtcc
     2161 atgaccctgg ccgacggcgg ctgaatcttg cggaggcgca gcacaccgcg ccccgtagcg
     2221 acgtcgatgc cggcacggtc cgcgatcagg atcgtgcccg gtggcacggc cgctgccgcg
     2281 tctgcgacga cagaagcatc ccacacgcgg agccgtcgac cgtcggcgag ccgggcctcc
     2341 gcaaccggcc aaggattgaa cgcacgcacg cgccgctcga gctcgacggc aggcacgcgc
     2401 caatccagcg cggcttctgc cttcgcgatc ttcggcgcgg tcgtcgcgag atcgtcgcgc
     2461 tgcggcgtcg ggatcgaggt gccgtccagc actcccggca acgccgcgag taacgcttcg
     2521 gccgcgagca cggcgagtcg atcgtgcagc tcgccggcgg tttcgtgcgg cccgatcgcg
     2581 atcgagcgcg tcaggtgcac gggtcccgta tcgagaccgg cctccatctg catgacgctg
     2641 atgcccgtcg tcggatcacc cgcgagcaac gcgcgctgga tcggcgcagc accacgccaa
     2701 cgcggcagga tcgaggcgtg cagattgatg caaccgcgtc gcggccagtc cagcaatgcc
     2761 cgcggcagca gca
//
LOCUS       DATCUD010000699         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105902, whole genome shotgun sequence.
ACCESSION   DATCUD010000699 DATCUD010000000
VERSION     DATCUD010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105902"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            128..1135
                     /locus_tag="VIQ99_10170"
     CDS             128..1135
                     /locus_tag="VIQ99_10170"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9183556.1"
                     /translation="MANLSRRGFVKASSLIAAAPALAAVTAAAQPPGPPPPPDIGNLR
                     AEKDIVFGKGGDMDLTLDVYHPPEGVTPKRMAIIHLFGGGFFAGNKGAGYIINDAKAL
                     GARGYTSISANYRLQSQGLWPAQIHDVKAAIRWTRANAARLGVEANRIAVAGYSAGGM
                     LALMAAGTNDKPEFEGSVGTPGVSSKVDACIGVYPLASAQIARGLFGEGGATPEAIAA
                     ASPTTYIGPNFAPTIFIHGTADTTVLPSSSIDFFNKLLAANVPTALTMIQGAAHAFDN
                     GAPDAVELMAQSIDLFLDRLFVNPKPYPSFGGGPRGERVGGRPGGSAAGAPGGQRPPG
                     Q"
     gene            complement(1181..>1792)
                     /locus_tag="VIQ99_10175"
     CDS             complement(1181..>1792)
                     /locus_tag="VIQ99_10175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183557.1"
                     /translation="EGTADITAIDAGAMNLAGFLTRGWDYEATLDFPLRAGGNLNLRL
                     IGTYLYDMIVDTGLGPAPIDYDGQSGPVASFGSFNTQPNWQARAFLTYARDRFTSTFE
                     TRYVGSGSLNVTYFESPPGDPSNTRPNSINDNSVDDAYYLSWSGSYDFRGSEGNQIQL
                     FWVINNLLDEDPPVAPGGNAYPTNPVFFDTLGLRYRAGVRIQF"
BASE COUNT          314 a          584 c          598 g          296 t
ORIGIN      
        1 ggctggctcg gcaaggtcga gagcccgcgc gcggaccggt gaagattgcc tgcgaccggt
       61 tcgttcgagc tcgaacgtag gtagtatcgg ctcttcgagt tgccacaacc tcagggggac
      121 aaagcaaatg gccaaccttt cgcgacgcgg attcgtcaaa gcatcgagcc tgattgccgc
      181 cgcaccggcg ctcgcggcgg tcacggccgc agcgcagccg ccggggccac cccccccgcc
      241 cgacatcggc aacttgcgag ccgagaaaga catcgtgttc ggcaagggcg gtgacatgga
      301 cttgacgctc gacgtctacc atccgcccga aggtgtcacg ccgaagcgca tggcgatcat
      361 tcacctgttc ggcggcggtt tcttcgccgg caacaagggt gccggctaca tcatcaacga
      421 tgcgaaggcg ctcggcgcgc gcggctacac gagcatctcc gcaaattacc ggttgcagag
      481 ccagggcttg tggccggcgc agattcacga cgtgaaggcc gcgatccgtt ggacgcgcgc
      541 gaatgcggcg cggctcggcg tcgaggccaa tcgcatcgcc gtcgccggtt actcggccgg
      601 cggcatgctc gcgctgatgg cggccggcac gaacgacaaa cccgagttcg agggcagcgt
      661 cggcacgccc ggcgtcagct cgaaggtcga cgcgtgcatc ggcgtttatc cgctcgcgag
      721 cgcacagatc gcgcgcgggc tgttcggcga aggtggagcg acgcccgaag ccatcgcggc
      781 cgcgtcgccg acgacctaca tcggcccgaa tttcgcgccg acgattttca tccacggcac
      841 ggccgatacg accgtgttgc catcgtcgag catcgacttc ttcaacaagc tgctcgcggc
      901 aaacgtgccg acggcgttga cgatgatcca gggcgccgcg cacgcgttcg acaacggcgc
      961 gccggatgcc gtcgagctga tggcgcagtc gatcgacttg tttctggacc ggctgttcgt
     1021 gaacccgaag ccgtatccgt cgttcggggg cggcccacgc ggcgagcgcg tcggcggtcg
     1081 acccggtggc agcgcggcgg gagcaccggg cggccagcgt ccgccaggcc aatagcaata
     1141 gttggcaacg cgctacacgg gagccgcggc ctgtgcatga tcagaactgg atgcgcaccc
     1201 ccgcgcggta gcgcaacccg agcgtgtcga agaacaccgg gttcgtcggg taagcgttgc
     1261 cgcccggcgc gacgggcgga tcttcgtcga gcaggttgtt gatgacccag aacagctgga
     1321 tctggttgcc ctccgacccc cggaaatcgt atgacccgga ccagctcagg taataggcat
     1381 cgtcgacgct gttgtcgttg atggagttcg gccgcgtgtt actgggatcg cccggcgggc
     1441 tctcgaagta cgtcacgttc agcgatcccg atccgacata tctcgtttcg aacgtgctcg
     1501 tgaaccgatc gcgcgcatac gtcaggaacg cccgcgcctg ccaattgggc tgtgtgttga
     1561 acgagccgaa cgaagcgacg ggaccgctct gcccgtcata atcgattggc gcggggccga
     1621 gacccgtgtc gacgatcatg tcgtagagat acgtcccaat gagccgcagg ttcaggttgc
     1681 cgcccgcgcg cagcgggaag tcgagagtcg cctcgtagtc ccagcctcgc gtcaggaacc
     1741 cggccaggtt catcgcgccc gcgtcgatgg ccgtgatgtc ggcggtcccc tc
//
LOCUS       DATCUD010000700         1951 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_84917, whole genome shotgun sequence.
ACCESSION   DATCUD010000700 DATCUD010000000
VERSION     DATCUD010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84917"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..819
                     /locus_tag="VIQ99_10180"
     CDS             <1..819
                     /locus_tag="VIQ99_10180"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: protein motif:HMM:TIGR00745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEY9183558.1"
                     /translation="RANGLRVDSVLGDMHVEPAVASANTSDVGPVDVVLLGVKTWQVP
                     EAARSLGPLLHRDTVIVPLQNGVETIDELVSTVGPQHVAGGVCGGFCFIVEPGRIRHI
                     GGVTFIKFGELDGRKSRRIEALRDTFVRASVDAAVPDDIQVAVWEKFLLVVPFGGVGA
                     ATRAPIGVLLTPPTRDLLARGMREIEAIGRARGIALPADTVERTLAILDGVTPSGTSS
                     LQRDIAAGKRSELDAWTGAVVRLGARAGVPTPLHDFLYATLLPQERRARGEVSF"
     gene            1016..1282
                     /locus_tag="VIQ99_10185"
     CDS             1016..1282
                     /locus_tag="VIQ99_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012279243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2282 domain-containing protein"
                     /protein_id="HEY9183559.1"
                     /translation="MQTKKALIGTAVGGLVALAQMALYAQPAPTPSFAAEKCYGIAKA
                     GKNDCAANGHACQGQAKVDSNAREWIYVPTGTCERIVGGSVAAK"
     gene            1287..>1951
                     /locus_tag="VIQ99_10190"
     CDS             1287..>1951
                     /locus_tag="VIQ99_10190"
                     /inference="COORDINATES: protein motif:HMM:NF003818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HEY9183560.1"
                     /translation="MRATPHPRIPGAPVPALAGIGLRSAHVLEFVTGDPAVPWLEVHS
                     ENYFAAAGAAHTALERIRPRYPVSFHGVGLSLGSADPLDRRHLRRLAELVRRYEPMLV
                     SEHLSWSSIGGRYVNDLLPLPATREALEHMVLRVDETQETLGRRILLENVTSYLPLAV
                     GEMPEHCFLTELVQRTGCGALLDVNNLYVNQQNHGASAAAFIGALPTDCVGEIHVAGH
                     SVH"
BASE COUNT          312 a          672 c          662 g          305 t
ORIGIN      
        1 cgcgccaacg gcctacgcgt cgacagcgtg ctcggcgaca tgcacgtcga gccggccgtc
       61 gcgagcgcca acacaagcga tgtgggcccc gtcgacgtcg tgctgctcgg cgtcaaaacg
      121 tggcaggtgc cggaggccgc acggtctctc ggcccgctgc tccatcgcga caccgtgatc
      181 gtgccgctgc aaaacggcgt cgaaacgatc gatgagctcg tgagcactgt tggcccgcaa
      241 cacgtcgcag gcggcgtgtg cggcgggttt tgcttcatcg tcgagccggg ccgcattcgc
      301 cacatcggcg gcgtcacgtt catcaagttc ggcgagctcg acggccgcaa gtcgcgacgt
      361 atcgaggcgt tacgcgatac gttcgttcgc gcaagcgtcg atgccgcggt gcccgacgac
      421 atccaagtcg cggtttggga aaaatttctg ctcgtcgtcc cgtttggcgg agtcggcgcc
      481 gcgactcgcg cgccgatcgg agtgctcctg acaccgccga cgcgcgacct gctggcgcgc
      541 ggcatgcgcg agatcgaggc gatcggccgc gcccgcggca tcgcgctgcc ggccgacacc
      601 gtcgaacgca cacttgcgat cctcgacggc gtcacgccga gcggcacgtc gtcgctgcag
      661 cgcgatatcg cggccggcaa acgctccgag ctcgacgcgt ggaccggagc cgtcgtgcgg
      721 ctcggtgcgc gcgcaggcgt gccgacaccg ctgcacgact ttctctacgc cacgttgctc
      781 ccgcaagaac gccgcgcgcg cggcgaggtt tcgttctagc gcagcgatcc caaccgccgc
      841 cgttcgcgga gccgcaacgg gccgcggccg cgccgcgaag ggttgcgccc cgcccaccgc
      901 ccgtaggcgg tcgaatcctt ggatatcaac gagttacgta gttggcattg cctttgcaaa
      961 aagggcggcg tgggcgcaag cccgttacgt ttcgaaccac caacggagga tacgcatgca
     1021 aacgaagaag gctctgatcg gcacggcggt cggcgggctc gtcgcgctcg cgcagatggc
     1081 gctttacgcg cagcccgcac cgacgccgag cttcgcggcc gagaagtgct acggcatcgc
     1141 gaaggccggc aagaacgact gcgccgcgaa cggccacgcg tgccagggcc aggccaaggt
     1201 cgacagcaac gctcgcgagt ggatctacgt gccgaccggc acgtgcgagc gcatcgtcgg
     1261 cggcagcgtc gcagccaagt aggacgatgc gcgcgacccc ccacccgcgc attcccggag
     1321 ctccggtccc ggccctggcc gggatcgggc ttcggtccgc ccacgtgctc gagttcgtga
     1381 ccggggaccc cgcggtcccg tggctcgagg tgcacagcga gaactacttc gcggccgccg
     1441 gcgcggcgca cacggctctg gagcgaatcc gaccgcgcta cccggtgtcg ttccacggcg
     1501 tcggcttgtc gctcggctcc gccgatccgc tggaccgcag acatctccgg cggctcgcag
     1561 agctcgtccg gcggtacgag ccgatgctgg tctcggagca tctgtcctgg agctcgatcg
     1621 gcgggcggta cgtgaacgat ttgctgccct tgccggcgac ccgcgaggcg ctcgagcaca
     1681 tggtgctgcg cgtcgacgag acgcaggaga cgctggggcg ccggatcctg ctcgagaacg
     1741 tcacgagtta tctgccgctg gcggttggcg agatgccgga acattgtttt ctcaccgagc
     1801 tcgtgcagcg cacgggctgc ggcgcgttgc tcgacgtcaa caacttgtac gtgaaccaac
     1861 aaaaccatgg cgcctcggcc gcggcgttca tcggggcatt gccaacagat tgcgtcggcg
     1921 agattcatgt cgcgggccat tccgtgcaca a
//
LOCUS       DATCUD010000701         1599 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42282, whole genome shotgun sequence.
ACCESSION   DATCUD010000701 DATCUD010000000
VERSION     DATCUD010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42282"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(194..853)
                     /locus_tag="VIQ99_10195"
     CDS             complement(194..853)
                     /locus_tag="VIQ99_10195"
                     /inference="COORDINATES: protein motif:HMM:TIGR04211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04211 family SH3 domain-containing protein"
                     /protein_id="HEY9183561.1"
                     /translation="MWVRWLSLGLLFVVVAGNAQTRYVTDRAVVELRRGPSTEYLILR
                     NLESGAEVQVLEQDESNGYSRVRVGDQGTEGWILTRFLTSEPIARERLSVAERNLATA
                     RQRVTELETEVSELSTELAATKTELEQTRGTHAATSQELADIRTAAANVVAIRDQNAS
                     LQQRLIQREREVEELTAANARLTSRNNQNWFVVGAAVLLGGIVIGLVAPSLRRRRRSD
                     W"
     gene            complement(939..1481)
                     /gene="orn"
                     /locus_tag="VIQ99_10200"
     CDS             complement(939..1481)
                     /gene="orn"
                     /locus_tag="VIQ99_10200"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004883550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEY9183562.1"
                     /translation="MNRKENLIWIDLEMTGLDPDQHKIIEIATVITDKELVVLAEGPV
                     LAIHQPDAVLAAMDEWNTRQHANSGLTERVRTSTVTVKDGERQTLEFIRQHVDQGASP
                     ICGNSICQDRRFLIRHMPELAAYFHYRNLDVSTLKILAKLWLPEVGNRFEKKSVHLAL
                     ADIHDSIRELRFYREHLFKR"
BASE COUNT          289 a          520 c          466 g          324 t
ORIGIN      
        1 gagccgacga cgagatcaga gcgtccgtcg cccactcgta gctggacgtc agcagcccga
       61 gcttgatgta gttactctcg taaagcgtca tcagtcccgt gaatgtgccg ggacgataga
      121 tgcactgcgg aatgatcaag ccgtcgacca acatgtcgtt acagtgtcct aaacatccgc
      181 tcgagacaac tgcctaccaa tcggagcgtc gcctgcggcg caggctcggc gctacgagcc
      241 cgattacgat tccgccgagc agcaccgccg caccgacgac gaaccagttc tgattgttgc
      301 ggctcgtgag acgcgcattg gccgccgtga gctcctcgac ctcgcgctcg cgttgaatca
      361 gccgttgttg gaggctcgcg ttctgatcgc ggattgcgac gacgttcgcg gcggccgtgc
      421 gaatgtccgc gagctcctgg ctcgtcgccg catgcgtgcc tcgagtctgc tcgagctcgg
      481 ttttcgtggc tgccaactcc gtcgagagct cgctgacctc ggtctcgagc tcggtgacgc
      541 gctgtcgcgc tgtggccagg ttgcgctcgg ctaccgacag ccgttcgcgc gcgatgggct
      601 cgctcgtcag gaaccgtgtc aggatccagc cctcggtgcc ctgatccccg accctcacgc
      661 gcgaatagcc attggactcg tcctgctcga gcacctgcac ttccgcgccc gactcgaggt
      721 ttcgcagaat caggtattcc gtgctcggcc cgcgccggag ctcgacgacc gcgcggtcgg
      781 tcacgtaacg cgtttgggcg ttgccggcaa ccaccacgaa caataatccc aagctaagcc
      841 atcgaaccca catcttgctc tcgcaaccgg gcgaccggtg ttcgagacta gcccatcgcc
      901 gggcacattg gaaaccgcgg cacgcgtttt gtgacgcgtc aacgcttgaa cagatgctcg
      961 cggtagaacc ttagctcacg aatcgaatcg tgaatgtcgg ccaaagccag gtggaccgat
     1021 ttcttctcga atcggttgcc gacctcaggc aaccacagct ttgcgagtat cttcagcgtc
     1081 gagacgtcca aattccggta gtgaaaatac gccgcgagct cgggcatgtg gcggatcaaa
     1141 aaacgtctgt cctgacagat gctgttcccg cagatcggcg aggcgccttg atcgacgtgc
     1201 tgccgaatga actccagagt ctgtctttcg ccatccttca cggtcacagt gctcgtccgc
     1261 acgcgttccg tgagccccga gttcgcgtgt tgtcgcgtgt tccattcgtc catcgccgcg
     1321 agcacggcat ccggttggtg gatcgcgagc acgggccctt ccgcgaggac cacgagctcc
     1381 ttgtccgtga tcaccgtggc gatctcgatg atcttgtgct gatcggggtc gagccccgtc
     1441 atctcgaggt cgatccagat cagattctct ttgcgattca aacgagctcc tgcgcgaacg
     1501 ctaacgtgac cgcgtcatcc caaggtgccc ttgagcgggc ggccaccgag cacgtgcagg
     1561 tgcgcatgga acacgacctg accgccttcg cgattcaca
//
LOCUS       DATCUD010000702         1588 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49377, whole genome shotgun sequence.
ACCESSION   DATCUD010000702 DATCUD010000000
VERSION     DATCUD010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49377"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..306
                     /locus_tag="VIQ99_10205"
     CDS             <1..306
                     /locus_tag="VIQ99_10205"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY9183563.1"
                     /translation="GADPDAKTPAGDTALHLAAFAGKLEIVRALVEGGADMNVTDGAG
                     KTALQVVSEQKPRPPPPTAGALVDTDKIAQPAEIAALLKELAQAQGSAQANNVAEGR"
     gene            309..>1588
                     /locus_tag="VIQ99_10210"
     CDS             309..>1588
                     /locus_tag="VIQ99_10210"
                     /inference="COORDINATES: protein motif:HMM:NF019255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1587 domain-containing protein"
                     /protein_id="HEY9183564.1"
                     /translation="MRNWLYVAGGVAVVGAVAYFTIKPSPEAALQEQWAMVDKYCVEC
                     HNDAEFTADLSFERRGPDNVHTDPAVWEEVLRKLKIRAMPPRQQPQPDADVREEFVAA
                     LEGTLDAAAAANPYAGSTTVHRLNRAEYANAIRDLLGVEADLSSLLPSDGGDFGFDNI
                     AEVLTTSPLLLERYLTVALRVADMAVGNPEAAVTASAYRIPFELTQDKHLDGLPLGTR
                     GGTRVRHTFPADGEYVFAGRLVRGVEEGLFGIEGHDRPHEFLVLVDGKVVYSAEVGGA
                     ELHELSVAEGINVAQDHVNAAMTSPLVPVTAGPHEVVFTWRERAAAEQNAWEPGLRAS
                     LEAHNPSGMPRLEDGVIEGPYNVTGVSDTPTRERVYVCKPGSAAEEPACAEQILTSLA
                     RRAFRRPVTEDDIAGSLEFYNGARSEGGDFDDGIR"
BASE COUNT          269 a          527 c          566 g          226 t
ORIGIN      
        1 ggcgccgatc ccgacgcgaa gacgcccgca ggtgacacgg cgctgcacct cgccgcgttt
       61 gcgggcaagc tcgagatcgt gcgcgcgctg gtcgagggcg gcgcggatat gaacgtgacc
      121 gacggcgccg gcaagaccgc attgcaggtc gtgtccgagc aaaagccgcg gccgccgccg
      181 ccgaccgcag gcgcgctcgt cgatactgac aagatcgcgc agccggccga gatcgccgcg
      241 ctgctgaagg agctcgcgca agcgcagggc tccgcgcaag cgaacaacgt cgcagagggc
      301 aggtaatcgt gcggaattgg ctttacgttg ccggtggggt cgccgtcgta ggagcggtgg
      361 cctatttcac gatcaagcct tcgccggagg ccgcgctgca agagcagtgg gcgatggtcg
      421 acaagtactg cgtcgaatgc cacaacgacg ccgagttcac ggccgacctg tcgttcgaaa
      481 ggcgcgggcc cgacaacgtg cacaccgatc ccgcggtttg ggaagaggtg ttgcgcaagc
      541 tcaagatccg ggcgatgccg ccgcggcagc agccgcaacc ggatgccgac gtgcgcgagg
      601 agttcgtcgc ggctctcgaa ggcacgctcg acgcagcggc cgcggcgaac ccgtacgcgg
      661 gcagcacgac ggtccaccgg ctgaatcgcg ccgagtatgc gaacgcgatc cgcgatctgc
      721 tcggtgtcga ggccgacctc tcgtccttgc tgccgagcga cggcggcgac ttcggcttcg
      781 acaacatcgc cgaggtgctc acgacctcgc cgctgctgct cgagcgctat ctgacggtgg
      841 cgttgcgcgt ggccgacatg gccgtcggca accccgaggc ggccgtgacg gcgagcgcct
      901 accggatccc gttcgagctg actcaagaca agcacctcga cggcttgccg ctcggcaccc
      961 gcggcggcac gcgagtgcgt cacacgttcc cggccgacgg cgagtacgtg ttcgccggcc
     1021 gcctcgtgcg tggcgtggaa gagggcttat tcggcatcga aggtcacgac cggccgcacg
     1081 agttcctcgt gctcgtcgac ggtaaggtgg tctattcggc ggaagtcggc ggtgcggagc
     1141 tgcacgagct cagcgtcgcg gaaggcatca acgtcgcgca ggaccacgtc aacgcggcga
     1201 tgacctcgcc gttggttccg gtgaccgccg ggccgcacga ggtcgtgttc acgtggcgcg
     1261 aacgcgcggc cgccgagcag aacgcttggg agccggggct gcgcgcatcg ctcgaagccc
     1321 acaacccgtc gggcatgccg cggctcgagg acggggtgat cgagggcccg tacaacgtga
     1381 ccggagtcag cgacactccg acgcgcgaac gagtctacgt ctgtaagccg ggcagcgcgg
     1441 ccgaagaacc ggcgtgcgcc gagcagattc tcacatcgct ggcgcgccga gcgttccggc
     1501 ggcccgtgac cgaggacgac atcgccggct cgctcgagtt ctacaacggc gctcgctccg
     1561 agggcggcga tttcgacgac ggcattcg
//
LOCUS       DATCUD010000703         3098 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99337, whole genome shotgun sequence.
ACCESSION   DATCUD010000703 DATCUD010000000
VERSION     DATCUD010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99337"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..813
                     /locus_tag="VIQ99_10215"
     CDS             <1..813
                     /locus_tag="VIQ99_10215"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:NF004159.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEY9183565.1"
                     /translation="ARSAAAGIGGSSLVFTFEPTPKEFFSPASAPPRLTRFRERFEQL
                     ARSNIDELYCPRFAAIRGLAPREFIDDLLATRLRARHVVVGDDFRFGADRRGTVEELR
                     ARGEAHGIEVSEVAPVFWRGERVSSTAIRQALKAGDLTTARAMLGRDYSISGRVVRGL
                     GLGRKLGFPTANVNLKRLQAPIDGIFAARVTGLGERPLDGVASVGTRPTIGGNTALLE
                     VLIFDFDRDIYGRYITVHFVERLREERHFADLPAMQRQMHLDVAAARAALSD"
     gene            868..>3098
                     /gene="ileS"
                     /locus_tag="VIQ99_10220"
     CDS             868..>3098
                     /gene="ileS"
                     /locus_tag="VIQ99_10220"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEY9183566.1"
                     /translation="MFEPVGARYDGPELEKGILELWRRENVFGQVMARGRSRPKFVFY
                     EGPPTANGRPGIHHVLARTFKDLYPRYKTMRGFHCPRKAGWDTHGLPVEHQIEKELGI
                     FDKKRIEQEVGIASFTAQCRASVMRHVAEWEAMTERMGFWVDFKDAYFTLHNDYIESV
                     WQLLKQIWDKGLIYQGYKVVPYDPRIGATLSSHEVALGYREVEDPSIYVRFRVHGEAD
                     TFFLVWTTTPWTLPSNLLLAVHPDVEYAWVKRADETLILAKSLVAGVLGDGPHEITRT
                     ARGSELDGVRYERLFDYLPVKGDVCRVRPADFVTTEDGTGIVHVAPAYGEDDLKLGQR
                     HGLNVLHGVGEDGYFLPAVTPVAGKFFKEADPAIIALLRERGLLFRAGTYKHNYPFGW
                     RTGDPLIYYAKNAWYIRTTQYRERMVELNRGVNWVPEHIREGRFGNWLENNVDWALSR
                     ERFWGTPLPLWTDGKGDYVCIGSVAELEQRAGRRLGDLDLHRPSIDAVTFMHDGREYR
                     RVPEVIDCWFDSGAMPFAQWHYPFENVETFEKSFPADFICEAIDQTRGWFYTLHAIAT
                     MVKDEAAYKNVICLGLIVDQDGKKMSKSQGNIINPYDVFNAVGADALRWHFTARVAPD
                     VQKRVSVEIIADVASSFINTFWNTYAFFVMYARLDGFDRRTQVPHAQRPEIDRWILSL
                     LNRTVETATAALDDYDALRAGTAIESFVDQLSNWYVRRNRRRFWKAASGADKQAAYLT
                     LYE"
BASE COUNT          541 a          982 c         1029 g          546 t
ORIGIN      
        1 gcccgcagcg cggccgccgg catcgggggc tcgtcgctgg tgttcacgtt cgagccgacc
       61 ccgaaggagt tcttctcgcc ggccagcgcg ccgccgcgcc tcacgcgctt ccgcgagcgc
      121 ttcgagcaac tcgcgcgctc gaacatcgac gagctctact gcccgcgatt cgctgcgatt
      181 cgcggactcg ctccgcgaga gttcatcgat gatttgcttg cgacgaggct ccgtgcacga
      241 catgtcgtcg tcggggacga tttccgattt ggagccgatc gccgcggcac cgtggaggag
      301 ttgcgcgcgc gaggcgaggc acatggcatc gaggtcagcg aggtggcccc ggttttttgg
      361 cgcggcgaac gcgtcagcag caccgcgatt cgtcaagcgc tgaaggccgg cgacctgacg
      421 actgcgcgtg cgatgctggg ccgcgactac tcgatatcgg gtcgcgtcgt gcgagggctc
      481 ggcctcggac gcaagctcgg cttcccgacg gccaacgtga acttgaaacg gctccaagcg
      541 ccgatcgatg ggattttcgc cgcacgcgtc acgggcctcg gcgaacgacc gctcgacggc
      601 gtcgcgagcg tgggcacgcg gccgacgatc ggcggaaaca cggcgttgct cgaagttctg
      661 atcttcgact tcgaccgcga catctacggc cggtacatca ccgtgcactt cgtggagcgc
      721 ctccgcgagg agcgacactt cgccgatttg cccgcgatgc agcgccaaat gcatcttgac
      781 gtggcggctg cgcgggctgc gctaagcgat tgaatcgcgt acactcacgg cccttcggtt
      841 ccctcttccc cgcgctgaag tacgaccatg ttcgaaccag tgggcgcccg ttacgacggg
      901 cccgagctcg aaaagggcat tctcgagctc tggcgccgtg agaacgtttt tggccaggtc
      961 atggcccgtg gtcgctcgcg gccgaaattc gtgttctacg aggggccgcc gaccgcgaat
     1021 gggcggcccg gcatccatca cgtgctcgcg cgcacgttca aggacctcta tccgcgctac
     1081 aagaccatgc gcgggtttca ctgcccgcgc aaagcggggt gggacacgca cggcttgccg
     1141 gtcgagcacc agatagaaaa agagctcggg atcttcgaca agaaacgcat cgagcaggaa
     1201 gtcggcatcg cgagcttcac tgcgcaatgc cgcgcctcgg tgatgcgcca cgtcgccgaa
     1261 tgggaagcca tgaccgagcg catgggcttc tgggtcgact tcaaggatgc ctacttcacg
     1321 ctgcacaacg attacatcga gagcgtgtgg cagttgctga agcagatctg ggacaagggc
     1381 ctgatctacc agggctacaa ggtcgttccg tacgatccgc ggatcggtgc gacgctgtcg
     1441 tcgcacgaag tggctctggg atatcgcgag gtcgaagatc cgtcgatcta cgtccgcttc
     1501 cgggtccatg gcgaggcgga cacgttcttc ttggtatgga cgacgacgcc ttggacgctg
     1561 ccgtcgaacc tgttgctggc cgtgcatccc gacgtcgagt acgcgtgggt caagcgcgcc
     1621 gacgagacgc tgattctcgc gaagtcgctc gtcgcgggcg tgctcgggga cgggccgcat
     1681 gagatcacgc gcacggctcg cggcagcgag ctcgatggcg tgcgctacga gcgtctgttc
     1741 gattacctgc ccgtcaaggg cgacgtgtgc cgcgtgaggc ccgccgattt cgtgacgacc
     1801 gaggacggca ccgggatcgt gcacgtcgca ccggcgtacg gcgaagacga cttgaagctg
     1861 ggtcagcgcc atgggttgaa cgtgctgcac ggtgtgggcg aggacggcta tttcctgccg
     1921 gccgtgactc cggtggccgg caagttcttc aaggaggccg acccggccat catcgcgctg
     1981 ttgcgcgagc gcggcctgtt gttccgcgca ggcacgtaca agcacaacta tccgttcggc
     2041 tggcgaacgg gcgatccgct gatctattac gcgaagaacg cctggtacat ccgcacgacg
     2101 cagtaccgcg agcggatggt ggagctgaat cgcggcgtga actgggtgcc cgagcacatc
     2161 cgcgagggac ggttcggtaa ctggctcgag aacaacgtcg actgggcgct gtcgcgcgaa
     2221 cgcttctggg gcacgccgct gccgctctgg accgacggca agggcgacta tgtgtgcatc
     2281 ggctccgtgg ccgagctcga gcagcgcgcg ggtcgtcggc tcggcgatct cgatctgcat
     2341 cgcccgagca tcgatgccgt gacattcatg cacgacggtc gcgagtatcg ccgcgtcccc
     2401 gaggtcatcg actgttggtt cgattccggc gcgatgccgt tcgcgcaatg gcactatccg
     2461 ttcgagaacg tcgaaacgtt cgagaagagc ttcccggccg acttcatctg cgaggccatc
     2521 gaccagacgc gcggctggtt ctacacgctg cacgcgatcg cgacgatggt gaaggatgaa
     2581 gccgcgtaca agaacgtgat ttgcctcggc ctcatcgtcg accaagacgg caagaagatg
     2641 tcgaagtcgc agggcaacat catcaacccc tacgacgtct tcaacgccgt gggcgccgac
     2701 gctctgcgct ggcacttcac ggcgcgcgtg gcgccggacg tgcagaagcg cgtgtccgtc
     2761 gagatcatcg ccgacgtcgc gagcagcttc atcaacacgt tctggaacac ctacgcgttc
     2821 ttcgtgatgt acgcgcggct cgatggattc gatcggcgca cgcaggtgcc gcacgcgcag
     2881 cgtcccgaga tcgaccgctg gattctgtcg ctgctgaatc gcaccgtcga gacggcgacg
     2941 gcggcgctcg acgactacga cgcgctgcgc gcgggcacgg ccatcgagag cttcgtcgat
     3001 cagctcagca actggtacgt gcgccgcaac cgccgccgct tctggaaagc cgcgagcggc
     3061 gcggacaagc aggcggcgta cttgacgctc tacgagtg
//
LOCUS       DATCUD010000704         2246 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63203, whole genome shotgun sequence.
ACCESSION   DATCUD010000704 DATCUD010000000
VERSION     DATCUD010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63203"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..996
                     /locus_tag="VIQ99_10225"
     CDS             <1..996
                     /locus_tag="VIQ99_10225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183567.1"
                     /translation="SLADEAAATIDARGKLVVPGLIDIHSHAGRNMEGPALCLQDGVT
                     GYIDAGSGGADNIDAVVAVAKAGPQQGRVLVNIGRSGILPEGDTKDLTLADVGAARAA
                     IERHRDYVVGIKARLSATVVGDHDVEVLRRAQDVAAPLGLPVMIHMGQSPSPMSALLP
                     LLKPGDIVTHMFAPPPNAIVDERGRIFPEVLAARRNGIVFDVGNGVRDHIRWDIVEQV
                     MRAGFWPDTFSTDWNVMSKTTGVVDFPNCMSKLFNYGMSVPEAIACATVNAARTFPAF
                     RDRGTLNIGAPADVAILELREGEFEFLDNYENKIKGTRRLFPSETVLGGVRVPRA"
     gene            999..1409
                     /locus_tag="VIQ99_10230"
     CDS             999..1409
                     /locus_tag="VIQ99_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012173594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEY9183568.1"
                     /translation="MARPRVTFRSLRVAPEFRDFVLDQLARVPELRSKRMFGGIGLYS
                     GDRFFGIVAADELFFKVDDSNRAAYEAVGSEPFRPLADPKRPVSMSYWRVPIEVLEDP
                     AELVEWARTAIRVASSAAPARRPRRKRRPSRDRD"
     gene            1546..>2246
                     /locus_tag="VIQ99_10235"
     CDS             1546..>2246
                     /locus_tag="VIQ99_10235"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183569.1"
                     /translation="MLLQLLNDLRYAARRLASSPGFTTATVATVALGVGINTGLFSVL
                     NGIVLRDLPAPDAGELVSIHQTWTGGFVAVPRFTAEEYRAYRDGTETLSGILAYSSGT
                     TVTLGGEAPQEITGTLVSCNYFEVLRYPAALGRGFANDCDAEGAVPTVVLGHDLWTTA
                     FGADSGIVGREVQLNRQAFVVAGVAPEGMRGVDMLPVQFFAPLAAQPILDPEPLLPSG
                     GSLRWLVLLGRLADGA"
BASE COUNT          358 a          756 c          771 g          361 t
ORIGIN      
        1 agcctcgcag acgaggccgc cgcgacgatc gacgcgcgcg gcaagctcgt cgtgccgggc
       61 ctgatcgaca tccactcaca cgcgggccgc aacatggaag ggcccgcgct gtgcctgcaa
      121 gacggcgtca cgggctacat cgatgcggga tcgggaggcg ccgacaacat cgacgccgtc
      181 gtcgccgtcg caaaagccgg accgcagcaa ggccgcgtgc tcgtgaacat cggacgctcc
      241 ggcatccttc ccgaaggcga cacgaaggat ttgacgctgg ccgacgtcgg cgccgcgcgc
      301 gccgcgatcg agcgccatcg cgactacgtc gtgggcatca aggcgcggct ctcggccacc
      361 gtagtcggcg accacgacgt cgaggtgctg cgccgcgcgc aagacgtcgc cgcgccactc
      421 ggcctgcccg tgatgatcca catggggcag agcccgtcgc cgatgtctgc gctgctgccg
      481 ctgctgaagc ccggcgacat cgtcacgcac atgttcgcgc cgccgccaaa tgcaatcgtc
      541 gacgagcgcg gtcgcatctt tcccgaggtg ctcgcggcgc ggcgcaacgg aatcgtgttc
      601 gacgtcggta acggcgtccg cgatcacatc cgctgggaca tcgtcgagca agtcatgcgc
      661 gccggcttct ggcccgacac gttctcgacc gattggaacg tgatgagcaa gacgaccggc
      721 gtcgtcgact ttccgaactg catgtcgaag ctgttcaact acggcatgtc cgtgcccgag
      781 gcgatcgcgt gcgcgaccgt gaacgccgcg cgcacgttcc cggcgttccg cgaccgcggc
      841 acgctgaaca tcggcgcgcc ggccgacgtc gcgatcctgg agctgcgcga gggcgagttc
      901 gagttcctcg acaactacga gaacaagatc aaaggtactc gacgcctgtt tccgagcgag
      961 accgtgctcg gcggagtgcg cgtgccgcgg gcttgacgat ggctcgaccg cgagtgacgt
     1021 ttcgctcgtt gcgcgtcgcg ccggagttcc gcgacttcgt gctggatcag ctcgcgcgag
     1081 tccccgagct gcgatcgaag cggatgttcg gcggaatagg cctctactcc ggcgaccgat
     1141 tcttcggcat cgtcgcggcc gacgagctgt tcttcaaagt cgatgacagc aaccgcgccg
     1201 cgtacgaggc ggtcggcagc gagccgtttc ggccgctcgc cgatccgaag cggccagtgt
     1261 cgatgtcgta ctggcgcgtg ccgatcgaag tgctcgagga tccggccgag ctcgtcgaat
     1321 gggcgcgcac cgcgatccgc gtcgcgtcga gtgccgcacc ggcgcgcagg ccgcgcagaa
     1381 aacggcggcc gtcccgagac cgggactgac ggccgcgatt gtgggacgac ggcagccggc
     1441 gaacatgcgg ccccggccaa aacttccgct cgatcaaggg gctacgcagg ccgtgacgat
     1501 ggcacgcggc ttgctcaacc tgcgctgaac cttggggagg gaaccatgtt gctccagctc
     1561 ctgaacgacc tgcgttacgc cgcgcgacgc ctggcgtcga gcccggggtt cacgacagca
     1621 accgtggcga cggtcgcgct cggcgtcggc atcaacacgg ggttgttctc ggtgctgaac
     1681 ggcatcgtgc tgcgcgatct gccggcaccg gacgcgggcg agctcgtcag catccatcaa
     1741 acgtggacgg gcggcttcgt cgcggtgccg aggttcacgg ccgaggagta tcgcgcctat
     1801 cgcgacggca cggagactct ctccgggatt ctggcctact cgagcggcac caccgtcacg
     1861 ctcggcggcg aggcgcctca ggagatcacg ggcacgctcg tctcgtgcaa ttacttcgag
     1921 gtgcttcggt acccagccgc attggggcgc ggattcgcga acgactgcga tgccgagggc
     1981 gcggtgccga ccgtcgtgct cggccacgat ctctggacga cggcattcgg cgccgattca
     2041 ggcatcgtcg gccgcgaggt gcagttgaat cggcaagcgt tcgtcgtcgc cggtgtagcg
     2101 ccggaaggca tgcgcggtgt cgacatgctg cccgtgcagt ttttcgcgcc gctcgcggcg
     2161 cagcccatcc tggatccgga gccgctcttg ccgagtggcg gcagcttgcg ctggctggtg
     2221 ctactcgggc gtctcgccga cggcgc
//
LOCUS       DATCUD010000705         2056 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56644, whole genome shotgun sequence.
ACCESSION   DATCUD010000705 DATCUD010000000
VERSION     DATCUD010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56644"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            10..873
                     /locus_tag="VIQ99_10240"
     CDS             10..873
                     /locus_tag="VIQ99_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018443549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183570.1"
                     /translation="MNATRPEILHTPSADASGFAVAARPLGFWTKLYANGAARKTVLL
                     VLLAAIWEIYARTLNNPLLFPTFTDTVAALLSGIAAGEIPTAGLYTLSLLLKGYVAGL
                     VFAALLTAFASVSRIGADLLETLTAMFNPLPSIALLPLALIWFGLGDNSVIFVLVHAV
                     LWAVALNTFAGFRALSPTLRMVGQNYGLSSAGYIVRILIPGAFPSILTGLKVGWAFAW
                     RTLIAAELVFGVSSGSGGLGWYIFENKNQLRIPEVFAGLLTVIIFGLFVENVIFRTIE
                     RRTVKRWGMQT"
     gene            870..2009
                     /locus_tag="VIQ99_10245"
     CDS             870..2009
                     /locus_tag="VIQ99_10245"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEY9183571.1"
                     /translation="MRSRPTIPFALLALLAGAPAAAQPPECDALCEAGAALIERFELR
                     ESATPVRERAGWAAPKKIVVADVEAADVLRALAPNAEVVGVPGLRNFAGMAEVIADAD
                     VLVGLCTPDLIARGQKLKWIQLLNAGADSCTTIPAVAERAILVTNLQRIQGPHMAEHA
                     IALMLALARALPVYVGEQQAGAFTRGFRELRAERPLEVEGKTLLVVGLGGIGTEVAKR
                     AHGLGMHVIATRNSSRVGPDYVEYVGLADEYVELAKHADVVVNATPLTPATRGMFDER
                     FFAAVKPGAYFINIGRGESVATDALVEALRAGRVAGAGLDVTDPEPLPAGHPLWSLPG
                     VIITPHVATSSDFRDDRTITLVAENLRRYVRGDKVLSVVDLAQGY"
BASE COUNT          305 a          705 c          703 g          343 t
ORIGIN      
        1 ctactctcga tcaacgcgac acggcccgag atccttcaca cgccgagcgc cgacgcgagc
       61 ggcttcgcgg tcgccgcccg gccgctcggg ttttggacca agctgtacgc gaacggggcc
      121 gcgcgcaaga ccgtgctgct cgtgctcctg gccgcgatct gggaaatcta tgcgcgcacg
      181 ctgaacaatc cattgttgtt cccgacgttc acggacaccg tagcggcgct gctctccgga
      241 atcgcggccg gcgagattcc gaccgcgggg ctctacacgc tgtcgctgct gctgaagggc
      301 tacgtcgcag ggctcgtgtt tgcggcactg ctgaccgcgt tcgcgagcgt gtcgcggatc
      361 ggcgccgact tgctcgagac actgaccgcg atgttcaacc cgctgccgtc gatcgcgctg
      421 ttgccgctcg cgctgatctg gttcggcttg ggagacaaca gcgtgatctt cgtgctcgtg
      481 cacgccgtgc tgtgggccgt ggcgctgaac acgttcgcgg gctttcgcgc gctgtcgccg
      541 acgctgcgca tggtcggcca gaattacggc ctgtcgagcg cgggctatat cgtgcggatc
      601 ctgatcccgg gcgcgttccc gagcatcttg acggggctca aggtgggctg ggcgttcgcg
      661 tggcgcacgc tgatcgcggc tgagctcgtg ttcggcgtga gctcggggtc cggcgggctc
      721 ggctggtaca tcttcgagaa caagaaccag ctccggatcc ccgaagtctt cgcgggcctg
      781 ctgaccgtga tcatcttcgg cctgttcgtc gagaacgtga tctttcggac gatcgaacgg
      841 cgcaccgtga agcgttgggg catgcaaacg tgaggtcgcg gcccacgatt ccgttcgccc
      901 tactcgctct gctcgccggc gcgccggcag cggcacaacc gccggagtgt gacgctctgt
      961 gcgaagccgg cgcggcattg atcgagcgtt tcgagctccg cgagtcggcc acgccggtcc
     1021 gcgagcgcgc cggctgggcc gcgccgaaga aaatcgtcgt cgccgacgtc gaagcggccg
     1081 acgtgctgcg cgcgctcgcg ccaaacgccg aggtcgtcgg cgtgccgggc ctccgcaact
     1141 tcgcgggcat ggccgaggtc atcgcggacg ccgacgtctt ggtcgggctc tgcacgccgg
     1201 atctgatcgc acgcggccag aagctgaagt ggattcagct cctgaacgcc ggcgccgaca
     1261 gctgcacgac gattccggcc gtcgccgagc gcgccatctt ggtcacaaat cttcaaagga
     1321 tccagggccc gcacatggcc gagcatgcga tcgcactgat gctcgcgctc gcccgcgcgt
     1381 tgccggtgta cgtgggcgag caacaagccg gcgctttcac gcgcggcttc cgcgagctgc
     1441 gcgccgagcg gccgctcgag gtcgagggca agacgctgct cgtcgtgggc ttgggcggca
     1501 tcggcaccga ggtcgcgaag cgcgcacacg gtcttggcat gcacgtgatc gcgacgcgca
     1561 acagctcgcg cgtaggtccc gactacgtcg agtacgtggg cctcgccgac gaatacgtcg
     1621 agctcgcgaa gcacgccgac gtcgtcgtga acgcgactcc gctgacaccc gcgacacgcg
     1681 ggatgttcga cgaacgattc ttcgccgcgg tcaagccggg tgcgtacttc atcaacatcg
     1741 gccgcggcga aagcgtcgcc accgacgcgc tcgtggaggc gctacgcgcg ggccgcgtcg
     1801 cgggcgcggg gctcgacgtc acggacccgg aaccgctgcc cgcgggtcat ccgctgtgga
     1861 gcctgcccgg cgtgatcatc acgccgcacg tcgccacgag ctcggatttc cgcgacgacc
     1921 gcacgatcac gctggtagcc gagaacctgc gccgctacgt gcgcggggac aaggtcctgt
     1981 ccgtcgtcga cctcgcgcaa gggtactgac ccccggcctc gacgccgcgg tgcgcaaccc
     2041 gccgagcgcg gcgcca
//
LOCUS       DATCUD010000706         1546 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99343, whole genome shotgun sequence.
ACCESSION   DATCUD010000706 DATCUD010000000
VERSION     DATCUD010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99343"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..164)
                     /locus_tag="VIQ99_10250"
     CDS             complement(<1..164)
                     /locus_tag="VIQ99_10250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014199755.1"
                     /note="catalyzes the formation of oxalozcetate and
                     L-glutamate from L-aspartate and 2-oxoglutarate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate transaminase/aspartate
                     4-decarboxylase"
                     /protein_id="HEY9183572.1"
                     /translation="MSHAGLSPFELKDKLVALAKHRGERLWLNAGRGNPNWLALEPRA
                     AFFCLGEFAVA"
     gene            321..827
                     /locus_tag="VIQ99_10255"
     CDS             321..827
                     /locus_tag="VIQ99_10255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183573.1"
                     /translation="MKSDQNLYAKTQRRIVAVGLCAMAAALPAGANAASETYTWSAEL
                     VAVDERARTITVQSWLVGNAEVDFGALDSGDRVTLTWSGINTAAGVRRIVDGSAPDGD
                     LLTLPIEYVSAEHDNRYVRFKVAAPSDDVAMLAKLPPGSWITATSPRRAQRFEEAVAD
                     LRPYNDVR"
     gene            853..1428
                     /locus_tag="VIQ99_10260"
     CDS             853..1428
                     /locus_tag="VIQ99_10260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183574.1"
                     /translation="MAACAMVTGAVLMMPSAFADGPRLVVDTFTATTANMTPAGLNLR
                     IQILEWQEADARAEVVATLAAGADAATPLGKLPTVGYVWPSGSPVGYSLKYAHREAQA
                     DGSERITLVTDKRLGSFDFKGWSVASPAVSNEEPYSVIELYLNGSGAGTGTLSLVADV
                     VLDETNGTVALQHGAGAPGLLASVQRAASAR"
BASE COUNT          267 a          536 c          520 g          223 t
ORIGIN      
        1 gcgacggcga actcaccgag gcaaaagaac gccgcacgcg gctcgagcgc caaccagttc
       61 gggttgccgc ggccggcgtt gagccacagg cgctcaccgc gatgcttcgc gagcgcgacg
      121 agcttgtctt tgagctcgaa cgggctcaga ccggcgtgcg acacatccct cccttggctt
      181 cagccccgag gcgctcaggc taagggcctg cgcacgtaag tacaatcgcc gcgcctcgcg
      241 gggggcttga aaagaaaaat acctcgccca tacgtctcgg ccgttcactc aggaaccgct
      301 caaaccggtg aggaggcact atgaagagcg atcagaatct gtacgcaaag acacaacgcc
      361 gaatcgtcgc ggtgggactg tgcgcgatgg cagcggcact gccggccgga gcgaacgccg
      421 ccagcgagac ttacacctgg tccgccgagc tcgtcgctgt cgacgagcgt gcgcgcacga
      481 tcaccgtcca gtcgtggctg gtcggcaacg cggaagtcga tttcggcgca ctcgacagcg
      541 gtgaccgcgt caccttgacg tggtccggca tcaacactgc agcgggcgtc cgccgcatcg
      601 tagacggctc ggcacccgac ggggaccttt tgacgctgcc gatcgagtac gtatccgcag
      661 agcacgacaa ccgttatgta cggttcaagg ttgccgcgcc gagcgacgac gtcgcgatgc
      721 tcgcaaagct gccgccgggc tcctggatca cagcgacctc gccgcgccgt gcgcaacgct
      781 tcgaggaggc ggtcgcggac ctgcggccgt acaacgatgt ccgctaggcg cacgcgctat
      841 gccgcggctc gtatggccgc gtgcgcaatg gtcacgggtg ccgtgctcat gatgccgagc
      901 gcgttcgcgg acggtccccg gctcgtcgtg gacacgttca cggccacgac ggccaacatg
      961 acgccggccg gtttgaactt gcgcatccag atcctcgagt ggcaggaggc cgatgcgcgc
     1021 gccgaggtcg tcgcgacgct cgcagcgggg gccgacgcgg ccacaccgct cggcaagctg
     1081 ccgacggtcg gctacgtgtg gccgagcggc agcccggtgg gctactccct gaagtacgcc
     1141 caccgcgagg cgcaggccga tggcagcgag cgcatcacgc tcgtcaccga caagcgcctc
     1201 ggcagcttcg acttcaaggg ctggtccgta gcgagcccgg ccgtgtcgaa cgaggagccg
     1261 tactcggtca tcgagctcta tctgaacggc tcgggcgccg gaaccggaac gctgtcgctc
     1321 gtggccgacg tcgtgctcga cgaaacgaac ggcacagtcg cgttgcagca cggggccggt
     1381 gctccggggc tgctcgcgag cgtgcagcgc gcagcgagcg cgcgctaacc gcaccgccca
     1441 ggggcagggc gggctcggct cgccccgccg cctcgaccgc gatcggcgag cccgctcacg
     1501 atcagctcga cggccttctc gcacgacggc gcaatccccg ccgttc
//
LOCUS       DATCUD010000707         1963 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105948, whole genome shotgun sequence.
ACCESSION   DATCUD010000707 DATCUD010000000
VERSION     DATCUD010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105948"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1105)
                     /gene="glnS"
                     /locus_tag="VIQ99_10265"
     CDS             complement(<1..1105)
                     /gene="glnS"
                     /locus_tag="VIQ99_10265"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015725151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HEY9183575.1"
                     /translation="MEPEASSARGRDFISQFVADDVAAGKNGGRVQTRFPPEPNGYLH
                     IGHAKAICVDFGIARDFGGTCYLRFDDTNPERETEEFVESIKRDVRWLGFDWGDRLRH
                     ASDYFREIHDCAVELIKRGLAYVDHQSSEEIRKNRGTLTEPGKNSPFRDRSVDENLRL
                     FAAMRRGEIDEGVCVLRAKIDMASPNINLRDPTLYRIRKVAHQRTGDEWCIYPMYDYA
                     HTMSDAIEGTTHSLCTLEFEDHRPLYDWFLDQLWAGRPSRPRQIEFSRANLMFTVTSK
                     RKLKQLVDDGHVEGWDDPRMPTLAGIRRRGYTPASIVEFVHRIGTTKKEKVAELGQLE
                     GCVREDLNEHAPRRFAVLDPVKIVIDTYPEGQEE"
     gene            1209..>1963
                     /locus_tag="VIQ99_10270"
     CDS             1209..>1963
                     /locus_tag="VIQ99_10270"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY9183576.1"
                     /translation="MTRSQHRAHVPAIAIAALAGCVINPVTGDRELALVTAEQELAIG
                     EQQYAPSQQMQGGEYSLDPALADYVSSVGQKVAAVSDRKLPYEFVVLNNSVPNAWALP
                     GGKIAVNRGLLVELQSEAELAAVLGHEVVHAAARHGALAMQRGMLLQGALLATQVAAQ
                     RGDYGGLAVGAASIGAQLISQRNSRSAELEADLYGMRYMSAAGYDPAAAVSLQETFVR
                     LSEQGGEAQGRLATLFASHPPSTERVQKNRETAT"
BASE COUNT          344 a          642 c          629 g          348 t
ORIGIN      
        1 actcttcctg cccttccggg tacgtgtcga tcacgatctt cacgggatcg agcacggcga
       61 aacggcgagg cgcatgctcg ttcagatcct cgcgcacgca accttcgagc tggccgagct
      121 cggccacttt ctctttcttc gtcgtgccga tgcggtgcac gaactcgacg atcgatgcgg
      181 gcgtgtagcc gcgccgccgg attccggcca acgtcggcat gcgcggatcg tcccaacctt
      241 ccacgtggcc gtcgtcgacg agctgcttca gcttgcgctt actcgtgacc gtaaacatca
      301 ggttcgcacg cgagaactcg atctggcgcg ggcgactcgg acgaccggcc cagagctgat
      361 cgaggaacca gtcgtagagc ggccggtgat cctcgaattc gagcgtgcac aacgaatgcg
      421 tcgtgccttc gatcgcgtcc gacattgtgt gggcgtagtc gtacatcgga tagatgcacc
      481 attcgtcgcc ggtgcgttgg tgcgcgacct tgcgaatgcg atacagcgtc gggtcgcgca
      541 ggttgatgtt cggcgaggcc atgtcgatct tcgcgcgcag cacgcacacg ccttcgtcga
      601 tctcgccgcg ccgcatggcc gcgaacaacc gtaggttctc gtcgacggag cgatcgcgaa
      661 acgggctgtt cttgccgggc tccgtcagag tgccgcggtt cttgcgaatc tcctcggagc
      721 tctgatggtc gacgtacgcg aggccgcgct tgatgagctc gacggcgcag tcgtgaatct
      781 cacggaagta atccgacgca tggcgcagac gatcgcccca atcgaagccg agccagcgca
      841 cgtcgcgctt gatgctttcg acgaactcct cggtctccct ctccggattc gtgtcgtcga
      901 agcggagata acaggtgcca ccgaaatccc gcgcgatccc gaagtcgacg cagatggcct
      961 tcgcatggcc gatgtgcagg tagccgttcg gctccggtgg gaagcgcgtc tgcacgcggc
     1021 cgccattctt tccggccgca acgtcgtccg cgacgaactg gctgatgaag tcgcggccac
     1081 gcgcggaact tgcttcgggc tccatggccg cgcattgtcg ttcaaccacg acaccaaact
     1141 caattcatgg tcgggccgcg acgagaaggg ctgggaactt ccccgagaaa tcgtcgacaa
     1201 tgattgttat gactcgctcg cagcacaggg ctcatgtacc ggcgatcgca atcgccgccc
     1261 tcgccggctg cgtcatcaac cccgtcaccg gcgaccgcga gctcgcgctc gtgacggccg
     1321 aacaggagct tgcgataggc gagcagcaat acgcgccgtc gcagcaaatg cagggcggcg
     1381 aatacagcct ggatcccgcg ctcgcggatt acgtctcgag cgtcggccaa aaggtggctg
     1441 cggtcagcga tcgcaagctt ccctacgagt tcgtggttct gaacaattcg gtgccgaacg
     1501 cctgggcgct gccgggcggc aagattgccg tgaatcgcgg gctgctcgtg gagctgcaat
     1561 cggaagccga gctcgcggcc gtgctcggtc acgaggtcgt gcacgcggcc gcgcgccacg
     1621 gcgccctcgc gatgcagcgc ggtatgttgc tgcaaggagc gttgctcgcg acccaggtcg
     1681 cggcacagcg aggcgactac ggcgggctcg cggtcggcgc cgccagcatc ggcgcgcagc
     1741 tgatctcaca gcgcaatagc cgcagcgccg agctcgaggc ggatctctac gggatgcgct
     1801 acatgtcggc agccggctac gacccggccg ccgcggtctc gctccaagaa acgttcgtgc
     1861 gcctttccga gcagggcggc gaagcccaag gccgcctcgc gacattgttc gcgagccatc
     1921 cgccgtcgac cgaacgcgtg cagaagaatc gcgagacggc cac
//
LOCUS       DATCUD010000708         2030 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63224, whole genome shotgun sequence.
ACCESSION   DATCUD010000708 DATCUD010000000
VERSION     DATCUD010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2030
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63224"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..918)
                     /locus_tag="VIQ99_10275"
     CDS             complement(<1..918)
                     /locus_tag="VIQ99_10275"
                     /inference="COORDINATES: protein motif:HMM:NF025598.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4340 domain-containing protein"
                     /protein_id="HEY9183577.1"
                     /translation="MSRGVVIGLAAALVALVLLLTFGQRGGGSSSATGDPFVAELKDA
                     LGDIERVTIVKANGETVATLERRPDRWVAVDRNDYAASASKLRQALTDLAEARILEQK
                     TANAELYNRLGVEDVTSADAAGISVAFTAAGKELPAVILGNAEGSRYRYVRRAGEAQS
                     FLIDRNPDFPRTAAQWLDSQIVNIDSERVREVTITHADGEVVRISKTGPELTNFEVAN
                     VPSGRELLYPGVANVIGGALRELNLEDVQPASAATAERPTVVEVRTFDGLVVRVTGTK
                     TDDESWISLEASVDAATAAQAAAPAATPAE"
     gene            complement(915..>2030)
                     /locus_tag="VIQ99_10280"
     CDS             complement(915..>2030)
                     /locus_tag="VIQ99_10280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183578.1"
                     /translation="GRALIFVDPNAEILAGADPSGLGLSGGSSSTLDKLFAAWGVTFD
                     TQRVVADNRYGLSIGNRFQPMRHIGLLGLDGDAMSQDDPITSGLSSINVGIAGHFELA
                     EGATAKLTPLLSSSVESELMPADRFQFLPDPEELLNGFTPSGKQFVIAARLEGPLKSA
                     FPEGAPTNEGREAPVDAALSADHIASNENANLVLVGDVDILSDRLWVQTQNFLGQRLV
                     TAFANNGDFVINALDNLSGSAALIGLRSRATYTRPFTKVEELRRRADLEFRATEEQLE
                     AELTQTEQRLGELQAARSDGNSLLMSPEQQAEIQRFLDEQVRIRQELRAVRRNLDADI
                     DRLGTWLKVINIALVPVLLTILALAVVVVRRRRKARA"
BASE COUNT          299 a          687 c          697 g          347 t
ORIGIN      
        1 ttcggccggc gtggccgcgg gcgcggctgc ttgcgcggcc gtggccgcgt cgacgctggc
       61 ttcgaggctg atccagctct cgtcgtccgt cttcgtgccc gtgacgcgca cgacgagccc
      121 gtcgaacgtg cggacctcca cgaccgtcgg ccgctctgcg gtcgcggccg aagcgggctg
      181 cacgtcctcg aggttcagct ctcgcaacgc gccaccgatc acgttcgcga cgccgggata
      241 caggagctcg cgcccggacg ggacgttggc gacctcgaag ttcgtgagct cgggccccgt
      301 cttcgagatc ctgaccacct cgccgtcggc gtgcgtgatc gtgacctcgc gcacgcgttc
      361 gctgtcgata ttcacgatct gcgagtcgag ccattgtgcg gccgtgcgcg ggaagtcggg
      421 attgcggtcg atcagaaagc tctgcgcctc gccggcgcga cggacgtagc ggtacctcga
      481 gccttcggcg ttgccgagga tcacggccgg caactcctta ccggcggccg tgaatgcgac
      541 gctgattccg gcggcgtcgg cgctcgtgac gtcctcgacg ccgagccggt tgtacagctc
      601 ggcattcgcg gtcttctgct cgaggattcg cgcttcggcg agatcggtca gcgcttggcg
      661 aagcttgctc gcgctcgccg cgtagtcgtt cctgtcgacg gcgacccaac gatccggccg
      721 ccgctccagc gtcgcgacgg tctcgccgtt cgccttcact atcgtgacgc gctcgatgtc
      781 gccgagagcg tctttgagct cggcgacgaa cggatcgccc gtcgcggacg acgagccgcc
      841 gccgcgttga ccgaacgtca gcagcaacac gagggcgacg agcgccgccg cgagaccgat
      901 gacgacgccg cggctcatgc gcgcgccttc cggcgccgcc gcacgacgac aaccgcgagt
      961 gcgaggatcg tcaggagcac gggcacgagc gcgatattga tgaccttgag ccacgtgccg
     1021 aggcgatcga tgtcggcatc gaggttgcgc cggaccgcgc gcaactcctg gcggatgcgg
     1081 acctgctcgt ccaggaaacg ctgaatttcg gcctgttgct cggggctcat cagcaacgag
     1141 ttgccgtcgc tgcgcgcggc ttggagctcg cccaagcgct gctcggtctg cgtgagctcg
     1201 gcctcgagct gctcctcggt cgcgcggaac tcgagatcgg cgcggcgcct gagctcctcg
     1261 accttcgtga acggacgcgt gtaggtcgca cggctgcgga gaccgatcag ggctgcgctg
     1321 cccgagaggt tgtcgagcgc gttgatcacg aagtcgccgt tgttcgcgaa cgccgtcacg
     1381 agccgctgcc ccaagaaatt ctgcgtctgc acccagagcc ggtcgctcaa gatgtcgaca
     1441 tcgccgacga gcactagatt cgcgttctcg ttggaggcga tatggtcggc cgagagtgcc
     1501 gcgtcgacgg gcgcctcgcg gccctcgttc gtcggcgcac cctccgggaa cgcggacttg
     1561 agcggtccct cgagtcgcgc cgcaatcacg aactgcttcc cgctcggcgt gaagccgttc
     1621 agcagctcct cggggtccgg caggaattgg aagcggtcgg ccggcatcag ctcggactcg
     1681 acgctcgagg acaggagcgg cgtgagcttg gccgtggcgc cttcggcgag ctcgaagtgc
     1741 ccggctatgc cgacgttgat cgagctcaag cccgacgtga tcggatcgtc ctggctcatc
     1801 gcgtcgccgt cgaggccgag caagccgatg tgccgcatcg gctgaaagcg attgccgatg
     1861 ctgagtccgt agcgattgtc ggcgacgaca cgctgcgtat cgaacgtgac gccccaggcc
     1921 gcgaacagct tgtcgagcgt cgagctcgag ccccccgaga ggccgaggcc gctcggatcg
     1981 gcgcccgcga ggatttcggc gttcgggtcg acgaagatca gcgctcgccc
//
LOCUS       DATCUD010000709         1792 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21055, whole genome shotgun sequence.
ACCESSION   DATCUD010000709 DATCUD010000000
VERSION     DATCUD010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21055"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..967
                     /gene="ispB"
                     /locus_tag="VIQ99_10285"
     CDS             <1..967
                     /gene="ispB"
                     /locus_tag="VIQ99_10285"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012323643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEY9183579.1"
                     /translation="LDGLRSLVGDDWGEVNRTIVRRLGSDVTLVNQVAHHIIHNGGKR
                     LRPLAVLLAARACDPNRSQEHIAAAAIIEFIHTATLLHDDVVDNSGLRRGQETANAVF
                     GNQASVLVGDFLYSRSFQMMVELGEIRILDVLADATNTIAEGEVLQLMNCNNPDTSEA
                     DYMEVIYRKTAKLFEAGTRIGAILAHQNDEIEQALATYGRHLGQAFQLVDDALDYDAK
                     PEEFGKNIGHDLAEGKPTLPLIYAMAHGSAAERHMIREAIETGGTRNLTSIQLAIETS
                     GGLRYTAERARQEVDVAIAALAPLSPSIFRDGLVELAQFAIRRRY"
     gene            complement(961..1290)
                     /locus_tag="VIQ99_10290"
     CDS             complement(961..1290)
                     /locus_tag="VIQ99_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020008841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HEY9183580.1"
                     /translation="MADDDTLTGRDQVEIEAAVLRRLLRHFDERKDVQNIELMILAGF
                     CRNCLSRWFVEAARERGLSVDLDAAREKIYGMPYAEWKQRYQPPATKEQLERFEAVEK
                     AKAARSQ"
     gene            complement(1311..>1792)
                     /locus_tag="VIQ99_10295"
     CDS             complement(1311..>1792)
                     /locus_tag="VIQ99_10295"
                     /inference="COORDINATES: protein motif:HMM:NF012888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008146 - sulfotransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sulfotransferase domain-containing protein"
                     /protein_id="HEY9183581.1"
                     /translation="FVRHYDFAAGTWETFFECFLAGDVDFGDYFDNLTSWWPLRREPN
                     VLFLTYESMLADPAAAVEALAGFLGGAARDLARDERRLAGVVRDSSFGEMRQNQDRWS
                     SRRPEGMPEFVRKGIVGDWANHFSADQARRLGAKLRARTVGTDIEALWPGLVSAALE"
BASE COUNT          323 a          633 c          547 g          289 t
ORIGIN      
        1 cctcgacggg ctacgcagtc tggtcggcga cgattggggc gaggtcaacc gtacgatcgt
       61 gcggcgcctc ggcagcgacg tcacgctcgt gaatcaagtc gcccaccaca tcatccacaa
      121 cggcggcaaa cggctgcgtc cgttggccgt gctgctcgcg gcgcgcgcgt gcgacccgaa
      181 tcgcagccaa gagcacatcg cggccgcggc gatcatcgag ttcatccaca cggcgacatt
      241 gctccacgac gacgtcgtcg acaactccgg cctgcgccgc ggccaggaaa ccgcgaacgc
      301 cgtgttcggc aatcaggcca gcgtgctggt cggcgacttc ctgtactcgc gctcgttcca
      361 gatgatggtg gagctcggcg agatccgaat cctcgacgtg ctcgccgacg ccacgaacac
      421 gatagccgag ggcgaggtat tgcagctcat gaactgcaac aaccccgaca cgagcgaggc
      481 ggactacatg gaggtcatct accgcaagac cgccaagctg ttcgaggccg gcacgcgaat
      541 cggcgcgatc ctggctcacc agaacgacga gatcgagcaa gcgctcgcga cctacgggcg
      601 gcatttgggc caagcattcc agctcgtcga cgacgcgctc gactacgacg cgaagcccga
      661 ggaattcggc aagaacatcg ggcacgacct ggccgaaggc aagccgacgc tcccgctgat
      721 ctacgcgatg gcgcacggca gcgcggccga gcggcacatg atccgcgaag ccatcgagac
      781 cggtggcacg cggaacctca cgtcgattca gctcgcgatc gaaacgtccg gcgggctccg
      841 ctacacggcg gagcgcgcgc ggcaggaggt cgacgtcgcg atcgccgctc tcgcgccgct
      901 gtcaccgtcg atctttcgcg acgggctcgt cgagctcgcg cagtttgcga tccgccggcg
      961 ttactgagaa cgcgccgcct tcgccttctc gacggcttcg aaccgttcga gctgctcctt
     1021 cgtcgctggc ggctgatagc gctgcttcca ttccgcatag ggcatgccgt agatcttctc
     1081 gcgcgccgcg tcgaggtcga cggataggcc gcgctcgcgc gccgcctcga cgaaccacct
     1141 gctcaagcaa ttgcgacaga accccgcgag aatcatgagc tcgatgttct gcacgtcttt
     1201 gcgctcgtcg aaatgtcgta gcagccgtcg tagcaccgcc gcttcgatct cgacttggtc
     1261 gcgccccgtc aacgtatcgt catccgccat cgtcatttct ccttgaaatc tcattcgagc
     1321 gccgcgctca cgagacccgg ccatagcgcc tcgatgtccg tgcccacggt ccgcgctcgg
     1381 agcttcgcgc cgagccgtcg cgcctggtcg gccgagaagt ggttcgccca atcgcccacg
     1441 attcccttgc gcacgaactc cggcatgcct tcgggtcgtc ggctcgacca gcggtcctgg
     1501 ttctgccgca tctcgccgaa gctgctgtcg cgcacgacgc cggccagccg ccgctcgtcg
     1561 cgcgcaaggt cgcgtgcggc cccgcccagg aaacccgcga gcgcctcgac cgcggccgcg
     1621 ggatccgcga gcatgctttc atacgtgagg aacagcacgt tcggctcgcg acgcaatggc
     1681 caccacgacg tgaggttatc gaagtagtcg ccgaaatcca cgtcgccggc caagaagcac
     1741 tcgaaaaacg tctcccacgt gccggccgcg aaatcgtagt ggcgcacgaa cc
//
LOCUS       DATCUD010000710         2044 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_99371, whole genome shotgun sequence.
ACCESSION   DATCUD010000710 DATCUD010000000
VERSION     DATCUD010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99371"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..875
                     /locus_tag="VIQ99_10300"
     CDS             <1..875
                     /locus_tag="VIQ99_10300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183582.1"
                     /translation="LTADGQPNLQGHWSNDTYTPLERAAELGEQEFYTPEQAAAFFKS
                     RQDDLHGQAEDDIHYDDAIWQAENYDKVVHLRTSLITSPSNGRLPPLTATGAARLPQQ
                     RATQRANTAAVGARSRSLGERCISWGNVGPPMMPPTYNANLQILQAPGLVVIRHEMMH
                     DVRLIYLDGRAHPAPSVQWMAGHSVGRWEGQTLVVDTTNFTPQTNFRGSPQNTRQDIF
                     GTERMHVVERFTPTGADTIRYEFTVEDPDTWTTPWSGEMEIRRVEGPIYEYACHEGNY
                     GLANILSAIAAGAK"
     gene            complement(880..1599)
                     /locus_tag="VIQ99_10305"
     CDS             complement(880..1599)
                     /locus_tag="VIQ99_10305"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010942220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY9183583.1"
                     /translation="MASAQQHYDELLAPIYVWMAGGLPAALAAGAQDVAGLVPGQGLA
                     LDLGAGFGMHAIPLARGGYHVVAIDTSPQLLDVLRAQSAGLSIRVIEDDLLDFRRHIV
                     APASLIVCLGDTLTHLAKPADVERLCREIAASLAPGGRAVLTFRDYTRPAEGIARFIP
                     VRSDADRIHTCFLEQQGDHLLVHDIVHERDGAKWRMKVSCYPKLRLAPDAVAAMLRNA
                     GLEPTVAAGPRGMTAITAVCV"
     gene            complement(1615..>2044)
                     /locus_tag="VIQ99_10310"
     CDS             complement(1615..>2044)
                     /locus_tag="VIQ99_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018902808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9183584.1"
                     /translation="NGGDEVNLILPGRNYGWPTYTYGRNYDGTKMSAMPIVDGIEQPL
                     VLWVPSIAPTGIAVYTGDKIPAWKNNLFVGSARIGEIPRTGGLERVVLNDTLGEVRRE
                     RLLGDLHQRIRDVRQGPDGLLYVITDEDDGALLRIEPASL"
BASE COUNT          361 a          714 c          673 g          296 t
ORIGIN      
        1 cgctgacggc cgacggtcag ccgaacctgc agggacactg gagcaacgac acgtacacgc
       61 cgctcgagcg cgccgccgag ctcggcgagc aagagttcta cacgccggag caagcggccg
      121 cgttcttcaa gtcgcggcag gacgatctgc acgggcaagc cgaggacgac atccactacg
      181 acgacgcgat ctggcaggcc gaaaactacg acaaggtcgt gcatctgcgc acgtcgctga
      241 tcacgagccc cagcaacggc cggttgccgc cgctgacggc gaccggtgca gcgcgattgc
      301 cgcagcagcg cgccacgcaa cgcgcgaaca ccgcggctgt cggcgcccgg agccgctcgc
      361 tcggcgagcg ctgcatctca tggggcaacg tgggtccgcc gatgatgccg ccgacctaca
      421 acgcgaattt gcagatcctc caagctccgg gcttggtcgt gatccgccac gagatgatgc
      481 acgacgtgcg cctgatctat ctcgacggcc gggcccatcc ggcgccgagc gtgcagtgga
      541 tggcgggcca ttcggttggc cgctgggagg gccagacgct cgtcgtcgac acgacgaact
      601 tcacgccgca gacgaacttc cgcggctcgc cgcagaacac gcgccaagac atcttcggaa
      661 ccgagcgcat gcacgtcgtc gagcgcttca cgccgacggg ggccgacacg attcgctacg
      721 agttcacggt cgaggatccc gacacgtgga cgacgccgtg gtccggcgag atggagatcc
      781 ggcgcgtcga gggcccgatc tacgagtacg cgtgccacga gggcaactac ggcctcgcga
      841 acatcctgag cgcgatcgcg gcaggagcga agtgacgcgc tagacgcaga ccgccgtgat
      901 cgccgtcatc ccgcgcggcc cggcagccac ggtcggctcg aggccagcgt tccgcagcat
      961 cgccgccacc gcatcgggtg cgagcctgag cttcgggtag cagctcactt tcatccgcca
     1021 cttcgcgcca tcgcgctcgt gcacgatatc gtgaaccagc aggtggtcgc cctgctgctc
     1081 caggaagcac gtgtgaattc gatccgcgtc gctgcgcacg ggaatgaacc gcgcgatacc
     1141 ctccgccggc cgcgtgtagt cgcgaaacgt gagcactgcg cggccaccgg gcgcaaggct
     1201 cgccgcgatc tcccggcaca gccgctcgac gtcggccggc ttcgcgagat gcgtgagcgt
     1261 atcgccgaga cacacgatca ggcttgcggg cgcgacgatg tgccgccgga agtcgagcaa
     1321 gtcgtcctcg atcacgcgga tcgatagtcc tgcgctctgc gcgcgcagca cgtcgagcag
     1381 ctgcggggac gtgtcgatcg cgacgacgtg gtagccgccg cgcgcgagcg ggatcgcgtg
     1441 catgccgaat cctgcgccga gatcgagggc aaggccctgc cctggcacga gcccagccac
     1501 gtcctgagca cctgccgcga gcgcggccgg aagcccgccg gccatccaga cgtagatagg
     1561 cgccaacaac tcgtcgtaat gctgctgcgc gctggccacg cgagagcgct tgcgctacag
     1621 cgacgcgggc tcgatgcgca gcagcgcacc gtcgtcctcg tccgtgatca catacagcaa
     1681 gccgtccggg ccttgccgca cgtcgcggat gcgctggtgc aagtcgccga gcagccgctc
     1741 acggcggact tcgcccaagg tgtcattcag cacaacacgc tcgaggcctc ccgtgcgcgg
     1801 gatctcgccg atccgcgcgc tgccgacgaa cagattgttc ttccacgccg gaatcttgtc
     1861 gccggtgtag accgcgatgc cggtcggcgc gatcgacggc acccacagca cgagcggctg
     1921 ctcgatgccg tcgacgatcg gcatcgccga catcttcgtg ccgtcgtaat tgcggccgta
     1981 ggtgtaggtc ggccagccgt agttacggcc cggcagaatc agattgacct cgtcgccgcc
     2041 gttc
//
LOCUS       DATCUD010000711         5015 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78071, whole genome shotgun sequence.
ACCESSION   DATCUD010000711 DATCUD010000000
VERSION     DATCUD010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5015
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78071"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VIQ99_10315"
     CDS             <1..256
                     /locus_tag="VIQ99_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017365661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY9183585.1"
                     /translation="PAPIRTIGSYWPYATTVFDYVRRAMPYVTPHSLTPDETYALTAY
                     LLALNNVIGQNDVMDATTLPKVVMPNRANFDSAYREPRRR"
     gene            complement(263..619)
                     /locus_tag="VIQ99_10320"
     CDS             complement(263..619)
                     /locus_tag="VIQ99_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011633548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
                     /protein_id="HEY9183586.1"
                     /translation="MRNIGFTILLLGLSNIFMTFAWYAHLKELNNRPWIVAALVSWGI
                     AFFEYMLQVPGNRIGYTVLSVGQLKLIQEVITLTVFVPFAVFYLKEPLKLDYLWAALC
                     ILGAVYFVFRSKVAGV"
     gene            701..2518
                     /locus_tag="VIQ99_10325"
     CDS             701..2518
                     /locus_tag="VIQ99_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010549042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY9183587.1"
                     /translation="MAEHSSDRPKGKSLKPLRALAPFIAPHWRVLTFALTALVVAAAA
                     QLALPVALRYLIDEGLAVRDAATINRYFVFFLAAAVVFGAFAALRYYLVTWLGERVVA
                     DVRNAVYAKVVRMDPTFFEVTRTGEVLSRLTADTTLVQSISGVGISITLRSTLTLLGS
                     LVMLVATSPMLTLMIVALMPLIVGPLIMLGRRLRRLSRDSQDRVADASALAGETINAV
                     QTVQAFNLEPLQTRRFRDAVEHSFSVAVRRNKLQGLLTALGTTFVFGAITFVLWIGAR
                     QVLAGTLTFGQLSQFLVYAGYMGIAAASLSEMWNQVQRAAGAMERLIELAEAEPTIKA
                     PPQPLELPRPVRGRIQFEHVRFRYPSRPDSAALDDFTLTIEPGETVAFVGPSGAGKST
                     TFQLLLRFYDPTEGRVLIDGVDIAQADPERVRQLIGLVPQDTVLFGASARENIRYGRP
                     DAGDAEIEAAARAAEADEFVRALPQGYDTFLGERGTRLSGGQRQRVAIARAILKDPPI
                     LLLDEATSSLDAENELLVQQALEKLMRQRTTIIIAHRLATVLEADRIVVMDAGRVVAI
                     GTHTELLAVSPLYARLAELQFGAAGTPEVEERSRAALVR"
     gene            2499..3374
                     /locus_tag="VIQ99_10330"
     CDS             2499..3374
                     /locus_tag="VIQ99_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008213605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY9183588.1"
                     /translation="MRLWSVEGNTQRLDGGAMFGNVPRNLWAQWLTPDAENRLEFACR
                     CLLVEDLEGRTVLFETGIGAFFEPKLRARYGVHQDEHVLLRSLEARGVRQEDVDAVVL
                     SHLHFDHAGGLLGAFEESRPRELLFPRARFIVGKAAWARACAPHPRDRASYIPELPEL
                     LRKSARLEILDRPHSTLLGAAVRFDFSDGHTPGLMLAEIGGEGGVAFCSDLIPGRPWV
                     HLPVTMGYDRYPELLIDEKQRYLTDKIARGVRLFFTHDRECAAALPVRGADGRFGVTA
                     EQRTLEGEQIESRRS"
     gene            3431..4939
                     /locus_tag="VIQ99_10335"
     CDS             3431..4939
                     /locus_tag="VIQ99_10335"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY9183589.1"
                     /translation="MDVRSWAVGAVLLSAAVGAQAQITNNPLPVRVVKNGLAVEVRDV
                     VRLPETRQLRPVDQDVTPTGWARVSFVRNSPDGRLFANDSRGFLYIVNGNRTSLYADV
                     AKEFPHAWYARLESGFIAFTFHPEFARNGLWYSVHLERAEGNPATPDFIPPGYGPSDV
                     TFHNVITEWKTNDPPANTFSGSRRELLRVAHVVQFLSHPLGAVEFNPTARPGSPDYGL
                     LYTSGSDLGFSNGGGPNANNPSATQRLDSVVTAILRIDPRSPRESGGAKGLGDYTIPA
                     DNRFQADGDPKTLGEIYAYGFRNAHRLSWDLTDGTMYVGDIGMNHIEEINIVRNGGNY
                     GWMKREGFFENGMIREGGALNQLYELPGDVLRGRNRDEFTYPVAIYDHDEGVAITGAF
                     AYHGRIEALRGKLIFGDVNRGRLFAADLAAVKAADDGVPETVAPIEEIQLYVRGPSGQ
                     RIYTSFRELVEGTLGTSLSRTDLHLGQGRDGEIFITSRQDGMIRQLVADSGR"
BASE COUNT          825 a         1638 c         1711 g          841 t
ORIGIN      
        1 gccggcaccg atccgcacga tcggctcgta ctggccgtac gcgaccacgg tgttcgacta
       61 cgtgcgccgc gcgatgccgt acgtgacgcc gcattcgctg acgcccgacg agacctacgc
      121 gttgaccgcg tacttgctcg cgttgaacaa cgtgatcggc cagaacgacg tgatggacgc
      181 gacgacgcta ccgaaggtcg tcatgccgaa tcgcgcgaat ttcgactccg cgtatcgcga
      241 gccgcggcgg cgctgagcgc tgtcagactc ctgcgacctt gctgcggaac acgaaataca
      301 cggcgccgag aatgcagagc gcggcccaga ggtagtcgag cttcagcggc tccttcaaat
      361 agaacaccgc gaacggcaca aataccgtga gcgtaatgac ttcctgtatc agcttcagct
      421 ggccgacgga cagcaccgtg tagccgatcc ggttgccggg cacttgcagc atgtactcga
      481 agaacgcgat gccccagctc acgagcgccg cgacgatcca cggccggttg ttgagctcct
      541 tcaagtgcgc gtaccacgcg aaggtcatga aaatgttgct gagtccgagc agcaggatcg
      601 tgaagccgat gttgcgcatg gcgtaggaac ccgagaatcc gcgaccgcgc caagtatcgc
      661 acggcgccag ccgctacccc gttcgcgcta agcttcgcct atggccgagc actcgtccga
      721 tcgcccgaag ggcaaatcgc tgaaaccgct gcgcgcgctg gcgccgttca tcgcgccgca
      781 ttggcgcgtg ttgacgttcg cattgacggc gctcgtggtc gcggccgctg cacagctcgc
      841 gctgcccgtc gcgctgcgct acttgatcga cgaagggctc gcggtccgcg atgccgcgac
      901 gatcaaccgc tacttcgtgt tctttctcgc ggccgcagtc gtgttcggtg cgtttgcggc
      961 gctgcggtac tacctcgtca cgtggctcgg cgagcgcgtc gttgcggacg tgcgcaacgc
     1021 cgtgtacgcg aaagtcgtgc gcatggaccc cacgttcttc gaggtcacgc gcacgggcga
     1081 ggtgctgtcg cggctcacgg ccgacacgac gctcgtgcag tcgatctcgg gcgtcggcat
     1141 ctcgatcacg ctgcgttcga cgttgacgct gctcggctcg ctcgtgatgc tggtggccac
     1201 gagcccgatg ctgacgttga tgatcgtcgc attgatgccg ctgatcgtcg ggccgttgat
     1261 catgctcgga cgacggctgc gccgcctgtc gcgcgactcg caagatcgcg tggccgacgc
     1321 gagcgcgctg gccggggaaa cgatcaacgc tgtgcaaacg gtccaggcgt tcaacctcga
     1381 gcccctgcag acgcggcgct ttcgcgacgc cgtcgagcac tcgttctcgg tagccgtgcg
     1441 acggaacaag ctgcaagggt tgctcacggc gctcggcacg acgttcgtgt tcggtgcgat
     1501 cacgttcgtg ctgtggatcg gtgcgcgtca ggtgttggcc ggcacgctca cgttcgggca
     1561 gctcagccag ttcctcgtgt atgcgggcta catgggcatc gcagccgcgt cgctgtccga
     1621 gatgtggaac caggtgcagc gtgcggccgg cgcgatggag cggctgatcg agctcgccga
     1681 ggccgagcct acgatcaagg cgccgccgca gccgctcgag ctgccgcgcc ccgtgcgggg
     1741 ccgaattcag ttcgagcacg tacggttccg ctatccgtcg cgtccggaca gcgccgcgct
     1801 cgacgacttc acgctgacga tcgagcccgg cgagacggtg gcattcgtcg ggccgtccgg
     1861 cgcaggcaag agcacgacgt tccagctgct gctccggttc tacgacccaa cggaaggccg
     1921 cgtgctgatc gacggcgtcg acatcgcgca ggcggatccc gaacgcgtac ggcagctgat
     1981 cggcctcgtg ccgcaagaca cggtgctgtt cggcgcgtcc gcgcgcgaga acatccgcta
     2041 cggccgaccc gacgccggcg acgcggagat cgaggccgcc gcgcgcgccg ccgaagccga
     2101 cgagttcgtg cgagccctgc cgcagggcta cgacacgttc ttgggcgagc gcggcacgcg
     2161 cctatcgggc ggccaacggc agcgcgtcgc gattgcgcgc gcgatcctga aggatccgcc
     2221 gatcctgctg ctcgacgaag cgactagctc gctcgacgcc gagaacgagt tgctcgtgca
     2281 acaggcgctc gagaagctca tgcgccagcg cacgacgatc atcatcgcgc atcgcctcgc
     2341 caccgtgctc gaggcggatc gaatcgtggt catggatgcc ggccgcgtgg tcgccattgg
     2401 cacccacacg gagctgctcg cggtgagccc gttgtacgcg cgcctcgcgg agctgcagtt
     2461 cggtgcggca ggcacacccg aggtcgagga aaggtcccgt gcggctctgg tccgttgaag
     2521 gtaacaccca gcgcctcgac ggtggcgcga tgttcggcaa cgtgccgcgc aatctctggg
     2581 cgcagtggct gaccccggac gccgagaacc ggctcgagtt cgcgtgtcgc tgcctgctcg
     2641 tcgaggacct cgagggtcga acggtgctgt tcgagaccgg gatcggcgca ttcttcgagc
     2701 cgaagctgcg cgcgcgctac ggcgtgcatc aggacgagca cgtgctgctg cggtcgctcg
     2761 aggcgcgcgg cgtgcgtcaa gaggacgtgg atgccgtcgt gctgagccac ttgcacttcg
     2821 atcatgccgg tgggttgctc ggtgcattcg aagaatcgcg tccgcgggag ctgctgtttc
     2881 cgcgagcacg cttcatcgtc ggcaaggcgg catgggcgcg cgcgtgcgcg ccgcatccgc
     2941 gcgacagagc gtcgtacatc ccggagctgc cggagctgct gcgcaagagc gcgcggctcg
     3001 agatcctcga tcgcccgcat tcgacgctgc tcggggcggc cgtccgcttc gacttcagcg
     3061 acggccacac gcccgggctc atgctggccg agatcggcgg cgagggtggc gtcgcgttct
     3121 gctcggacct gatcccgggg cgcccgtggg tgcatctgcc cgtgacgatg ggctacgacc
     3181 gctaccccga gctcctgatc gacgagaagc agcgctacct gacggacaag atcgcacgcg
     3241 gcgtgcgctt gttcttcacg cacgaccggg agtgtgcggc cgcgttgccc gtgcgcggcg
     3301 ccgacggccg gttcggcgtg acggccgagc agcgcacgct cgaaggcgag cagatcgaga
     3361 gccggcgctc ttgaccctgc ccggacgcaa agcgattctt ggcgctcgtg tctttcgagg
     3421 ggggagcatc gtggacgtga gatcgtgggc cgtcggcgca gtgctgttgt cggccgccgt
     3481 gggtgcgcaa gcgcagatca cgaacaaccc gctgccggtg cgtgtcgtga agaacgggct
     3541 cgcggttgag gtgcgggacg tggtgcgact gcccgagacg cggcagcttc ggcccgtcga
     3601 tcaggacgtc acaccgaccg gctgggcgcg cgtcagcttc gtccggaatt cgccggacgg
     3661 ccgattgttc gcgaacgact cgcgcggatt cctgtacatc gtgaacggca accgcacgtc
     3721 gttgtatgcg gacgtcgcca aggagtttcc gcacgcgtgg tacgcgcggc tcgagagcgg
     3781 cttcatcgcg ttcacctttc atcccgagtt cgcacgcaac ggcttgtggt acagcgtgca
     3841 tctcgagcgg gccgaaggaa atccggccac gccggatttc attccgcccg gatatgggcc
     3901 gagcgacgtg acgttccaca acgtgatcac cgagtggaag accaacgatc cgccggcgaa
     3961 cacgttctca ggatcacgcc gcgagctctt gcgcgtcgcg cacgtcgtgc agttcttaag
     4021 ccatccgctc ggtgcggtgg agttcaatcc gacggcgcgg ccgggctctc cggactatgg
     4081 gctcctgtac acgagcggca gcgacttggg cttcagcaac ggcggcggcc cgaacgcgaa
     4141 caacccgagc gcgacgcaac ggttggattc cgtggtcacg gcgatcctgc ggatcgaccc
     4201 gcgcagcccg cgcgagagcg gcggtgcgaa agggctcggc gactacacga ttcccgccga
     4261 caaccggttc caggccgacg gcgatccgaa gacgctcggc gagatctacg cgtacggctt
     4321 tcgcaacgcg caccggctgt cgtgggatct gaccgacggc acgatgtacg tcggcgacat
     4381 cggcatgaat cacatcgaag agatcaacat cgtcaggaac ggtggcaact acggctggat
     4441 gaagcgcgaa ggcttcttcg agaacggcat gatccgcgag ggcggggcgc tgaaccagct
     4501 gtacgagctg cccggtgacg tgctgcgcgg ccgcaatcgc gacgagttca cgtatccggt
     4561 cgcgatctac gaccacgacg agggcgtcgc gatcacgggc gcgttcgcgt atcacggtcg
     4621 catcgaagcg ctgcgcggca agctgatctt cggcgacgtg aatcgcggtc ggttgttcgc
     4681 ggccgatctc gcggccgtga aggccgccga cgacggcgtt ccggagaccg tcgccccgat
     4741 cgaggagatc cagctgtatg tgcgcgggcc ttcggggcag cggatctata cgtcgttccg
     4801 cgagctcgtc gagggcacgc tgggcacgtc gctgtcgcgg accgacctgc acttgggtca
     4861 aggccgcgac ggcgagatct tcatcacgtc gcgccaggac ggcatgattc gccagctcgt
     4921 cgccgactcg ggccgctgat accaacggga gactctcgat ggccgaaaat ccgtacgcag
     4981 ctccgaagac gcgcgtcgag gatgcgccga ccgtg
//
LOCUS       DATCUD010000712         2267 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_84986, whole genome shotgun sequence.
ACCESSION   DATCUD010000712 DATCUD010000000
VERSION     DATCUD010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84986"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..446
                     /locus_tag="VIQ99_10340"
     CDS             <1..446
                     /locus_tag="VIQ99_10340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183590.1"
                     /translation="ILGFPTILFLHTLGLAMVAGSSIAIDLWILQRGKLAMPISIAGL
                     NKTMWLGFGINTLSGIALLLAYPAKALTNGVFYLKMALVVLAVYIAARIHRDLLPTDA
                     PRVAAGVPRQAQTWAVASLFCWFAAIVTGRLLAYTHNVLFASQLP"
     gene            443..931
                     /locus_tag="VIQ99_10345"
     CDS             443..931
                     /locus_tag="VIQ99_10345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6644 family protein"
                     /protein_id="HEY9183591.1"
                     /translation="MTLPDVIAWLTSTPINTLVMDYRWTWPISESLHFCGLALMVGTV
                     GTFDLRLLGLVKGLSPAALHRSIRFGLAGFVISMITGALFIFGQPDQYFYNDAFKVKV
                     VCLILLGINVCAFYGLEARRVLALGAGEDAPFRAKTIAAISLTLLVAIMCAGRMLTFF
                     RP"
     gene            999..1925
                     /locus_tag="VIQ99_10350"
     CDS             999..1925
                     /locus_tag="VIQ99_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012079476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183592.1"
                     /translation="MQSIISIKDLTKTYASGFEALKRTNLEIRRGEIFGLLGPNGAGK
                     TTLINIVCGIVNASGGTISVGGHDIRKNTRAARDLIGLVPQELATDAFETVWATTTFS
                     RGLFGKPKSAEYCEKVLRSLSLWDKKDSKIMTLSGGMKRRVMIAKALAHEPQVLFLDE
                     PTAGVDVELRQDMWNVVRGLQASGVTIILTTHYIEEAEQMADRIGVINRGEIILVEQT
                     AELMRKLGKKQMTLQLHARLELLPASLAQFPLELHADGHELVYTYDTRGDRTGITTLL
                     SALAEAGIRFKDLSTTQSSLEEIFVSLVRRQA"
     gene            1922..>2267
                     /locus_tag="VIQ99_10355"
     CDS             1922..>2267
                     /locus_tag="VIQ99_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011043870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY9183593.1"
                     /translation="MNWHAVHAIYHFEMARMFRTVVQSIVAPVLSTSLYFVVFGSAIG
                     SRIQEVDGTSYGAFIVPGLIMLSLLTESIGNASFGIYFPRFTGTIYEVLSAPVSAAEV
                     ILGYVGAAATKSV"
BASE COUNT          393 a          715 c          715 g          444 t
ORIGIN      
        1 cgatcttagg ctttccaacg atcctgttcc tgcacacgct cggcctcgcg atggtcgccg
       61 gcagctccat cgcgatcgat ctttggatct tgcagcgcgg gaagctagca atgcctatct
      121 cgatcgcggg cctgaacaaa acgatgtggc tcggattcgg gatcaacacg ctgtcgggca
      181 tcgcgctgct gctcgcctac cctgcgaagg cgctcacgaa cggtgtgttc tacttgaaga
      241 tggccttggt cgtgctggcc gtgtacatcg cggcgcgaat ccatcgcgac ctcttgccga
      301 cggatgcccc ccgcgtggcc gccggcgttc cacggcaagc gcaaacgtgg gccgtggcgt
      361 cattgttctg ctggttcgcc gcgatcgtaa ccggccgatt gctggcctat acgcacaacg
      421 tgctattcgc gagtcagctg ccgtgacgct acccgacgtc atcgcatggc tgaccagcac
      481 gccgatcaat acgctcgtga tggattaccg ctggacctgg cccatcagcg agagcctgca
      541 cttctgcggg ctcgcgttga tggtcggcac cgtcggcacc ttcgacctgc ggctgctggg
      601 tctcgtgaag gggttgtcgc cggccgcgct gcaccggtcg attcgcttcg ggctcgcggg
      661 cttcgtgatc tcgatgatca ccggcgcgtt gttcatcttc ggccagccgg atcagtactt
      721 ctacaacgac gcattcaagg tcaaggtcgt ctgcttgatc ctgctcggga tcaacgtctg
      781 cgcgttctac gggctcgaag cgcggcgggt gctcgcgctc ggcgcaggcg aagacgcccc
      841 ctttcgagcc aagacgatcg ccgcgatctc gttgaccctg ctggtcgcga tcatgtgcgc
      901 gggacgaatg ctgacgttct tccggccgta gcccggctgg tccgcttgtc acggcccgcg
      961 cgatccatat catgagcgct ccatctcgcg agcgccccat gcaatcgatc atttcgatca
     1021 aggatctgac gaagacctat gcatccggct tcgaagcgct gaaacgcacg aatctcgaga
     1081 tcaggcgcgg cgagattttc ggattgctgg gcccgaacgg cgccggcaag acgacgctga
     1141 tcaacatcgt ctgcggaatc gtgaacgcga gtggcggcac gatctcggtt ggcggccacg
     1201 acatccgcaa gaacacacgc gcggcgcgcg acctgatcgg gctcgttccc caagagcttg
     1261 cgaccgatgc gttcgagacc gtgtgggcga ctacgacatt cagccgcggc ctgttcggca
     1321 agccgaagag cgccgagtac tgcgagaagg tgctgcgctc gctgtcgctg tgggacaaga
     1381 aggacagcaa gatcatgacg ctgtcgggcg gcatgaagcg ccgcgtcatg atcgcgaagg
     1441 cgctcgcgca cgagccgcag gtgttgttcc tcgacgagcc gacggccggc gtcgacgtcg
     1501 agctgcgcca agacatgtgg aacgtcgtca gggggcttca ggcgtccggg gtcacgatca
     1561 ttttgacgac gcactacatc gaagaagccg agcagatggc cgaccgtatc ggcgtcatca
     1621 atcgcggcga gatcatcctc gtcgagcaga ccgccgagct catgcgcaag ctcggcaaga
     1681 agcaaatgac gctgcagctg catgcgcggc tcgagctgct gcccgcgtcg ctggcgcagt
     1741 ttccactcga gctgcatgcg gacggtcatg agctcgtgta tacctacgac actcgcggcg
     1801 accgcaccgg aatcacgacg ctgttgtccg cgctcgccga agccggcatc cgcttcaagg
     1861 atctctcgac tactcagagc tcgctcgagg agatcttcgt gagcctcgta cggaggcaag
     1921 catgaactgg cacgcggtcc atgcgatcta ccatttcgag atggcgcgga tgttccggac
     1981 ggtcgtgcag agcatcgtgg cgccggtgct gtcgacgtcg ctgtacttcg tcgtattcgg
     2041 ctcggcgatc gggtcgcgga tccaggaagt cgacggcacc agctacggcg cgttcatcgt
     2101 gcccggcttg atcatgttgt cgctgctgac cgagagcatc ggcaacgcgt cgttcggcat
     2161 ctatttcccg cgtttcacgg gcacgatcta cgaagtgctc tcggcgccgg tgtcggccgc
     2221 cgaggtcatc ttgggctacg tcggcgcggc cgcgacgaaa tccgtgc
//
LOCUS       DATCUD010000713         1765 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42336, whole genome shotgun sequence.
ACCESSION   DATCUD010000713 DATCUD010000000
VERSION     DATCUD010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1765
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42336"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..310)
                     /locus_tag="VIQ99_10360"
     CDS             complement(<1..310)
                     /locus_tag="VIQ99_10360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007423089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY9183594.1"
                     /translation="MIAAEFKALLDAAVDAIVVIDDRGQVVTFNRAAERMFGYAASDV
                     LGKDVSMLMGDPHRSQHGQYLERYLSTGAPRVIGKGREVEARRANGESFPVSLAVGEA
                     S"
     gene            445..1386
                     /locus_tag="VIQ99_10365"
     CDS             445..1386
                     /locus_tag="VIQ99_10365"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9183595.1"
                     /translation="MAKPKKLLVVVDPTASFHPAIERASWFARHAAAHIELFISDYVP
                     HLADSRSNRSSAAQAKAAVLDRHRQRLQQLAAPLREAGLTVDIDVRWDYPLHDSIVRK
                     AVDSGADLVIKDTHFHSVLKRSIFSNTDWSLIRNCGATLWLVKPRPPGQKPCFVAAVD
                     PLHERDKPAELDNRILRTAKEMSGMLGGEVHVFHAYDVMAAIAISTDSMTMPIALPVN
                     DLADAMRAEHTDAVERLCKDHGVPAERTHIHQGGTRPLLMALTEQLRADAVVMGAISR
                     SGLKGLFLGNTAEDVLDRLHCDLVIVKPEGFKAILPS"
     gene            1399..>1765
                     /locus_tag="VIQ99_10370"
     CDS             1399..>1765
                     /locus_tag="VIQ99_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HEY9183596.1"
                     /translation="MPVKQVLFRSAAREKVLRGATQLADAVRITLGPKSKSVLIQKKW
                     GVPVVCNDGVTIAKEMELEDPEENLGAQMLRQAAEKTGDAVGDGTSTATILAHAIFAE
                     GVRNVAAGASAIDLKRGLDR"
BASE COUNT          335 a          595 c          558 g          277 t
ORIGIN      
        1 cggaggcttc gcccacggcc aacgacacgg ggaacgactc gccattggcg cggcgcgcct
       61 cgacctcgcg tcccttgccg atcacgcgcg gggcgccggt cgagaggtag cgttccaggt
      121 actgcccatg ctgcgaccga tgcgggtcgc ccatcagcat gctgacgtcc ttgccaagca
      181 cgtccgaagc cgcgtaaccg aacatgcgct cggcggcccg attgaaggtg accacttgcc
      241 ctcggtcatc gatcacgacg atcgcgtcga ccgcagcatc gaggagggct ttgaactctg
      301 ccgcgatcat tggcgcgtat tcagcggtcg cagcacatcg cgggccatac gtactttccg
      361 aatcgctcta ggcgtttgag cgagcactcc ttcgcccgag gaggcagtat aaagaacgcg
      421 ccaacagcca atcagaggtg cagagtggcc aagccgaaaa agctgctcgt cgttgtcgac
      481 cccacggcga gcttccaccc cgcgatcgag cgtgcaagct ggttcgcccg gcacgctgcg
      541 gcccacatcg agttgttcat cagcgactac gtgccccacc tggccgactc gcgctcgaac
      601 cgatcgtcgg ctgcccaggc caaggcggcc gtgctcgatc ggcatcgcca gcgtctgcag
      661 caactcgcgg cgccgctgcg cgaggcgggt ctgaccgtgg acatcgacgt gcgatgggat
      721 tacccacttc acgacagcat cgttcgcaag gccgtggaca gcggggccga cctcgtcatc
      781 aaggacacac acttccattc ggttctgaag cgctcgatct tctcgaacac cgactggagc
      841 ctgatccgga actgcggggc cacgttgtgg ctcgtcaagc cccggccgcc cggccaaaaa
      901 ccttgcttcg tggccgccgt cgatccgctt cacgagcgcg acaagccggc cgagctcgac
      961 aaccgcattc tgcgcaccgc gaaagagatg agcggcatgc tgggcggaga ggtgcacgtg
     1021 tttcatgcct atgacgtcat ggccgcgatc gccatctcca cggactcgat gacgatgccg
     1081 atcgcgctgc ccgtcaacga cctcgcggac gcgatgcggg ccgagcacac cgatgcggtg
     1141 gagcgtctct gcaaggacca cggcgtccct gcggagcgca cgcacatcca tcagggaggt
     1201 acgcggccgc tgctgatggc actgaccgag cagctgcgag ccgatgccgt cgtgatggga
     1261 gcgatctcgc gcagtgggtt gaaaggcctg ttcctcggca acacggccga ggacgtgctg
     1321 gatcggctgc actgcgacct cgtaatcgtg aagcccgagg gcttcaaggc catcctgccg
     1381 agctgaaacg gtacccacat gccagtcaaa caagtgctgt tccgctccgc ggcgcgcgag
     1441 aaggtcctgc gcggcgctac ccaactcgcc gacgccgtgc gcatcacgct cggccccaaa
     1501 tcgaagtcgg tgctcatcca gaagaaatgg ggcgtgccgg tcgtgtgcaa cgacggtgtc
     1561 accatcgcca aggagatgga gctcgaggac cccgaggaga atctcggagc gcaaatgttg
     1621 cgtcaggcgg ccgagaagac cggcgacgcc gtcggcgacg gcaccagcac cgcgacgatc
     1681 ctcgctcacg cgatcttcgc cgaaggcgtt cgcaacgtcg cagcgggcgc cagcgcgatc
     1741 gacctgaaac gaggcctgga ccgcg
//
LOCUS       DATCUD010000714         4879 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21079, whole genome shotgun sequence.
ACCESSION   DATCUD010000714 DATCUD010000000
VERSION     DATCUD010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 4879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4879
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21079"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..834)
                     /locus_tag="VIQ99_10375"
     CDS             complement(34..834)
                     /locus_tag="VIQ99_10375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183597.1"
                     /translation="MRTTTLLAYAIALTTWAVSGSAFGQGTADSAEPAPTPRLPDGTV
                     DLGGDGIWDQPWITDFGKQLVGRPEGQIPFLPWTKAMYDYNKSNQVAYDPQGFCLPPG
                     GPRMFGTPYPSEFIQDDDRIVVIFEGGAHVWREIHMDGRPLPKREDLNPTYFGYSVGR
                     WEGDTLVVETTGFNEKTWLNFNGTMHTDELYTVERISRPNRDTLHYEATITDPGAYSE
                     PWTVAWDIPWLEGAELAEYICQENNKFLLELKDDFGNPFFEDIPTDKP"
     gene            complement(845..1249)
                     /locus_tag="VIQ99_10380"
     CDS             complement(845..1249)
                     /locus_tag="VIQ99_10380"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183598.1"
                     /translation="MQRNFTALLVAAMTAGVAQPTAAHHSFAAEFDANSPIELTGTVT
                     KVEWANPHTFFYIDVTTPSGEIENWALEMGSPNGLMRRGWTRDSMKLGDVVTVRGSRA
                     KDGSTKGNARSVTLSTGKRLFAGSSQENAEAN"
     gene            complement(1270..1668)
                     /locus_tag="VIQ99_10385"
     CDS             complement(1270..1668)
                     /locus_tag="VIQ99_10385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183599.1"
                     /translation="MTRSAFLALLAAMTLVTAALAQVGHPAKGSWSGYWGTSAASKRR
                     ILLALDWRDRQITGVINPGPNQVPIDKADLDVDTWTLRLEAAMPTSGGGKAPFVATGQ
                     LTNLGSWTTRTYSGTYVFGAETGRFTVTLN"
     gene            complement(1767..2546)
                     /locus_tag="VIQ99_10390"
     CDS             complement(1767..2546)
                     /locus_tag="VIQ99_10390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183600.1"
                     /translation="MKSSRLVSSVLAAAAIAIGMTTQSSAQDVPRMADGKPDFSGIYS
                     PPSTVNATGPRGNLIFNADKMAPVKPGAEGLLYEARNGDPRHDEPRAMCLPAGFPSGM
                     LYILPIQIVQNPKTIVIIPELQRAARIIPTDGRPHREGIEPSYYGDSVGKWEGDTLVI
                     DTVNFKRWILDDYHYTDPTKTRWHSDELHTIERLTRDGNTLRYQITIDDPKIFTRPFS
                     QDFELTLRPDWEPLGLLEYVCEENNRCAGGNCRPSDAQLPR"
     gene            complement(2543..2929)
                     /locus_tag="VIQ99_10395"
     CDS             complement(2543..2929)
                     /locus_tag="VIQ99_10395"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183601.1"
                     /translation="MTRNLPAVFALIALTTPALGHHSETAEFDPDAPVKVTGTIVKVE
                     WLNPHVWFYVDVPDDKGNITTWGFSGAPPGALMRRGITKDALKLGAVVNVEGSRARDG
                     SNNASGRSVTFPDGRNVFTATQEGAR"
     gene            complement(3015..4598)
                     /locus_tag="VIQ99_10400"
     CDS             complement(3015..4598)
                     /locus_tag="VIQ99_10400"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase/lipase family protein"
                     /protein_id="HEY9183602.1"
                     /translation="MLTALSAGTLWRSGVAQEPRYIEAATTFGRVRGVDAGGIKTFKG
                     IPYGASTGGAARFRPPTNPAAWTGVRDALVYGPSAPQREPGVARTESGLGVAAANLPP
                     EGEDCLVLNVWTPAVGDARQRPVLFWCHGGGFVTGSGSSPVTDGTNLARRGDVVIVSI
                     NHRLNVLGFTHLAELGGSDFAQSGDVGMLDIVHALEWVRANIAEFGGDPDNVTIFGQS
                     GGGRKVATLLAMPSAKGLFHRAIIESGATIELVEPEQAARVARELLQELKLTPGQWRE
                     LQTVPLATLMSAYFATVRRMNVDQMTMGFSPTVDGTAVAQHPFHPQAAAISADVPLII
                     GSTRTELTSSANASEFSLDDASMRARVGELLGDSASRILDVYSRANPGASPSDLYFLI
                     ASDERYGAPVMKIAERRAALGRGPVYLYYFRWETPLEGGRYKAPHTVEIPFVFHNLDA
                     SPWTRGVPGAAPLADHVSDAWLAFARSGDPNTRGLPSWPAFDAKRRATMVFDTTSAVA
                     DDPLREQRLAMFAAKGLAT"
     gene            4708..>4879
                     /locus_tag="VIQ99_10405"
     CDS             4708..>4879
                     /locus_tag="VIQ99_10405"
                     /inference="COORDINATES: protein motif:HMM:NF014601.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY9183603.1"
                     /translation="MQKFEFAVLGAGAMGSILGAHLARAGHSVAMLARGRRAEQIRSE
                     GLRISGLIQLSAP"
BASE COUNT          810 a         1595 c         1607 g          867 t
ORIGIN      
        1 cgctaggccg gcgcttccgc ggcagcgcgc ggctcagggc ttgtcggtcg ggatgtcctc
       61 gaagaacggg ttgccgaagt cgtccttgag ctcgagcaag aacttgttgt tctcctggca
      121 gatgtattcc gcgagctcgg ctccctcgag ccacggaatg tcccacgcga ccgtccacgg
      181 ctccgagtaa gcgccggggt ccgtgatcgt cgcctcgtag tgcaacgtgt cgcggttcgg
      241 tcggctgatg cgctcgacgg tgtagagctc gtccgtgtgc atcgtgccgt tgaagttcag
      301 ccacgtcttc tcgttgaagc cggtcgtctc gacgaccagc gtgtcgcctt cccaacggcc
      361 gaccgaataa ccgaagtagg tcgggttcaa gtcttcgcgc ttcggcaacg gccgtccatc
      421 catgtggatc tcgcgccaga cgtgcgcgcc gccctcgaag atcacgacga tacgatcgtc
      481 gtcttggatg aattccgaag ggtacggcgt gccgaacatg cgcgggccgc cgggcggcag
      541 gcagaagccc tgcgggtcat aggccacctg gttcgacttg ttgtagtcgt acatggcctt
      601 cgtccacggc aggaacggga tctgcccttc ggggcggccc acgagctgct tgccgaaatc
      661 cgtgatccaa ggctggtccc agatgccgtc cccgccgaga tcgacggtgc cgtcagggag
      721 gcggggcgtg ggcgccggct cggccgaatc ggccgtgcct tgtccgaaag ccgaacccga
      781 gacggcccac gtggtcaacg cgatcgcgta agccagcagg gtggtggtgc gcacgtttgg
      841 atcctcagtt ggcctcggcg ttttcctggc tggacccggc gaacaggcgc ttacccgtcg
      901 acagcgtcac cgaccgagcg ttgcctttgg tgctgccgtc cttggcgcgc gagcccctca
      961 ccgtcacgac atcgccgagt ttcatcgagt cgcgcgtcca gccgcggcgc atcaagccgt
     1021 tcgggctgcc catctcgagc gcccaattct ctatctcccc gctgggagtc gtgacatcga
     1081 tatagaaaaa ggtgtgcggg ttcgcccact ccaccttcgt gaccgtgccc gtaagctcga
     1141 tgggactgtt ggcgtcgaac tccgcagcga acgaatggtg cgcggccgtc ggctgggcga
     1201 cccctgccgt cattgcggca accaggagcg cggtgaagtt cctctgcatg cttcgtcctc
     1261 gtaaggagct caattcaatg tcacggtgaa ccggccggtc tcggccccga acacgtacgt
     1321 gcccgaatag gtccgcgtgg tccacgagcc gagattcgtg agctggccgg tcgcgacgaa
     1381 aggagcctta ccgccgccgc tcgtcggcat ggcagcctcg aggcgcaagg tccaggtgtc
     1441 gacgtccaag tcggctttgt cgatcggcac ttggttgggg ccgggattga tgacgccggt
     1501 gatctgccgg tccctccagt cgagcgccag gagaatgcgc cgcttcgagg cagcgctggt
     1561 gccccagtag ccgctccagg aacctttcgc cgggtggccg acctgagcca gcgcggccgt
     1621 aacgagtgtc atggcagcca gcaacgcgag aaaagccgat cgtgtcatgc gtatcagcgc
     1681 gccgtgcgcg aacaagaatt ccagacgcga atatagcact gagactaccc gtcatcgaag
     1741 caacatcacg aaccgttgcg tgacggtcag cgcgggagtt gcgcatccga cgggcggcag
     1801 ttgccgccgg cgcagcgatt gttctcctcg cagacgtact cgagcaggcc cagcggctcc
     1861 cagtcggggc gcaacgtcaa ctcgaagtcc tgggagaacg gccgcgtgaa gatcttgggg
     1921 tcgtcgatcg tgatctggta gcgcaacgtg ttgccgtcgc gcgtcaggcg ttcgatcgta
     1981 tgcagctcgt cgctgtgcca gcgcgtcttc gtcggatccg tgtagtgata gtcgtcgaga
     2041 atccagcgct tgaagttgac cgtgtcgatg acgagcgtat cgccctccca cttccccacc
     2101 gagtcgccgt aatacgacgg ctcgatgcct tcgcggtgcg ggcgcccgtc ggtcggaatg
     2161 attcgcgcag cgcgttgcag ctcggggatg atcacgatgg tcttcgggtt ctggacgatc
     2221 tgaatcggca ggatgtagag catcccggac ggaaagccgg ccggcaggca catcgcgcgc
     2281 ggctcgtcgt ggcgcgggtc gccgttgcgc gcctcataca acaatccttc cgcgccgggc
     2341 ttcacgggcg ccatcttgtc cgcgttgaag atcaggttgc cgcgcggtcc cgtcgcgttc
     2401 acggtcgagg gcggcgagta gattcccgag aaatccggct tgccgtccgc catgcgagga
     2461 acgtcctgcg cgctcgactg ggtagtcatg cctatggcga tcgcggcggc ggccagcaca
     2521 ctcgacacca acctcgagct cttcatcgtg cgccctcctg tgtcgccgtg aacacgtttc
     2581 tgccgtccgg aaacgtgacg ctgcgtcccg atgcgttgtt ggagccgtca cgtgcacgcg
     2641 agccttcgac gttgacgacg gcgccgagct tcaatgcgtc tttcgtgatc ccacgacgca
     2701 tgagcgcgcc cggaggcgca cccgaaaatc cccacgtcgt gatgttgccc ttgtcatccg
     2761 gcacgtcgac atagaaccag acgtgcgggt tcagccactc gaccttcacg atggtgccgg
     2821 tcaccttgac cggagcgtcc gggtcgaact cggcggtttc cgagtggtgc ccgagggccg
     2881 gcgtcgtcag cgcgatgagc gcaaaaacgg ccggaaggtt tcgcgtcatc ccccacctcc
     2941 gcaacgattg ccaaggcgta tatccccaca acgcgggtac gaacgcaacg ccatcaacgc
     3001 ccccagcccg gccatcacgt tgcgagaccc ttggccgcaa acattgcgag ccgctgctcg
     3061 cgcagcggat cgtccgccac ggcgctcgtc gtgtcgaaca ccatcgtcgc gcggcgcttg
     3121 gcatcgaacg cgggccagga tggcagaccg cgcgtgttcg ggtcgccgct gcgcgcgaac
     3181 gcgagccaag catcactgac gtggtcggct aacggcgcgg cgccgggcac gccgcgcgtc
     3241 cacggcgaag cgtcgaggtt gtggaacacg aacgggattt ccaccgtgtg cggcgctttg
     3301 tagcgcccac cttcgagcgg cgtttcccaa cggaagtaat agagatacac ggggccgcgg
     3361 ccgagggccg ccctgcgctc ggcgattttc atcaccggcg cgccgtagcg ctcgtcgctc
     3421 gcaatcaaga agtagagatc cgacggcgac gcgcctggat tggctcggga atagacgtcg
     3481 aggatacgac tcgcggaatc gcccaacagt tcgccgacgc gtgcacgcat gctggcatcg
     3541 tcgagcgaga actcgctcgc atttgcgctc gaggtgagct ccgtgcgcgt ggacccgatg
     3601 atcagcggca catcggccga gatggcagcg gcctgcgggt ggaacgggtg ctgcgccacg
     3661 gccgtgccgt cgaccgtcgg cgagaagccc atcgtcatct gatccacgtt catgcggcgc
     3721 acggtcgcga agtaggcgct catgagcgtc gcgagcggca ccgtctgcag ctcgcgccac
     3781 tggcccggtg tgagcttgag ctcctgcaaa agctcgcgcg cgacgcgcgc agcttgctcg
     3841 ggctctacga gctcgatcgt cgcaccgctc tcgatgatcg cgcggtggaa gagccccttg
     3901 gccgacggca tcgcgagcaa cgtcgccacc tttcggccgc cgcccgactg gccgaagatc
     3961 gtgacgttgt ctgggtcgcc accgaactcc gcgatattcg cgcggaccca ctcgagcgcg
     4021 tgcacgatgt cgagcatgcc gacgtcgccg gactgcgcga agtcgctgcc gccgagttcc
     4081 gcgagatggg tgaagccgag gacgttcaac cggtgattga tggagacgat cacgacgtcg
     4141 ccgcggcgag cgaggttagt accgtcggtt acgggtgacg aaccggaacc cgtgacgaac
     4201 ccaccgccgt ggcaccagaa gagcaccggc cgctgacgcg cgtcgccgac cgcaggcgtc
     4261 cagacgttga gcactaggca gtcctcgccc tcgggcggca ggtttgccgc cgcgacgccg
     4321 agcccggatt ccgtgcgcgc tacaccgggc tctcgctggg gcgcgctcgg cccatacacg
     4381 agcgcgtccc ggacacccgt ccacgcggca gggttggttg gcgggcggaa acgagccgca
     4441 ccgcccgtgc tcgctccgta gggaatacct ttgaaggtct tgatgcctcc ggcatcgaca
     4501 ccgcggacgc ggccgaacgt cgtcgccgct tcgatgtagc gcggctcctg tgccacgccg
     4561 gaacgccata aggttccggc cgacagcgcc gtaagcatgg cactctgctt taggaatgct
     4621 ctgcgtgaac gttcgaacga catggctccc cccactcggt cgatgttggt ggggagttta
     4681 ctccggcggc cccgtaagat gctgcgcatg cagaaattcg agtttgcagt tctgggtgcc
     4741 ggggcgatgg ggtccatcct gggcgcccat ctcgctcgcg ccgggcactc cgtggcgatg
     4801 ctcgcgaggg gccggcgggc cgagcaaatt cgcagcgagg gcctgagaat ttcggggctg
     4861 atccagctct ccgcgcccg
//
LOCUS       DATCUD010000715         2227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_78095, whole genome shotgun sequence.
ACCESSION   DATCUD010000715 DATCUD010000000
VERSION     DATCUD010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2227
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78095"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..233)
                     /gene="rpsP"
                     /locus_tag="VIQ99_10410"
     CDS             complement(<1..233)
                     /gene="rpsP"
                     /locus_tag="VIQ99_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004287066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEY9183604.1"
                     /translation="MVIIRLARGGTNKRPFYHVVVADRRSPRGGRYIERVGFFNPIAA
                     GGEERLRVDLGRVDHWLSHGAQPSERVEHLLKQ"
     gene            complement(356..1720)
                     /gene="ffh"
                     /locus_tag="VIQ99_10415"
     CDS             complement(356..1720)
                     /gene="ffh"
                     /locus_tag="VIQ99_10415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011395687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEY9183605.1"
                     /translation="MFDQLTARLTEALQRVTGRGRITEDNVRDTVRTIRMALLEADVA
                     LPVAKALVERVRDRAMGEEVARSLNPGQAFVKIVHDELVAVLGGDAAALNPQGHPAVI
                     MLVGLQGAGKTTTAAKLARHLTTTRGGAALLASTDVYRPAAREQLKKLAGDLGVGFSS
                     STSDSPAVIAREALETARRGGQRWLILDTAGRLHVDADMMKEARELHELVAPSETLFV
                     VDSMAGQDAVNSARAFHEALPLTGVILTKADGDARGGVALSVREVTGLPIKLVGTGEK
                     VDALEPFVPTRFASRILGMGDVVGLVEQVQGAVKREDMERLAEKVKEGRQLSLEDYRE
                     QLRQLLKMGGIEQLLDKVPGLKPEQLAAAKFDPKVFRRQIGIIDSMTPAERRRPDLID
                     GSRKRRIAAGSGLPVQDVSRLLKQHKQMAKTMKQLAKGGGMQRLLGSLRPGGGGPPLL
                     RGRR"
     gene            1881..>2227
                     /locus_tag="VIQ99_10420"
     CDS             1881..>2227
                     /locus_tag="VIQ99_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009150062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HEY9183606.1"
                     /translation="MSETAPIGWLVAVIIALLAVGAFFSGTETALMSLNRYRLRHLAR
                     SGNRAARVAEYLLQRPDRLIGVILLGNNAVNIAAAALTTILAQRLGTEGAVLVATFVL
                     TAVVLIFGDLAPKT"
BASE COUNT          351 a          779 c          720 g          377 t
ORIGIN      
        1 tactgcttga gcaagtgctc gactcgctcc gacggctgag ccccgtgcga caaccagtga
       61 tcgacacgac cgagatcgac gcgcaagcgc tcttcgccgc ccgcggcaat cgggttgaag
      121 aacccgacgc gttcaatgta gcgcccgccg cgggggctgc gccgatccgc cacgacgacg
      181 tggtagaagg gccgcttgtt ggtaccgccg cgtgccagcc gaatgatgac catagccgag
      241 aaaccttccg ttcgcagaaa aaccgaggcg gtccaatgga ccgccccttt tgaggcgcgc
      301 aattctactg ggtttgccgc cggagcgtaa gccccactgc gcggcctagc gcggcctagc
      361 gccgcccgcg cagcaggggc ggcccaccgc cgccggggcg cagggagccg agcagacgct
      421 gcatgccccc gcccttggcc agctgcttca tcgtcttggc catctgcttg tgctgcttga
      481 gcaggcggct gacgtcctga accggcagac ccgagccggc cgcaatacgg cgcttgcgcg
      541 agccgtcgat caggtcgggg cgacggcgct cggccggggt catcgagtcg atgatgccga
      601 tctggcgacg gaagaccttc gggtcgaact tggccgcggc gagctgctcc ggcttcaagc
      661 ccgggacctt gtccagcagc tgctcgatcc cgcccatctt caggagttgg cgcagttgct
      721 cgcggtaatc ctcgagactg agctggcggc cttccttgac cttctcggcc agccgctcca
      781 tgtcctcacg cttgacggcc ccctgcactt gctccacgag gccgaccacg tcgcccatgc
      841 cgaggatccg cgacgcgaag cgcgtcggca cgaagggctc gagcgcgtcg accttctctc
      901 cggtgcccac gagcttgatc ggcagaccgg tgacctcacg gaccgacagc gcgacaccgc
      961 cgcgtgcgtc gccgtccgcc ttggtcagga tcacaccggt cagcggcaac gcctcgtgaa
     1021 acgcacgcgc cgagttcacg gcgtcttggc ccgccatcga atcgacgacg aacagcgtct
     1081 cgctgggcgc tacgagctcg tgaagctcgc gcgcttcttt catcatgtcg gcgtcgacgt
     1141 gcagccggcc agccgtgtcc aggatcagcc agcgttgccc cccgcgccgg gccgtctcga
     1201 gcgcctcgcg cgcgatgacc gccggcgaat cgctcgtcga ggacgagaag ccgacgccga
     1261 ggtcgccggc gagctttttc aactgctcgc gggccgcggg tcgatagacg tcggtgctcg
     1321 cgagcagcgc cgcgccgccg cgcgtggtgg tcaagtgacg cgccagcttc gcggccgtcg
     1381 tggtcttgcc ggcaccttgt aggccgacca acatgatcac ggccggatgg ccctgaggat
     1441 tcagcgcggc cgcgtcgccg ccgagcacgg cgacgagctc gtcgtgaacg atcttcacga
     1501 aagcctggcc cggattgagg ctgcgcgcga cctcctcgcc cattgcgcga tcgcgcactc
     1561 tctcgacgag agccttcgcg accggcagcg ccacgtcggc ttcgagcaat gccatgcgaa
     1621 tcgttcgcac ggtatcgcgg acgttgtctt cggtgatccg gccgcggccg gtcacgcgct
     1681 gaagggcttc cgtgagtcgc gcggtcagtt ggtcgaacat gatttcggac ggtctcgggg
     1741 ctcgatgatg gaacgaatcg aagcctatca cgcgccgaag cggcgccgat ccgagcgtac
     1801 ctgggcttcc ttgacacccc caccacggtt accacaatgt ttgtaggaag accgccgcct
     1861 cccggagggg cccccaagct ttgagcgaaa ccgcaccgat cggttggttg gtggccgtca
     1921 tcatcgcttt gctggcggtg ggtgcgttct tctcgggcac cgaaaccgcg ttgatgagcc
     1981 tgaaccgcta ccggctccgg cacctcgcgc gctccggcaa tcgtgcggcc cgcgtcgccg
     2041 agtatctgct gcaacggccg gaccgattga tcggcgtaat cctgctcggc aataacgccg
     2101 tcaacatcgc cgccgcggcg ctcacgacga tcctggctca gcggctcggt accgaaggcg
     2161 cggtgctcgt cgcgacgttc gtgctcacgg ccgtcgtcct gattttcgga gacctggcgc
     2221 caaagac
//
LOCUS       DATCUD010000716         1740 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105995, whole genome shotgun sequence.
ACCESSION   DATCUD010000716 DATCUD010000000
VERSION     DATCUD010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1740
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105995"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..235)
                     /locus_tag="VIQ99_10425"
     CDS             complement(44..235)
                     /locus_tag="VIQ99_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006745897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HEY9183607.1"
                     /translation="MEWADLFAGLAFYLILEGLFPFLAPEQWRRSLSALAGLGESRLR
                     LFGLAAVIAGLLLLFSVRG"
     gene            complement(279..1160)
                     /gene="hflC"
                     /locus_tag="VIQ99_10430"
     CDS             complement(279..1160)
                     /gene="hflC"
                     /locus_tag="VIQ99_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013442465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY9183608.1"
                     /translation="MSPRTNLVLILAVLAAIMIRMSVFTVDTREHAVKFRIGRIVESN
                     HTAGLHFKLPFFENVARYPKRVLIFDEESRERFLTGEKKNLIVDYFVNWRVVDPAQYY
                     RAVGADQGTAEQRLSAIVKEGIRAAIGRRTLQEVVSAERTELMQEMLLDVQDRSPELG
                     IEVLDVRVKRIDLAEDVSESVFSRMRQERTSVATQLRAEGEEEYVQVRADADRQRTVI
                     LAEAYRDAERIRGAGDARAAEIYAAAYGKDREFYAFYRSMQAYRESIGRDQDVLVLQP
                     DSEFFQFLQSQIGSTRN"
     gene            complement(1174..>1740)
                     /gene="hflK"
                     /locus_tag="VIQ99_10435"
     CDS             complement(1174..>1740)
                     /gene="hflK"
                     /locus_tag="VIQ99_10435"
                     /inference="COORDINATES: protein motif:HMM:TIGR01933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEY9183609.1"
                     /translation="EGRAEVSQQTQSLLQTTLDSYGAGFTIYEVNLVGAEFPGEVEIA
                     VQDSIRAREDRERRILEAVTYSNEILPRARGEAERRRQDAEAYREQVVANAEGEADRF
                     NQILAEYQRAPGVTRERMYIETLEAILRNSTKVLVDTEGSNNLLYLPLDQLVQRRSSA
                     PALEAAPPAVTTPPAARGAPSARERDTR"
BASE COUNT          302 a          612 c          504 g          322 t
ORIGIN      
        1 gtcgccccac tgcgttccga tcactactac gtttcgaccc acgctagcct cgcacgctga
       61 acagcagcaa cagccccgcg atcaccgctg ccaaaccgaa caatcgcaac cgactttcgc
      121 cgagccccgc caatgcggag agacttcgcc gccactgctc cggggccaga aacgggaata
      181 gcccttccag gatcaagtag aaagccaagc ccgcgaaaag atctgcccac tccaaggcct
      241 caagcctccg ccatcatcgt cgtggagttt gcgccgggtc agttacgcgt ggaaccgatc
      301 tggctctgca ggaactggaa gaactcgctg tcgggctgca acacgagcac gtcttggtcc
      361 cggccgatcg actcgcgata agcctgcatg ctgcgataga acgcgtagaa ctcgcggtcc
      421 ttgccgtatg ccgccgcgta gatctcggcc gcgcgcgcat cgccggcgcc gcggattcgc
      481 tccgcatcgc ggtacgcctc ggccagaatc accgtgcgtt gccgatcggc atccgcacga
      541 acctgcacgt actcttcctc gccctctgcg cgcagctggg tcgcaacgct cgtgcgttcc
      601 tgacgcatgc ggctgaagac cgattcgctg acgtcctcgg cgaggtcgat gcgcttcacg
      661 cgcacgtcga gcacctcgat gccgagctcc ggcgagcgat cctgcacgtc cagcaacatc
      721 tcttgcatca gctccgtgcg ctccgccgac acgacttcct gcagtgtccg ccggccaatc
      781 gccgctcgga tcccctcctt gacgatggcc gacaaccgtt gctccgccgt cccctggtcg
      841 gcgccgaccg cccggtaata ctgagccgga tccacgactc gccagttcac gaagtaatcg
      901 acgatgaggt tctttttctc gcccgtcagg aaacgctcgc gcgactcttc gtcgaagatc
      961 aggacccttt tcgggtagcg cgccacgttc tcgaagaacg gtagcttgaa atgcaggccg
     1021 gccgtgtggt tcgactcgac gatgcggccg atccggaact tcactgcgtg ctcgcgcgtg
     1081 tcgaccgtga acacggacat ccgaatcatg atggcggcca gcaccgcgag gatcagcaca
     1141 aggttcgtac gtgggctcat ctcgaatcct ccctcagcgc gtgtcccgct cgcgcgcgct
     1201 gggagcaccc ctcgcggccg gaggcgtggt gactgccggt ggcgccgcct ccaaggcggg
     1261 ggcgctcgaa cggcgttgca cgagctgatc gagcggcaaa tacagcaaat tgttgctgcc
     1321 ctcggtatcg acgagcacct tcgtcgagtt tctcaggatc gcctcgagcg tttcgatgta
     1381 catgcgttcg cgagtcacgc cgggcgcccg ttggtactcg gcgaggatct ggttgaaacg
     1441 atcggcctcg ccctcggcat tcgcgacgac ttgctcgcga tacgcctcgg catcctgccg
     1501 acgccgctcg gcctcgccgc gcgccctcgg caagatctcg ttcgaatagg tcacggcctc
     1561 gaggatcctc cgctcgcggt cctcgcgggc tcggatcgaa tcctgcactg caatttcgac
     1621 ttcgcccgga aactcggcgc cgacgaggtt cacttcgtag atcgtgaacc cggctccgta
     1681 cgaatcgagc gtggtctgca gcaggctctg cgtctgctgc gacacctcgg cgcgaccctc
//
LOCUS       DATCUD010000717         2039 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_105999, whole genome shotgun sequence.
ACCESSION   DATCUD010000717 DATCUD010000000
VERSION     DATCUD010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105999"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            153..923
                     /locus_tag="VIQ99_10440"
     CDS             153..923
                     /locus_tag="VIQ99_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009850904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEY9183610.1"
                     /translation="MSTDPTSFRNELAAAVFCDFENLALGVEQDKKGRFEIELVLKRL
                     LERGRIVFKRAYCDWTRFKGFMDEFHRHGFEMVDIPSSKVSGKNSADIRMVVDAIDLC
                     YSKSHIDTFVLLTGDSDFSPLVSKLKENDKRVLGCGVRSSTSDLLANNCDEFIFYDDL
                     IRVSERRRPKARKAEDSKQQEALDRLVATVTSLETDYPTVWGSAVKQTVKRVYPGFDE
                     SYYGYRSFSDLLEHAAKEGLITIERDEKTGNYRVRAVH"
     gene            1013..1339
                     /locus_tag="VIQ99_10445"
     CDS             1013..1339
                     /locus_tag="VIQ99_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183611.1"
                     /translation="MSQQGKTAVRDGVQVVQGTPTAPISRPTLFLRLWRVTEGKEQRT
                     RATLFMVRPGAGDYVIKELIPDMDLDAQAALDKAVAIAKRGDASVVYLNADLNKIPKP
                     RNILTA"
     gene            complement(1329..1982)
                     /locus_tag="VIQ99_10450"
     CDS             complement(1329..1982)
                     /locus_tag="VIQ99_10450"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY9183612.1"
                     /translation="MPKLPTHASRVRNALYTAWLALAAGMLCAGTLPSAAQEITNGTL
                     LVASPDLTDPSFAKAVVLVLRHDTDGTLGVVLNRPTNLEPAKVFPELVGSVGSYTGKL
                     FRGGPIAPTQLLFLVRGLAAATVTGPEVLDKVFLSVGEDSLADMVRLAEGTDELRAYA
                     GHAAWVPGQLRAEIEAGGWQIVDGTADLVFDPEPGKLWMELEGRGGRAGDVVAAVRP"
BASE COUNT          365 a          674 c          673 g          327 t
ORIGIN      
        1 gcgaagctca agaaggtgta cgaagcgctg tccgaagcgc tggccgccgg cacgccgttc
       61 gcgccgtcgg cttgatctac gccctgcgct gggcttgtca cgccgcgcgg gaccactcac
      121 tatcctaagg acttcaacac ccgggtgcct cgatgtcgac cgatcctacc tcattccgta
      181 acgagctcgc ggcggcagtg ttctgcgact tcgagaactt ggctttgggc gtcgagcaag
      241 acaagaaggg gcgcttcgag atcgagctcg tgctgaagcg gctgctcgag cgtggccgga
      301 tcgtgttcaa gcgtgcctac tgcgactgga cgcgcttcaa gggcttcatg gacgagtttc
      361 atcggcacgg cttcgagatg gtcgacatcc cgagctcgaa ggtgtcgggc aagaacagcg
      421 ccgacatccg catggtcgtc gacgcgatcg atctctgcta ctcgaagtcg cacatcgaca
      481 cgttcgtgct cctcacgggc gacagcgatt tctcgccgct cgtgtcgaag ctcaaggaga
      541 acgacaagcg cgtgctcggg tgcggcgtgc gcagctcgac gtcggacctc ttggcgaaca
      601 actgcgacga gttcatcttc tacgacgacc tgatccgcgt ctcggagcgg cgccggccga
      661 aggcgagaaa ggccgaggac agcaagcagc aagaggcgct cgaccgcctg gtcgcgaccg
      721 tgacctcgct cgaaaccgat tacccgaccg tgtggggctc ggccgtcaag cagaccgtca
      781 agcgcgtgta tccggggttc gacgagagct attacggcta tcggagcttc tcggatctgc
      841 tcgagcacgc cgccaaggaa gggctgatca cgatcgagcg cgacgagaaa accggcaatt
      901 accgcgtccg cgccgtgcac tgacacgcgc tttcgttacc tagttcacag cgggcgcggc
      961 cggcacgccg gagactgggc gttcacaagg acggtcgacc ggggcgacgg ccatgtcgca
     1021 acagggcaag acagcggtca gggatggcgt gcaggtcgtg cagggcacgc cgacggcgcc
     1081 gatttcgcgt cccacgctgt ttctgcgtct gtggcgcgtg accgagggca aggagcaacg
     1141 aacccgcgcg acgctgttca tggttcgccc gggcgccggc gactacgtga tcaaagagct
     1201 gatcccggac atggacctcg acgcccaagc ggcgctcgac aaggccgtcg cgatcgcaaa
     1261 gcgtggcgac gcgtcggtcg tctatctgaa cgcagatctg aacaagattc cgaagccgcg
     1321 caacatcctc acggcctgac cgcagccacg acgtccccgg cgcggccccc gcgcccttcg
     1381 agctccatcc acagcttgcc cggctcggga tcgaacacga gatccgcggt gccgtccacg
     1441 atctgccacc cgcccgcctc gatctcggcc ctgagttggc ccggcaccca cgccgcatgg
     1501 ccggcgtagg cgcgcagctc gtcggtgccc tccgcgagtc ggaccatgtc ggccagggag
     1561 tcttcgccga cgctcaagaa caccttgtcg agcacctcgg gccccgtcac ggtggcggcc
     1621 gcgaggccgc ggacgagaaa cagcagctgg gtcggggcaa tcggcccgcc gcgaaacagc
     1681 ttgcccgtat acgatccgac gctgcccacg agctccggga acaccttcgc gggctcgagg
     1741 ttcgtcggcc ggttcagcac gacgccgagc gtgccgtcgg tatcgtgccg cagcacgagc
     1801 acgaccgcct tcgcgaagct cgggtccgta aggtcgggcg aggcgacgag cagcgtaccg
     1861 ttcgtgatct cctgcgccgc ggacggtagc gttccggcgc agagcatccc ggccgcgagc
     1921 gcgagccagg cggtgtatag cgcgttgcgc acgcgcgagg cgtgagtggg aagcttcggc
     1981 atcgggccat cataaccgtg tttgacacgg gtacggtgtg ccgtatgatg cgcgccctc
//
LOCUS       DATCUD010000718         2459 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_28117, whole genome shotgun sequence.
ACCESSION   DATCUD010000718 DATCUD010000000
VERSION     DATCUD010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28117"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..363
                     /locus_tag="VIQ99_10455"
     CDS             <1..363
                     /locus_tag="VIQ99_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011350342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY9183613.1"
                     /translation="GVAGVVLISGRLRADARPDNPNAAAVRAYFGDDESLYEARSPVT
                     HAAKLDVPLFIAIAEYENPLLDVYGAEMLHRVAEARNRAPRFLRLADHNHISIVAHFN
                     TEEELLGREILEFFAEGR"
     gene            complement(370..1938)
                     /locus_tag="VIQ99_10460"
     CDS             complement(370..1938)
                     /locus_tag="VIQ99_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014616036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY9183614.1"
                     /translation="MIKNLRTLLAALAAGLSLGVAQGQELRIAMGADVTSMDPHFVNL
                     FPNNNIAEHVFEKLITLDPDSRLIPGLAESWKAVTPTTWEFKLRKGVRFHDGSDFTAE
                     DVAFSIERVGRIPDSPGPFTTYTKAIKEVQIVDPHTIRFVTAVPHPQLQNDINTIYIV
                     SKKTASGATTADFNSGKAMIGTGPFKFVSFKRGDRVELARNDAYWGQKPAWAKATFRI
                     IPSDPTRVAALLSGDVDAIENVPTADFAKLKANPNFATSTKTSHRIIFYHVDQLRDAS
                     PFVFDKSGKPLAKNPLKDVRVRQAISKAIDRNAIKDRLMEGLAIPSANLVPAPMFGHN
                     PALKPETFDPEGAKKLLAAAGYPNGFAMTIHGPNNRYVNDDQIMQAVATMLSRVGIQT
                     RVETMPMSVYLARARKLEFSFAMLGWGASTGEASSPLRAHLVTYIPEKGWGEFAWGRY
                     GNQKVNDLLDRALSTIDDRQREKLIQEAVGIAMSELGIIPLHHQINTWATRKGVTYTP
                     RTDEYTLAFLFRPQ"
BASE COUNT          400 a          774 c          845 g          440 t
ORIGIN      
        1 ggcgtggcgg gcgtcgtgct gatcagcggc cggctgcggg ccgacgcccg gccggacaac
       61 cccaatgcgg cggccgtgcg ggcctacttc ggcgacgacg aatcactcta cgaagcgcgc
      121 tcaccggtca cgcacgccgc gaaactcgac gtgccgctgt tcattgcgat tgccgagtac
      181 gagaacccgc tcctcgacgt gtacggcgcc gagatgctcc atcgcgtcgc cgaggcccgg
      241 aaccgagcgc cccgcttcct gcgcctggcg gaccacaacc acatctccat cgtggcccac
      301 ttcaacaccg aggaggagct cctcggtcgc gagatcctcg agtttttcgc cgaaggcagg
      361 tagcagccgc tactgcggcc ggaacaggaa tgccagcgtg tactcgtcgg tgcgcggcgt
      421 gtaggtcacg cccttccggg tggcccaggt gttgatctgg tgatggagcg ggatgattcc
      481 cagctcgctc atcgcgattc cgaccgcctc ctggatcaac ttttcgcgct gcctgtcgtc
      541 gatcgtcgac agcgccctgt cgagcaggtc gttcaccttc tggttgccgt agcggcccca
      601 cgcgaactcg ccccagccct tctcggggat gtaggtcacg agatgcgcac gcagcggcga
      661 ggacgcctcg ccggttgatg ctccccagcc gagcatcgca aagctgaact cgagtttgcg
      721 cgcgcgggcg aggtaaacac tcatcggcat cgtctctacc ctggtctgga tgccgactcg
      781 gctgagcatc gtcgccaccg cctgcatgat ctggtcgtcg ttcacgtagc ggttgttcgg
      841 gccgtggatc gtcatcgcga agccgttcgg gtagccggcc gcggcgagca gcttcttggc
      901 cccttcgggg tcgaaggtct cgggcttgag cgcggggttg tggccgaaca tcggcgccgg
      961 aacgaggttc gccgagggga tcgcgagccc ctccatcagg cggtccttga tcgcgttacg
     1021 gtcgattgcc ttcgagatcg cctgccgcac gcgtacgtcc ttgagcgggt tcttcgcgag
     1081 cggcttgccc gacttgtcga agacgaacgg cgaggcgtcg cgcagctggt cgacgtgata
     1141 gaagatgatc cggtgcgagg tcttggtgga ggtcgcgaag ttcgggttgg ccttgagttt
     1201 cgcgaagtcg gccgtgggga cgttctcgat cgcatcgacg tcgcccgaca ggagcgccgc
     1261 gacgcgggtc gggtcgctcg ggatgatgcg gaacgtcgcc tttgcccacg cgggcttctg
     1321 cccccagtag gcatcgttgc gcgccagctc gacccggtcg ccgcgcttga acgaaacgaa
     1381 cttgaacggc ccggtgccga tcatcgcctt gcccgagttg aaatcggcgg tggtcgcgcc
     1441 ggaggccgtc ttcttcgaca cgatgtagat cgtgttgatg tcgttctgca gctgcgggtg
     1501 cggaacggcc gtgacgaagc gaatcgtgtg cgggtccacg atctggacct ccttgatcgc
     1561 cttcgtgtac gtcgtgaacg gccccggcga gtcggggatc ctgcccacgc gttcgatcga
     1621 gaacgccacg tcctcggcgg tgaagtccga gccgtcgtgg aacctcacgc ccttgcgcag
     1681 cttgaactcc caggtggtgg gcgtcaccgc tttccacgac tcggcgagac cggggatgag
     1741 ccgcgagtcc ggatcgagcg taatgagctt ctcgaacacg tgctcggcga tgttgttgtt
     1801 cggaaacaga ttgacgaaat gcggatccat cgacgtcacg tcggcgccca tcgcgatgcg
     1861 cagttcctgg ccctgcgcga cgccgagcga aaggcccgcg gcgagtgcgg cgagcagtgt
     1921 gcggagattc ttgatcatat tgggttcccc gggtggagct gcgaagcggc gattataggg
     1981 ggaccgcgac atgccgaaga cggaccaccc ccgcacagcg ctccgcggga gcggggccgt
     2041 cgtggaacga gcgctggtca gtgcttgcga cgacggcagg ccagcgtcaa gcccggccag
     2101 cgctgcagag ccgacaagca ggtccctggt tccggtacgt attgccgcgg atcgccgaac
     2161 gagacgttat cgacagagcg gctcgtcaaa agcgccgaca gtccgtttcg agtgatgtcg
     2221 gatgcagtcg aggacacacc gaaagacccg catcccgccg agaaatgacc gacggagcgc
     2281 gttgttttcg acggcgccgg cgcgcgcgat gaaggcgccc ggcgctacgc gcagatgtgg
     2341 ttcgacgtcc cgtggggctg aacggtccgc gcgatgcgga aggccgagag cggagagccg
     2401 acgggctcgc cgtcgagcat ctggtcgagg caggcgatca gctcggcgtg atagggggc
//
LOCUS       DATCUD010000719         2291 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56730, whole genome shotgun sequence.
ACCESSION   DATCUD010000719 DATCUD010000000
VERSION     DATCUD010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56730"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..747)
                     /locus_tag="VIQ99_10465"
     CDS             complement(<1..747)
                     /locus_tag="VIQ99_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY9183615.1"
                     /translation="MSDEIVELEDFALELAHTAGGIAQAHFRQPITVENKGITAFDPV
                     TNADRAIERVLRAAIVERYPDHGIVAEEEGERSGDGEYTWFIDPIDGTRAFMTGSPLW
                     GTLIGLARRGQPLFGLLAQPVLEEVFFGGPSGSWLIKAERRDRLKSRGTASLEQAVLA
                     STHPDMFTGEKAAAFRRLAGRCLLHRFGGDCYNYAMLAAGYLDLVVESQLKPYDIVPL
                     IPVLEGAGCVVTDWRGRPALAGGDVVAAGSR"
     gene            complement(767..2146)
                     /locus_tag="VIQ99_10470"
     CDS             complement(767..2146)
                     /locus_tag="VIQ99_10470"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9183616.1"
                     /translation="MQASGAAAGTINLTELMDNCRIGPLQIRVFALCLASLIMDGFDV
                     QVMAFVATTMFAEWNVPPPTLGGLLAWGHAGVLAGAIIFSTMADKIGRRPVLVGATLF
                     YAVMTVATAFAQDVEQMRWLRFVAGLGLGSIIPNATALVGEYSPKRTRVAWIMCITVG
                     FTAGAAISGFVANALIDAFGWRAVFIFGGLVPFVIAILMFVWLPESLQFLAVRRRNLD
                     RLANWLKQLDPTLRLGPNTQFTASETSRQGIPFWHLFREGRALVTFLFWIVNFTNILA
                     LYSLAGWLPLIFQNLMGYDRGTANLLGTFVQVGGTVGAFGLAWLITRAGFTPMLALTF
                     AVATVSVALIGQPGFSLPVLYVIVTIAGWCIVGGQPGLNALASSYYPTYLRSTGVGAG
                     LGVGRLGALAGPLIGGALIAAQWSPQQLLWAAAVAPAISTAVIVALWIVLGRTPKPAD
                     ASQAPALAH"
BASE COUNT          424 a          769 c          765 g          333 t
ORIGIN      
        1 gcgcgacccc gcggcgacga cgtcaccgcc ggccagggcc ggccgaccgc gccaatccgt
       61 gacgacgcag cccgccccct cgaggaccgg gatcaacggg acgatgtcgt agggtttcaa
      121 ttggctctcg acgacgaggt cgaggtagcc ggccgcgagc atcgcgtagt tgtagcaatc
      181 gccgccgaag cggtgcagca ggcagcgtcc cgcgagcctg cgaaaggccg cggccttttc
      241 gcccgtgaac atgtcgggat gcgtgctcgc gagcacggcc tgctcgagcg acgcggtgcc
      301 ccggctcttc aagcgatcgc gccgctctgc tttgatgagc cagctgccgc tcggcccacc
      361 gaagaacacc tcctcgagca ccggctgcgc gagcaggccg aacaacggct gtccgcggcg
      421 agcgaggccg atcagcgtgc cccagagcgg cgagcccgtc atgaacgctc gcgtgccgtc
      481 gatgggatcg atgaaccacg tgtactcgcc gtcgccgctc cgctcaccct cctcttccgc
      541 gacgatgccg tggtcgggat accgttcgac gatcgccgcg cgcagcacac gctcgatcgc
      601 gcgatccgcg ttcgtgacgg gatcgaacgc cgtgatgcct ttgttctcga ccgtgatcgg
      661 ctggcgaaaa tgcgcctgcg caatgccgcc ggccgtgtgg gccagctcca gggcaaagtc
      721 ttcgagctcg acgatctcgt cggacatgcg gaggtggaag ccgccgttag tgcgcgagtg
      781 ccggcgcttg cgaggcgtcc gccggtttcg gcgtccggcc tagcacgatc cacaacgcca
      841 cgatgacggc cgtcgagatc gcgggtgcca cggccgccgc ccagagcagc tgttgcggcg
      901 accactgtgc cgcgatgagg gcgccgccga tcaaggggcc cgcgagcgcc ccgaggcggc
      961 cgacgccgag accggcaccc acacccgtgg agcggaggta ggtcggatag tagctcgacg
     1021 ccagcgcatt gagccccggt tggccgccga cgatgcacca ccccgcgatg gtcacgatca
     1081 cgtacagcac cggcagcgag aagccgggct ggccgatcag agcgacgctc acggtggcga
     1141 cggcgaacgt cagcgcaagc atcggagtga agcccgcgcg cgtgatcagc catgcgagcc
     1201 cgaaggcgcc gaccgttccg ccgacttgca cgaacgtgcc gagcaaattt gcggtgccgc
     1261 ggtcgtagcc catcaggttc tggaagatca gaggcaacca gcccgctagc gagtagagcg
     1321 caaggatgtt cgtgaagttg acgatccaga acaagaacgt cacgagcgct cggccctcgc
     1381 gaaacaggtg ccagaacggg atgccctggc gactcgtctc gctcgccgtg aattgagtat
     1441 tcgggccaag acgcagggtg ggatcgagct gcttcagcca attcgcgagt cgatcgaggt
     1501 tccgcctccg aacggcgaga aactgtaagg actccggcaa ccacacgaac atcaggatcg
     1561 ctatcacgaa cggcacaagg ccgccgaaga tgaacacggc gcgccaaccg aacgcgtcga
     1621 tcagcgcgtt cgcgacgaag ccgctgatcg cagcgccggc cgtgaagccc accgtgatgc
     1681 acatgatcca ggcgacgcgc gttcgtttcg ggctgtactc accgacgagc gccgtcgcgt
     1741 tcggaatgat ggacccgagg ccgagacccg caacgaaccg tagccagcgc atctgctcga
     1801 cgtcctgcgc gaacgccgtc gctaccgtca tgaccgcgta gaacagtgtc gccccgacga
     1861 ggacggggcg gcgtccgatc ttgtcggcca tcgtgctgaa gatgatggcg ccggcgagga
     1921 ccccggcgtg cccccatgcg agcagcccgc cgagcgtcgg agggggcacg ttccactcgg
     1981 cgaacatcgt cgtcgcgacg aaggccatca cttggacgtc gaagccgtcc atgatcagcg
     2041 aggcgaggca gagggcgaac acgcggatct ggagcgggcc gatccggcag ttgtccatga
     2101 gctcggtgag gttgatcgtt ccggccgcgg cgccagaggc ttgcatcgtt attctccccc
     2161 ttcttgattc cgagggtcgc gcgcggcgcg caatggaccg cccagagtcc gtccactata
     2221 cacggggagt cccggcgcac ccacccgacg aaattacgcg gggaagaagt cgatcggctt
     2281 cgtcgtcgta a
//
LOCUS       DATCUD010000720         1994 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42383, whole genome shotgun sequence.
ACCESSION   DATCUD010000720 DATCUD010000000
VERSION     DATCUD010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1994)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1994
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42383"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..412)
                     /locus_tag="VIQ99_10475"
     CDS             complement(<1..412)
                     /locus_tag="VIQ99_10475"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY9183617.1"
                     /translation="MKSAARVAAIAWLIAAVYYFYQYVLRSAPAVMMPELSDAFGIGA
                     LGVASLAGLFYYGYSPFSLVAGVAMDRLGPRRVVPLGAAVVGIGALLFATGSTEAASA
                     GRFLQGAGGVFALIGAAYIATQNFPASRAATLIGA"
     gene            complement(417..>1994)
                     /locus_tag="VIQ99_10480"
     CDS             complement(417..>1994)
                     /locus_tag="VIQ99_10480"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011686681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009063 - amino acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEY9183618.1"
                     /translation="DHTPSVTDIRLPEVPENADRRTFLMRSAVIGATAVITGRSISAQ
                     ERTTAATAAPPVVPLSPDLDVVKKAAKPIMTTIDEFYKVGPGPSSSHTIGPMRITYDF
                     YQRCTKLPADQLARATALKVHLYGSLSATGKGHGTERAALAGIVGNEPATVDPAFLDG
                     LAANPNQTFPVKLGARTFNASLADIVYDATKGEWPHPNTMTCKLMAGNAVLHELEYYS
                     VGGGFIEWKGYQPPQKGAPKYPYATMQELKGHAERNNLSIAQVIMANEVAVSGKTEAE
                     VNAFIDKVTTAMVNIVKTGLAAPTATLPGPIKLKTKAGDVYKRAMDDQYERQRGVGVV
                     AAYALAGSEENARGHLVVTAPTGGSAGVIPALVYAIGEGGRNLSQEKIRSGMLAAAGI
                     GYLCKHNATLSGAEGGCQAEIGVASAMGAAFLAQAHDFPPQVVANAAESSLEHHLGMT
                     CDPVAGFVQIPCIERCAFGAVKAWTGFMIASNEIPANRRVDFDTTVSAMALTAREMNT
                     KYKETSEGGLAVSLVLC"
BASE COUNT          302 a          692 c          667 g          333 t
ORIGIN      
        1 tggcgccgat cagcgtcgcg gcgcgcgacg ccggaaaatt ctgggtcgcg atgtacgcgg
       61 ccccgatcag cgcgaacacg ccgcccgcgc cttgcaggaa cctgcccgcg ctcgcagcct
      121 ccgtgctgcc ggtcgcgaac aagagcgcgc cgatgccgac cacggcggcg ccgagcggca
      181 cgacccggcg cgggccgagc cggtccattg cgacaccggc cacgaggctg aacggggagt
      241 agccgtaata gaagagcccc gccagcgacg cgacgccgag cgcgccgatg ccgaacgcat
      301 cggacagctc cggcatcatc acggccggcg ccgagcgcag cacgtactga tagaagtagt
      361 agaccgccgc gatcagccaa gcgatcgcgg cgacccttgc ggcgcttttc atgcgctcag
      421 cagagcacca acgagacggc gagaccgcct tcggacgtct ccttgtactt cgtgttcatc
      481 tcgcgagccg tcagcgccat cgcgctgacg gtcgtgtcga agtcgacgcg gcggttcgcc
      541 gggatctcgt tgctcgcgat catgaagccc gtccaggcct tcacggcgcc gaacgcacag
      601 cgctcgatgc acggaatctg cacgaagccc gcgaccgggt cgcacgtcat gccgaggtgg
      661 tgctcgagcg acgactcggc cgcgttcgcg acgacctgcg gcgggaaatc gtgagcctgc
      721 gcgaggaacg ccgcgcccat cgcggatgcc acgccgatct cggcctgaca accgccctcg
      781 gcgcccgaca gcgtcgcgtt gtgcttgcag aggtagccga tgccggccgc cgccagcatg
      841 ccgctgcgga tcttctcctg cgacaggttg cggccgccct cgccgatcgc gtacacgagc
      901 gccggtatta cgccggccga gccgccggtc ggggccgtca cgacgagatg cccgcgcgcg
      961 ttctcctcgg agcccgcgag cgcatacgcc gcgacgacgc cgacgccgcg ctgacgttcg
     1021 tattgatcgt ccatcgcgcg cttgtagacg tcgccggcct tggtcttgag cttgatcggc
     1081 cccggcaacg tggcggtcgg cgccgcaagg cccgtcttca cgatgttgac catcgcggtc
     1141 gtgaccttgt cgatgaacgc gttgacctcg gcctcggtct tgccggacac cgcgacttcg
     1201 ttcgccatga tcacctgcgc gatcgacagg ttgttgcgct cggcgtgacc cttgagctcc
     1261 tgcatcgtcg cgtacgggta cttcggcgcg cccttctgcg gcggctgata gcccttccac
     1321 tcgatgaagc cgccgccgac cgagtagtac tcgagctcgt gcagcacggc attcccggcc
     1381 atcagcttgc aggtcatcgt gttcggatgc ggccactcgc ccttggtcgc gtcgtagacg
     1441 atgtcggcca gcgacgcgtt gaacgtcctc gccccgagct tcacggggaa cgtctgattc
     1501 ggattcgctg cgagaccgtc gaggaacgcg ggatcgaccg tcgcgggctc gttgccgacg
     1561 atgccggcca gcgccgcgcg ctccgtgccg tggcctttgc ccgtggcgct caggctgccg
     1621 tagaggtgca ccttgagcgc ggtcgcacgc gcgagctgat ccgcgggcag cttcgtgcag
     1681 cgttggtaga aatcgtacgt gatccgcatc gggccgatcg tgtgcgagct cgatgggccc
     1741 gggccgactt tgtagaactc gtcgatcgtc gtcatgatcg gcttcgccgc cttcttcacg
     1801 acgtcgaggt ccggcgacaa cggaacgacc ggcggcgcag cggtcgccgc ggtggttcgt
     1861 tcctgcgcgg agatcgagcg gcccgttatc acggccgtcg cgccgatcac ggcgctgcgc
     1921 atcaggaagg ttctgcggtc ggcattctcg ggaacctccg gcagacgaat atcggtcacg
     1981 gacggggtgt ggtc
//
LOCUS       DATCUD010000721         2374 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42387, whole genome shotgun sequence.
ACCESSION   DATCUD010000721 DATCUD010000000
VERSION     DATCUD010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2374
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42387"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..504)
                     /locus_tag="VIQ99_10485"
     CDS             complement(<1..504)
                     /locus_tag="VIQ99_10485"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: protein motif:HMM:NF013939.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEY9183619.1"
                     /translation="MTLEELRKRLSEVDHDLITLVAARQKIVAEVGAHKIRNAVPTRD
                     YEREREVLKGAHDRAKALGLDPGLAEEIMNALIRASLTHQEQERVAAETSGAGKRVLI
                     IGGAGQMGAWFAHFLDSQGFAIEVADPSPVAVPFPRVADWRAQRLDHDLIIVATPMKI
                     AGEVLTEL"
     gene            593..1438
                     /gene="fghA"
                     /locus_tag="VIQ99_10490"
     CDS             593..1438
                     /gene="fghA"
                     /locus_tag="VIQ99_10490"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016353434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046292 - formaldehyde metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEY9183620.1"
                     /translation="MTTPSVERVSESRCFEGRHLVYKHVSSACACTMRFAIFLPPAAE
                     HTRVPALYWLSGLTCTEENFSVKAGAQRYAAELGLALIIPDTSPRGVNIPGEDAQMDV
                     GTGAGFYVNATQAPWAAHYRMYDYVRDELPAVVNANFPIDPVRKSISGHSMGGHGALI
                     VGVSNPDRYRSVSAFAPIAAASESGWGQHALTAYLGTDRRSWLPYDASAVIRARPSHH
                     ELLVDQGMADPYLDQLRPNDLKEACRKSGQRLTYRERLGYDHGYYFVSTFIAEHLQFH
                     ADALR"
     gene            1449..2096
                     /gene="pdxH"
                     /locus_tag="VIQ99_10495"
     CDS             1449..2096
                     /gene="pdxH"
                     /locus_tag="VIQ99_10495"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF004231.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEY9183621.1"
                     /translation="MPSLPTTLPDDPLPTAKRWLAEAEALGRRNPNAIALASVDRTGR
                     PSVRMVLLKDLVAAGYLVFYTNYGSRKAAEIEATGRAAAVLYWHELGRQVRFEGLVVR
                     SPEAESDAYFATRPRQSQISAWTSEQSRPLANLGELERRASRVAAEKGGGAASQQPLP
                     RPEFWGGYRLWLDAVELWVEGAHRFHERARYERRLEPKDAHSFTADRWRWQRLQP"
     gene            2115..2303
                     /locus_tag="VIQ99_10500"
     CDS             2115..2303
                     /locus_tag="VIQ99_10500"
                     /inference="COORDINATES: protein motif:HMM:NF025614.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPXCG motif-containing cysteine-rich protein"
                     /protein_id="HEY9183622.1"
                     /translation="MIQAETITCPYCWQPIEIVLDLSVESQRQVDDCSVCCRPIVITY
                     RAEDGELAALDVEAESSA"
BASE COUNT          415 a          783 c          750 g          426 t
ORIGIN      
        1 gagctcggtc agcacctcgc ccgcgatctt catcggcgtc gcgacgatga tcaggtcgtg
       61 atcgagccgc tgcgctcgcc aatcggccac gcgcgggaac ggcacggcca ccggagacgg
      121 atccgcgacc tcgatcgcga atccttgaga gtcgagaaag tgcgcgaacc acgctcccat
      181 ctggccggca ccaccgatga tcaacacgcg tttgccggcc ccgctggtct ccgcggccac
      241 gcgctcctgc tcttggtgcg tcaacgacgc gcggatcagg gcgttcatga tctcttccgc
      301 gagcccgggg tcgagcccga gcgctttcgc gcgatcatgc gcgcctttca acacctcacg
      361 ctcacgctca taatcgcgcg tcggcacggc attgcggatc ttgtgcgccc cgacctcggc
      421 gacgatcttc tgccgcgcgg caacgagggt aatgaggtcg tgatcgactt cggatagacg
      481 tttacgtaat tcttcgagtg tcatgcatac ctcgtgtggg cggttttgta accctcaccg
      541 gcccaaggtg caaggtacgc tgtcgctgcg gatcatattc aaggaagtag gaatgaccac
      601 gccctccgtc gaacgagtca gcgagtccag gtgcttcgag ggccgccatc tcgtctataa
      661 gcatgtgtcg tcggcctgcg catgcacgat gcggttcgcg atcttcttgc cccccgcggc
      721 ggagcacacg cgtgtgccgg cgttgtactg gctctccggc ctcacctgca cggaagagaa
      781 cttcagcgtc aaggcaggag cacagcgcta tgcggcggag ctcggcctcg cgttgatcat
      841 tccggacacg agccctcgcg gcgtcaacat cccgggcgaa gacgctcaaa tggacgtcgg
      901 aaccggcgcc ggattctacg tcaatgcgac ccaggcaccg tgggccgcgc actaccgcat
      961 gtacgactac gttcgtgacg agctgccggc cgtggtcaac gcgaatttcc cgatcgatcc
     1021 ggtgcgcaag tcgatcagcg ggcactcgat gggtggccat ggcgcgctga tcgtcggcgt
     1081 cagcaacccg gaccgatacc gctccgtgtc ggcgttcgcg ccgatcgcgg cggccagcga
     1141 gtccggttgg ggtcagcatg cgctcacggc ctatctaggg accgaccgtc ggagctggtt
     1201 gccctacgat gcgtcggccg tgattcgcgc ccgcccgagc caccacgagc tgctcgtcga
     1261 tcagggcatg gcggatccgt atctcgacca gctccggccg aacgatctca aggaagcctg
     1321 ccgcaaatcg ggtcagcgtc tgacctatcg cgagcgtttg ggctacgacc atggctacta
     1381 tttcgtgagc acgttcatcg cggagcacct gcaattccac gcggacgcgt tgcgctgacg
     1441 taagagccat gccgtcgttg ccgaccactc ttccggacga tccgctgccg acagccaagc
     1501 gctggctcgc cgaagccgag gcgctcgggc ggcgtaatcc gaacgcgatc gcgctcgcga
     1561 gcgtggaccg cacaggccga ccatcggtac gcatggtatt gctcaaggac ctcgtggcgg
     1621 ccggttatct cgtgttctat accaactacg gctcgcgcaa agccgcggag atcgaggcaa
     1681 cgggacgcgc tgccgccgtg ctctattggc acgagctcgg acggcaggtt cgtttcgaag
     1741 gcctcgtagt ccggtcaccg gaagccgaga gcgatgccta cttcgcgacg cgcccacggc
     1801 agagccagat cagcgcctgg accagcgaac agagtcgtcc gctcgccaat ctcggcgaac
     1861 tcgaacggcg cgcgtccaga gtcgcggccg agaagggcgg aggcgccgcg tcgcagcaac
     1921 cactgccgcg ccccgagttt tggggcggct acaggctgtg gctcgacgcc gtcgagctgt
     1981 gggtcgaagg cgctcaccgc ttccacgaac gggctcgcta cgaacgacgc ctggagccga
     2041 aggatgcaca ttcgttcacc gccgaccgtt ggcgttggca acgactacag ccctagtccg
     2101 acacgagcgc ttgcgtgatt caggcggaaa cgattacctg tccttactgc tggcaaccga
     2161 tcgaaatcgt gctcgatctg tctgtggagt cccagcgtca ggtcgacgat tgttccgtgt
     2221 gctgtcgccc gatcgtcatc acttaccgcg ccgaggacgg cgagctcgcg gcgctcgacg
     2281 tcgaagcaga gagctcggcg tgattcggct cggtgtactg gcgctgctgg ctctgccgct
     2341 cgcggccgtc ggcgagcaaa ggatcgtaga catc
//
LOCUS       DATCUD010000722         2304 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21141, whole genome shotgun sequence.
ACCESSION   DATCUD010000722 DATCUD010000000
VERSION     DATCUD010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21141"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..666
                     /locus_tag="VIQ99_10505"
     CDS             <1..666
                     /locus_tag="VIQ99_10505"
                     /inference="COORDINATES: protein motif:HMM:NF015922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase C-terminal beta-propeller
                     domain-containing protein"
                     /protein_id="HEY9183623.1"
                     /translation="EIDVMGLSYKAGDQFLSAARGKSNQLAVFIDSTGRAYSVGAHTL
                     PSARGQGEPLAGFFNPPDGASFRAVLIGAPEDKWVVASSAGYGFVVKLQELYANKKAG
                     KTALRVPEGGTVVPASPVGAAGSRLAAASSDGRLLVFPLEELPELSKGKGNKILAVPS
                     KDGVVLAGICVLAPEQGLRIDSGTRHMVIKPADLEHYAGGRGRRGMALPRGWRTVDRL
                     SAE"
     gene            complement(653..>2304)
                     /locus_tag="VIQ99_10510"
     CDS             complement(653..>2304)
                     /locus_tag="VIQ99_10510"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY9183624.1"
                     /translation="QYKKQLKAFLAGSVDAIAHVQEGILVDANRAWADLFGYSDPAGF
                     VGAPLMDFFEGGSQAALKGALVACGRGQWTGESIKVVARTRDGQKLPIELQLESTSVD
                     REPAVKLSVPRPPSEAREPEELVEQAVHKDATTGFYHRRRFLEVLTDRLDASTRGGVR
                     VLAYIRPDKFREIEEQIGPLASEDVLVQIAEQLRELAQPNDVYGRFGGQIFTMYLERG
                     ALRDVQAWAQNALTRIAQRIFASAHNTLSVTCTIGLAEVGPTTSQLDALIAEARRSNQ
                     QGRDQGGNRVVLQQTSDESTRVQRFDEIWVQQIKSALMENRFKLAHLPIASLSGEQRV
                     MYDTVLRMIDAQGDEVSGSEFMPAAARNRLLRAIDRWVIGASLTFCAKTPLDCAFIKL
                     SAESLIDRTLIDWLKKAVESSGVTPHHLCFQVTEENATQYLTQTQALANELRKQGHRF
                     AIESFGSGRDSGRILAQTSMDFLKIDGSLMQGIATDQALQERVRVYVNAATGRGVPTI
                     AERVEDANTMAVLFQLGVAFVQGHYVHEPEVVLAEAVATRR"
BASE COUNT          363 a          774 c          767 g          400 t
ORIGIN      
        1 gagatcgacg tcatgggcct atcgtacaag gccggcgatc agttcctatc tgcggcgcgc
       61 ggcaagagca accagcttgc cgtgttcatc gacagcaccg gccgcgccta cagcgtcggc
      121 gcgcacacgc tgccgtcggc acgtgggcag ggcgagccgc tcgccggttt tttcaacccg
      181 cccgacggcg cgagcttccg cgccgtgttg atcggtgcgc ccgaggacaa gtgggtggtg
      241 gcgtcgtcgg caggctatgg gttcgtcgtg aagctgcagg agctctacgc gaacaagaaa
      301 gccggcaaga cagcgctgcg cgtgcccgaa ggcggaaccg tcgtgcccgc ctcaccggtc
      361 ggcgccgcag gctcgcggct cgcggccgca tcgagcgacg gccgactgct cgtgttcccg
      421 ctcgaggagc tgccggagct cagcaagggc aagggcaaca agattctggc ggtgccgagc
      481 aaggatggcg tcgtgctcgc cggaatctgc gtgctggcgc cggagcaggg cctgcgcatc
      541 gactcgggca ctcgacacat ggtaatcaaa ccggccgacc tcgagcacta tgcgggcgga
      601 cgcggtcggc gcggcatggc gctgccgcgc ggctggcgga ccgtggatcg gctcagcgcc
      661 gagtagcgac cgcttccgcg agcacgacct cgggctcgtg gacgtaatga ccctgcacga
      721 aggccacgcc gagctggaac agcaccgcca tcgtgtttgc gtcctcgacg cgctcggcga
      781 tcgtcgggac gccgcggccg gtcgcggcgt tgacgtaaac ccgcaccctt tcctgcaagg
      841 cttgatcggt cgcgatacct tgcatcaacg acccatcgat cttgagaaag tccatcgacg
      901 tttgcgcgag gatgcgtccc gagtcgcggc cgctcccgaa gctctcgatc gcgaaccggt
      961 gtccttgctt tcgcagctcg ttcgcgagcg cctgcgtctg cgtcaggtac tgcgtcgcgt
     1021 tctcttcggt gacctggaag cagaggtgat gcggcgttac gcccgagctc tcgacggcct
     1081 tcttgagcca gtcgatcaat gttcggtcga tcagcgactc ggcggacagc ttgatgaacg
     1141 cgcagtcgag cggtgtcttg gcgcagaacg tgaggctcgc gccgatcacc cagcggtcga
     1201 tcgcgcgcag cagccgattc cgcgcggcgg cgggcatgaa ctcgctgccc gagacttcgt
     1261 caccttgcgc gtcgatcatc cgcagcacag tgtcgtacat gaccctctgc tcgccgctca
     1321 gcgaagcgat cggcaggtga gcgagcttga aacgattctc catcagcgcc gatttgatct
     1381 gctgtaccca gatctcgtcg aagcgctgca cgcgcgtact ctcgtccgac gtctgctgta
     1441 ggacgacgcg attaccgccc tggtcccggc cctgttgatt cgagcgccgc gcctcggcga
     1501 tcagtgcgtc cagctgtgac gtcgtgggcc cgacctccgc gaggccgatc gtgcaggtga
     1561 ccgacagcgt gttgtgcgcg ctcgcgaaga tgcgctgcgc gatgcgcgtc agcgcgttct
     1621 gcgcccacgc ctggacgtcg cgcagcgcgc cgcgctccaa gtacatcgtg aagatctggc
     1681 ccccgaaccg accatagacg tcgttaggct gggcgagctc gcggagctgc tccgcgatct
     1741 gcaccaacac gtcctcgctc gcgaggggtc cgatctgctc ctcgatctcg cggaacttgt
     1801 ccggtcggat gtaagcgagc acgcgcacgc cgccgcgcgt cgacgcatcg agtcgatcgg
     1861 tcaaaacctc gaggaaccgg cggcggtgat agaagcccgt cgtcgcgtcc ttgtggacgg
     1921 cctgctcgac gagctcctcg ggctcgcgtg cttcgctcgg cgggcgcggc acgctcagct
     1981 tcacggcagg ctctcggtcg accgacgtgc tttcgagctg tagctcgatc ggcagcttct
     2041 ggccgtcgcg cgtacgggcc acgaccttga tcgattcgcc ggtccattga ccgcggccac
     2101 acgcgacgag cgcgcctttg agcgcggcct ggctgccgcc ctcgaagaag tccatcagcg
     2161 gcgcgccgac gaagccggcg gggtccgagt agccgaacag gtcggcccag gcccgattcg
     2221 cgtccacgag gatgccctcc tgaacgtgcg cgatcgcgtc gacggagccg gccaagaacg
     2281 ctttgagctg cttcttgtac tggt
//
LOCUS       DATCUD010000723         1552 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_56769, whole genome shotgun sequence.
ACCESSION   DATCUD010000723 DATCUD010000000
VERSION     DATCUD010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56769"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..612
                     /locus_tag="VIQ99_10515"
     CDS             133..612
                     /locus_tag="VIQ99_10515"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013717616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEY9183625.1"
                     /translation="MFHVILFKPEIPPNTGNLIRLCANAGATLHVVHPLGFDLSDAQV
                     RRAGLDYHEMACVREHANLDACLAEIATERVFALTTRATRSVYDAEFRAGDAFLFGPE
                     TSGLPQALLDTIAPEMRLRIPMRAGNRSLNLSNAAAVTVYEAWRQLGFAGSTTRARS"
     gene            complement(593..>1552)
                     /locus_tag="VIQ99_10520"
     CDS             complement(593..>1552)
                     /locus_tag="VIQ99_10520"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008114906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEY9183626.1"
                     /translation="WGTALAVQLARTGHPAALWARDAGQVAAMARERRNTRYLADVEF
                     PDLLEVTADLGWAVADADDVLVVVPSHALRATLTALAALPLRRLAWATKGFELDTGLL
                     PFQVAGQLLPASLPTAVLSGPTFAREVGAGLPTAMTIASGDQDYAQRLAERISSETFR
                     AYTSSDVVGVEVGGATKNVYAIGAGICDGLGFGANTRIALIARGLAEMTRLGLALGGR
                     KETFMGLAGMGDLVLSCTDDQSRNRRFGLLLARGASPQEALAAIGQVVEGYNGARAVH
                     RVAERHKVPMPIVDQLNKVLHEGADPRAAVAALMRRPISSELG"
BASE COUNT          246 a          524 c          528 g          254 t
ORIGIN      
        1 cgcagaaggc gactttcagg cggctcatcg agatggcaac gctgagtgcg acatcggtcc
       61 aattatcgta cgagcgtcgg gcgcaacgcc actgcgagcc cgccgtgccg ccagggtcta
      121 tcattcgcgc cgatgtttca cgtgattctg ttcaagccgg agattccgcc gaacacgggc
      181 aatctgattc ggctatgcgc gaatgcggga gctacgctgc acgtcgtgca tccgctcggc
      241 ttcgacttga gcgatgcgca ggtccgccgc gcggggctcg actatcacga gatggcctgt
      301 gttcgcgagc acgcgaatct cgacgcatgt ctcgccgaga tcgcgacgga acgcgtgttt
      361 gcgctgacga cgcgcgcgac gagatcggtc tatgacgccg agtttcgggc cggcgatgcg
      421 tttctgttcg ggccggagac gagcgggttg ccgcaggcgc tgctcgacac gatcgcgccg
      481 gaaatgcggc tgcggatccc gatgcgggcg ggtaatcgca gcttgaatct ctcgaacgcc
      541 gcggccgtga cggtctacga agcttggcgg cagctcggct tcgcgggcag cactacccga
      601 gctcggagct gatgggccgc cgcatcagcg ccgcaacggc ggcgcgcgga tcggcgcctt
      661 cgtggagcac cttgttgagt tggtcgacga tcggcatcgg caccttatgg cgttcggcga
      721 ctcgatgcac ggcgcgtgcg ccgttgtagc cctcgacaac ttgcccgatc gcggcgagcg
      781 cctcctgcgg gctcgcgccg cgggccaaaa ggagcccgaa acgccggttc cgcgattgat
      841 cgtccgtgca gctcagcacg aggtcgccca tcccggcgag gcccatgaac gtctccttgc
      901 ggccgcccaa ggccaagccc aaccgcgtca tctccgcgag cccgcgtgca atcaatgcga
      961 tgcgcgtgtt cgcgccgaag ccgagcccgt cgcagattcc cgctccgatc gcgtaaacgt
     1021 tcttcgtcgc gccgccgacc tcgacgccga cgacgtcgct cgaggtgtag gcgcggaacg
     1081 tctcgctgct gatccgttcc gcgaggcgtt gcgcgtaatc ctgatcgcca gacgcgatcg
     1141 tcatcgcggt cggtagcccg gcgccgacct cacgggcgaa cgtcggtccc gacagcacgg
     1201 cggtcggtaa gctcgccggc agcagctgtc cggcgacctg aaagggcagg aggcccgtgt
     1261 cgagctcgaa gcctttcgtc gcccacgcca ggcggcgcag tggcaacgca gccagtgccg
     1321 ttagcgtggc ccgcaacgcg tggctcggca cgacgacgag cacgtcgtcg gcgtccgcta
     1381 cggcccatcc taagtcggcc gtgacctcga gcaggtctgg gaactcgacg tcggcgagat
     1441 agcgagtatt gcggcgctcg cgcgccatcg ctgcgacctg gcccgcgtcg cgagcccaga
     1501 gagccgcggg gtgaccggtg cgcgcgagct gcacggcgag cgccgtgccc ca
//
LOCUS       DATCUD010000724         2316 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35325, whole genome shotgun sequence.
ACCESSION   DATCUD010000724 DATCUD010000000
VERSION     DATCUD010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2316
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35325"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..395
                     /locus_tag="VIQ99_10525"
     CDS             159..395
                     /locus_tag="VIQ99_10525"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004521 - RNA endonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEY9183627.1"
                     /translation="MLAATTAGATSRRCAQPLHVTIPQRDGLEQPCQVMTEQPRTLDR
                     QRLIRGPLTRLTPEEMRRVERSFKAVVGLYEPAS"
     gene            complement(470..>2316)
                     /locus_tag="VIQ99_10530"
     CDS             complement(470..>2316)
                     /locus_tag="VIQ99_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012869.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY9183628.1"
                     /translation="PTLPRANTAHRTPRRLPPYYLRRMVKKTKLASADLRPVERAMLS
                     RIVAFLAPYRTQAALVLVAIAVSSVLSLTPALLVKRVVDDAIPQGDLALLFLLCVGMI
                     IGPLLAGLVQVGQKYIATWIGERVMLDLRVGLFRHLHRQSIGWFTTLPPGEAVTHVLN
                     DVKGAGDAVSSTLTGVAQNAIALASTLTLLVALDWRLTLVAIGALPLFVVPSRRVGHR
                     RKELKREAQARIGELTGILTETLSVSGALLLKVFGGERREAERFEAKAAEAMALQLRQ
                     SLVGRWFELMIGLFESVGPALVFAVGGWLVITQGVGLGTVVAFVTVLKRLYGPAADLA
                     GVHVDLITSYAYFDRIFRILDLTPTIVDAPDAQPLTHVRGEVEFHHVSFAYAGGGEVL
                     HDFDLRVGPGQVVALVGASGAGKSTAAGLVPRLHDPTEGSVTLDGIDLRRIRLDDLRA
                     QIGVVTQDVFLFHGSVVDNLRYGRPDATLDEVVDAARRAQVHDLIASLPEGYATIVGE
                     RGHRFSGGERQRLAIARVLLKRAPVLILDEATSSLDLVSENLLRKALEPLLGERTTLV
                     IAHRLATVRRADLIVVLDRGRIVERGTHAELLALHGHYFRLHGETLIS"
BASE COUNT          427 a          794 c          773 g          322 t
ORIGIN      
        1 gccgtcgggt actcgatcca ctgcgccgcg agcactccgg gcaccgcaag gaggcacgcg
       61 gccagcgcgc gacgcgccga ctgcgagcag cgtcccacta cccacgacct ccaagacatc
      121 tccgacatcg agcgcactcc ccctccgcaa ccgagccaat tctagccgcg acgaccgccg
      181 gcgccactag ccgtcgatgc gcgcagccgc tgcacgtgac aatcccacaa cgtgacggtc
      241 tcgagcagcc gtgtcaggtc atgacggagc agccgcgaac gctggatcga cagcggctca
      301 tcaggggacc gctgactcgg ctcacgccgg aagagatgcg ccgggtcgag cgcagcttca
      361 aggccgtcgt cggtctgtac gagccggcga gctagaacgg ccagatttgt tcgtcatcga
      421 caccgcgctg tggccttccc gcgcgggggc gcgcagcgca tagagcggct caactgatca
      481 acgtctcgcc gtgcaaccga aaatagtgac cgtgtagcgc cagcagctcg gcgtgcgtgc
      541 cacgctccac gatccggccg cgatccagca cgacgatcag atcggcccgg cgcacggtcg
      601 cgaggcggtg cgcaatcacg agcgtggtgc gctcgccgag cagcggctcg agcgctttgc
      661 gcagcagatt ctcgctgacc aggtcgaggg agctcgtggc ctcgtctaga atcaggaccg
      721 gcgcgcgttt cagcagcacg cgcgcgatgg ccagtcgctg tcgttcgccg ccggagaagc
      781 gatggccgcg ctcgcctacg atcgtcgcgt agccctcggg cagcgaggcg atcagatcgt
      841 gcacttgcgc gcgccgcgcg gcgtcgacga cctcatcgag cgtcgcatcc ggccggccat
      901 aacggaggtt gtcgaccacg gaaccgtgga acaggaacac gtcctgcgtc acgacaccga
      961 tctgcgctcg caaatcgtcg agccggatgc ggcgcagatc gatgccgtcg agcgtaacgg
     1021 agccctccgt cggatcatgg agccgcggca cgagcccggc ggccgtgctc ttgccggcgc
     1081 cggaagcacc gacgagcgcc acgacttggc cgggtccgac cctgagatcg aaatcgtgca
     1141 gcacctcgcc gccgccggcg taggcgaacg acacgtgatg gaactcgacc tcgccacgca
     1201 cgtgcgtgag cggttgcgca tcgggcgcat cgacgatcgt gggtgtgaga tcgagaatgc
     1261 ggaagatgcg atcgaaatac gcatacgagg tgatcaagtc gacgtgcacg cccgcgagat
     1321 cggcggccgg gccatagagg cgcttcagca ccgtcacgaa ggcgacgacg gtgcctaggc
     1381 cgacgccttg ggtgatgacg agccatcccc caaccgcaaa caccagtgcc gggccgacgc
     1441 tctcgaacag cccgatcatg agctcgaacc agcggcccac gagcgactga cgcagctgta
     1501 gcgccatcgc ctcggcggcc ttcgcctcga accgctcggc ctcgcggcgc tcgccgccga
     1561 acactttcag caacaaggcg cccgataccg acagcgtctc ggtgaggatg ccggtgagct
     1621 caccgatcct cgcctgtgcc tcgcgcttca gctccttgcg ccggtgaccg acgcggcggc
     1681 tcggcacgac gaacaggggc agcgcgccga tcgcgaccaa cgtcaagcgc caatcgagcg
     1741 cgacgagcag cgtcagcgtg gacgcgagcg cgatcgcgtt ctgcgccaca cccgtgagtg
     1801 tcgaggagac ggcgtcaccg gcacctttga cgtcgttcag gacgtgcgtc acggcttcgc
     1861 ctggcggcag cgtcgtgaac cagccgatcg attgccggtg caggtgccgg aacaagccga
     1921 ctcgcaggtc gagcatgacg cgctcgccga tccacgtggc gatgtacttc tgcccgactt
     1981 gtacgagccc ggcgagcaac ggtccgatga tcatgccgac gcacagcaag aacagcagcg
     2041 cgagatcgcc ctgcgggatg gcatcgtcga cgacgcgctt cacgagcagc gcgggcgtga
     2101 ggctcagcac ggagctcacg gcgatcgcga cgaggaccaa ggcggcctgg gtccggtacg
     2161 gcgcgagaaa cgccacgatt cgcgacagca tcgcccgctc cacgggccgc aggtccgcgg
     2221 aggcgagctt ggtcttcttc accatgcggc gtagatagta cggcggcaag cgccgcggag
     2281 tcctatgcgc cgtattggcg cgggggagag tgggtg
//
LOCUS       DATCUD010000725         2691 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_92269, whole genome shotgun sequence.
ACCESSION   DATCUD010000725 DATCUD010000000
VERSION     DATCUD010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2691)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2691)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2691
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92269"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="VIQ99_10535"
     CDS             complement(<1..377)
                     /locus_tag="VIQ99_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009850542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia channel protein"
                     /protein_id="HEY9183629.1"
                     /translation="MAQEIDSGSTAWMLTSTALVLLMTLPGLALFYGGLVRTRNVLSV
                     LMQCFALCCVVSLIWVVFGYSLAFGEGNGWIGGLSKLWMRGVEVDTVSGAIPETVFAM
                     FQLTFAIITPALIIGGFAERTRFS"
     gene            complement(460..798)
                     /locus_tag="VIQ99_10540"
     CDS             complement(460..798)
                     /locus_tag="VIQ99_10540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016654695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY9183630.1"
                     /translation="MKLITAVVKPFRLDDVRNALAEVGVQGMTVTEVKGFGRQRGHTE
                     LYRGAEYVVDFLPKVKVEVAVTDELVERVIEAIIGAAKTGKVGDGKIFVTELMQVYRI
                     RTGETGDQAI"
     gene            957..1913
                     /gene="msrP"
                     /locus_tag="VIQ99_10545"
     CDS             957..1913
                     /gene="msrP"
                     /locus_tag="VIQ99_10545"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011048955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEY9183631.1"
                     /translation="MFKRWDKDIKPSEITPEASFLNRRQLLQGAVAAGLLPSIMSSSQ
                     AATIPANGMFEGVTKWSGSTTEKANSYEDITTYNNYYEFGTGKSDPAANAHTLKPSPW
                     SVQVTGAAAKTGTYTLEDILKPHALEERIYRLRCVEAWSMVVPWVGFPLGDLLKRFEP
                     TSQAKYVQFFTLNDRSQMPGLRYPVLDWPYREGLTIAEAMHPLALAVVGVYGKVLPNQ
                     NGAPLRTVIPWKYGFKSAKSIVRIHFTDTQPQTSWNMAIPQEYGFYSNVNPEVDHPRW
                     SQASERRLGNGLFAPRIPTQMFNGYADQVADLYRGLDLVKNY"
     gene            1932..2639
                     /locus_tag="VIQ99_10550"
     CDS             1932..2639
                     /locus_tag="VIQ99_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007041214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HEY9183632.1"
                     /translation="MTPRWVVITKVGIWAACLAPLVLLILAATGVYGSLGANDVETIL
                     NVCGKTGLNLLMLTLCITPIRRSTGINRLVSFRRLSGLFAFFYLALHFLTYALLDLGL
                     LYPLIYGPTGAAVTPWQQLLADIAERPFVTVGFAALVLLIPLAVTSTHGFQRQLGRRW
                     TKLHRLVYVVAVLGVVHYWWQVKSDTDVAEPLLYSLLLAVLLGVRLHHRLVHAKAAVP
                     PPNARVEPPQPGEKAGE"
BASE COUNT          515 a          865 c          813 g          498 t
ORIGIN      
        1 gagaagcgcg tgcgttcggc gaacccgccg atgatcagag ccggcgtgat gatcgcgaac
       61 gtcagctgga acatcgcgaa cacggtctca gggatggcac cactgacggt gtcgacctcg
      121 acgccgcgca tccacagctt cgaaaggccg ccgatccagc cgttgccctc gccgaacgcg
      181 agcgaatagc cgaacacgac ccagatcagg gaaaccacgc agcagagcgc gaaacattgc
      241 atcaggaccg aaagcacgtt ccgcgtgcgc acgaggccgc cgtagaacag cgcgaggccc
      301 ggcaacgtca tcagtagcac caatgcggtc gacgtcagca tccaggccgt ggagccgcta
      361 tcgatttcct gcgccatcgc aaacccgggg cacaacccgg ccgcgagcgc gacgaaagca
      421 ctcaagttct ttttcatttt gactcccccc ggagttgctt cagatcgctt gatcgccggt
      481 ttcaccggtg cgaattcgat acacctgcat gagctcggtc acgaagatct tgccgtcgcc
      541 gaccttgccc gtcttcgccg caccgatgat cgcctcgatc acgcgctcga cgagctcgtc
      601 ggtcacggcg acctccacct tcaccttggg taggaagtcg acgacgtact ccgcccccct
      661 gtagagctcg gtatggccgc gctgccgacc gaaccctttg acctcggtga cggtcatacc
      721 ctgtacgccg acctcggcca acgcattgcg gacgtcatcg aggcgaaaag gtttcacgac
      781 tgccgtaatc agcttcatta gcgcccccca aaagaagtat taaaaggcca gatgcctatg
      841 gagatttgcc ctgtgacgag cttgttttgt ggttttttgg tgcgggggta ttctagccaa
      901 gtcgtggcat gcattgcgac gctggcgggc cgaattccag cttaaaggtg agcactatgt
      961 tcaagcgatg ggacaaagac atcaagccat cggagatcac tccggaagcc agcttcttga
     1021 atcgacgcca gctgttgcag ggcgccgtcg ccgcaggcct tttgccgtcg atcatgtcct
     1081 cgagccaggc cgccacgatt cccgcgaacg gcatgttcga aggggtcacg aaatggtcgg
     1141 gatcgacgac cgagaaggcc aacagctacg aagacatcac gacgtacaac aactactacg
     1201 agttcggcac gggcaagagc gacccggccg ccaacgcgca cacgttgaaa ccttcgccgt
     1261 ggtcggtgca ggtcacgggc gccgccgcga agacgggcac ctatacgctc gaggacatcc
     1321 tgaagccgca cgcgctcgag gaacgcatct atcgccttcg gtgcgtcgag gcctggtcga
     1381 tggtcgtgcc gtgggtcggg tttccgctcg gtgatttgtt gaagcgcttc gagccgacgt
     1441 cgcaagcgaa gtacgtgcaa ttcttcacgc tgaacgatcg ctcgcagatg ccggggctcc
     1501 gttatccggt gctcgattgg ccgtatcgcg aagggctcac gatcgccgag gcgatgcacc
     1561 cactggcgct cgcggtcgtc ggcgtgtacg gcaaagtgct gccgaatcaa aacggcgcgc
     1621 cgctacgcac ggtcattccg tggaagtacg ggttcaagag cgcgaagtcg atcgttcgca
     1681 ttcacttcac cgatacgcag ccgcagacca gctggaacat ggcgatcccg caggaatatg
     1741 gcttctattc gaatgtgaac cccgaggtcg atcatccgcg ctggagccaa gcgtccgaac
     1801 ggcggctcgg caacggtttg ttcgcgccgc gcattccgac gcagatgttc aacggctatg
     1861 cggaccaagt cgcggacctc taccgggggc tcgacctcgt caagaactac tgacgcgccc
     1921 accgcccccg catgactccg cgctgggtgg tcatcacgaa agtgggcatc tgggcggcgt
     1981 gcctggcgcc gctcgtgctg ctgattctcg cggccaccgg cgtatacggc tcgctcggtg
     2041 caaacgatgt cgagacgatt ctgaacgtgt gcggcaagac cgggctgaac ctgttgatgc
     2101 tgacgctgtg catcacgccg atccgccgct cgacaggaat caatcggctc gtatcgttcc
     2161 ggcggttgtc ggggctgttc gcattcttct atctggcgct gcacttcctg acctacgctc
     2221 tgctcgacct cggcctcctg tacccgctga tctacggacc gacgggcgcg gcggtcacgc
     2281 cctggcaaca gctcctcgcc gatatcgcgg aacgcccgtt cgtcacggtc gggttcgcgg
     2341 ccctcgtgtt gctgatcccg ctggcggtca cttccacgca tggctttcag cgccagctcg
     2401 ggcgccgatg gaccaagctg catcggctcg tctacgtcgt agccgtgctc ggagtcgtgc
     2461 actactggtg gcaggtcaag tccgacacgg acgtcgccga gccgctgctg tattcgttgc
     2521 ttcttgcagt gctactcggc gtgcggctgc accatcggct agtacacgcg aaagccgccg
     2581 tgccgccgcc gaatgcgcgc gtcgagccac cacagcccgg cgagaaagcc ggcgagtaac
     2641 gcgacgatcg ccgcggggat cacccaagtc agcggcagcg tgtggcggta g
//
LOCUS       DATCUD010000726         2939 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49538, whole genome shotgun sequence.
ACCESSION   DATCUD010000726 DATCUD010000000
VERSION     DATCUD010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2939
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49538"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..566)
                     /locus_tag="VIQ99_10555"
     CDS             complement(99..566)
                     /locus_tag="VIQ99_10555"
                     /inference="COORDINATES: protein motif:HMM:NF013981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-archaeol synthase"
                     /protein_id="HEY9183633.1"
                     /translation="MDIESAARALLLVCLASSTAWAASFVLGRHFAAPLDFGLELPDG
                     KRLFGSHKTWRGFAAGMFACALAAPFVGLEVVTGAAFGAAALAGDALSSAIKRRLALE
                     PGSEVPGLDQLPEALVPLVLLAEPLELGIVEITVVALAFVALDLLATPLRHGK"
     gene            complement(716..1075)
                     /locus_tag="VIQ99_10560"
     CDS             complement(716..1075)
                     /locus_tag="VIQ99_10560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183634.1"
                     /translation="MNTRTDIPATESPERASAKRLEDFAWAAFLIMTGALWLTPVDRV
                     PDGTWLIGTGVVLLGLNVARYFVGTATSGFTLLLGALALAGGVAQLLGVELPLMAVAL
                     IAFGASILVKLLFTGKR"
     gene            complement(1224..1826)
                     /locus_tag="VIQ99_10565"
     CDS             complement(1224..1826)
                     /locus_tag="VIQ99_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013654746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6448 family protein"
                     /protein_id="HEY9183635.1"
                     /translation="MDFQTIRSKTSLVVCGYFLGLVLLPSIATAHCDSLDGPVVRDAR
                     IALETRDATPVLKWITQEHEAEVVSVFEKSLAVRGKGDTARELADQHFFETLVRLHRA
                     GEGEPFTGLKPTGSTEPGIAAADAALAAGSGAELARALSAAIENGVNERFATARERQR
                     HAGDSVEAGRDYVEAYVDYVHFVETVESLATHGTPPVHHE"
     gene            complement(2423..>2939)
                     /locus_tag="VIQ99_10570"
     CDS             complement(2423..>2939)
                     /locus_tag="VIQ99_10570"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY9183636.1"
                     /translation="GCSLDVTSTVGRGTSFTVGVPRSDNRTMLANETGKTHPTAAPKG
                     ALVLVIDDEGAVADATAMLLGTAGLDVLVANGAQHALDRIVAKGRGPDLVICDYHLGG
                     RENGVDAIRLIREATRPALPAILVSGDTSAAIAKTVKGVDPCRVLNKPVDADELLDLS
                     AQLLSSDHTSA"
BASE COUNT          540 a          937 c          932 g          530 t
ORIGIN      
        1 ggtctcacgc gcgactccat ctcggttcga aacgactcga aggatcgatc gtcgtatgcg
       61 ctgctcctcg cgcgctcgcc cccaaaaaag ccgcaccgct attttccgtg acgcaagggc
      121 gtcgccaaca agtcgagtgc aacgaacgcg agcgcgacga cagtaatctc gacgatcccg
      181 agttcgagcg gctcggctaa caacacgagc ggcacgagcg cttcgggaag ctggtcgagg
      241 cccggcactt ccgagccggg ctcgagggcg aggcggcgct tgatcgcgct cgacaaggcg
      301 tcgccggcca gcgcggctgc gccgaacgcc gccccggtta cgacttcgag cccgacgaac
      361 ggcgcggcaa gtgcacaggc gaacataccg gcggcaaatc cgcgccaggt cttgtggctg
      421 ccaaacagcc gtttgccgtc cggcagctcc aggccgaagt cgagcggtgc ggcgaaatgg
      481 cgtccgagaa cgaagctcgc agcccatgcg gtcgagctgg cgaggcagac gagcagcaac
      541 gctcgggcgg cactttcgat gtccattcca ctagcaagac agcatgaccg tcgcgaagtc
      601 gcgctcaaca gccagtgcaa ctaggcctac gtagagcttc gtaccaacgt cggcaggctt
      661 agctattaga gtcccgcact cccggttttg cgtgagccga ggcgcgggct tgcggtcatc
      721 ttttgccggt gaacaacagc ttcacgagaa tgctcgcacc gaacgcgatc agggcgacgg
      781 ccattagcgg caattccacg cccagcagct gcgcgacgcc tccggccagc gctagagccc
      841 cgagcaggag cgtgaagccg ctggtggcgg tgccgacgaa atagcgcgcg acattgagtc
      901 ccagcaacac cacgcccgtt ccgatcaacc acgtcccgtc cggaacgcgg tcgacgggcg
      961 tgagccaaag cgctcccgtc atgatcaaga aggccgccca agcaaaatcc tccaagcgtt
     1021 tcgccgaggc tcgctcggga gactcagtcg ccgggatatc ggtacgcgtg ttcatcgttt
     1081 cgctatctcc gaatcgtggc tacggctcac gataatcggt tcgagcgcgc cggagccatt
     1141 gcggaacatg cgtacggccg tctctcgccg tgcggcatcg tcgcggcttt gcctccatgg
     1201 agatcgaatc caaaggcgcg gggctactcg tgatgcaccg gcggcgtgcc atgagttgcg
     1261 aggctttcga cggtctcgac gaagtgaacg taatcgacat aggcttcgac gtagtcccgc
     1321 cccgcttcga cgctgtcgcc tgcgtgccgc tgccgctcgc gcgcggtcgc gaaacgctcg
     1381 ttgacgccat tctcgatcgc agcagacagc gcgcgggcga gctcggcgcc cgaccccgca
     1441 gcgagcgcgg cgtcggccgc ggcgatgccg ggctcggtgc tgcccgttgg cttgagtccc
     1501 gtgaacggtt cgccttcgcc ggcgcggtgc agccgaacca gcgtctcgaa gaaatgctga
     1561 tcagcaagct ctctcgctgt gtcgcctttg ccgcgaaccg cgaggctctt ctcgaacacc
     1621 gagacaactt cagcctcgtg ttcttgggta atccacttca ataccggcgt tgcatcgcgt
     1681 gtttcgagcg cgatccgcgc atcgcggacg acggggccat ccaaggagtc gcagtgtgcc
     1741 gtggcgatgc tcggcagaag cactaggccg aggaagtagc cgcagaccac gagcgacgtt
     1801 ttcgatcgta ttgtttggaa atccatcagc gaaaccctcg cgatctcgta gaaatgtatc
     1861 tgtgaggctg cgccgcgtgg ttcaccggtg gaatacgcac ataccgataa gataccgacg
     1921 agctatggga tggaacgagg ttgccgaggc cgcctacgac ggctgtgaaa ccatgcgcag
     1981 gcggtttcct ggatttgctc ggctgtcgaa agatgagttc gcggtccgct accgatccac
     2041 gtctcgaagg gagtgcccgg tagtccacgc cattccaccc attcggttga ttggcgcgct
     2101 tcgacctgaa tggactcgtg cccgccaccc agttccacgg gataccgttg ccactcgccc
     2161 atgagtaagt aactccttgc gttcatgcca atcatcaaag aaccggcgag ggcgccggat
     2221 cattcatagc tgcgccacga tctgctgtag attggccaga agaccgacgc cacgctcatt
     2281 ccttgattgc gtccttctgg cgcggcacct cttcgagggg ttggcgatcg taacggggcc
     2341 atgatcgagg gacgcgggcg ccgatcacat acgtagtttg cgcgagtacc gtgctggacg
     2401 gctgctgcaa ccgtgccgca tctcaggccg acgtgtggtc cgagctcagt agctgcgcgc
     2461 tgaggtccag gagctcgtcg gcgtccacgg gtttgttgag cacgcggcag ggatcgaccc
     2521 cctttacggt cttggcgatg gcagcggagg tatcgccgct gacgagaatc gcgggcaacg
     2581 ctggtcgcgt cgcttcgcgg atgaggcgga tcgcgtcgac accgttctcc ctcccaccga
     2641 ggtggtaatc gcagatcacc aggtcgggcc ctcggccctt ggccacgatt cggtcgagtg
     2701 cgtgctgcgc gccgttggcg acgagtacgt cgaggcctgc tgtcccgagc aacattgcag
     2761 tggcgtcggc cacggctccc tcgtcgtcga tgacgagaac caacgcgccc ttcggcgctg
     2821 cggtggggtg tgtcttgccg gtctcgttcg ccagcatcgt tcggttgtcg gatcgaggta
     2881 caccgacagt gaaggatgtt ccgcggccga ccgtcgacgt gacgtcgagc gaacaaccg
//
LOCUS       DATCUD010000727         2341 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42458, whole genome shotgun sequence.
ACCESSION   DATCUD010000727 DATCUD010000000
VERSION     DATCUD010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42458"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1847
                     /locus_tag="VIQ99_10575"
     CDS             <1..1847
                     /locus_tag="VIQ99_10575"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HEY9183637.1"
                     /translation="NQAQRRNMHTSTKLVSLAALTAASIAAGAAAQTAQLTPPPKFTA
                     KDLTAPATTGWITNGGNLYNQRYSPLALIDKDNVANLKPAWRTHLNGSGTESKYSGQA
                     QPIVYDGVIYISTGANDVFALDADDGTILWTHEAHLDPNITVICCGWLSRGVGIGDGK
                     VFSGQLDGKLVALDAATGNVVWSIQAETNADGFSITTAPLYYDGLVITGFAGGDRASR
                     GRVKAYDARDGKLVWTFYTIPGPGEFGHDTWPLDNDSWEYGGAAVWQTPAVDPELGLV
                     YFSTGNPGPDLNGSVRKGDNLFSVSMVAIEAKTGEYRWHFQQVHHDLWDYDSPNPVVL
                     FDAPYNGVMRKGIVEIGKTGYVYILDRITGEPLIGIPEVPVPQEPRQHTAATQPVPVG
                     DEVIPHEIDIEPEGFKLINNGRIFTPFWDEPVVVKPLGTGGANWPPSSFDPTTNLFYV
                     CAGDGAAAYSTKEGGVEWVMPQPGGRYFGGEYTRSRVPRRGVLAAVDVTTNRLAWRQQ
                     WGELCYAGSTVTAGGLLFIGRNDGRLSALDKSSGEQLWEFETDAGIHAAVSTFERNGK
                     QYVVALSAGSFFPGTTRGDSVWMFALDGAGVTSGTSPDPSGGPADLTH"
     gene            complement(1851..>2341)
                     /locus_tag="VIQ99_10580"
     CDS             complement(1851..>2341)
                     /locus_tag="VIQ99_10580"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY9183638.1"
                     /translation="PIICSMAAAYGAQALGVAQSAVDALVEITSTKSPPEGPPLRERP
                     AVLAEIGRHSAALEAARLYVHACASQLWRTAVEGGPPALDQITGLWGAGLHAAEVAET
                     AVDTMYAAGGINSLYTSCPLERAHRDMHAMRRHIVGQALWLEDAGRVRLGARPKHPLY
                     AI"
BASE COUNT          400 a          831 c          777 g          333 t
ORIGIN      
        1 aaaaccaggc tcaacggcgc aacatgcaca cctccacaaa actggtttcc ctcgcagccc
       61 tgacggccgc atcgatcgcg gccggcgccg cagcgcaaac cgcgcagctc acgcctccgc
      121 cgaagttcac cgccaaggac ctcacggccc ccgccacgac gggctggatc acgaacggcg
      181 gcaacctcta caaccagcgc tactcgccgc tcgcgctgat cgacaaagac aacgtcgcga
      241 acctgaaacc cgcctggcgc acgcacctga acggctccgg caccgagagc aagtactcgg
      301 gccaagcgca gccgatcgtc tacgacggcg tgatctacat ctcgaccggc gcgaacgacg
      361 tgttcgcgct cgacgccgac gacggcacga tcctctggac gcacgaggcg cacctcgacc
      421 cgaacatcac ggttatttgt tgcgggtggc tgagcagggg cgtcgggatc ggcgacggca
      481 aagtgttctc gggccagctc gacggcaagc tcgtcgcgct cgacgccgcg accggcaacg
      541 tcgtctggtc gatccaagcc gaaacgaacg ccgacggctt cagcatcacg accgcgccgc
      601 tgtattacga cgggctcgtg atcacgggct tcgcgggcgg cgaccgcgcg agccgcggcc
      661 gcgtgaaggc ctacgacgcg cgcgacggca agctcgtctg gaccttttac acgatcccgg
      721 gccccggcga attcggccac gacacctggc cgctcgacaa cgacagctgg gagtacggcg
      781 gcgcggccgt gtggcagacg ccggccgtcg atcccgagct cgggctcgtc tatttctcca
      841 cgggcaatcc gggcccggac ctgaacggct ccgtgcgtaa aggcgacaac ctgttcagcg
      901 tctcgatggt cgcgatcgag gcgaagaccg gcgaataccg ctggcacttc cagcaggtgc
      961 atcacgatct gtgggactac gactcgccga atccggtcgt gctgttcgac gcgccgtaca
     1021 acggcgtgat gcgcaaaggc atcgtcgaga tcggcaagac cggctacgtc tacatcctcg
     1081 acagaatcac cggcgagccg ctgatcggca tcccggaggt gccggtgccg caggagccgc
     1141 gccaacacac ggcggccacg cagccggtgc ccgtaggcga cgaagtgatc ccgcacgaga
     1201 tcgacatcga gcccgagggc ttcaagctga tcaacaacgg ccggatcttc acgccgttct
     1261 gggacgagcc cgtcgtcgtg aagccgctcg gcaccggcgg cgcgaactgg ccgccgagct
     1321 cgttcgaccc gacgacgaat ttgttctacg tctgcgccgg cgacggcgcg gccgcgtact
     1381 cgacgaaaga gggcggcgtg gaatgggtga tgccgcagcc gggcggccgc tatttcggcg
     1441 gcgagtacac gcgctcgcgc gtgccgcgcc gcggcgtgct cgcggccgtc gacgtcacga
     1501 cgaaccgcct cgcgtggcgc cagcaatggg gcgagctgtg ctacgccggc tcgaccgtga
     1561 ccgcgggcgg tctgctgttc atcggccgca acgacggccg tctctccgcg ctcgacaagt
     1621 cgagcggcga gcagctgtgg gagttcgaga ccgacgccgg cattcacgcc gcggtcagca
     1681 cgttcgagcg caacggcaag cagtacgtcg tcgcgctgtc ggccggctcg ttcttcccgg
     1741 gcacgacacg cggcgacagc gtgtggatgt tcgcgctcga cggcgcgggc gtgacgagcg
     1801 gcacgagccc ggatccctcg ggcggccccg cggatctgac acactgacga tcagatcgcg
     1861 tacaacggat gtttcggcct tgcgccgagc cgcacgcgcc ccgcgtcttc gagccacaac
     1921 gcctggccga cgatgtgccg gcgcatcgcg tgcatgtcgc ggtgggcgcg ctcgagcggg
     1981 cacgacgtgt aaagcgagtt gattccgccc gccgcgtaca tcgtgtcgac ggctgtctcg
     2041 gcgacttcgg ccgcgtgcaa cccggcgccc catagaccgg tgatctgatc gagcgccggt
     2101 ggcccgccct cgacggccgt gcgccacaat tgcgacgcac acgcgtgcac gtacaggcgc
     2161 gccgcttcga gcgccgcgct gtgccgcccg atctcggcca gcacggccgg ccgctcgcgc
     2221 agcggcgggc cttccggtgg cgacttcgtg ctcgtgatct cgacgagtgc gtcgacggcc
     2281 gactgcgcga cgccgagcgc ctgcgcgccg tacgcggccg ccatcgagca gatgatcgga
     2341 a
//
LOCUS       DATCUD010000728         3227 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49543, whole genome shotgun sequence.
ACCESSION   DATCUD010000728 DATCUD010000000
VERSION     DATCUD010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3227
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49543"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VIQ99_10585"
     CDS             complement(<1..656)
                     /locus_tag="VIQ99_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019481909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEY9183639.1"
                     /translation="MKKFVNDPAKFVPEMLEGIFLANEGKLKYEPKYNLIYRADRPSK
                     NHVSVIQGSGSGHEPAHVMTVGPGMLDAASPGNVFAAPPMEYCLECIKLMNSPKGVLV
                     LINNYQGDRMNWDMAIEMAEAEGIKVKSFIIDDDVAVQNSSYTVGRRGVAGNFFVMKA
                     CGAAAEKGASLEQLLALAKKVNANVRSMGVALTSCTPPAKGKPIFEIGDDEMEVGVGI
                     "
     gene            complement(683..1351)
                     /gene="dhaL"
                     /locus_tag="VIQ99_10590"
     CDS             complement(683..1351)
                     /gene="dhaL"
                     /locus_tag="VIQ99_10590"
                     /inference="COORDINATES: protein motif:HMM:TIGR02365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004371 - glycerone kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaL"
                     /protein_id="HEY9183640.1"
                     /translation="MKEITLADVETAVKTIAATALKNEQYFCELDSYAGDADFGVSLA
                     SGFRAIEQEWQALDHSSIGALLLKISMVISKNVGGCSGPIWGTAFMRAGALSKDRTTI
                     TLDDLDKMLTAAIEGIQKRGGAQLGDKTLLDSLIPIRDLVHEHAGYPDANPSEVLQRA
                     TAVANEAIERTKPWVAKRGRQQFTGDRSIGTPDPGIVAIATMMNDLCTQFGVANPASS
                     KSKN"
     gene            complement(1385..2092)
                     /locus_tag="VIQ99_10595"
     CDS             complement(1385..2092)
                     /locus_tag="VIQ99_10595"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEY9183641.1"
                     /translation="MIFDCDGVLVDTERDGHRVAFNRAFAAAGIDAEWSVELYGELLK
                     IAGGKERMTHYFNQHGWPDGKTAETLIPELHKKKTAIFTDLIAKGSLPLRPGIGRIVD
                     EAHAAGVRLGVCTTSDPKAIDGVLDLFGAARKKWFEIVLAGDIVKKKKPDPEIYNLAK
                     QRLGLPGRDCVVVEDSRNGLLASLGAGMPTLITTSTYTKDEDFEGAAKVVPELGDPPN
                     VLVTLSDLKAIAGQRAA"
     gene            complement(2120..2989)
                     /locus_tag="VIQ99_10600"
     CDS             complement(2120..2989)
                     /locus_tag="VIQ99_10600"
                     /inference="COORDINATES: protein motif:HMM:TIGR00167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HEY9183642.1"
                     /translation="MPLVNLKPVLREAKAKGYAVAAFNPVDYASMKAMVKAAEELKAP
                     VIIQSSAKTIKYYGHKAMITWMREIADDSPVPVVLHLDHGKDLEMIEKCVKSGWTSVM
                     IDWSDKPFDVNLEATRKVVDMATKAGIGVEAEIGEIHGVEDDMVVEAVHYTDPAQAEK
                     FCRELDLAAFAAAIGTAHGYYKGEPDVKFDLIAEINRRTNTPMALHGGTGLNDEIIQK
                     CIKLGCAKINISTNLKHVFIDSFIDYHQKNKKYEPLHVLGAQYEALKTLFKEKIAQFG
                     GTNRASELLSKVA"
BASE COUNT          481 a         1048 c         1010 g          688 t
ORIGIN      
        1 tgaatgccga cgccgacttc catctcgtcg tcgccgatct cgaagatcgg cttgcccttc
       61 gcgggcggcg tgcacgacgt gagcgcgacg cccatcgagc gcacgttcgc gttgaccttc
      121 ttcgcgagcg cgagcagctg ctccaagctc gcgcctttct cggcggcggc gccgcacgct
      181 ttcatcacga agaagttgcc ggccacgccg cggcggccga ccgtgtacga gctgttctgc
      241 acggccacgt cgtcgtcgat gatgaacgac ttgaccttga tgccctcggc ctcggccatc
      301 tcgatggcca tgtcccagtt catccggtcg ccctggtagt tgttgatcag cacgagcacg
      361 cccttcggcg agttcatgag cttgatgcac tcgaggcagt actccatcgg cggcgccgcg
      421 aagacgttgc cgggggaggc cgcgtcgagc attccgggcc cgacggtcat gacgtgcgcg
      481 ggctcgtggc cgctgcccga gccctgaatc acggagacgt ggttcttgct cggccggtcg
      541 gcgcggtaga tcaggttgta cttcggctcg tacttgagct tgccttcgtt ggcgagaaag
      601 atgccctcga gcatctccgg aacgaatttg gccggatcgt tgacgaactt cttcatgatg
      661 gttcccccga agtggtgacg ttctagttct tgctcttgct cgacgccggg ttcgcgacgc
      721 cgaactgcgt acacaagtcg ttcatcatcg tggcgatcgc cacgatgccg ggatcgggtg
      781 tgccgatgct gcgatctccg gtgaattgct gccggccgcg cttcgcgacc cagggcttcg
      841 tgcgctcgat cgcttcgttc gcgacggccg tcgcgcgctg cagcacctcg ctcgggttcg
      901 cgtcgggata gcccgcgtgc tcgtgaacga ggtcgcgaat cgggatcagc gaatcgagca
      961 gcgtcttgtc gcccaactgc gcgccgccgc gtttctggat gccttcgatc gcggccgtca
     1021 gcatcttgtc gaggtcgtcg agcgtgatcg tggtgcggtc cttcgacagc gcgccggcgc
     1081 gcatgaaggc cgtgccccaa atcgggcccg agcagccgcc gacgttcttc gagatcacca
     1141 tgctgatctt caggagcaac gcgccgatcg agctgtgatc gagcgcctgc cattcctgct
     1201 cgatggcgcg gaagccggaa gccagcgaca cgccgaagtc ggcgtcgccc gcgtacgagt
     1261 cgagctcgca gaagtattgc tcgttcttga gcgccgtcgc cgcgatggtc ttgaccgctg
     1321 tttcgacgtc cgccagggtg atctctttca tatttcttct cctcgacaag cgccggaatt
     1381 cagtctacgc cgcgcgttgt cccgcgatgg ccttcaaatc gctgagcgtg acgagaacgt
     1441 tcggcgggtc gccgagctcc ggcacgacct tggccgcgcc ctcgaagtcc tcgtccttcg
     1501 tgtacgtgct cgtcgtgatc agtgtcggca tgccggcgcc gagcgatgcg agcaagccgt
     1561 tacggctgtc ctcgacgacg acgcagtccc ggccggggag cccgagcctc tgcttcgcga
     1621 gattgtagat ctcgggatcc ggtttctttt tcttcacgat gtcgccggcg agcacgatct
     1681 caaaccattt cttgcgcgcc gcaccgaaaa gatcgagcac gccgtcgatg gctttcgggt
     1741 ccgacgtcgt gcagaccccg agccgaactc cggctgcgtg cgcctcgtcg acgatccggc
     1801 cgatgccggg gcgcagcggc aggctgccct tcgcgatcag gtccgtgaag atcgcggtct
     1861 tctttttgtg cagttccggg atcagcgtct cggccgtctt gccgtccggc caaccgtgct
     1921 ggttgaagta gtgcgtcatg cgctctttgc cgcccgcgat cttcaggagc tcgccgtaca
     1981 gctcgacgct ccattccgcg tcgatgccgg cggctgcgaa cgcgcgattg aacgcgacgc
     2041 gatgcccgtc gcgttcggtg tcgacgagca caccgtcgca gtcgaagatc aacgccttca
     2101 tagccgaacg aaagttcgct caggcgacct tcgacaacag ctcgctggcg cgattcgtgc
     2161 cgccgaactg cgcgatcttt tccttgaaca gcgtcttcag cgcttcatac tgagcgccga
     2221 gcacgtgcag cggctcgtac tttttgttct tctggtgata gtcgatgaag ctgtcgatga
     2281 acacgtgctt caagttcgtc gagatgttga tcttcgcgca cccgagcttg atgcacttct
     2341 gaatgatctc gtcgttcagg cccgtgccgc cgtgcagcgc catcggcgtg ttcgtgcgcc
     2401 gattgatctc cgcgatcagg tcgaacttca cgtccggctc gcccttgtag tagccgtgcg
     2461 cggtgccgat cgcggccgcg aacgcggcga gatcgagctc gcggcagaat ttctcggcct
     2521 gcgcgggatc ggtgtagtgc acggcctcga cgaccatgtc gtcttcgacg ccgtggatct
     2581 cgccgatctc ggcctcgacg ccgatgccgg ccttggtcgc catgtcgacg accttgcgcg
     2641 tggcttcgag attcacgtcg aacggcttgt ccgaccagtc gatcatgacc gacgtccagc
     2701 cgctcttgac gcacttctcg atcatctcga ggtccttgcc gtggtccaag tgcagcacga
     2761 ccggcaccgg cgaatcatcg gcgatctcgc gcatccaggt gatcatggcc ttgtgcccgt
     2821 agtacttgat ggtcttcgcc gagctttgaa tgatcacggg ggccttgagc tcctccgcgg
     2881 ccttgaccat ggctttcatc gacgcatagt cgactggatt gaaggcggca acggcgtagc
     2941 ccttggcttt tgcttcgcgc aggacaggct tcagattgac caacggcatg gcgttatctc
     3001 ctcgaaaaac gcgacgggat atggctgcct aatatacgtc agccccgaca tggtgtcgcc
     3061 cttgagactg gtccgcgggc cgcgcccgcg ctcgttcaac ggcgcccggc ccaaggcgcc
     3121 ccgtgcgtct ttttcggccg ctgtccgccg cgcgcgtgac gctcggcgcc gtggcgcggc
     3181 gcgtgaccgc ggtgggcgtg acgctggtgc cgttggtcgg ggcgctg
//
LOCUS       DATCUD010000729         3788 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63398, whole genome shotgun sequence.
ACCESSION   DATCUD010000729 DATCUD010000000
VERSION     DATCUD010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3788
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63398"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..472
                     /locus_tag="VIQ99_10605"
     CDS             <1..472
                     /locus_tag="VIQ99_10605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183643.1"
                     /translation="SIMTQPYPIEILYTPGKVTILIEAYAQWRQIFTDGRGHPEDPDL
                     TFNGHSIGHWEGDTLVVDTVGFVTDTFLGNQGQRHSEKMHIVERFKLANPDVLEVQTT
                     ITDPEALTKPLVRTATYGRHRDWTLAEYVCQQNNRNFTTDDGKSGIDLSFEEKE"
     gene            469..909
                     /locus_tag="VIQ99_10610"
     CDS             469..909
                     /locus_tag="VIQ99_10610"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY9183644.1"
                     /translation="MRTTTVRSGRGRTLRHVGMVLGSVVGILALAAWTSRAEAHHSFS
                     VFDMQTNKELEGEVIELQWTNPHIFLWIDVTNADGTKTRWGLEGMSPNYLGRRGWTKN
                     TFEPGDHVKVVVWPLKSGEPGGTLQKATFDDGTEVVNFGNRGGG"
     gene            1163..1239
                     /locus_tag="VIQ99_10615"
     tRNA            1163..1239
                     /locus_tag="VIQ99_10615"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1197..1199,aa:Arg,seq:tcg)
     gene            1482..1703
                     /locus_tag="VIQ99_10620"
     CDS             1482..1703
                     /locus_tag="VIQ99_10620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module protein"
                     /protein_id="HEY9183645.1"
                     /translation="MRAVADIEKEILALNEEQRARLAVSILDSLPGVLADEDEGIAEA
                     LRRDAELEAEPESALSLERLDDLIRDRRG"
     gene            1751..1996
                     /locus_tag="VIQ99_10625"
     CDS             1751..1996
                     /locus_tag="VIQ99_10625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183646.1"
                     /translation="MDHYEEVGSERLAEEFYAELRRFFLKAKTAPEQYAIRARDLRRV
                     NLDRFPYHFLYRIVEDRVRVLVVRHHNRRPSFATSRR"
     gene            complement(2161..3510)
                     /locus_tag="VIQ99_10630"
     CDS             complement(2161..3510)
                     /locus_tag="VIQ99_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017505849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEY9183647.1"
                     /translation="MDSPRPLALLFRALAALALSLAANAQDIVRMRDVVRHCVDDKTF
                     MGAVLVARDGEMLLNEGFGFANIEWQIPNTPTTKFRLGSITKQFTAAAILLLAERGKL
                     SLDDPIRKHWPDAPGAWDSVTIYHVLTHTAGISNLTSFPEFATFRVSPSPVEKTIALF
                     KDRPLEFVPGSQMRYSNSGYVLLGYLIERISGQSYAAFLRENIFEPLGMQDTGYDEHA
                     AIIERRAAGYSPSPNGFVNSPYVDMTIPGGAGGLYSTTEDLLRWTQGLFAGTLLTGAS
                     LEKMTTPFRDNYALGVNVTERNGRKAIGHNGGIEGFNTSLAYYPAEKLTIVVLGNLNG
                     GAPTQIASQVAAVMFGEPIALPSARTEVQLPPEVLDDYAGAYPLAPNFILTVTVVNGG
                     LISRATGQVEVPFYAEAKDKFFARALDAQIEFVRSDDGNVNGLILQQGQTKMRASRQ"
     gene            complement(3567..>3788)
                     /locus_tag="VIQ99_10635"
     CDS             complement(3567..>3788)
                     /locus_tag="VIQ99_10635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183648.1"
                     /translation="EPAEISDPGETRIQLRVANIDAAAAAIVQAGGTFVSTGGRPLDL
                     PAGESTLKVGMVRDPDGLFLVLIQAPPAP"
BASE COUNT          739 a         1165 c         1198 g          686 t
ORIGIN      
        1 gtcgatcatg acgcagccgt atccgatcga aatcctgtac acgccgggca aggtcacgat
       61 cctgatcgaa gcgtatgcgc agtggcggca gatcttcacg gacggccgcg ggcaccccga
      121 ggatcccgat ctcacgttca acggccactc gatcgggcat tgggaaggcg acacgctcgt
      181 cgtcgacacg gtcggcttcg tgaccgacac gttcttgggt aatcaaggtc aacgccatag
      241 cgagaagatg cacatcgtcg agcgcttcaa gctcgcgaac cccgacgtgc tcgaggttca
      301 gacgacgatc accgatcccg aggcgttgac gaaaccgttg gtgcggacgg cgacctacgg
      361 ccgtcatcgc gactggacgt tggccgagta cgtgtgccag cagaacaaca gaaacttcac
      421 gaccgatgac ggcaagtccg gcatcgactt gagcttcgag gagaaagaat gagaacgacg
      481 actgtccgca gcggtcgcgg tcgcacgctg cgtcacgtgg gaatggtgct cggcagtgtc
      541 gtcggcatac tcgcgctcgc ggcgtggacg tcgcgcgccg aggcgcacca ctcgttcagc
      601 gtgttcgaca tgcagaccaa caaggagctc gagggcgagg tcatcgagct ccaatggacg
      661 aacccgcaca tcttcttgtg gatcgacgtc acgaacgccg atgggacgaa gacgcgctgg
      721 ggcctggaag gcatgagccc gaactacttg gggcgtcgcg gctggacgaa gaacacgttc
      781 gagcccggcg accacgtcaa ggtcgtggtc tggccgctca agagcggtga gcccggcggc
      841 acgctgcaga aggcaacgtt cgacgacggc accgaggtcg tgaacttcgg caaccgcggc
      901 ggcggctaag ccggagcgcg gcccgcgcgc gatcaaagcg taggcagggg aggcaggcga
      961 gttgatccca gcgccggcgc agctccgccc gcgacaagcg gtattcgttc tccggctcag
     1021 cggcggtggc gttcattgat ctcatccgag gagaggcgtc ccgattctgc gcgccgcctt
     1081 cgggctcgcg caacgcggga atccggccga atcgccgaga aacgcgccag gcacgggcgc
     1141 gctccgttac aatcccggcc acgcgcccgt agctcagttg gatagagcat caggcttcga
     1201 acctgagggt cgggagttcg agtctctccg ggcgcgccaa ttcgcgaatg tccaccttcg
     1261 ctggccaagc ggtcgctcgg tcgctgaggc tggcacctgg cggagtgacc gcaatcgacc
     1321 caagccggtc gttccgacct gtgcttcgcc ctccaaaaaa gagcagcgag accgggcggt
     1381 gctatttgcg tggattaccg agaaatgaag tgaccctggc atgggggttc cgacttatac
     1441 tcataagaaa caaccgctcg gcactacgat cgaggcccaa tatgcgtgca gtcgcggaca
     1501 tcgagaaaga aattctcgcg ttgaacgagg agcaacgtgc tcgcttggcc gtaagtattc
     1561 tcgattcact tccgggtgtt ctcgccgatg aggacgaggg aatcgctgag gcgttgcggc
     1621 gtgacgcaga gctcgaagca gaaccagaat cggctctttc cctcgaacgg ctcgatgact
     1681 tgatccgtga ccgacgcggt tgatgcgtct cacgtttcat ccgaacgttg cggcggacat
     1741 ctctcgcatc atggaccact acgaggaagt gggcagtgag cggcttgctg aggagttcta
     1801 cgccgaactg cgcagattct tcctgaaggc taaaacggct ccagaacaat acgcgatccg
     1861 ggcgcgagac ttgcgaagag tcaacctcga tagatttcca taccattttc tgtatcgcat
     1921 cgtcgaagac cgcgtacgag tgctggtcgt acgccatcac aaccggcgcc catcatttgc
     1981 gacttcgcgg cgctgacgcg cccgcggtgc cagtcagcga gcgtcacgac gaacggcgac
     2041 ctctggccga actggcgcga agccgcctgc ctgtgccagc gcgcgacgag cgacgggaat
     2101 gccatcgagt cgcgccgttc gctcgctgaa tagctgcgcg atgaccggtg tctgcaaggc
     2161 ctattgccgc gacgcgcgca ttttcgtctg gccttgttgc aggatcaaac cgttcacgtt
     2221 gccgtcgtcg ctgcgcacga attcgatctg cgcatcgagg gctcgtgcga agaatttgtc
     2281 cttcgcctcg gcataaaacg gcacttcgac ctggccggtc gcgcgggaga tcagtcctcc
     2341 gttcacgacg gttacagtca aaatgaaatt cggcgcgagc ggataggcgc ccgcgtagtc
     2401 gtcgagcacc tcgggcggaa gctgcacctc ggtccgcgcc gaaggcagtg cgatgggttc
     2461 accgaacatc acggcggcaa cctggctggc gatttgagtc ggagctccgc cgttcaggtt
     2521 gccgagcacc acgatcgtga gtttctctgc gggatagtac gcgaggctcg tgttgaatcc
     2581 ctcgataccg ccgttgtggc caatcgcttt ccggccgttt cgctcggtca cattcactcc
     2641 gagcgcgtag ttgtccctga aaggcgtggt catcttttcg agtgacgcac ctgtcagcaa
     2701 cgtgccagcg aacagccctt gcgtccagcg caacaggtct tccgtcgtcg aatagagtcc
     2761 acccgcgccg ccgggaattg tcatgtcgac atacggcgaa ttcacgaaac cgttcggtga
     2821 agggctgtat ccggcggcgc gccgctcgat tatggctgcg tgctcatcgt agcctgtgtc
     2881 ctgcatgccg agcggctcga agatgttctc acgcaagaac gccgcgtagc tctggccgct
     2941 gattcgttcg atcaggtatc cgagcagcac gtagccggag ttgctgtacc gcatttgcga
     3001 gcctggcacg aactcgagcg gccggtcctt gaagagcgcg atcgtcttct ccacgggcga
     3061 cggcgagacc ctgaacgtag cgaactccgg gaaggacgtg aggttcgaaa tgcccgccgt
     3121 gtgcgtgagc acatggtaga tcgtcacgga gtcccaggcg cccggcgcat cgggccaatg
     3181 ctttctgatc ggatcatcga gcgagagttt gccgcgctct gcgagtagca gaatcgctgc
     3241 ggccgtgaac tgcttggtga tcgagcccaa gcggaatttc gtcgtgggtg tattcgggat
     3301 ttgccactcg atgttcgcga acccgaaacc ctcgttcagc agcatttcgc cgtcgcgtgc
     3361 gacgagcacc gcgcccatga acgtcttgtc gtccacgcag tggcgcacga catcgcgcat
     3421 tcgcacgatg tcctgcgcat tcgccgcaag cgaaagcgcc aacgcggcca gggcgcgaaa
     3481 caggagggcg agcggtcgtg gagagtccat cgagatatgc tccgactgcg tgggctaacg
     3541 cccttacacc gcgaccccgc gcatcatcac ggcgccggcg gcgcctgaat cagcacgaga
     3601 aacaggccgt cgggatcgcg caccatgccg accttgagcg tcgactcgcc cgcgggaaga
     3661 tcgagcggcc gaccgccggt cgagacgaat gtcccaccgg cctgcacgat ggcggcagcc
     3721 gccgcatcga tgttcgcgac gcgaagctgg atccgtgtct cccccggatc tgagatttcg
     3781 gccggctc
//
LOCUS       DATCUD010000730         1502 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85165, whole genome shotgun sequence.
ACCESSION   DATCUD010000730 DATCUD010000000
VERSION     DATCUD010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85165"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1353
                     /locus_tag="VIQ99_10640"
     CDS             <1..1353
                     /locus_tag="VIQ99_10640"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY9183649.1"
                     /translation="YVDFDHGLNNAINRLRRALNDSAETPTYLETLPRVGYRFIHPID
                     AADANAAPLAAAGRLGHDRWTRHTAAVVATCSGIIALAFAVGWWVGQSASGHGPPADS
                     SPAVSEEAREAYQRGIELFEQRRKESTELSIEHLRRAVHADPNFAAAHAALAMSYALA
                     GGHTLARYRSPSDVLGPALAAAHRALQLDPNLPQGHLALAHVLNQLMPWSADSDLVIE
                     SSYQRALELDGTDANAHLFFGNFLSTRGRNAEAIGEFRLALASNPLSPSANSRLGMEL
                     MAIGDVDEGIEFLRKTVELDPWQFNAQVRLGWGYLALADLDAAELAFQAAERISPDSM
                     QSEAGLAVAAARRGDVARARALLERMLPAASASEDPFGVAMVYVALKDTELSIEWLRR
                     TARTSRTLHMAGQWGIRSSIYDWLRGDPRFAEIEREVSATAKPAQEAGNGPSSSSIRD
                     "
BASE COUNT          243 a          506 c          483 g          270 t
ORIGIN      
        1 tacgtcgact tcgatcatgg gctcaacaac gcgatcaatc ggctcagacg agcgctgaac
       61 gactctgccg agacgcccac ctacctcgaa accctgccgc gggtcggcta ccgcttcatt
      121 catccgatcg acgccgccga cgcgaacgcc gctccgcttg cggccgccgg tcggctcggg
      181 cacgatcgtt ggacgcgcca caccgccgcg gttgttgcaa cctgcagcgg catcatcgcg
      241 cttgccttcg ccgtcggctg gtgggtgggc cagtccgcca gcggtcatgg tccgccagct
      301 gattcgtcgc cagcggtgag cgaagaggcc cgcgaggctt accagcgcgg catagagctc
      361 ttcgagcaac gacggaagga gtcgaccgag ctcagcatcg agcacctgcg ccgcgcggtc
      421 cacgcggatc cgaatttcgc ggcagcgcat gccgccctcg cgatgtcata tgcgctcgcc
      481 ggcggccata cgctcgcgcg ctatcgaagc ccgagcgacg tcctgggtcc tgcgttggcc
      541 gcggctcatc gcgcactcca gctcgatccc aatctgccgc agggacacct tgcactcgcg
      601 cacgttctga accaactcat gccgtggtct gcggatagcg atcttgtgat cgagagctcc
      661 taccagcgag cattggagct cgacggcacg gacgcgaatg cacacctgtt tttcggcaac
      721 tttctctcga cgcgcggtcg caatgccgag gcgatcggtg aattccggct cgcgctcgcg
      781 tcgaatccac tctcgccgag cgccaacagt cgcctcggca tggagctcat ggcgatcggc
      841 gatgtggatg agggcatcga gttcttgcgc aagacggtcg agctcgatcc ctggcagttc
      901 aacgctcagg tgcggctcgg ctggggatat ctcgctctcg cggacctcga tgctgccgag
      961 ctcgcgtttc aggccgctga acgcatttcc ccggatagca tgcagtcgga agcggggctc
     1021 gccgtcgcag cggcgcgcag aggcgatgtc gctcgcgctc gcgcgttgct cgagaggatg
     1081 ctgccggctg cctccgcgtc ggaggatccg ttcggcgtag cgatggtcta cgttgcgctc
     1141 aaggacaccg agctctcgat cgagtggctc cgacgaaccg cccggacgtc gcggactctg
     1201 cacatggccg ggcaatgggg aattcggtcg tcgatctacg attggctgcg cggggatccg
     1261 cgcttcgccg aaatcgagcg cgaggtctcg gctaccgcga agccggccca ggaggcaggt
     1321 aacgggccgt cctcgagttc gatcagggac tagggctgcc aagcggcgtt tcggccgttg
     1381 gacacgatcg tgccccgggc gctaccgtcg ctcctgatcc acgccacgtc ttgcactccg
     1441 ttgccgccgg tcgtgaacgc gatcatggtg ccgtccgagg accacgacgt tttcgaccaa
     1501 gg
//
LOCUS       DATCUD010000731         2505 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_21235, whole genome shotgun sequence.
ACCESSION   DATCUD010000731 DATCUD010000000
VERSION     DATCUD010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21235"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..460
                     /locus_tag="VIQ99_10645"
     CDS             <1..460
                     /locus_tag="VIQ99_10645"
                     /inference="COORDINATES: protein motif:HMM:NF013731.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein CheW"
                     /protein_id="HEY9183650.1"
                     /translation="DEWVGIGFRLGAERFVTSRADVREVLPIPDQITRVPGAKPWLRG
                     IANLRGQLLTVVDLKSFLGAGAPSSDRQARVLVVASRDVPTGLIVDEVVGFRRFGASD
                     YRPEVSPGVIRCEHYLEGSYRRGTELWPRFSLLKLLEDPLFLTAGEAVRA"
     gene            465..>2505
                     /locus_tag="VIQ99_10650"
     CDS             465..>2505
                     /locus_tag="VIQ99_10650"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098561 - methyl accepting chemotaxis
                     protein complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEY9183651.1"
                     /translation="MNYSGLWPKLVPVLGLALAAALLVAAVAVWWNGDAGGSEGGLGK
                     LVAITQSARTDARDAISGDASAFDSLNTSRAAMQRLRSAVASDETAGDAARRLAGDTT
                     LWQRLDSSIAALLDLRGKFDELEAAREEVADLAPELLVSVGNVASVLTPADLATNQPY
                     IARFELTVESLQQNVRSLGPGVAVDEVVSRIGDAEQYLSQFVRGLRGEDATLGVVPVR
                     SASADSDLTAIDGLLERARKGIAAVGVGAETLAAAEGAAAELDAAASELLARYVDVGP
                     SGVSGGGMGWLPLLLVVAALMIAALMAFVYYRTRDLGRAAESQAEQNERNQQAILRLL
                     DELSSLADGDLTVQATVTEDITGAIADSINYAIEALRELVTTINDSSILVDAASKQTE
                     GTSRHLLRSAETQAKQAAAASESMARMAISIEEVAGNAERCSDVARHSVEIAHKGGEA
                     VRRTIAGMNTIRETIQDTSKRIKRLGESSQEIGNIVELIEEIAEQTNILALNASIEAS
                     RAGEASRGFAVVADEVQKLAERSTAATKKIEVLVSTIQSDTNEAVMSMERSTTDVVGG
                     ALLAENAGASLDEIEQVSHQIASLVHNISGSAKEQTSVASAITKNMHVLREISSKTNE
                     STAATSTAISKLSELASQLRRSVAGFRLPDQSGGTGVLSPEHVAASLERGGKATPP"
BASE COUNT          449 a          791 c          876 g          389 t
ORIGIN      
        1 ggacgagtgg gtcggtatag gcttcaggct cggcgccgag agattcgtga cgagtcgcgc
       61 ggacgttcgc gaggtgctgc cgatccctga tcaaatcacg agagtgcccg gcgccaaacc
      121 atggttgcgc ggcatcgcga acctgcgcgg gcaactgctg acagtggtcg atctgaagtc
      181 ttttctcggc gcgggcgcgc cgtcgtcgga ccgccaagcg cgcgtgttgg tcgtcgcgag
      241 ccgagacgtc ccgactgggc tcatcgtcga cgaggtcgtg ggatttcggc gtttcggggc
      301 ctcggactac cggcccgagg tgtcgccggg cgtgattcgc tgcgagcact atctcgaagg
      361 aagctaccgc cgcggcaccg agctatggcc acggttcagt ctgctcaagt tgctcgagga
      421 tccattgttc ctcacggccg gcgaagcggt gagggcttga ggcgatgaac tactcgggcc
      481 tgtggccgaa gctggtgccg gtcttgggac tggcgctcgc cgccgcgctg ctggtcgcgg
      541 ccgtggccgt gtggtggaac ggcgacgcgg gcggcagcga aggcgggctc ggcaagctcg
      601 tcgcgatcac gcagtctgcc cgcacggatg cccgcgacgc gatctcgggc gatgcctcgg
      661 cgttcgactc gttgaatacg agccgcgcgg cgatgcagcg gttacgcagc gcggtcgcga
      721 gcgacgagac ggccggcgac gcggcgcgaa ggctcgcagg cgataccacg ctgtggcagc
      781 ggctcgattc gagcatcgcg gcgctgctcg acctgcgcgg caagttcgac gagctcgagg
      841 cggcgcggga ggaagtggcc gatctcgcgc ccgagttgtt ggtcagcgtg ggcaatgtcg
      901 cgagtgtcct gacaccagcg gatctcgcga ccaaccaacc gtatatcgcg cgcttcgagc
      961 tcaccgtcga atcgttacag cagaacgtcc gctcgctcgg gccaggcgtt gccgtcgacg
     1021 aagtcgtgag ccgcatcggc gatgccgagc aatacttgag ccaattcgtg cgcggcttgc
     1081 gcggcgagga cgccacgctc ggcgtagtgc ccgtgcgcag cgcatcggcc gacagcgacc
     1141 tcacggcgat cgacggtttg ctcgagcgag cacgcaaggg catcgccgcg gtcggcgtcg
     1201 gcgccgagac actcgcggcc gccgaaggag ccgcagccga gctcgatgcg gcagcgtccg
     1261 agctccttgc gcgctacgtc gacgtcgggc ccagcggcgt cagcggcggc ggcatgggct
     1321 ggctgcccct gctgctcgtc gtcgcagcgt tgatgatcgc ggcgctgatg gcgttcgtct
     1381 attacagaac gcgtgatctc ggtcgtgctg ccgagagtca ggcggagcag aacgaacgca
     1441 atcaacaggc aatcttgcgt ctgctcgacg agttgtcgag cctggccgac ggcgacctca
     1501 ccgttcaggc caccgtgacc gaggacatta cgggcgcgat cgccgactcc atcaactatg
     1561 cgatcgaagc tttgcgcgag ctcgtcacga cgatcaacga ttcttcgatt ctcgtcgacg
     1621 ccgcatcgaa gcaaaccgaa ggcacgtcgc gccacttgct gcgctcggcg gaaacgcagg
     1681 cgaagcaggc cgccgcggcc tcggaatcga tggcgcgcat ggcgatttcg atcgaggagg
     1741 tcgcgggcaa cgcggaacgc tgctccgacg tcgcacgcca ctccgtcgaa atcgcgcaca
     1801 aaggcggcga ggcggtgcgt cgaacgatcg cgggcatgaa cacgattcgc gagacgatcc
     1861 aggacaccag caagcggatc aagcgcctcg gcgagagctc gcaggagatc ggcaacatcg
     1921 tcgagctgat cgaagagatc gccgagcaga cgaacatcct cgcgttgaac gcttcgatcg
     1981 aagcgtcgcg ggccggcgag gccagccgcg gcttcgccgt ggtggccgac gaggtgcaaa
     2041 agctcgcgga gcgctcgact gcggctacga agaagatcga agtgctcgtc agcacgattc
     2101 agtcggacac gaacgaagct gtgatgtcga tggagcgcag cacgacggac gtcgtcggcg
     2161 gcgcgttgct cgccgagaac gccggtgcat ctctcgacga gatcgagcag gtctcgcacc
     2221 agatcgcgag cctcgtccac aacatctcgg gttcggccaa ggaacaaacg agcgttgcga
     2281 gcgcgatcac gaagaacatg cacgtgctgc gcgaaatcag ctcgaagacc aacgagtcga
     2341 ctgcggccac gtccacggcc atcagcaagc tctcggagct cgcgtcgcag ctgcgccgca
     2401 gcgtcgccgg gttcaggttg ccggatcaga gcggcggaac cggcgtgttg agccccgaac
     2461 atgtcgcggc cagcctcgaa cgcggcggca aggcgacgcc gccgg
//
LOCUS       DATCUD010000732         2201 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35416, whole genome shotgun sequence.
ACCESSION   DATCUD010000732 DATCUD010000000
VERSION     DATCUD010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2201
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35416"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..987
                     /locus_tag="VIQ99_10655"
     CDS             <1..987
                     /locus_tag="VIQ99_10655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183652.1"
                     /translation="DASGLPRSEQMVLTERLRVLPDGRLEDRITIDDPDTFTQPWETV
                     LHFRRDAAARVTDDVCPDRIAAGEPAVRKELPPAASSSARPAPAATPADTAAAVPRLG
                     GIWEPRTFGFLVPEAPLSAAGKAFVDRNAAAMSAGSIMHTAWTSCRPGAVSTMTMPRE
                     KIVVLQSPEELTILYEMPRMARRVRMNATHPENLQPSYVGDSIGHWEGNTLVIDTVGF
                     NGYAELDSRGQPTSPALHTVERLTPVADGSGIDIEVTITDPEYYDEPFTIKRAWNRSS
                     ATHPLEYDCSENPRAEDFENAYYVRDRYRPTCMRVKGEGAELSRVVCRRPEE"
     gene            1124..>2201
                     /locus_tag="VIQ99_10660"
     CDS             1124..>2201
                     /locus_tag="VIQ99_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010545072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY9183653.1"
                     /translation="MQQANILVIGAGIGGLTAAIALGRRGFRVELIERDPGWSVYGVG
                     IIQQSNVIRAMHVLGILQDYLDAGVGFDHVDIFAPDGRRLARVPSPKLVPEHPANVGI
                     GRRALQGVLARRAREAGAELRLGIEATRLDDDGNGVGVQFSDGSTARYDLVIGADGLY
                     STTRGMLFPDAPQPELTGQGVWRYNFPREPGLDALAAYEGPIGMGLVPLSKELMYLYV
                     TSPEPGNPRYPREGLARAMRDKLKNAPPRIAALAAGITDDAGVVYKPLEWLYLDGPWH
                     KGRVVLLGDAVHATTPHLGQGAGMAIEDGIVLAEELAQQTTPQAAFTAWQARRVERCR
                     YIVEQSKLIGDSQLGLSPPVDQSAA"
BASE COUNT          381 a          735 c          740 g          345 t
ORIGIN      
        1 gacgcatcgg gtctgccgcg ttcggagcag atggtgctca cggagcggct gcgcgtgttg
       61 cccgatgggc gcctcgagga ccgcatcacg atcgacgacc cggacacctt cacgcagccg
      121 tgggagacgg tgctccactt caggcgcgac gccgctgcgc gagtgaccga cgatgtctgc
      181 cccgatcgaa ttgctgcggg ggagccagcc gttcgcaagg aattgccgcc ggcagcatca
      241 agcagcgcga ggccggcgcc tgccgcgacg ccggccgata ccgctgccgc cgtaccgcgt
      301 ctcggcggaa tctgggagcc tcggacgttc ggatttttgg tgccggaggc gccgctctcg
      361 gccgcaggca aggcgttcgt cgatcgcaat gccgccgcca tgtccgccgg cagcatcatg
      421 catacggctt ggacttcgtg ccggcccggc gcggtgtcca cgatgacgat gccgcgagag
      481 aagatcgtcg tcctgcagtc gccggaggag ctgacgatcc tctacgagat gccccgcatg
      541 gcacgacgcg tgcggatgaa cgccacgcat ccagagaatt tgcaaccaag ctacgtcggt
      601 gactcgatcg gccattggga aggcaacacg ctcgtgatcg acacggtggg cttcaacggt
      661 tacgccgagc tcgattcacg cgggcagccg acgagcccgg cgttgcatac ggtcgagcgc
      721 ctgacgccgg tggccgatgg cagcggcatc gacatcgaag tgacgatcac cgaccccgag
      781 tactacgacg aacccttcac gatcaagcgt gcatggaaca gaagctctgc cacacacccg
      841 ctcgagtacg actgttcgga gaaccctcgg gctgaggact tcgagaacgc ctactacgtg
      901 cgcgaccgct accggccgac gtgcatgcgc gtgaagggag aaggggcgga actgtcgagg
      961 gtagtgtgcc gtcgtccgga ggaatgatgc cgcgcagcgc gagcggaccg gctcgcgctg
     1021 cgctccgcac cttccacccg tcacacggtc cacaatccta acgatccccg ggtcgttcaa
     1081 aatagcagcc cgcatgccgt aatgaccgac tcgggagcgc gcaatgcaac aggccaacat
     1141 cctcgtcatc ggcgccggca tcggcggtct caccgcggcc atcgcactcg gccggcgcgg
     1201 ttttcgcgtg gaactgatcg aacgcgatcc cggttggagc gtgtacggcg tcggcatcat
     1261 ccagcaatcg aacgtgattc gcgccatgca cgtgctcggc atcctgcagg actatctcga
     1321 cgccggcgtc ggattcgacc acgtcgacat cttcgcgccg gacggccgcc ggttggcgcg
     1381 agtaccttcg ccgaagctcg tgccggagca tccggcgaat gtcggtatcg gccgccgcgc
     1441 gctacagggt gttctggcac gacgtgcgcg cgaggccggt gccgagctgc gactcggcat
     1501 cgaggccacg cggctcgacg atgacggcaa cggtgtcggc gtgcagtttt cggatggcag
     1561 cactgcgcgc tacgacctcg tcatcggcgc cgacgggctc tattcgacga cgcgcggcat
     1621 gctgttcccc gacgcgccgc aacctgagct cacggggcag ggcgtgtggc gctacaactt
     1681 cccgcgcgag ccggggctcg acgctctcgc ggcctacgaa ggtcctatcg gcatggggct
     1741 ggtgccgctc agcaaggagc tcatgtacct gtacgtcacc tcgcccgagc ccggcaaccc
     1801 gcgctatccg cgtgagggtt tggcgcgggc gatgcgcgac aagctgaaga atgcgccgcc
     1861 aagaatcgcc gcactggccg ccggcatcac cgacgatgcg ggcgtggtgt acaagccgct
     1921 cgagtggctc tatctcgacg ggccctggca caaggggcgc gtggtgctgc tcggcgatgc
     1981 cgtgcatgcc acgacgccgc atctcgggca gggcgccggc atggcgatcg aggatggtat
     2041 cgtgctggcc gaggagctcg cgcagcaaac tacgccgcaa gccgcgttca ccgcttggca
     2101 ggcgcgccgc gtcgagcgct gccgctacat cgtcgaacag tccaagctca tcggcgacag
     2161 ccaactgggc ttgagtccgc cggtggacca gagcgccgcg g
//
LOCUS       DATCUD010000733         1892 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_85189, whole genome shotgun sequence.
ACCESSION   DATCUD010000733 DATCUD010000000
VERSION     DATCUD010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85189"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..207
                     /locus_tag="VIQ99_10665"
     CDS             <1..207
                     /locus_tag="VIQ99_10665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183654.1"
                     /translation="PQHDIAKLSACPRGTIAVAIDPKTMQDTVVVQTPATQSFSNATM
                     ILPVGREAWIGSFSGDRISRTPLR"
     gene            330..845
                     /locus_tag="VIQ99_10670"
     CDS             330..845
                     /locus_tag="VIQ99_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183655.1"
                     /translation="MQRARPVDLGCLLLTLAAAVALPAAQAQAPASGGSAGCIPRASR
                     AAPSCEPTQTVIELETKIDITLELPDAKLLQCAAAIEIEYWQRDTVVGVAATVDTKDC
                     AASSGEYTVAVIVRDEELELTTLQFSETWQRLDAQPVTFEKDYPIGADVDLVRVRARP
                     VRCTCAEVPQP"
     gene            complement(863..1135)
                     /locus_tag="VIQ99_10675"
     CDS             complement(863..1135)
                     /locus_tag="VIQ99_10675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183656.1"
                     /translation="MSNFKSQAKRKRELAKLDKRQAKEQKRALRKAERSGTEVGAQAP
                     AIAAVAQPMPANHRPAANAAPSRKPLTLAEAVERWRNTKVAKPKKR"
     gene            1368..1625
                     /locus_tag="VIQ99_10680"
     CDS             1368..1625
                     /locus_tag="VIQ99_10680"
                     /inference="COORDINATES: protein motif:HMM:NF012305.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY9183657.1"
                     /translation="MGTRLYVSNLPLSVTEQGLTTRFRKFGVVLSVAFDAAVRANRRG
                     AFVEMGTSAAARSAIAGLNLSDFDGCLVSVYHALASAPSKS"
BASE COUNT          332 a          582 c          637 g          341 t
ORIGIN      
        1 ccgcagcacg acatcgcgaa gctgtcggcg tgcccgcgcg gcacgatcgc ggttgcgatc
       61 gatcccaaga cgatgcagga caccgtcgtc gtgcagacgc ccgccacgca gagcttcagc
      121 aatgcgacaa tgatcttgcc ggtcggccgc gaggcgtgga tcgggtcgtt ctcgggcgat
      181 cggatctcgc gcacgccgct gcgctgaggt gtccgcttac ggattactgc gggtcgagca
      241 acgactgtca gttcgtgagc agagatgaaa ttttccatcg ccccctcttt gggtgccgct
      301 cgcgaaacgc gcaggccggg agaagccagg tgcaaagagc cagacccgtc gatctcggct
      361 gcctgctact gacgctggcg gcggcggtcg cacttccggc tgcgcaggct caagctccgg
      421 ccagtggtgg cagcgcgggc tgtattcctc gtgcttcgcg cgccgctccg agctgtgagc
      481 cgacgcagac cgtcatcgag ctagagacga agatcgacat cacgctggag ttgccggatg
      541 cgaagctgct gcagtgtgcc gcggcgatcg agatcgagta ttggcaacgc gatacggtcg
      601 tcggcgtcgc ggcgacagtc gacacgaagg actgcgcagc atcgagtggc gagtacacag
      661 tcgcggtgat cgtgcgcgat gaagagctcg agcttacgac gctccagttc tctgaaacgt
      721 ggcagcgcct cgacgcgcag cccgtgacgt tcgagaagga ctacccgatc ggcgccgacg
      781 tcgacctcgt gcgcgtgcgc gcgcgtcccg tgcgttgcac gtgcgccgag gtgccgcagc
      841 cgtaagtgtg tgccgcggcc ggtcagcgct ttttcggctt tgcgaccttc gtgttccgcc
      901 atcgctccac cgcctcggcg agcgtcaacg gcttgcgcga gggagccgcg tttgccgcag
      961 gccggtggtt ggcgggcatt ggctgcgcga ccgctgcgat cgcaggcgcc tgagcgccga
     1021 cctccgttcc cgatcgctcg gccttgcgca gagcgcgttt ctgctccttg gcttggcgtt
     1081 tatcgagctt cgcaagctcg cgtttgcgct tcgcctgcga cttgaagtta gacatgcgtt
     1141 tctcccaatg ggcaaaaccc tacggaggcg acgtagacgc cgcggaggat gaaggcaccg
     1201 tgcccgcaga ctcgcgagaa gcgatagggt ttccgaacta tacgcgctat cgtcctcagg
     1261 cgttgacctg tttcgcgagt cgccgaaagc gccatgcccc gttggcaact cgtgtaaact
     1321 acaggaagcc agacttcgct ggcgcttccc caccacagga cgcacgtatg ggcacacggc
     1381 tctacgtgag caacttgccg ctgtccgtga cagagcaagg gctcaccact cgattccgca
     1441 aatttggcgt cgttctgtcc gtcgctttcg acgcggccgt gcgagccaat cggcggggag
     1501 cattcgtcga gatggggacg agcgcggcag cgcgcagcgc aatcgccggg ctcaatctct
     1561 ccgatttcga cggttgcttg gtgtcggtct atcacgcgct cgcgagcgcg ccgagcaagt
     1621 catgacgacg agtagtaccg ccgccgggcg cgacgagagt gcggacgcag aatgctatcg
     1681 actgatctcg atcgatggcg tgggagcgcc cgaaggctgc atgggtagcg attggcacat
     1741 ctatcgaatc gcccagggcg agaacgaaat caccgggtat cggtgcggcg atgtcgcgcg
     1801 ggtaagagcg gaagtggaga cgatcgtgag cgcgctcaac ggcaggcggc agtgggcgaa
     1861 gagcaaggcg tcttcgaaaa ctgagcgccg tg
//
LOCUS       DATCUD010000734         2580 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_106143, whole genome shotgun sequence.
ACCESSION   DATCUD010000734 DATCUD010000000
VERSION     DATCUD010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106143"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1571
                     /locus_tag="VIQ99_10685"
     CDS             <1..1571
                     /locus_tag="VIQ99_10685"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017891690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY9183658.1"
                     /translation="GSDAATKAAIAAVAERYGATVLTLERNGGKGHAVMAGMRRAAKQ
                     GFTHVLQVDADGQHDLDDLPKLLAAAKHDPTALICGAPRFDTSVPKSRLYGRKLTAFW
                     VAVETLSLHTPDTMCGFRVYPLAACIPLLDSVALGRRMDFDIEIAVRLAWRNVPLIPV
                     PTAVIYPEGGTSNFRMVADNALITRLHTKLVLGMLMRLPMLVGRRIGRGLHWSELGER
                     GGVLGMRVLFGTYRVLGRPAFSALLYPVAAYFWVAVGHARRASRDYLQAVRARLVELD
                     RPIPPRLDPFHHVLAFGHGVLDKVAMWADALPEDAIAFEDSALLERFRARDGNRGVLF
                     IGSHLGNLEALRAFGDKVQGMKVNALVFTRHSPKFNRVMAAVSPKTFEKMIQVDSLGP
                     ETVIALRDRLAAGEHVAIVADRVSVRHKERSIAAPFLGRPAPFPEGPFVLASLLECPV
                     YLLFCLKIEGRYRVYFELFAEPFELPRADRQRALEAAITRYAQRLEAHCLLAPTQWFN
                     FFDFWEQAGGNRAA"
     gene            1573..2037
                     /locus_tag="VIQ99_10690"
     CDS             1573..2037
                     /locus_tag="VIQ99_10690"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011715565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEY9183659.1"
                     /translation="MLAVGVAVLTSEIEVEVPFHDADPMGVTWHGNYLRYLELARSAL
                     LNELGYNVRQMTASGYAWPIVDARVKYVKTTTFGQRLRVRATLEEYENRLKIEYSITD
                     SQSGEIVTKATTTQVAVDQQRGEMCFVSPQVLLDKVRAALSARSAASGRKTS"
     gene            2034..>2580
                     /locus_tag="VIQ99_10695"
     CDS             2034..>2580
                     /locus_tag="VIQ99_10695"
                     /inference="COORDINATES: protein motif:HMM:NF012337.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY9183660.1"
                     /translation="MTLYLNDIGVLCPLGAGQDEVLAGLLAADDSGMAPYDGLATGRK
                     TLVGRVRAELPAPPPELADLDCRNNRLLAHALDQIADAVATWRETVGGSRVAVVLGTS
                     TSGIGAGEAAIEALARAGRMPSGYHYRQQEIGTAAEFAARYLKLTGLRYTISTACSSS
                     AKAFASAWRLLEAGRCDAAVVG"
BASE COUNT          392 a          812 c          901 g          475 t
ORIGIN      
        1 atggcagcga tgcggcgacc aaggccgcga tcgcagcggt cgccgagcgc tacggcgcga
       61 cggtgctgac gctcgaacgc aatggcggca agggtcacgc ggtcatggcc ggcatgcgtc
      121 gggccgcgaa acaagggttc actcacgtgc tgcaagtcga tgccgacggt cagcacgatc
      181 tcgacgatct gccgaagctc ttggccgccg cgaaacacga tcccacggcg ttgatctgcg
      241 gtgcgccgcg tttcgacacc tccgtgccga agagccgctt gtacgggcgc aagctgaccg
      301 cgttctgggt cgcggtcgag acactgtcgc tgcacacacc ggacacgatg tgcggctttc
      361 gagtgtatcc gcttgccgct tgcatcccgc tgctcgactc ggtcgcgctg ggccgccgca
      421 tggacttcga catcgagatc gccgtgcgcc tcgcgtggcg caacgtgccc ctgatcccgg
      481 tgccgaccgc cgtgatctat ccggaaggag ggacgtcgaa ctttcggatg gtcgccgaca
      541 acgcgttgat cacgaggctg cacacgaagc tcgtgctcgg gatgttgatg cgtttgccga
      601 tgctggtcgg ccggcgaatc ggtcgaggct tgcattggtc cgagctcggc gagcgcggcg
      661 gtgtgctcgg tatgcgggtc ttgttcggca cgtatcgagt gttgggccgt cccgcgttca
      721 gcgcgcttct gtatcccgtg gccgcgtatt tctgggtggc cgtggggcat gcgcgccggg
      781 cgtcgcgcga ctacctgcaa gcggtgcggg cgcggctcgt cgagctcgat cgtccgatcc
      841 cgccgcgatt ggacccgttt caccacgtgc tcgcgttcgg ccacggcgtg ctcgacaagg
      901 tcgcgatgtg ggccgacgcg ctgcccgagg atgcgatcgc attcgaggac agtgcgctgc
      961 tcgagcgctt tcgtgcccgt gacggtaatc gcggcgtgct gttcatcggc tcgcatctcg
     1021 gcaatctcga agcgctgcgt gcattcggcg acaaggtgca gggaatgaaa gtcaacgcgc
     1081 tcgtgttcac gcgccactcg ccgaaattca atcgcgtgat ggccgccgtg agcccgaaga
     1141 cattcgagaa gatgatccag gtcgattcgc tcggcccgga aaccgtgatc gctctgcgcg
     1201 accgcctggc ggctggcgag catgtcgcaa tcgtcgcgga tcgagtgtcc gtgcgtcaca
     1261 aggagcgttc gatcgccgcg ccgtttctcg gccgcccggc gccgtttccg gaggggccgt
     1321 tcgtgctcgc gagcttgctc gagtgtcccg tctacctgtt gttctgtctt aagatcgagg
     1381 gccgctaccg cgtttacttc gagctgttcg cagaaccgtt cgagctgccg cgcgcggacc
     1441 gccagcgcgc cctcgaggcg gccatcacgc gttatgcgca gcggctcgaa gcgcattgct
     1501 tgctggcccc tacgcaatgg tttaattttt tcgacttctg ggagcaggcc ggcggcaacc
     1561 gagcggcgta acatgctcgc cgtgggggtc gcagtgctta cttcggagat cgaggtcgag
     1621 gtgccgtttc acgacgccga ccccatgggg gtcacgtggc acgggaacta ccttcgctat
     1681 ctcgagctgg cgcgctcggc gttgctgaat gagctcggct acaacgtccg gcagatgacg
     1741 gcgtccggct acgcgtggcc gatcgtcgac gcccgcgtga agtacgtgaa gactacgacg
     1801 ttcgggcaac ggcttcgggt ccgtgcgacg ctcgaggaat acgagaatcg gctgaagatc
     1861 gagtattcga tcacggacag ccaatcgggg gagatcgtga ccaaggcgac gaccacacag
     1921 gtggccgtgg atcagcagcg cggggagatg tgcttcgtct ctccccaggt tctgctcgac
     1981 aaagtgcggg cagccctctc ggcccggagc gcggcgagcg gtcgcaagac ttcgtgacgc
     2041 tgtatctgaa cgacatcggc gtgctctgtc ccctcggcgc cggacaggac gaggtgctcg
     2101 cggggttgct cgcggcggac gactccggaa tggcgccgta cgacgggctc gcgaccggcc
     2161 gcaagacgct ggtcgggcgg gtccgcgcgg agctgccggc gccgccgccc gagctcgccg
     2221 acctcgattg ccgtaacaat cgcttgctcg cacacgcgct cgatcagatt gcggatgcgg
     2281 tcgccacttg gcgcgaaacc gtgggcgggt cgcgggtcgc cgtcgtcctc gggacgagca
     2341 cgtcgggaat cggggccggg gaggccgcga tcgaggcgct agcacgcgcc ggccggatgc
     2401 cgagcggtta tcactatcgg cagcaggaga tcggcacggc cgcggagttc gcggcgcggt
     2461 atctgaagct gaccggcttg cgctacacga tctcgacggc gtgctcgtcg tcggccaagg
     2521 cattcgcgtc ggcgtggcgg ttgctcgaag cgggtcgctg cgatgctgcc gtcgtcggcg
//
LOCUS       DATCUD010000735         1686 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49622, whole genome shotgun sequence.
ACCESSION   DATCUD010000735 DATCUD010000000
VERSION     DATCUD010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1686
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49622"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..589)
                     /locus_tag="VIQ99_10700"
     CDS             complement(<1..589)
                     /locus_tag="VIQ99_10700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183661.1"
                     /translation="MIGTSRTAFATLLAATVLLAGRSSAQPPAAPPTPPANPRQAAPI
                     DLTGQWVAIVNEDWRWRMVTPPKGDYASVPLNDEGRRVADQWDPARDGACEAYGAAAL
                     LRMPTRLRIRWDGDERLVVETDAGRQLRNLDFGASASSAAAPSLQGQSIAKWVTPPRP
                     GGGPGLAGAGGGAARAGGYLDVRTTSLTGGWLRRNG"
     gene            complement(586..1443)
                     /locus_tag="VIQ99_10705"
     CDS             complement(586..1443)
                     /locus_tag="VIQ99_10705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183662.1"
                     /translation="MNPASGPPPVVRAIAALLGAWLACVGTAVTAQTNLVGYWNPLFH
                     EDVDERIPGPSIGDYAGLPITDAARLRAEAWDASLLSMPEHQCKPHPSTYGFRGVGVL
                     RIWEDRDEDTQQLVKIHTHIAWQEQHREIWMDGRPHPPEYAPHTWQGFSTGSWDGDVL
                     VVRTTHLKAGWMRRNGLPLSDRATMTDRFHRYGDIMTHVMIVEDPVYLTEPLVKTNGF
                     LLQLAGSMTPYPCEPVVEVVRDPGFVPHYLPGQNPFIAEFGEAHGLPREATRGGAATA
                     LPEFAETLR"
     gene            complement(1460..>1686)
                     /locus_tag="VIQ99_10710"
     CDS             complement(1460..>1686)
                     /locus_tag="VIQ99_10710"
                     /inference="COORDINATES: protein motif:HMM:NF019886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HEY9183663.1"
                     /translation="AEQLIDAERGCGIVEGALRDLPARSRQAFVLYVHEQMTYERIAL
                     ALGVSKKTIERDIALTIALCRSRLAHWNET"
BASE COUNT          269 a          577 c          549 g          291 t
ORIGIN      
        1 cgccgttacg gcgcaaccag ccgcccgtca agctcgtcgt cctgacgtcg agatacccgc
       61 ccgcgcgagc cgctccgccg ccggcccccg cgagaccggg cccgcctccg ggccgcggtg
      121 gcgtcaccca tttggcgatc gattgtccct gcagcgacgg cgccgcggcc gatgatgccg
      181 acgcgccgaa atcgagattg cggagctgcc ggccggcgtc ggtctcgacg accaaccgct
      241 cgtcgccgtc ccaccgaatg cgcaagcgcg tcggcatgcg caacaacgca gcggcgccgt
      301 acgcctcgca cgcgccgtct cgcgcaggat cccactgatc cgcgacgcgc cgcccttcgt
      361 cgttgagcgg cacgctcgca taatcgccct tcggcggcgt gaccatgcgc cagcgccagt
      421 cctcgttgac gatcgcgacc cattgacccg tgagatcgat gggtgcagcc tgccgcggat
      481 tcgcaggcgg tgtcggcggt gccgcggggg gttgtgcgct actgcggccg gccagcaaca
      541 ccgtggcggc gagcagcgtg gcgaacgcgg tgcgagaagt gccgatcatc gcagtgtctc
      601 cgcgaattcc ggaagcgcgg tcgcggcgcc gccgcgcgtc gcttcgcgcg gcaggccatg
      661 cgcctcgccg aactccgcga tgaacgggtt ctggccgggc aggtagtgcg gcacgaagcc
      721 gggatcgcgc acgacttcca ccacaggttc gcaggggtac ggtgtcatcg agcctgcgag
      781 ctgcaacaag aagccgttcg tcttgacgag cggctccgtc aagtacactg gatcctccac
      841 gatcatcacg tgcgtcatga tgtcgccata gcggtgaaat cggtcggtca ttgtcgcgcg
      901 gtcgctgagc ggcagaccgt tgcggcgcat ccaaccggct ttcaggtgcg tcgttcggac
      961 gacgagcacg tcgccgtccc agcttcccgt cgagaagccc tgccacgtgt gaggtgcgta
     1021 ctcgggcggg tgcggccgac cgtccatcca aatctcgcga tgttgttcct gccacgcgat
     1081 gtgcgtgtga atcttcacga gttgctgtgt gtcctcgtcg cggtcctccc agatacgcag
     1141 gacgccgacg ccgcgaaagc cgtaggtcga cgggtgcggc ttgcactgat gctccggcat
     1201 cgagagcagg gacgcgtccc acgcctcggc gcgtaagcgc gcggcgtcgg tgatcggcag
     1261 acccgcgtag tcgccgatcg acgggccagg aatgcgctca tcgacgtcct catggaataa
     1321 cggattccag taaccgacca gattggtttg tgcggtgacg gccgtgccaa cgcacgcaag
     1381 ccacgcgcca aggagtgccg cgatggcccg gaccacgggc ggcggccccg atgctggatt
     1441 cattgtttca ctaattcctt caggtctcgt tccagtgtgc cagcctcgac cggcacaacg
     1501 cgatcgtcaa ggcgatatcg cgctcgatcg tctttttgct gacgccgagc gcgagtgcga
     1561 tgcgctcgta tgtcatttgc tcgtgtacat acagtacgaa tgcctggcgc gaccgtgccg
     1621 gcaagtcgcg caacgcaccc tcgacaattc cgcagccgcg ttcggcatcg atcagctgtt
     1681 ccgcct
//
LOCUS       DATCUD010000736         1730 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_35453, whole genome shotgun sequence.
ACCESSION   DATCUD010000736 DATCUD010000000
VERSION     DATCUD010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1730
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_35453"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(156..1118)
                     /locus_tag="VIQ99_10715"
     CDS             complement(156..1118)
                     /locus_tag="VIQ99_10715"
                     /inference="COORDINATES: protein motif:HMM:NF025679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4382 domain-containing protein"
                     /protein_id="HEY9183664.1"
                     /translation="MDHTKLFGRTACALAVTALVGCSGGSSDDPAPQDARISVSLMDA
                     PVDGVTAVYVKITSMWIKPQGGPAVQLPLTTTPMTVNLMALTDTNAAILVDEAVIEPG
                     TYEWLSMDIAAERNVRDSYVLTETGGEEEIDLRVPSGRLRLVGGFDVESNEAVRLLFD
                     WDMRQGLVFPPGQGRYFLKPAFRMIDVTSYGRLEGTIAAALVGTNLDPAANNCATDDN
                     VDLDEGNVVYVYSGAPTPPLDDIDGTDDPVATIEATRNSVGDYVYRTLIAPGTYTVVF
                     TCEAGNDDPEAVDDVITFHNPINTTNPVTNTGGTTTVNFGPTTS"
     gene            1319..>1730
                     /locus_tag="VIQ99_10720"
     CDS             1319..>1730
                     /locus_tag="VIQ99_10720"
                     /inference="COORDINATES: protein motif:HMM:TIGR02937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor"
                     /protein_id="HEY9183665.1"
                     /translation="MGKPTVDPGGESEQDRFARLIRQHYPALYRAAYGLTRSAADAED
                     LVQEVCVRAYPRLGEVEQLEQPRGWLLRVLYRLFIDQRRRYERKHVRAIDEDEEFVSD
                     EPSPAEEVDRALYRWRIEDAWRHLSQEQRLLLALH"
BASE COUNT          300 a          529 c          581 g          320 t
ORIGIN      
        1 aggagcgtac gcccgtggtg cggggacgcc tgagagcttg gtctcactgc tcccgcggcg
       61 aagtagacgc agttcactgg cctggcgtcg gcgcgagcga ggcgacgcca aggcgtgttc
      121 aaggtgccgt gtccggcgcc agacttggct cctcgctatg aggtcgttgg gccgaagttc
      181 accgtcgtcg tgccgccggt attcgtgacc ggattcgtcg tgttgatagg gttgtggaag
      241 gtgatcacgt cgtccaccgc ctcggggtcg tcgttgccgg cttcgcaggt aaatacgacc
      301 gtgtacgtgc ccggcgcgat caacgttcga taaacgtagt ctccgaccga gttccgcgtc
      361 gcttcgatcg tcgccacagg gtcgtccgtg ccgtcgatgt cgtccaacgg cggtgtcggg
      421 gcgcccgagt acacgtagac gacgttgccc tcgtcgagat cgacgttgtc atccgtggcg
      481 cagttgttcg cggccgggtc gaggttcgtg ccgaccaacg cagcggcaat cgtgccctcg
      541 agcctgccgt aggacgtgac gtcgatcatt cgaaacgcgg gcttcaagaa atagcggcct
      601 tggcccggcg ggaagacgag gccctggcgc atatcccaat cgaacagcag gcgaacggcc
      661 tcgttcgatt ccacgtcgaa accgcccacg agtcgcagcc gcccgctcgg cacgcggagg
      721 tcgatttctt cctcgccgcc agtttccgtc agtacatacg aatcgcgcac gttgcgctcg
      781 gcggcaatat ccatcgaaag ccactcgtaa gtgccgggct cgatgacggc ctcgtccacg
      841 aggatcgcgg cattcgtgtc cgtcaacgcc atcaggttca cggtcatcgg agtggttgtg
      901 agcggcaact gcactgcagg gccgccctgt ggcttgatcc acatcgacgt gatcttcacg
      961 tagaccgccg tgacgccgtc gaccggagcg tccatcagcg acacgctgat cctggcgtct
     1021 tgcggtgcag ggtcgtcgct gctgccgccc gaacaaccca cgagggccgt gaccgcaagc
     1081 gcgcaagccg ttcggccgaa tagtttcgta tggtccatcc ttgcatcccc cgcgctccag
     1141 gcgcgcaaaa agctccacga cagccttaca cgcgccgacg ctgcatgacg ttccggtgaa
     1201 ttgacataat cacgcttcga gaggcggtgg cgcggcgtcg cgcacactcc ggcggaaccg
     1261 aaccggccgt gatccgtgtt agtgagttag gcccgagggg gcatgggaca gtgactgcat
     1321 gggaaaacca accgtcgacc ccggcggtga gtcggagcaa gaccggttcg cgaggctgat
     1381 tcggcaacac tacccagcgc tgtaccgggc cgcctacgga ctgacgcggt ctgccgccga
     1441 tgccgaggac ctggttcagg aagtgtgtgt gcgggcgtac ccgcgcctcg gagaggtcga
     1501 gcagctggag cagccgcgcg gctggttgtt gcgggtgttg tatcgattgt tcatcgatca
     1561 gcgccggcgg tacgagcgca agcacgtgcg ggcgatcgac gaggacgagg agttcgtgag
     1621 cgatgagccg agtccggcgg aagaggtgga tcgcgcgctc tatcgctggc gaatcgagga
     1681 tgcatggcgg cacttgagcc aggaacagcg tttgttgttg gcgctgcacg
//
LOCUS       DATCUD010000737         3339 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_106164, whole genome shotgun sequence.
ACCESSION   DATCUD010000737 DATCUD010000000
VERSION     DATCUD010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106164"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VIQ99_10725"
     CDS             <1..286
                     /locus_tag="VIQ99_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018231023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA recombination/repair protein RecA"
                     /protein_id="HEY9183666.1"
                     /translation="AEFEILYGVGISREGEIVDLGVKQNIIEKSGAWYSFNGERIGQG
                     KENARDFLLEHKDVAAAIEKRIRAELLPAKKGPVEVPAEAVEEEGAALQA"
     gene            267..752
                     /locus_tag="VIQ99_10730"
     CDS             267..752
                     /locus_tag="VIQ99_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008933041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein RecX"
                     /protein_id="HEY9183667.1"
                     /translation="MRRSKPDASGELDAEACTRTALDLLARREHSRRELTRKLGARGF
                     PDDVVAPALDGLERSGALAEARFTESFVRSRVAKGQGPARIRAELAQRGVADEDAEDA
                     LREAQVDWLETIRAVRRKRFGPELPRDYRERARQARFLEYRGFGGAEIRAALELDGDS
                     D"
     gene            782..>3339
                     /gene="alaS"
                     /locus_tag="VIQ99_10735"
     CDS             782..>3339
                     /gene="alaS"
                     /locus_tag="VIQ99_10735"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011865019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEY9183668.1"
                     /translation="MPLTSSQLRSAFLDFFAKNGHKVVASSSLVPGNDPTLLFTNAGM
                     VQFKDCFLGSDKRDYVRAATSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKKDAIRFAWDFVTDTLKIDPKRLMVTVYATDDEAYDLWHKMIGLPADKIVRIGDNKP
                     DGGSDNFWQMGDTGPCGPCSEIFYDHGPSIAGGPPGSPDADGDRWVEIWNLVFMQFDR
                     SADGKLTPLPKPSVDTGAGLERMAAVMQGVTNNYDIDLFVDLIRDAARLLKTTDLKNP
                     SLRVIADHIRACSFLVVDGVIPSNEGRGYVLRRIARRAMRHGYKFGVNPAFFADLVPT
                     LAKAMGDAYPELRAKQDFVRDVLRKEGEQFARTLSNGMEILDAAIAKLGKAKVIDGNT
                     VFKLHDTYGFPTDLTADIARERGYTVDMEAYERAMDVQRKQSQAASQFGVDVSAGVKL
                     DDKTEFLGYETLTSDAPVVALFDEAGQRVQALEKGAKGTVVLERTPFYAESGGQVGDT
                     GELAAGAARFAVGDTQKHGSAFGHRGTVTAGRIAVGDRVRANVDERRRAAIVLNHSAT
                     HLLHAALRKVLGAHVQQKGSLVEAERLRFDFSHYEPVTATQLKEIEALVNEQIRLNHA
                     ADIRVLPYDEAIAAGALAFFGDKYGDKVRVLKLGDFSTELCGGTHVRRSGDIGLFKVT
                     SESGIAAGVRRIEAVTGQGALDLVNANEAVLREVAGLVKASREDVSAKVEQLVDRARA
                     LERELASLRQKLASGGSRDILKEAQVVNGIKVLAARLDGADAKVLRDTADQLKDKLGS
                     GVVVLGAVEGDKVFLVASVSKDLAGKLKAGDIIKPVAELCGGRGGGRADFAQAGG"
BASE COUNT          586 a         1077 c         1156 g          520 t
ORIGIN      
        1 ggccgagttc gagatcctct atggcgtcgg catctcgcgc gaaggcgaga tcgtggatct
       61 cggcgtcaag cagaatatca tcgagaagtc gggtgcttgg tacagcttca acggcgagcg
      121 tatcggccaa ggcaaagaga acgcacgcga tttcttgctc gagcacaaag acgttgccgc
      181 cgcgatcgag aagcgcatcc gcgccgagct cttgccggcg aagaaggggc ccgtcgaggt
      241 ccccgcggag gctgttgagg aggagggtgc ggcgctccaa gcctgacgcc tccggcgagc
      301 tcgacgccga agcctgcacg cgcacggcgc tcgacctcct ggcgcggcgt gagcacagcc
      361 gccgcgagct cactcgtaag ctcggcgcgc gcggctttcc ggacgacgtg gtcgcgcccg
      421 cgctcgatgg cctcgagcgc tccggtgctt tggccgaagc gcgtttcacg gagagcttcg
      481 tgcgctcgcg cgtcgcgaaa gggcaaggcc ccgcgcggat tcgcgccgag ctcgcgcagc
      541 gcggtgtcgc ggacgaggac gccgaagacg ccttgcgcga ggcccaagtc gattggctcg
      601 agacgattcg cgccgtgcgc cgcaagcggt tcgggcccga gctaccgcgc gattaccgcg
      661 aacgcgcgcg tcaggcacgg ttcctcgagt accggggctt cggcggcgcc gagatccgtg
      721 ccgcactgga actcgacggc gattccgatt agcgtgcaca tcctttaatc gagcgttatc
      781 gatgcctctc acgagcagcc aattgcgttc cgcgttcctc gacttcttcg cgaagaacgg
      841 tcacaaggtc gtggcgagct cgtcgctcgt gcctggcaac gatccgacgc tgctgttcac
      901 gaacgccggc atggtgcagt tcaaggactg cttcttgggc tcggacaagc gcgactacgt
      961 gcgcgcggca acgagccagc gctgcgtgcg ggcgggcggc aagcacaacg acctcgagaa
     1021 cgtcggctac acggcacgcc atcacacgtt cttcgagatg ctcggtaact tcagcttcgg
     1081 cgactacttc aagaaggacg cgatccgctt cgcctgggac ttcgtgacgg acacgctgaa
     1141 gatcgacccg aagcgactga tggtcacggt ctatgccacc gacgacgagg cgtacgacct
     1201 gtggcacaag atgatcgggc tgcccgccga caagatcgtg cggatcggcg acaacaagcc
     1261 ggacggcggc tccgacaact tctggcagat gggcgacacg ggcccgtgcg gcccgtgcag
     1321 cgagatcttc tacgatcacg gcccgagcat cgcgggtggc ccgccgggct cgcccgatgc
     1381 cgacggcgat cggtgggtcg agatctggaa cctcgtgttc atgcaattcg atcgttccgc
     1441 ggacggcaag ctgacgccgt tgccgaagcc gtcggtcgac actggcgcgg gcctcgagcg
     1501 catggccgcc gtcatgcagg gcgtcacgaa caactacgac atcgatttat tcgtcgacct
     1561 gattcgcgac gccgcgcggc tgctgaagac cacggacctc aagaatccgt cgctgcgcgt
     1621 gatcgcggat cacattcgcg cgtgcagctt cctcgtcgtc gacggcgtga tcccgtcgaa
     1681 cgagggtcgc ggctacgtgc tgcgccggat cgcgcggcgc gcgatgcgcc acggttacaa
     1741 gttcggcgtg aaccccgcgt ttttcgcgga cctcgtgccc acgctcgcga aggcgatggg
     1801 cgatgcgtac ccggaactgc gcgcgaagca ggacttcgtg cgcgacgtcc tgcgcaagga
     1861 aggcgagcag ttcgcgcgca cgctgtcgaa cggcatggag atcctcgacg cggccatcgc
     1921 gaagctcggc aaggcgaagg tcatcgacgg caacacggtc ttcaagctcc acgacaccta
     1981 cggttttccg acggacctca cggccgacat cgcgcgcgaa aggggctaca ccgtcgacat
     2041 ggaggcctac gagcgcgcga tggacgtgca gcgcaagcag tcgcaggccg cgagccaatt
     2101 cggcgtggac gtctcggccg gcgtgaagct cgacgacaag accgagttct tgggctacga
     2161 gacgctcacg agtgacgcgc cggtcgtcgc gttgttcgac gaggcgggtc aacgcgtgca
     2221 agcgctcgag aaaggcgcga agggcaccgt cgtgctcgag cgcacgccgt tctacgccga
     2281 gagcggcggc caggtcggcg ataccggcga gctcgccgcc ggtgccgcgc gcttcgcggt
     2341 cggcgacacg cagaagcacg ggtccgcgtt cggccatcga ggaacggtta ccgcgggccg
     2401 cattgccgtt ggcgaccgcg tgagagcgaa tgtcgacgag cggcgccgcg ccgcgatcgt
     2461 gctgaatcat tcggcgacac acttgttgca cgccgcgctg cgcaaagtcc tgggcgcgca
     2521 cgtgcagcag aagggctcgc tcgtcgaagc cgagcgcctg cgcttcgatt tctcgcacta
     2581 cgagcccgtc actgcgacgc agctcaaaga gatcgaggcg ctggtcaatg agcaaattcg
     2641 tttgaaccac gcggccgaca tccgtgtgtt gccgtacgac gaggcgatcg cggccggtgc
     2701 gctcgcgttt ttcggcgaca aatacggcga caaggttcgc gtgctgaagc tcggcgattt
     2761 ctcgacggag ctgtgcggcg gcacgcacgt gcgccgctcc ggcgacatcg gcttgttcaa
     2821 ggtcacgtcc gagagcggta tcgcagccgg cgtgcgccgc atcgaggccg tcacgggcca
     2881 gggcgcgctc gacctcgtga atgcgaacga agccgtgctg cgcgaggttg cggggctcgt
     2941 caaggcgagc cgcgaggacg tctctgccaa ggtcgagcaa ctcgtcgatc gcgcacgcgc
     3001 gctcgagcgc gagctcgcgt cgctgcggca gaagctcgcg agcggcggca gccgcgacat
     3061 cctgaaggaa gcccaggtcg tgaacggcat caaggtgctg gcggcgcggc tcgacggggc
     3121 cgatgccaag gtgctgcgcg acacggccga ccagctcaag gacaagctcg gctcgggcgt
     3181 ggtcgtgctc ggagccgtcg agggcgacaa agtgttcctc gtcgcgagcg tcagcaagga
     3241 cctcgccggc aagctcaagg ccggcgacat catcaagccg gtggccgagc tctgcggcgg
     3301 ccgcggcggt ggccgtgccg atttcgccca ggcgggggg
//
LOCUS       DATCUD010000738         5049 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_49631, whole genome shotgun sequence.
ACCESSION   DATCUD010000738 DATCUD010000000
VERSION     DATCUD010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 5049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5049
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49631"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2233)
                     /locus_tag="VIQ99_10740"
     CDS             complement(<1..2233)
                     /locus_tag="VIQ99_10740"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013034676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase I"
                     /protein_id="HEY9183669.1"
                     /translation="MGKNLVIVESPAKARTIEKYLGKDFEVLASYGHVRDLVPKEGAV
                     DPEHGFAMKYQLIEKNEKHVDKIVKAAKKATAVYLATDPDREGEAISWHVYEVLKERK
                     VLDSKKVQRVVFYEVTKRAIQEAIEQPRDLSEQLVNAQQARRALDYLVGFNLSPLLWK
                     KVRRGLSAGRVQSPALRLIVEREDEITKFKAQEYWTIEALAEQAEQQFPARLLTFDGA
                     KVEQFTFGDESSVRAAEQKIRDTARGVLTVAKVDKKQRRRNPAAPFTTSTLQQDASRK
                     LGFSAKQTMTVAQRLYEGIDIGEGAVGLISYMRTDSVTLGNDALEELRAVIAERYGAE
                     NLPEEPRRYTTKAKNAQEAHEAIRPTSAARHPEEIRRFLDPNQYKLYELIWKRTIASQ
                     MNPAVYDTVALDLVAGDSPSGDIAFRATGSVLVSPGFIAVYQEGQDDSAADEQDRILP
                     AVAEGDRLRLKDIQSAQHFTEPPPRYSEATLVKALEELGIGRPSTYASIISTLRERQY
                     VEMENRRFTPTDVGRVVNVFLTKYFDDYVSYDFTARMEDSLDAVSRGESEWVPLLDNF
                     WQPFIELVKKIDETVTRGEASQERVLGTDPASGRPIAVRMGRYGAFVQIGTKDDVEKP
                     RFAGLRPGQKMDSITLEAALDLFKLPRELGLTPEGEPVSANIGRFGPYVRYANKFVSI
                     KGDDPYTITLERALQLIAEKKIADANRLIRDFPEHGIQVLNGRYGPYITNKAKNAKIP
                     KDKV"
     gene            complement(2399..2866)
                     /locus_tag="VIQ99_10745"
     CDS             complement(2399..2866)
                     /locus_tag="VIQ99_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HEY9183670.1"
                     /translation="MKESVLDVLMYLFESYVESQDEPEPDRNELKVELGRAGFHDGEI
                     DRALDWLDGLNPADASHVPHNSAFRVFDVAEQERLDAASRGYLLQLEQIGILKPAQRE
                     IVIDRLLALDNEEIDVEQTKWVVMMVLFSQPGQQDAYAQMEDLVYADDSAWVH"
     gene            complement(2866..3990)
                     /gene="dprA"
                     /locus_tag="VIQ99_10750"
     CDS             complement(2866..3990)
                     /gene="dprA"
                     /locus_tag="VIQ99_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020650996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HEY9183671.1"
                     /translation="MANDAWLTLLHAAQQVSARPWLDALRALGSADAVVAESAHALLA
                     RGLSTDAVAKLKAPDAATIERWRAWLDGPQRALVTFGSSGYPPRLAELTDAPLALWIE
                     GKEHSLLSAPQLAIVGSRSPTTTGRETAEQFARYLSQRGLTITSGLATGIDAASHRGS
                     VRELGGTVAVLGNGIDIVFPRGHAQLSAEIAAHGLLVSEYAPGVEPQRYFFPARNRII
                     AGLSYGTLVVEATRRSGSLITAKHAMETGREVFAIPGSIHNPLARGCHWLIRQGAKLV
                     EEAADILVELAPQLRLEGIELSPPPAATEVAVESTYANDPAYRNLLKALDFSPLSIAE
                     LSTRAELTTAELSSMLLILELEGLVEALPGGRYARLGKRK"
     gene            complement(4027..>5049)
                     /locus_tag="VIQ99_10755"
     CDS             complement(4027..>5049)
                     /locus_tag="VIQ99_10755"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEY9183672.1"
                     /translation="QRLEVAAVGQQPATPVLNPSHPDSYVVQTGDTLWDIASMFLRDP
                     WLWPEIWQINPQVENPHLIFPGDTLSLAYLDDGRPVIELERGPVVAGPGGFERLSPRI
                     RSTPLEDAITTIPYDVIAPFLSRPRVIERDQLDDLPYIVAHREGIIGSPGRDVYARGI
                     DQAPVGSVFNIVERGDELVDPDNNDLLGYQGIYVGQGRVDRTGDPATIRVLESEREAV
                     VGNYLMDEEDVNLRDFVPHAPSTEVDGRIISVLSGVSLIGQYHVVVINRGSAAGLEPG
                     HVLRAFQTGRVVEDTQRGAFGRKVRLPDEPAGTMMVFRTSERLSYALVMEVTTPLSLL
                     DTVRNP"
BASE COUNT          830 a         1589 c         1639 g          991 t
ORIGIN      
        1 ggactttgtc cttcgggatc ttcgcgttct tcgccttgtt tgtgatgtac ggtccgtagc
       61 ggccgttcaa cacttgaatg ccgtgctcgg ggaagtcgcg gatcagccta ttcgcgtcgg
      121 cgatcttctt ctcggcaatc agttgcagcg cgcgttcgag cgtgatcgtg tacgggtcgt
      181 cgcccttgat cgagacgaac ttgttcgcat agcgcacgta cgggccgaat cgaccgatgt
      241 tcgcagatac gggctcgcct tcgggcgtca acccaagctc gcgcggcagc ttgaagagat
      301 cgagagcggc ttcgagcgtg atgctgtcca tcttttgccc ggggcgtaag cccgcgaacc
      361 gcggcttctc gacgtcgtct ttcgtgccga tctgcacgaa agccccatat cggcccatgc
      421 gcacggcgat cggccggccg ctcgcgggat cggttccgag cacgcgttct tgcgacgctt
      481 cgccgcgcgt gaccgtttcg tcgatctttt tcacgagctc gatgaacggc tgccagaagt
      541 tgtcgagcag cggcacccac tcactctcgc cgcgcgagac cgcgtcgagc gagtcctcca
      601 tgcgcgcggt gaagtcgtag ctgacgtagt cgtcgaaata cttcgtcagg aacacgttca
      661 cgacgcggcc gacatcggtt ggggtgaacc gtcggttctc catctcgacg tactgacgtt
      721 cgcgcagcgt cgagatgatc gaggcgtacg tggacggccg gccgattccg agctcttcga
      781 gggccttgac gagcgtcgcc tcggaatagc ggggcggcgg ctcggtgaag tgctgcgcgc
      841 tctgaatgtc cttcaggcgg aggcgatcgc cctcggcgac ggccggcaag atccgatcct
      901 gctcatcggc cgcgctgtcg tcttgacctt cctgatacac ggcgatgaat ccggggctca
      961 cgagcaccga gccggtcgcg cgaaacgcga tgtcgccgct cggcgaatcg ccggccacga
     1021 gatcgagtgc aaccgtgtca tacacggccg ggttcatctg cgatgcgatc gtgcgcttcc
     1081 agatcaattc gtagagcttg tactgattcg gatcgaggaa gcgccggatc tcctcgggat
     1141 gacgcgcggc cgatgtcggc ctgatcgctt cgtgcgcttc ctgcgcgttc ttggctttcg
     1201 tcgtgtaacg gcgcggctct tcgggaagat tctctgcgcc ataacgttcg gcgatcaccg
     1261 cgcgcagctc ctcgagagca tcgttgccga gagtcacaga gtccgtgcgc atgtagctga
     1321 tcaagccgac ggcgccctcg ccgatgtcga taccttcgta tagccgctgc gcgacggtca
     1381 tcgtttgctt cgcactgaaa ccgagcttcc tcgacgcgtc ttgctgcaac gtcgacgtcg
     1441 tgaacggtgc ggctgggtta cgcctgcgct gtttcttgtc gaccttggcg accgtgagca
     1501 cgccgcgtgc ggtgtcgcga atcttctgct cggctgcgcg cacgctcgat tcgtcgccga
     1561 acgtgaactg ctctactttg gcgccatcga acgtcagcaa gcgcgcaggg aactgctgct
     1621 cggcctgctc ggcgagagcc tcgatcgtcc aatattcctg cgccttgaac ttcgtgatct
     1681 cgtcttcgcg ttccacgatc agccgcagcg ccgggctttg cacgcgcccg gccgacagac
     1741 cgcgccgtac cttcttccac aacagcggtg acaggttgaa tccgacgagg tagtcgagcg
     1801 cgcggcgcgc ctgctgtgcg ttcacgagct gttccgacag gtcgcggggc tgctcgatcg
     1861 cctcttggat cgcgcgtttc gtgacctcgt agaagacgac gcgctgcacc ttcttcgaat
     1921 cgaggacctt gcgctccttc agcacctcgt agacgtgcca ggagatcgcc tctccctcgc
     1981 ggtccgggtc ggtcgcgaga tagacggccg tggctttctt cgcggccttg acgatcttgt
     2041 cgacgtgctt ctcgttcttc tcgatgagct ggtacttcat cgcgaagccg tgctcgggat
     2101 cgacggcgcc ttccttcggc accaggtccc gcacgtgccc gtaggacgcg agcacctcga
     2161 aatccttgcc gagatacttc tcgatggtgc gtgccttggc aggcgactcg acgatgacga
     2221 gattcttgcc catggcgtca gtggccgcgc gtcgcgtacg tcagtctcgt cggtagaggc
     2281 atggcttgcg agggggtatc gaagtttgaa cgggccagat ttcggggacc ggcaggatag
     2341 ccgattcgca gcgacgcgtt aaagccggcg cgactcggca gtccgggagg tcgcgggatc
     2401 agtgcaccca ggccgagtca tccgcgtaga cgagatcctc catctgcgcg taggcgtcct
     2461 gctgtccagg ctggctgaac aagaccatca tgacgaccca cttggtttgc tcgacatcga
     2521 tctcctcgtt gtcgagcgcg agcagccgat cgatgacgat ctcgcgctgc gcaggcttca
     2581 agatgccgat ctgctcgagt tgcagcagat aaccgcgtga cgccgcgtcg agacgctcct
     2641 gctccgcgac atcgaaaacc ctgaatgcgc tgttgtgtgg cacgtggctg gcgtctgcgg
     2701 ggttgagccc gtcgagccag tcgagcgcgc ggtcgatttc accgtcgtgg aagcctgcac
     2761 gaccgagctc gactttcagc tcgttacggt cgggttccgg ttcgtcttgg gattcgacat
     2821 acgactcgaa caggtacatg agtacgtcga ggacggattc tttcatcatt tcctcttgcc
     2881 caggcgcgcg tagcgaccac cgggcaatgc ctcgaccagc ccttcgagct ccagaatcag
     2941 gagcatggag gaaagctccg ctgtcgtcaa ttcagcgcgc gtgctcagct cggcgatcga
     3001 aagaggcgaa aaatccaatg ctttgagtag gttccggtag gcgggatcgt tcgcgtaagt
     3061 gctctccacc gcaacctcgg tcgcggccgg cggaggcgac agctcgatgc cttcgagcct
     3121 gagctgcggg gcgagctcga cgagtatgtc ggcagcttct tccacgagct tcgcgccctg
     3181 tcggatcagc cagtggcagc cgcgtgcgag tgggttgtga atcgagcccg ggatcgcgaa
     3241 cacttcccgg cccgtctcca tcgcgtgttt ggccgtgatc aacgagccgc tgcgccgcgt
     3301 ggcctcgacc acgagcgtgc cgtacgagag gcccgcgatg atgcggttgc gcgccgggaa
     3361 gaaatacctt tgcggctcga cgccgggagc gtactcggag accaacaatc cgtgcgctgc
     3421 gatctcggcc gacaattgcg cgtgaccgcg cggaaacacg atgtcgatgc cgttgccgag
     3481 cacggcgacg gtgccgccga gctcacgcac cgagccgcga tggctcgcgg cgtcgatgcc
     3541 ggtcgcgagg ccgctcgtga tcgtcagacc acgctggctc aggtagcgcg cgaattgttc
     3601 ggcggtctct ctgccggtcg tggtcgggct acggctgccg acgatcgcga gctgcggagc
     3661 cgaaagtagc gagtgctcct tgccttcgat ccacaacgcg agcggcgcat cggtcagctc
     3721 cgccaagcgc ggtgggtaac cggagctgcc gaaagtcacg agtgcgcgct gcggaccgtc
     3781 gagccaagca cgccagcgct cgatcgtcgc cgcgtctggc gccttgagct tggcgactgc
     3841 atccgtggat agtccgcgag ccagcagcgc gtgcgcggat tccgctacga ccgcgtcggc
     3901 cgagcccaag gctcggagcg cgtcgagcca tggccgagcg gaaacctgct gtgctgcatg
     3961 gagcagcgtc agccaagcgt cgttagccat ggctgcgccg ctcgcggcgc tccgaacggg
     4021 gcggacttaa gggttgcgaa cagtgtccag cagcgagaga ggagtcgtga cctccatgac
     4081 gagcgcatag ctgagccgtt ccgacgtgcg gaacaccatc atcgtgccgg ccggctcgtc
     4141 cggcaatctg actttccggc cgaaagctcc tcgttgagtg tcttcgacga ctctgccggt
     4201 ttggaatgcc cgcagcacgt ggccgggctc gagtcccgca gccgagccac ggttgatcac
     4261 gacgacgtgg tactggccga tcaacgacac gcctgacaag accgagatga ttcggccgtc
     4321 gacctcggtg ctcggcgcat ggggcacgaa gtcgcggagg ttcacgtcct cttcgtccat
     4381 cagatagttg ccgaccactg cttcacgctc gctttcgagc acgcgaatcg tcgccgggtc
     4441 gccggtccga tcgacgcggc cctggccgac gtagatgccc tggtaaccga gcagatcgtt
     4501 gttgtccgga tcgacgagct catcgccgcg ctcgacgatg ttgaagacgg atcccacggg
     4561 ggcttgatcg atgccgcgcg catagacgtc gcggccgggg ctgccgatga tgccttcgcg
     4621 atgcgcgacg atatacggca gatcgtcgag ctgatcgcgc tcgatcacgc gcggccgcga
     4681 gaggaacggc gcgatgacgt cgtacgggat ggtcgtgatc gcatcctcga gcggagtcga
     4741 gcggatccgc ggcgagagtc tttcgaagcc gccggggcct gcgaccacag ggccgcgctc
     4801 gagctcgatc acggggcggc cgtcgtcgag atacgccagc gacaaggtgt cgccggggaa
     4861 gatcagatgc gggttctcga cctgcgggtt gatctgccag atctccggcc acaaccacgg
     4921 gtcgcgcagg aacatcgacg cgatgtccca cagcgtgtct ccggtctgta cgacgtagct
     4981 atcggggtga ctcggattca ggaccggcgt ggcgggttgc tgtccgacgg ctgcgacctc
     5041 gagccgctg
//
LOCUS       DATCUD010000739         2131 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63503, whole genome shotgun sequence.
ACCESSION   DATCUD010000739 DATCUD010000000
VERSION     DATCUD010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63503"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1405
                     /gene="groL"
                     /locus_tag="VIQ99_10760"
     CDS             <1..1405
                     /gene="groL"
                     /locus_tag="VIQ99_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087406.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY9183673.1"
                     /translation="MLRQAAEKTGDLVGDGTSTATILAHAIFAEGVRNVAAGASAIDL
                     KRGLERGLEVAVKRLKELAKPVSSRKEKAQVATISAHNDPTIGELIADAMEKVGGDGV
                     ITVEESKTTETMLEVVEGMQFDRGYVSPYFITDPSTMEAVLEDAYVLICDRKLGILKD
                     IIPLLEQVAKSGRPILFIAEDVESEALATLIVNQIRGVLKNVAVKAPGFGDRRKAMLQ
                     DIAALTGAQLISEDLGFKLEDVDLSQLGRARRIVVDKDNTTIIGGAGAKAAIDGRIKM
                     IRTELDKTTSDYDREKLEERLAKLSGGVAVIRCGAPSESEMKAKKDALDDAIASTKAA
                     VAEGIVPGGGLALLRCCPAIEALAEQATGDERTGVQILRRALEVPTRQIAENSAADGG
                     VVVDKMLVSSANVGFDAARKQFVDLYEAGIVDPVKVVRMGLENAVSVASVLLLTEATM
                     TEKPEKREERPPVEPSM"
     gene            complement(1419..1859)
                     /locus_tag="VIQ99_10765"
     CDS             complement(1419..1859)
                     /locus_tag="VIQ99_10765"
                     /inference="COORDINATES: protein motif:HMM:NF012791.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY9183674.1"
                     /translation="MKVVLPFDGSPSAGRAVAYVVDLAARVTKQRITVELINVQDATV
                     DLPGAFVRDAADVAEQLASSALERGGKLLAKPSATLERAGLKARSKVLLGEPADEIAA
                     HVKDTGADAVVMGTRGLGVVGGLVLGSVASKVVHLVKVPVTLVK"
     gene            complement(1914..>2131)
                     /locus_tag="VIQ99_10770"
     CDS             complement(1914..>2131)
                     /locus_tag="VIQ99_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019140193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ion transporter"
                     /protein_id="HEY9183675.1"
                     /translation="ITPKTDLGRFIASIMMLMGWGVLAVPTGIVTAEITTRRLQSAVT
                     RVCNACGAVGHAADAIFCRACGARLST"
BASE COUNT          404 a          698 c          711 g          318 t
ORIGIN      
        1 gatgctgcgc caggccgcgg agaagaccgg cgacctcgtg ggcgacggca ccagcaccgc
       61 gaccatcctc gcccacgcga tcttcgccga gggcgtccgg aacgtggccg ccggagcgag
      121 cgcgatcgat ttgaaacgcg gcctcgagcg cgggctcgag gtggccgtga agaggctcaa
      181 ggagctcgcg aaacccgtca gtagccgcaa agagaaggca caagtcgcga cgatctcggc
      241 gcacaacgat cccacgatcg gcgagctgat cgccgacgcc atggagaagg tcggcggtga
      301 tggcgtcatc actgtcgagg aatcgaaaac gaccgagacg atgctcgagg tcgtcgaggg
      361 catgcagttc gaccgcggct acgtgtcccc gtacttcatc acggatccca gcaccatgga
      421 ggccgtgctc gaggacgcgt acgtgctgat ctgcgaccgc aagctcggca tcctgaagga
      481 catcattccg ttgctcgagc aggtcgcgaa atccggccgg ccgatcttgt tcatcgcgga
      541 ggacgtcgag agcgaggcgc tcgcgacact gatcgtcaac cagattcgcg gcgtgctgaa
      601 gaacgttgcc gtcaaggcgc ccggcttcgg cgaccggcgt aaggcgatgc tacaagacat
      661 cgccgcgctc acgggcgcac agctgatctc cgaggatctc ggcttcaagc tcgaggacgt
      721 cgatctctcg cagctcgggc gcgcgcgccg catcgtcgtc gacaaggaca acacgacgat
      781 catcgggggc gccggcgcga aggccgcgat cgacggtcgc atcaagatga tccgcacgga
      841 gctcgacaag acgacgagcg actacgatcg cgaaaagctc gaggagcggc tcgccaagct
      901 ctcgggcggc gtcgccgtga tccgctgcgg cgcaccgtcg gaatccgaga tgaaggcgaa
      961 gaaggacgcg ctcgacgacg cgatcgcctc gacgaaggcg gccgttgccg agggcatagt
     1021 gccgggcggc ggtctcgcgc tgctacgctg ctgcccggcc atcgaagcac tcgccgagca
     1081 ggcgacgggc gacgagcgca cgggcgtgca gatcctacgc cgcgcgctcg aggtgccgac
     1141 gcggcagatc gcggagaact cggccgccga cggcggcgtc gtagtcgaca agatgctcgt
     1201 gagctcggcg aacgtaggct tcgacgccgc gcgcaagcag ttcgtcgacc tgtacgaggc
     1261 cggcatcgtc gacccggtca aagtcgttcg catgggcctc gagaacgcgg tttcggttgc
     1321 gagcgtgctg ctgctcaccg aggcgacgat gacggagaaa cccgagaaac gcgaggaacg
     1381 accgcccgta gagccgtcga tgtagcgctc gtccccgttt acttgacgag cgtgacgggc
     1441 accttcacta ggtgcactac cttcgaggcg acagagccga gcacgaggcc gccgacgacg
     1501 ccgaggccgc gggtgcccat cacgaccgcg tctgcgccgg tgtccttcac gtgcgccgca
     1561 atctcatcgg ccggctctcc gagcagcacc ttcgatctcg ccttgagccc tgcccgctcc
     1621 agcgtcgccg acggcttggc aagcaacttg cctccacgct ccaaggccga gctcgcaagc
     1681 tgctccgcaa catccgcggc atcacgcacg aacgccccgg gaagatcgac cgtcgcatcc
     1741 tgcacgttga tcagctcgac ggtgatgcgc tgtttggtga cgcgtgcagc gagatcgacg
     1801 acgtaggcga ctgcacggcc cgcggacggt gagccatcga acgggagtac gactttcatg
     1861 ctggaggatc ctcgtcgggt tgaattcggg gtgcattcta gtggaggaag cgcctaggta
     1921 gacagccgtg ccccgcaggc ccggcagaag atagcgtcag ctgcgtgccc cacggcgccg
     1981 cacgcgttgc agacgcgcgt gacggcactc tgcagccgtc gagtcgtgat ctcggccgtc
     2041 acgatgcccg tcggcaccgc cagcacgccc caccccatga gcatcatgat gctcgcgatg
     2101 aagcgcccta gatccgtctt tggtgtgatg t
//
LOCUS       DATCUD010000740         1665 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_42598, whole genome shotgun sequence.
ACCESSION   DATCUD010000740 DATCUD010000000
VERSION     DATCUD010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42598"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..631
                     /locus_tag="VIQ99_10775"
     CDS             <1..631
                     /locus_tag="VIQ99_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HEY9183676.1"
                     /translation="PAIISAVPGIERPTYMLDLGANVGCTPEHLFQFALMGSVVAEDM
                     MDIARPRVGLLNVGLEDIKGNETVREAGELLGNSGLNYVGFVEGDGIFHADVDVVVSD
                     GFVGNVALKTMEGVAKLISSFLKEEFHRTVLRSVQGLVAKSALEALRERLDPRRYNGA
                     SLVGLNGIVLKSHGSADAFAFENAVKAAIVEARKGVPVQIGKLLESRPH"
     gene            632..1597
                     /locus_tag="VIQ99_10780"
     CDS             632..1597
                     /locus_tag="VIQ99_10780"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008932650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY9183677.1"
                     /translation="MYSRIVGTGKYLPERVLTNADLEKMVDTTDEWIRTRTGIEHRHI
                     AADDEATSDLAYKASLVAMKDAGVAPSDIDLVLVGTTTPDLIFPNVACLVQEKLGIRN
                     GGPAFSLEAACSGFVYGLVVADQFIRTGQARRALVIGAETMSRIIDWKDRETCVLFGD
                     GAGAVILEAAEQPGIMYSTLGADGRYRELLYASSGVSTRHRAGSDIAALRMKGNEVFK
                     VAVKTLENLVDDVVKKNNLEKGQIDWLIPHQANIRIISATAKRLQMPMERVVLTVQEH
                     GNTSSASVPMALDTAIRDGRIKRGDLLLLEAFGGGFTWGASLVRY"
BASE COUNT          331 a          492 c          533 g          309 t
ORIGIN      
        1 gcccgcgatc atctcggccg tgcccgggat cgagcgcccg acctatatgc tcgatctcgg
       61 cgccaacgtc ggttgcacgc cggagcatct cttccagttc gcgctgatgg gctccgtcgt
      121 tgccgaggac atgatggaca tagcgcgtcc gcgcgtcggc ctcttgaacg tcggtctcga
      181 ggacatcaag ggtaacgaga ccgtgcgcga ggccggcgag ctgctcggca acagcggtct
      241 gaactacgtc ggtttcgtgg aaggtgacgg catttttcac gccgacgtcg acgtcgtcgt
      301 cagcgacgga ttcgtcggca acgtcgcgtt gaagacgatg gaaggcgtcg ccaagctgat
      361 cagctcgttc ttgaaggagg agtttcatcg cacggtgctc cgcagcgtcc aagggctcgt
      421 cgcgaaatcg gcgctcgagg ctttgcgcga gcggctcgat cctcggcgtt acaacggtgc
      481 gagcctcgta ggactgaacg gcatcgtgct gaagagtcac ggctcggccg acgcttttgc
      541 attcgagaac gccgtcaagg ccgcgatagt cgaagcccgc aagggggtgc ccgtgcagat
      601 cggcaagctt ctcgagagtc ggccgcacta aatgtactcg cgcatcgtcg gcaccggtaa
      661 gtacctgccc gaaagggtcc tcaccaacgc ggacctcgag aagatggtcg atacgaccga
      721 cgagtggatt cgcactcgga ccggtatcga gcatcgccac atcgcggccg acgacgaagc
      781 gactagtgat ctcgcgtaca aagccagcct cgtcgcgatg aaggatgcgg gagtcgcacc
      841 gtccgacatc gatctcgtgc tcgtcggaac cacgacgccg gatctgatct ttccgaacgt
      901 tgcgtgtctc gtgcaggaaa aactcggtat ccggaatggt ggtccggcct tcagtctcga
      961 ggcagcatgc tcgggcttcg tgtacggcct cgtcgtcgcc gaccagttca ttcggaccgg
     1021 acaagcacga cgcgcgctcg tgatcggggc cgagaccatg tcgcggatca tcgattggaa
     1081 ggatcgagag acctgcgtgc tgttcggcga tggggctggc gccgtgatcc tcgaggcggc
     1141 cgagcaaccg ggcatcatgt attcgacgct cggtgccgat gggcgttacc gcgagctgct
     1201 gtatgcctcg agcggtgtat ccacgcgcca tcgcgcgggc tccgacatcg cggcgctgcg
     1261 catgaaaggc aacgaggtat tcaaggtcgc cgtgaagacg ctcgagaacc tcgtcgatga
     1321 cgtcgtgaag aagaacaacc tcgaaaaagg ccagatcgat tggctgatcc cgcaccaagc
     1381 gaacatcagg atcatcagcg cgactgccaa acgtttgcag atgccgatgg aacgagtcgt
     1441 attgaccgtg caagagcacg gcaatacctc gtccgcctcc gtgccaatgg cgctcgacac
     1501 cgcgattcgc gacggacgga tcaaacgcgg cgacctgctg ttgctggaag cgttcggcgg
     1561 gggcttcacc tggggcgcca gcctggtccg ctattgaccg aagaaggatt gccgattagt
     1621 gctcatattc tggacgcaga aagacatata atgcgctgat gtggc
//
LOCUS       DATCUD010000741         1959 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14003, whole genome shotgun sequence.
ACCESSION   DATCUD010000741 DATCUD010000000
VERSION     DATCUD010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1959)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1959)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14003"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1857)
                     /locus_tag="VIQ99_10785"
     CDS             complement(<1..1857)
                     /locus_tag="VIQ99_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019848814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HEY9183678.1"
                     /translation="MTTYSQHFSIRRLWIILASSMVVMFGTLLYYGGQIYLAAPPIPL
                     AVQTNGGETIFTHEQILRGQNVWQSTGGMQQGSVWGHGSYVAPDWSADWLHREALALL
                     DALATAEGRRSYADLTAPDRARLEALLRAEMRANTYDPESEIVTVGADRARAIDVVAA
                     HYSDLFRGTSPEARELREQYAFPVDAVLTAEESEALNAFFFWTAWAATTERPGESITY
                     TSNWPHEPLVGNTPNGAMFLWTFISILVLLGGIGALVWYYAREFDVWRRDGEPQQGFA
                     REDFMATVPLTPSMRATSWYFLVVAALFTVQVLLGIVTAHYAVEGQGLYGLPFTELFP
                     YSVTRTWHTQLAVLWIATAWLGTGLYVAPLLGGREPKLQAAGVWFLLLSLVVIVVGSF
                     AGEWLAINRMIPDAVHNFWFGHQGYEYIDLGRFWQIYLFIGLLLWVALVLRGLRPALA
                     AAQTRSLLFLVIVATVAIGLLFGAGLLYGKDTHLSIMEYWRWWVVHLWVEGVFEVFAT
                     AIVAALFVRMGLVRASVATTSVLVATIIFLGGGVLGTFHHLYWSGTPIGVLAMGSVFS
                     ALEAVPLVVVGFEAYSRAKHEGLFEWQKAYHWAFMFFGAVLVWNLIGAGVFGF"
BASE COUNT          397 a          652 c          627 g          283 t
ORIGIN      
        1 aaagccgaac acgccggcgc cgatcaggtt ccagacgagc acggcgccga agaacatgaa
       61 ggcccagtga taggccttct gccattcgaa aagcccttcg tgtttcgcgc ggctgtaggc
      121 ctcgaagccg acgactacga gcggcactgc ctcgagcgcc gagaacacgc tccccatggc
      181 gagcacgccg atcggtgtgc cgctccaata gaggtgatgg aacgtgccga gcacgccgcc
      241 tcccaagaag atgatcgtcg cgacgagcac cgaggtggtt gcgaccgatg cgcgcacgag
      301 ccccatgcgc acgaacaacg cagccacgat cgcggtcgcg aagacctcga acacgccttc
      361 gacccacaag tgcacgaccc accagcgcca gtactccatg atcgagaggt gcgtgtcttt
      421 gccgtacagc aatcccgcgc cgaacaggag tccgatcgcg acggtcgcga cgatcacgag
      481 gaacaagagc gagcgtgtct gcgcggccgc gagggccggc cgcaagccgc gcagcacgag
      541 cgcgacccac agcaacaagc cgatgaacag gtagatctgc cagaaccgcc cgagatcgat
      601 gtattcgtat ccttgatggc cgaaccagaa gttgtgcacg gcgtccggga tcatccggtt
      661 gatcgcgagc cattcacccg cgaacgagcc cacgacgatc acgacgaggc tcaagagcaa
      721 gaaccaaacg ccggccgctt gcagcttcgg ctcgcgtcct ccgagcagcg gcgcgacgta
      781 gaggccggtg ccaagccagg ccgtcgcgat ccagagcaca gcgagctggg tgtgccaggt
      841 gcgcgtgacg gagtagggga agagctccgt gaagggcagg ccatacagcc cttgaccctc
      901 gacggcgtag tgggccgtca cgatcccaag cagcacctgg accgtgaaca gcgccgcgac
      961 gaccaagaag taccatgagg tggcgcgcat cgacggcgtc agcggcaccg tcgccatgaa
     1021 gtcctcgcgc gcgaagccct gctgcggctc accatcgcgg cgccacacgt cgaactcacg
     1081 agcgtagtac cacacgagcg ctccgattcc gcccagcagc accaagatcg agatgaacgt
     1141 ccagaggaac atcgcgccgt tcggcgtgtt gccgacgagc ggctcgtggg gccaattgct
     1201 cgtgtaggtg atcgactcgc cgggcctctc ggtcgtggcg gcccaggccg tccagaagaa
     1261 aaaggcgttc aaggcctcgg actcttcagc cgtgagcacg gcgtcgaccg ggaacgcgta
     1321 ctgctcgcgc agctctcgcg cttcgggtga cgtgccgcga aacaggtcgg agtagtgcgc
     1381 cgcgacgacg tcgattgcgc gggcgcggtc cgcgccgacc gtcacgatct ccgattccgg
     1441 atcgtaggtg ttcgcgcgca tctcggcgcg cagcagcgcc tcgagccgcg cgcgatccgg
     1501 cgcagtgaga tccgcgtagc tgcgtcgccc ttccgcggtc gcgagcgcgt cgagcaacgc
     1561 gagcgcttcg cgatgcagcc agtcagccga ccagtccggc gccacgtagc tgccgtgacc
     1621 ccagacggat ccttgctgca taccgcccgt cgactgccag acgttttggc cgcgcaggat
     1681 ctgctcgtgc gtgaagatcg tctccccgcc gttggtttgg accgccagcg ggatcggcgg
     1741 cgccgccagg tagatctggc cgccgtagta cagcaaggtg ccgaacatga cgaccatgct
     1801 cgacgccaag atgatccaca agcggcgaat cgagaaatgc tgactgtacg tcgtcaagac
     1861 gacttaccct ctgccggcta cgcgccgatc ttcggcgatc ggaacattgt gtgacaatgc
     1921 ggctttccgc aggaaagccg ccgcgatcag gcggcgaga
//
LOCUS       DATCUD010000742         1501 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14098, whole genome shotgun sequence.
ACCESSION   DATCUD010000742 DATCUD010000000
VERSION     DATCUD010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14098"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1501
                     /locus_tag="VIQ99_10790"
     CDS             <1..>1501
                     /locus_tag="VIQ99_10790"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY9183679.1"
                     /translation="AFFKQELGKSRSVMFLNARDVLVIEHTEMGPVTVWDLSRQKVSA
                     AIPKDFDGIVVITGFVASDKDGLPTTLGRNGSDYSASIFGALLDADEVHIWTDVDGVM
                     SGDPRQVPEAKIIDEMSYSEAMELAYFGAKVIHPQTMAPAVGRGIPLWIRNTFNPTHP
                     GTKISASSGPRAAAVKGISGIDKVALVNLEGAGMIGVPGTADRLFGALRDAQVSVMLI
                     SQGSSEHSICFAVREDVSDQVQSVVERAFAVELSEGQVQRVGVTKGCAIIAVVGDDMA
                     GMPGSAGRFFGTLGNAGINVRAIAQGASERNISAVIDAKDMTRAIRAVHSSFYLSAKT
                     VSIGLLGPGLVGSTLLDQLASAAPALRDKFNLDLRVRAIGGSKKMVLDAQRVALGSWR
                     DALSNGTAMDAEKFVNHVQADHLPHAVLIDCTANQAVADRYADWLRRGIHVITPNKRA
                     HSGPIAYYQDLKRLSRGSRTHFLYEATVGAGLPVIQTLKDLVETGDEIRS"
BASE COUNT          263 a          469 c          502 g          267 t
ORIGIN      
        1 gcgttcttca agcaggagct cggcaagtcc cgcagcgtga tgttcttgaa cgcgcgcgac
       61 gtgctcgtga tcgagcacac cgagatgggc cccgtcacgg tttgggatct gtcgcggcag
      121 aaagtctccg ccgctatccc caaggatttc gacggcatcg tcgtcatcac cggtttcgtc
      181 gcgtccgaca aagacggatt gccgaccacg ctcggccgca acggcagcga ctattcggcg
      241 tcgatcttcg gcgccttgct cgatgccgac gaggtccata tctggaccga cgtcgacggc
      301 gtcatgagcg gggacccgcg gcaagtgccg gaagcgaaga tcatcgacga gatgtcgtac
      361 agcgaggcca tggagctcgc gtacttcggg gccaaggtca ttcatccgca gacgatggcc
      421 cctgccgtcg gccgcggcat tccgctgtgg attcggaaca cgttcaaccc gacgcacccg
      481 gggaccaaga tctccgcgtc gtcgggcccc cgcgcggcgg ccgtcaaggg aatcagcggc
      541 atcgacaaag ttgcgctcgt gaatctcgag ggcgccggta tgatcggcgt gcccggcacc
      601 gcggataggc tgttcggcgc gctgcgcgac gcccaagtgt ccgtgatgtt gatctcgcag
      661 ggcagttccg agcactcgat ctgtttcgcc gtgcgcgaag acgtgtccga tcaggtgcag
      721 agcgtcgtcg agcgagcgtt cgccgtggag ctcagcgagg ggcaggtcca gcgcgtcggc
      781 gtcacgaagg gctgcgcgat catcgccgtg gtcggtgacg acatggccgg catgccgggt
      841 agcgcggggc gattcttcgg cactttgggc aatgccggca tcaacgtgcg agcgatcgcg
      901 cagggcgctt cggagcgcaa tatctcggcc gtcatcgatg cgaaagacat gacgcgtgcg
      961 attcgcgcgg tccacagcag cttctatctc tcggcgaaga cggtctcgat cggtttgctc
     1021 ggtcctgggt tggtcggcag cacgctgctc gatcagctcg cgagcgccgc gccggccttg
     1081 cgtgacaagt tcaatctcga cctccgcgtg cgagccatcg gaggcagcaa gaagatggtg
     1141 ctcgacgcgc agcgagtcgc gttgggctcg tggcgagacg ccttgagcaa cggcacggcg
     1201 atggacgccg agaagttcgt gaaccacgtc caggccgatc acttgccgca cgccgtgttg
     1261 atcgactgca cggccaacca ggccgtggcc gatcgttacg ctgactggct gcggcgcggc
     1321 attcacgtga tcactccgaa caagcgcgcc cacagcgggc cgatcgccta ttaccaggat
     1381 ctgaagcgct tgagccgcgg ctcgcgcacg cactttctgt acgaggctac ggtcggtgcg
     1441 ggtctgcccg tgattcagac tctgaaggat ctcgtcgaaa ccggcgacga gatccggagc
     1501 a
//
LOCUS       DATCUD010000743         3774 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_14117, whole genome shotgun sequence.
ACCESSION   DATCUD010000743 DATCUD010000000
VERSION     DATCUD010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 3774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3774
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14117"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..2670
                     /locus_tag="VIQ99_10795"
     CDS             313..2670
                     /locus_tag="VIQ99_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013668293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY9183680.1"
                     /translation="MLSRISLAVGAVLATATSVPADAQPAGPTPQPAVDDEITVTGAR
                     RREEAVQEVPIPVSVVDGELITDAGAFNVNRIKELIPSVQLYSSNPRNTGVNVRGLGS
                     PFGLTNDGIEPGVGYYVDGVLYARPAATTLDFIDVERVEVLRGPQGTLFGKNTTAGAS
                     LVTTRKPTFIPEYDFELGYGDHSFAQAKGSISGPLGDKVAGRVSFSSTQRDGLLYNVS
                     TQQKINDLDNVGVRTQLLVTPNDRIDLTFALDYTNQEPTGYAQVFAGAVPTQRSAYRQ
                     FETIIADLNYQPPSRDPFDRLIDHDTEWRSGNELGGASANVDIQLGPGTLTSTTAWRY
                     WKWDPSNDRDYLGLPVGTLSQAPSTHDQFTQEIRWAGTLSDKLEGVFGLFAFDQKLNS
                     DPVHTEQAGSALYRFLWTAPNTPAAATSALFDGYTSEITSELNTVSAALFGQLDWAIS
                     ERVHLLPGLRVNYDQKDVDFVRRVSGGPANPTAAELQQLLSVYRPQAFTTDVSDNNVS
                     GQLTLQFAATDRINAYSTYATSFKSIGVNLGGLPLDANNNTILDAAEVAPEDVTHIEV
                     GVKISPTPGSTANFTLFDTHVEDFQTQVNNAQFGVARGYLANADKVRVKGAEFDGNVN
                     IGAAFAVRGSVAYTDAKYVSFIDAPPPLEGTGGPAAVDASGGKLPGISEWAASFGTEY
                     RAQIGAFGGSELFTGVDVYYRDDFSSSATPSAYLNVEGYSIVNLRLGFRANDGGWSGY
                     LWTRNALDEDYFEQLLAAPAGNGAGHYGAVLGDPRTYGVTLRLSF"
     gene            2907..3095
                     /locus_tag="VIQ99_10800"
     CDS             2907..3095
                     /locus_tag="VIQ99_10800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY9183681.1"
                     /translation="MAIYDPMALAQRLSRWWFAPLRLTTSAAEALRAAPSAPAAATKA
                     WLQQTPVGIRTPGHPLFR"
     gene            3260..>3774
                     /locus_tag="VIQ99_10805"
     CDS             3260..>3774
                     /locus_tag="VIQ99_10805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020396826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY9183682.1"
                     /translation="MSLAFQRFDAVELRFCRLLNRSSRSCGVRQLFQVVSRLGDGWIW
                     YALLLALPLLYGQIGFQAMLHAALTGAVGLGLYKLIKNHAVRERPYITHSVIDCATAP
                     LDRYSFPSGHTLHAVCFTVMVSSYFPEWTSPLAAFALLIALSRVILGLHYPTDVAAGA
                     ALGGGLAAGSLL"
BASE COUNT          643 a         1286 c         1212 g          633 t
ORIGIN      
        1 gccttgctcg atgtgcacgg tgacgtcgct gatcgccgtg gcgtcgccgt actccttcga
       61 tacctgctcg agagtgatgg acacagtgcg accgctgccg ggagcccttc agacccggga
      121 tgctacccag ggccggctcg acgtgtcggt ctcaccacgg ttaggccgcg gtgacatttc
      181 ggtttcagcg tcggattgtc acgttcttgg aacctggata cgaccgcgcg cgttacccac
      241 cggaccctac gatgcggccc cgaagcgagc gacacggtcg tcgcagcaca acccggtacc
      301 caggagacag tgatgctcag tcgaatctcg ttggccgtcg gcgcagtctt ggccacagcc
      361 acctccgttc ccgccgacgc gcagccggca ggcccgacac cgcaaccggc cgtcgacgac
      421 gagatcacgg tcaccggcgc gcgtcgccgc gaggaagccg tgcaggaagt gccgataccg
      481 gtgtcggtcg tcgacggcga gctgatcacg gacgccggcg cgttcaacgt caatcggatc
      541 aaggagttga tcccgagcgt gcagctgtat tcgtcgaacc cgcgcaacac cggcgtgaac
      601 gttcgcggcc tgggctcgcc attcggcctc acgaacgacg gcatcgagcc cggcgtcggc
      661 tactacgtcg acggcgtgct gtacgcgcgc ccggccgcga ccacgctgga cttcatcgac
      721 gtcgagcgcg tcgaggtgct gcgcgggccg caaggcacgt tgttcggcaa gaacaccacg
      781 gccggcgcga gcctcgtgac tacgcggaag ccgaccttca ttccagagta cgactttgag
      841 ctcggctatg gcgaccacag cttcgcacaa gccaagggat cgatttccgg accgctcggc
      901 gataaggtcg cgggccgcgt gtcgttctcg agcacgcagc gcgacggctt gctctacaac
      961 gtaagcacgc agcagaagat caacgacctc gacaacgtcg gcgtgcgcac acagctgctc
     1021 gtgacgccga acgatcgcat cgacctcacg ttcgcgctcg actacacgaa ccaggagccc
     1081 accggctacg cgcaggtgtt tgccggcgcg gttccgacgc aacgctccgc gtatcggcag
     1141 ttcgagacga tcatcgcgga tctgaattac caaccgccga gccgcgaccc gttcgatcgg
     1201 ctcatcgatc acgacacgga atggcgctcg ggcaacgagc tcggcggcgc ctcggcgaac
     1261 gtcgacatcc agttggggcc cggcacgttg acgtcgacga ccgcctggcg gtattggaag
     1321 tgggatccgt cgaacgaccg cgactatttg ggcctgcccg tcggcacgct gtcgcaagcg
     1381 ccgtcgactc acgatcagtt cacgcaggag attcgttggg ccggaacgct gtcggacaag
     1441 ctcgagggag tgttcggcct gttcgcattc gatcagaagc tgaactccga tcccgtgcac
     1501 acggagcaag caggctcggc gctgtatcgc ttcctgtgga cggcaccgaa cacgccggcc
     1561 gcggcgacct cggcgctgtt cgacggctac acgagcgaga tcacgtccga gctcaacacc
     1621 gtcagcgcgg cgttgttcgg ccagctcgac tgggcgatca gcgagcgcgt gcacttgcta
     1681 cccggcctgc gcgtgaacta cgaccagaag gacgtcgact tcgtccggcg cgtgtccggc
     1741 ggcccggcga acccgaccgc ggccgagctc cagcagttgc tgagcgtgta ccggccgcag
     1801 gcctttacga ccgacgtcag cgacaacaac gtctccggtc agctcacgct gcagttcgcc
     1861 gcgacggaca ggatcaatgc gtactcgacc tacgcgacca gcttcaagtc gatcggcgtg
     1921 aacctgggcg gcttgccgct cgacgcgaac aacaacacga tcctcgacgc cgccgaggtc
     1981 gctcccgagg atgtgaccca tatcgaggtc ggcgtgaaga tcagccccac gccgggctcg
     2041 acggccaact tcacgttgtt cgacacgcac gtcgaggact tccagacgca ggtcaacaac
     2101 gcgcagttcg gcgtcgcacg cggttacctc gcgaacgccg acaaagtccg ggtaaagggc
     2161 gcggaattcg acggcaacgt gaacatcggc gccgcgttcg ccgtgcgcgg ctcggtcgcc
     2221 tacacggacg ccaagtacgt ctcgttcatc gacgcgccgc cgccgctcga aggcaccggc
     2281 ggtcccgcgg ccgtcgacgc ctcgggcggt aagctgcccg ggatctccga gtgggccgct
     2341 tcgttcggca ccgagtatcg cgcgcagatc ggcgcgttcg gcggctccga gctgttcacc
     2401 ggggtcgacg tctactaccg cgacgatttc tcgtcgagcg cgacgccgtc ggcctacttg
     2461 aacgtcgaag gctactcgat cgtgaacctg cgcctcggct tccgcgccaa cgacggcggc
     2521 tggtcggggt atctgtggac gcgtaacgcg ctcgacgagg actacttcga gcagctgctc
     2581 gcggcgcccg ccggcaacgg cgccggtcac tacggcgcag tgctcggcga cccgcgcacg
     2641 tacggcgtga cgctgcgact gtcgttctag acggagccac ccctgcccat cgcgagcgcg
     2701 tacgagcagc gacacgagct cggtgctcgc ccgactcctt tttgcgacac gttgcgtcgt
     2761 ctcgtcagaa gctcatgcta cgcaccgttt cggcagctag gtttcacgat ccgccacacg
     2821 cgggtcacat ttgcgacggc attcggggcc gtcaccagga ccaagggaac ggttggtcgc
     2881 tggagtgcgc aaggaggaga cgttcgatgg cgatctacga cccgatggca ttggcgcagc
     2941 ggctcagccg ttggtggttc gcgccgttgc gactcacgac gagcgcggca gaagccctgc
     3001 gcgcggcccc gagcgctccc gccgccgcca cgaaagcctg gttgcaacag acgccggtcg
     3061 gaatccgcac gccggggcac ccgcttttcc ggtagcgcgc gcagcggcgt cgacactcgt
     3121 caggccgcgg agcttcgaat ccaaccagcg ccgaatggcg ctgcaagaga accttcatcg
     3181 atccgccatg gatcggtcat gtcgcgggcg catcttgtca cccgtcatac ggagcaagag
     3241 gtgaccgatg gaccggcgtg tgagcttggc gttccagcgc ttcgacgctg tggagctcag
     3301 gttctgccgg ctcctgaatc gttcgagccg ctcctgcgga gtccgccagt tgtttcaggt
     3361 cgtgagccgg ctcggcgacg gctggatctg gtacgcgctg ttgctggcgc tgccgctgct
     3421 gtacggccag atcggcttcc aggcgatgct gcacgccgcg ctcacgggcg cagtcggact
     3481 cgggctgtac aagctgatca agaatcacgc ggtccgcgaa cgaccgtata tcacccactc
     3541 cgtcatcgat tgcgcgacgg cgccgctcga tcgctacagt ttcccgtccg gacatacgct
     3601 gcacgccgtg tgcttcacgg tcatggtgtc gagctacttc cccgagtgga cgagcccgct
     3661 cgcggcgttc gcgctcttga tcgcattgtc acgcgtgatc ctgggcctcc actacccgac
     3721 cgacgtggcc gcgggcgcgg ctctcggcgg cggcctggcg gccggcagcc tgct
//
LOCUS       DATCUD010000744         1645 bp    DNA     linear   ENV 20-FEB-2024
DEFINITION  MAG TPA_asm: Gammaproteobacteria bacterium isolate SMAG_U7348
            k141_63878, whole genome shotgun sequence.
ACCESSION   DATCUD010000744 DATCUD010000000
VERSION     DATCUD010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37955162
            Sequence Read Archive: SRR2070858
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Gammaproteobacteria bacterium (soil metagenome)
  ORGANISM  Gammaproteobacteria bacterium
            Bacteria; Pseudomonadota; Gammaproteobacteria.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 18:11:37
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,162
            CDSs (total)                      :: 2,147
            Genes (coding)                    :: 2,137
            CDSs (with protein)               :: 2,137
            Genes (RNA)                       :: 15
            tRNAs                             :: 13
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 10
            CDSs (without protein)            :: 10
            Pseudo Genes (ambiguous residues) :: 0 of 10
            Pseudo Genes (frameshifted)       :: 3 of 10
            Pseudo Genes (incomplete)         :: 6 of 10
            Pseudo Genes (internal stop)      :: 2 of 10
            Pseudo Genes (multiple problems)  :: 1 of 10
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Gammaproteobacteria bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63878"
                     /isolate="SMAG_U7348"
                     /isolation_source="soil"
                     /db_xref="taxon:1913989"
                     /environmental_sample
                     /country="Viet Nam"
                     /lat_lon="21.088732 N 105.733872 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1645
                     /locus_tag="VIQ99_10810"
     CDS             <1..>1645
                     /locus_tag="VIQ99_10810"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY9183683.1"
                     /translation="HVRLPGMLHARTLRPPVANAVPVRVDEGSIAGVAKPKNPGDYRV
                     VGTPVPRKDVAGKVLATTEFCHHVRLPGMLHARTLRPPVANAVPVRVDEGSIASIPGA
                     RVVRKGDFIAVIAPNEWHAIKAARDLRVTWSDTAPPFPRADALFDHIRRAPVASDSSR
                     GGFGGAGAPIDTAPALAAIAAAPRRIEAEYEVPFQSHARMGPSIGVADVRDGSAMVYS
                     DTQKSHDTRDGIAKILGLPPDKVRVIWKPGPGSYGRSDADEAAFEAAVISQIVAAPVR
                     VQWMRNEGHAWDPKAPACVISCKAGLSADNEIAAWYFRAKGFSGWDVMFNASDPKDTL
                     VGQLVGFPKGDSHNFGTPAESYAFPNAVKYWETIPPLLARASPLRCAHMRAPQEPQLH
                     FAHECFIDEVAAAAGVDPIALRLKHLTDEREIEVLEAVARASSWQSRPSPAATRSGNV
                     LRGRGVAINSGFGGYVATVCEVEVDRSTGRVWPRRFVVAHDCGLIINPRGLHGTIEGN
                     VVQGVSRTLFEEVRFDERGVNSVDWATYPILEVGDAPESI"
BASE COUNT          254 a          561 c          585 g          245 t
ORIGIN      
        1 ccacgtgcgc ctgcccggca tgctgcatgc gcgcaccctg cggccgccgg tcgcgaacgc
       61 ggtgccggtg cgcgtcgacg agggctcgat cgcgggcgtc gccaagccga agaaccctgg
      121 cgactatcgc gtcgtcggca cgccggtgcc gcgcaaggac gtcgcgggca aggtgctcgc
      181 gaccacggaa ttctgtcacc acgtgcgcct gcccggcatg ttgcatgcgc gcacgctgcg
      241 gccgcccgtc gcgaacgcgg tccctgtgcg cgtcgacgag ggttcgatcg cttcgattcc
      301 cggcgcacgc gtcgtgcgca agggcgactt catcgcggtg atcgcgccga acgaatggca
      361 tgcgatcaag gccgctcgcg acctacgcgt gacgtggagc gacacggctc cgccgtttcc
      421 gcgcgccgac gcgctgttcg atcacatccg ccgcgcgccg gtcgcctccg acagctcccg
      481 tggcggcttc ggcggtgccg gtgcaccgat cgacacggcg cccgccctgg ccgcgatcgc
      541 cgcggcgccg cgccggatcg aggccgagta cgaagttccg tttcaatcgc acgcccggat
      601 gggtccgtcg atcggcgtgg ccgacgtgcg cgacggctcg gcgatggtgt actcggacac
      661 gcagaagtcg cacgacacgc gcgacggcat cgcgaagata ctcggcttgc cgcccgacaa
      721 agtccgcgtg atctggaaac cgggacccgg atcgtacggg cgcagcgacg cggacgaagc
      781 cgcgttcgag gcggccgtga tctcgcagat cgtcgcggcg cccgtccgcg tgcaatggat
      841 gcgcaacgaa ggccacgcct gggatccgaa agcgcccgcg tgcgtgatca gctgcaaggc
      901 gggcctgagc gccgacaacg agatcgcggc ctggtatttc cgcgcgaagg ggttctcggg
      961 ctgggacgtg atgttcaacg cgtcggatcc gaaggacacg cttgtggggc agctggtcgg
     1021 cttcccgaag ggcgattcgc acaacttcgg cacgccggcc gagtcgtacg cattcccgaa
     1081 cgcggtgaag tactgggaga cgatcccgcc gttgctggcg cgggcttcgc cgctgcggtg
     1141 cgcgcacatg cgcgcgccgc aggaaccgca gctgcacttc gctcacgagt gtttcatcga
     1201 cgaagtcgcc gccgcggccg gcgtcgatcc gatcgcgttg cgcctgaagc atttgaccga
     1261 cgagcgcgag atcgaggtgc tcgaggccgt ggcacgcgcg tcgagctggc agagccgccc
     1321 gtctcccgcc gcaacgcgaa gcggtaacgt gctgcgcggc cgcggcgtcg cgatcaacag
     1381 cggcttcggc ggctacgtcg cgaccgtgtg cgaggtcgag gtcgatcgaa gcacgggacg
     1441 cgtctggccg cggcgcttcg tcgtcgcgca cgactgcggg ctcatcatca acccgcgcgg
     1501 gttgcacggc acgatcgaag gcaacgtcgt gcaaggcgtc agccgcacgt tgttcgagga
     1561 ggtgcgcttc gacgagcgcg gcgtgaatag cgtcgactgg gccacgtatc cgatactcga
     1621 agtcggcgac gcgcccgaga gcatc
//
